Citrus Sinensis ID: 018750
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 351 | 2.2.26 [Sep-21-2011] | |||||||
| B7KWT4 | 260 | Putative aminoacrylate hy | yes | no | 0.601 | 0.811 | 0.272 | 9e-11 | |
| O06420 | 262 | Putative non-heme bromope | yes | no | 0.621 | 0.832 | 0.280 | 2e-10 | |
| Q6Q2C2 | 555 | Bifunctional epoxide hydr | yes | no | 0.321 | 0.203 | 0.294 | 5e-10 | |
| B0SW62 | 268 | Putative aminoacrylate hy | yes | no | 0.698 | 0.914 | 0.269 | 1e-09 | |
| B1ZB18 | 260 | Putative aminoacrylate hy | yes | no | 0.689 | 0.930 | 0.244 | 2e-09 | |
| P34913 | 555 | Bifunctional epoxide hydr | yes | no | 0.319 | 0.201 | 0.296 | 2e-09 | |
| C7CM33 | 260 | Putative aminoacrylate hy | yes | no | 0.609 | 0.823 | 0.255 | 3e-09 | |
| P27747 | 374 | Dihydrolipoyllysine-resid | no | no | 0.333 | 0.312 | 0.359 | 5e-09 | |
| A8IAD8 | 265 | Putative aminoacrylate hy | no | no | 0.304 | 0.403 | 0.300 | 1e-08 | |
| P34914 | 554 | Bifunctional epoxide hydr | yes | no | 0.321 | 0.203 | 0.286 | 2e-08 |
| >sp|B7KWT4|RUTD_METC4 Putative aminoacrylate hydrolase RutD OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
V +D+RG GRS P++ + MA+DV+AL+DHLG A + GH++G +IA +LA
Sbjct: 42 FRVVTYDHRGTGRSPSPLEPG-HDIAAMARDVLALLDHLGIGTADIVGHALGGLIALQLA 100
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PERV + ++N G+ + + R PE Y +L
Sbjct: 101 LTHPERVGRIVVIN----GWAAMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWL 156
Query: 206 EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265
E ++A Q+ F G A + ++T ++T + L
Sbjct: 157 SENAAR--------------VAADEAQALAHFPGTRTA--LARITA--LETFDATAALGR 198
Query: 266 VIH------GRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLI 318
+ H R DV+ + LA L P AR+ P GGH S R E N+ L+D +
Sbjct: 199 IPHETLLMAARDDVLVPFTASDVLAAGL-PNARLDLAPEGGHAHSVTRPEAFNRTLLDFL 257
Query: 319 KA 320
+
Sbjct: 258 AS 259
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) (taxid: 440085) EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: - |
| >sp|O06420|BPOC_MYCTU Putative non-heme bromoperoxidase BpoC OS=Mycobacterium tuberculosis GN=bpoC PE=1 SV=1 | Back alignment and function description |
|---|
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 24/242 (9%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG FDNRG+G + +TT+ M D AL++ L A V G SMGA IA
Sbjct: 38 AAGYRCITFDNRGIGATE---NAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQ 94
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF-RAKTPEKRAAVDLDTHYS 201
+L + PE V S L+ G +LD A +FF +A+ + V L Y
Sbjct: 95 ELMVVAPELVSSAVLMATRG-------RLDR-----ARQFFNKAEAELYDSGVQLPPTYD 142
Query: 202 --QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
LE + + + +++ S ++S G Q+ T + + R+
Sbjct: 143 ARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA---PQTNR-LPAYRN 198
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLI 318
V VI DV+ R +A+ L P R + +P GHL ER E VN A++
Sbjct: 199 IAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFF 257
Query: 319 KA 320
+
Sbjct: 258 AS 259
|
Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 |
| >sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
G+++ + G GP V L G + +W Q+ LA
Sbjct: 247 GVRLHFVEMGSGPA-VCLCHGFPESWFSWRYQIPALAQ---------------------- 283
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V A D +G G SS P + EY+ +++ KD++ ++ LG QA GH G ++
Sbjct: 284 AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWN 343
Query: 144 LAAMVPERVLSLALLN 159
+A PERV ++A LN
Sbjct: 344 MALFYPERVRAVASLN 359
|
Acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. Has low phosphatase activity. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 0 |
| >sp|B0SW62|RUTD_CAUSK Putative aminoacrylate hydrolase RutD OS=Caulobacter sp. (strain K31) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 125/304 (41%), Gaps = 59/304 (19%)
Query: 27 IFYRTYGRGPTK----VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+++ +G GP VIL GL G+ W PQ++ L
Sbjct: 9 LYHEVHG-GPASDRQTVILSAGLGGSGTFWAPQMQALMSR-------------------- 47
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
V +D+RG GRS+ + +T M D++ LMD LG ++AHV GH+ G
Sbjct: 48 ---FRVVLYDHRGTGRSARTLTD-PHTVAAMGDDIVKLMDALGLERAHVVGHAAGGNAGL 103
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT---- 198
LA P+R+ L ++N G + P + R F + R A+ DT
Sbjct: 104 ALALNHPDRLDKLVVVN---GWSRPDPHIK--------RCF-----DTRLALLNDTGIAA 147
Query: 199 --HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256
H +L S A L E V I+ G S +I A + +D++T
Sbjct: 148 YVHAQPLFLYPADWLSANNARLEAEEVHHIN--GFPSPDVMRTRIQALLEFDI-DEDLET 204
Query: 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALI 315
IR V V D++ + +RRLAE+L P A + P GGH + E N A++
Sbjct: 205 IRCP---VLVSASADDMLVPLSCSRRLAERL-PNATLDIAPWGGHGFTVTAPEAFNAAVL 260
Query: 316 DLIK 319
+ +
Sbjct: 261 NFLS 264
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Caulobacter sp. (strain K31) (taxid: 366602) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|B1ZB18|RUTD_METPB Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 48/290 (16%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G V+L GL G+ + PQ+ LA V +D+R
Sbjct: 14 GARTVLLSPGLGGSAHYFAPQVPALAER-----------------------FRVVTYDHR 50
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154
G GRS P++ + MA+DV+AL+DHLG + GH++G +IA LA PERV
Sbjct: 51 GTGRSPGPLEPG-HDIAAMARDVLALLDHLGIGTTDIVGHALGGLIALHLALTHPERVER 109
Query: 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEE---YVGS 211
+ ++N G+ + S PE Y +L E V
Sbjct: 110 IVVIN----GWAVMDPATRRCFSARKALLTQAGPEAFVRAQAIFLYPAPWLSENAARVAD 165
Query: 212 STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271
+A+ + K + A + + FD + ++ + + ++ R
Sbjct: 166 DEAQALAHFPGAKTVLAR-IAALEAFDAT---AALARIPHETL-----------LMAARD 210
Query: 272 DVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLIKA 320
DV+ + LA L P AR+ P GGH S R + N+ L+D + +
Sbjct: 211 DVLVPFTASDALAAGL-PNARLDLAPEGGHAHSVTRPDAFNRTLLDFLAS 259
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) (taxid: 441620) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 23/135 (17%)
Query: 25 IKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84
+++ + G GP V L G + +W Q+ LA A
Sbjct: 248 VRLHFVELGSGPA-VCLCHGFPESWYSWRYQIPALAQ----------------------A 284
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
G V A D +G G SS P + EY +++ K+++ +D LG QA GH G M+ +
Sbjct: 285 GYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYM 344
Query: 145 AAMVPERVLSLALLN 159
A PERV ++A LN
Sbjct: 345 ALFYPERVRAVASLN 359
|
Acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. Has low phosphatase activity. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 0 |
| >sp|C7CM33|RUTD_METED Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
V +D+RG GRS P++ + MA+DV+ L+DHLG A + GH++G +IA +LA
Sbjct: 42 FRVVTYDHRGTGRSPGPLEPG-HDIAAMARDVLDLLDHLGIGTADIVGHALGGLIALQLA 100
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PERV + ++N G+ + + R PE Y +L
Sbjct: 101 LTHPERVGRIVVIN----GWAVMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWL 156
Query: 206 EE---YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
E V + +A+ + + + A + + FDG + ++ + +
Sbjct: 157 SENAARVANDEAQALAHFPGEETVLAR-ISALEAFDGT---AALARIPHETL-------- 204
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLIKA 320
++ R DV+ + LA L P AR+ P GGH S R+ N+ L+D + +
Sbjct: 205 ---LMAARDDVLVPFTASDILAAGL-PNARLDLAPEGGHAHSVTRSASFNRTLLDFLAS 259
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Methylobacterium extorquens (strain DSM 5838 / DM4) (taxid: 661410) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P27747|ACOC_CUPNH Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoC PE=1 SV=3 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+GI++ Y G G V+ I G G D W L LA D T
Sbjct: 122 DGIRVRYARKGGGAETVLFIHGFGGDLDNWLFNLDPLA-------DAYT----------- 163
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
V A D G G+SS + T T MA V MD G + AHV GHSMG +A
Sbjct: 164 -----VVALDLPGHGQSSPRLAGT--TLAQMAGFVARFMDETGIEAAHVVGHSMGGGVAA 216
Query: 143 KLAAMVPERVLSLALLNVTGGG 164
+LA P+RVLS+AL++ G G
Sbjct: 217 QLAVDAPQRVLSVALVSPVGFG 238
|
Dihydrolipoamide acetyltransferase involved in acetoin catabolism. Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|A8IAD8|RUTD_AZOC5 Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 26/133 (19%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
++Y +G G T ++L G+ G W PQ++ LA +
Sbjct: 11 LYYEIHGAG-TPILLSAGMGGGAGFWRPQIEALAARHQ---------------------- 47
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
V +D+ G GRS + T MA+D+ ++D G + AHV GH++G +I +LA
Sbjct: 48 -VILYDHAGTGRSGRDIGPRSITE--MARDMARVLDAAGVEDAHVAGHAIGGIIGMELAL 104
Query: 147 MVPERVLSLALLN 159
PERV SL ++N
Sbjct: 105 AAPERVRSLTIVN 117
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) (taxid: 438753) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P34914|HYES_MOUSE Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
GI++ + G GP + L G + +W Q+ LA
Sbjct: 245 GIRLHFVEMGSGPA-LCLCHGFPESWFSWRYQIPALAQ---------------------- 281
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V A D +G G SS P + EY +++ K+++ +D LG QA GH ++
Sbjct: 282 AGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWN 341
Query: 144 LAAMVPERVLSLALLN 159
+A PERV ++A LN
Sbjct: 342 MALFYPERVRAVASLN 357
|
Acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. Has phosphatase activity. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 351 | ||||||
| 255561848 | 400 | carboxylesterase np, putative [Ricinus c | 0.945 | 0.83 | 0.766 | 1e-151 | |
| 224120854 | 413 | predicted protein [Populus trichocarpa] | 0.957 | 0.813 | 0.730 | 1e-147 | |
| 224132738 | 407 | predicted protein [Populus trichocarpa] | 0.962 | 0.830 | 0.715 | 1e-147 | |
| 297796137 | 396 | hydrolase, alpha/beta fold family protei | 0.920 | 0.815 | 0.75 | 1e-146 | |
| 449456391 | 402 | PREDICTED: putative aminoacrylate hydrol | 0.954 | 0.833 | 0.735 | 1e-146 | |
| 449497355 | 402 | PREDICTED: putative aminoacrylate hydrol | 0.954 | 0.833 | 0.732 | 1e-145 | |
| 297789490 | 393 | hydrolase, alpha/beta fold family protei | 0.948 | 0.847 | 0.711 | 1e-145 | |
| 356552821 | 398 | PREDICTED: putative aminoacrylate hydrol | 0.937 | 0.826 | 0.742 | 1e-145 | |
| 225455348 | 403 | PREDICTED: putative aminoacrylate hydrol | 0.951 | 0.828 | 0.722 | 1e-144 | |
| 356571350 | 405 | PREDICTED: putative aminoacrylate hydrol | 0.957 | 0.829 | 0.739 | 1e-143 |
| >gi|255561848|ref|XP_002521933.1| carboxylesterase np, putative [Ricinus communis] gi|223538858|gb|EEF40457.1| carboxylesterase np, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/339 (76%), Positives = 291/339 (85%), Gaps = 7/339 (2%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C+V Q D A N NG++IFYRTYG GPTKV+LI GLAGTHD+WGPQ+KGL
Sbjct: 1 MPFCKV---STQQPNSDGACN-NGVEIFYRTYGYGPTKVLLIIGLAGTHDSWGPQIKGLT 56
Query: 61 GTDKPNDDDETILQDSVESGDGG--AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118
GTD+PNDDDE + D SGD GI+VCAFDNRGMGRSSVP KK++YTTKIMAKD I
Sbjct: 57 GTDRPNDDDELMTVDR-NSGDNDIDCGIQVCAFDNRGMGRSSVPTKKSQYTTKIMAKDAI 115
Query: 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178
AL+DHLGW +AHVFGHSMGAMIACKLAAMVP+RVLSLALLNVTGGGFQC PKLD QT+S+
Sbjct: 116 ALLDHLGWTKAHVFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFQCLPKLDRQTVSV 175
Query: 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
AIRF +AKTPE+RAAVDLDTHY++EYLEEYVG TRRAILYQEYVKGIS+TGMQSNYGFD
Sbjct: 176 AIRFLKAKTPEQRAAVDLDTHYTKEYLEEYVGCKTRRAILYQEYVKGISSTGMQSNYGFD 235
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298
GQI+ACW HKMT+ +I+ IRSAGFLVSVIHGR+D+IAQI YARRLAE+L PVARMIDL G
Sbjct: 236 GQINACWTHKMTRTEIEVIRSAGFLVSVIHGRNDIIAQIYYARRLAERLQPVARMIDLHG 295
Query: 299 GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTS 337
GHLVSHERTEEVNQAL DLI +E KI P DW NLPQ +
Sbjct: 296 GHLVSHERTEEVNQALHDLITTTETKIRPHDWNNLPQKT 334
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120854|ref|XP_002318435.1| predicted protein [Populus trichocarpa] gi|222859108|gb|EEE96655.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/349 (73%), Positives = 300/349 (85%), Gaps = 13/349 (3%)
Query: 1 MPYCEVVGGKEQSAAPD------AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGP 54
MP+CEV K+Q++ D ++ N+ GIKIFY+TYG GPTKV+LI GLAGTHD+WGP
Sbjct: 1 MPFCEV--AKQQTSLDDTVDAASSSNNNKGIKIFYKTYGHGPTKVLLIIGLAGTHDSWGP 58
Query: 55 QLKGLAGTDKPNDDD-----ETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109
Q+KGL GT++ NDDD + DS G GG GI+VCAFDNRGMGRSSVP KK+EYT
Sbjct: 59 QIKGLTGTERSNDDDRMRAIDPNSSDSGGCGYGGNGIQVCAFDNRGMGRSSVPTKKSEYT 118
Query: 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169
TKIMAKD IALMDHLGW++AH+FGHSMGAMIACKLAAMVP+RVLSLALLNVTGGGF+C P
Sbjct: 119 TKIMAKDAIALMDHLGWRKAHIFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFECLP 178
Query: 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT 229
KLD +T+S+AIRF +AKTPE+RAAVDLDTHY++EYL+E+VGSSTRRAILYQEYVKGIS+T
Sbjct: 179 KLDSRTISVAIRFLKAKTPEQRAAVDLDTHYTKEYLDEHVGSSTRRAILYQEYVKGISST 238
Query: 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP 289
GMQS+YGFDGQ++ACW HKMT+ +I+ IRSAGFLVSVIHGRHD+IAQI YARRLA+KL P
Sbjct: 239 GMQSSYGFDGQVNACWTHKMTRTEIELIRSAGFLVSVIHGRHDIIAQIYYARRLAKKLQP 298
Query: 290 VARMIDLPGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
AR++DL GGHLVSHERTEEVNQAL DLI AS+KK++P WTN P+ SS
Sbjct: 299 FARLVDLHGGHLVSHERTEEVNQALCDLISASDKKMNPHVWTNFPKESS 347
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132738|ref|XP_002321397.1| predicted protein [Populus trichocarpa] gi|222868393|gb|EEF05524.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/348 (71%), Positives = 295/348 (84%), Gaps = 10/348 (2%)
Query: 1 MPYCEVVGGKEQ------SAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGP 54
MP+CEV + +A+P + N+NGIKIFYRT+G G TKV+LI G AGT+D+WGP
Sbjct: 1 MPFCEVAKHQASLYDGVDAASPSRSNNNNGIKIFYRTHGHGTTKVLLIIGFAGTNDSWGP 60
Query: 55 QLKGLAGTDKPNDDD--ETILQ--DSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110
Q+K L G ++ NDDD + Q D+ E G GG+G++VCAFDNRGMGRSSVP K +EY+T
Sbjct: 61 QIKALTGKERSNDDDGMRGVDQSDDNGEDGYGGSGVQVCAFDNRGMGRSSVPTKNSEYST 120
Query: 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170
KIMAKD IALMDHLGW++AHVFGHSMGAMIACKLAAMVP+RVLSLALLNVTGGGF+C PK
Sbjct: 121 KIMAKDAIALMDHLGWRKAHVFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFECLPK 180
Query: 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG 230
LD QT+S+AIRF +AKTPE+RAAVDLDTHY++EYL+EYVGSSTRRAILYQEYVKGIS+TG
Sbjct: 181 LDRQTISVAIRFLKAKTPEQRAAVDLDTHYTKEYLDEYVGSSTRRAILYQEYVKGISSTG 240
Query: 231 MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV 290
MQS+YGFDGQ++ACW HKMT+ + + IRSAGFLVSVIHGRHD+IA I YARRLAEKL PV
Sbjct: 241 MQSSYGFDGQVNACWTHKMTRTETELIRSAGFLVSVIHGRHDIIAPIYYARRLAEKLQPV 300
Query: 291 ARMIDLPGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
ARM+DL GGHLVSHERT+EVNQ L +LI A+E K+SP DW+N P+ SS
Sbjct: 301 ARMVDLHGGHLVSHERTKEVNQVLHELINATETKMSPHDWSNFPRKSS 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796137|ref|XP_002865953.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] gi|297311788|gb|EFH42212.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/336 (75%), Positives = 289/336 (86%), Gaps = 13/336 (3%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+CEVV ++ P+ LN+ IKIFYRTYG GP K +LI GLAGTH++WGPQ+ GL
Sbjct: 1 MPFCEVV---KEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLT 57
Query: 61 GTDKPNDDDET---ILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117
GTDKPNDDDE I+ D G+GIEVCAFDNRGMGRSSVP K+EYTT IMA D
Sbjct: 58 GTDKPNDDDEDDGGIVSD-------GSGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDS 110
Query: 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177
I+L+DHLGWK+AH+ GHSMGAMIACKLAAMVPERVLSLALLNVTGGGF+C PKLD Q+LS
Sbjct: 111 ISLLDHLGWKRAHIIGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFECFPKLDRQSLS 170
Query: 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237
IAIRF +AKTPE+RAAVDLDTHYS++YLEE VG++TRRAILYQ+YVKGIS TGMQS YGF
Sbjct: 171 IAIRFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGF 230
Query: 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP 297
DGQI+ACW+HK+T+ +I+ IRSAGFLVSVIHGRHDVIAQICYARRLA++LYPVARM+DL
Sbjct: 231 DGQINACWLHKITKPEIEVIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLH 290
Query: 298 GGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNL 333
GGHLVSHERTEEVN+AL++LIKASE K P DWTNL
Sbjct: 291 GGHLVSHERTEEVNKALLELIKASEMKKRPTDWTNL 326
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449456391|ref|XP_004145933.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/340 (73%), Positives = 287/340 (84%), Gaps = 5/340 (1%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+ EV +AA D +N + IKIFYRTYGRG TKV+LI GLAGTHD+WGPQ+KGL
Sbjct: 1 MPFIEV--NTSSTAAEDVKIN-SAIKIFYRTYGRGSTKVLLIIGLAGTHDSWGPQIKGLT 57
Query: 61 GTDKPNDDDETILQDSVE--SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118
GTD PNDD + E + + G GIEVCAFDNRGMGRSSVP KK+EYTTKIMAKD I
Sbjct: 58 GTDVPNDDGDRNAAHVGEEPTFEDGGGIEVCAFDNRGMGRSSVPTKKSEYTTKIMAKDAI 117
Query: 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178
AL+DHLGW++AH+FGHSMG MIACKL AM PERV SLA+LNVTGGGFQCCPKLD QT I
Sbjct: 118 ALLDHLGWEKAHIFGHSMGGMIACKLGAMAPERVKSLAMLNVTGGGFQCCPKLDRQTFDI 177
Query: 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
A+RF +AKTPE+RA+VDLDTHYS+EYLEEYVG RR +LY+EYV+GISATGMQSN GF
Sbjct: 178 AVRFMKAKTPEQRASVDLDTHYSKEYLEEYVGFEKRRTLLYREYVEGISATGMQSNDGFA 237
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298
GQ++ACW H++T+KDI+ ++SAGFLVSVIHGRHDVIAQ+ YARRLAEKLYPVARM+DL G
Sbjct: 238 GQVNACWTHQVTRKDIECLQSAGFLVSVIHGRHDVIAQMYYARRLAEKLYPVARMVDLHG 297
Query: 299 GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
GHLVS ERTEEVNQAL+DLIKASE K+SP DWTNLP+ SS
Sbjct: 298 GHLVSRERTEEVNQALLDLIKASETKMSPHDWTNLPKKSS 337
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449497355|ref|XP_004160379.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/340 (73%), Positives = 287/340 (84%), Gaps = 5/340 (1%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+ EV +AA D +N + IKIFYRTYGRG TKV+LI GLAGTHD+WGPQ+KGL
Sbjct: 1 MPFIEV--NTSSTAAEDVKIN-SAIKIFYRTYGRGSTKVLLIIGLAGTHDSWGPQIKGLT 57
Query: 61 GTDKPNDDDETILQDSVE--SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118
GTD PNDD + E + + G GIEVCAFDNRGMGRSSVP KK+EYTTKIMAKD I
Sbjct: 58 GTDVPNDDGDRNAAHVGEEPTFEDGGGIEVCAFDNRGMGRSSVPTKKSEYTTKIMAKDAI 117
Query: 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178
AL+DHLGW++AH+FGHSMG MIACKL AM PERV SLA+LNVTGGGFQCCPKLD QT I
Sbjct: 118 ALLDHLGWEKAHIFGHSMGGMIACKLGAMAPERVKSLAMLNVTGGGFQCCPKLDRQTFDI 177
Query: 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
A+RF +AKTPE+RA+VDLDTHYS+EYLEEYVG RR +LY+EYV+GISATGMQSN GF
Sbjct: 178 AVRFMKAKTPEQRASVDLDTHYSKEYLEEYVGFEKRRTLLYREYVEGISATGMQSNDGFA 237
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298
GQ++ACW H++T+KDI+ ++SAGFLVSVIHGRHDVIAQ+ YARRLAEKLYPVARM+DL G
Sbjct: 238 GQVNACWTHQVTRKDIECLQSAGFLVSVIHGRHDVIAQMYYARRLAEKLYPVARMVDLHG 297
Query: 299 GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
GHLVS ERTEEVNQAL+DLI+ASE K+SP DWTNLP+ SS
Sbjct: 298 GHLVSRERTEEVNQALLDLIRASETKMSPHDWTNLPKKSS 337
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297789490|ref|XP_002862707.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] gi|297308385|gb|EFH38965.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/347 (71%), Positives = 289/347 (83%), Gaps = 14/347 (4%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+CEVV ++ P+ LN+ IK+FYRTYG GP K +LI GLAGTH++WGPQ+ GL
Sbjct: 1 MPFCEVV---KEDVGPETTLNNAAIKLFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLT 57
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
GTDKPND D I+ D +GIEVCAFDNRGMGRSS+P K+EY+T IMA D I L
Sbjct: 58 GTDKPNDVDGGIVSDD-------SGIEVCAFDNRGMGRSSIPTHKSEYSTTIMANDSINL 110
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AH+ GHSMGAMIACKLAAMVPERVLSLALLNVTGGGF+C PKLD Q+LSIAI
Sbjct: 111 LDHLGWKRAHIIGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFECFPKLDRQSLSIAI 170
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYS++YLEE VG++TRRAILYQ+YVKGIS TGMQS YGFDGQ
Sbjct: 171 RFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQ 230
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
I+ CW+HK+T+ +I IRSAGFLVSVIHGRHDVIAQICYARRLA++LYPVARM+DL GGH
Sbjct: 231 INTCWLHKITKPEIVVIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLHGGH 290
Query: 301 LVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSVLCQGFWRK 347
LVSHERTEEVN+AL++LIKASE K P DWTNL + G+++K
Sbjct: 291 LVSHERTEEVNKALLELIKASEMKKIPTDWTNLTMETP----GYFKK 333
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552821|ref|XP_003544761.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/338 (74%), Positives = 288/338 (85%), Gaps = 9/338 (2%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C V G + S D LN N IKIFYRTYG GPTKV+LI GLA TH+AWGPQ+KGL
Sbjct: 1 MPFCNV-GTQLPSPVADVPLN-NDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLT 58
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
G P+D + S E G+GG I VCAFDNRG+GRSSVPV+K+E++TKIMAKD IAL
Sbjct: 59 GATVPDD-----VVWSEEEGNGG--IHVCAFDNRGVGRSSVPVEKSEFSTKIMAKDAIAL 111
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AHVFGHSMGAMIACK+AAMVP+RVLSLALLNVTGGGFQC PKLD QT+S+A
Sbjct: 112 LDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQQTISVAY 171
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYSQEYLEEYVG+ RRAILYQ+YVKGIS TGMQSNYGFDGQ
Sbjct: 172 RFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQ 231
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
++ACW HKMT+ +I+ I+SAGFLVSVIHGRHD+IAQI YA+RLAEKL+PVARM+DL GGH
Sbjct: 232 LNACWAHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAEKLHPVARMVDLHGGH 291
Query: 301 LVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
LVSHER+EEVNQAL DLIKAS+ +SP DWTNLP+ S
Sbjct: 292 LVSHERSEEVNQALFDLIKASKVNMSPHDWTNLPKKES 329
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455348|ref|XP_002276809.1| PREDICTED: putative aminoacrylate hydrolase RutD [Vitis vinifera] gi|302143917|emb|CBI23022.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/342 (72%), Positives = 293/342 (85%), Gaps = 8/342 (2%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C V G Q+A +NGI I+YRTYG GP KV+LI GLAGTHD+WGPQ++GL
Sbjct: 1 MPFCRV--GHYQNAGDTGG--NNGIGIYYRTYGHGPIKVLLIIGLAGTHDSWGPQIRGLT 56
Query: 61 GTDKPNDDDETIL--QDSVESGDGG--AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116
GT+ PNDDD++ + E GDGG GIEVCAFDNRGMG+S VP KK+EYTTKIMAKD
Sbjct: 57 GTETPNDDDDSGADGRGPGEDGDGGCNGGIEVCAFDNRGMGQSFVPTKKSEYTTKIMAKD 116
Query: 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176
IALMDHLGW++AH+FGHSMGAMIACKLAA VP+RVLSLALLNVTGGGF+C PKLD +TL
Sbjct: 117 AIALMDHLGWRKAHIFGHSMGAMIACKLAATVPDRVLSLALLNVTGGGFECFPKLDRKTL 176
Query: 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236
SIAIRF +AKTPE+RAAVDLDTHY++EYLEE++G +TRR ILYQEYVKGIS+TGMQSN+G
Sbjct: 177 SIAIRFLKAKTPEQRAAVDLDTHYTEEYLEEFIGPNTRRDILYQEYVKGISSTGMQSNHG 236
Query: 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL 296
F+GQI+ACW HKMT+ +++ IR+AGFL+SVIHGR+D+IAQIC+ARRLAEKL P A+MI+L
Sbjct: 237 FEGQINACWTHKMTKAELELIRTAGFLISVIHGRYDIIAQICHARRLAEKLQPCAKMIEL 296
Query: 297 PGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
GGHLVSHERTEEVNQAL++LI ASE KISP DWTNL + +S
Sbjct: 297 HGGHLVSHERTEEVNQALLELINASETKISPHDWTNLTKETS 338
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571350|ref|XP_003553841.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/338 (73%), Positives = 286/338 (84%), Gaps = 2/338 (0%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C VG + S DA LN N IKIFYRTYG GPTKV+LI GLA TH+AWGPQ+KGL
Sbjct: 1 MPFC-YVGTQPSSPVADAPLN-NDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLT 58
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
GT NDDD+ ++ + GI VCAFDNRG+GRSSV V K+EY+TKIMAKD IAL
Sbjct: 59 GTTVSNDDDDDDVRVVWSGEEVNGGIHVCAFDNRGVGRSSVAVSKSEYSTKIMAKDAIAL 118
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AHVFGHSMGAMIACK+AAMVP+RVLSLALLNVTGGGFQC PKLD +T+S+A
Sbjct: 119 LDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQKTISVAY 178
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYSQEYLEEYVG+ RRAILYQ+YVKGIS TGMQSNYGFDGQ
Sbjct: 179 RFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQ 238
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
++ACW HKMT+ +I+ I+SAGFLVSVIHGRHD+IAQI YA+RLAE+L+PVARM+DL GGH
Sbjct: 239 LNACWTHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAERLHPVARMVDLHGGH 298
Query: 301 LVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSS 338
LVSHER EEVNQAL DLIKASE +SP DWTNLP+ S
Sbjct: 299 LVSHERPEEVNQALFDLIKASEVNMSPHDWTNLPKKES 336
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 351 | ||||||
| TAIR|locus:2168357 | 396 | AT5G53050 [Arabidopsis thalian | 0.925 | 0.820 | 0.748 | 8.8e-134 | |
| DICTYBASE|DDB_G0281917 | 317 | DDB_G0281917 "alpha/beta hydro | 0.629 | 0.697 | 0.314 | 1.6e-22 | |
| DICTYBASE|DDB_G0277679 | 366 | DDB_G0277679 "alpha/beta hydro | 0.632 | 0.606 | 0.285 | 2.3e-22 | |
| DICTYBASE|DDB_G0290427 | 320 | DDB_G0290427 "alpha/beta hydro | 0.629 | 0.690 | 0.331 | 2.6e-22 | |
| UNIPROTKB|O06420 | 262 | bpoC "Putative non-heme bromop | 0.623 | 0.835 | 0.299 | 1.1e-09 | |
| UNIPROTKB|G4N3M2 | 357 | MGG_05826 "Epoxide hydrolase 2 | 0.225 | 0.221 | 0.379 | 1.2e-09 | |
| UNIPROTKB|Q0BZI5 | 320 | HNE_2413 "Putative epoxide hyd | 0.219 | 0.240 | 0.402 | 6.5e-09 | |
| UNIPROTKB|Q747V8 | 266 | GSU3157 "Hydrolase or acyltran | 0.193 | 0.255 | 0.428 | 9e-09 | |
| TIGR_CMR|GSU_3157 | 266 | GSU_3157 "hydrolase, alpha/bet | 0.193 | 0.255 | 0.428 | 9e-09 | |
| UNIPROTKB|Q3ABD5 | 258 | CHY_1729 "Hydrolase, alpha/bet | 0.182 | 0.248 | 0.469 | 1.8e-08 |
| TAIR|locus:2168357 AT5G53050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
Identities = 250/334 (74%), Positives = 289/334 (86%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+CEVV ++ P+ LN+ IKIFYRTYG GP K +LI GLAGTH++WGPQ+ GL
Sbjct: 1 MPFCEVV---KEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLT 57
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
GTDKPNDDD+ + S D +GIEVCAFDNRGMGRSSVP K+EYTT IMA D I+L
Sbjct: 58 GTDKPNDDDDD--DGGIVSDD--SGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDSISL 113
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AH+ GHSMGAMIACKLAAM PERVLSLALLNVTGGGF+C PKLD ++LSIAI
Sbjct: 114 LDHLGWKKAHIIGHSMGAMIACKLAAMAPERVLSLALLNVTGGGFECFPKLDRKSLSIAI 173
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYS++YLEE VG++TRRAILYQ+YVKGIS TGMQS YGFDGQ
Sbjct: 174 RFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQ 233
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
I+ACW+HK+T+ +I+ IRSAGFLVSVIHGRHDVIAQICYARRLA++LYPVARM+DL GGH
Sbjct: 234 INACWLHKITKVEIELIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLHGGH 293
Query: 301 LVSHERTEEVNQALIDLIKASE-KKISPQDWTNL 333
LVSHERTEEVN+AL++LIKASE KKIS DWTNL
Sbjct: 294 LVSHERTEEVNKALLELIKASEMKKIST-DWTNL 326
|
|
| DICTYBASE|DDB_G0281917 DDB_G0281917 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 73/232 (31%), Positives = 116/232 (50%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
++ FDNRG G S P K ++T MA D+I LMDHLGW AHV G SMG MIA +LA
Sbjct: 73 QIVIFDNRGSGNSGTPNK---FSTFDMALDMIELMDHLGWDSAHVIGASMGGMIALELAT 129
Query: 147 MVP-ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
++P +R+ SL L VT G P + ++ +I F P K++ + +D+ YS+EYL
Sbjct: 130 VIPPQRIRSLTLA-VTHAGHTITPIKGTKAVTKSI-F--TSDPIKKSQITIDSLYSKEYL 185
Query: 206 EEYV---GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ S + + +L +V + + S G + H +++ ++ I + F
Sbjct: 186 SKLSIEDPSRSNKDVLTDIFVDRLKTSKKPSLNAIMGHFKSVLTHYISETKLKYISNQEF 245
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQAL 314
+ +I G +D + + L KL P + GH V+ ER + N +
Sbjct: 246 PIQIITGTNDHLVDPKNSFYLKSKLNPCEFTVFQGCGHAVNTERLNDFNNLI 297
|
|
| DICTYBASE|DDB_G0277679 DDB_G0277679 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 230 (86.0 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 66/231 (28%), Positives = 111/231 (48%)
Query: 87 EVCAFDNRGMGRSSVPVKKT-EYTTKIMAKDVIALM-DHLGWKQAHVFGHSMGAMIACKL 144
E+C FDNRG+G+S++ K + ++TK MA D I L+ D L W + H+ G SMG M + L
Sbjct: 74 EICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHL 133
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
++++PE+V SL + V G F P + + FF +K+A + YS Y
Sbjct: 134 SSIIPEKVQSLVIACVPNGYF--LPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNY 191
Query: 205 LEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
L+E S TR ++++ G G QI ++ ++K ++ I+
Sbjct: 192 LDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYI-TNRFSKKSLEVIKKYSI 250
Query: 263 LVSVIHGRHDVIAQICYARR-LAEKLYPVARMIDLPGGHLVSHERTEEVNQ 312
VI+ + D + I ++ + L P+ + + GGHL E N+
Sbjct: 251 PTIVINSKKDSLVTIDITKKQIVNPLKPLNFHV-IEGGHLSQLENPTFFNK 300
|
|
| DICTYBASE|DDB_G0290427 DDB_G0290427 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 77/232 (33%), Positives = 117/232 (50%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
E FDNRG+GRS P T Y++ MA D++ LMDHL W++AHV G SMG MI+ +LA
Sbjct: 76 EYLIFDNRGVGRSGNPT--TSYSSSSMATDLLELMDHLQWEKAHVVGVSMGGMISLELAH 133
Query: 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL- 205
+ P+R+ SLAL+ VT G P + ++ I F R KR V YS+ YL
Sbjct: 134 LAPQRMKSLALV-VTHAG-SLAPARGVWGITQTI-FIRDH--RKRGRVLAAILYSKPYLI 188
Query: 206 -EEYVG-SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA-GF 262
+ V + T + ++Y K + T + G I HK+++K + I+ G
Sbjct: 189 KQSLVDPTKTNLEMFVEKYCKDMETTKPPAISALYGHIRTVNTHKVSKKRLLEIKEKIGG 248
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQAL 314
+++I G HD + + L L P ++ GH V+ E +E + A+
Sbjct: 249 PITIITGTHDDLVSPSGSHYLNSILSPTEFVVFQGSGHSVNIENYQEFHDAI 300
|
|
| UNIPROTKB|O06420 bpoC "Putative non-heme bromoperoxidase BpoC" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 161 (61.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 73/244 (29%), Positives = 106/244 (43%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG FDNRG+G + +TT+ M D AL++ L A V G SMGA IA +
Sbjct: 39 AGYRCITFDNRGIGATE---NAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQE 95
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF-RAKTPEKRAAVDLDTHYSQ 202
L + PE V S A+L T G +LD A +FF +A+ + V L Y
Sbjct: 96 LMVVAPELVSS-AVLMATRG------RLDR-----ARQFFNKAEAELYDSGVQLPPTYDA 143
Query: 203 E--YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
LE + + + +++ S ++S G Q+ T + + R+
Sbjct: 144 RARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA---PQTNR-LPAYRNI 199
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLIK 319
V VI DV+ R +A+ L P R + +P GHL ER E VN A++
Sbjct: 200 AAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFF- 257
Query: 320 ASEK 323
AS K
Sbjct: 258 ASVK 261
|
|
| UNIPROTKB|G4N3M2 MGG_05826 "Epoxide hydrolase 2" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
GG G A D RG GRSSVP Y + D++AL+ HL +A GH GA +
Sbjct: 53 GGLGFHAVAPDTRGYGRSSVPAGPEAYALEHHVSDMVALLAHLRRDKAVWIGHDWGAGLV 112
Query: 142 CKLAAMVPERVLSLALLNV 160
AAM P++ + + L V
Sbjct: 113 WAFAAMQPDKCVGVCCLTV 131
|
|
| UNIPROTKB|Q0BZI5 HNE_2413 "Putative epoxide hydrolase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V A D RG G+S P + T+Y + KDVI L+ LG+ A V GH GA A
Sbjct: 52 AGYHVVAPDMRGYGKSDKPPEITDYVQTEVIKDVIGLIPALGYDNAVVIGHDWGAPTAWS 111
Query: 144 LAAMVPERVLSLALLNV 160
A P++V ++ L+V
Sbjct: 112 TALFHPDKVRAVGGLSV 128
|
|
| UNIPROTKB|Q747V8 GSU3157 "Hydrolase or acyltransferase, alpha/beta fold family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 127 (49.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
GAG + D RG G S P Y+ +I A D++ALMDHL QA + G SMG +
Sbjct: 43 GAGFRLVTPDLRGFGESDAP--DGPYSMEIFADDIVALMDHLSIGQAVIGGMSMGGYVLM 100
Query: 143 KLAAMVPERV 152
L PERV
Sbjct: 101 NLLERYPERV 110
|
|
| TIGR_CMR|GSU_3157 GSU_3157 "hydrolase, alpha/beta fold family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 127 (49.8 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
GAG + D RG G S P Y+ +I A D++ALMDHL QA + G SMG +
Sbjct: 43 GAGFRLVTPDLRGFGESDAP--DGPYSMEIFADDIVALMDHLSIGQAVIGGMSMGGYVLM 100
Query: 143 KLAAMVPERV 152
L PERV
Sbjct: 101 NLLERYPERV 110
|
|
| UNIPROTKB|Q3ABD5 CHY_1729 "Hydrolase, alpha/beta fold family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 124 (48.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER 151
DNRG GRS P + +T + A D+ L+D L ++AH+FG SMG MIA A PER
Sbjct: 53 DNRGAGRSDCP--EEPWTIETNADDLKELLDVLKIEKAHIFGISMGGMIAQIFAIKYPER 110
Query: 152 VLSLAL 157
V L L
Sbjct: 111 VEKLVL 116
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 351 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 5e-34 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-22 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-19 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 3e-16 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 5e-16 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 6e-15 | |
| PRK10673 | 255 | PRK10673, PRK10673, acyl-CoA esterase; Provisional | 1e-07 | |
| COG2021 | 368 | COG2021, MET2, Homoserine acetyltransferase [Amino | 5e-07 | |
| TIGR02240 | 276 | TIGR02240, PHA_depoly_arom, poly(3-hydroxyalkanoat | 1e-06 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 2e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 3e-06 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 9e-06 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 1e-05 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 2e-05 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 4e-05 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 5e-05 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 1e-04 | |
| pfam03096 | 284 | pfam03096, Ndr, Ndr family | 2e-04 | |
| TIGR01249 | 306 | TIGR01249, pro_imino_pep_1, proline iminopeptidase | 3e-04 | |
| TIGR01392 | 351 | TIGR01392, homoserO_Ac_trn, homoserine O-acetyltra | 6e-04 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 8e-04 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 0.004 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 126 bits (316), Expect = 5e-34
Identities = 70/309 (22%), Positives = 106/309 (34%), Gaps = 30/309 (9%)
Query: 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQD 75
L +G+++ YR G G ++L+ G G+ W P K L
Sbjct: 1 ASLLLAADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLP--------------- 45
Query: 76 SVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHS 135
A V A D RG GRS Y+ A D+ AL+D LG ++ + GHS
Sbjct: 46 -----ALAARYRVIAPDLRGHGRSDPA----GYSLSAYADDLAALLDALGLEKVVLVGHS 96
Query: 136 MGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV- 194
MG +A LA P+RV L L+ L + + AA
Sbjct: 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAF 156
Query: 195 -DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
L + L + +A ++ + + +
Sbjct: 157 AALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAA 216
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
+ I +IHG D + ARRLA L AR++ +PG GH E E
Sbjct: 217 LARITVP---TLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAA 273
Query: 313 ALIDLIKAS 321
AL+ ++
Sbjct: 274 ALLAFLERL 282
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 2e-22
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 19/237 (8%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
+V AFD RG GRSS P +Y +A+D+ AL+D LG + ++ GHSMG +IA AA
Sbjct: 2 DVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALAYAA 61
Query: 147 MVPERVLSLALLN-VTGGGFQ--CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQE 203
P+RV +L L+ V G P+ +L L + F + + A+ +
Sbjct: 62 KYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDN--FFNRLYDSVEALLGRAIKQFQ 119
Query: 204 YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD--GQIHAC-WMHKMTQKDIQTIRSA 260
L S + ++ T G + D+ T+
Sbjct: 120 ALGRPFVSDFLKQFELSSLIRF-GETLALDGLLGYALGYDLVWDRSAALKDIDVPTL--- 175
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+I G D + + +LA P A+++ + GHL E+ +EV + ++
Sbjct: 176 -----IIWGDDDPLVPPDASEKLAALF-PNAQLVVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 6e-19
Identities = 45/164 (27%), Positives = 65/164 (39%), Gaps = 26/164 (15%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+L+ G G+ ++W P + LA AG V A D G G
Sbjct: 1 VVLLHGAGGSAESWRPLAEALA-----------------------AGYRVLAPDLPGHGD 37
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158
S P +T Y+ + A D+ AL+D LG + GHS+G +A AA PERV L L+
Sbjct: 38 SDGP-PRTPYSLEDDAADLAALLDALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLI 96
Query: 159 NVTGGGFQCCPKLDLQTLSIAIR--FFRAKTPEKRAAVDLDTHY 200
+ + D L +R A E A + +
Sbjct: 97 SPPLRDLEELLAADAAALLALLRAALLDADLREALARLTVPVLV 140
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 3e-16
Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 24 GIKIFYRTYGRG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G + Y G G T V+LI G G + W LA
Sbjct: 118 GRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALA---------------------- 155
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V A D G G SS V + +A V+A +D LG ++AH+ GHSMG +A
Sbjct: 156 -AGRPVIALDLPGHGASSKAVGAG--SLDELAAAVLAFLDALGIERAHLVGHSMGGAVAL 212
Query: 143 KLAAMVPERVLSLALL 158
+LAA P+RV SL L+
Sbjct: 213 RLAARAPQRVASLTLI 228
|
Length = 371 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 5e-16
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 26 KIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
++ YR G ++ I L W P L L
Sbjct: 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPAL-----------------------T 37
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
V +D RG G S P + Y+ + +A DV+AL+DHLG ++A G S+G +IA
Sbjct: 38 PDFRVLRYDKRGHGLSDAP--EGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQG 95
Query: 144 LAAMVPERVLSLALLN 159
LAA P+RV +L L N
Sbjct: 96 LAARRPDRVRALVLSN 111
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 6e-15
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 25/133 (18%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
+ P V+L +GL G+ W PQL L Q
Sbjct: 4 LHGPPDADAPV-VVLSSGLGGSGSYWAPQLAVLT-------------QR----------F 39
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
V +D+RG GRS + +Y+ MA DV+ L+D LG ++ H GH++G +I +LA
Sbjct: 40 HVVTYDHRGTGRSPGELP-PDYSIAHMADDVLQLLDALGIERFHFVGHALGGLIGLQLAL 98
Query: 147 MVPERVLSLALLN 159
PER+ SL L+N
Sbjct: 99 DYPERLTSLVLIN 111
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|182637 PRK10673, PRK10673, acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 1e-07
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95
+ ++L+ GL G+ D G + D ND D I+Q D R
Sbjct: 16 NSPIVLVHGLFGSLDNLG-----VLARDLVNDHD--IIQ----------------VDMRN 52
Query: 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155
G S + MA+D++ +D L ++A GHSMG L A+ P+R+ L
Sbjct: 53 HGLSP---RDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKL 109
Query: 156 ALLNV 160
+++
Sbjct: 110 VAIDI 114
|
Length = 255 |
| >gnl|CDD|224932 COG2021, MET2, Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 42/151 (27%), Positives = 55/151 (36%), Gaps = 23/151 (15%)
Query: 27 IFYRTYG---RGPTKVILI-TGLAGTHDAWGPQ-------LKGLAGTDKPNDDDET--IL 73
+ Y TYG +LI L G A G L G KP D + I
Sbjct: 38 VAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVIC 97
Query: 74 QDSVESGDGGAGIEVCAFDNRG--MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AH 130
+ + G G + N G S PV T + M + L+D LG K+ A
Sbjct: 98 TNVLGGCKGSTG---PSSINPGGKPYGSDFPV----ITIRDMVRAQRLLLDALGIKKLAA 150
Query: 131 VFGHSMGAMIACKLAAMVPERVLSLALLNVT 161
V G SMG M A + A P+RV +
Sbjct: 151 VVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181
|
Length = 368 |
| >gnl|CDD|131294 TIGR02240, PHA_depoly_arom, poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 1e-06
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 33/245 (13%)
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
+EV AFD G+G SS P + Y +AK ++D+L + Q + G S G +A + A
Sbjct: 52 LEVIAFDVPGVGGSSTP--RHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFA 109
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PER L L G K + + + R + + A D+
Sbjct: 110 HDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDI--------- 160
Query: 206 EEYVGSSTRRAILYQEYVKGISATGMQSNYG--FDG----QIHACWMHKMTQKDIQTIRS 259
Y G+ R L + + + G Y F G IH W+HK+ Q +
Sbjct: 161 --YGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIH--WLHKIQQPTL----- 211
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319
V+ G D I + R LA ++ P A + + GHL R E V ++ +
Sbjct: 212 ------VLAGDDDPIIPLINMRLLAWRI-PNAELHIIDDGHLFLITRAEAVAPIIMKFLA 264
Query: 320 ASEKK 324
++
Sbjct: 265 EERQR 269
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid [Energy metabolism, Other]. Length = 276 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 40/173 (23%), Positives = 57/173 (32%), Gaps = 46/173 (26%)
Query: 24 GIKIFYRTY-GRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G ++ YRT+ P K V+L+ GL + LA
Sbjct: 19 GTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA------------------- 59
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL--------GWKQAHVF 132
G +V A D RG GRS P + + D + +D +
Sbjct: 60 ---RGFDVYALDLRGHGRS--PRGQRGHVD--SFADYVDDLDAFVETIAEPDPGLPVFLL 112
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185
GHSMG +IA A P R+ L L + P L L + + R
Sbjct: 113 GHSMGGLIALLYLARYPPRIDGLVLSS---------PALGLGGAILRLILARL 156
|
Length = 298 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 3e-06
Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 32/123 (26%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+L+ G G +A+ P + LA G V A D G G
Sbjct: 2 VVLLHGAGGDPEAYAPLARALAS----------------------RGYNVVAVDYPGHGA 39
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158
S A+ V+A L ++ + GHS+G +A LAA P ++ L
Sbjct: 40 S---------LGAPDAEAVLADAP-LDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLA 89
Query: 159 NVT 161
Sbjct: 90 AGD 92
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 9e-06
Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 25/132 (18%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
GP ++L+ G + +W + LA V A D
Sbjct: 28 GPL-LLLLHGTGASTHSWRDLMPPLA-----------------------RSFRVVAPDLP 63
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154
G G + P + +T MA+D+ AL G V GHS GA IA +LA P
Sbjct: 64 GHGFTRAP-FRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRM 122
Query: 155 LALLNVTGGGFQ 166
+ +N F+
Sbjct: 123 VVGINAALMPFE 134
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V D+ G +S V + + A+ V LMD L ++AH+ G+SMG A
Sbjct: 59 AGYRVILKDSPGFNKSDAVVMDEQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALN 117
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189
A P+R+ L L+ G G + ++ + + + + + E
Sbjct: 118 FALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYE 163
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 27/119 (22%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G+++ +G PT V+L+ G H+ W LA
Sbjct: 11 DGVRLAVYEWGDPDRPT-VVLVHGYPDNHEVWDGVAPLLA-------------------- 49
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGA 138
V A+D RG GRSS P + YT +A D A++D + + H+ H G+
Sbjct: 50 ---DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGS 105
|
Length = 582 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 26/144 (18%)
Query: 22 DNGIKIFYRTYGRGP-TKVILI-TGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
D G +F +T G G K++L+ G +H+ ++ +L++
Sbjct: 10 DGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYL--------------ENLRELLKEE--- 52
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHSMG 137
G EV +D G G S P E +T ++ + + LG + ++ GHS G
Sbjct: 53 -----GREVIMYDQLGCGYSDQPDDSDEELWTIDYFVDELEEVREKLGLDKFYLLGHSWG 107
Query: 138 AMIACKLAAMVPERVLSLALLNVT 161
M+A + A + + L + ++
Sbjct: 108 GMLAQEYALKYGQHLKGLIISSML 131
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA-LMDHLGWKQAHVFGHSMGAMIA 141
G A D G G S P Y + +A+ ++A L+D LG + + G+SMG IA
Sbjct: 26 GPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQLLLATLLDQLGIEPFFLVGYSMGGRIA 85
Query: 142 CKLAAMVPERVLSLAL 157
A PERV L L
Sbjct: 86 LYYALQYPERVQGLIL 101
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 54/264 (20%), Positives = 102/264 (38%), Gaps = 53/264 (20%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
+V A D G G S + EY + V + + + A + G+S+G A A
Sbjct: 114 KVYALDLLGFGWSDKAL--IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAV 171
Query: 147 MVPERVLSLALLNVTGGGFQCC----PKLDLQTLSIAIRFF------------------R 184
PE V +ALLN + G F + + ++ RF +
Sbjct: 172 GYPELVAGVALLN-SAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQ 230
Query: 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244
AK P + +V + + +++Y+ V+ I+ N G+++
Sbjct: 231 AKQPSRIESVLKSVYKDKSNVDDYL-------------VESITEPAADPN---AGEVYYR 274
Query: 245 WMHK-MTQKDIQTIRSAGFLVS-------VIHGRHDVIAQICYARRLAEKLYPVARMIDL 296
M + + + T+ S L+S ++ G D A ++ + YP +++L
Sbjct: 275 LMSRFLFNQSRYTLDS---LLSKLSCPLLLLWGDLDPWVGPAKAEKI-KAFYPDTTLVNL 330
Query: 297 PGGHLVSHERTEEVNQALIDLIKA 320
GH E E+VN+AL++ + +
Sbjct: 331 QAGHCPHDEVPEQVNKALLEWLSS 354
|
Length = 354 |
| >gnl|CDD|190521 pfam03096, Ndr, Ndr family | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 19/69 (27%), Positives = 27/69 (39%)
Query: 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155
G +S P + +A + ++DH K G GA I + A PERV L
Sbjct: 68 DGAASFPGGYPYPSLDDLADMIPVVLDHFRLKSVIGMGVGAGAYILARFALKHPERVEGL 127
Query: 156 ALLNVTGGG 164
L+N
Sbjct: 128 VLINPDPNA 136
|
This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284 |
| >gnl|CDD|130316 TIGR01249, pro_imino_pep_1, proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150
FD RG G+S+ E TT + D+ L + LG K VFG S G+ +A A PE
Sbjct: 59 FDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE 118
Query: 151 RVLSLAL 157
V L L
Sbjct: 119 VVTGLVL 125
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. Length = 306 |
| >gnl|CDD|233393 TIGR01392, homoserO_Ac_trn, homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 23 NGIKIFYRTYGR---GPTKVILI----TG---LAGTHDAWGPQL-KGLAGTDKPNDDDE- 70
+ +++ Y TYG + +L+ TG +AG HD P L G + D D
Sbjct: 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRY 73
Query: 71 -TILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ- 128
+ + + G G R G + T + K L+DHLG +Q
Sbjct: 74 FVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI-----TIRDDVKAQKLLLDHLGIEQI 128
Query: 129 AHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161
A V G SMG M A + A PERV ++ +L +
Sbjct: 129 AAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes [Amino acid biosynthesis, Aspartate family]. Length = 351 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V A D G GRS P ++ +YT + + + + L + G +I
Sbjct: 71 AAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGL 130
Query: 143 KLAAMVPERVLSLALLN 159
+LAA P+R L + N
Sbjct: 131 RLAAEHPDRFARLVVAN 147
|
Length = 302 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.004
Identities = 26/51 (50%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
V VIHG D + ARRLAE L P A ++ LPG GHL E EEV +A
Sbjct: 138 VLVIHGEDDPLVPPEAARRLAEAL-PGAELVVLPGAGHLPHLEHPEEVAEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 351 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.98 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.98 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.97 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.97 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.95 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.95 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.95 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.95 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.95 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.95 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.95 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.95 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.94 | |
| PLN02511 | 388 | hydrolase | 99.94 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.94 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.91 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.91 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.9 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.9 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.89 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.89 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.88 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.88 | |
| PRK10566 | 249 | esterase; Provisional | 99.88 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.87 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.86 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.85 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.84 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.83 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.82 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.81 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.8 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.78 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.78 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.76 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.74 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.74 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.73 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.72 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.71 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.7 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.7 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.7 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.7 | |
| PLN00021 | 313 | chlorophyllase | 99.68 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.68 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.68 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.64 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.63 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.63 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.62 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.62 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.6 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.6 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.6 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.59 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.59 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.57 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.56 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.56 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.53 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.51 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.51 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.51 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.5 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.45 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.45 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.44 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.44 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.44 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.4 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.38 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.37 | |
| PRK10115 | 686 | protease 2; Provisional | 99.37 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.36 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.36 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.34 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.34 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.33 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.3 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.28 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.26 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.24 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.2 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.16 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.16 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.15 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.14 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.13 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.11 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.09 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.09 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.07 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.06 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.04 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.03 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.03 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.93 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.91 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.91 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.88 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.87 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.85 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.84 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.84 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.83 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.82 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.82 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.8 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.79 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.79 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.78 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.75 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.65 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.56 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.54 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.52 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.51 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.49 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.45 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.45 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.44 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.42 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.41 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.39 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.38 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.37 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.3 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.26 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.24 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.2 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.18 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.13 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.08 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.07 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.01 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.01 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.98 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.97 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.97 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.95 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.95 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.88 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.81 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.78 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.77 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.77 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.76 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.76 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.73 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.66 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.58 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.4 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.4 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.39 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.34 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.19 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.16 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.16 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.08 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.99 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.89 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.76 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 96.74 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.69 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.69 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.58 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.33 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.21 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.12 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.08 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 96.05 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.03 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 95.92 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 95.55 | |
| PLN02162 | 475 | triacylglycerol lipase | 95.49 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 95.49 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.48 | |
| PLN02454 | 414 | triacylglycerol lipase | 95.36 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.35 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.3 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 95.29 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.27 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 95.04 | |
| PLN02408 | 365 | phospholipase A1 | 94.85 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 94.56 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.21 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.11 | |
| PLN02934 | 515 | triacylglycerol lipase | 94.06 | |
| PLN02324 | 415 | triacylglycerol lipase | 93.97 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 93.64 | |
| PLN02802 | 509 | triacylglycerol lipase | 93.61 | |
| PLN02753 | 531 | triacylglycerol lipase | 93.41 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.2 | |
| PLN02719 | 518 | triacylglycerol lipase | 93.01 | |
| PLN02761 | 527 | lipase class 3 family protein | 92.82 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 92.58 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 92.0 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 91.69 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 91.45 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 91.31 | |
| PLN02847 | 633 | triacylglycerol lipase | 91.09 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 88.0 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 87.47 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 85.19 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 84.82 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 84.82 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=258.65 Aligned_cols=276 Identities=21% Similarity=0.246 Sum_probs=181.8
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
...+++.+|.+++|...|++.|+|||+||+++++..|..+++.|.+ .|+|+++|+||
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~DlpG 65 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAK-----------------------SHRVYAIDLLG 65 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHh-----------------------CCeEEEEcCCC
Confidence 4678888999999999996446899999999999999999999987 68999999999
Q ss_pred CCCCCCCCC-----CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC--
Q 018750 96 MGRSSVPVK-----KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC-- 168 (351)
Q Consensus 96 ~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-- 168 (351)
||.|+.+.. ...++++++++++.++++.++.++++++||||||++++.+|.++|++|+++|++++...+....
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~ 145 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQ 145 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccccccc
Confidence 999986542 1358999999999999999999999999999999999999999999999999999864322111
Q ss_pred CccchhhhHHHHhhcccCCHHHH-hhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKR-AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
+.............+........ .............+...+..... ......+.+....... ............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 220 (294)
T PLN02824 146 PWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSA---VTDELVEAILRPGLEP--GAVDVFLDFISY 220 (294)
T ss_pred chhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhh---ccHHHHHHHHhccCCc--hHHHHHHHHhcc
Confidence 11111111111111111000000 00000000001111111111100 0011111111100000 000011111110
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.........+.++++|+|+|+|++|.+++.+.++.+.+. .++++++++++ ||++++|+|++|++.|.+|+++
T Consensus 221 ~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 221 SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANF-DAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhc-CCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 111122356788999999999999999999999987775 47789999997 9999999999999999999975
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=241.81 Aligned_cols=272 Identities=29% Similarity=0.408 Sum_probs=189.1
Q ss_pred CccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
...+++.+|++++|.+.|+ +.|.|+++||++.+...|+.++..|+. +||+|+|+|+|
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~----------------------~~~rviA~Dlr 80 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLAS----------------------RGYRVIAPDLR 80 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhh----------------------cceEEEecCCC
Confidence 4677888999999999996 557899999999999999999999998 68999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|+|.|+.+.....|++..++.|+..+++++|.++++++||+||+++|+.+|..+|++|+++|.++.... .|.....
T Consensus 81 GyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~----~p~~~~~ 156 (322)
T KOG4178|consen 81 GYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP----NPKLKPL 156 (322)
T ss_pred CCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC----Ccccchh
Confidence 999999998878999999999999999999999999999999999999999999999999999998754 1111111
Q ss_pred hhHHHH------h--hcccCCHHHHhhcCccccccHHHHHHhhcC----------------CchhhhhHHHHHhhhhhcc
Q 018750 175 TLSIAI------R--FFRAKTPEKRAAVDLDTHYSQEYLEEYVGS----------------STRRAILYQEYVKGISATG 230 (351)
Q Consensus 175 ~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 230 (351)
...... . +......+... .....+.....+... .....+..+.+...+...+
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~----s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g 232 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETEL----SKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDG 232 (322)
T ss_pred hhhccccCccceeEeccccCcchhhh----ccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccc
Confidence 100000 0 00000000000 000000000000000 0011222333333343333
Q ss_pred CCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCc-eEEEcCC-CccccccChH
Q 018750 231 MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPG-GHLVSHERTE 308 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~g-gH~~~~~~p~ 308 (351)
.....++.+.+...|. .....+.++++|+++|+|+.|.+.+.....+..+...++. +.+++++ ||+++.|+|+
T Consensus 233 ~~gplNyyrn~~r~w~-----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~ 307 (322)
T KOG4178|consen 233 FTGPLNYYRNFRRNWE-----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQ 307 (322)
T ss_pred ccccchhhHHHhhCch-----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHH
Confidence 3344444444433321 1124567889999999999999998764444444333654 6777788 9999999999
Q ss_pred HHHHHHHHHHHhcC
Q 018750 309 EVNQALIDLIKASE 322 (351)
Q Consensus 309 ~~~~~i~~fl~~~~ 322 (351)
+|++.|.+|+++..
T Consensus 308 ~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 308 EVNQAILGFINSFS 321 (322)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998753
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=250.61 Aligned_cols=273 Identities=17% Similarity=0.178 Sum_probs=177.8
Q ss_pred cCCCCccccccCC-----eEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCC
Q 018750 12 QSAAPDAALNDNG-----IKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85 (351)
Q Consensus 12 ~~~~~~~~~~~~g-----~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 85 (351)
+.....+++++++ .+++|.+.|+ ..|+|||+||++++...|..+++.|.+ +|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~----------------------~g 73 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAA----------------------AG 73 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHh----------------------CC
Confidence 3344567788888 8999999986 346899999999999999999999986 58
Q ss_pred eEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 86 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
|+|+++|+||||.|+.+.....++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.....
T Consensus 74 y~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 153 (302)
T PRK00870 74 HRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTG 153 (302)
T ss_pred CEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCc
Confidence 99999999999999876543468999999999999999999999999999999999999999999999999998642211
Q ss_pred CCCCccchhhhHHHHhhcccCCH---HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTP---EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
.... .........+...... ..............+....+... ..... .......+.... ........
T Consensus 154 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~---~~~~~~~~- 224 (302)
T PRK00870 154 DGPM---PDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAP-FPDES-YKAGARAFPLLV---PTSPDDPA- 224 (302)
T ss_pred cccc---hHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcc-cCChh-hhcchhhhhhcC---CCCCCCcc-
Confidence 1000 0001101111000000 00000000001111111111100 00000 000000000000 00000000
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCce---EEEcCC-CccccccChHHHHHHHHHHH
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR---MIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~---~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
..........+.++++|+++|+|++|.++|... +++.+.+ ++++ +.++++ ||++++|+|+++++.|.+||
T Consensus 225 ----~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 298 (302)
T PRK00870 225 ----VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFI 298 (302)
T ss_pred ----hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHH
Confidence 000112235678899999999999999999766 7777765 6665 788998 99999999999999999999
Q ss_pred Hhc
Q 018750 319 KAS 321 (351)
Q Consensus 319 ~~~ 321 (351)
+++
T Consensus 299 ~~~ 301 (302)
T PRK00870 299 RAT 301 (302)
T ss_pred hcC
Confidence 764
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=248.08 Aligned_cols=261 Identities=22% Similarity=0.308 Sum_probs=178.0
Q ss_pred ccccCCeEEEEEEc--CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 19 ALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 19 ~~~~~g~~l~y~~~--g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
+++++|.+++|... ++++++|||+||++++...|.++++.|.+ +|+|+++|+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~ 62 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-----------------------DLEVIAFDVPGV 62 (276)
T ss_pred EeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-----------------------CceEEEECCCCC
Confidence 46778999999775 34556799999999999999999999987 899999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhh
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (351)
|.|+.+. ..++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++...... .+... ...
T Consensus 63 G~S~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~-~~~ 138 (276)
T TIGR02240 63 GGSSTPR--HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVM-VPGKP-KVL 138 (276)
T ss_pred CCCCCCC--CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcccc-CCCch-hHH
Confidence 9998654 4678999999999999999999999999999999999999999999999999998743110 00000 000
Q ss_pred HHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
... ... ....... .............. ........+....... ....+.... . .........
T Consensus 139 ---~~~-~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~-~~~~~~~~~ 201 (276)
T TIGR02240 139 ---MMM-ASP--RRYIQPS----HGIHIAPDIYGGAFRRDPELAMAHASKVRSG---GKLGYYWQL---F-AGLGWTSIH 201 (276)
T ss_pred ---HHh-cCc--hhhhccc----cccchhhhhccceeeccchhhhhhhhhcccC---CCchHHHHH---H-HHcCCchhh
Confidence 000 000 0000000 00000000000000 0000011111100000 000000000 0 001112235
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhcCCC
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
.+.++++|+|+|+|++|+++|++.++++.+.+ ++++++++++||+++.|+|+++++.|.+|+++.++.
T Consensus 202 ~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 202 WLHKIQQPTLVLAGDDDPIIPLINMRLLAWRI-PNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred HhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC-CCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhhh
Confidence 57889999999999999999999999999876 889999998899999999999999999999987654
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=249.50 Aligned_cols=273 Identities=17% Similarity=0.177 Sum_probs=177.3
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+..+++.+|.+++|.+.|+++ +|||+||++++...|..+++.|.+ .++|+++|+||
T Consensus 8 ~~~~~~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~D~~G 63 (295)
T PRK03592 8 EMRRVEVLGSRMAYIETGEGD-PIVFLHGNPTSSYLWRNIIPHLAG-----------------------LGRCLAPDLIG 63 (295)
T ss_pred cceEEEECCEEEEEEEeCCCC-EEEEECCCCCCHHHHHHHHHHHhh-----------------------CCEEEEEcCCC
Confidence 455678899999999999765 699999999999999999999987 56999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
||.|+.+. ..++++++++|+.+++++++.++++++||||||.+|+.++.++|++|+++|++++..... ....... .
T Consensus 64 ~G~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~-~ 139 (295)
T PRK03592 64 MGASDKPD--IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPM-TWDDFPP-A 139 (295)
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCc-chhhcch-h
Confidence 99998765 357999999999999999999999999999999999999999999999999999743211 0010110 1
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC---chhhhhHHHHHhhhhhccCCCCCCcchhhhhhh-------
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS---TRRAILYQEYVKGISATGMQSNYGFDGQIHACW------- 245 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 245 (351)
.......+....... .... ....+....+... .........+...+.... .............
T Consensus 140 ~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 212 (295)
T PRK03592 140 VRELFQALRSPGEGE-EMVL----EENVFIERVLPGSILRPLSDEEMAVYRRPFPTPE--SRRPTLSWPRELPIDGEPAD 212 (295)
T ss_pred HHHHHHHHhCccccc-cccc----chhhHHhhcccCcccccCCHHHHHHHHhhcCCch--hhhhhhhhhhhcCCCCcchh
Confidence 111111111100000 0000 0001111111110 000011111111110000 0000000000000
Q ss_pred cccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
......+....+.++++|+|+|+|++|.++++....++...+.++.+++++++ ||+++.|+|+++++.|.+|+++...
T Consensus 213 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 213 VVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 00011122355778999999999999999955555555544448899999987 9999999999999999999987654
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=247.56 Aligned_cols=273 Identities=20% Similarity=0.220 Sum_probs=173.7
Q ss_pred ccccccCCe-EEEEEEcCCC-----CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 17 DAALNDNGI-KIFYRTYGRG-----PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 17 ~~~~~~~g~-~l~y~~~g~~-----~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
.+.+..+|. +++|.+.|++ .|+|||+||++++...|.++++.|.+ +|+|++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via 119 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-----------------------NYTVYA 119 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEE
Confidence 345566677 9999999975 36799999999999999999999987 899999
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh-CCcccceEEEeccCCCCCCCCC
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
+|+||||.|+.+.. ..++++++++++.++++.++.++++|+||||||.+++.++.. +|++|+++|++++....... .
T Consensus 120 ~Dl~G~G~S~~~~~-~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~-~ 197 (360)
T PLN02679 120 IDLLGFGASDKPPG-FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNK-A 197 (360)
T ss_pred ECCCCCCCCCCCCC-ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccc-c
Confidence 99999999987643 468999999999999999999999999999999999998874 79999999999986421100 0
Q ss_pred ccchhhhH------HHHhhcccCCHH--HHhhcCccccccHHHHHHhhcCC-chhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 170 KLDLQTLS------IAIRFFRAKTPE--KRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 170 ~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
........ ....++...... ...............+....... .......+.+.... ........
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 271 (360)
T PLN02679 198 VVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA------DDEGALDA 271 (360)
T ss_pred ccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc------cCCChHHH
Confidence 00000000 000000000000 00000000000001111111110 00111111111000 00000011
Q ss_pred hhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHH-----HHHHHHHhCCCceEEEcCC-CccccccChHHHHHHH
Q 018750 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-----ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i 314 (351)
+..........+....+.++++|+|+|+|++|.++|++. .+.+.+.+ ++++++++++ ||++++|+|+++++.|
T Consensus 272 ~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 272 FVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred HHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHH
Confidence 111111011122345678899999999999999998763 23455544 8899999998 9999999999999999
Q ss_pred HHHHHhc
Q 018750 315 IDLIKAS 321 (351)
Q Consensus 315 ~~fl~~~ 321 (351)
.+||++.
T Consensus 351 ~~FL~~~ 357 (360)
T PLN02679 351 LPWLAQL 357 (360)
T ss_pred HHHHHhc
Confidence 9999864
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=247.35 Aligned_cols=274 Identities=19% Similarity=0.211 Sum_probs=176.8
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
..+++.+|.+++|...|+++ +|||+||++++...|..+++.|.+ +|+|+++|+|||
T Consensus 68 ~~~~~~~~~~i~Y~~~g~g~-~vvliHG~~~~~~~w~~~~~~l~~-----------------------~~~v~~~D~~G~ 123 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQGEGL-PIVLIHGFGASAFHWRYNIPELAK-----------------------KYKVYALDLLGF 123 (354)
T ss_pred ceEEEECCEEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCC
Confidence 35567789999999999775 599999999999999999999987 899999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch---
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL--- 173 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--- 173 (351)
|.|+.+. ..++.+.+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+...........
T Consensus 124 G~S~~~~--~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~ 201 (354)
T PLN02578 124 GWSDKAL--IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIV 201 (354)
T ss_pred CCCCCcc--cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccc
Confidence 9998765 46889999999999999998899999999999999999999999999999999876421110000000
Q ss_pred ---hhhHH-----HHhhcccCCHHHHhhcCccccccHHHHHHhhcCC-chhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 174 ---QTLSI-----AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 174 ---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
..... ..............................+... .......+...... ........+...+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 279 (354)
T PLN02578 202 VEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPA--ADPNAGEVYYRLMSRF 279 (354)
T ss_pred cccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcc--cCCchHHHHHHHHHHH
Confidence 00000 0000000000000000000000000000011000 00011111110000 0000000001111111
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHH
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~ 319 (351)
..........+.++++++|+++|+|++|.+++.+.++++.+.+ ++++++++++||+++.|+|+++++.|.+|++
T Consensus 280 ~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 280 LFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred hcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 1111122334667889999999999999999999999998875 8899999977999999999999999999996
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=235.44 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=163.1
Q ss_pred CeEEEEEEcCCCCCeEEEEecCCCCccchHHH---HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 24 g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
+.+++|...|+++ +|||+||++.+...|..+ +..+.+ .||+|+++|+||||.|+
T Consensus 19 ~~~~~y~~~g~~~-~ivllHG~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G~S~ 75 (282)
T TIGR03343 19 NFRIHYNEAGNGE-AVIMLHGGGPGAGGWSNYYRNIGPFVD----------------------AGYRVILKDSPGFNKSD 75 (282)
T ss_pred ceeEEEEecCCCC-eEEEECCCCCchhhHHHHHHHHHHHHh----------------------CCCEEEEECCCCCCCCC
Confidence 5779999998764 699999999888777654 344544 48999999999999998
Q ss_pred CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHH
Q 018750 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
........+ ..+++++.++++.++.++++++||||||++++.+|.++|++|+++|++++....................
T Consensus 76 ~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T TIGR03343 76 AVVMDEQRG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLF 154 (282)
T ss_pred CCcCccccc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHH
Confidence 653211222 2568999999999999999999999999999999999999999999999753211100000001111111
Q ss_pred hhcccCCHHHHhhcCccccccHHHHHHhh-cCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhh-hcccCCHHHHHHhh
Q 018750 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC-WMHKMTQKDIQTIR 258 (351)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 258 (351)
............ ..+.... ..........+......... ........... .......+....++
T Consensus 155 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (282)
T TIGR03343 155 KLYAEPSYETLK----------QMLNVFLFDQSLITEELLQGRWENIQRQ----PEHLKNFLISSQKAPLSTWDVTARLG 220 (282)
T ss_pred HHhcCCCHHHHH----------HHHhhCccCcccCcHHHHHhHHHHhhcC----HHHHHHHHHhccccccccchHHHHHh
Confidence 111111000000 0000000 00000000000000000000 00000000000 00001122345678
Q ss_pred ccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 259 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
++++|+|+|+|++|.+++++.++++.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~-~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM-PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC-CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 89999999999999999999999999976 8999999998 9999999999999999999963
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=235.08 Aligned_cols=248 Identities=19% Similarity=0.182 Sum_probs=161.4
Q ss_pred EEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 018750 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (351)
Q Consensus 26 ~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 105 (351)
.++|...|+|+|+|||+||+++++..|..+.+.|.+ +|+|+++|+||||.|+...
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~-- 57 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGFG-- 57 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-----------------------CCEEEEecCCCCCCCCCCC--
Confidence 378889998877799999999999999999999987 8999999999999997543
Q ss_pred CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC--CCCccchhhhHHHHhhc
Q 018750 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCPKLDLQTLSIAIRFF 183 (351)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~ 183 (351)
.++++++++++.+ ++.++++++||||||.+|+.+|.++|++|+++|++++.+.... ..+.............+
T Consensus 58 -~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (256)
T PRK10349 58 -ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 132 (256)
T ss_pred -CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHH
Confidence 4677777777654 4568999999999999999999999999999999987532110 00100000000000000
Q ss_pred ccCCHHHHhhcCccccccHHHHHH-hhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCc
Q 018750 184 RAKTPEKRAAVDLDTHYSQEYLEE-YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (351)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (351)
.... ......++.. ........ .....+...+....... ...+..........+..+.+.++++
T Consensus 133 ~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~ 197 (256)
T PRK10349 133 SDDF----------QRTVERFLALQTMGTETAR-QDARALKKTVLALPMPE----VDVLNGGLEILKTVDLRQPLQNVSM 197 (256)
T ss_pred Hhch----------HHHHHHHHHHHHccCchHH-HHHHHHHHHhhccCCCc----HHHHHHHHHHHHhCccHHHHhhcCC
Confidence 0000 0000111110 00111000 00111111111100000 0000000000011233467788999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
|+|+|+|++|.++|.+.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+|-.
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999988888875 9999999998 999999999999999999864
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=233.15 Aligned_cols=243 Identities=13% Similarity=0.097 Sum_probs=159.3
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (351)
+|||+||++.+...|..+++.|.+ ++|+|+++|+||||.|+.+.. ..++++++++|+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~----------------------~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl 61 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDA----------------------AGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPL 61 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhh----------------------CCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHH
Confidence 599999999999999999999965 499999999999999976543 367899999999
Q ss_pred HHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH---HHhh
Q 018750 118 IALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE---KRAA 193 (351)
Q Consensus 118 ~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 193 (351)
.++++.++. ++++++||||||.+++.++.++|++|+++|++++....... ................... ....
T Consensus 62 ~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
T PLN02965 62 FALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGS---IISPRLKNVMEGTEKIWDYTFGEGPD 138 (255)
T ss_pred HHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCC---CccHHHHhhhhccccceeeeeccCCC
Confidence 999999987 59999999999999999999999999999999986321000 0000000000000000000 0000
Q ss_pred cCccc-cccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCC
Q 018750 194 VDLDT-HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (351)
Q Consensus 194 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 272 (351)
..... .....+............ ........+...... . +.. . .+....+..+++|+++|+|++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~----~~~-----~-~~~~~~~~~i~vP~lvi~g~~D 204 (255)
T PLN02965 139 KPPTGIMMKPEFVRHYYYNQSPLE-DYTLSSKLLRPAPVR---A----FQD-----L-DKLPPNPEAEKVPRVYIKTAKD 204 (255)
T ss_pred CCcchhhcCHHHHHHHHhcCCCHH-HHHHHHHhcCCCCCc---c----hhh-----h-hhccchhhcCCCCEEEEEcCCC
Confidence 00000 001111111111111000 000111111000000 0 000 0 0111244568999999999999
Q ss_pred ccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 273 VIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.++|++.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+|++..
T Consensus 205 ~~~~~~~~~~~~~~~-~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 205 NLFDPVRQDVMVENW-PPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCCCHHHHHHHHHhC-CcceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 999999999999986 8999999987 99999999999999999999864
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=241.86 Aligned_cols=279 Identities=15% Similarity=0.164 Sum_probs=169.1
Q ss_pred ccCCeEEEEEEcCCC--------CCeEEEEecCCCCccchH--HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 21 NDNGIKIFYRTYGRG--------PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 21 ~~~g~~l~y~~~g~~--------~p~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
+.+|.+++|.+.|++ .|+|||+||++++...|. .+.+.|..... .+.+++|+||+
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~---------------~l~~~~~~Via 110 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQ---------------PLDASKYFIIL 110 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCC---------------cccccCCEEEE
Confidence 467999999999974 467999999999988775 55555522110 11125899999
Q ss_pred ecCCCCCCCCCCCCC-----CccchHhHHHHHHHHH-HHhCCcceE-EEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 91 FDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALM-DHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l-~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
+|+||||.|+.+... ..++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.+.
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~ 190 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPT 190 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcc
Confidence 999999999865431 1478999999988854 889988885 899999999999999999999999999987532
Q ss_pred CCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHH-----------HhhcCCchhhhhHHHHHhhhhhccCC
Q 018750 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-----------EYVGSSTRRAILYQEYVKGISATGMQ 232 (351)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (351)
.... .................................... .+..... .......+..........
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 266 (360)
T PRK06489 191 EMSG---RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAP-TRAAADKLVDERLAAPVT 266 (360)
T ss_pred cccH---HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcC-ChHHHHHHHHHHHHhhhh
Confidence 1100 000000000000000000000000000000000000 0000000 000001111110000000
Q ss_pred CCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHH--HHHHHHhCCCceEEEcCC-----Ccccccc
Q 018750 233 SNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA--RRLAEKLYPVARMIDLPG-----GHLVSHE 305 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~g-----gH~~~~~ 305 (351)
....... ..+......+..+.+.+|++|+|+|+|++|.++|++.+ +++.+.+ ++++++++++ ||.++ +
T Consensus 267 --~~~~~~~-~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 267 --ADANDFL-YQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred --cCHHHHH-HHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCcccc-c
Confidence 0000000 00111112234567889999999999999999998875 7788875 9999999986 99987 8
Q ss_pred ChHHHHHHHHHHHHhcCC
Q 018750 306 RTEEVNQALIDLIKASEK 323 (351)
Q Consensus 306 ~p~~~~~~i~~fl~~~~~ 323 (351)
+|+++++.|.+||++..+
T Consensus 342 ~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 342 SAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999987754
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=230.30 Aligned_cols=267 Identities=21% Similarity=0.248 Sum_probs=175.8
Q ss_pred ccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..+++.+|.+++|.+.|+ ..|+|||+||++++...|..+.+.|++ +|+|+++|+||
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G 64 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-----------------------SFRVVAPDLPG 64 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-----------------------CcEEEeecCCC
Confidence 456788999999999986 347899999999999999999999987 89999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
||.|+.+.. ..++++++++|+.++++.++.++++|+||||||.+++.+|.++|++++++|++++...............
T Consensus 65 ~G~S~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~ 143 (278)
T TIGR03056 65 HGFTRAPFR-FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPY 143 (278)
T ss_pred CCCCCCccc-cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccch
Confidence 999986653 3679999999999999999989999999999999999999999999999999987532111100000000
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC--chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
...... ............... ........... .........+..... ........... .........
T Consensus 144 ~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~ 212 (278)
T TIGR03056 144 MARVLA-CNPFTPPMMSRGAAD----QQRVERLIRDTGSLLDKAGMTYYGRLIR-----SPAHVDGALSM-MAQWDLAPL 212 (278)
T ss_pred hhHhhh-hcccchHHHHhhccc----CcchhHHhhccccccccchhhHHHHhhc-----CchhhhHHHHH-hhcccccch
Confidence 000000 000000000000000 00000000000 000000000000000 00000000000 000001112
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
...++++++|+++|+|++|.++|++..+.+.+.+ ++++++.+++ ||+++.+.|+++++.|.+|++
T Consensus 213 ~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 213 NRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 3457788999999999999999999999998875 8899999998 999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=230.61 Aligned_cols=263 Identities=16% Similarity=0.202 Sum_probs=168.8
Q ss_pred CCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
..+.+++++|.+++|...|++ |+|||+||++.+...|..+++.|.+ +|+|+++|+|
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~ 69 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRD-----------------------RFRCVAPDYL 69 (286)
T ss_pred ccceEEEcCCcEEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhC-----------------------CcEEEEECCC
Confidence 456788899999999999976 5799999999988899999999987 8999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|||.|+.+.. ..++.+++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++..... .....
T Consensus 70 G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~---~~~~~- 144 (286)
T PRK03204 70 GFGLSERPSG-FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPA---DTLAM- 144 (286)
T ss_pred CCCCCCCCCc-cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCC---CchhH-
Confidence 9999987653 357899999999999999999999999999999999999999999999999987642110 00000
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhh---hc--ccC
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC---WM--HKM 249 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~ 249 (351)
........... ....... ...+....+...... .........+....... .....+... .. ...
T Consensus 145 --~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 213 (286)
T PRK03204 145 --KAFSRVMSSPP-VQYAILR-RNFFVERLIPAGTEH-RPSSAVMAHYRAVQPNA------AARRGVAEMPKQILAARPL 213 (286)
T ss_pred --HHHHHHhcccc-chhhhhh-hhHHHHHhccccccC-CCCHHHHHHhcCCCCCH------HHHHHHHHHHHhcchhhHH
Confidence 00000000000 0000000 000000000000000 00000111110000000 000000000 00 000
Q ss_pred CHHHHHHhhc--cCccEEEEeecCCccCCHH-HHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 250 TQKDIQTIRS--AGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 250 ~~~~~~~l~~--i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
.......+.. +++|+++|+|++|.++++. ..+.+.+.+ ++.+++++++ ||++++|+|+++++.|.+||
T Consensus 214 ~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 214 LARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 0000011111 2799999999999988654 567777765 8999999998 99999999999999999997
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=242.85 Aligned_cols=271 Identities=20% Similarity=0.259 Sum_probs=169.3
Q ss_pred ccccCCeEEEEEEcCCC----CCeEEEEecCCCCccchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 19 ALNDNGIKIFYRTYGRG----PTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~----~p~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
+.+.++.+++|...|+. +|+|||+||++++...|.. +++.|.+. ..++|+|+++|+
T Consensus 180 ~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~-------------------~~~~yrVia~Dl 240 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDA-------------------AKSTYRLFAVDL 240 (481)
T ss_pred eEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHH-------------------hhCCCEEEEECC
Confidence 45567889999998853 3689999999999999985 44655520 014899999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHH-HHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||||.|+.+.. ..++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.... +...
T Consensus 241 ~G~G~S~~p~~-~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~---~~~~ 316 (481)
T PLN03087 241 LGFGRSPKPAD-SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPV---PKGV 316 (481)
T ss_pred CCCCCCcCCCC-CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcccc---ccch
Confidence 99999987643 4689999999994 89999999999999999999999999999999999999999753221 1100
Q ss_pred hhhhHHHHhhcc--cCCHHHHhhcCccccc----------------cHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC
Q 018750 173 LQTLSIAIRFFR--AKTPEKRAAVDLDTHY----------------SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (351)
Q Consensus 173 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (351)
........... ..............++ ..+.+........... ...+.+.... .
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~l~~~~~~~~---~ 388 (481)
T PLN03087 317 -QATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRT----FLIEGFFCHT---H 388 (481)
T ss_pred -hHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhH----HHHHHHHhcc---c
Confidence 00000000000 0000000000000000 0000000000000000 0000000000 0
Q ss_pred CCcchhhhhhhcc--cCCHHHH-HHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccccc-cChHH
Q 018750 235 YGFDGQIHACWMH--KMTQKDI-QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-ERTEE 309 (351)
Q Consensus 235 ~~~~~~~~~~~~~--~~~~~~~-~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~-~~p~~ 309 (351)
......+...... ....+.. ..+.++++|+|+|+|++|.++|++..+.+.+.+ |+++++++++ ||++++ ++|++
T Consensus 389 ~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~ 467 (481)
T PLN03087 389 NAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKE 467 (481)
T ss_pred hhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHH
Confidence 0000000000000 0001112 233468999999999999999999999999986 9999999998 999885 99999
Q ss_pred HHHHHHHHHHhc
Q 018750 310 VNQALIDLIKAS 321 (351)
Q Consensus 310 ~~~~i~~fl~~~ 321 (351)
+++.|.+|.+..
T Consensus 468 fa~~L~~F~~~~ 479 (481)
T PLN03087 468 FARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHhhcc
Confidence 999999999654
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=232.27 Aligned_cols=267 Identities=16% Similarity=0.172 Sum_probs=171.8
Q ss_pred CccccccCCeEEEEEEcCC----CCCeEEEEecCCCCccc-hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 16 PDAALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
.....+.+|.+++|..+++ .+++|||+||++++... |..++..|.+ +||+|++
T Consensus 63 ~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~v~~ 120 (349)
T PLN02385 63 ESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIAS----------------------SGYGVFA 120 (349)
T ss_pred eeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHh----------------------CCCEEEE
Confidence 3456677899999998874 34679999999988764 6888889987 6999999
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCc------ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK------QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~------~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
+|+||||.|+.+.. ...+++++++|+.++++.++.+ +++|+||||||++++.++.++|++++++|++++....
T Consensus 121 ~D~~G~G~S~~~~~-~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~ 199 (349)
T PLN02385 121 MDYPGFGLSEGLHG-YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKI 199 (349)
T ss_pred ecCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccc
Confidence 99999999986542 2358899999999999887532 7999999999999999999999999999999986421
Q ss_pred CCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 165 FQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
.... ............+....+... ... .. ......+... ....... ...........+..... .
T Consensus 200 ~~~~--~~~~~~~~~~~~~~~~~p~~~-~~~-~~----~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~-~ 264 (349)
T PLN02385 200 ADDV--VPPPLVLQILILLANLLPKAK-LVP-QK----DLAELAFRDL-----KKRKMAE-YNVIAYKDKPRLRTAVE-L 264 (349)
T ss_pred cccc--cCchHHHHHHHHHHHHCCCce-ecC-CC----ccccccccCH-----HHHHHhh-cCcceeCCCcchHHHHH-H
Confidence 1100 000011111100000000000 000 00 0000000000 0000000 00000000000000000 0
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccChHH----HHHHHHHHH
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEE----VNQALIDLI 318 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p~~----~~~~i~~fl 318 (351)
+. ...+....+.++++|+|+|+|++|.++|++.++.+.+.+. ++++++++++ ||+++.++|++ +.+.|.+||
T Consensus 265 l~--~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL 342 (349)
T PLN02385 265 LR--TTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWL 342 (349)
T ss_pred HH--HHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHH
Confidence 00 0123345678899999999999999999999999998763 5689999998 99999999876 888999999
Q ss_pred HhcC
Q 018750 319 KASE 322 (351)
Q Consensus 319 ~~~~ 322 (351)
++..
T Consensus 343 ~~~~ 346 (349)
T PLN02385 343 DSHS 346 (349)
T ss_pred HHhc
Confidence 8764
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=223.08 Aligned_cols=252 Identities=28% Similarity=0.421 Sum_probs=164.9
Q ss_pred EEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 27 l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
++|...|+ +.|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|....
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~S~~~~ 57 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-----------------------RFHVVTYDHRGTGRSPGEL 57 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-----------------------ccEEEEEcCCCCCCCCCCC
Confidence 46777773 567899999999999999999998886 8999999999999998654
Q ss_pred CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhc
Q 018750 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (351)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (351)
. ..++++++++++.++++.++.++++++||||||++++.++.++|++|+++|++++..... + ............+
T Consensus 58 ~-~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~---~-~~~~~~~~~~~~~ 132 (257)
T TIGR03611 58 P-PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD---P-HTRRCFDVRIALL 132 (257)
T ss_pred c-ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC---h-hHHHHHHHHHHHH
Confidence 3 567999999999999999999999999999999999999999999999999998753210 0 0000000000111
Q ss_pred ccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCcc
Q 018750 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (351)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (351)
................+...++.... ....+...... ............ +......+....+.++++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~P 200 (257)
T TIGR03611 133 QHAGPEAYVHAQALFLYPADWISENA------ARLAADEAHAL-----AHFPGKANVLRR-INALEAFDVSARLDRIQHP 200 (257)
T ss_pred hccCcchhhhhhhhhhccccHhhccc------hhhhhhhhhcc-----cccCccHHHHHH-HHHHHcCCcHHHhcccCcc
Confidence 00000000000000000000000000 00000000000 000000000000 0000111223567788999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 264 vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
+++++|++|.++|++.++++.+.+ ++.+++.+++ ||++++++|+++++.|.+||+
T Consensus 201 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 201 VLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred EEEEecCcCcccCHHHHHHHHHhc-CCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999876 8889999997 999999999999999999996
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=229.83 Aligned_cols=265 Identities=19% Similarity=0.218 Sum_probs=171.8
Q ss_pred ccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
.++.+|.+++|.+.|+ +.|+|||+||++++...|..+++.|.+ +|+|+++|+||||
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Via~DlpG~G 165 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-----------------------NYHAIAFDWLGFG 165 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 5678999999999996 357899999999999999999999987 8999999999999
Q ss_pred CCCCCCCC--CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 98 RSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 98 ~S~~~~~~--~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
.|+.+... ..++++++++++.++++.++.++++|+|||+||++++.+|.++|++|+++|+++++..... .... ..
T Consensus 166 ~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~--~~~p-~~ 242 (383)
T PLN03084 166 FSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEH--AKLP-ST 242 (383)
T ss_pred CCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccc--ccch-HH
Confidence 99876531 3689999999999999999999999999999999999999999999999999998632110 0000 00
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC---CHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM---TQK 252 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 252 (351)
.......... ...... ........+.. .............+...+..... ........... ..... ...
T Consensus 243 l~~~~~~l~~---~~~~~~--~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~-~~~~l~~~~r~-~~~~l~~~~~~ 314 (383)
T PLN03084 243 LSEFSNFLLG---EIFSQD--PLRASDKALTS-CGPYAMKEDDAMVYRRPYLTSGS-SGFALNAISRS-MKKELKKYIEE 314 (383)
T ss_pred HHHHHHHHhh---hhhhcc--hHHHHhhhhcc-cCccCCCHHHHHHHhccccCCcc-hHHHHHHHHHH-hhcccchhhHH
Confidence 1000000000 000000 00000000000 00000000111111111000000 00000000000 00000 001
Q ss_pred HHHHh--hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 253 DIQTI--RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 253 ~~~~l--~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
....+ .++++|+++|+|++|.+++.+..+.+.+. .+.+++++++ ||++++|+|+++++.|.+||+
T Consensus 315 l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 315 MRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 11111 35789999999999999999988888885 4789999998 999999999999999999986
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=225.67 Aligned_cols=275 Identities=13% Similarity=0.115 Sum_probs=172.8
Q ss_pred CccccccCCeEEEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 16 PDAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
...++..+|.+++|..++. ++++||++||++++...|..++..|.+ +||+|+++|+
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~----------------------~g~~v~~~D~ 89 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFH----------------------LGYDVLIIDH 89 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHH----------------------CCCeEEEEcC
Confidence 3566778999999999874 456899999999998889999988876 6999999999
Q ss_pred CCCCCCCCCCCC----CccchHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 94 RGMGRSSVPVKK----TEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 94 ~G~G~S~~~~~~----~~~~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
||||.|+.+... ...+++++++|+.++++.+ +..+++++||||||.+++.++..+|++++++|+++|.....
T Consensus 90 ~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~ 169 (330)
T PRK10749 90 RGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIV 169 (330)
T ss_pred CCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccC
Confidence 999999754321 2357899999999999886 55789999999999999999999999999999998864221
Q ss_pred CCCCccchhhhHHHHhhcccCCHHHHhh--cCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC-CCcchhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAA--VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN-YGFDGQIH 242 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (351)
...+. ............. ...... ................ .........+.+.+........ ........
T Consensus 170 ~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PRK10749 170 LPLPS---WMARRILNWAEGH-PRIRDGYAIGTGRWRPLPFAINVL---THSRERYRRNLRFYADDPELRVGGPTYHWVR 242 (330)
T ss_pred CCCCc---HHHHHHHHHHHHh-cCCCCcCCCCCCCCCCCCcCCCCC---CCCHHHHHHHHHHHHhCCCcccCCCcHHHHH
Confidence 11111 1101110000000 000000 0000000000000000 0001111111121111110000 00000010
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC------CCceEEEcCC-CccccccCh---HHHHH
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPG-GHLVSHERT---EEVNQ 312 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~g-gH~~~~~~p---~~~~~ 312 (351)
... .........+.++++|+|+|+|++|.+++++.++.+.+.+. ++++++++++ ||.++.|.+ +++.+
T Consensus 243 ~~~--~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~ 320 (330)
T PRK10749 243 ESI--LAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALN 320 (330)
T ss_pred HHH--HHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHH
Confidence 000 00112235567889999999999999999999998888652 3568999998 999998875 67889
Q ss_pred HHHHHHHhc
Q 018750 313 ALIDLIKAS 321 (351)
Q Consensus 313 ~i~~fl~~~ 321 (351)
.|.+||++.
T Consensus 321 ~i~~fl~~~ 329 (330)
T PRK10749 321 AIVDFFNRH 329 (330)
T ss_pred HHHHHHhhc
Confidence 999999764
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=221.68 Aligned_cols=239 Identities=19% Similarity=0.305 Sum_probs=158.4
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .+++++++
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~s~~~~---~~~~~~~~ 68 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVN-----------------------DHDIIQVDMRNHGLSPRDP---VMNYPAMA 68 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhh-----------------------CCeEEEECCCCCCCCCCCC---CCCHHHHH
Confidence 456899999999999999999999987 8999999999999998653 57899999
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhc
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
+|+.++++.++.++++++||||||.+++.+|..+|++|+++|++++.+.... ........... ...... .
T Consensus 69 ~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~--~~~~~~~~~~~-~~~~~~------~- 138 (255)
T PRK10673 69 QDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH--VRRHDEIFAAI-NAVSEA------G- 138 (255)
T ss_pred HHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc--chhhHHHHHHH-HHhhhc------c-
Confidence 9999999999989999999999999999999999999999999986532110 00000000000 000000 0
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCcc
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 274 (351)
..........+..... ...........+.. ..+.+. ....+...........++.+++|+|+|+|++|..
T Consensus 139 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~ 208 (255)
T PRK10673 139 ATTRQQAAAIMRQHLN----EEGVIQFLLKSFVD----GEWRFN--VPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPY 208 (255)
T ss_pred cccHHHHHHHHHHhcC----CHHHHHHHHhcCCc----ceeEee--HHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCC
Confidence 0000000001111000 00000000000000 000000 0000000000001123567789999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
++.+..+.+.+.+ ++.+++++++ ||++++++|+++++.|.+||.+
T Consensus 209 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 209 VTEAYRDDLLAQF-PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCHHHHHHHHHhC-CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 9999999998875 8999999998 9999999999999999999975
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=220.39 Aligned_cols=257 Identities=17% Similarity=0.187 Sum_probs=164.5
Q ss_pred ccccCCeEEEEEEcCCC---CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 19 ALNDNGIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~---~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+++.+|.+|+|..+.++ ++.|+++||+++++..|..+++.|.+ +||+|+++|+||
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~----------------------~g~~via~D~~G 62 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISS----------------------LGILVFSHDHIG 62 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHh----------------------CCCEEEEccCCC
Confidence 56678999999876542 34566779999999999999999987 699999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
||.|+.... ...++.++++|+.+.++.+ ..++++|+||||||.+|+.+|.++|++++++|+++|.... ...+.
T Consensus 63 ~G~S~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~-~~~~~- 139 (276)
T PHA02857 63 HGRSNGEKM-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA-EAVPR- 139 (276)
T ss_pred CCCCCCccC-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc-ccccH-
Confidence 999975321 2235666777777777654 3358999999999999999999999999999999985321 00000
Q ss_pred chhhhHHH-HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 172 DLQTLSIA-IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 172 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
...+... ....... ..........+ ... .... ..+. .......... ......... ...
T Consensus 140 -~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~~--~~~~-~~~~--~~~~~~~~~~-~~~~~~~~~--~~~ 198 (276)
T PHA02857 140 -LNLLAAKLMGIFYPN--------KIVGKLCPESV----SRD--MDEV-YKYQ--YDPLVNHEKI-KAGFASQVL--KAT 198 (276)
T ss_pred -HHHHHHHHHHHhCCC--------CccCCCCHhhc----cCC--HHHH-HHHh--cCCCccCCCc-cHHHHHHHH--HHH
Confidence 0000000 0000000 00000000000 000 0000 0000 0000000000 000000000 011
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccCh---HHHHHHHHHHHHhc
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKAS 321 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p---~~~~~~i~~fl~~~ 321 (351)
......+.++++|+|+|+|++|.++|++.++++.+.+.++.+++++++ ||.++.|.+ +++.+.|.+||+..
T Consensus 199 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 199 NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 233456788999999999999999999999999998756789999998 999998865 57999999999875
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=227.06 Aligned_cols=268 Identities=18% Similarity=0.207 Sum_probs=164.8
Q ss_pred ccccccCCeEEEEEEcCC-CCCeEEEEecCCCCcc------------chHHHHH---HhcCCCCCCCCchhhhcccccCC
Q 018750 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHD------------AWGPQLK---GLAGTDKPNDDDETILQDSVESG 80 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~------------~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~ 80 (351)
..+.+.+|.+++|...|+ +.| +||+||+.++.. .|.+++. .|..
T Consensus 38 ~~~~~~~~~~l~y~~~G~~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~------------------- 97 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPAGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP------------------- 97 (343)
T ss_pred ecCCCCCCceEEEEEeccCCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCc-------------------
Confidence 344566899999999996 555 777777666654 5777775 4532
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcce-EEEEEchhhHHHHHHHHhCCcccceEEEec
Q 018750 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (351)
Q Consensus 81 ~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v-~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (351)
++|+||++|+||||.|.. ..++++++++|+.+++++++.+++ +|+||||||++|+.+|.++|++|+++|+++
T Consensus 98 ---~~~~Vi~~Dl~G~g~s~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~ 170 (343)
T PRK08775 98 ---ARFRLLAFDFIGADGSLD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVS 170 (343)
T ss_pred ---cccEEEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEEC
Confidence 389999999999998842 246789999999999999998764 799999999999999999999999999999
Q ss_pred cCCCCCCCCCccchhhhHHHHhhc---c-cC--CHHH---HhhcCccccccHHHHHHhhcCCch-----hhhhHHHHHhh
Q 018750 160 VTGGGFQCCPKLDLQTLSIAIRFF---R-AK--TPEK---RAAVDLDTHYSQEYLEEYVGSSTR-----RAILYQEYVKG 225 (351)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 225 (351)
+..... +. ........+.. . .. .... ..............+...+..... .......+...
T Consensus 171 s~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (343)
T PRK08775 171 GAHRAH---PY--AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDA 245 (343)
T ss_pred ccccCC---HH--HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHH
Confidence 863210 00 00011000000 0 00 0000 000000000001111111111000 00000111100
Q ss_pred hh--hccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcC-C-Ccc
Q 018750 226 IS--ATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G-GHL 301 (351)
Q Consensus 226 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-g-gH~ 301 (351)
.. .........+...... . ......+.++++|+|+|+|++|.++|++..+++.+.+.+++++++++ + ||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~ 319 (343)
T PRK08775 246 AGAQYVARTPVNAYLRLSES-----I-DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHD 319 (343)
T ss_pred HHHHHHHhcChhHHHHHHHH-----H-hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHH
Confidence 00 0000000000000000 0 00011357889999999999999999999999998776789999997 4 999
Q ss_pred ccccChHHHHHHHHHHHHhcC
Q 018750 302 VSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 302 ~~~~~p~~~~~~i~~fl~~~~ 322 (351)
+++|+|++|++.|.+||++..
T Consensus 320 ~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 320 AFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred HHhcCHHHHHHHHHHHHHhcc
Confidence 999999999999999998764
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=217.06 Aligned_cols=255 Identities=13% Similarity=0.093 Sum_probs=167.1
Q ss_pred cCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 22 ~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
-+|.+++|.+.+.++|+|||+||++++...|.++...|.+ +||+|+++|+||||.|..
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~dl~g~G~s~~ 61 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMEN----------------------SGYKVTCIDLKSAGIDQS 61 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHh----------------------CCCEEEEecccCCCCCCC
Confidence 4688899988766677899999999999999999999986 599999999999998854
Q ss_pred CCCCCccchHhHHHHHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHH
Q 018750 102 PVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
... ..++++++++++.++++.++ .++++|+||||||+++..++.++|++|+++|++++.... ..... .....
T Consensus 62 ~~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~----~g~~~--~~~~~ 134 (273)
T PLN02211 62 DAD-SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK----LGFQT--DEDMK 134 (273)
T ss_pred Ccc-cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC----CCCCH--HHHHh
Confidence 332 34789999999999999985 479999999999999999999999999999999875321 00000 00000
Q ss_pred hhcccCCHH-H-----Hhh----cCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 181 RFFRAKTPE-K-----RAA----VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 181 ~~~~~~~~~-~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
......... . ... .........++....+.... ...... +........... .+ ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~-----------~~ 199 (273)
T PLN02211 135 DGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMS-PQEDST-LAAMLLRPGPIL--AL-----------RS 199 (273)
T ss_pred ccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCC-CHHHHH-HHHHhcCCcCcc--cc-----------cc
Confidence 000000000 0 000 00000011122222111111 111111 111110000000 00 00
Q ss_pred HHHHHHhhcc-CccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 251 QKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 251 ~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
........++ ++|+++|.|++|.++|++.++.+.+.+ ++.+++.+++||.+++++|+++.+.|.++....
T Consensus 200 ~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~-~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 200 ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW-PPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhC-CccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 0011112334 789999999999999999999999986 777899998899999999999999999987654
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=218.04 Aligned_cols=245 Identities=28% Similarity=0.419 Sum_probs=165.6
Q ss_pred EEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC
Q 018750 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (351)
Q Consensus 27 l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (351)
++|...|+ ++|+|||+||++.+...|.++++.|.. ||+|+++|+||||.|+.+.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~- 57 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-----------------------DFRVLRYDKRGHGLSDAPE- 57 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-----------------------ccEEEEecCCCCCCCCCCC-
Confidence 57777775 567899999999999999999999986 9999999999999997654
Q ss_pred CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcc
Q 018750 105 KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (351)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (351)
..++++++++++.++++.++.++++++||||||++++.+|.++|++|+++|++++..... .............
T Consensus 58 -~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~------~~~~~~~~~~~~~ 130 (251)
T TIGR02427 58 -GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIG------TPESWNARIAAVR 130 (251)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccC------chhhHHHHHhhhh
Confidence 467899999999999999998999999999999999999999999999999998653210 0000000000000
Q ss_pred cCCHHHHhhcCccccccHHHHHHhhcCCch--hhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCc
Q 018750 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (351)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (351)
...... ........++..... .......+...+..... ..+.. .+......+....+.++++
T Consensus 131 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~ 194 (251)
T TIGR02427 131 AEGLAA---------LADAVLERWFTPGFREAHPARLDLYRNMLVRQPP---DGYAG----CCAAIRDADFRDRLGAIAV 194 (251)
T ss_pred hccHHH---------HHHHHHHHHcccccccCChHHHHHHHHHHHhcCH---HHHHH----HHHHHhcccHHHHhhhcCC
Confidence 000000 000001111100000 00011111111110000 00000 0000011223456778899
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
|+++++|++|.++|.+..+.+.+.+ ++.+++++++ ||++++++|+++.+.|.+|++
T Consensus 195 Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHHHHHHHHhC-CCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999999999998876 8889999997 999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=226.66 Aligned_cols=273 Identities=18% Similarity=0.133 Sum_probs=162.4
Q ss_pred cccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHHHH---HHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
.+.+|.+++|...|+ ++|+||++||++++...|..++ +.|.. ++|+||++|
T Consensus 21 ~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D 78 (339)
T PRK07581 21 ATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDP----------------------EKYFIIIPN 78 (339)
T ss_pred CCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCc----------------------CceEEEEec
Confidence 455789999999986 3355777777777766665433 24443 489999999
Q ss_pred CCCCCCCCCCCCC-CccchHh-----HHHHHHH----HHHHhCCcc-eEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 93 NRGMGRSSVPVKK-TEYTTKI-----MAKDVIA----LMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 93 ~~G~G~S~~~~~~-~~~~~~~-----~~~dl~~----~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+||||.|+.+... ..+++++ +++|+.+ +++++++++ ++||||||||++|+.+|.++|++|+++|++++.
T Consensus 79 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 79 MFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 9999999865421 1344433 4556654 778899999 479999999999999999999999999999876
Q ss_pred CCCCCCCCccchhhhHHHHhhccc--C--------CHH-HHhh---cCccccccHHHHHHhhcCCc---hhhhhHHHHHh
Q 018750 162 GGGFQCCPKLDLQTLSIAIRFFRA--K--------TPE-KRAA---VDLDTHYSQEYLEEYVGSST---RRAILYQEYVK 224 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~-~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 224 (351)
.... .............+.. . .+. .... ......+...++........ ...........
T Consensus 159 ~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK07581 159 AKTT----PHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWE 234 (339)
T ss_pred CCCC----HHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHH
Confidence 3210 0000000000000000 0 000 0000 00000001111111000000 00011111111
Q ss_pred hhhhccCCCCCCcchhhhhhhcc----cC--CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC
Q 018750 225 GISATGMQSNYGFDGQIHACWMH----KM--TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g 298 (351)
..... .....+...+...... .. ..+....++++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++
T Consensus 235 ~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~~ 311 (339)
T PRK07581 235 GNFLP--RDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIES 311 (339)
T ss_pred Hhhcc--cCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeCC
Confidence 11000 0001111111111100 00 12455778899999999999999999999999998876 8899999984
Q ss_pred --CccccccChHHHHHHHHHHHHhc
Q 018750 299 --GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 299 --gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
||++++++++++.+.|.+||++.
T Consensus 312 ~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 312 IWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CCCccccccCcHHHHHHHHHHHHHH
Confidence 99999999999999999999874
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=221.15 Aligned_cols=256 Identities=25% Similarity=0.300 Sum_probs=165.7
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
.+|+||++|||+++...|+.++..|.+. .|++|+++|++|+|.++..+....|+..+++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~---------------------~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v 115 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKA---------------------KGLRVLAIDLPGHGYSSPLPRGPLYTLRELV 115 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccc---------------------cceEEEEEecCCCCcCCCCCCCCceehhHHH
Confidence 3567999999999999999999999981 2599999999999965555544679999999
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEec---cCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN---VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
+.+..++...+.++++++|||+||.+|+.+|..+|+.|+++|+++ +..... +..... .............
T Consensus 116 ~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~ 188 (326)
T KOG1454|consen 116 ELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYST---PKGIKG----LRRLLDKFLSALE 188 (326)
T ss_pred HHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccC---CcchhH----HHHhhhhhccHhh
Confidence 999999999998999999999999999999999999999999444 432111 111111 1111111110000
Q ss_pred hhcCc----c-ccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh-hhhhhcccCC--HHHHHHhhccC-c
Q 018750 192 AAVDL----D-THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ-IHACWMHKMT--QKDIQTIRSAG-F 262 (351)
Q Consensus 192 ~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~l~~i~-~ 262 (351)
..... . ..+...................+.......... ...+... .......... ......+.++. |
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 265 (326)
T KOG1454|consen 189 LLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPV---KEHFHRDARLSLFLELLGFDENLLSLIKKIWKC 265 (326)
T ss_pred hcCccccccchhheeHhhhcceeeeccccccchhhhhhheeccc---ccchhhhheeeEEEeccCccchHHHhhccccCC
Confidence 00000 0 001111111111111111111111111111100 0000000 0000001111 23345566776 9
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
|+|+++|++|.++|.+.++.+.+++ ++++++++++ ||.+++|.|+++++.|..|+....
T Consensus 266 pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 266 PVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred ceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999987 9999999997 999999999999999999998753
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=215.08 Aligned_cols=240 Identities=17% Similarity=0.146 Sum_probs=153.3
Q ss_pred CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
|+++|+|||+||++++...|..+.+.|.+ +|+|+++|+||+|.|.... .+++++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~d~~G~G~s~~~~---~~~~~~ 54 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-----------------------HFTLHLVDLPGHGRSRGFG---PLSLAD 54 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-----------------------CeEEEEecCCcCccCCCCC---CcCHHH
Confidence 45657899999999999999999999987 8999999999999987543 457788
Q ss_pred HHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC--CC-ccchhhhHHHHhhcccCCHH
Q 018750 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CP-KLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 189 (351)
+++++.+.++ ++++++||||||.+++.++.++|++++++|++++....... .+ .............+...
T Consensus 55 ~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 127 (245)
T TIGR01738 55 AAEAIAAQAP----DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDD--- 127 (245)
T ss_pred HHHHHHHhCC----CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhh---
Confidence 8877765542 68999999999999999999999999999999876421100 00 00000000000000000
Q ss_pred HHhhcCccccccHHHHH-HhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 190 KRAAVDLDTHYSQEYLE-EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
... ....+.. ......... .....+...+....... ...+...+......+....+.++++|+++++
T Consensus 128 ~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 195 (245)
T TIGR01738 128 YQR-------TIERFLALQTLGTPTAR-QDARALKQTLLARPTPN----VQVLQAGLEILATVDLRQPLQNISVPFLRLY 195 (245)
T ss_pred HHH-------HHHHHHHHHHhcCCccc-hHHHHHHHHhhccCCCC----HHHHHHHHHHhhcccHHHHHhcCCCCEEEEe
Confidence 000 0000000 001110000 00111111111000000 0011111111111233456788999999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+
T Consensus 196 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 196 GYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred ecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999888875 8999999997 99999999999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-29 Score=219.68 Aligned_cols=264 Identities=15% Similarity=0.165 Sum_probs=165.5
Q ss_pred ccccccCCeEEEEEEcCC-----CCCeEEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 17 DAALNDNGIKIFYRTYGR-----GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-----~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
..+...+|.+|+|+.+++ .+++|||+||++.+. ..|..+...|.+ +||+|++
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~----------------------~Gy~V~~ 92 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQ----------------------MGFACFA 92 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHh----------------------CCCEEEE
Confidence 355666999999987653 234699999998664 356677777876 6999999
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC------cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
+|+||||.|+.... ...+++++++|+.++++.++. .+++|+||||||.+++.++.++|++|+++|++++....
T Consensus 93 ~D~rGhG~S~~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 93 LDLEGHGRSEGLRA-YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKI 171 (330)
T ss_pred ecCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccC
Confidence 99999999975432 245788999999999998753 36999999999999999999999999999999986422
Q ss_pred CCCCC-ccchhhh-HHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhh
Q 018750 165 FQCCP-KLDLQTL-SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (351)
Q Consensus 165 ~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
..... ....... .....+...... . ... ..+ ....... ....... .......... ......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~-----~~~----~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~~~ 234 (330)
T PLN02298 172 SDKIRPPWPIPQILTFVARFLPTLAI----V-PTA-----DLL----EKSVKVP-AKKIIAK-RNPMRYNGKP-RLGTVV 234 (330)
T ss_pred CcccCCchHHHHHHHHHHHHCCCCcc----c-cCC-----Ccc----cccccCH-HHHHHHH-hCccccCCCc-cHHHHH
Confidence 11100 0000000 000011100000 0 000 000 0000000 0000000 0000000000 000000
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccChH----HHHHHHHH
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTE----EVNQALID 316 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p~----~~~~~i~~ 316 (351)
.... ........+.++++|+|+|+|++|.++|++.++.+++.+. ++++++++++ ||.++.++|+ ++.+.|.+
T Consensus 235 ~~~~--~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~ 312 (330)
T PLN02298 235 ELLR--VTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILS 312 (330)
T ss_pred HHHH--HHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHH
Confidence 0000 0112345678899999999999999999999999988763 4789999998 9999988875 47788899
Q ss_pred HHHhcC
Q 018750 317 LIKASE 322 (351)
Q Consensus 317 fl~~~~ 322 (351)
||.+..
T Consensus 313 fl~~~~ 318 (330)
T PLN02298 313 WLNERC 318 (330)
T ss_pred HHHHhc
Confidence 998864
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=224.56 Aligned_cols=283 Identities=19% Similarity=0.181 Sum_probs=167.5
Q ss_pred cccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHHH---------HHHhcCCCCCCCCchhhhcccccCCCCCCCe
Q 018750 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQ---------LKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (351)
.+++|.+++|..+|+ +.|+|||+||+++++..|..+ +..+....+++ ..++|
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l---------------~~~~~ 92 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPI---------------DTDRY 92 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCcc---------------Cccce
Confidence 456788999999985 257899999999999764332 33332111111 11599
Q ss_pred EEEEecCCCC-CCCCCCCC------------CCccchHhHHHHHHHHHHHhCCcc-eEEEEEchhhHHHHHHHHhCCccc
Q 018750 87 EVCAFDNRGM-GRSSVPVK------------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERV 152 (351)
Q Consensus 87 ~vi~~D~~G~-G~S~~~~~------------~~~~~~~~~~~dl~~~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v 152 (351)
+||++|++|+ |.|+.+.. ...++++++++++.+++++++.++ ++++||||||++++.+|.++|++|
T Consensus 93 ~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 172 (379)
T PRK00175 93 FVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRV 172 (379)
T ss_pred EEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhh
Confidence 9999999983 54433221 025799999999999999999998 589999999999999999999999
Q ss_pred ceEEEeccCCCCCCCCCccchhhhHH-HHhhccc-------------CCHH-H--Hhh-cCccccccHHHHHHhhcCCch
Q 018750 153 LSLALLNVTGGGFQCCPKLDLQTLSI-AIRFFRA-------------KTPE-K--RAA-VDLDTHYSQEYLEEYVGSSTR 214 (351)
Q Consensus 153 ~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~ 214 (351)
+++|++++...... ....+.. ....... ..+. . ... ...........+...+.....
T Consensus 173 ~~lvl~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~ 247 (379)
T PRK00175 173 RSALVIASSARLSA-----QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQ 247 (379)
T ss_pred hEEEEECCCcccCH-----HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcccc
Confidence 99999997642110 0000000 0000000 0000 0 000 000000000011111110000
Q ss_pred hh---------hhHHHHHhhhhh--ccCCCCCCcchhhhhhhccc----CCHHHHHHhhccCccEEEEeecCCccCCHHH
Q 018750 215 RA---------ILYQEYVKGISA--TGMQSNYGFDGQIHACWMHK----MTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (351)
Q Consensus 215 ~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 279 (351)
.. ...+.+...... ........+........... ...+..+.+++|++|+|+|+|++|.++|++.
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~ 327 (379)
T PRK00175 248 SGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPAR 327 (379)
T ss_pred ccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHH
Confidence 00 001111100000 00000000000000100000 0023457889999999999999999999999
Q ss_pred HHHHHHHhCCCc----eEEEcC-C-CccccccChHHHHHHHHHHHHhcCC
Q 018750 280 ARRLAEKLYPVA----RMIDLP-G-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 280 ~~~~~~~~~~~~----~~~~~~-g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
++++.+.+ +++ ++++++ + ||++++|+|+++++.|.+||++...
T Consensus 328 ~~~la~~i-~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 328 SREIVDAL-LAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred HHHHHHHH-HhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 99999987 665 777774 6 9999999999999999999998654
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=225.41 Aligned_cols=270 Identities=20% Similarity=0.212 Sum_probs=164.4
Q ss_pred cccCCeEEEEEEcCC----CCCeEEEEecCCCCcc-----------chHHHHH---HhcCCCCCCCCchhhhcccccCCC
Q 018750 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHD-----------AWGPQLK---GLAGTDKPNDDDETILQDSVESGD 81 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~-----------~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~ 81 (351)
.+.+|.+|+|..+|+ +.|+|||+||+++++. .|..++. .|..
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-------------------- 70 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-------------------- 70 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC--------------------
Confidence 456789999999984 3568999999999763 2555541 2322
Q ss_pred CCCCeEEEEecCCC--CCCCCCCC----C------CCccchHhHHHHHHHHHHHhCCcc-eEEEEEchhhHHHHHHHHhC
Q 018750 82 GGAGIEVCAFDNRG--MGRSSVPV----K------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 82 ~~~g~~vi~~D~~G--~G~S~~~~----~------~~~~~~~~~~~dl~~~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~ 148 (351)
++|+|+++|+|| ||.|.... . ...++++++++++.+++++++.++ ++++||||||++++.+|.++
T Consensus 71 --~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 71 --DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred --CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 599999999999 56554311 0 125789999999999999999998 99999999999999999999
Q ss_pred CcccceEEEeccCCCCCCCCCccchhh--hHH-HHhhcccCC------------HH-HH---hhcCccccccHHHHHHhh
Q 018750 149 PERVLSLALLNVTGGGFQCCPKLDLQT--LSI-AIRFFRAKT------------PE-KR---AAVDLDTHYSQEYLEEYV 209 (351)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~------------~~-~~---~~~~~~~~~~~~~~~~~~ 209 (351)
|++|+++|++++... ..... ... ....+.... +. .. ...........+.+...+
T Consensus 149 p~~v~~lvl~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f 221 (351)
T TIGR01392 149 PERVRAIVVLATSAR-------HSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERF 221 (351)
T ss_pred hHhhheEEEEccCCc-------CCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHh
Confidence 999999999998632 11110 000 000000000 00 00 000000000111111111
Q ss_pred cCCchhh----------hhHHHHHhhhhhccC--CCCCCcchhhhhhhcccC---CHHHHHHhhccCccEEEEeecCCcc
Q 018750 210 GSSTRRA----------ILYQEYVKGISATGM--QSNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVI 274 (351)
Q Consensus 210 ~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlii~g~~D~~ 274 (351)
....... ...+.+......... .....+............ ..+..+.+++|++|+|+|+|++|.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~ 301 (351)
T TIGR01392 222 GRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWL 301 (351)
T ss_pred CcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccc
Confidence 1110000 000111100000000 000000000001100001 0234578889999999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEE-----EcCC-CccccccChHHHHHHHHHHHH
Q 018750 275 AQICYARRLAEKLYPVARMI-----DLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~-----~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
+|++.++.+.+.+ ++.+++ ++++ ||++++++|+++++.|.+||+
T Consensus 302 ~p~~~~~~~a~~i-~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 302 FPPAESRELAKAL-PAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cCHHHHHHHHHHH-hhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999987 776655 5566 999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-29 Score=211.02 Aligned_cols=235 Identities=16% Similarity=0.149 Sum_probs=147.5
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.|+|||+||+++++..|..+++.| + +|+|+++|+||||.|+.+. ..+++++++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-----------------------~~~vi~~D~~G~G~S~~~~---~~~~~~~~~ 54 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-----------------------DYPRLYIDLPGHGGSAAIS---VDGFADVSR 54 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-----------------------CCCEEEecCCCCCCCCCcc---ccCHHHHHH
Confidence 467999999999999999999987 4 7999999999999998664 348899999
Q ss_pred HHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc-cceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhc
Q 018750 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 116 dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
|+.++++.++.++++++||||||.+|+.+|.++|+. |++++++++... ......... +.... .......
T Consensus 55 ~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~-------~~~~~~~~~-~~~~~--~~~~~~~ 124 (242)
T PRK11126 55 LLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG-------LQNAEERQA-RWQND--RQWAQRF 124 (242)
T ss_pred HHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC-------CCCHHHHHH-HHhhh--HHHHHHh
Confidence 999999999999999999999999999999999765 999999876531 111000000 00000 0000000
Q ss_pred CccccccHHHHHHhhcCCc---hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecC
Q 018750 195 DLDTHYSQEYLEEYVGSST---RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 271 (351)
. .......+..++.... ........+....... ........... .......+..+.+.++++|+++|+|++
T Consensus 125 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~P~lii~G~~ 198 (242)
T PRK11126 125 R--QEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNN---NGAAVAAMLEA-TSLAKQPDLRPALQALTFPFYYLCGER 198 (242)
T ss_pred c--cCcHHHHHHHHHhcchhhccCccHHHHHHHhcccC---CHHHHHHHHHh-cCcccCCcHHHHhhccCCCeEEEEeCC
Confidence 0 0000111111110000 0000000110000000 00000000000 000011234467789999999999999
Q ss_pred CccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 272 DVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 272 D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
|..+. .+.+. .+++++++++ ||+++.|+|+++++.|.+||+.
T Consensus 199 D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 199 DSKFQ-----ALAQQ--LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred cchHH-----HHHHH--hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 98552 23333 3789999998 9999999999999999999964
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=210.24 Aligned_cols=222 Identities=31% Similarity=0.456 Sum_probs=153.1
Q ss_pred EEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHH
Q 018750 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (351)
Q Consensus 39 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (351)
|||+||++++...|..+++.|.+ ||+|+++|+||+|.|+.+.....++++++++|+.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~ 57 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALAR-----------------------GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLA 57 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHT-----------------------TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEecCCccccccccccCCcchhhhhhhhh
Confidence 79999999999999999999975 9999999999999998766434678999999999
Q ss_pred HHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh----hHHHHhhcccCCHHHHhhc
Q 018750 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT----LSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 119 ~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 194 (351)
++++.++.++++++|||+||.+++.++.++|++|+++|++++... ..... .......+.........
T Consensus 58 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-- 128 (228)
T PF12697_consen 58 ELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP-------LPDSPSRSFGPSFIRRLLAWRSRSLR-- 128 (228)
T ss_dssp HHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS-------HHHHHCHHHHHHHHHHHHHHHHHHHH--
T ss_pred hcccccccccccccccccccccccccccccccccccceeeccccc-------ccccccccccchhhhhhhhccccccc--
Confidence 999999999999999999999999999999999999999998731 11000 00011100000000000
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc-cCCHHHHHHhhccCccEEEEeecCCc
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKDIQTIRSAGFLVSVIHGRHDV 273 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~g~~D~ 273 (351)
......+........ .........+. +...+.. ....+....++++++|+++++|++|.
T Consensus 129 ----~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~ 188 (228)
T PF12697_consen 129 ----RLASRFFYRWFDGDE-PEDLIRSSRRA---------------LAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDP 188 (228)
T ss_dssp ----HHHHHHHHHHHTHHH-HHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSS
T ss_pred ----ccccccccccccccc-ccccccccccc---------------cccccccccccccccccccccCCCeEEeecCCCC
Confidence 000001111110000 00000000000 0000000 01234446778889999999999999
Q ss_pred cCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHH
Q 018750 274 IAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~ 313 (351)
+++.+..+.+.+.+ ++++++++++ ||++++++|++++++
T Consensus 189 ~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 189 IVPPESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSHHHHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred CCCHHHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHhcC
Confidence 99999999999876 8999999997 999999999999874
|
... |
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=212.64 Aligned_cols=270 Identities=18% Similarity=0.237 Sum_probs=163.4
Q ss_pred ccccCCeEEEEEEcCC-C-CCeEEEEecCCCCccc-hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 19 ALNDNGIKIFYRTYGR-G-PTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~-~p~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.++.++.++.|...+. + +++|||+||++++... |..+...+.+ .||+|+++|+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~----------------------~g~~vi~~d~~G 63 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKE----------------------EGREVIMYDQLG 63 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHh----------------------cCCEEEEEcCCC
Confidence 4677788888888763 3 4679999998766654 4555555554 489999999999
Q ss_pred CCCCCCCCCCC-ccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 96 MGRSSVPVKKT-EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 96 ~G~S~~~~~~~-~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
||.|..+.... .++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++.... +... .
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~----~~~~-~ 138 (288)
T TIGR01250 64 CGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA----PEYV-K 138 (288)
T ss_pred CCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc----hHHH-H
Confidence 99998654322 3789999999999999999889999999999999999999999999999999875311 0000 0
Q ss_pred hhHHHHhhcccCCHHHHhhcCcccccc----HHHHHHhh----cCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYS----QEYLEEYV----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
........+................+. ......+. .............................. +.. ..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 216 (288)
T TIGR01250 139 ELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNE-FTI-TG 216 (288)
T ss_pred HHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcc-ccc-cc
Confidence 000000000000000000000000000 00010000 000000000000000000000000000000 000 00
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
.....+....+.++++|+++++|++|.+ +++..+.+.+.+ ++.+++++++ ||+++.++|+++++.|.+||+
T Consensus 217 ~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 217 NLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 0011233456788999999999999985 567888888875 8889999997 999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=204.75 Aligned_cols=261 Identities=21% Similarity=0.204 Sum_probs=162.2
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCc--cchHh
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE--YTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~--~~~~~ 112 (351)
..+++|++||+|++...|..-++.|++ .++|+++|++|+|+|++|.-..+ .....
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~-----------------------~~~vyaiDllG~G~SSRP~F~~d~~~~e~~ 145 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAK-----------------------IRNVYAIDLLGFGRSSRPKFSIDPTTAEKE 145 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhh-----------------------cCceEEecccCCCCCCCCCCCCCcccchHH
Confidence 456799999999999999999999997 89999999999999998764222 23457
Q ss_pred HHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC-Cccchhh----hHHHHhhcccCC
Q 018750 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC-PKLDLQT----LSIAIRFFRAKT 187 (351)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~ 187 (351)
+++-|.+.....++++.+|+|||+||.+|..||.+||++|+.|||++|.+...... ....... ............
T Consensus 146 fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~n 225 (365)
T KOG4409|consen 146 FVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFN 225 (365)
T ss_pred HHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCC
Confidence 88889999999999999999999999999999999999999999999987654331 1111111 111111111222
Q ss_pred HHHH--hhcCccccccHHHHHHhhcCC--chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccC--
Q 018750 188 PEKR--AAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG-- 261 (351)
Q Consensus 188 ~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-- 261 (351)
+... ..-.........+....+... .......-++.-............+...+... ........+.+..++
T Consensus 226 Pl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~--g~Ar~Pm~~r~~~l~~~ 303 (365)
T KOG4409|consen 226 PLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPG--GWARRPMIQRLRELKKD 303 (365)
T ss_pred HHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhcc--chhhhhHHHHHHhhccC
Confidence 2111 111111111111111111111 01111111121111111111111111111100 011233445666555
Q ss_pred ccEEEEeecCCccCCHHHHHHHHHHh-CCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 262 FLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 262 ~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
||+++|+|++|.+-. ....++.+.+ ...++.+++++ ||++++++|+.|++.+.++++..
T Consensus 304 ~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 304 VPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred CCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 999999999998755 4444444433 34589999998 99999999999999999998753
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-28 Score=204.23 Aligned_cols=241 Identities=20% Similarity=0.248 Sum_probs=154.2
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
|+|||+||++++...|.++.+.|.+ ||+|+++|+||+|.|+.+.....+++++++++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 58 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGP-----------------------HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQD 58 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcc-----------------------cCeEEEEcCCCCCCCCCCCccChhhHHHHHHH
Confidence 6799999999999999999999986 99999999999999987654456789999999
Q ss_pred -HHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC-CHHHHhhc
Q 018750 117 -VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK-TPEKRAAV 194 (351)
Q Consensus 117 -l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 194 (351)
+..+++.++.++++++||||||.+++.+|.++|++|++++++++..... ...... ....... ........
T Consensus 59 ~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~ 130 (251)
T TIGR03695 59 ILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLA-------TEEERA-ARRQNDEQLAQRFEQE 130 (251)
T ss_pred HHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcC-------chHhhh-hhhhcchhhhhHHHhc
Confidence 7888888888899999999999999999999999999999998753211 000000 0000000 00000000
Q ss_pred CccccccHHHHHHhhcCC------chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 195 DLDTHYSQEYLEEYVGSS------TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
. ...+...+.... .........+....... ........+.. ............+.++++|+++|+
T Consensus 131 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~l~i~ 201 (251)
T TIGR03695 131 G-----LEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN---NPEGLAKMLRA-TGLGKQPSLWPKLQALTIPVLYLC 201 (251)
T ss_pred C-----ccHHHHHHhcCceeeecccCChHHhHHHHHhcccc---cchHHHHHHHH-hhhhcccchHHHhhCCCCceEEEe
Confidence 0 000000000000 00000000011100000 00000000000 000011223355678899999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
|++|..++ +..+.+.+.. ++++++++++ ||++++++|+++++.|.+||+
T Consensus 202 g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 202 GEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred eCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99998774 5566676654 8899999998 999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=213.82 Aligned_cols=254 Identities=27% Similarity=0.354 Sum_probs=167.4
Q ss_pred cccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
.....++.+++|...|+ ..|+|||+||++++...|..+...|.+ +|+|+++|+|||
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~g~ 168 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-----------------------GRPVIALDLPGH 168 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-----------------------CCEEEEEcCCCC
Confidence 35666788999999885 356899999999999999999999987 799999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhh
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (351)
|.|.... ...+++++++++.++++.++.++++++||||||.+++.+|..+|+++.++|++++...... ......
T Consensus 169 G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~----~~~~~~ 242 (371)
T PRK14875 169 GASSKAV--GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPE----INGDYI 242 (371)
T ss_pred CCCCCCC--CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcc----cchhHH
Confidence 9996543 3568999999999999999988999999999999999999999999999999987632111 000000
Q ss_pred HHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhh-hc-ccCCHHH
Q 018750 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHAC-WM-HKMTQKD 253 (351)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 253 (351)
. .+......... ...+...+.... ................ ............ +. .....+.
T Consensus 243 ~---~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 306 (371)
T PRK14875 243 D---GFVAAESRREL----------KPVLELLFADPALVTRQMVEDLLKYKRLD---GVDDALRALADALFAGGRQRVDL 306 (371)
T ss_pred H---HhhcccchhHH----------HHHHHHHhcChhhCCHHHHHHHHHHhccc---cHHHHHHHHHHHhccCcccchhH
Confidence 0 00000000000 000000000000 0000000000000000 000000000000 00 0011234
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
...+.++++|+|+++|++|.++|++..+. +.++.++.++++ ||++++++|+++++.|.+||++
T Consensus 307 ~~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 307 RDRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 45677889999999999999999876554 335688999997 9999999999999999999975
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-27 Score=207.69 Aligned_cols=281 Identities=15% Similarity=0.139 Sum_probs=178.4
Q ss_pred ccCCeEEEEEEcCC----CCCeEEEEecCCCCccch---------HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 018750 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAW---------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 21 ~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~---------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
++...+|.|+++|+ +.++||++|++++++..- ..+++.+...++++|+ ..|.
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt---------------~~yf 101 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDT---------------NKYF 101 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCC---------------CceE
Confidence 34578999999995 347899999999865332 2346788889999999 8899
Q ss_pred EEEecCCCCCCCCCC------------C-------CCCccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHHHHHh
Q 018750 88 VCAFDNRGMGRSSVP------------V-------KKTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAM 147 (351)
Q Consensus 88 vi~~D~~G~G~S~~~------------~-------~~~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~~a~~ 147 (351)
||++|..|-|.|..| . ....++++++++++.++++++++++++ ++||||||++++.+|.+
T Consensus 102 vi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 102 VISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred EEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHH
Confidence 999999987753211 0 123579999999999999999999986 99999999999999999
Q ss_pred CCcccceEEEeccCCCCCCCCCccc-hhhhHHHHhhcccC------------CHH----HHhhcCccccccHHHHHHhhc
Q 018750 148 VPERVLSLALLNVTGGGFQCCPKLD-LQTLSIAIRFFRAK------------TPE----KRAAVDLDTHYSQEYLEEYVG 210 (351)
Q Consensus 148 ~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~~~~~~ 210 (351)
+|++|+++|++++..... ... ..........+... .+. ...........+.+++...+.
T Consensus 182 ~P~~v~~lv~ia~~~~~~----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~ 257 (389)
T PRK06765 182 YPHMVERMIGVIGNPQND----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFP 257 (389)
T ss_pred ChHhhheEEEEecCCCCC----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcC
Confidence 999999999998763211 000 00011011101000 000 000000011122222222211
Q ss_pred CCc----------hhhhhHHHHHhhhhh--ccCCCCCCcchhhhhhhccc---CCHHHHHHhhccCccEEEEeecCCccC
Q 018750 211 SST----------RRAILYQEYVKGISA--TGMQSNYGFDGQIHACWMHK---MTQKDIQTIRSAGFLVSVIHGRHDVIA 275 (351)
Q Consensus 211 ~~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvlii~g~~D~~~ 275 (351)
... ......+.++..... ........+........... ...+..+.+.++++|+|+|+|++|.++
T Consensus 258 r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~ 337 (389)
T PRK06765 258 RNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQ 337 (389)
T ss_pred cCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCC
Confidence 110 001112222222111 00111111111111111111 111456788899999999999999999
Q ss_pred CHHHHHHHHHHhC---CCceEEEcC-C-CccccccChHHHHHHHHHHHHh
Q 018750 276 QICYARRLAEKLY---PVARMIDLP-G-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 276 ~~~~~~~~~~~~~---~~~~~~~~~-g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
|++..+++.+.+. +++++++++ + ||+.++++|+++++.|.+||++
T Consensus 338 p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 338 PPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9999999988773 368999997 4 9999999999999999999975
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=208.06 Aligned_cols=273 Identities=18% Similarity=0.180 Sum_probs=159.8
Q ss_pred EEEEEEcC--CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 26 KIFYRTYG--RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 26 ~l~y~~~g--~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
++++.... .++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+.+.
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~rG~G~S~~~~ 149 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-----------------------RFRVIAIDQLGWGGSSRPD 149 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-----------------------CCEEEEECCCCCCCCCCCC
Confidence 55554433 2457899999999999899888999987 8999999999999998654
Q ss_pred CCCccc----hHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc-h-h---
Q 018750 104 KKTEYT----TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD-L-Q--- 174 (351)
Q Consensus 104 ~~~~~~----~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~-~--- 174 (351)
. ...+ .+.+++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.+.......... . .
T Consensus 150 ~-~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 228 (402)
T PLN02894 150 F-TCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRA 228 (402)
T ss_pred c-ccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcch
Confidence 2 1111 224567788888888889999999999999999999999999999999987643221111000 0 0
Q ss_pred hhH-HHHhhc--ccCCHHHHhhcC--ccccccHHHHHHhhcCCc----hhhhhHHHHHhhhhhccCCCCCCcchhhhhh-
Q 018750 175 TLS-IAIRFF--RAKTPEKRAAVD--LDTHYSQEYLEEYVGSST----RRAILYQEYVKGISATGMQSNYGFDGQIHAC- 244 (351)
Q Consensus 175 ~~~-~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (351)
.+. ...... ....+....... ........+....+.... ........+.+.+.......... ...+...
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 307 (402)
T PLN02894 229 TWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASG-ELCLKYIF 307 (402)
T ss_pred hHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCch-HHHHHHhc
Confidence 000 000000 001111000000 000000111111110000 00000011111110000000000 0000000
Q ss_pred -hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 245 -WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 245 -~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
.......+....+.++++|+++|+|++|.+.+ ....++.+...+.++++++++ ||+++.|+|++|++.|.+|++...
T Consensus 308 ~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 308 SFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred cCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 00001234456678899999999999998876 555556655545688999998 999999999999999999998776
Q ss_pred CC
Q 018750 323 KK 324 (351)
Q Consensus 323 ~~ 324 (351)
..
T Consensus 387 ~~ 388 (402)
T PLN02894 387 SP 388 (402)
T ss_pred cC
Confidence 54
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=206.58 Aligned_cols=258 Identities=19% Similarity=0.218 Sum_probs=162.3
Q ss_pred cccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
...++..++|..+.+ .+++|||+||++++...|..++..|.+ +||+|+++|+||
T Consensus 116 ~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~----------------------~Gy~V~~~D~rG 173 (395)
T PLN02652 116 YGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTS----------------------CGFGVYAMDWIG 173 (395)
T ss_pred ECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHH----------------------CCCEEEEeCCCC
Confidence 344567788777653 346899999999998889999999987 699999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCC----cceEEEEEchhhHHHHHHHHhCCc---ccceEEEeccCCCCCCCC
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~ 168 (351)
||.|+.... ...+++.+++|+.++++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|.....
T Consensus 174 hG~S~~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~--- 248 (395)
T PLN02652 174 HGGSDGLHG-YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK--- 248 (395)
T ss_pred CCCCCCCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc---
Confidence 999986543 345788889999999988753 37999999999999998765 554 799999998753111
Q ss_pred CccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh-cc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-MH 247 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 247 (351)
+. ...............+... ... ... ...............+...+ ...+... ..... ..
T Consensus 249 ~~--~~~~~~~~~l~~~~~p~~~----~~~-~~~----~~~~~s~~~~~~~~~~~dp~------~~~g~i~-~~~~~~~~ 310 (395)
T PLN02652 249 PA--HPIVGAVAPIFSLVAPRFQ----FKG-ANK----RGIPVSRDPAALLAKYSDPL------VYTGPIR-VRTGHEIL 310 (395)
T ss_pred cc--hHHHHHHHHHHHHhCCCCc----ccC-ccc----ccCCcCCCHHHHHHHhcCCC------cccCCch-HHHHHHHH
Confidence 00 0000000000000000000 000 000 00000000000000000000 0000000 00000 00
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-Ccccccc-ChHHHHHHHHHHHHhcC
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASE 322 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl~~~~ 322 (351)
.........+.++++|+|+++|++|.++|++.++++++.+. ++.+++++++ +|.++.+ .++++.+.|.+||....
T Consensus 311 ~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 311 RISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred HHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 01112245678899999999999999999999999998863 3578999998 8998777 79999999999998764
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=200.33 Aligned_cols=120 Identities=26% Similarity=0.322 Sum_probs=98.6
Q ss_pred ccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
+...+|.+++|...|+ +.++|||+||++++...+ .+...+.. ++|+|+++|+||||
T Consensus 9 ~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~----------------------~~~~vi~~D~~G~G 65 (306)
T TIGR01249 9 LNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDP----------------------ETYRIVLFDQRGCG 65 (306)
T ss_pred EEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCc----------------------cCCEEEEECCCCCC
Confidence 3344689999999985 345699999988776543 34444433 48999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
.|+.+.....++.+++++|+..++++++.++++++||||||.+++.++.++|++|+++|++++.
T Consensus 66 ~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 66 KSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 9986543335678899999999999999899999999999999999999999999999999875
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=199.07 Aligned_cols=272 Identities=21% Similarity=0.261 Sum_probs=173.3
Q ss_pred CCccccccCCeEEEEEEcCCC-C--CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 15 APDAALNDNGIKIFYRTYGRG-P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~-~--p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
....+...+|..++|..+... + .+||++||++.+...|..++..|.. +||.|+++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~----------------------~G~~V~~~ 67 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA----------------------RGFDVYAL 67 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHh----------------------CCCEEEEe
Confidence 345678889999999988753 2 4799999999999999999999998 79999999
Q ss_pred cCCCCCCCCC-CCCCCccchHhHHHHHHHHHHHhC----CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 92 DNRGMGRSSV-PVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 92 D~~G~G~S~~-~~~~~~~~~~~~~~dl~~~l~~~~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
|+||||.|.. ... ..-++.++.+|+.++++... ..+++++||||||.+++.++.+++.+|+++|+.+|......
T Consensus 68 D~RGhG~S~r~~rg-~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 68 DLRGHGRSPRGQRG-HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG 146 (298)
T ss_pred cCCCCCCCCCCCcC-CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh
Confidence 9999999973 332 34458999999999998875 25899999999999999999999999999999998742211
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccC-CCCCCcchhhhhhh
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM-QSNYGFDGQIHACW 245 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 245 (351)
...................+. ..... . . ................+.+..... ........++....
T Consensus 147 --~~~~~~~~~~~~~~~~~~~p~----~~~~~--~-~----~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~ 213 (298)
T COG2267 147 --AILRLILARLALKLLGRIRPK----LPVDS--N-L----LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLAL 213 (298)
T ss_pred --hHHHHHHHHHhcccccccccc----cccCc--c-c----ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHH
Confidence 000000000011111111110 00000 0 0 000000000001111111111110 00000001111110
Q ss_pred cccCCHHHHHHhhccCccEEEEeecCCccCC-HHHHHHHHHHh-CCCceEEEcCC-Ccccccc-Ch--HHHHHHHHHHHH
Q 018750 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ-ICYARRLAEKL-YPVARMIDLPG-GHLVSHE-RT--EEVNQALIDLIK 319 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~~-~p--~~~~~~i~~fl~ 319 (351)
.. ...........+++|+|+++|++|.+++ .+...++.+.. .+++++++++| .|.++.| .. +++.+.+.+||.
T Consensus 214 ~a-~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~ 292 (298)
T COG2267 214 LA-GRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLA 292 (298)
T ss_pred Hh-hcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHH
Confidence 00 0011223456778999999999999999 67777777766 35678999999 8988877 45 889999999998
Q ss_pred hcCC
Q 018750 320 ASEK 323 (351)
Q Consensus 320 ~~~~ 323 (351)
+..+
T Consensus 293 ~~~~ 296 (298)
T COG2267 293 EALP 296 (298)
T ss_pred hhcc
Confidence 7643
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-27 Score=240.42 Aligned_cols=257 Identities=16% Similarity=0.238 Sum_probs=164.8
Q ss_pred EEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC
Q 018750 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (351)
Q Consensus 27 l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (351)
++|...|+ +.|+|||+||++++...|.+++..|.+ +|+|+++|+||||.|.....
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-----------------------~~rVi~~Dl~G~G~S~~~~~ 1416 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-----------------------SARCISIDLPGHGGSKIQNH 1416 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEcCCCCCCCCCccc
Confidence 55666675 346899999999999999999999987 89999999999999975431
Q ss_pred ------CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHH
Q 018750 105 ------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (351)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (351)
...++++++++++.+++++++.++++|+||||||.+++.++.++|++|+++|++++.+. ........
T Consensus 1417 ~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~-------~~~~~~~~ 1489 (1655)
T PLN02980 1417 AKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG-------LKDEVARK 1489 (1655)
T ss_pred cccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCc-------cCchHHHH
Confidence 23578999999999999999999999999999999999999999999999999987531 11110000
Q ss_pred HHhhcccCCHHHHhhcCccccccHHHHHHhhcCC-----chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-----TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
................ ....+...++... .......+.....+... ....+...+.. +......+.
T Consensus 1490 ~~~~~~~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~-~~~~~~~dl 1560 (1655)
T PLN02980 1490 IRSAKDDSRARMLIDH-----GLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHK---DVPSLAKLLSD-LSIGRQPSL 1560 (1655)
T ss_pred HHhhhhhHHHHHHHhh-----hHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcC---CHHHHHHHHHH-hhhcccchH
Confidence 0000000000000000 0000011110000 00000000000000000 00000000000 000112234
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC------------ceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV------------ARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~------------~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.+.+.++++|+|+|+|++|.+++ +.++++.+.+ ++ ++++++++ ||++++|+|+++++.|.+||++
T Consensus 1561 ~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i-~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1561 WEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREI-GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHc-cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 46788999999999999999875 6667777765 33 58999998 9999999999999999999998
Q ss_pred cCCC
Q 018750 321 SEKK 324 (351)
Q Consensus 321 ~~~~ 324 (351)
....
T Consensus 1639 ~~~~ 1642 (1655)
T PLN02980 1639 LHNS 1642 (1655)
T ss_pred cccc
Confidence 7654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=226.50 Aligned_cols=268 Identities=18% Similarity=0.258 Sum_probs=164.4
Q ss_pred ccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..++..+|.+++|...|+ +.|+|||+||++++...|.++.+.|.+ +|+|+++|+||
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Vi~~D~~G 61 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-----------------------RFRVVAYDVRG 61 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-----------------------ceEEEEecCCC
Confidence 345677899999999986 457899999999999999999999965 99999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcc-eEEEEEchhhHHHHHHHHhC--CcccceEEEeccCCCCCCCCCccc
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||.|+.+.....++++++++|+..+++.++.++ ++|+||||||.+++.++... ++++..++.++++. ..
T Consensus 62 ~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~--------~~ 133 (582)
T PRK05855 62 AGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPS--------LD 133 (582)
T ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCc--------hH
Confidence 999987654457899999999999999998754 99999999999999887762 34455555444321 00
Q ss_pred hhhhHHHHhhcccCCHHH----Hhhc--------CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCC---CC---
Q 018750 173 LQTLSIAIRFFRAKTPEK----RAAV--------DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ---SN--- 234 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 234 (351)
.... ............. .... ..........+... .... .....+........ ..
T Consensus 134 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~ 206 (582)
T PRK05855 134 HVGF-WLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLG-----LGRA-WPRLLRRVEGTPVDPIPTQTTL 206 (582)
T ss_pred HHHH-HHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccc-----hhhH-HHHhhhhccCCCcchhhhhhhh
Confidence 0000 0000000000000 0000 00000000000000 0000 00000000000000 00
Q ss_pred CCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHH
Q 018750 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQAL 314 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i 314 (351)
......................+..+++|+++|+|++|.++|++..+.+.+.+ ++.+++++++||+++.|+|+++.+.|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i 285 (582)
T PRK05855 207 SDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV-PRLWRREIKAGHWLPMSHPQVLAAAV 285 (582)
T ss_pred ccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccC-CcceEEEccCCCcchhhChhHHHHHH
Confidence 00000000000000000011123458899999999999999999999888765 78888888889999999999999999
Q ss_pred HHHHHhcCC
Q 018750 315 IDLIKASEK 323 (351)
Q Consensus 315 ~~fl~~~~~ 323 (351)
.+|+.....
T Consensus 286 ~~fl~~~~~ 294 (582)
T PRK05855 286 AEFVDAVEG 294 (582)
T ss_pred HHHHHhccC
Confidence 999987653
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-26 Score=186.22 Aligned_cols=263 Identities=19% Similarity=0.183 Sum_probs=175.1
Q ss_pred CccccccCCeEEEEEEcCC---CCC--eEEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 16 PDAALNDNGIKIFYRTYGR---GPT--KVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~---~~p--~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
...+.+.+|.++.+..+-+ .+| .|+++||+++.. ..|..++..|+. .||.|+
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~----------------------~g~~v~ 86 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAK----------------------SGFAVY 86 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHh----------------------CCCeEE
Confidence 3456666888998887764 133 699999999876 678889999998 799999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhC------CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
++|++|||.|++... ..-+++..++|+.++.+... ..+.+++||||||.+++.++.+.|+..+|+|+++|+..
T Consensus 87 a~D~~GhG~SdGl~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 87 AIDYEGHGRSDGLHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred EeeccCCCcCCCCcc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 999999999996553 44578899999999888642 24799999999999999999999999999999999865
Q ss_pred CCCCCCccchhhhHHHHhhcccCCHHHHhhc---CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV---DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
....... ..........+....+...... .....+.............. ...+..+.
T Consensus 166 i~~~~kp--~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl------------------~y~g~pRl 225 (313)
T KOG1455|consen 166 ISEDTKP--HPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPL------------------CYTGKPRL 225 (313)
T ss_pred cCCccCC--CcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCc------------------eecCCccH
Confidence 4332211 1111122222222222111000 00011111111111111000 00000000
Q ss_pred hhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-Cccccc----cChHHHHHHH
Q 018750 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSH----ERTEEVNQAL 314 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~----~~p~~~~~~i 314 (351)
....-......+....+.++++|.+++||++|.+++++.++.+++... .+++++.+|| -|.+.. ++.+.|...|
T Consensus 226 ~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI 305 (313)
T KOG1455|consen 226 KTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDI 305 (313)
T ss_pred HHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHH
Confidence 000000112345667889999999999999999999999999999763 4789999999 898774 3557788999
Q ss_pred HHHHHhc
Q 018750 315 IDLIKAS 321 (351)
Q Consensus 315 ~~fl~~~ 321 (351)
.+||++.
T Consensus 306 ~~Wl~~r 312 (313)
T KOG1455|consen 306 ISWLDER 312 (313)
T ss_pred HHHHHhc
Confidence 9999864
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=180.00 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=173.3
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+.-+.++|.+|+|..+|.|+..|++++|.-++. ..|.+.+..|.+.+ .++|+++|.||
T Consensus 23 e~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l---------------------~~TivawDPpG 81 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPL---------------------QVTIVAWDPPG 81 (277)
T ss_pred hheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCC---------------------ceEEEEECCCC
Confidence 345677999999999999998999999987766 46888888887632 49999999999
Q ss_pred CCCCCCCCCCCcc-chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 96 MGRSSVPVKKTEY-TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 96 ~G~S~~~~~~~~~-~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
+|.|..+...... -....+++...++++++.+++.++|||-||..|+..|.++++.|.++|+.++... ....
T Consensus 82 YG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay-------vn~~ 154 (277)
T KOG2984|consen 82 YGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY-------VNHL 154 (277)
T ss_pred CCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccce-------ecch
Confidence 9999988753322 2345566777888999999999999999999999999999999999999987531 1110
Q ss_pred hhHHHHhhcccCCHHH-HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 175 TLSIAIRFFRAKTPEK-RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
-...+..++...-.. +........+..+.+... ..+|...... +...-...-.
T Consensus 155 -~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~----------wa~wvD~v~q---------------f~~~~dG~fC 208 (277)
T KOG2984|consen 155 -GAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQ----------WAAWVDVVDQ---------------FHSFCDGRFC 208 (277)
T ss_pred -hHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHH----------HHHHHHHHHH---------------HhhcCCCchH
Confidence 000111111100000 000011111222222111 1122221111 0000011112
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.-.+.+++||+||+||+.|++++...+..+.... +.+++.+.+. +|.+++..+++|+..+.+||++.
T Consensus 209 r~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 209 RLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhhcccccCCeeEeeCCcCCCCCCCCccchhhhc-ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 3467899999999999999999988888888864 8999999985 99999999999999999999875
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=173.69 Aligned_cols=222 Identities=18% Similarity=0.215 Sum_probs=150.4
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
..|||+||+.|+....+.+.+.|.+ +||+|.+|.+||||.....- ...++++|.++
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e----------------------~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~ 71 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNE----------------------NGYTVYAPRYPGHGTLPEDF--LKTTPRDWWED 71 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHH----------------------CCceEecCCCCCCCCCHHHH--hcCCHHHHHHH
Confidence 5799999999999999999999998 79999999999999885322 34567777777
Q ss_pred HHHHHHH---hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhh
Q 018750 117 VIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (351)
Q Consensus 117 l~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (351)
+.+..+. .|.+.|.++|-||||.+++.+|..+| ++++|.++++..... ....+.....++.. ....
T Consensus 72 v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~-----~~~iie~~l~y~~~----~kk~ 140 (243)
T COG1647 72 VEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS-----WRIIIEGLLEYFRN----AKKY 140 (243)
T ss_pred HHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccccc-----chhhhHHHHHHHHH----hhhc
Confidence 6655554 46789999999999999999999998 899999997631110 01111111111100 0000
Q ss_pred cCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCc
Q 018750 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (351)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 273 (351)
...........+..+-..... ...++ ..+..+....+..|..|++++.|++|+
T Consensus 141 e~k~~e~~~~e~~~~~~~~~~---~~~~~------------------------~~~i~~~~~~~~~I~~pt~vvq~~~D~ 193 (243)
T COG1647 141 EGKDQEQIDKEMKSYKDTPMT---TTAQL------------------------KKLIKDARRSLDKIYSPTLVVQGRQDE 193 (243)
T ss_pred cCCCHHHHHHHHHHhhcchHH---HHHHH------------------------HHHHHHHHhhhhhcccchhheecccCC
Confidence 000000001111111100000 00000 012234456778899999999999999
Q ss_pred cCCHHHHHHHHHHhC-CCceEEEcCC-Ccccccc-ChHHHHHHHHHHHHh
Q 018750 274 IAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKA 320 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl~~ 320 (351)
++|.+.++.+.+.+. ...++.++++ ||.+..+ ..+.+.+.+..||+.
T Consensus 194 mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 194 MVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999999999999874 4678999998 9988776 678999999999963
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-26 Score=202.80 Aligned_cols=265 Identities=18% Similarity=0.220 Sum_probs=153.5
Q ss_pred ccccCCeEEEEEEc-------CCCCCeEEEEecCCCCccc-h-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 19 ALNDNGIKIFYRTY-------GRGPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 19 ~~~~~g~~l~y~~~-------g~~~p~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
....||..+.+.-. ..++|+||++||+++++.. | ..++..+.+ +||+|+
T Consensus 76 l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~----------------------~g~~vv 133 (388)
T PLN02511 76 LRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARS----------------------KGWRVV 133 (388)
T ss_pred EECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH----------------------CCCEEE
Confidence 34456777664221 2356789999999877643 4 456655555 599999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC----cceEEEEEchhhHHHHHHHHhCCcc--cceEEEeccCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGG 163 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~ 163 (351)
++|+||||.|..... .+....+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++..
T Consensus 134 ~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 134 VFNSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred EEecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 999999999975432 23345677888888887754 5899999999999999999999987 888888876421
Q ss_pred CCCCCCccchhhhHHHH-hhcccCCHHHHhhcCccccccHHHHHHhhcCCch----hhhhHHHHHhhhhhccCCCCCCcc
Q 018750 164 GFQCCPKLDLQTLSIAI-RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR----RAILYQEYVKGISATGMQSNYGFD 238 (351)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
.. .....+.... ................ .....+......... ......++.+.+.. ...++.
T Consensus 212 l~-----~~~~~~~~~~~~~y~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~----~~~gf~ 279 (388)
T PLN02511 212 LV-----IADEDFHKGFNNVYDKALAKALRKIFA---KHALLFEGLGGEYNIPLVANAKTVRDFDDGLTR----VSFGFK 279 (388)
T ss_pred HH-----HHHHHHhccHHHHHHHHHHHHHHHHHH---HHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhh----hcCCCC
Confidence 00 0000000000 0000000000000000 000000000000000 00001111111111 011111
Q ss_pred hhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-CccccccChHH------H
Q 018750 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEE------V 310 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~------~ 310 (351)
... .++. ..+....+++|++|+|+|+|++|+++|++.. ....+. .++++++++++ ||+.++|.|+. +
T Consensus 280 ~~~-~yy~---~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~-~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~ 354 (388)
T PLN02511 280 SVD-AYYS---NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA-NPNCLLIVTPSGGHLGWVAGPEAPFGAPWT 354 (388)
T ss_pred CHH-HHHH---HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc-CCCEEEEECCCcceeccccCCCCCCCCccH
Confidence 111 1111 1122357788999999999999999997765 345554 48999999997 99999999875 5
Q ss_pred HHHHHHHHHhcCCC
Q 018750 311 NQALIDLIKASEKK 324 (351)
Q Consensus 311 ~~~i~~fl~~~~~~ 324 (351)
.+.|.+||+.....
T Consensus 355 ~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 355 DPVVMEFLEALEEG 368 (388)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999877654
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=191.65 Aligned_cols=258 Identities=17% Similarity=0.161 Sum_probs=154.3
Q ss_pred cccCCeEEEEEEcCC--CCCeEEEEecCCCCcc-ch-------------------------HHHHHHhcCCCCCCCCchh
Q 018750 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHD-AW-------------------------GPQLKGLAGTDKPNDDDET 71 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~--~~p~vv~~HG~~~~~~-~~-------------------------~~~~~~l~~~~~~~~~~~~ 71 (351)
.+.+|.+|++..+.. .+.+||++||++++.. .| ..+++.|.+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~---------- 72 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK---------- 72 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH----------
Confidence 455889999888754 3348999999999885 11 345667766
Q ss_pred hhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC--CccchHhHHHHHHHHHHHhC------------------------
Q 018750 72 ILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLG------------------------ 125 (351)
Q Consensus 72 ~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~~~------------------------ 125 (351)
+||+|+++|+||||.|...... ...+++++++|+.++++.+.
T Consensus 73 ------------~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (332)
T TIGR01607 73 ------------NGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKEN 140 (332)
T ss_pred ------------CCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccC
Confidence 7999999999999999854321 12478999999999987642
Q ss_pred CcceEEEEEchhhHHHHHHHHhCCc--------ccceEEEeccCCCCCCC-CCc-cc-hhhhHHHHhhcccCCHHHHhhc
Q 018750 126 WKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTGGGFQC-CPK-LD-LQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 126 ~~~v~lvG~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
..|++|+||||||.+++.++.++++ .++++|+++|+...... .+. .. ..........+....+......
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 220 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK 220 (332)
T ss_pred CCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC
Confidence 2479999999999999999876542 58999988876321000 000 00 0000001111100000000000
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC-CCcchhhhhhhcccCCHHHHHHhhcc--CccEEEEeecC
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN-YGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRH 271 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~g~~ 271 (351)
...+. ......+. ......... ............ ........+..+ ++|+|+|+|++
T Consensus 221 --~~~~~------------~~~~~~~~----~~~Dp~~~~~~~s~~~~~~l~~--~~~~~~~~~~~i~~~~P~Lii~G~~ 280 (332)
T TIGR01607 221 --KIRYE------------KSPYVNDI----IKFDKFRYDGGITFNLASELIK--ATDTLDCDIDYIPKDIPILFIHSKG 280 (332)
T ss_pred --ccccc------------cChhhhhH----HhcCccccCCcccHHHHHHHHH--HHHHHHhhHhhCCCCCCEEEEEeCC
Confidence 00000 00000000 000000000 000001111000 001112234445 78999999999
Q ss_pred CccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccC-hHHHHHHHHHHHH
Q 018750 272 DVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHER-TEEVNQALIDLIK 319 (351)
Q Consensus 272 D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~-p~~~~~~i~~fl~ 319 (351)
|.+++++.++.+.+.+. ++++++++++ +|.++.|. ++++.+.|.+||+
T Consensus 281 D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 281 DCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 99999999999887653 5788999998 99998884 7899999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=174.98 Aligned_cols=253 Identities=19% Similarity=0.206 Sum_probs=160.6
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
..|+++++||+.|+...|..+...|+.. -+..|+++|.|.||.|.... ..+.+.++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~---------------------l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma 106 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRK---------------------LGRDVYAVDVRNHGSSPKIT---VHNYEAMA 106 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhccc---------------------ccCceEEEecccCCCCcccc---ccCHHHHH
Confidence 4578999999999999999999999884 26699999999999997665 45689999
Q ss_pred HHHHHHHHHhC----CcceEEEEEchhh-HHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 115 KDVIALMDHLG----WKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 115 ~dl~~~l~~~~----~~~v~lvG~S~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
+|+..|++..+ ..+++++|||||| .+++..+...|+.+..+|+++.++............ ..............
T Consensus 107 ~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e-~i~~m~~~d~~~~~ 185 (315)
T KOG2382|consen 107 EDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRE-LIKAMIQLDLSIGV 185 (315)
T ss_pred HHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHH-HHHHHHhccccccc
Confidence 99999999884 4689999999999 788888888999999999999875422111111111 11111111111000
Q ss_pred HHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC--CC-cchhhhhhhcccCCHHHHHHh--hccCccE
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN--YG-FDGQIHACWMHKMTQKDIQTI--RSAGFLV 264 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~l--~~i~~Pv 264 (351)
. .........+.....+....+-....+........ +. -...+...+...........+ ...+.||
T Consensus 186 ----~-----~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pv 256 (315)
T KOG2382|consen 186 ----S-----RGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPV 256 (315)
T ss_pred ----c-----ccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccce
Confidence 0 00011111111111111111111111110000000 00 001111111110001111112 4557899
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 265 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
|++.|.++..++.+...++.+.+ |+++++.++. ||+++.|+|+++.+.|.+|+.+++
T Consensus 257 lfi~g~~S~fv~~~~~~~~~~~f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 257 LFIKGLQSKFVPDEHYPRMEKIF-PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred eEEecCCCCCcChhHHHHHHHhc-cchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 99999999999999888888865 9999999995 999999999999999999998764
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-22 Score=170.16 Aligned_cols=278 Identities=22% Similarity=0.198 Sum_probs=182.3
Q ss_pred ccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHH-------HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP-------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 21 ~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.+++..|.|+++|. ..++||++||+.+++..... +++.+..+++++|+ ..|.||
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt---------------~r~fvI 96 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDT---------------ERFFVI 96 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCc---------------cceEEE
Confidence 34578999999995 34579999999998876653 89999999999999 889999
Q ss_pred EecCCCCC-CCCCCCC-----------CCccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHHHHHhCCcccceEE
Q 018750 90 AFDNRGMG-RSSVPVK-----------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLA 156 (351)
Q Consensus 90 ~~D~~G~G-~S~~~~~-----------~~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~lv 156 (351)
+.|..|.+ .|+.|.. ...++++|+++.-..+++++|++++. +||.||||+.|++++..+|++|+++|
T Consensus 97 c~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i 176 (368)
T COG2021 97 CTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAI 176 (368)
T ss_pred EecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhh
Confidence 99988876 4443321 24578999999889999999999987 88999999999999999999999999
Q ss_pred EeccCCCCCCCCCccchh--hhHHHHhhcccCCHHH-----------------HhhcCccccccHHHHHHhhcCCc----
Q 018750 157 LLNVTGGGFQCCPKLDLQ--TLSIAIRFFRAKTPEK-----------------RAAVDLDTHYSQEYLEEYVGSST---- 213 (351)
Q Consensus 157 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~---- 213 (351)
.+++... .... .+....+......+.. ..........+.+.+.+.++...
T Consensus 177 ~ia~~~r-------~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~ 249 (368)
T COG2021 177 PIATAAR-------LSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADP 249 (368)
T ss_pred eeccccc-------CCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccc
Confidence 9998642 1111 1111111111100000 00000011122233333322211
Q ss_pred ----hhhhhHHHHHhhhhhc--cCCCCCCcchhhhhhhcccC---CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHH
Q 018750 214 ----RRAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLA 284 (351)
Q Consensus 214 ----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~ 284 (351)
......+.+++..... .......|.......-.+.. ..+....++++++|+|++.-+.|.+.|++..+++.
T Consensus 250 ~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~ 329 (368)
T COG2021 250 LRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALA 329 (368)
T ss_pred cCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHH
Confidence 1122333333322211 00111111111111111111 13456778999999999999999999999999999
Q ss_pred HHhCCCceEEEcCC--CccccccChHHHHHHHHHHHHh
Q 018750 285 EKLYPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 285 ~~~~~~~~~~~~~g--gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
+.+.+...+.+++. ||..++...+.+...|.+||+.
T Consensus 330 ~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 330 EALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 98844443888874 9999999999999999999974
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-22 Score=179.06 Aligned_cols=215 Identities=17% Similarity=0.167 Sum_probs=137.1
Q ss_pred CCCeEEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 35 GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
..|+||++||+.+.. +.|..+...|.+ +||+|+++|+||+|.|..... ..+....
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~----------------------~Gy~vl~~D~pG~G~s~~~~~--~~d~~~~ 248 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAP----------------------RGIAMLTIDMPSVGFSSKWKL--TQDSSLL 248 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHh----------------------CCCEEEEECCCCCCCCCCCCc--cccHHHH
Confidence 345666666666553 568888888887 799999999999999965321 2233444
Q ss_pred HHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHH
Q 018750 114 AKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (351)
Q Consensus 114 ~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
..++.+++... +.+++.++||||||.+++.+|..+|++|+++|++++....... .... ... .+..
T Consensus 249 ~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~-----~~~~------~~~-~p~~ 316 (414)
T PRK05077 249 HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT-----DPKR------QQQ-VPEM 316 (414)
T ss_pred HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc-----chhh------hhh-chHH
Confidence 45555555544 4578999999999999999999999999999999876321100 0000 000 0000
Q ss_pred HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh-hccCccEEEEee
Q 018750 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI-RSAGFLVSVIHG 269 (351)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvlii~g 269 (351)
....+...++...... ..+...+.. ........+ .++++|+|+|+|
T Consensus 317 ----------~~~~la~~lg~~~~~~---~~l~~~l~~--------------------~sl~~~~~l~~~i~~PvLiI~G 363 (414)
T PRK05077 317 ----------YLDVLASRLGMHDASD---EALRVELNR--------------------YSLKVQGLLGRRCPTPMLSGYW 363 (414)
T ss_pred ----------HHHHHHHHhCCCCCCh---HHHHHHhhh--------------------ccchhhhhhccCCCCcEEEEec
Confidence 0000111111100000 000010000 000000112 568899999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
++|.++|++.++.+.+.. ++.+++++++. ++++.++++.+.|.+||++.
T Consensus 364 ~~D~ivP~~~a~~l~~~~-~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDSRLIASSS-ADGKLLEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHHHHHHHhC-CCCeEEEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 999999999999888765 89999999985 35679999999999999764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=168.57 Aligned_cols=230 Identities=19% Similarity=0.186 Sum_probs=137.1
Q ss_pred CCeEEEEecCCC----CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 36 PTKVILITGLAG----THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 36 ~p~vv~~HG~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
++.||++||++. +...|..+++.|++ +||+|+++|+||||.|.... .+++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~----------------------~G~~v~~~Dl~G~G~S~~~~----~~~~ 79 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAE----------------------AGFPVLRFDYRGMGDSEGEN----LGFE 79 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHH----------------------CCCEEEEeCCCCCCCCCCCC----CCHH
Confidence 456888888653 23345667788887 69999999999999987432 3567
Q ss_pred hHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC
Q 018750 112 IMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (351)
Q Consensus 112 ~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (351)
++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++....... ......... +...
T Consensus 80 ~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~---~~~~~~~~~--~~~~- 152 (274)
T TIGR03100 80 GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAA---QAASRIRHY--YLGQ- 152 (274)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCccc---chHHHHHHH--HHHH-
Confidence 7788888887776 55679999999999999999865 4689999999975321110 000000000 0000
Q ss_pred CHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEE
Q 018750 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (351)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (351)
. ....++..............+.+...+............ .....+....+..+++|+++
T Consensus 153 ------~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~P~ll 212 (274)
T TIGR03100 153 ------L------LSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAH--------GGLAERMKAGLERFQGPVLF 212 (274)
T ss_pred ------H------hChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCccc--------chHHHHHHHHHHhcCCcEEE
Confidence 0 001111111111111111111111111000000000000 00223344667788999999
Q ss_pred EeecCCccCCHHHH------HHHHHHhC-CCceEEEcCC-Ccccccc-ChHHHHHHHHHHHH
Q 018750 267 IHGRHDVIAQICYA------RRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIK 319 (351)
Q Consensus 267 i~g~~D~~~~~~~~------~~~~~~~~-~~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl~ 319 (351)
++|..|...+ ... .++.+.+. ++++++.+++ +|++..+ .++++.+.|.+||+
T Consensus 213 ~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 213 ILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred EEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 9999999864 222 44444342 7899999997 9998555 55999999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-21 Score=172.24 Aligned_cols=265 Identities=14% Similarity=0.065 Sum_probs=146.5
Q ss_pred cccccCCeEEEEE--EcC---CCCCeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 18 AALNDNGIKIFYR--TYG---RGPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 18 ~~~~~~g~~l~y~--~~g---~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
.+...||..+.+. ... ..+|+||++||++++... +..++..|.+ +||+|++
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~----------------------~G~~v~~ 92 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQK----------------------RGWLGVV 92 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHH----------------------CCCEEEE
Confidence 3444566655432 211 235789999999887543 4567788887 7999999
Q ss_pred ecCCCCCCCCCCCCCCcc---chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc--cceEEEeccCCCCC
Q 018750 91 FDNRGMGRSSVPVKKTEY---TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGF 165 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~---~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~ 165 (351)
+|+||||.+..... ..+ ..+|....+..+.+.++.++++++||||||.+++.++.++++. +.++|+++++....
T Consensus 93 ~d~rG~g~~~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~ 171 (324)
T PRK10985 93 MHFRGCSGEPNRLH-RIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLE 171 (324)
T ss_pred EeCCCCCCCccCCc-ceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHH
Confidence 99999997753321 112 2333333333344445667899999999999988888877644 89999998753110
Q ss_pred CCCCccchhhhHHHH-hhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHH--HHhhhhhccCCCCCCcchhhh
Q 018750 166 QCCPKLDLQTLSIAI-RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQE--YVKGISATGMQSNYGFDGQIH 242 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 242 (351)
. ....+.... ............. ........+.+........... ....+.........++.....
T Consensus 172 ~-----~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~ 240 (324)
T PRK10985 172 A-----CSYRMEQGFSRVYQRYLLNLLKA------NAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAID 240 (324)
T ss_pred H-----HHHHHhhhHHHHHHHHHHHHHHH------HHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHH
Confidence 0 000000000 0000000000000 0000011111100000000000 011111111112223322222
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccCh-----HHHHHHHHH
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT-----EEVNQALID 316 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p-----~~~~~~i~~ 316 (351)
.+.. .+....++++++|+++|+|++|++++++....+.+. .++.+++++++ ||+.+++.. -...+.+.+
T Consensus 241 ~y~~----~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~ 315 (324)
T PRK10985 241 YYRQ----CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESL-PPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPD 315 (324)
T ss_pred HHHH----CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHh-CCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHH
Confidence 2111 123467789999999999999999998888877654 48889899987 999998742 356677888
Q ss_pred HHHhc
Q 018750 317 LIKAS 321 (351)
Q Consensus 317 fl~~~ 321 (351)
|+...
T Consensus 316 ~~~~~ 320 (324)
T PRK10985 316 WLTTY 320 (324)
T ss_pred HHHHh
Confidence 88654
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-23 Score=172.95 Aligned_cols=218 Identities=24% Similarity=0.293 Sum_probs=132.6
Q ss_pred eEEEEecCCCCCCCCC--CCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 86 IEVCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 86 ~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
|+|+++|+||+|.|+. ......++.+++++++..+++.++.++++++||||||.+++.+|.++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 13446889999999999999999999999999999999999999999999999999998520
Q ss_pred CCCCCCccchhhhHHHHhhcccCCHHHHhh--cCccccccHHH------HHHhhcCCchhhhhHHHHHhhhhhccCCCCC
Q 018750 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAA--VDLDTHYSQEY------LEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (351)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (351)
.+.......... ............. ........... .................+...... .
T Consensus 81 ----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 149 (230)
T PF00561_consen 81 ----LPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAET------D 149 (230)
T ss_dssp ----HHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHH------H
T ss_pred ----chhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHH------H
Confidence 000000000000 0000000000000 00000000000 000000000000000000000000 0
Q ss_pred CcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHH
Q 018750 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i 314 (351)
................+....+.++++|+++++|++|.++|++....+.+.+ ++.+++++++ ||+.++++++++++.|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 150 AFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred HHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhh
Confidence 0000000000111223445677889999999999999999999999988865 9999999998 9999999999999987
Q ss_pred H
Q 018750 315 I 315 (351)
Q Consensus 315 ~ 315 (351)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-21 Score=173.07 Aligned_cols=275 Identities=13% Similarity=0.116 Sum_probs=149.9
Q ss_pred CccccccCCeEEEEEEcC---CCCCeEEEEecCCCCccch-----HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 018750 16 PDAALNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g---~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
.....+.++..++..... ..+++||++||+..+...+ ..+++.|.+ +||+
T Consensus 39 ~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~----------------------~G~~ 96 (350)
T TIGR01836 39 KEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE----------------------RGQD 96 (350)
T ss_pred CceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHH----------------------CCCe
Confidence 344455556666554332 1234699999986555443 578888887 7999
Q ss_pred EEEecCCCCCCCCCCCCCCccchHhHHH-----HHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAK-----DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 88 vi~~D~~G~G~S~~~~~~~~~~~~~~~~-----dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
|+++|++|+|.++.. .++++++. .+..+++..+.++++++||||||.+++.++..+|++|+++|+++++.
T Consensus 97 V~~~D~~g~g~s~~~-----~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 97 VYLIDWGYPDRADRY-----LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred EEEEeCCCCCHHHhc-----CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccc
Confidence 999999999987533 35555543 33445555677899999999999999999999999999999999764
Q ss_pred CCCCCCCccchh-----hhHHHHhhcccCCHHHHhh----cCccccccHHHHHHhhcCCchhhhhHHHHHh---hhhhcc
Q 018750 163 GGFQCCPKLDLQ-----TLSIAIRFFRAKTPEKRAA----VDLDTHYSQEYLEEYVGSSTRRAILYQEYVK---GISATG 230 (351)
Q Consensus 163 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 230 (351)
..... +..... ................... ..........+.... .. .........+.+ ......
T Consensus 172 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~w~~d~~ 248 (350)
T TIGR01836 172 DFETP-GNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLV-DI-LEDERKVENFLRMEKWIFDSP 248 (350)
T ss_pred ccCCC-CchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHH-Hh-cCChHHHHHHHHHHHHhcCCc
Confidence 21110 000000 0000000000000000000 000000000000000 00 000001111100 000000
Q ss_pred CCCCCCcchhhhhhhccc-CC------HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCCCccc
Q 018750 231 MQSNYGFDGQIHACWMHK-MT------QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPGGHLV 302 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~-~~------~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~ggH~~ 302 (351)
......+...+...+... .. .+....++++++|+++++|++|.++|++.++.+.+.+.. +.+++++++||..
T Consensus 249 ~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 328 (350)
T TIGR01836 249 DQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIG 328 (350)
T ss_pred CccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEE
Confidence 000000000000000000 00 001123668899999999999999999999999987632 4677888889988
Q ss_pred cccC---hHHHHHHHHHHHHh
Q 018750 303 SHER---TEEVNQALIDLIKA 320 (351)
Q Consensus 303 ~~~~---p~~~~~~i~~fl~~ 320 (351)
.+.. ++++.+.|.+||.+
T Consensus 329 ~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 329 IYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred EEECchhHhhhhHHHHHHHHh
Confidence 7664 48899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=174.65 Aligned_cols=280 Identities=16% Similarity=0.154 Sum_probs=160.3
Q ss_pred cccccCCeEEEEEEcC--------CCCCeEEEEecCCCCccchH------HHHHHhcCCCCCCCCchhhhcccccCCCCC
Q 018750 18 AALNDNGIKIFYRTYG--------RGPTKVILITGLAGTHDAWG------PQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g--------~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (351)
.+.+.||..|...... .++|+||++||+++++..|. .+...|++
T Consensus 48 ~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~---------------------- 105 (395)
T PLN02872 48 TIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD---------------------- 105 (395)
T ss_pred EEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh----------------------
Confidence 3456688888876642 12467999999999888874 23344555
Q ss_pred CCeEEEEecCCCCCCCCC-------CCCCCccchHhHH-HHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCc--
Q 018750 84 AGIEVCAFDNRGMGRSSV-------PVKKTEYTTKIMA-KDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE-- 150 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~-~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~-- 150 (351)
+||+|+++|+||++.|.. ......+++++++ .|+.++++.+ ..++++++||||||.+++.++ .+|+
T Consensus 106 ~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 106 HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 799999999999886532 1111257888888 7999999986 337899999999999998555 5676
Q ss_pred -ccceEEEeccCCCCCCCCCccchhh----hHHHHhhcc-----cCCHHHHh--h-cCccccccHHHHHHhhcCC-----
Q 018750 151 -RVLSLALLNVTGGGFQCCPKLDLQT----LSIAIRFFR-----AKTPEKRA--A-VDLDTHYSQEYLEEYVGSS----- 212 (351)
Q Consensus 151 -~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~----- 212 (351)
+|+.+++++|..........+.... .......+. ........ . .-.........+....+..
T Consensus 185 ~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~ 264 (395)
T PLN02872 185 EMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNA 264 (395)
T ss_pred HHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccch
Confidence 6888899888753211111110000 000000000 00000000 0 0000000000011111100
Q ss_pred ------------chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhcc--CccEEEEeecCCccCCHH
Q 018750 213 ------------TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRHDVIAQIC 278 (351)
Q Consensus 213 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~g~~D~~~~~~ 278 (351)
.........|.+ +...+....+++....+........ ...-.++++ ++|+++++|++|.+++++
T Consensus 265 ~~~~~~~~~~pagtS~k~~~H~~Q-~~~s~~f~~yDyg~~~n~~~Yg~~~-pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~ 342 (395)
T PLN02872 265 SRIDYYLEYEPHPSSVKNLRHLFQ-MIRKGTFAHYDYGIFKNLKLYGQVN-PPAFDLSLIPKSLPLWMGYGGTDGLADVT 342 (395)
T ss_pred hhhhHHHhcCCCcchHHHHHHHHH-HHhcCCcccCCCCchhhHHHhCCCC-CCCcCcccCCCCccEEEEEcCCCCCCCHH
Confidence 000001111111 1222333334443222221111111 112235666 589999999999999999
Q ss_pred HHHHHHHHhCCCceEEEcCC-Cccc---cccChHHHHHHHHHHHHhcC
Q 018750 279 YARRLAEKLYPVARMIDLPG-GHLV---SHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~g-gH~~---~~~~p~~~~~~i~~fl~~~~ 322 (351)
.++++.+.+....+++.+++ ||.. ..+.++++.+.|.+||++..
T Consensus 343 dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 343 DVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 99999998844368888998 9963 44889999999999998643
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=162.18 Aligned_cols=218 Identities=19% Similarity=0.250 Sum_probs=135.2
Q ss_pred cCCeEEEEEEcCC------CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 22 DNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 22 ~~g~~l~y~~~g~------~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+|..|+-+..-+ +.++||++||++++...+..+++.|.+ +||.|+.+|.||
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~----------------------~G~~vLrfD~rg 74 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSS----------------------NGFHVIRYDSLH 74 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHH----------------------CCCEEEEecCCC
Confidence 3688887655433 236799999999988778999999998 799999999998
Q ss_pred C-CCCCCCCCCCccchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 96 M-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 96 ~-G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
+ |.|+.... ..+......|+.++++.+ +.+++.|+||||||.+|+..|... .++++|+.+|... +
T Consensus 75 ~~GeS~G~~~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~-------l 143 (307)
T PRK13604 75 HVGLSSGTID--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN-------L 143 (307)
T ss_pred CCCCCCCccc--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc-------H
Confidence 8 99976442 334344467776655554 456899999999999997777643 4999999998631 1
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
. ..+...........+ .... ...+ .+.+.... ...+.+..... .+. ...
T Consensus 144 ~-d~l~~~~~~~~~~~p----~~~l-----p~~~-d~~g~~l~----~~~f~~~~~~~--------------~~~--~~~ 192 (307)
T PRK13604 144 R-DTLERALGYDYLSLP----IDEL-----PEDL-DFEGHNLG----SEVFVTDCFKH--------------GWD--TLD 192 (307)
T ss_pred H-HHHHHhhhcccccCc----cccc-----cccc-cccccccc----HHHHHHHHHhc--------------Ccc--ccc
Confidence 1 111100000000000 0000 0000 00000000 00111100000 000 011
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-Ccccc
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVS 303 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~ 303 (351)
...+.++++++|+|+|||++|.+||.+.++.+.+.+. .+++++.++| +|.+.
T Consensus 193 s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 193 STINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred cHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 2234566778999999999999999999999999873 4799999999 89774
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-20 Score=160.40 Aligned_cols=213 Identities=16% Similarity=0.122 Sum_probs=128.1
Q ss_pred EEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 27 l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
++|...+. ..|+||++||++++...|..+...|.+ +||+|+++|+||||.+....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~G~~~~~~ 72 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQ----------------------AGFRVIMPDAPMHGARFSGD 72 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHh----------------------CCCEEEEecCCcccccCCCc
Confidence 55555442 347899999999998889999999987 79999999999999864321
Q ss_pred CCCcc-----chHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 104 KKTEY-----TTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 104 ~~~~~-----~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
..... ...+..+|+.++++.+ +.++++++||||||.+++.++.++|+....++++.+.. ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~--------~~ 144 (249)
T PRK10566 73 EARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY--------FT 144 (249)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH--------HH
Confidence 10111 0112234444444332 34689999999999999999998886333333333210 00
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
. ....... . .. . .... .......+...+ ...+
T Consensus 145 --~---~~~~~~~--~----------~~----~----~~~~-~~~~~~~~~~~~----------------------~~~~ 176 (249)
T PRK10566 145 --S---LARTLFP--P----------LI----P----ETAA-QQAEFNNIVAPL----------------------AEWE 176 (249)
T ss_pred --H---HHHHhcc--c----------cc----c----cccc-cHHHHHHHHHHH----------------------hhcC
Confidence 0 0000000 0 00 0 0000 000000000000 0001
Q ss_pred HHHHhhcc-CccEEEEeecCCccCCHHHHHHHHHHhCC-----CceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 253 DIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 253 ~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
....+.++ ++|+|+++|++|.++|++.++.+.+.+.. +.++.++++ ||... .+..+.+.+||++.
T Consensus 177 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 177 VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 12334555 68999999999999999999999987732 256778898 99763 35678889998753
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=171.71 Aligned_cols=254 Identities=15% Similarity=0.087 Sum_probs=146.9
Q ss_pred ccccCCeEE-EEEEcCC--CCCeEEEEecCCCCccchH-----HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 19 ALNDNGIKI-FYRTYGR--GPTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 19 ~~~~~g~~l-~y~~~g~--~~p~vv~~HG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
+...+-.++ +|....+ .+++||++||+......|+ .++..|.+ +||+|++
T Consensus 168 V~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~----------------------qGf~V~~ 225 (532)
T TIGR01838 168 VFENELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE----------------------QGHTVFV 225 (532)
T ss_pred EEECCcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHH----------------------CCcEEEE
Confidence 333444444 4433322 3456999999988887775 68888887 7999999
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHH----HHHHhC-CcccceEEEeccCCCCC
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC----KLAAMV-PERVLSLALLNVTGGGF 165 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~ 165 (351)
+|++|+|.+.......+|..+.+.+.+..+++.++.++++++||||||.++. .++... +++|++++++++.....
T Consensus 226 iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 226 ISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred EECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 9999999987654334555566777788888888989999999999999852 245555 78899999999864321
Q ss_pred CCCCccc----hhhhHHHHhhcc---cCCHHHHhh----cCccccccHHHHHHhhcCCc---------------hhhhhH
Q 018750 166 QCCPKLD----LQTLSIAIRFFR---AKTPEKRAA----VDLDTHYSQEYLEEYVGSST---------------RRAILY 219 (351)
Q Consensus 166 ~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 219 (351)
. ...+. ........+... ......... ..........++..++.... ......
T Consensus 306 ~-~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~ 384 (532)
T TIGR01838 306 D-PGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMH 384 (532)
T ss_pred C-cchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHH
Confidence 1 10000 000100000000 000000000 00000000111111111111 111112
Q ss_pred HHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-
Q 018750 220 QEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG- 298 (351)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g- 298 (351)
.++++.+-..+....- .....+....+.+|++|+++|.|++|.++|++.++.+.+.+ ++.+..++++
T Consensus 385 ~~~lr~ly~~N~L~~G-----------~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i-~~~~~~vL~~s 452 (532)
T TIGR01838 385 NFYLRNLYLQNALTTG-----------GLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL-GGPKTFVLGES 452 (532)
T ss_pred HHHHHHHHhcCCCcCC-----------eeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC-CCCEEEEECCC
Confidence 2222211111100000 00011223567889999999999999999999999998876 6778888886
Q ss_pred CccccccCh
Q 018750 299 GHLVSHERT 307 (351)
Q Consensus 299 gH~~~~~~p 307 (351)
||..++++|
T Consensus 453 GHi~~ienP 461 (532)
T TIGR01838 453 GHIAGVVNP 461 (532)
T ss_pred CCchHhhCC
Confidence 999988765
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=151.69 Aligned_cols=185 Identities=13% Similarity=0.118 Sum_probs=122.6
Q ss_pred CeEEEEecCCCCccchHH--HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 37 TKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
|+||++||++++...|.. +.+.+.+.. .+|+|+++|+||++ ++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~--------------------~~~~v~~~dl~g~~-------------~~~~ 48 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH--------------------PDIEMIVPQLPPYP-------------ADAA 48 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC--------------------CCCeEEeCCCCCCH-------------HHHH
Confidence 579999999999998874 334454310 27999999999884 3578
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhc
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
+++.++++.++.++++++||||||.+++.+|.++|. ++|+++|+.. ... ....+..... .. ..
T Consensus 49 ~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~--------~~~---~~~~~~~~~~-~~--~~ 111 (190)
T PRK11071 49 ELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR--------PFE---LLTDYLGENE-NP--YT 111 (190)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC--------HHH---HHHHhcCCcc-cc--cC
Confidence 889999999998999999999999999999999983 4688887521 001 1111110000 00 00
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCcc
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 274 (351)
.....+. +.+...... . + ...+. .++|+++|+|++|.+
T Consensus 112 ~~~~~~~------------------~~~~~d~~~--------------------~--~-~~~i~-~~~~v~iihg~~De~ 149 (190)
T PRK11071 112 GQQYVLE------------------SRHIYDLKV--------------------M--Q-IDPLE-SPDLIWLLQQTGDEV 149 (190)
T ss_pred CCcEEEc------------------HHHHHHHHh--------------------c--C-CccCC-ChhhEEEEEeCCCCc
Confidence 0000000 011110000 0 0 01122 567899999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
+|.+.+.++.+. ++.++++| +|.. +..+++.+.|.+|++
T Consensus 150 V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 150 LDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999999999884 36667788 8976 555899999999975
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-19 Score=152.31 Aligned_cols=267 Identities=26% Similarity=0.374 Sum_probs=154.8
Q ss_pred cccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC
Q 018750 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 99 (351)
....+..+.|...+.+.|+++++||++++...|......+... ... |+++++|+||||.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~-------------------~~~-~~~~~~d~~g~g~s 64 (282)
T COG0596 5 LAADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPAL-------------------AAR-YRVIAPDLRGHGRS 64 (282)
T ss_pred ccCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhcc-------------------ccc-eEEEEecccCCCCC
Confidence 3445677888887765668999999999999888744444430 002 99999999999999
Q ss_pred CCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc----cchhh
Q 018750 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK----LDLQT 175 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~ 175 (351)
. .. .++...+++++..+++.++..+++++||||||.+++.++.++|++++++|++++.......... .....
T Consensus 65 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 140 (282)
T COG0596 65 D-PA---GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAP 140 (282)
T ss_pred C-cc---cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccc
Confidence 7 11 3345555999999999999888999999999999999999999999999999976431100000 00000
Q ss_pred hHHHHhhcccC-CHHHHhhcCccccccHHHHHH--hhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 176 LSIAIRFFRAK-TPEKRAAVDLDTHYSQEYLEE--YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
........... ............ ........ ........................ ......... .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~ 212 (282)
T COG0596 141 LAALADLLLGLDAAAFAALLAALG-LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR---ADLAAALLA----LLDRD 212 (282)
T ss_pred hhhhhhhhhccchhhhhhhhhccc-ccccccccchhccccccccccchhHhhhhhhhcc---cccchhhhc----ccccc
Confidence 00000000000 000000000000 00000000 000000000000000000000000 000000000 00002
Q ss_pred HHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC-ceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
.......+++|+++++|++|.+.|......+.+.+ ++ .+++++++ ||+++.++|+.+.+.+.+|+.
T Consensus 213 ~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 213 LRAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 23456777899999999999777766656666654 64 88999998 999999999999999988553
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=151.65 Aligned_cols=245 Identities=19% Similarity=0.241 Sum_probs=142.7
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
..|.++++||.+.+...|..+..+|... ...+|+++|+||||.+...+. .+.+.+.++
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~---------------------~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~ 130 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSK---------------------IRCRCLALDLRGHGETKVENE-DDLSLETMS 130 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhh---------------------cceeEEEeeccccCccccCCh-hhcCHHHHH
Confidence 4578999999999999999999999872 356789999999999987665 578999999
Q ss_pred HHHHHHHHHh-C--CcceEEEEEchhhHHHHHHHHh--CCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 115 KDVIALMDHL-G--WKQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 115 ~dl~~~l~~~-~--~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
+|+.++++.+ | ..+++||||||||.+|...|.. .|. +.++++++.. .......+..+..++......
T Consensus 131 KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV-------EgtAmeAL~~m~~fL~~rP~~ 202 (343)
T KOG2564|consen 131 KDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV-------EGTAMEALNSMQHFLRNRPKS 202 (343)
T ss_pred HHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe-------chHHHHHHHHHHHHHhcCCcc
Confidence 9999999887 2 3579999999999999887654 465 8999999875 222222222222222221111
Q ss_pred HHhhcCccccccHHHHHHhhcCCch--hhhhHHHHHhhhhhccCCCCCCcc---hhhhhhhcccCCHHHHHHhhccCccE
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFD---GQIHACWMHKMTQKDIQTIRSAGFLV 264 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (351)
...... ..++.-+....... .....-........ + ..+.+. .....+|...+. +....+-...+|-
T Consensus 203 F~Si~~-----Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~e-G--h~yvwrtdL~kte~YW~gWF~-gLS~~Fl~~p~~k 273 (343)
T KOG2564|consen 203 FKSIED-----AIEWHVRSGQLRNRDSARVSMPSQLKQCEE-G--HCYVWRTDLEKTEQYWKGWFK-GLSDKFLGLPVPK 273 (343)
T ss_pred ccchhh-----HHHHHhccccccccccceEecchheeeccC-C--CcEEEEeeccccchhHHHHHh-hhhhHhhCCCccc
Confidence 000000 00000000000000 00000000000000 0 000000 001111111111 1112223456777
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 265 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
++|.+..|..-..-.. -++....++.+++. ||+.+.+.|..++..+..|+.+..
T Consensus 274 lLilAg~d~LDkdLti----GQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 274 LLILAGVDRLDKDLTI----GQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred eeEEecccccCcceee----eeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 8887777765331111 11234568889987 999999999999999999998764
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.1e-20 Score=141.61 Aligned_cols=144 Identities=31% Similarity=0.410 Sum_probs=114.0
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (351)
+||++||++++...|..+...|++ +||.|+.+|+||+|.+... ...+++.+++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~ 53 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE----------------------QGYAVVAFDYPGHGDSDGA-----DAVERVLADI 53 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH----------------------TTEEEEEESCTTSTTSHHS-----HHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEecCCCCccchh-----HHHHHHHHHH
Confidence 589999999999999999999998 7999999999999988321 1333333333
Q ss_pred HHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCcc
Q 018750 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD 197 (351)
Q Consensus 118 ~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (351)
. .+..+.+++.++|||+||.+++.++.+. .+++++|++++.. .
T Consensus 54 ~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~-------~--------------------------- 96 (145)
T PF12695_consen 54 R--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP-------D--------------------------- 96 (145)
T ss_dssp H--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS-------G---------------------------
T ss_pred H--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc-------c---------------------------
Confidence 2 1122667999999999999999999988 6899999998620 0
Q ss_pred ccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCH
Q 018750 198 THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (351)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~ 277 (351)
.+.+...++|+++++|++|.++++
T Consensus 97 --------------------------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~ 120 (145)
T PF12695_consen 97 --------------------------------------------------------SEDLAKIRIPVLFIHGENDPLVPP 120 (145)
T ss_dssp --------------------------------------------------------CHHHTTTTSEEEEEEETT-SSSHH
T ss_pred --------------------------------------------------------hhhhhccCCcEEEEEECCCCcCCH
Confidence 023445667999999999999999
Q ss_pred HHHHHHHHHhCCCceEEEcCC-Ccc
Q 018750 278 CYARRLAEKLYPVARMIDLPG-GHL 301 (351)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~g-gH~ 301 (351)
+..+.+.+.+..+.+++++++ +|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 121 EQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 999999998866789999998 895
|
... |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=173.69 Aligned_cols=260 Identities=15% Similarity=0.146 Sum_probs=143.9
Q ss_pred CCeEEEEecCCCCccchHHH-----HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 36 PTKVILITGLAGTHDAWGPQ-----LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
.++|||+||++.+...|+.. ++.|.+ +||+|+++|+ |.++.+......++
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~----------------------~g~~v~~~d~---G~~~~~~~~~~~~l 121 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHR----------------------AGLDPWVIDF---GSPDKVEGGMERNL 121 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHH----------------------CCCEEEEEcC---CCCChhHcCccCCH
Confidence 36799999999999999865 777876 6999999995 66655433223567
Q ss_pred HhHHHHHHHHHHH---hCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCC-ccchhhhH--------
Q 018750 111 KIMAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCP-KLDLQTLS-------- 177 (351)
Q Consensus 111 ~~~~~dl~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~-------- 177 (351)
.+++..+.+.++. +..++++++||||||.+++.++..+ +++|+++|+++++.......+ .+......
T Consensus 122 ~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 201 (994)
T PRK07868 122 ADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMAD 201 (994)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchh
Confidence 7777666666654 3346899999999999999998755 568999999887642111100 00000000
Q ss_pred HHHhhcccCCHHHHh--hcCccccccH----HHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc-C
Q 018750 178 IAIRFFRAKTPEKRA--AVDLDTHYSQ----EYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK-M 249 (351)
Q Consensus 178 ~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (351)
...... ........ .......... .++........ ........+.....-. ......+...+..++... .
T Consensus 202 ~~~~~~-~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~-~~~g~~~~~~~~~~~~~n~~ 279 (994)
T PRK07868 202 HVFNRL-DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI-AWSGPAISELLKQFIAHNRM 279 (994)
T ss_pred hhhhcC-CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc-ccchHHHHHHHHHHHHhCcc
Confidence 000000 00000000 0000000000 00111110000 0000000111000000 000000011111111000 0
Q ss_pred ------CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceE-EEcCC-Ccccccc---ChHHHHHHHHHHH
Q 018750 250 ------TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARM-IDLPG-GHLVSHE---RTEEVNQALIDLI 318 (351)
Q Consensus 250 ------~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~g-gH~~~~~---~p~~~~~~i~~fl 318 (351)
.......++++++|+|+|+|++|.++|++..+.+.+.+ +++++ .++++ ||+.++- .++++...|.+||
T Consensus 280 ~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl 358 (994)
T PRK07868 280 MTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWV 358 (994)
T ss_pred cCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHH
Confidence 00111347889999999999999999999999999876 88876 45565 9987653 6789999999999
Q ss_pred HhcCC
Q 018750 319 KASEK 323 (351)
Q Consensus 319 ~~~~~ 323 (351)
++...
T Consensus 359 ~~~~~ 363 (994)
T PRK07868 359 KWLEG 363 (994)
T ss_pred HHhcc
Confidence 98654
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.9e-19 Score=140.78 Aligned_cols=223 Identities=15% Similarity=0.119 Sum_probs=149.1
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
++.++++|-.|+++..|..+...|.. ...++++++||+|.--... ...+++++++
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-----------------------~iel~avqlPGR~~r~~ep--~~~di~~Lad 61 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-----------------------DIELLAVQLPGRGDRFGEP--LLTDIESLAD 61 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-----------------------hhheeeecCCCcccccCCc--ccccHHHHHH
Confidence 34699999999999999999998886 7999999999999875444 3568999999
Q ss_pred HHHHHHH-HhCCcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 116 DVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 116 dl~~~l~-~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
.+...+. ....+++.++||||||++|.++|.+.. -.+..+.+.++..+.......+....-..+...
T Consensus 62 ~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~--------- 132 (244)
T COG3208 62 ELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLAD--------- 132 (244)
T ss_pred HHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHH---------
Confidence 9998887 455579999999999999999998752 226667776665442222111111111111111
Q ss_pred hhcCccccccHHHHHHhhcCCc---hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 192 AAVDLDTHYSQEYLEEYVGSST---RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
+....+... .+.+..+-+.-.+... .. +...+. . ..-..+.||+.++.
T Consensus 133 -------------l~~lgG~p~e~led~El~~l~LPilRAD-~~--------~~e~Y~--~-----~~~~pl~~pi~~~~ 183 (244)
T COG3208 133 -------------LVDLGGTPPELLEDPELMALFLPILRAD-FR--------ALESYR--Y-----PPPAPLACPIHAFG 183 (244)
T ss_pred -------------HHHhCCCChHHhcCHHHHHHHHHHHHHH-HH--------Hhcccc--c-----CCCCCcCcceEEec
Confidence 111111110 0111111111110000 00 000000 0 01146789999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
|++|..+..+....|.+......++.+++|||+...++.+++.+.|.+.+...
T Consensus 184 G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 184 GEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred cCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhhh
Confidence 99999999999999999876789999999999999999999999999999643
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=139.56 Aligned_cols=193 Identities=21% Similarity=0.224 Sum_probs=132.9
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.+++++.||..........+...|... -+++|+.+|++|+|.|.+... .....+.++
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~---------------------ln~nv~~~DYSGyG~S~G~ps--E~n~y~Di~ 116 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIF---------------------LNCNVVSYDYSGYGRSSGKPS--ERNLYADIK 116 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhc---------------------ccceEEEEecccccccCCCcc--cccchhhHH
Confidence 478999999966655555555556542 278999999999999987664 222222233
Q ss_pred HHHHHHH-HhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhh
Q 018750 116 DVIALMD-HLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (351)
Q Consensus 116 dl~~~l~-~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (351)
.+.+.++ ..| .++++|+|+|+|...++.+|.+.| ++++|+.+|...+. +.+...
T Consensus 117 avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~---------------rv~~~~------- 172 (258)
T KOG1552|consen 117 AVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGM---------------RVAFPD------- 172 (258)
T ss_pred HHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhh---------------hhhccC-------
Confidence 3333333 333 578999999999999999999998 99999999863110 000000
Q ss_pred cCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCc
Q 018750 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (351)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 273 (351)
.. .. . |. ......+.++.++||||++||++|.
T Consensus 173 ------------------~~-~~----~-----------------------~~--d~f~~i~kI~~i~~PVLiiHgtdDe 204 (258)
T KOG1552|consen 173 ------------------TK-TT----Y-----------------------CF--DAFPNIEKISKITCPVLIIHGTDDE 204 (258)
T ss_pred ------------------cc-eE----E-----------------------ee--ccccccCcceeccCCEEEEecccCc
Confidence 00 00 0 00 0001135678899999999999999
Q ss_pred cCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 274 IAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
+++.....++++......+-.++.| ||.-. +...++.+.+.+|+......
T Consensus 205 vv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 205 VVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred eecccccHHHHHhccccCCCcEEecCCCccc-ccCHHHHHHHHHHHHHhccc
Confidence 9999999999998744557778887 99864 45558888899999876543
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=134.28 Aligned_cols=217 Identities=18% Similarity=0.203 Sum_probs=144.5
Q ss_pred ccccCCeEEEEE-Ec-CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 19 ALNDNGIKIFYR-TY-GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 19 ~~~~~g~~l~y~-~~-g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
..+-|.++++-+ .. .++.|+++++||..|+-...-+.+.-+-.. -+.+|+.+++||+
T Consensus 59 l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~---------------------l~mnv~ivsYRGY 117 (300)
T KOG4391|consen 59 LRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVN---------------------LKMNVLIVSYRGY 117 (300)
T ss_pred EEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHH---------------------cCceEEEEEeecc
Confidence 455566776533 22 247789999999999888776666655432 3789999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
|.|++.+.. +.+.-|-.++++.+ ...++++.|-|.||.+|+.+|.+..+++.++|+-+... .
T Consensus 118 G~S~GspsE-----~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~-------S 185 (300)
T KOG4391|consen 118 GKSEGSPSE-----EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFL-------S 185 (300)
T ss_pred ccCCCCccc-----cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhc-------c
Confidence 999977642 33334444555554 33579999999999999999999999999999988642 1
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
++..... ....+...++..+. .+ ..
T Consensus 186 Ip~~~i~------------------~v~p~~~k~i~~lc---------~k----------------------------n~ 210 (300)
T KOG4391|consen 186 IPHMAIP------------------LVFPFPMKYIPLLC---------YK----------------------------NK 210 (300)
T ss_pred chhhhhh------------------eeccchhhHHHHHH---------HH----------------------------hh
Confidence 1100000 00000001111110 00 00
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
......+..-+.|.|+|.|.+|.++||-..+.+.+... ...++..+|+ .|.-..- .+-..++|.+||.+....
T Consensus 211 ~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 211 WLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred hcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 01113344567899999999999999999999999752 2578899997 7865432 356788999999987653
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-16 Score=130.65 Aligned_cols=110 Identities=30% Similarity=0.404 Sum_probs=97.2
Q ss_pred EEEEcC-CCCC--eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC
Q 018750 28 FYRTYG-RGPT--KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (351)
Q Consensus 28 ~y~~~g-~~~p--~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (351)
-|.+.. +|.| +||-+||.+|++..|..+.+.|.+ .|+|+|.+++||+|.+..+..
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~----------------------~~iR~I~iN~PGf~~t~~~~~ 81 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDE----------------------AGIRFIGINYPGFGFTPGYPD 81 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHH----------------------cCeEEEEeCCCCCCCCCCCcc
Confidence 455543 3544 799999999999999999999998 799999999999999998776
Q ss_pred CCccchHhHHHHHHHHHHHhCCc-ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 105 KTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~~~~-~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
..++-.+...-+.++++.++++ +++++|||.||-.|+.+|..+| +.++++++|++
T Consensus 82 -~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 82 -QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred -cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc
Confidence 6888899999999999999885 6889999999999999999996 67999999975
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=136.83 Aligned_cols=174 Identities=16% Similarity=0.126 Sum_probs=114.4
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC---------
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK--------- 104 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~--------- 104 (351)
+..|+||++||++++...|.++.+.|.. .++.+..++.+|...+.....
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~----------------------~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~ 71 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAP----------------------AFPDALVVSVGGPEPSGNGAGRQWFSVQGI 71 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHH----------------------HCCCCEEECCCCCCCcCCCCCcccccCCCC
Confidence 4557899999999999999999999976 344455555555432211000
Q ss_pred CCcc---chHhHHHHHHHHHH----HhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 105 KTEY---TTKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 105 ~~~~---~~~~~~~dl~~~l~----~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
.... ++.+..+.+.++++ ..+. ++++++|+|+||.+++.++..+|+.+.+++.+++... ...
T Consensus 72 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~------~~~--- 142 (232)
T PRK11460 72 TEDNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA------SLP--- 142 (232)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc------ccc---
Confidence 0001 12222333333333 3343 5799999999999999999999987887877764210 000
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
T Consensus 143 -------------------------------------------------------------------------------- 142 (232)
T PRK11460 143 -------------------------------------------------------------------------------- 142 (232)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
.....+.|++++||++|.++|.+.++++.+.+. .+++++++++ ||.+..+..+.+.+.+.++|
T Consensus 143 ~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 143 ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 000124699999999999999999998888763 2467888898 99986555555555555554
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=133.70 Aligned_cols=249 Identities=15% Similarity=0.164 Sum_probs=135.0
Q ss_pred CCCeEEEEecCCCCcc-ch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTHD-AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
..|.||++||+.|++. .| ..+...+.+ +||.|+++++|||+.+..... ..|+ .-
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~----------------------rg~~~Vv~~~Rgcs~~~n~~p-~~yh-~G 129 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSR----------------------RGWLVVVFHFRGCSGEANTSP-RLYH-SG 129 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHh----------------------cCCeEEEEecccccCCcccCc-ceec-cc
Confidence 4578999999987664 33 455666666 799999999999999875433 2222 22
Q ss_pred HHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCc--ccceEEEeccCCCCCCCCCccchhhh-HHHHhhccc
Q 018750 113 MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPKLDLQTL-SIAIRFFRA 185 (351)
Q Consensus 113 ~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 185 (351)
..+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+..-..+.+.++.... ....+.+..
T Consensus 130 ~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~ 209 (345)
T COG0429 130 ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLR 209 (345)
T ss_pred chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence 225555555544 45789999999999554444444322 35555555543110000011110000 000000000
Q ss_pred CCHHHHhhcCccccccHHHHHHhhcCCchh-hhhHHHH--HhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCc
Q 018750 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AILYQEY--VKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (351)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (351)
... ......+..+....... ....+.+ ...+...-.....++.+....+ ........+.+|.+
T Consensus 210 ~L~----------~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYY----r~aSs~~~L~~Ir~ 275 (345)
T COG0429 210 NLK----------RNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYY----RQASSLPLLPKIRK 275 (345)
T ss_pred HHH----------HHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHH----Hhcccccccccccc
Confidence 000 00000011110000000 1111111 1112222223333443333222 11233467889999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcC-CCcccccc----ChH-HHHHHHHHHHHhc
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHE----RTE-EVNQALIDLIKAS 321 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~----~p~-~~~~~i~~fl~~~ 321 (351)
|+|||++.+|++++++..........|+..+..-+ |||..++. ++. ...+.|.+||+..
T Consensus 276 PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 276 PTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 99999999999999988877777556888888887 59998887 343 5567788888754
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-17 Score=137.38 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=84.3
Q ss_pred CCeEEEEecCCCCc----cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 36 PTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 36 ~p~vv~~HG~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
.|+|||+||+++.. ..|..+.+.|++ +||+|+++|+||||.|..... ..+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~----------------------~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~ 80 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAA----------------------GGFGVLQIDLYGCGDSAGDFA--AARWD 80 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCCccc--cCCHH
Confidence 46799999998643 345667788876 699999999999999976542 34677
Q ss_pred hHHHHHHHHHH---HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 112 IMAKDVIALMD---HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 112 ~~~~dl~~~l~---~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
++++|+.++++ ..+.++++|+||||||.+++.++.++|++++++|+++|..
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 88888776554 4466799999999999999999999999999999999763
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.4e-16 Score=133.14 Aligned_cols=116 Identities=22% Similarity=0.324 Sum_probs=78.8
Q ss_pred CeEEEEEEc------CCCCCeEEEEecCCCCccchHHH---HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 24 GIKIFYRTY------GRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 24 g~~l~y~~~------g~~~p~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
|..+.|..+ +.+-|+|+++||++++...|... ...+.. .|+.|+.+|..
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~Vv~pd~~ 86 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA----------------------RGIALVAPDTS 86 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh----------------------cCeEEEecCCC
Confidence 455555544 33568999999999888766432 233343 69999999988
Q ss_pred CCCC-----CCC-----CC--------C------CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc
Q 018750 95 GMGR-----SSV-----PV--------K------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 95 G~G~-----S~~-----~~--------~------~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
++|. +.. .. . ...+-.+++.+.+....+.++.++++++||||||..|+.++.++|+
T Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~ 166 (283)
T PLN02442 87 PRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD 166 (283)
T ss_pred CCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch
Confidence 7662 110 00 0 0011123344444444455577889999999999999999999999
Q ss_pred ccceEEEeccC
Q 018750 151 RVLSLALLNVT 161 (351)
Q Consensus 151 ~v~~lvl~~~~ 161 (351)
++++++.+++.
T Consensus 167 ~~~~~~~~~~~ 177 (283)
T PLN02442 167 KYKSVSAFAPI 177 (283)
T ss_pred hEEEEEEECCc
Confidence 99999999876
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=121.93 Aligned_cols=216 Identities=18% Similarity=0.264 Sum_probs=133.7
Q ss_pred CeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 37 TKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 37 p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
..+|++||+-++.. ....++..|.+ .|+.++.+|++|.|.|+..-....| ...+
T Consensus 34 e~vvlcHGfrS~Kn~~~~~~vA~~~e~----------------------~gis~fRfDF~GnGeS~gsf~~Gn~--~~ea 89 (269)
T KOG4667|consen 34 EIVVLCHGFRSHKNAIIMKNVAKALEK----------------------EGISAFRFDFSGNGESEGSFYYGNY--NTEA 89 (269)
T ss_pred eEEEEeeccccccchHHHHHHHHHHHh----------------------cCceEEEEEecCCCCcCCccccCcc--cchH
Confidence 37999999988765 34556677777 7999999999999999876543333 4456
Q ss_pred HHHHHHHHHhCCc-c--eEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 115 KDVIALMDHLGWK-Q--AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 115 ~dl~~~l~~~~~~-~--v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
+|+..++.++... . -+++|||-||.+++.+|.++.+ ++-+|.+++-... ..... .+ +....
T Consensus 90 dDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl--------~~~I~--eR-lg~~~---- 153 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL--------KNGIN--ER-LGEDY---- 153 (269)
T ss_pred HHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccch--------hcchh--hh-hcccH----
Confidence 9999999988532 2 3578999999999999999987 7778877754210 00000 00 00000
Q ss_pred hhcCccccccHHHHHH--hhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhh--ccCccEEEE
Q 018750 192 AAVDLDTHYSQEYLEE--YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR--SAGFLVSVI 267 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvlii 267 (351)
.+++.+ ++....+ ...+.+ ..........+..+..+... ..+||||-+
T Consensus 154 ----------l~~ike~Gfid~~~r-----------------kG~y~~-rvt~eSlmdrLntd~h~aclkId~~C~VLTv 205 (269)
T KOG4667|consen 154 ----------LERIKEQGFIDVGPR-----------------KGKYGY-RVTEESLMDRLNTDIHEACLKIDKQCRVLTV 205 (269)
T ss_pred ----------HHHHHhCCceecCcc-----------------cCCcCc-eecHHHHHHHHhchhhhhhcCcCccCceEEE
Confidence 000000 0000000 000000 00000000111122222222 247999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 268 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
||..|.++|.+.+.++++.+ ++.++.+++| .|... .+..+.......|.+...
T Consensus 206 hGs~D~IVPve~AkefAk~i-~nH~L~iIEgADHnyt-~~q~~l~~lgl~f~k~r~ 259 (269)
T KOG4667|consen 206 HGSEDEIVPVEDAKEFAKII-PNHKLEIIEGADHNYT-GHQSQLVSLGLEFIKTRI 259 (269)
T ss_pred eccCCceeechhHHHHHHhc-cCCceEEecCCCcCcc-chhhhHhhhcceeEEeee
Confidence 99999999999999999976 8899999999 89764 344466666666665443
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.6e-16 Score=147.22 Aligned_cols=228 Identities=20% Similarity=0.215 Sum_probs=145.6
Q ss_pred ccccccCCeEEEEEEcCC---C----CCeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 018750 17 DAALNDNGIKIFYRTYGR---G----PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~---~----~p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
..+...+|.+++.+...+ + -|+||++||.+..... |......|+. +||.
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~----------------------~G~~ 425 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS----------------------AGYA 425 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc----------------------CCeE
Confidence 344555788888776643 2 2789999999865544 5667777777 7999
Q ss_pred EEEecCCCCCCCC-----CCC-CCCccchHhHHHHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHhCCcccceEEEe
Q 018750 88 VCAFDNRGMGRSS-----VPV-KKTEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (351)
Q Consensus 88 vi~~D~~G~G~S~-----~~~-~~~~~~~~~~~~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~ 158 (351)
|+.++.||.+.-. ... +......+|+.+.+. ++...+. +++.+.|||+||.+++.++...| .+++.+..
T Consensus 426 V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~ 503 (620)
T COG1506 426 VLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAV 503 (620)
T ss_pred EEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEec
Confidence 9999999765421 111 112335566666665 4444432 48999999999999999999988 67777766
Q ss_pred ccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcc
Q 018750 159 NVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (351)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
.+..... . ......... .. ............. +.+
T Consensus 504 ~~~~~~~---------~------~~~~~~~~~--------~~---~~~~~~~~~~~~~---~~~---------------- 538 (620)
T COG1506 504 AGGVDWL---------L------YFGESTEGL--------RF---DPEENGGGPPEDR---EKY---------------- 538 (620)
T ss_pred cCcchhh---------h------hccccchhh--------cC---CHHHhCCCcccCh---HHH----------------
Confidence 6542100 0 000000000 00 0000000000000 000
Q ss_pred hhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-Cccccc-cChHHHHHH
Q 018750 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSH-ERTEEVNQA 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~-~~p~~~~~~ 313 (351)
..........++++|+|+|||++|..||.+.+.++.+.|. .+.+++++|+ ||.+.- ++...+.+.
T Consensus 539 ----------~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~ 608 (620)
T COG1506 539 ----------EDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKE 608 (620)
T ss_pred ----------HhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHH
Confidence 1112334567889999999999999999999999998873 3578899998 997765 567778899
Q ss_pred HHHHHHhcCC
Q 018750 314 LIDLIKASEK 323 (351)
Q Consensus 314 i~~fl~~~~~ 323 (351)
+.+|+++...
T Consensus 609 ~~~~~~~~~~ 618 (620)
T COG1506 609 ILDWFKRHLK 618 (620)
T ss_pred HHHHHHHHhc
Confidence 9999987653
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=134.15 Aligned_cols=252 Identities=13% Similarity=0.160 Sum_probs=131.5
Q ss_pred CCCeEEEEecCCCCcc-ch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTHD-AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
..|+||++||+.+++. .| ..++..+.+ +||+|++++.||+|.|.-... ..|+ ..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~----------------------~G~r~VVfN~RG~~g~~LtTp-r~f~-ag 179 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQR----------------------KGYRVVVFNHRGLGGSKLTTP-RLFT-AG 179 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHh----------------------CCcEEEEECCCCCCCCccCCC-ceee-cC
Confidence 4589999999977664 33 445555555 699999999999999986553 2222 22
Q ss_pred HHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcc--cceEEEeccCCCCCCCCCccchhhhHHHHhhcccC
Q 018750 113 MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (351)
Q Consensus 113 ~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (351)
+.+|+.++++++ ...++..+|.||||++.+.|..+..++ +.+.+.++.+.........+...............
T Consensus 180 ~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~ 259 (409)
T KOG1838|consen 180 WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTL 259 (409)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHH
Confidence 344555555444 456899999999999999998876543 44444444331100000000000000000000000
Q ss_pred CHHHHhhcCccccccHHHHHHhhcCCch-hhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
...... ......++..... +........+.+...-....+++.... .++ ........+.+|++|+|
T Consensus 260 ~l~~~~---------~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~d-eYY---~~aSs~~~v~~I~VP~L 326 (409)
T KOG1838|consen 260 NLKRIV---------LRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVD-EYY---KKASSSNYVDKIKVPLL 326 (409)
T ss_pred hHHHHH---------hhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHH-HHH---hhcchhhhcccccccEE
Confidence 000000 0000000000000 000000122222222233334444322 222 12344578899999999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcC-CCccccccC----hHHH-HHHHHHHHHhcCC
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHER----TEEV-NQALIDLIKASEK 323 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~----p~~~-~~~i~~fl~~~~~ 323 (351)
+|++.+|+++|+...-.-..+-.|+.-+++-. |||..++|. +... .+.+.+|+.....
T Consensus 327 ~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 327 CINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred EEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 99999999999865433333224666555555 699999886 2233 3337777765543
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.3e-16 Score=127.93 Aligned_cols=261 Identities=16% Similarity=0.179 Sum_probs=148.9
Q ss_pred ccccCCeEEEEEEcCC---CCCeEEEEecCCCCccc-hHHHH-----HHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 19 ALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQL-----KGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~-~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.++..-..+++...|+ ++|++|-.|-.|.+... |..++ ..+.+ .+-++
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-----------------------~f~i~ 59 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-----------------------NFCIY 59 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-----------------------TSEEE
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-----------------------ceEEE
Confidence 4555667888888885 36889999999988765 66654 45665 89999
Q ss_pred EecCCCCCCCCC--CCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 018750 90 AFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 90 ~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
-+|.||+..... +.+...-|++++++++..++++++++.++.+|--.||.|..++|..+|++|.++||+++.+..
T Consensus 60 Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~--- 136 (283)
T PF03096_consen 60 HIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA--- 136 (283)
T ss_dssp EEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S----
T ss_pred EEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC---
Confidence 999999976443 333334589999999999999999999999999999999999999999999999999987421
Q ss_pred CCccchhhhHHHHh-hcccCCHHHHhhcCccccccHHHHHHhhcCCch--hhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 168 CPKLDLQTLSIAIR-FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 168 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
+.+.......... .+. ............+...++.... ..+..+.+.+.+..... .......+.++
T Consensus 137 -~gw~Ew~~~K~~~~~L~--------~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~N--p~Nl~~f~~sy 205 (283)
T PF03096_consen 137 -AGWMEWFYQKLSSWLLY--------SYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERIN--PKNLALFLNSY 205 (283)
T ss_dssp ---HHHHHHHHHH---------------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TT--HHHHHHHHHHH
T ss_pred -ccHHHHHHHHHhccccc--------ccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCC--HHHHHHHHHHH
Confidence 1111111111110 000 0000111111122232222111 22334444444332111 01111111111
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
. .+.+.....+...||+|++.|++.+.. +.+.++..++.| +.++..+++ |=.+..|+|+.+++.+.-||...
T Consensus 206 ~---~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 206 N---SRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp H---T-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred h---ccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 1 112233344566799999999998865 456778888854 577888887 89999999999999999999764
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.70 E-value=9e-16 Score=127.15 Aligned_cols=184 Identities=20% Similarity=0.237 Sum_probs=111.1
Q ss_pred CCeEEEEecCCCCCCCCC------CCCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceE
Q 018750 84 AGIEVCAFDNRGMGRSSV------PVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~------~~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l 155 (351)
+||.|+.+|.||.+.... ........++|.++.+..+++.. ..+++.++|+|+||.+++.++..+|++++++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~ 92 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAA 92 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEE
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeee
Confidence 799999999999874321 11111223333443343443332 2368999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCC
Q 018750 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (351)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (351)
|..++......... ... .+........ .........+...
T Consensus 93 v~~~g~~d~~~~~~---~~~-----------------------~~~~~~~~~~-~~~~~~~~~~~~~------------- 132 (213)
T PF00326_consen 93 VAGAGVSDLFSYYG---TTD-----------------------IYTKAEYLEY-GDPWDNPEFYREL------------- 132 (213)
T ss_dssp EEESE-SSTTCSBH---HTC-----------------------CHHHGHHHHH-SSTTTSHHHHHHH-------------
T ss_pred eccceecchhcccc---ccc-----------------------cccccccccc-Cccchhhhhhhhh-------------
Confidence 99997631110000 000 0000011111 1110011111100
Q ss_pred CcchhhhhhhcccCCHHHHHHhhc--cCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-Ccccc-ccChH
Q 018750 236 GFDGQIHACWMHKMTQKDIQTIRS--AGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVS-HERTE 308 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~-~~~p~ 308 (351)
.....+.+ +++|+|++||++|..||++.+..+.+.+. .+.+++++++ ||... .+...
T Consensus 133 ----------------s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 133 ----------------SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp ----------------HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred ----------------ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 11122334 77999999999999999999999988772 3588999998 99544 45566
Q ss_pred HHHHHHHHHHHhcCC
Q 018750 309 EVNQALIDLIKASEK 323 (351)
Q Consensus 309 ~~~~~i~~fl~~~~~ 323 (351)
++.+.+.+||++..+
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 889999999987643
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.3e-15 Score=125.96 Aligned_cols=106 Identities=24% Similarity=0.312 Sum_probs=76.2
Q ss_pred CCCeEEEEecCCCCccchHHH--HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC--CCCCCCCCCC-------
Q 018750 35 GPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN--RGMGRSSVPV------- 103 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--~G~G~S~~~~------- 103 (351)
+.|+|+++||++++...|... +..++.. .|+.|+++|. +|+|.+....
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~---------------------~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~ 99 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAE---------------------HGLALVAPDTSPRGTGIAGEDDAWDFGKG 99 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhh---------------------cCcEEEEeCCCCCcCCCCCCcccccccCC
Confidence 357899999999988877432 3344331 4899999998 5555332100
Q ss_pred -----------CCCccchHh-HHHHHHHHHHH---hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 104 -----------KKTEYTTKI-MAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 104 -----------~~~~~~~~~-~~~dl~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
....++..+ +++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++.
T Consensus 100 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 100 AGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred ccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 001223333 45777777776 34568999999999999999999999999999999876
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=131.93 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=75.3
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
..|+|||+||++.+...|..+++.|++ .||.|+++|++|++.+.... ...+..+..
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las----------------------~G~~VvapD~~g~~~~~~~~--~i~d~~~~~ 106 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIAS----------------------HGFIVVAPQLYTLAGPDGTD--EIKDAAAVI 106 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHh----------------------CCCEEEEecCCCcCCCCchh--hHHHHHHHH
Confidence 447899999999999999999999998 69999999999875432111 111222223
Q ss_pred HHHHHHHHH-------hCCcceEEEEEchhhHHHHHHHHhCCc-----ccceEEEeccC
Q 018750 115 KDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (351)
Q Consensus 115 ~dl~~~l~~-------~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~ 161 (351)
+.+.+.++. .+.++++++||||||.+++.+|..+++ +++++|+++|.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 333332222 233679999999999999999998874 58899999875
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.5e-15 Score=123.91 Aligned_cols=216 Identities=16% Similarity=0.205 Sum_probs=134.4
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCC-eEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
+|+|+|+.+|+...|.++++.|.. . +.|+.++.+|.+.... ...+++++++.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------------~~~~v~~i~~~~~~~~~~----~~~si~~la~~ 54 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------------DVIGVYGIEYPGRGDDEP----PPDSIEELASR 54 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------------TEEEEEEECSTTSCTTSH----EESSHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------------CeEEEEEEecCCCCCCCC----CCCCHHHHHHH
Confidence 699999999999999999999997 5 9999999999983332 24589999999
Q ss_pred HHHHHHHhCCc-ceEEEEEchhhHHHHHHHHhC---CcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHh
Q 018750 117 VIALMDHLGWK-QAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (351)
Q Consensus 117 l~~~l~~~~~~-~v~lvG~S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (351)
..+.+.....+ ++.|+|||+||.+|.++|.+. ...|..++++++..+................
T Consensus 55 y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~------------- 121 (229)
T PF00975_consen 55 YAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQF------------- 121 (229)
T ss_dssp HHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHH-------------
T ss_pred HHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHH-------------
Confidence 88888777655 999999999999999999864 3459999999976422111000000000000
Q ss_pred hcCccccccHHHHHHhhcC---CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 193 AVDLDTHYSQEYLEEYVGS---STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
...+...... ............+.+... ...... .. ......-.+|.++...
T Consensus 122 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--~~---~~~~~~~~~~~~~~~~ 176 (229)
T PF00975_consen 122 ---------IEELRRIGGTPDASLEDEELLARLLRALRDD-----------FQALEN--YS---IRPIDKQKVPITLFYA 176 (229)
T ss_dssp ---------HHHHHHHCHHHHHHCHHHHHHHHHHHHHHHH-----------HHHHHT--CS----TTSSSESSEEEEEEE
T ss_pred ---------HHHHHHhcCCchhhhcCHHHHHHHHHHHHHH-----------HHHHhh--cc---CCccccCCCcEEEEec
Confidence 0000000000 000000011111111000 000000 00 0000111467899999
Q ss_pred cCCccCCHH---HHHHHHHHhCCCceEEEcCCCcccccc-ChHHHHHHHHHHH
Q 018750 270 RHDVIAQIC---YARRLAEKLYPVARMIDLPGGHLVSHE-RTEEVNQALIDLI 318 (351)
Q Consensus 270 ~~D~~~~~~---~~~~~~~~~~~~~~~~~~~ggH~~~~~-~p~~~~~~i~~fl 318 (351)
.+|+..... ....|.+......+++.++|+|+.++. +..++++.|.++|
T Consensus 177 ~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 177 LDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp CSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHSTTHHHHHHHHHHHH
T ss_pred CCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecchHHHHHHHHHhccC
Confidence 999988766 344466655456789999999998887 7788999998876
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.3e-15 Score=120.92 Aligned_cols=268 Identities=16% Similarity=0.183 Sum_probs=170.6
Q ss_pred CccccccCCeEEEEEEcCC---CCCeEEEEecCCCCccc-hHHHH-----HHhcCCCCCCCCchhhhcccccCCCCCCCe
Q 018750 16 PDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQL-----KGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~-~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (351)
.++.++..-..+++...|+ ++|++|-.|.++.++.. |..++ ..+.. .|
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-----------------------~f 79 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-----------------------HF 79 (326)
T ss_pred eeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-----------------------he
Confidence 3455666667788888885 36788999999988765 66553 45555 69
Q ss_pred EEEEecCCCCCCCC--CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC
Q 018750 87 EVCAFDNRGMGRSS--VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (351)
Q Consensus 87 ~vi~~D~~G~G~S~--~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
-|+-+|.|||-... .+.+...-|+++++++|..++++++.+.++-+|.-.|+.|..++|..+|++|.+|||+++.+..
T Consensus 80 cv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 80 CVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA 159 (326)
T ss_pred EEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC
Confidence 99999999995543 3433334589999999999999999999999999999999999999999999999999987422
Q ss_pred CCCCCccchhhhHHHH-hhcccCCHHHHhhcCccccccHHHHHHhhcCCc--hhhhhHHHHHhhhhhccCCCCCCcchhh
Q 018750 165 FQCCPKLDLQTLSIAI-RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQI 241 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
+.+..+...... .++.. .........-.+...++... ......++|.+.+....... .+...+
T Consensus 160 ----~gwiew~~~K~~s~~l~~--------~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~--Nl~~fl 225 (326)
T KOG2931|consen 160 ----KGWIEWAYNKVSSNLLYY--------YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPK--NLALFL 225 (326)
T ss_pred ----chHHHHHHHHHHHHHHHh--------hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChh--HHHHHH
Confidence 111111111111 00000 00011111222333333322 23455566666554432211 111112
Q ss_pred hhhhccc-CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 242 HACWMHK-MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 242 ~~~~~~~-~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
.++..+. +..........++||+|++.|++.+.+ +...++..++.| ++++..+.+ |-.+..++|..+++.+.-|+
T Consensus 226 ~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Fl 303 (326)
T KOG2931|consen 226 NAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFL 303 (326)
T ss_pred HHhcCCCCccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHH
Confidence 2211111 110000111256799999999988865 455666666633 577788877 88999999999999999999
Q ss_pred HhcC
Q 018750 319 KASE 322 (351)
Q Consensus 319 ~~~~ 322 (351)
....
T Consensus 304 qG~G 307 (326)
T KOG2931|consen 304 QGMG 307 (326)
T ss_pred ccCC
Confidence 8764
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.3e-15 Score=132.66 Aligned_cols=101 Identities=13% Similarity=0.171 Sum_probs=80.1
Q ss_pred CCeEEEEecCCCCccch-----HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 36 PTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
+.+||+++.+......+ ..+++.|.+ +||+|+.+|+++-+... ..+++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~----------------------qG~~VflIsW~nP~~~~-----r~~~l 267 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLK----------------------NQLQVFIISWRNPDKAH-----REWGL 267 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHH----------------------cCCeEEEEeCCCCChhh-----cCCCH
Confidence 34699999988655555 356666665 89999999999877664 35578
Q ss_pred HhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHH----HHHhCCc-ccceEEEeccCCC
Q 018750 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACK----LAAMVPE-RVLSLALLNVTGG 163 (351)
Q Consensus 111 ~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~ 163 (351)
+++++.+.+.++.+ |.+++.++|+|+||.+++. +++++++ +|++++++.+...
T Consensus 268 dDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 268 STYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 88888777777665 6789999999999999997 7888885 7999999987643
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=119.75 Aligned_cols=178 Identities=22% Similarity=0.219 Sum_probs=106.0
Q ss_pred CCCCCeEEEEecCCCCccchHHHHH-HhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC------CCC---CCC-
Q 018750 33 GRGPTKVILITGLAGTHDAWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG------MGR---SSV- 101 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G------~G~---S~~- 101 (351)
++..|+||++||+|.+...+..+.. .+.. ....++.++-|- .|. +-.
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~----------------------~~~~~i~p~ap~~~~~~~~g~~~~~Wf~ 68 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLAL----------------------PNTRFISPRAPSRPVTVPGGYRMPAWFD 68 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCS----------------------TTEEEEEE---EEE-GGGTT-EEE-SS-
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccC----------------------CceEEEeccCCCCCcccccccCCCceee
Confidence 3466789999999999976665555 2222 367777765431 122 110
Q ss_pred ----CCCC--CccchHhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 102 ----PVKK--TEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 102 ----~~~~--~~~~~~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
.... ..-.+.+.++.+.++++.. ..+++++.|+|+||++|+.++.++|+.+.++|.+++..+....
T Consensus 69 ~~~~~~~~~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--- 145 (216)
T PF02230_consen 69 IYDFDPEGPEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--- 145 (216)
T ss_dssp BSCSSSSSEB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---
T ss_pred ccCCCcchhhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---
Confidence 0100 1123444455555665542 3368999999999999999999999999999999975210000
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
.
T Consensus 146 -------------------------------------------------------------------------------~ 146 (216)
T PF02230_consen 146 -------------------------------------------------------------------------------L 146 (216)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..... ..-++|++++||++|+++|.+.++...+.+. .+.+++.+++ ||... .+..+.+.+||++
T Consensus 147 ~~~~~--~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 147 EDRPE--ALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp HCCHC--CCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred ccccc--ccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 00000 0115799999999999999998888887762 3578899997 99775 4555667777765
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.3e-15 Score=118.02 Aligned_cols=172 Identities=20% Similarity=0.187 Sum_probs=113.9
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC--CCCCCC--CCCCCccc-
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG--MGRSSV--PVKKTEYT- 109 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~S~~--~~~~~~~~- 109 (351)
..|+||++||+|++...+.++...+.. ++.++.+.-+- .|.-.. ......++
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P-----------------------~~~~is~rG~v~~~g~~~~f~~~~~~~~d~ 73 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILP-----------------------NATLVSPRGPVAENGGPRFFRRYDEGSFDQ 73 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCC-----------------------CCeEEcCCCCccccCcccceeecCCCccch
Confidence 456799999999998887776665555 55555543210 000000 00011222
Q ss_pred ------hHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHh
Q 018750 110 ------TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (351)
Q Consensus 110 ------~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
.+.+++-+....+..+. ++++++|+|.||++++.+..++|+.++++|++++..+...
T Consensus 74 edl~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------- 138 (207)
T COG0400 74 EDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------- 138 (207)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC---------------
Confidence 33344444555555666 6899999999999999999999999999999998631100
Q ss_pred hcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccC
Q 018750 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (351)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (351)
. ..-..-.
T Consensus 139 ----------------------------------------------------------------------~--~~~~~~~ 146 (207)
T COG0400 139 ----------------------------------------------------------------------E--LLPDLAG 146 (207)
T ss_pred ----------------------------------------------------------------------c--cccccCC
Confidence 0 0001123
Q ss_pred ccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 262 FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 262 ~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.|+++++|+.|+++|...+.++.+.+ ..+++...+++||....+. .+.+.+|+.+
T Consensus 147 ~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e~----~~~~~~wl~~ 204 (207)
T COG0400 147 TPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPEE----LEAARSWLAN 204 (207)
T ss_pred CeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHHH----HHHHHHHHHh
Confidence 69999999999999999888888776 3467788888999775544 4445556654
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=119.13 Aligned_cols=178 Identities=21% Similarity=0.146 Sum_probs=115.8
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC-CCCCCCCCccc----
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVKKTEYT---- 109 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~-S~~~~~~~~~~---- 109 (351)
+.|.||++|++.|-......+++.|++ +||.|+++|+.+-.. ...........
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~----------------------~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAE----------------------EGYVVLAPDLFGGRGAPPSDPEEAFAAMREL 70 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHH----------------------TT-EEEEE-CCCCTS--CCCHHCHHHHHHHC
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHh----------------------cCCCEEecccccCCCCCccchhhHHHHHHHH
Confidence 347899999998877777788889988 799999999864433 11111000000
Q ss_pred ----hHhHHHHHHHHHHHh---C---CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 110 ----TKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 110 ----~~~~~~dl~~~l~~~---~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
.+...+++.+.++.+ . .+++.++|+||||.+++.++... +.+++.|..-|..
T Consensus 71 ~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~----------------- 132 (218)
T PF01738_consen 71 FAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS----------------- 132 (218)
T ss_dssp HHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS-----------------
T ss_pred HhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC-----------------
Confidence 234566776666655 2 35899999999999999999887 5789888876510
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
..........+
T Consensus 133 ---------------------------------------------------------------------~~~~~~~~~~~ 143 (218)
T PF01738_consen 133 ---------------------------------------------------------------------PPPPPLEDAPK 143 (218)
T ss_dssp ---------------------------------------------------------------------SGGGHHHHGGG
T ss_pred ---------------------------------------------------------------------CCCcchhhhcc
Confidence 00112234567
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccC--------hHHHHHHHHHHHHhc
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHER--------TEEVNQALIDLIKAS 321 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~--------p~~~~~~i~~fl~~~ 321 (351)
+++|+++++|++|+.++.+..+.+.+.+ ....++++++| +|...... .++-.+.+.+||++.
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999877777766 45789999998 99665432 245667788888653
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.62 E-value=8e-15 Score=130.83 Aligned_cols=113 Identities=23% Similarity=0.416 Sum_probs=85.2
Q ss_pred cCCCCCeEEEEecCCCCc--cchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc
Q 018750 32 YGRGPTKVILITGLAGTH--DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (351)
Q Consensus 32 ~g~~~p~vv~~HG~~~~~--~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (351)
.....|++|++||++++. ..|.+ +...|... ...++||++|++|+|.+..+.. ..
T Consensus 37 Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~--------------------~~d~nVI~VDw~g~g~s~y~~a--~~ 94 (442)
T TIGR03230 37 FNHETKTFIVIHGWTVTGMFESWVPKLVAALYER--------------------EPSANVIVVDWLSRAQQHYPTS--AA 94 (442)
T ss_pred cCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhc--------------------cCCCEEEEEECCCcCCCCCccc--cc
Confidence 344668899999998754 34654 45555320 0269999999999998865532 22
Q ss_pred chHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 109 TTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
....+++++.++++.+ +.++++||||||||.+|..++...|++|.++++++|+.+.+.
T Consensus 95 ~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 95 YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCccc
Confidence 3456667777777754 357999999999999999999999999999999999876554
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-14 Score=125.94 Aligned_cols=211 Identities=18% Similarity=0.214 Sum_probs=113.4
Q ss_pred CCeEEEEecCCCCccchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 36 PTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
.|+||++.|+-+..+.+.. +.+.|.. +|+.++++|.||.|.|....- ..+.+.+.
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~----------------------rGiA~LtvDmPG~G~s~~~~l--~~D~~~l~ 245 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAP----------------------RGIAMLTVDMPGQGESPKWPL--TQDSSRLH 245 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHH----------------------CT-EEEEE--TTSGGGTTT-S---S-CCHHH
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHh----------------------CCCEEEEEccCCCcccccCCC--CcCHHHHH
Confidence 3667777777776655444 4456766 699999999999999864332 22334455
Q ss_pred HHHHHHHHHhC---CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 115 KDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 115 ~dl~~~l~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
..+.+.+.... ..+|.++|.|+||.+|+++|..+++|++++|.++++.-.+ +.... .... .+.
T Consensus 246 ~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~----------ft~~~-~~~~-~P~-- 311 (411)
T PF06500_consen 246 QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF----------FTDPE-WQQR-VPD-- 311 (411)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG----------GH-HH-HHTT-S-H--
T ss_pred HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh----------hccHH-HHhc-CCH--
Confidence 55555555543 3589999999999999999999889999999999863111 00000 0000 000
Q ss_pred hhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh--hccCccEEEEee
Q 018750 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI--RSAGFLVSVIHG 269 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlii~g 269 (351)
.....+...++...............++. .. ...+ .+.++|+|.+.|
T Consensus 312 --------my~d~LA~rlG~~~~~~~~l~~el~~~SL--------------------k~---qGlL~~rr~~~plL~i~~ 360 (411)
T PF06500_consen 312 --------MYLDVLASRLGMAAVSDESLRGELNKFSL--------------------KT---QGLLSGRRCPTPLLAING 360 (411)
T ss_dssp --------HHHHHHHHHCT-SCE-HHHHHHHGGGGST--------------------TT---TTTTTSS-BSS-EEEEEE
T ss_pred --------HHHHHHHHHhCCccCCHHHHHHHHHhcCc--------------------ch---hccccCCCCCcceEEeec
Confidence 01112222222222111111111111110 00 0122 567789999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCC-C-ccccccChHHHHHHHHHHHHh
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-G-HLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-g-H~~~~~~p~~~~~~i~~fl~~ 320 (351)
++|+++|.+..+-++.. ..+.+...++. . |..+ +.-...+.+||++
T Consensus 361 ~~D~v~P~eD~~lia~~-s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 361 EDDPVSPIEDSRLIAES-STDGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp TT-SSS-HHHHHHHHHT-BTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHhc-CCCCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 99999999999988885 46677777775 4 5443 3555666677654
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-14 Score=132.86 Aligned_cols=117 Identities=17% Similarity=0.123 Sum_probs=88.6
Q ss_pred ccCCeEEEEEEcC---C-CCCeEEEEecCCCCcc---ch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 21 NDNGIKIFYRTYG---R-GPTKVILITGLAGTHD---AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 21 ~~~g~~l~y~~~g---~-~~p~vv~~HG~~~~~~---~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
..||.+|++..+- . ..|+||++||++.+.. .+ ......|.+ +||.|+++|
T Consensus 3 ~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~----------------------~Gy~vv~~D 60 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA----------------------QGYAVVIQD 60 (550)
T ss_pred CCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHh----------------------CCcEEEEEe
Confidence 3478888865442 2 4478999999987653 12 223445555 699999999
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC-----cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+||+|.|+.... .++ ...++|+.++++.+.. .++.++|+|+||.+++.+|..+|++++++|..++..
T Consensus 61 ~RG~g~S~g~~~--~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 61 TRGRGASEGEFD--LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred ccccccCCCceE--ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 999999986542 222 5677788888877632 489999999999999999999999999999988764
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.60 E-value=6e-15 Score=126.13 Aligned_cols=119 Identities=16% Similarity=0.275 Sum_probs=87.0
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCCc-cchHHH-HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~~-~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
++..+.+...++..|++|++||++++. ..|... ...+... .+++|+++|+++++.+.
T Consensus 23 ~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~---------------------~~~nVi~vD~~~~~~~~ 81 (275)
T cd00707 23 DPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSR---------------------GDYNVIVVDWGRGANPN 81 (275)
T ss_pred ChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhc---------------------CCCEEEEEECccccccC
Confidence 355677777777788999999999887 566543 3434320 37999999999884332
Q ss_pred CCCCCCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC
Q 018750 101 VPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
.+. ...+...+.+++.++++.+ +.+++++|||||||.+|..++..+|++|.++++++|+.+.
T Consensus 82 y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 82 YPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred hHH--HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 211 2234555556666666554 3468999999999999999999999999999999998643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-14 Score=118.21 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=70.9
Q ss_pred CCCeEEEEecCCCCccchH---HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC---CCc-
Q 018750 35 GPTKVILITGLAGTHDAWG---PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK---KTE- 107 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~---~~~- 107 (351)
..|+||++||.+++...+. .+...+.+ .||.|+++|.+|++.+..... ...
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~----------------------~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~ 69 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADR----------------------YGFVLVAPEQTSYNSSNNCWDWFFTHHR 69 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHh----------------------CCeEEEecCCcCccccCCCCCCCCcccc
Confidence 4678999999998876554 23333333 599999999999875432100 000
Q ss_pred cchHhHHHHHHHHHH----HhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 108 YTTKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 108 ~~~~~~~~dl~~~l~----~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
........++.++++ ..+. ++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 000112233333333 3333 589999999999999999999999999999988763
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-13 Score=120.70 Aligned_cols=257 Identities=13% Similarity=0.118 Sum_probs=143.4
Q ss_pred CeEEEEecCCCCccch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 37 TKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
|+||++..+.+....+ +.+++.|.. |+.|+..|+..-+...... ..++++|+++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-----------------------g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~ 157 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-----------------------DHDVYITDWVNARMVPLSA--GKFDLEDYID 157 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-----------------------CCcEEEEeCCCCCCCchhc--CCCCHHHHHH
Confidence 6799999988655432 445555554 9999999998666543222 4678999999
Q ss_pred HHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-----CcccceEEEeccCCCCCCCCCccchh-----hhHHHHhhccc
Q 018750 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTGGGFQCCPKLDLQ-----TLSIAIRFFRA 185 (351)
Q Consensus 116 dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 185 (351)
.+.++++++|.+ ++++|+|+||..++.+++.. |.++++++++.++..... .|..... .+....+....
T Consensus 158 ~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~-~p~~v~~~a~~~~i~~~~~~~i~ 235 (406)
T TIGR01849 158 YLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA-SPTVVNELAREKPIEWFQHNVIM 235 (406)
T ss_pred HHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC-CCchHHHHhhcccHHHHHHHhhh
Confidence 999999999977 99999999999987766654 667999999988753221 1111000 00111111100
Q ss_pred ------------CCHHHHhh-----cCcccc--ccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 186 ------------KTPEKRAA-----VDLDTH--YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 186 ------------~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
..+..... ...... ....++................+.+.+..........+...+...+.
T Consensus 236 ~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~ 315 (406)
T TIGR01849 236 RVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQ 315 (406)
T ss_pred ccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHH
Confidence 00000000 000000 00111122221111111111111121111111111111111211111
Q ss_pred cc-CC------HHHHHHhhccC-ccEEEEeecCCccCCHHHHHHHHHHh---CC-CceEEEcC-CCcccccc---ChHHH
Q 018750 247 HK-MT------QKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---YP-VARMIDLP-GGHLVSHE---RTEEV 310 (351)
Q Consensus 247 ~~-~~------~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~---~~-~~~~~~~~-ggH~~~~~---~p~~~ 310 (351)
.. +. ....-.+++|+ +|+|.+.|++|.++|+.....+.+.+ .+ ..+....+ +||...+. -.+++
T Consensus 316 ~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i 395 (406)
T TIGR01849 316 QFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEI 395 (406)
T ss_pred hCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhh
Confidence 11 01 11123467888 99999999999999999999888853 22 34455664 49987664 45789
Q ss_pred HHHHHHHHHh
Q 018750 311 NQALIDLIKA 320 (351)
Q Consensus 311 ~~~i~~fl~~ 320 (351)
.-.|.+||.+
T Consensus 396 ~P~i~~wl~~ 405 (406)
T TIGR01849 396 YPLVREFIRR 405 (406)
T ss_pred chHHHHHHHh
Confidence 9999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.2e-13 Score=115.46 Aligned_cols=207 Identities=21% Similarity=0.165 Sum_probs=114.2
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC-CCCCCC-----------
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVK----------- 104 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~-S~~~~~----------- 104 (351)
|.||.+||.++....|......-. +||.|+.+|.||+|. +.....
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~~a~-----------------------~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~ 140 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLPWAA-----------------------AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT 140 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHHHHH-----------------------TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT
T ss_pred CEEEEecCCCCCCCCccccccccc-----------------------CCeEEEEecCCCCCCCCCCccccCCCCCccHHh
Confidence 689999999998777766555444 499999999999993 321100
Q ss_pred ------CCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 105 ------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
...+-...+..|....++.+ +.+++.+.|.|+||.+++.+|...+ +|++++...|....+
T Consensus 141 ~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~------- 212 (320)
T PF05448_consen 141 RGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF------- 212 (320)
T ss_dssp TTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH-------
T ss_pred cCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch-------
Confidence 01111233445555555544 2357999999999999999999886 699999988753110
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc---CCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
... ...... ......+..++. .........-+.+.
T Consensus 213 -~~~---~~~~~~-------------~~~y~~~~~~~~~~d~~~~~~~~v~~~L~------------------------- 250 (320)
T PF05448_consen 213 -RRA---LELRAD-------------EGPYPEIRRYFRWRDPHHEREPEVFETLS------------------------- 250 (320)
T ss_dssp -HHH---HHHT---------------STTTHHHHHHHHHHSCTHCHHHHHHHHHH-------------------------
T ss_pred -hhh---hhcCCc-------------cccHHHHHHHHhccCCCcccHHHHHHHHh-------------------------
Confidence 000 000000 000011111111 11111111111111
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHH-HHHHHHHHHh
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEV-NQALIDLIKA 320 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~-~~~i~~fl~~ 320 (351)
-.+.....+.|+||+++-.|-.|.++||...-...+.+...+++.+++. ||.. ..+. .+...+||.+
T Consensus 251 Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 251 YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY----GPEFQEDKQLNFLKE 319 (320)
T ss_dssp TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SST----THHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc----hhhHHHHHHHHHHhc
Confidence 1233455678999999999999999999999999999876789999997 8844 3344 6667777765
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=108.47 Aligned_cols=154 Identities=21% Similarity=0.277 Sum_probs=101.4
Q ss_pred EEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHH
Q 018750 39 VILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (351)
Q Consensus 39 vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (351)
|+++||++++. ..|.+.++.-.+ ..++|-.+++ + .-+.+++.+.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~----------------------~~~~V~~~~~------~------~P~~~~W~~~l 46 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE----------------------NSVRVEQPDW------D------NPDLDEWVQAL 46 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT----------------------TSEEEEEC--------T------S--HHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC----------------------CCeEEecccc------C------CCCHHHHHHHH
Confidence 68999998876 578777654443 2478877776 1 22678888888
Q ss_pred HHHHHHhCCcceEEEEEchhhHHHHHHH-HhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCc
Q 018750 118 IALMDHLGWKQAHVFGHSMGAMIACKLA-AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196 (351)
Q Consensus 118 ~~~l~~~~~~~v~lvG~S~Gg~~a~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (351)
.+.+.... +++++||||+|+..++.++ .....+|.+++|++|.... ... ..
T Consensus 47 ~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~-------~~~----------~~---------- 98 (171)
T PF06821_consen 47 DQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD-------DPE----------PF---------- 98 (171)
T ss_dssp HHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG-------CHH----------CC----------
T ss_pred HHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc-------ccc----------ch----------
Confidence 88777664 6799999999999999999 7778899999999986210 000 00
Q ss_pred cccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCC
Q 018750 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (351)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~ 276 (351)
. ..... +... ....+.+|.++|.+++|+++|
T Consensus 99 --------~-~~~~~-------------------------------------f~~~---p~~~l~~~~~viaS~nDp~vp 129 (171)
T PF06821_consen 99 --------P-PELDG-------------------------------------FTPL---PRDPLPFPSIVIASDNDPYVP 129 (171)
T ss_dssp --------T-CGGCC-------------------------------------CTTS---HCCHHHCCEEEEEETTBSSS-
T ss_pred --------h-hhccc-------------------------------------cccC---cccccCCCeEEEEcCCCCccC
Confidence 0 00000 0000 011223577999999999999
Q ss_pred HHHHHHHHHHhCCCceEEEcCC-Ccccccc
Q 018750 277 ICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (351)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~ 305 (351)
.+.++++++.+ +++++.+++ ||+...+
T Consensus 130 ~~~a~~~A~~l--~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 130 FERAQRLAQRL--GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHHHHH--T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHHHHc--CCCeEECCCCCCccccc
Confidence 99999999998 889999997 9987654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-13 Score=104.58 Aligned_cols=173 Identities=20% Similarity=0.234 Sum_probs=116.6
Q ss_pred CCCCeEEEEecCC---CC--ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc
Q 018750 34 RGPTKVILITGLA---GT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (351)
Q Consensus 34 ~~~p~vv~~HG~~---~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (351)
+..|..|++|.-+ |+ ...-..+...|.+ +||.++.+|+||-|+|...-+...-
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~----------------------~G~atlRfNfRgVG~S~G~fD~GiG 83 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVK----------------------RGFATLRFNFRGVGRSQGEFDNGIG 83 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHh----------------------CCceEEeecccccccccCcccCCcc
Confidence 3556778888643 22 2233455666666 7999999999999999876543222
Q ss_pred chHhHHHHHHHHHHHhCCcc-eEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCC
Q 018750 109 TTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT 187 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (351)
..+|....+.-+.......+ ..+.|+|+|++++..+|.+.|+ ....+.+.+...
T Consensus 84 E~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~------------------------ 138 (210)
T COG2945 84 ELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN------------------------ 138 (210)
T ss_pred hHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC------------------------
Confidence 23333332222222222223 4689999999999999999886 555555554310
Q ss_pred HHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEE
Q 018750 188 PEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (351)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 267 (351)
......+....+|.++|
T Consensus 139 ---------------------------------------------------------------~~dfs~l~P~P~~~lvi 155 (210)
T COG2945 139 ---------------------------------------------------------------AYDFSFLAPCPSPGLVI 155 (210)
T ss_pred ---------------------------------------------------------------chhhhhccCCCCCceeE
Confidence 00001234455799999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 268 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
+|+.|.+++....-.+.+. ...+++++++ +|+.+ .+-+++.+.|.+||.
T Consensus 156 ~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 156 QGDADDVVDLVAVLKWQES--IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred ecChhhhhcHHHHHHhhcC--CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 9999999999888888885 4567778888 99875 667799999999995
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.4e-13 Score=127.70 Aligned_cols=111 Identities=23% Similarity=0.262 Sum_probs=89.8
Q ss_pred CCccccccCCeEEEEEEcCCCC----------CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCC
Q 018750 15 APDAALNDNGIKIFYRTYGRGP----------TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~~----------p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
.|..+...++.++.|...|.|. |+|||+||++++...|..+...|.+ +
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~----------------------~ 475 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAA----------------------A 475 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHh----------------------C
Confidence 4556677788888887765542 4799999999999999999999986 5
Q ss_pred CeEEEEecCCCCCCCCCC----------CCCC-----------ccchHhHHHHHHHHHHHhC----------------Cc
Q 018750 85 GIEVCAFDNRGMGRSSVP----------VKKT-----------EYTTKIMAKDVIALMDHLG----------------WK 127 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~----------~~~~-----------~~~~~~~~~dl~~~l~~~~----------------~~ 127 (351)
||+|+++|+||||.|... .... ..++++.+.|+..+...++ ..
T Consensus 476 Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~ 555 (792)
T TIGR03502 476 GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS 555 (792)
T ss_pred CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 999999999999999443 1101 1267899999998888776 24
Q ss_pred ceEEEEEchhhHHHHHHHHh
Q 018750 128 QAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 128 ~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+++++||||||.++..++..
T Consensus 556 ~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 556 KVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cEEEEecCHHHHHHHHHHHh
Confidence 89999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-12 Score=111.98 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=71.8
Q ss_pred CCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
+.|+||++||.+ ++...|..++..|+.. .|+.|+.+|+|.......+. ...+..
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~Vv~vdYrlape~~~p~--~~~D~~ 136 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASY---------------------SGCTVIGIDYTLSPEARFPQ--AIEEIV 136 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHH---------------------cCCEEEEecCCCCCCCCCCC--cHHHHH
Confidence 457899999976 5556778888888751 38999999999655433222 111222
Q ss_pred hHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhC------CcccceEEEeccC
Q 018750 112 IMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVT 161 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~ 161 (351)
+.++.+.+..+.++. ++++|+|+|+||.+|+.++... +.++.++|++.|.
T Consensus 137 ~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 137 AVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred HHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 233334444445554 5899999999999999988753 3578999999875
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-12 Score=110.54 Aligned_cols=110 Identities=21% Similarity=0.237 Sum_probs=91.8
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC----CCCCccchH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP----VKKTEYTTK 111 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 111 (351)
++.+|+++|.+|-.+.|..++..|.+.+ ...+.|+++.+.||-.++.. .....++++
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l-------------------~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~ 62 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKL-------------------NPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQ 62 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhC-------------------CCCCeeEEecCCCCcCCcccccccCCCCccCHH
Confidence 3578999999999999999999888632 13899999999999887765 134688999
Q ss_pred hHHHHHHHHHHHhC------CcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCCCC
Q 018750 112 IMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGG 164 (351)
Q Consensus 112 ~~~~dl~~~l~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 164 (351)
++++...++++.+- ..+++++|||.|++++++...+.+ .+|.+++++-|....
T Consensus 63 ~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 63 DQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 99998888887652 247999999999999999999999 789999999987543
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-12 Score=108.36 Aligned_cols=176 Identities=23% Similarity=0.169 Sum_probs=130.3
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC-CCCCCCCC-C----C---
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-GRSSVPVK-K----T--- 106 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~-~----~--- 106 (351)
.|.||++|++.+-....+.+.+.|+. +||.|+++|+-+. |.+..... . .
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~----------------------~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~ 84 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAK----------------------AGYVVLAPDLYGRQGDPTDIEDEPAELETGLV 84 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHh----------------------CCcEEEechhhccCCCCCcccccHHHHhhhhh
Confidence 38899999999988888999999998 7999999999763 33322110 0 0
Q ss_pred -ccchHhHHHHHHHHHHHhC------CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 107 -EYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 107 -~~~~~~~~~dl~~~l~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
..+..+...|+.+.++.+. .++|.++|+||||.+++.++...| .+++.+..-+.....
T Consensus 85 ~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~-------------- 149 (236)
T COG0412 85 ERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD-------------- 149 (236)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC--------------
Confidence 1233677788888887762 357999999999999999999887 689888877652100
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
......+
T Consensus 150 -------------------------------------------------------------------------~~~~~~~ 156 (236)
T COG0412 150 -------------------------------------------------------------------------DTADAPK 156 (236)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0001256
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCC-CccccccC-----------hHHHHHHHHHHHHhc
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPG-GHLVSHER-----------TEEVNQALIDLIKAS 321 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~~~-----------p~~~~~~i~~fl~~~ 321 (351)
+++|+|++.|+.|..+|....+.+.+.+.. ..++.++++ .|..+.+. .+.-.+.+.+|+++.
T Consensus 157 ~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 157 IKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred ccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999888888877632 477888998 79666331 255677888888764
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-12 Score=105.64 Aligned_cols=228 Identities=18% Similarity=0.142 Sum_probs=140.8
Q ss_pred ccccccCCeEEEEEEc----CC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 17 DAALNDNGIKIFYRTY----GR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~----g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
.++...+|.+|.-+.. ++ .-|.||-.||++++...|..++..-.. ||.|+.+
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~-----------------------Gyavf~M 115 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVA-----------------------GYAVFVM 115 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccccccc-----------------------ceeEEEE
Confidence 3444556666654322 21 237899999999999888777765554 9999999
Q ss_pred cCCCCCCCCC----CCC---------------CCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHH
Q 018750 92 DNRGMGRSSV----PVK---------------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAA 146 (351)
Q Consensus 92 D~~G~G~S~~----~~~---------------~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~ 146 (351)
|.||.|.|.. +.. ...|-......|+..+++.+ ..+++.+.|.|.||.+++.++.
T Consensus 116 dvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaa 195 (321)
T COG3458 116 DVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAA 195 (321)
T ss_pred ecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhh
Confidence 9999998843 111 11222334445555555443 4468999999999999999998
Q ss_pred hCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhh
Q 018750 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGI 226 (351)
Q Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (351)
..| +++++++.-|....+. . .+. ....-+...+..++......+...-+.+.
T Consensus 196 l~~-rik~~~~~~Pfl~df~---r-----------~i~-----------~~~~~~ydei~~y~k~h~~~e~~v~~TL~-- 247 (321)
T COG3458 196 LDP-RIKAVVADYPFLSDFP---R-----------AIE-----------LATEGPYDEIQTYFKRHDPKEAEVFETLS-- 247 (321)
T ss_pred cCh-hhhcccccccccccch---h-----------hee-----------ecccCcHHHHHHHHHhcCchHHHHHHHHh--
Confidence 876 7999998876532111 0 000 00001111122222221111111101111
Q ss_pred hhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Ccccccc
Q 018750 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~ 305 (351)
-.+......++++|+|+..|-.|+++||...-.+++++...++..+++- +|..
T Consensus 248 -----------------------yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~--- 301 (321)
T COG3458 248 -----------------------YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG--- 301 (321)
T ss_pred -----------------------hhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccccc---
Confidence 1123344567899999999999999999999999999866778888886 8853
Q ss_pred ChHHHHHHHHHHHHhc
Q 018750 306 RTEEVNQALIDLIKAS 321 (351)
Q Consensus 306 ~p~~~~~~i~~fl~~~ 321 (351)
-|.-..+.+..|++..
T Consensus 302 ~p~~~~~~~~~~l~~l 317 (321)
T COG3458 302 GPGFQSRQQVHFLKIL 317 (321)
T ss_pred CcchhHHHHHHHHHhh
Confidence 3444455566666543
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-12 Score=107.30 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=68.5
Q ss_pred CeEEEEEEcCC-CCCeEEEEecCCCCc---cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC----C
Q 018750 24 GIKIFYRTYGR-GPTKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----G 95 (351)
Q Consensus 24 g~~l~y~~~g~-~~p~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~----G 95 (351)
-+.+.|...+. .+..||||.|++... .....+++.|.. .+|.|+-+-++ |
T Consensus 20 ~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~----------------------~~wsl~q~~LsSSy~G 77 (303)
T PF08538_consen 20 LVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEE----------------------TGWSLFQVQLSSSYSG 77 (303)
T ss_dssp TEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-----------------------TT-EEEEE--GGGBTT
T ss_pred CeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhcc----------------------CCeEEEEEEecCccCC
Confidence 34555555443 344799999997654 345667777765 59999999875 4
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHh--------CCcceEEEEEchhhHHHHHHHHhCC-----cccceEEEeccCC
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL--------GWKQAHVFGHSMGAMIACKLAAMVP-----ERVLSLALLNVTG 162 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~--------~~~~v~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~ 162 (351)
+|.+ ++++.++||.++++.+ +.++|+|+|||.|+.-++.|+.... ..|+++|+-+|..
T Consensus 78 ~G~~---------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 78 WGTS---------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp S-S-----------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred cCcc---------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 4433 6777788888777654 2468999999999999999988752 5699999999975
Q ss_pred C
Q 018750 163 G 163 (351)
Q Consensus 163 ~ 163 (351)
.
T Consensus 149 D 149 (303)
T PF08538_consen 149 D 149 (303)
T ss_dssp -
T ss_pred C
Confidence 3
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.1e-12 Score=108.01 Aligned_cols=130 Identities=26% Similarity=0.375 Sum_probs=106.4
Q ss_pred CccccccCCeEEEEEEcCCC-----C--CeEEEEecCCCCccchHHHHHHhcCCCCC-CCCchhhhcccccCCCCCCCeE
Q 018750 16 PDAALNDNGIKIFYRTYGRG-----P--TKVILITGLAGTHDAWGPQLKGLAGTDKP-NDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~-----~--p~vv~~HG~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
+.-..++.|.++|+...... + -+||++|||+|+-..|-.+++.|.++-+. .+++ --|.
T Consensus 125 ~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d--------------~~FE 190 (469)
T KOG2565|consen 125 KQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESD--------------YAFE 190 (469)
T ss_pred hhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccc--------------eeEE
Confidence 33446778999999876532 1 25999999999999999999999875211 1111 2589
Q ss_pred EEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 88 vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
||++.+||+|.|+.+.. ..++....+..+..++-++|.+++.+-|..||+.|+..+|..+|++|.|+-+-.+
T Consensus 191 VI~PSlPGygwSd~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 191 VIAPSLPGYGWSDAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred EeccCCCCcccCcCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 99999999999998876 5778888999999999999999999999999999999999999999988765443
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-12 Score=101.29 Aligned_cols=255 Identities=16% Similarity=0.175 Sum_probs=146.7
Q ss_pred ccccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 17 DAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.+....||..+....+.. .+-.|++-.+.+.....|++++...++ +||.|+.+|+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~----------------------~Gf~Vlt~dy 65 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAK----------------------AGFEVLTFDY 65 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhc----------------------cCceEEEEec
Confidence 344555787776555542 222366666666667788999998888 8999999999
Q ss_pred CCCCCCCCCCC-CCccchHhHHH-HHHHHHHHhC----CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 018750 94 RGMGRSSVPVK-KTEYTTKIMAK-DVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 94 ~G~G~S~~~~~-~~~~~~~~~~~-dl~~~l~~~~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
||.|.|+.... ...++..|++. |+.+.++.++ ..+...||||+||.+.-.+.. ++ +..+........ +..
T Consensus 66 RG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~ga-gws- 141 (281)
T COG4757 66 RGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGA-GWS- 141 (281)
T ss_pred ccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEecccc-ccc-
Confidence 99999986542 24566667665 6666666554 358999999999987765554 44 444444433321 110
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC-chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
+. ................. .....+....-..+++.. ......+++|.+...... +.+.
T Consensus 142 -g~---m~~~~~l~~~~l~~lv~----p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~----y~fd-------- 201 (281)
T COG4757 142 -GW---MGLRERLGAVLLWNLVG----PPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPR----YYFD-------- 201 (281)
T ss_pred -cc---hhhhhcccceeeccccc----cchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcc----cccc--------
Confidence 00 00000000000000000 000001111111222221 233344455444332211 0000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceE--EEcC---C--CccccccCh-HHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARM--IDLP---G--GHLVSHERT-EEVNQALIDLI 318 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~--~~~~---g--gH~~~~~~p-~~~~~~i~~fl 318 (351)
..-.....+..+.+++|++.+...+|+.+|+...+.+.+.. .|+.+ +.++ + ||+....++ |.+.+.+.+|+
T Consensus 202 dp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 202 DPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred ChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 00112344677889999999999999999999999999865 66544 4442 3 899888887 88888888776
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4e-12 Score=112.22 Aligned_cols=282 Identities=18% Similarity=0.172 Sum_probs=156.0
Q ss_pred ccccccCCeEEEEEEc--C-CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 17 DAALNDNGIKIFYRTY--G-RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~--g-~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
..+.+.||.-+..... + ..+|+|++.||+.+++..|-... . ..+||-.|+++||+|+.-+.
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~---p-------------~~sLaf~LadaGYDVWLgN~ 114 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNG---P-------------EQSLAFLLADAGYDVWLGNN 114 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecC---c-------------cccHHHHHHHcCCceeeecC
Confidence 3455567775443332 2 45678999999999999884322 1 13445555558999999999
Q ss_pred CCCCCCCCC--------CCCCccchHhHHH-HHHHHHHH----hCCcceEEEEEchhhHHHHHHHHhCCc---ccceEEE
Q 018750 94 RGMGRSSVP--------VKKTEYTTKIMAK-DVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLAL 157 (351)
Q Consensus 94 ~G~G~S~~~--------~~~~~~~~~~~~~-dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl 157 (351)
||...|... ....++++.+++. ||-+.++. .+.++++.||||.|+.+....+...|+ +|+..++
T Consensus 115 RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~a 194 (403)
T KOG2624|consen 115 RGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIA 194 (403)
T ss_pred cCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeee
Confidence 997776532 1134567776554 66665554 467899999999999999999888765 7999999
Q ss_pred eccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCc-----------------------cccccHHHHHHhhcCCc-
Q 018750 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL-----------------------DTHYSQEYLEEYVGSST- 213 (351)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~- 213 (351)
++|+...- .......................... ........+....+...
T Consensus 195 LAP~~~~k-----~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~ 269 (403)
T KOG2624|consen 195 LAPAAFPK-----HIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSN 269 (403)
T ss_pred ecchhhhc-----ccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchH
Confidence 99975211 00000000000000000000000000 00000000000000000
Q ss_pred -----------------hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCC
Q 018750 214 -----------------RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (351)
Q Consensus 214 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~ 276 (351)
........|.+ +...+....+++....... .........-.+.++++|+.+.+|++|.++.
T Consensus 270 ~~n~~~~~~~~~h~pagtSvk~~~H~~Q-~~~s~~f~~yD~G~~~N~~-~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 270 NWNTTLLPVYLAHLPAGTSVKNIVHWAQ-IVRSGKFRKYDYGSKRNLK-HYGQSTPPEYDLTNIKVPTALYYGDNDWLAD 347 (403)
T ss_pred hhhhcccchhhccCCCCccHHHHHHHHH-HhcCCCccccCCCccccHh-hcCCCCCCCCCccccccCEEEEecCCcccCC
Confidence 00001111111 1112222222222221111 1111112223466779999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEE---cCC-Ccccc---ccChHHHHHHHHHHHHhcC
Q 018750 277 ICYARRLAEKLYPVARMID---LPG-GHLVS---HERTEEVNQALIDLIKASE 322 (351)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~---~~g-gH~~~---~~~p~~~~~~i~~fl~~~~ 322 (351)
++..+.+...+ +++.... ++. .|+-+ .+.++++.+.|.+.++...
T Consensus 348 ~~DV~~~~~~~-~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 348 PEDVLILLLVL-PNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHHHHhc-ccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 99999888876 4433322 677 89655 3578999999999998765
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.8e-13 Score=90.78 Aligned_cols=76 Identities=25% Similarity=0.401 Sum_probs=65.1
Q ss_pred CeEEEEEEcCCC---CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 24 GIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 24 g~~l~y~~~g~~---~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
|.+|+|..+.+. +.+|+++||++.++..|..+++.|++ +||.|+++|+||||.|+
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~----------------------~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAE----------------------QGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHh----------------------CCCEEEEECCCcCCCCC
Confidence 578888888753 34799999999999999999999999 79999999999999998
Q ss_pred CCCCCCccchHhHHHHHHHHHH
Q 018750 101 VPVKKTEYTTKIMAKDVIALMD 122 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~ 122 (351)
.... ..-+++++++|+..+++
T Consensus 59 g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 59 GKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred Cccc-ccCCHHHHHHHHHHHhC
Confidence 6443 34578999999998874
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.8e-11 Score=95.15 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=65.4
Q ss_pred EEEEecCCCCccchHH--HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 39 VILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 39 vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
|+++||+.++...... +.+.+.+.. ....+.++|++ .+.....+.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~--------------------~~~~~~~p~l~-------------~~p~~a~~~ 48 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHG--------------------PDIQYPCPDLP-------------PFPEEAIAQ 48 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhC--------------------CCceEECCCCC-------------cCHHHHHHH
Confidence 8999999998876543 334454410 13567777764 246777788
Q ss_pred HHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 117 l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+.++++....+.+.|||.||||..|..+|.+++ +++ |+++|+
T Consensus 49 l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPa 90 (187)
T PF05728_consen 49 LEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPA 90 (187)
T ss_pred HHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCC
Confidence 889999887777999999999999999999985 444 888986
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.8e-12 Score=108.07 Aligned_cols=254 Identities=12% Similarity=0.089 Sum_probs=141.2
Q ss_pred CCeEEEEecCCCCccch-----HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 36 PTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
++++|++|.+......| ..++..|.+ +|..|+.+++++-..+.......+|-.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~----------------------~g~~vfvIsw~nPd~~~~~~~~edYi~ 164 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLE----------------------QGLDVFVISWRNPDASLAAKNLEDYIL 164 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHH----------------------cCCceEEEeccCchHhhhhccHHHHHH
Confidence 34699999988776665 345556655 799999999998777765443233333
Q ss_pred HhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc-cceEEEeccCCCCCCCCCcc---chhhhHHHHhhcc--
Q 018750 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPKL---DLQTLSIAIRFFR-- 184 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~-- 184 (351)
+.+.+.+..+.+..|.+++.++|+|.||+++..++..++.+ |++++++.+........+.. +...+.....-..
T Consensus 165 e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~ 244 (445)
T COG3243 165 EGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQK 244 (445)
T ss_pred HHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhc
Confidence 44455566666777889999999999999999999988877 99999887654221111110 0100111000000
Q ss_pred cCCHH-----HHhhcCccccccHHHHHHhhcCCch---------------hhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 185 AKTPE-----KRAAVDLDTHYSQEYLEEYVGSSTR---------------RAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 185 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
...+. ..............+...+...... ......++++.+-.........
T Consensus 245 g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~-------- 316 (445)
T COG3243 245 GILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGG-------- 316 (445)
T ss_pred cCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccc--------
Confidence 00000 0011111111111222222222211 1111222222111111000000
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccC-hH----H----HHHHHH
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHER-TE----E----VNQALI 315 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~-p~----~----~~~~i~ 315 (351)
.......-.+.+|+||++++.|++|.++|.+......+.+...++++..++||...+-+ |. + .-..+.
T Consensus 317 ---~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~ 393 (445)
T COG3243 317 ---LEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAE 393 (445)
T ss_pred ---eEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHH
Confidence 00011123468899999999999999999999998888764447777777799765543 21 1 223567
Q ss_pred HHHHhcC
Q 018750 316 DLIKASE 322 (351)
Q Consensus 316 ~fl~~~~ 322 (351)
.|+....
T Consensus 394 ~Wl~~a~ 400 (445)
T COG3243 394 AWLSGAK 400 (445)
T ss_pred HHHHhhc
Confidence 7776544
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=8e-12 Score=98.66 Aligned_cols=192 Identities=20% Similarity=0.141 Sum_probs=124.9
Q ss_pred cccccCCeEEEEEEcCCCCCeEEEEecCCCCcc-chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC-C
Q 018750 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-G 95 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~-G 95 (351)
+..+++|..-++...-+.+..||++--+-|... .-+..+..++. .||.|+.+|+. |
T Consensus 21 ~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~----------------------~Gy~v~vPD~~~G 78 (242)
T KOG3043|consen 21 REEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVAL----------------------NGYTVLVPDFFRG 78 (242)
T ss_pred ceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhc----------------------CCcEEEcchhhcC
Confidence 344445555444333333335666666555443 35666777776 79999999975 3
Q ss_pred CCCCCCCCC------CCccchHhHHHHHHHHHHHh---C-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 96 MGRSSVPVK------KTEYTTKIMAKDVIALMDHL---G-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 96 ~G~S~~~~~------~~~~~~~~~~~dl~~~l~~~---~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
--.|..... ....+..-.-+++..+++.+ | .+++.++|.||||-++..+....| .+.+.+.+-|..
T Consensus 79 dp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~--- 154 (242)
T KOG3043|consen 79 DPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF--- 154 (242)
T ss_pred CCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc---
Confidence 111211000 01223344445555555544 4 468999999999999999988887 577777766541
Q ss_pred CCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
T Consensus 155 -------------------------------------------------------------------------------- 154 (242)
T KOG3043|consen 155 -------------------------------------------------------------------------------- 154 (242)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC----ceEEEcCC-Cccccc-----cCh------HH
Q 018750 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV----ARMIDLPG-GHLVSH-----ERT------EE 309 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~g-gH~~~~-----~~p------~~ 309 (351)
.....+..+++|||++.|+.|.++|++....+.+.+..+ .++.+++| +|.... +.| |+
T Consensus 155 ------~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~ee 228 (242)
T KOG3043|consen 155 ------VDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEE 228 (242)
T ss_pred ------CChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHH
Confidence 012455778899999999999999999998888877433 35889999 996553 233 56
Q ss_pred HHHHHHHHHHhc
Q 018750 310 VNQALIDLIKAS 321 (351)
Q Consensus 310 ~~~~i~~fl~~~ 321 (351)
..+.+.+|++..
T Consensus 229 a~~~~~~Wf~~y 240 (242)
T KOG3043|consen 229 AYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHh
Confidence 667777777653
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=8e-11 Score=113.04 Aligned_cols=209 Identities=18% Similarity=0.152 Sum_probs=129.7
Q ss_pred ccccCCeEEEE-EEc------CCCCCeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 19 ALNDNGIKIFY-RTY------GRGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 19 ~~~~~g~~l~y-~~~------g~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
+...||.+|.+ ..+ +...|+||++||..+.+. .|......|.. +||.|+
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~----------------------rG~~v~ 478 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD----------------------RGFVYA 478 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH----------------------CCcEEE
Confidence 44568988875 222 123588999999877663 46666667776 799999
Q ss_pred EecCCCCCCCCC---C---CCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 90 AFDNRGMGRSSV---P---VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 90 ~~D~~G~G~S~~---~---~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
.++.||-|.-.. . ......+++|+++.+..+++.- ..+++.+.|.|.||.++..++.++|++++++|...|.
T Consensus 479 ~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 479 IVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred EEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 999998654331 1 0112245666666666666542 2368999999999999999999999999999998876
Q ss_pred CCCCCCCCccchhhhHHHHhhcc-cCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 162 GGGFQCCPKLDLQTLSIAIRFFR-AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
... ..++. ...+ ........+ +.... .. ...++..
T Consensus 559 ~D~---------------~~~~~~~~~p-----------~~~~~~~e~-G~p~~-~~-~~~~l~~--------------- 594 (686)
T PRK10115 559 VDV---------------VTTMLDESIP-----------LTTGEFEEW-GNPQD-PQ-YYEYMKS--------------- 594 (686)
T ss_pred hhH---------------hhhcccCCCC-----------CChhHHHHh-CCCCC-HH-HHHHHHH---------------
Confidence 310 00000 0000 000011111 21111 10 1111111
Q ss_pred hhhhhcccCCHHHHHHhhccCcc-EEEEeecCCccCCHHHHHHHHHHhC---CCceEEEc---CC-Ccccc
Q 018750 241 IHACWMHKMTQKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKLY---PVARMIDL---PG-GHLVS 303 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~---~g-gH~~~ 303 (351)
......+.+++.| +|+++|.+|.-||+..+.++..++. ...+++++ ++ ||...
T Consensus 595 ----------~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 595 ----------YSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred ----------cCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 1223445667789 6677999999999999999988772 34566666 66 99843
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3e-11 Score=116.65 Aligned_cols=221 Identities=12% Similarity=0.048 Sum_probs=119.8
Q ss_pred CCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhC--------------------CcceEEEEEchhh
Q 018750 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--------------------WKQAHVFGHSMGA 138 (351)
Q Consensus 79 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~--------------------~~~v~lvG~S~Gg 138 (351)
+.++.+||.|+.+|.||+|.|++... .+. .+-.+|..++++.+. ..+|.++|.||||
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 44555899999999999999987642 111 334556555555553 3589999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHH-HHhhc--CCchh
Q 018750 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL-EEYVG--SSTRR 215 (351)
Q Consensus 139 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~ 215 (351)
.+++.+|...|+.++++|..++........ .. ...+.... ..... ......... ..... .....
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~y--------r~-~G~~~~~~--g~~ge--d~d~l~~~~~~r~~~~~~~~~~ 416 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYY--------RE-NGLVRAPG--GYQGE--DLDVLAELTYSRNLLAGDYLRH 416 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHh--------hc-CCceeccC--CcCCc--chhhHHHHhhhcccCcchhhcc
Confidence 999999999888899999987763211000 00 00000000 00000 000000000 00000 00000
Q ss_pred hhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCce
Q 018750 216 AILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVAR 292 (351)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~ 292 (351)
....+.....+.......... ...+|. ..+....+.++++|+|+|+|..|..+++..+.++.+.+. ...+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~----y~~fW~---~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkk 489 (767)
T PRK05371 417 NEACEKLLAELTAAQDRKTGD----YNDFWD---DRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKK 489 (767)
T ss_pred hHHHHHHHhhhhhhhhhcCCC----ccHHHH---hCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeE
Confidence 000011000000000000000 111121 123446678899999999999999999888877777663 2466
Q ss_pred EEEcCCCccccc-cChHHHHHHHHHHHHhcC
Q 018750 293 MIDLPGGHLVSH-ERTEEVNQALIDLIKASE 322 (351)
Q Consensus 293 ~~~~~ggH~~~~-~~p~~~~~~i~~fl~~~~ 322 (351)
+.+.+++|.... ..+.++.+.+.+|++...
T Consensus 490 L~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 490 LFLHQGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred EEEeCCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 766677996443 345667777777776653
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-11 Score=127.56 Aligned_cols=98 Identities=16% Similarity=0.103 Sum_probs=85.6
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
++++++||++++...|..+...|.. +++|++++.+|+|.+.. ..+++++++++
T Consensus 1069 ~~l~~lh~~~g~~~~~~~l~~~l~~-----------------------~~~v~~~~~~g~~~~~~----~~~~l~~la~~ 1121 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQFSVLSRYLDP-----------------------QWSIYGIQSPRPDGPMQ----TATSLDEVCEA 1121 (1296)
T ss_pred CCeEEecCCCCchHHHHHHHHhcCC-----------------------CCcEEEEECCCCCCCCC----CCCCHHHHHHH
Confidence 5699999999999999999999986 89999999999986632 35689999999
Q ss_pred HHHHHHHhCC-cceEEEEEchhhHHHHHHHHh---CCcccceEEEeccC
Q 018750 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVT 161 (351)
Q Consensus 117 l~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~ 161 (351)
+.+.++.+.. ++++++||||||.+|.++|.+ .++++..++++++.
T Consensus 1122 ~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999988654 589999999999999999986 47789999999875
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.4e-11 Score=98.58 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=85.2
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
|+|+++|+.+|....|.++...|.. ...|+.++.||.|.-... ..+++++++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-----------------------~~~v~~l~a~g~~~~~~~----~~~l~~~a~~ 53 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-----------------------LLPVYGLQAPGYGAGEQP----FASLDDMAAA 53 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-----------------------CceeeccccCcccccccc----cCCHHHHHHH
Confidence 4699999999999999999999997 699999999999864333 3489999998
Q ss_pred HHHHHHHhCC-cceEEEEEchhhHHHHHHHHhC---CcccceEEEeccCCC
Q 018750 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGG 163 (351)
Q Consensus 117 l~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~ 163 (351)
..+.|..... .+++|+|||+||.+|...|.+. .+.|..++++++...
T Consensus 54 yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 54 YVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 8888877754 5999999999999999998864 457999999998753
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.5e-11 Score=93.81 Aligned_cols=218 Identities=18% Similarity=0.261 Sum_probs=114.6
Q ss_pred CCeEEEEEEcCC------CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 23 ~g~~l~y~~~g~------~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
+|.+|+.++.-+ ..++||+.+|++..-..|..++.+|+. .||+|+.+|.-.|
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~----------------------NGFhViRyDsl~H 68 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSA----------------------NGFHVIRYDSLNH 68 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHT----------------------TT--EEEE---B-
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhh----------------------CCeEEEecccccc
Confidence 678898887653 236899999999999999999999999 7999999998876
Q ss_pred -CCCCCCCCCCccchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 97 -GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 97 -G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
|.|++.- ..+++....+++..+++.+ |..++.|+.-|+.|-+|+..|.+. .+.-+|..-+.. ..
T Consensus 69 vGlSsG~I--~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV--------nl 136 (294)
T PF02273_consen 69 VGLSSGDI--NEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV--------NL 136 (294)
T ss_dssp --------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S---------H
T ss_pred ccCCCCCh--hhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee--------eH
Confidence 8888766 4778888888888777665 777899999999999999999854 477777665431 01
Q ss_pred hhhhHHHH--hhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 173 LQTLSIAI--RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 173 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
...+.... .++............ +.+-......+...+.+ ..|. ..
T Consensus 137 r~TLe~al~~Dyl~~~i~~lp~dld------------feGh~l~~~vFv~dc~e------------------~~w~--~l 184 (294)
T PF02273_consen 137 RDTLEKALGYDYLQLPIEQLPEDLD------------FEGHNLGAEVFVTDCFE------------------HGWD--DL 184 (294)
T ss_dssp HHHHHHHHSS-GGGS-GGG--SEEE------------ETTEEEEHHHHHHHHHH------------------TT-S--SH
T ss_pred HHHHHHHhccchhhcchhhCCCccc------------ccccccchHHHHHHHHH------------------cCCc--cc
Confidence 11111110 011100000000000 00000001111111111 1111 12
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccCh
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERT 307 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p 307 (351)
......++.+.+|++.+++++|..|......++...+. +.+++..++| +|.+. |++
T Consensus 185 ~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 185 DSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp HHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred hhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 33456778889999999999999999999999888663 4578888899 99874 444
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-10 Score=89.09 Aligned_cols=134 Identities=14% Similarity=0.110 Sum_probs=95.8
Q ss_pred chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCH
Q 018750 109 TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
..+++++.+.+.+... .++++||+||+|+.+++.++.+....|.|+++++|+-.... .
T Consensus 42 ~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~-------~-------------- 99 (181)
T COG3545 42 VLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP-------E-------------- 99 (181)
T ss_pred CHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc-------c--------------
Confidence 6788888888888777 46799999999999999999988779999999998631100 0
Q ss_pred HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
..... ... +.. ........|.+++.
T Consensus 100 ---------------~~~~~--------------~~t-----------------------f~~---~p~~~lpfps~vva 124 (181)
T COG3545 100 ---------------IRPKH--------------LMT-----------------------FDP---IPREPLPFPSVVVA 124 (181)
T ss_pred ---------------cchhh--------------ccc-----------------------cCC---CccccCCCceeEEE
Confidence 00000 000 000 01123346999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccccc---cChHHHHHHHHHHHHhc
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH---ERTEEVNQALIDLIKAS 321 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~---~~p~~~~~~i~~fl~~~ 321 (351)
.++|++++++.++.+++.+ +..++.+.. ||..-. ....+....+.+|+.+.
T Consensus 125 SrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 125 SRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred ecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 9999999999999999986 566677664 997543 34567788888887654
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-10 Score=100.25 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=56.9
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEe
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~ 158 (351)
+||.|+..|.||.|.|+...... ..+-++|..++|+.+ .. .+|.++|.|++|..++.+|...|..+++++..
T Consensus 56 ~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~ 132 (272)
T PF02129_consen 56 RGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQ 132 (272)
T ss_dssp TT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEE
T ss_pred CCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEec
Confidence 79999999999999998765421 455566666666655 22 47999999999999999999888899999998
Q ss_pred ccCCCC
Q 018750 159 NVTGGG 164 (351)
Q Consensus 159 ~~~~~~ 164 (351)
.+....
T Consensus 133 ~~~~d~ 138 (272)
T PF02129_consen 133 SGWSDL 138 (272)
T ss_dssp SE-SBT
T ss_pred ccCCcc
Confidence 876543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.9e-10 Score=82.86 Aligned_cols=180 Identities=18% Similarity=0.174 Sum_probs=124.8
Q ss_pred CCeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC-----CCCCCCCCCCcc
Q 018750 36 PTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-----GRSSVPVKKTEY 108 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-----G~S~~~~~~~~~ 108 (351)
.-+||+.||.+.+-+ ....++..|+. +|+.|..++++-. |....++. ...
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~----------------------~G~~vaRfefpYma~Rrtg~rkPp~~-~~t 70 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALAR----------------------RGWLVARFEFPYMAARRTGRRKPPPG-SGT 70 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHh----------------------CceeEEEeecchhhhccccCCCCcCc-ccc
Confidence 337999999987765 45677788887 7999999998743 32222222 222
Q ss_pred chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCH
Q 018750 109 TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
-...+...+.++.+.+...++++-|+||||-++...+...-..|+++++++-+.- | ...+
T Consensus 71 ~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh-----p---------------pGKP 130 (213)
T COG3571 71 LNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH-----P---------------PGKP 130 (213)
T ss_pred CCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC-----C---------------CCCc
Confidence 3456777888888887767999999999999999998876556999999874310 0 0000
Q ss_pred HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
.....+.+..++.|+||.+
T Consensus 131 -------------------------------------------------------------e~~Rt~HL~gl~tPtli~q 149 (213)
T COG3571 131 -------------------------------------------------------------EQLRTEHLTGLKTPTLITQ 149 (213)
T ss_pred -------------------------------------------------------------ccchhhhccCCCCCeEEee
Confidence 0011245677889999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-Ccccccc----------ChHHHHHHHHHHHHhc
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE----------RTEEVNQALIDLIKAS 321 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~----------~p~~~~~~i~~fl~~~ 321 (351)
|+.|.+-..+...... +.+..+++++++ .|.+--. +-...++.|..|++..
T Consensus 150 GtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 150 GTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred cccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 9999998876664333 457889999987 7865322 2245667777777653
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.8e-10 Score=101.27 Aligned_cols=123 Identities=17% Similarity=0.188 Sum_probs=82.7
Q ss_pred CeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHH-----------HhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 018750 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLK-----------GLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 24 g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
+..++|+-.. ...|+||+++|.+|.+..+..+.+ .+...-.+++ +..+
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~----------------~~~~ 123 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN----------------NEAY 123 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc----------------cccC
Confidence 4566665544 245889999999998876543321 1111111122 2578
Q ss_pred EEEecCC-CCCCCCCCCCCCccchHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHhC----------C
Q 018750 88 VCAFDNR-GMGRSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV----------P 149 (351)
Q Consensus 88 vi~~D~~-G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~----------p 149 (351)
++.+|.| |+|.|.........+.++.++|+.++++.+ +..+++|+||||||.++..+|... .
T Consensus 124 ~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~ 203 (462)
T PTZ00472 124 VIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLY 203 (462)
T ss_pred eEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCce
Confidence 9999975 999887644323445678888988888743 447899999999999998877653 1
Q ss_pred cccceEEEeccCC
Q 018750 150 ERVLSLALLNVTG 162 (351)
Q Consensus 150 ~~v~~lvl~~~~~ 162 (351)
-.++++++-++..
T Consensus 204 inLkGi~IGNg~~ 216 (462)
T PTZ00472 204 INLAGLAVGNGLT 216 (462)
T ss_pred eeeEEEEEecccc
Confidence 2477888888754
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.4e-10 Score=94.14 Aligned_cols=235 Identities=15% Similarity=0.115 Sum_probs=127.3
Q ss_pred CCCeEEEEecCCCCccchH-HH-HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC--Cccch
Q 018750 35 GPTKVILITGLAGTHDAWG-PQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTT 110 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~ 110 (351)
.+|.+|.++|.|.+....+ .+ +..|.+ +|+..+.+..|-||.-.+.... ...++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~----------------------~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLK----------------------EGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHH----------------------cCcceEEEecccccccChhHhhcccccch
Confidence 4677788888887553322 22 455555 6999999999999987644321 11122
Q ss_pred HhH-------HHH---HHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh--hhHH
Q 018750 111 KIM-------AKD---VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ--TLSI 178 (351)
Q Consensus 111 ~~~-------~~d---l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~ 178 (351)
.|+ +.+ +...++..|..++.+.|.||||.+|...|...|..|..+-++++.............. .+..
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~ 228 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDA 228 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHH
Confidence 221 222 2233344477899999999999999999999998887777777653221111110000 0000
Q ss_pred HHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhh
Q 018750 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (351)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (351)
....+.................. ..... ........+..+..... .+....+.
T Consensus 229 L~~q~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~Ea~~~m~~~-------------------------md~~T~l~ 281 (348)
T PF09752_consen 229 LEKQFEDTVYEEEISDIPAQNKS-LPLDS-MEERRRDREALRFMRGV-------------------------MDSFTHLT 281 (348)
T ss_pred HHHHhcccchhhhhcccccCccc-ccchh-hccccchHHHHHHHHHH-------------------------HHhhcccc
Confidence 00000000000000000000000 00000 00000000000000000 01111112
Q ss_pred cc-----CccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCcc-ccccChHHHHHHHHHHHH
Q 018750 259 SA-----GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL-VSHERTEEVNQALIDLIK 319 (351)
Q Consensus 259 ~i-----~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~-~~~~~p~~~~~~i~~fl~ 319 (351)
+. .-.+.++.+++|.++|......+.+.+ |++++.+++|||. .++-+.+.+.+.|.+-++
T Consensus 282 nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W-PGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 282 NFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW-PGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred ccCCCCCCCcEEEEEecCceEechhhcchHHHhC-CCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 22 234889999999999998888999877 9999999999995 456788899999988764
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=96.29 Aligned_cols=170 Identities=18% Similarity=0.162 Sum_probs=90.7
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC-----CCCCC--------
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-----GRSSV-------- 101 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-----G~S~~-------- 101 (351)
.++.|||+||++.+...+......|.+.++. .++.++.+|-|-- |-...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~------------------~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~ 64 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKK------------------LDFEFVFVDGPHEVPPGPGIEPFSSEAESAF 64 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHH------------------TT-EEEEE--SEE---GGG-SS---HHHHHH
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhh------------------CcEEEEEecCCcccCCccccccccccccccc
Confidence 3567999999999999887766655541110 2688888885521 11100
Q ss_pred ----C------C---CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC--------CcccceEEEecc
Q 018750 102 ----P------V---KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--------PERVLSLALLNV 160 (351)
Q Consensus 102 ----~------~---~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~--------p~~v~~lvl~~~ 160 (351)
+ . ......+++..+.+.++++..|. -..|+|+|.||.+|..++... ...++-+|++++
T Consensus 65 ~~~~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg 143 (212)
T PF03959_consen 65 GDPGPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISG 143 (212)
T ss_dssp HHTT--EESS---S-SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES-
T ss_pred CCCCcceeeeecCCCcccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcc
Confidence 0 0 00122356666677777777652 356999999999999887542 124788888887
Q ss_pred CCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
..+.. .. .+
T Consensus 144 ~~p~~------~~---------------------------------------------~~-------------------- 152 (212)
T PF03959_consen 144 FPPPD------PD---------------------------------------------YQ-------------------- 152 (212)
T ss_dssp ---EE------E----------------------------------------------GT--------------------
T ss_pred cCCCc------hh---------------------------------------------hh--------------------
Confidence 63100 00 00
Q ss_pred hhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC-ceEEEcCCCccccccCh
Q 018750 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPGGHLVSHERT 307 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~ggH~~~~~~p 307 (351)
... .-..|++|+|.|+|++|.+++++..+.+.+.+ .+ .+++..++||.++....
T Consensus 153 -----------~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~gGH~vP~~~~ 207 (212)
T PF03959_consen 153 -----------ELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMF-DPDARVIEHDGGHHVPRKKE 207 (212)
T ss_dssp -----------TTT---TT---EEEEEEETT-SSS-HHHHHHHHHHH-HHHEEEEEESSSSS----HH
T ss_pred -----------hhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhc-cCCcEEEEECCCCcCcCChh
Confidence 000 12456799999999999999999999999987 55 78888899998876543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.4e-09 Score=86.63 Aligned_cols=206 Identities=19% Similarity=0.220 Sum_probs=115.7
Q ss_pred CeEEEEecCCCCccchHHHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC----CCCCC----C-----
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSSV----P----- 102 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~----G~S~~----~----- 102 (351)
.|.||+||++++...+..++..+. +...+ ...-++.++.-|. |.=.. |
T Consensus 12 tPTifihG~~gt~~s~~~mi~~~~~~~~~~------------------~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~ 73 (255)
T PF06028_consen 12 TPTIFIHGYGGTANSFNHMINRLENKQGVA------------------QKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVN 73 (255)
T ss_dssp EEEEEE--TTGGCCCCHHHHHHHHHCSTS-------------------S-EEEEEEETTSEEEEES---TT-SS-EEEEE
T ss_pred CcEEEECCCCCChhHHHHHHHHHHhhcCCC------------------ceEEEEEECCCCeEEEeeecCCCCCCCEEEEE
Confidence 369999999999999999999997 52111 1222344444442 22111 0
Q ss_pred -CCCCccchHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCc-----ccceEEEeccCCCCCCCCCccc
Q 018750 103 -VKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 103 -~~~~~~~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
.+....+....++.+..++..| +++++-+|||||||..++.|+..+.. ++.++|.++++..+........
T Consensus 74 F~~n~~~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~ 153 (255)
T PF06028_consen 74 FEDNRNANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ 153 (255)
T ss_dssp ESSTT-CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T
T ss_pred ecCCCcCCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc
Confidence 0111136777888888877766 66899999999999999999988532 5899999998753321111000
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
. .. .+.. -+ .......++.+.....
T Consensus 154 ~--~~----~~~~-----------------------~g-p~~~~~~y~~l~~~~~------------------------- 178 (255)
T PF06028_consen 154 N--QN----DLNK-----------------------NG-PKSMTPMYQDLLKNRR------------------------- 178 (255)
T ss_dssp T--TT-----CST-----------------------T--BSS--HHHHHHHHTHG-------------------------
T ss_pred h--hh----hhcc-----------------------cC-CcccCHHHHHHHHHHH-------------------------
Confidence 0 00 0000 00 0000111111111000
Q ss_pred HHHHhhccCccEEEEeec------CCccCCHHHHHHHHHHhCC---CceEEEcCC---CccccccChHHHHHHHHHHHH
Q 018750 253 DIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYP---VARMIDLPG---GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~------~D~~~~~~~~~~~~~~~~~---~~~~~~~~g---gH~~~~~~p~~~~~~i~~fl~ 319 (351)
..+ .-++.||-|.|. .|..||...+..+..-+.+ ..+-.++.| .|.-..|++ +|.+.|.+||-
T Consensus 179 --~~~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 179 --KNF-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp --GGS-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred --hhC-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 001 113579999998 8999999888877765533 234445544 588877777 88899999984
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.4e-10 Score=85.68 Aligned_cols=201 Identities=18% Similarity=0.178 Sum_probs=116.7
Q ss_pred EEEEEEcCC--CCCeEEEEecCC---C-CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC
Q 018750 26 KIFYRTYGR--GPTKVILITGLA---G-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (351)
Q Consensus 26 ~l~y~~~g~--~~p~vv~~HG~~---~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 99 (351)
+-....+|+ ..+.+||+||.- + .......+-..+. +||+|..+++ +.+
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~-----------------------~gY~vasvgY---~l~ 108 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVR-----------------------RGYRVASVGY---NLC 108 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhh-----------------------cCeEEEEecc---CcC
Confidence 333444553 557899999962 2 2223333333333 5999999854 455
Q ss_pred CCCCCCCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHh-CCcccceEEEeccCCCCCCCCCccchhhhH
Q 018750 100 SVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (351)
..... ..-++.+...-+.-+++.... +.+.+-|||.|+.+|.++..+ +..+|.+++++++...
T Consensus 109 ~q~ht-L~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~-------------- 173 (270)
T KOG4627|consen 109 PQVHT-LEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD-------------- 173 (270)
T ss_pred ccccc-HHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh--------------
Confidence 32211 112344444444445555443 456677999999999987655 4568999999987520
Q ss_pred HHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh
Q 018750 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (351)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (351)
+.+..+.... ...++...- .......+..+
T Consensus 174 ---------------------------l~EL~~te~g------------------~dlgLt~~~-----ae~~Scdl~~~ 203 (270)
T KOG4627|consen 174 ---------------------------LRELSNTESG------------------NDLGLTERN-----AESVSCDLWEY 203 (270)
T ss_pred ---------------------------HHHHhCCccc------------------cccCcccch-----hhhcCccHHHh
Confidence 0000000000 000000000 00111233556
Q ss_pred hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccCh----HHHHHHHHHHH
Q 018750 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT----EEVNQALIDLI 318 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p----~~~~~~i~~fl 318 (351)
..++.|+|++.|++|.---.+..+.+..++ ..+++..+++ +|+-.+++. ..+...+.+|+
T Consensus 204 ~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 204 TDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred cCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 788899999999999877778888888887 7789999999 998776643 33444444443
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-09 Score=90.59 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=76.3
Q ss_pred EEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 018750 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (351)
Q Consensus 27 l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 106 (351)
++|-.....=|+|||+||+......|..+++.++. .||-|+++|+...+...... .
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAS----------------------hGyIVV~~d~~~~~~~~~~~--~ 63 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVAS----------------------HGYIVVAPDLYSIGGPDDTD--E 63 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHh----------------------CceEEEEecccccCCCCcch--h
Confidence 34433333458899999999877789999999999 69999999976544321111 1
Q ss_pred ccchHhHHHHHHHHHH-Hh------CCcceEEEEEchhhHHHHHHHHhC-----CcccceEEEeccCC
Q 018750 107 EYTTKIMAKDVIALMD-HL------GWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTG 162 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~-~~------~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 162 (351)
..+..+.++.+.+=++ .+ +..++.|.|||-||-+|..++..+ +.+++++++++|..
T Consensus 64 ~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 64 VASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 1122222222222111 11 335799999999999999999887 56899999999873
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.7e-10 Score=86.19 Aligned_cols=95 Identities=25% Similarity=0.308 Sum_probs=74.1
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (351)
.+||+-|=+|-...=..+.+.|++ +|+.|+.+|-+-+=.+.+ +.++.+.|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~----------------------~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl 54 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAK----------------------QGVPVVGVDSLRYFWSER-------TPEQTAADL 54 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHH----------------------CCCeEEEechHHHHhhhC-------CHHHHHHHH
Confidence 478888877765555677788888 899999999876655532 556677777
Q ss_pred HHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccC
Q 018750 118 IALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (351)
Q Consensus 118 ~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~ 161 (351)
..+++.+ +.++++|+|+|+|+-+.-....+.|. +|..++++++.
T Consensus 55 ~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 55 ARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 7777654 67899999999999988888877764 68999999976
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-09 Score=88.79 Aligned_cols=97 Identities=19% Similarity=0.189 Sum_probs=60.9
Q ss_pred EEEEecCCC---CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 39 VILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 39 vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
||++||.+. +......++..+++. .|+.|+.+|+|=..... ....++|..+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~ 54 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE---------------------RGFVVVSIDYRLAPEAP-----FPAALEDVKA 54 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH---------------------HTSEEEEEE---TTTSS-----TTHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh---------------------ccEEEEEeecccccccc-----cccccccccc
Confidence 799999864 334445556666531 49999999999432211 1223444444
Q ss_pred HHHHHHHH-----hCCcceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccC
Q 018750 116 DVIALMDH-----LGWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (351)
Q Consensus 116 dl~~~l~~-----~~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~ 161 (351)
.+..++++ .+.++++|+|+|.||.+++.++....+ .++++++++|.
T Consensus 55 a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 55 AYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 44445554 334689999999999999999876433 38999999974
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-09 Score=82.78 Aligned_cols=60 Identities=27% Similarity=0.440 Sum_probs=48.3
Q ss_pred hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+++|.|.|.|+.|.+++...++.+++.+ ++..++.-+|||.++-.. ...+.|.+||..
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecCCCccCCCch--HHHHHHHHHHHH
Confidence 567899999999999999999999999986 888888888999987665 344445555543
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=90.73 Aligned_cols=110 Identities=16% Similarity=0.181 Sum_probs=69.9
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccc-hHhHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT-TKIMAK 115 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~ 115 (351)
.+|||+||.+|+...++.+...+.+. .........++++++|+......-... ...+ .+-..+
T Consensus 5 ~pVlFIhG~~Gs~~q~rsl~~~~~~~--------------~~~~~~~~~~d~ft~df~~~~s~~~g~--~l~~q~~~~~~ 68 (225)
T PF07819_consen 5 IPVLFIHGNAGSYKQVRSLASELQRK--------------ALLNDNSSHFDFFTVDFNEELSAFHGR--TLQRQAEFLAE 68 (225)
T ss_pred CEEEEECcCCCCHhHHHHHHHHHhhh--------------hhhccCccceeEEEeccCccccccccc--cHHHHHHHHHH
Confidence 35999999999988887777666320 000111146899999987543221111 0111 122333
Q ss_pred HHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCC
Q 018750 116 DVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTG 162 (351)
Q Consensus 116 dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 162 (351)
.+..+++.+ +.+++++|||||||.+|-.++...+ +.|+.+|.++++.
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 444444444 4578999999999999988876543 4799999999874
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-08 Score=98.91 Aligned_cols=221 Identities=17% Similarity=0.175 Sum_probs=139.6
Q ss_pred cccccCCeEEEEEEcCC-------CCCeEEEEecCCCCccch----HHHHH-HhcCCCCCCCCchhhhcccccCCCCCCC
Q 018750 18 AALNDNGIKIFYRTYGR-------GPTKVILITGLAGTHDAW----GPQLK-GLAGTDKPNDDDETILQDSVESGDGGAG 85 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-------~~p~vv~~HG~~~~~~~~----~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g 85 (351)
..+..+|...++...-+ .-|.||.+||.+++.... ..+.. .... .|
T Consensus 501 ~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~----------------------~g 558 (755)
T KOG2100|consen 501 GKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSS----------------------RG 558 (755)
T ss_pred EEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhcc----------------------CC
Confidence 34555888888776543 236788899998733211 11222 2333 69
Q ss_pred eEEEEecCCCCCCCCCC------CCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceE-E
Q 018750 86 IEVCAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL-A 156 (351)
Q Consensus 86 ~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l-v 156 (351)
+.|+.+|.||-|..... .......++|+...+..+++.. +.+++.++|+|+||.+++..+...|+.+-++ +
T Consensus 559 ~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgv 638 (755)
T KOG2100|consen 559 FAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGV 638 (755)
T ss_pred eEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEE
Confidence 99999999998765432 1223456777777777777655 3468999999999999999999998555554 8
Q ss_pred EeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCC
Q 018750 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (351)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (351)
.++|... .. .+..-+.+++++........+++
T Consensus 639 avaPVtd---------~~------------------------~yds~~terymg~p~~~~~~y~e--------------- 670 (755)
T KOG2100|consen 639 AVAPVTD---------WL------------------------YYDSTYTERYMGLPSENDKGYEE--------------- 670 (755)
T ss_pred Eecceee---------ee------------------------eecccccHhhcCCCccccchhhh---------------
Confidence 8888631 00 00000111111111111100000
Q ss_pred cchhhhhhhcccCCHHHHHHhhccCccE-EEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccC-hHHH
Q 018750 237 FDGQIHACWMHKMTQKDIQTIRSAGFLV-SVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHER-TEEV 310 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-lii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~-p~~~ 310 (351)
......+..++.|. |++||+.|.-++.+.+..+.+.|. -..++.++|+ +|.+..-. -..+
T Consensus 671 --------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~ 736 (755)
T KOG2100|consen 671 --------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHL 736 (755)
T ss_pred --------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHH
Confidence 01112334444555 999999999999999988888772 1378889998 99887644 3678
Q ss_pred HHHHHHHHHhcC
Q 018750 311 NQALIDLIKASE 322 (351)
Q Consensus 311 ~~~i~~fl~~~~ 322 (351)
...+..|+..+-
T Consensus 737 ~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 737 YEKLDRFLRDCF 748 (755)
T ss_pred HHHHHHHHHHHc
Confidence 899999998554
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.7e-09 Score=82.82 Aligned_cols=258 Identities=13% Similarity=0.117 Sum_probs=139.7
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC---CC----CCCC
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS---VP----VKKT 106 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~---~~----~~~~ 106 (351)
..++.+++++|.+|....|..+...|..... +...++.+-..||-.-. .. ....
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~-------------------~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e 87 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLI-------------------DRLPVWTISHAGHALMPASLREDHSHTNEE 87 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcc-------------------cccceeEEeccccccCCccccccccccccc
Confidence 3556789999999999999999988876211 13568888888876533 11 1125
Q ss_pred ccchHhHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCCCCCCCCCccchhhhHHHHhh
Q 018750 107 EYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (351)
.++++++++.-.++++..- ..+++++|||.|+++.++..... .-.|.+++++-|..-.....|.- ..+......
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG--~~~t~~l~~ 165 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNG--IRLTKVLRY 165 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCc--eEeeeeeee
Confidence 6789999998889988763 25899999999999999987743 23588888887753111100000 000000000
Q ss_pred cccCCHH-HHhhcCccccccHHHHHHhh-cCCchhhhhHHHHHhhhhhccCCCCCCcch-hhhhhhcccCCHHHHHHhhc
Q 018750 183 FRAKTPE-KRAAVDLDTHYSQEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDG-QIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 183 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 259 (351)
+...... ..........+.+..+-++. .......+............-..+...+.. .+.. ......+.+++
T Consensus 166 ~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~e-----V~~~d~e~~ee 240 (301)
T KOG3975|consen 166 LPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEE-----VTTRDIEYCEE 240 (301)
T ss_pred ehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHH-----HHHhHHHHHHh
Confidence 0000000 00000000001111111111 111111111111000000000000000000 0000 01122344455
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEc-CC-CccccccChHHHHHHHHHHH
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL-PG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
-.+-+.+..|.+|..+|.+..+.+.+.+ |..++..- +. .|.+...+.+..+..+.+.+
T Consensus 241 n~d~l~Fyygt~DgW~p~~~~d~~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 241 NLDSLWFYYGTNDGWVPSHYYDYYKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred cCcEEEEEccCCCCCcchHHHHHHhhhc-chhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 4567899999999999999999999987 65554443 45 89998999988888888765
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.9e-09 Score=85.65 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=69.1
Q ss_pred CCCeEEEEecCCCCccchHHH--HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC------C-CCC
Q 018750 35 GPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV------P-VKK 105 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~------~-~~~ 105 (351)
+.|.||++||.+.+...+... +..+++. .||-|+.++......... . ...
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~---------------------~GfivvyP~~~~~~~~~~cw~w~~~~~~~ 73 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADR---------------------EGFIVVYPEQSRRANPQGCWNWFSDDQQR 73 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhc---------------------CCeEEEcccccccCCCCCccccccccccc
Confidence 347899999999988765432 2345542 589999998542111100 0 000
Q ss_pred CccchHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 106 TEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
..-+...+..-+..+....++ ++|++.|+|.||+.+..++..+|+.+.++..+++..
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 011122222333334444444 589999999999999999999999999999888764
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=97.46 Aligned_cols=103 Identities=20% Similarity=0.252 Sum_probs=59.2
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC-CCC-C----------
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVP-V---------- 103 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S-~~~-~---------- 103 (351)
-|+|||-||++++...|..++..|+. +||-|+++|+|-.-.+ ... .
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS----------------------~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~ 157 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELAS----------------------HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPY 157 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHH----------------------TT-EEEEE---SS-SSEEEE-SSHHHHHHT--
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHh----------------------CCeEEEEeccCCCceeEEEeccCCCccccccc
Confidence 47899999999999999999999999 7999999999943111 000 0
Q ss_pred -----C-----CCc------cc-----hHhHHHHHHHHHHHh--------------------------CCcceEEEEEch
Q 018750 104 -----K-----KTE------YT-----TKIMAKDVIALMDHL--------------------------GWKQAHVFGHSM 136 (351)
Q Consensus 104 -----~-----~~~------~~-----~~~~~~dl~~~l~~~--------------------------~~~~v~lvG~S~ 136 (351)
. ... +. ++.-++++..+++.+ +.+++.++|||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSF 237 (379)
T PF03403_consen 158 VVEYLEEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSF 237 (379)
T ss_dssp -------EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETH
T ss_pred cccccccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCc
Confidence 0 000 00 111122333333222 134689999999
Q ss_pred hhHHHHHHHHhCCcccceEEEeccC
Q 018750 137 GAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 137 Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
||..++..+... .++++.|++++.
T Consensus 238 GGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 238 GGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp HHHHHHHHHHH--TT--EEEEES--
T ss_pred hHHHHHHHHhhc-cCcceEEEeCCc
Confidence 999999988876 579999999974
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.4e-08 Score=74.75 Aligned_cols=51 Identities=12% Similarity=-0.031 Sum_probs=37.5
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCc-eEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
..+++..+.|.+.+...+.+.. .++ ++++.+| .|-+ +.-++....|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y----~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEEL----HPYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHh----ccCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 3699999999999976665444 334 6788888 5643 566778888999985
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-08 Score=84.44 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=71.4
Q ss_pred EEecCC--CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHH
Q 018750 41 LITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (351)
Q Consensus 41 ~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (351)
++|+.+ ++...|..+...|.. ++.|+++|.+|++.+.... .+++++++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~ 54 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-----------------------RRDVSALPLPGFGPGEPLP----ASADALVEAQA 54 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-----------------------CccEEEecCCCCCCCCCCC----CCHHHHHHHHH
Confidence 455544 566778999998887 7999999999998765433 25677776655
Q ss_pred HHHHH-hCCcceEEEEEchhhHHHHHHHHh---CCcccceEEEeccCC
Q 018750 119 ALMDH-LGWKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (351)
Q Consensus 119 ~~l~~-~~~~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 162 (351)
..+.. .+..+++++|||+||.++...+.+ .++.+.+++++++..
T Consensus 55 ~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 55 EAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 54443 345789999999999999988886 356789999888753
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.1e-09 Score=94.54 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=72.3
Q ss_pred CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC
Q 018750 47 GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW 126 (351)
Q Consensus 47 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~ 126 (351)
.....|..+++.|.+ .||.+ ..|++|+|.+.+.........+++.+.+.++.+..+.
T Consensus 105 ~~~~~~~~li~~L~~----------------------~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~ 161 (440)
T PLN02733 105 DEVYYFHDMIEQLIK----------------------WGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG 161 (440)
T ss_pred chHHHHHHHHHHHHH----------------------cCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC
Confidence 445789999999998 68755 8999999998765321122344555555555566677
Q ss_pred cceEEEEEchhhHHHHHHHHhCCcc----cceEEEeccCCCCC
Q 018750 127 KQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGF 165 (351)
Q Consensus 127 ~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~ 165 (351)
++++|+||||||.++..++..+|+. |+++|.++++..+.
T Consensus 162 ~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 8999999999999999999988864 78999998875543
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.7e-07 Score=81.09 Aligned_cols=101 Identities=20% Similarity=0.126 Sum_probs=67.3
Q ss_pred CCCeEEEEecCCC---CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
+.|+||++||.+. +......++..+... .|+.|+.+|+|-.-+-. ....++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~---------------------~g~~vv~vdYrlaPe~~-----~p~~~~ 131 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAA---------------------AGAVVVSVDYRLAPEHP-----FPAALE 131 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHH---------------------cCCEEEecCCCCCCCCC-----CCchHH
Confidence 3578999999863 333443444444331 69999999998444332 233455
Q ss_pred hHHHHHHHHHHH---hC--CcceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccC
Q 018750 112 IMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (351)
Q Consensus 112 ~~~~dl~~~l~~---~~--~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~ 161 (351)
|..+.+..+.++ ++ .+++.++|+|.||.+++.++..-.+ .....+++.|.
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 544444444444 33 4679999999999999998876543 46788888875
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.2e-08 Score=86.78 Aligned_cols=116 Identities=22% Similarity=0.218 Sum_probs=60.2
Q ss_pred CeEEEEecCCCCccchHHHH---HHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC---Cccch
Q 018750 37 TKVILITGLAGTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTT 110 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~ 110 (351)
|.||++||-++..+...... +.+.+ +---+..-.+..|+.+||-|+++|.+|+|+....... ..++.
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~-------~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~ 188 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKD-------DYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDC 188 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG---------STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--H
T ss_pred CEEEEeCCCCCCcccccCCcccccccch-------hhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhH
Confidence 68999999876643211100 11111 0000122245566679999999999999987643321 11111
Q ss_pred Hh---------------HHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 111 KI---------------MAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 111 ~~---------------~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
.. .+-|....++.+ ..++|.++|+||||..++.+|+.. ++|+..|..+-
T Consensus 189 ~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 189 QALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11 122333344444 235799999999999999999986 58988887664
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.5e-07 Score=79.51 Aligned_cols=104 Identities=15% Similarity=0.061 Sum_probs=75.1
Q ss_pred CCCeEEEEecCCC-----CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccc
Q 018750 35 GPTKVILITGLAG-----THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (351)
Q Consensus 35 ~~p~vv~~HG~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (351)
..|.||++||.|. ....|..+...++.. .+.-|+++|+|=--+... ...
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~---------------------~~~vvvSVdYRLAPEh~~-----Pa~ 142 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE---------------------LNCVVVSVDYRLAPEHPF-----PAA 142 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHH---------------------cCeEEEecCcccCCCCCC-----Ccc
Confidence 3478999999863 245678888888652 478899999984433332 335
Q ss_pred hHhHHHHHHHHHHH----h--CCcceEEEEEchhhHHHHHHHHhC------CcccceEEEeccCCCC
Q 018750 110 TKIMAKDVIALMDH----L--GWKQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTGGG 164 (351)
Q Consensus 110 ~~~~~~dl~~~l~~----~--~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~ 164 (351)
.+|-.+.+..+.++ . +.++++|+|-|.||.+|..+|.+. +.++++.|++-|...+
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 66666666666664 2 446899999999999999888753 3569999999987533
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.1e-08 Score=87.51 Aligned_cols=205 Identities=18% Similarity=0.201 Sum_probs=131.7
Q ss_pred CCCeEEEEecCCCCccchHHH-------HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC-----
Q 018750 35 GPTKVILITGLAGTHDAWGPQ-------LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP----- 102 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~----- 102 (351)
.-|+++++-|.++-......+ ...|+. .||-|+.+|-||.-.....
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Las----------------------lGy~Vv~IDnRGS~hRGlkFE~~i 698 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLAS----------------------LGYVVVFIDNRGSAHRGLKFESHI 698 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhh----------------------cceEEEEEcCCCccccchhhHHHH
Confidence 447999999988644322211 234444 7999999999986544321
Q ss_pred -CCCCccchHhHHHHHHHHHHHhC---CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHH
Q 018750 103 -VKKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (351)
Q Consensus 103 -~~~~~~~~~~~~~dl~~~l~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (351)
..-....++|.++-+.-+.+..| .++|.+-|||+||.+++....++|+-++..|.-+|.. .+.
T Consensus 699 k~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT---------~W~---- 765 (867)
T KOG2281|consen 699 KKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT---------DWR---- 765 (867)
T ss_pred hhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce---------eee----
Confidence 11235578999999999999875 3689999999999999999999998777666555431 110
Q ss_pred HHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhh
Q 018750 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (351)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (351)
.+...+.+++++-......-+ . ........+.+.
T Consensus 766 --------------------~YDTgYTERYMg~P~~nE~gY------------------~--------agSV~~~Veklp 799 (867)
T KOG2281|consen 766 --------------------LYDTGYTERYMGYPDNNEHGY------------------G--------AGSVAGHVEKLP 799 (867)
T ss_pred --------------------eecccchhhhcCCCccchhcc------------------c--------chhHHHHHhhCC
Confidence 111112222222221111000 0 001112223444
Q ss_pred ccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-cChHHHHHHHHHHHHh
Q 018750 259 SAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTEEVNQALIDLIKA 320 (351)
Q Consensus 259 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-~~p~~~~~~i~~fl~~ 320 (351)
.-....+++||--|.-|.......+...+ .+.-++.++|. -|.+-. |.-+-....+..||.+
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 44456899999999999988888887766 34568999998 897754 3445667778888864
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-07 Score=75.06 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=108.3
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC--------CC------C
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS--------SV------P 102 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S--------~~------~ 102 (351)
.+||++||.+.+...|..++..|.- +....|++.-|-.--+ .. .
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l----------------------~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~ 61 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPL----------------------PNIKWICPTAPSRPVTLNGGAFMNAWFDIMELS 61 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCC----------------------CCeeEEcCCCCCCcccccCCCcccceecceeeC
Confidence 4799999999999999888877654 3555555543311100 00 0
Q ss_pred C--CCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 103 V--KKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 103 ~--~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
. ....-++...++.+..++++. |+ .++.+-|.||||++++..+..+|..+.+++-..+..+. ..
T Consensus 62 ~~~~~d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~------~~--- 132 (206)
T KOG2112|consen 62 SDAPEDEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPR------AS--- 132 (206)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccccc------ch---
Confidence 0 001223445555666666654 33 46889999999999999999998888888777654210 00
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
..+... . .
T Consensus 133 ---------------------------~~~~~~----------------------------------------~-----~ 140 (206)
T KOG2112|consen 133 ---------------------------IGLPGW----------------------------------------L-----P 140 (206)
T ss_pred ---------------------------hhccCC----------------------------------------c-----c
Confidence 000000 0 0
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccChHHHHHHHH
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
..+ ..|++..||+.|+++|....+...+.+ ...++++.++| +|...-+.-+++...|.
T Consensus 141 ~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 141 GVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred ccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 000 469999999999999987666655544 23477888899 99776555444444443
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-07 Score=75.86 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=65.5
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEE-EEecCCCCCCCCCCCCCCccchHhH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV-CAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-i~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
++..|||+.|||.+...+..+. +.. ++.| +++|+| ..+.+.
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~-----------------------~~D~l~~yDYr------------~l~~d~- 51 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPE-----------------------NYDVLICYDYR------------DLDFDF- 51 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCC-----------------------CccEEEEecCc------------cccccc-
Confidence 4458999999999987665542 122 5554 667776 111110
Q ss_pred HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhc
Q 018750 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (351)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (351)
| ..+.+.+.|||+|||-++|..+.... .++..|.+++.+.+....-.++..........+
T Consensus 52 --~------~~~y~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~~Pid~~~GIpp~iF~~Tl~~l 111 (213)
T PF04301_consen 52 --D------LSGYREIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTPYPIDDEYGIPPAIFAGTLENL 111 (213)
T ss_pred --c------cccCceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCCCCcCCCCCCCHHHHHHHHHhC
Confidence 1 12457899999999999998886654 378888899887655555555555444443333
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.5e-07 Score=79.61 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=53.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEec
Q 018750 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (351)
|+.|+.+.+. .. +. ...+++|......++++.+ +..+.+|+|-|.||+.++.+|+.+|+.+.-+|+-+
T Consensus 100 GHPvYFV~F~----p~-P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 100 GHPVYFVGFF----PE-PE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred CCCeEEEEec----CC-CC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 9999888764 11 11 2447888888777777765 22489999999999999999999999888777766
Q ss_pred cC
Q 018750 160 VT 161 (351)
Q Consensus 160 ~~ 161 (351)
++
T Consensus 173 aP 174 (581)
T PF11339_consen 173 AP 174 (581)
T ss_pred CC
Confidence 54
|
Their function is unknown. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.6e-09 Score=83.81 Aligned_cols=88 Identities=24% Similarity=0.252 Sum_probs=53.8
Q ss_pred eEEEEecCCC-CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE---EEEecCCCCCCCCCCCC--CCccchH
Q 018750 38 KVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVK--KTEYTTK 111 (351)
Q Consensus 38 ~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~--~~~~~~~ 111 (351)
||||+||.++ ....|..+.+.|.+ +||. |+++++-....+..... ...-+..
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~----------------------~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~ 60 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKA----------------------AGYCDSEVYALTYGSGNGSPSVQNAHMSCESAK 60 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHH----------------------TT--CCCEEEE--S-CCHHTHHHHHHB-HHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHH----------------------cCCCcceeEeccCCCCCCCCcccccccchhhHH
Confidence 4999999998 55789999999998 7998 89999853333221110 0011223
Q ss_pred hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC
Q 018750 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
++.+-|.+++++.|. +|.||||||||.++-.+..-.
T Consensus 61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 444455555566688 999999999999999888644
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.8e-08 Score=81.73 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHh-CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 113 MAKDVIALMDHL-GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 113 ~~~dl~~~l~~~-~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
+.+...+++... .+ ++|.|+|.|.||-+|+.+|..+| .|+++|.++|...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344444555443 22 58999999999999999999999 7999999998753
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.3e-09 Score=89.81 Aligned_cols=112 Identities=21% Similarity=0.363 Sum_probs=65.4
Q ss_pred CCCeEEEEecCCCCc--cch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITGLAGTH--DAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~--~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
.+|++|++|||.++. ..| ..+...+.+.. ..+++||++|+...-.. ..........
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~-------------------~~d~NVI~VDWs~~a~~--~Y~~a~~n~~ 128 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKD-------------------TGDYNVIVVDWSRGASN--NYPQAVANTR 128 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC---------------------S-EEEEEEE-HHHHSS---HHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhc-------------------cCCceEEEEcchhhccc--cccchhhhHH
Confidence 568999999998877 344 44455554410 02799999999522111 0000011223
Q ss_pred hHHHHHHHHHHH----hC--CcceEEEEEchhhHHHHHHHHhCCc--ccceEEEeccCCCCCCC
Q 018750 112 IMAKDVIALMDH----LG--WKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQC 167 (351)
Q Consensus 112 ~~~~dl~~~l~~----~~--~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~ 167 (351)
...+.+..++.. .+ .++++|||||+||.+|-.++..... +|..++.++|+.+.+..
T Consensus 129 ~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~ 192 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFEN 192 (331)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTT
T ss_pred HHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccC
Confidence 333344444433 33 4689999999999999999998877 89999999999866543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-07 Score=76.93 Aligned_cols=209 Identities=17% Similarity=0.193 Sum_probs=113.2
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHH--------HHHH------HhCCcceEEEEEchhhHHHHHHHHhCC
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI--------ALMD------HLGWKQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~--------~~l~------~~~~~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
++...+.++-|-+|....+.. ..+.-+.+.|+. ++.. ..|..++.++|-||||.+|......++
T Consensus 140 ~~i~tmvle~pfYgqr~p~~q--~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q 217 (371)
T KOG1551|consen 140 REIATMVLEKPFYGQRVPEEQ--IIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQ 217 (371)
T ss_pred hcchheeeecccccccCCHHH--HHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCC
Confidence 689999999999998875542 222222233322 2221 235678999999999999999999887
Q ss_pred cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhc
Q 018750 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT 229 (351)
Q Consensus 150 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (351)
..|.-+-++++..........+.......+.++.....-....... ....+....-............+.+.+
T Consensus 218 ~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~----p~Q~~~~~~~~~srn~~~E~~~~Mr~v--- 290 (371)
T KOG1551|consen 218 KPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRN----PAQSYHLLSKEQSRNSRKESLIFMRGV--- 290 (371)
T ss_pred CCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhC----chhhHHHHHHHhhhcchHHHHHHHHHH---
Confidence 7777666666543221111111111111111111111000000000 000111000000000000011111110
Q ss_pred cCCCCCCcchhhhhhhcccCCHHHHHHhhccCcc-----EEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCcc-cc
Q 018750 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL-----VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL-VS 303 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~-~~ 303 (351)
.+....+....+| +.++.+++|..+|......+.+.+ |++++..++|||. .+
T Consensus 291 ---------------------md~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~egGHVsay 348 (371)
T KOG1551|consen 291 ---------------------MDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLEGGHVSAY 348 (371)
T ss_pred ---------------------HHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC-CCCEEEEeecCceeee
Confidence 0111122222233 677889999999998888888876 9999999999995 45
Q ss_pred ccChHHHHHHHHHHHHhcCC
Q 018750 304 HERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 304 ~~~p~~~~~~i~~fl~~~~~ 323 (351)
+-+-+.+.+.|.+-|++..+
T Consensus 349 l~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 349 LFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred ehhchHHHHHHHHHHHhhhh
Confidence 66889999999999987654
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.5e-07 Score=81.13 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=42.8
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHh---C-CCceEEEcCC-Cccccc-cChHHHHHHHHHHHH
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---Y-PVARMIDLPG-GHLVSH-ERTEEVNQALIDLIK 319 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~g-gH~~~~-~~p~~~~~~i~~fl~ 319 (351)
.+.|+++.+|..|.++|....+.+.+++ . .+.+++.+++ +|.... .......++|.+-|+
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFA 283 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHC
Confidence 4789999999999999999988888776 2 2466777787 897543 233444455555444
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.2e-08 Score=79.06 Aligned_cols=121 Identities=15% Similarity=0.077 Sum_probs=70.6
Q ss_pred CCeEEEEEEcCC-------CC-CeEEEEecCCCCcc-chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 23 NGIKIFYRTYGR-------GP-TKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 23 ~g~~l~y~~~g~-------~~-p~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.|.+|.|+-+-+ .- |.|||+||.+.... .+..+...+.. ++-..-+-++-|+++.+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~ga---------------iawa~pedqcfVlAPQy 234 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGA---------------IAWAGPEDQCFVLAPQY 234 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccc---------------eeeecccCceEEEcccc
Confidence 467787776643 22 78999999987654 33333322211 11111112445555552
Q ss_pred C-CCCCCCCCCCCCccchHhHHHHHH-HHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 94 R-GMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 94 ~-G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
- =+..++... ..-....++-+. .+.++.++ .++.++|.|+||+-++.++.++|+.+.+.+++++.
T Consensus 235 ~~if~d~e~~t---~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 235 NPIFADSEEKT---LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccccccccccc---chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 1 112222211 111223333333 23334444 47999999999999999999999999999999975
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.7e-09 Score=90.19 Aligned_cols=92 Identities=26% Similarity=0.246 Sum_probs=64.0
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC--CCCCCCCCC----Cccc
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM--GRSSVPVKK----TEYT 109 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~--G~S~~~~~~----~~~~ 109 (351)
-|.||+-||.++....|..+.+.+++ .||-|.++|++|- |........ ...-
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs----------------------~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~ 128 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLAS----------------------YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAE 128 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhh----------------------CceEEEeccCCCcccccCChhhcCCcccchhh
Confidence 47899999999999999999999998 7999999999984 333221110 1111
Q ss_pred hHhHHHHHHHHHHHh-------------CCcceEEEEEchhhHHHHHHHHhCC
Q 018750 110 TKIMAKDVIALMDHL-------------GWKQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~-------------~~~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
+.+-..|+..+++.+ ...+|.++|||+||..++..+....
T Consensus 129 ~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 129 WWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred hhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 223334444444322 2357999999999999999876554
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.1e-08 Score=83.41 Aligned_cols=101 Identities=23% Similarity=0.277 Sum_probs=70.7
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
+|+..|+|+-|..|--+. .-+...+. .||.|+.+++||++.|...+. .......
T Consensus 241 ngq~LvIC~EGNAGFYEv-G~m~tP~~-----------------------lgYsvLGwNhPGFagSTG~P~--p~n~~nA 294 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEV-GVMNTPAQ-----------------------LGYSVLGWNHPGFAGSTGLPY--PVNTLNA 294 (517)
T ss_pred CCceEEEEecCCccceEe-eeecChHH-----------------------hCceeeccCCCCccccCCCCC--cccchHH
Confidence 355568888887765442 11222233 499999999999999987653 2222333
Q ss_pred HHHHH-HHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 114 AKDVI-ALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 114 ~~dl~-~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
++.+. -.+..+|. +.+++.|||.||..++.+|..||+ |+++|+-++.
T Consensus 295 ~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 295 ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 33333 34556654 579999999999999999999997 9999987764
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.65 E-value=9.1e-08 Score=77.88 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=71.8
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCc-cchHhHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE-YTTKIMA 114 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~ 114 (351)
-|+|+|+||+.-....|..++..++. .||-|+++++-..-. +..... -+....+
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIAS----------------------HGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~ 100 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIAS----------------------HGFIVVAPQLYTLFP---PDGQDEIKSAASVI 100 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhh----------------------cCeEEEechhhcccC---CCchHHHHHHHHHH
Confidence 37899999999998899999999999 699999999864211 111000 1122222
Q ss_pred HHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHhCC--cccceEEEeccCC
Q 018750 115 KDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTG 162 (351)
Q Consensus 115 ~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 162 (351)
+++..-+..+ +..++.++|||.||-.|..+|..+. -.+++||.++|..
T Consensus 101 ~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 101 NWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 2332222222 2357999999999999999998773 3488999999874
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.8e-06 Score=76.30 Aligned_cols=123 Identities=16% Similarity=0.182 Sum_probs=77.9
Q ss_pred CeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHHH------------hcCCCCCCCCchhhhcccccCCCCCCCe
Q 018750 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKG------------LAGTDKPNDDDETILQDSVESGDGGAGI 86 (351)
Q Consensus 24 g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~~------------l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (351)
+..++|+-.. +.+|.||.+.|.+|++..+..+.+. |..+-.+++ +..
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~----------------~~a 86 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN----------------KFA 86 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG----------------GTS
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc----------------ccc
Confidence 6778776554 2568899999999998887544321 111111111 257
Q ss_pred EEEEecCC-CCCCCCCCCCC-CccchHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHh----C-----
Q 018750 87 EVCAFDNR-GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V----- 148 (351)
Q Consensus 87 ~vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~----~----- 148 (351)
+++.+|.| |.|.|...... ...+.++.++++..+|..+ ...+++|.|.|+||..+-.+|.. .
T Consensus 87 n~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~ 166 (415)
T PF00450_consen 87 NLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQ 166 (415)
T ss_dssp EEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--S
T ss_pred ceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccc
Confidence 89999955 99999866542 2346788888888887754 43589999999999987766653 2
Q ss_pred -CcccceEEEeccCC
Q 018750 149 -PERVLSLALLNVTG 162 (351)
Q Consensus 149 -p~~v~~lvl~~~~~ 162 (351)
+-.++|+++.++..
T Consensus 167 ~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 167 PKINLKGIAIGNGWI 181 (415)
T ss_dssp TTSEEEEEEEESE-S
T ss_pred cccccccceecCccc
Confidence 23488999988763
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.8e-07 Score=74.51 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=65.7
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
++..+||+||+..+.+.-..-...+...+. ....++.+.||..|.-..... ...+...-.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~-------------------~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~ 76 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLG-------------------FPGVVILFSWPSDGSLLGYFY-DRESARFSG 76 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhC-------------------CCceEEEEEcCCCCChhhhhh-hhhhHHHHH
Confidence 455899999999875432222222222100 122899999998876322111 111333344
Q ss_pred HHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhC----C-----cccceEEEeccC
Q 018750 115 KDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV----P-----ERVLSLALLNVT 161 (351)
Q Consensus 115 ~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~----p-----~~v~~lvl~~~~ 161 (351)
..+..+++.+ +.++|+|++||||+.+.+.+.... + .++..+|+++|-
T Consensus 77 ~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 77 PALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred HHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 4555555543 567999999999999999876542 1 257889998864
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1e-06 Score=73.59 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=68.1
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC----CC--C----
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV----PV--K---- 104 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~----~~--~---- 104 (351)
+-|.|||-||++++...|..+.-.|+. .||-|.++++|-+-.+-. +. .
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAS----------------------hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lv 174 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLAS----------------------HGFVVAAVEHRDRSACWTYVLKEKHENEPLV 174 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhh----------------------CceEEEEeecccCcceeEEEecccccCCccc
Confidence 347899999999999999999999998 799999999986544321 00 0
Q ss_pred ------------CCccc-----hHhHHHHHH---HHHHH------------------------hCCcceEEEEEchhhHH
Q 018750 105 ------------KTEYT-----TKIMAKDVI---ALMDH------------------------LGWKQAHVFGHSMGAMI 140 (351)
Q Consensus 105 ------------~~~~~-----~~~~~~dl~---~~l~~------------------------~~~~~v~lvG~S~Gg~~ 140 (351)
...+. +..-++... .+++. +...++.++|||+||+.
T Consensus 175 eq~~~ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT 254 (399)
T KOG3847|consen 175 EQWIKIRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGAT 254 (399)
T ss_pred ccceEeeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchh
Confidence 00000 111111111 12221 12235889999999999
Q ss_pred HHHHHHhCCcccceEEEecc
Q 018750 141 ACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 141 a~~~a~~~p~~v~~lvl~~~ 160 (351)
++.....+. .+++.|++++
T Consensus 255 ~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 255 SIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred hhhhhcccc-ceeeeeeeee
Confidence 998877664 5888888775
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.7e-05 Score=67.20 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=65.9
Q ss_pred CeEEEEecCC--CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 37 TKVILITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 37 p~vv~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
.+||+.||++ .+...+..+.+.+.+. .++.+..+. -|-+. ... ....+.+.+
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~---------------------~~~pg~~v~-ig~~~---~~s-~~~~~~~Qv 80 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINH---------------------SGYPGTCVE-IGNGV---QDS-LFMPLRQQA 80 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhC---------------------CCCCeEEEE-ECCCc---ccc-cccCHHHHH
Confidence 3599999999 4445666666666420 144444443 22221 111 112334444
Q ss_pred HHHHHHHHH---hCCcceEEEEEchhhHHHHHHHHhCCc--ccceEEEeccCCCCCCCCC
Q 018750 115 KDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 115 ~dl~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~ 169 (351)
+.+.+.+.. +. +-+++||+|.||.++-.++++.|+ .|+.+|.++++..|....|
T Consensus 81 ~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p 139 (306)
T PLN02606 81 SIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIP 139 (306)
T ss_pred HHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCc
Confidence 444433332 22 349999999999999999999876 5999999999876654444
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.5e-06 Score=78.56 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=51.5
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccC---------hHH----HHHHHHHHHHhc
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHER---------TEE----VNQALIDLIKAS 321 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~---------p~~----~~~~i~~fl~~~ 321 (351)
.+-.++.|||++.|.+|..+++...+++.+++....+++++++ +|.+-... ..+ +.++|.+|+...
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~~ 378 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIA 378 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 3445668999999999999999999999999878889999998 99765432 234 455566665544
Q ss_pred C
Q 018750 322 E 322 (351)
Q Consensus 322 ~ 322 (351)
.
T Consensus 379 l 379 (784)
T KOG3253|consen 379 L 379 (784)
T ss_pred h
Confidence 3
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.2e-06 Score=69.82 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=49.5
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH----
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK---- 111 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~---- 111 (351)
...|||+||+.|+...|..+...+.... ..+.--.+...++...... ...+++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~--------------------~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~ 60 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIP--------------------EDLPNARIVVLGYSNNEFK---TFDGIDVCGE 60 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhh--------------------hhcchhhhhhhcccccccc---cchhhHHHHH
Confidence 3479999999999988877776665410 0111111111111111111 112333
Q ss_pred hHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHH
Q 018750 112 IMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAA 146 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~ 146 (351)
.+++.|.+.++.... .++.+|||||||.++-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 444455555544443 48999999999999876554
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-06 Score=69.75 Aligned_cols=123 Identities=24% Similarity=0.286 Sum_probs=83.1
Q ss_pred ccccCCeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHH--HHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 19 ALNDNGIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
.+..+|.+..|+.+- .++|.||++||..++...+.... +.|+++ .||-|+.+
T Consensus 39 s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~---------------------~gFlV~yP 97 (312)
T COG3509 39 SFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR---------------------EGFLVAYP 97 (312)
T ss_pred ccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc---------------------cCcEEECc
Confidence 345566666665543 35578999999999887665544 566652 59999999
Q ss_pred cCC-------CCCCCCCCCC--CCccchHhHHHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 92 DNR-------GMGRSSVPVK--KTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 92 D~~-------G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
|-- +++.+..+.. ...-+...+.+-+..++...+++ +|++.|.|-||.++..++..+|+.+.++.++++
T Consensus 98 dg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg 177 (312)
T COG3509 98 DGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAG 177 (312)
T ss_pred CccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeec
Confidence 632 2233322221 11123344444455555566665 799999999999999999999999999999887
Q ss_pred CC
Q 018750 161 TG 162 (351)
Q Consensus 161 ~~ 162 (351)
..
T Consensus 178 ~~ 179 (312)
T COG3509 178 LL 179 (312)
T ss_pred cc
Confidence 64
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.8e-06 Score=72.40 Aligned_cols=105 Identities=22% Similarity=0.305 Sum_probs=73.8
Q ss_pred cccccCCeEEEEEEcC----CCCCeEEEEecCCCCccch------HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 018750 18 AALNDNGIKIFYRTYG----RGPTKVILITGLAGTHDAW------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g----~~~p~vv~~HG~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
-.+..|+..|-..... +....||++-|.++.-+.. ...+..+++. .+-+
T Consensus 115 v~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~---------------------~~aN 173 (365)
T PF05677_consen 115 VPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE---------------------LGAN 173 (365)
T ss_pred EEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH---------------------cCCc
Confidence 3455577776544443 2334799999988766551 1233344331 3789
Q ss_pred EEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh-----CC--cceEEEEEchhhHHHHHHHHhC
Q 018750 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 88 vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
|+.+++||.|.|.+.. +.++++.|-.+.++.+ |+ +++++.|||+||.++.+++..+
T Consensus 174 vl~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 174 VLVFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred EEEECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 9999999999998765 4578888777776665 22 5799999999999999877665
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=9e-07 Score=78.01 Aligned_cols=102 Identities=25% Similarity=0.293 Sum_probs=81.5
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE---EEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
++|++||++.+...|..+...+.. .|+. ++.++.++..... + .....+.+.
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~----------------------~g~~~~~~~~~~~~~~~~~~-~---~~~~~~ql~ 114 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAI----------------------LGWLTNGVYAFELSGGDGTY-S---LAVRGEQLF 114 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcc----------------------hHHHhcccccccccccCCCc-c---ccccHHHHH
Confidence 699999998888888888877776 5777 8888888661111 1 233566777
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC--cccceEEEeccCCCCC
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGGF 165 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~~ 165 (351)
..+.+++...+.+++.++||||||.++..++...+ .+|+.++.++++..+.
T Consensus 115 ~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 115 AYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred HHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 77888888888899999999999999999998887 7899999999876543
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.5e-05 Score=64.19 Aligned_cols=106 Identities=15% Similarity=0.164 Sum_probs=66.7
Q ss_pred eEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 38 ~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
++|+.||+|.+... ...+.+.+.+. .|..+.++.. |.+. ... ....+.+.++
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~---------------------~g~~~~~i~i---g~~~-~~s-~~~~~~~Qve 80 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNL---------------------SGSPGFCLEI---GNGV-GDS-WLMPLTQQAE 80 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhC---------------------CCCceEEEEE---CCCc-ccc-ceeCHHHHHH
Confidence 59999999876543 33333333220 2566666654 3331 111 2224445555
Q ss_pred HHHHHHHH---hCCcceEEEEEchhhHHHHHHHHhCCc--ccceEEEeccCCCCCCCCCc
Q 018750 116 DVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 116 dl~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~ 170 (351)
.+.+.+.. +. +-+++||+|.||.++-.++++.|+ .|+.+|.++++..+....|.
T Consensus 81 ~vce~l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~p~ 139 (314)
T PLN02633 81 IACEKVKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSLPR 139 (314)
T ss_pred HHHHHHhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCCCC
Confidence 44444433 22 349999999999999999999986 59999999998766544443
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.1e-05 Score=71.26 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=41.6
Q ss_pred HhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 111 KIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 111 ~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+.+++++.-.++.. +.++.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 44556666666653 2356899999999999999999999999999999975
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.7e-05 Score=64.17 Aligned_cols=60 Identities=10% Similarity=0.004 Sum_probs=48.4
Q ss_pred ccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-Ccccccc-ChHHHHHHHHHHH
Q 018750 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHE-RTEEVNQALIDLI 318 (351)
Q Consensus 259 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl 318 (351)
..++|-|+|+++.|.+++.+..++.++... -.++...+++ .|..++. +|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 345899999999999999998888876552 2356667777 8988765 8999999999884
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.3e-05 Score=65.49 Aligned_cols=103 Identities=19% Similarity=0.203 Sum_probs=66.1
Q ss_pred CeEEEEecCCCCcc---chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC--CC----------
Q 018750 37 TKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS--SV---------- 101 (351)
Q Consensus 37 p~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S--~~---------- 101 (351)
-.||++||.+.+.+ ...++...|.+ .|+.++++.+|.--.. ..
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~----------------------~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~ 145 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPD----------------------HGWATLSITLPDPAPPASPNRATEAEEVPS 145 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhh----------------------cCceEEEecCCCcccccCCccCCCCCCCCC
Confidence 37999999998874 23455566665 7999999998861100 00
Q ss_pred ----CCCCC--c---------cch----HhHHHHHHHH---HHHhCCcceEEEEEchhhHHHHHHHHhCCc-ccceEEEe
Q 018750 102 ----PVKKT--E---------YTT----KIMAKDVIAL---MDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALL 158 (351)
Q Consensus 102 ----~~~~~--~---------~~~----~~~~~dl~~~---l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~ 158 (351)
..... . -.. +.+..-|.+. +...+.++++|+||+.|+..++.+....+. .++++|++
T Consensus 146 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I 225 (310)
T PF12048_consen 146 AGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLI 225 (310)
T ss_pred CCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEE
Confidence 00000 0 001 1222223333 333455669999999999999999988764 58999999
Q ss_pred ccC
Q 018750 159 NVT 161 (351)
Q Consensus 159 ~~~ 161 (351)
++.
T Consensus 226 ~a~ 228 (310)
T PF12048_consen 226 NAY 228 (310)
T ss_pred eCC
Confidence 975
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.8e-05 Score=61.92 Aligned_cols=99 Identities=16% Similarity=0.106 Sum_probs=72.2
Q ss_pred CeEEEEecCCCCcc---chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 37 TKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 37 p~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
-.|||+-|++..-. .-.++...|.+ .+|.++-+.++.+- ......++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde----------------------~~wslVq~q~~Ssy-----~G~Gt~slk~D 89 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDE----------------------NSWSLVQPQLRSSY-----NGYGTFSLKDD 89 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhh----------------------ccceeeeeeccccc-----ccccccccccc
Confidence 35888988876543 23455666666 69999999886221 11134478889
Q ss_pred HHHHHHHHHHhCC----cceEEEEEchhhHHHHHHHHh--CCcccceEEEeccCC
Q 018750 114 AKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (351)
Q Consensus 114 ~~dl~~~l~~~~~----~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 162 (351)
++|+..++++++. ..|+|+|||.|+.=.+.|... .|..+...|+.+|..
T Consensus 90 ~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 90 VEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred HHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 9999999998854 379999999999988888733 355688888888764
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.8e-05 Score=72.71 Aligned_cols=128 Identities=20% Similarity=0.166 Sum_probs=80.8
Q ss_pred ccccCCeEEEEEEcCC----CCCeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 19 ALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
+..-||++|+-..+-+ ..|+++..+-++-.... +......+.. ...++++||.|+..|
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~----------------~~~~aa~GYavV~qD 87 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQ----------------PAWFAAQGYAVVNQD 87 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccc----------------cceeecCceEEEEec
Confidence 4455899998655532 34677777723322221 1111100000 013455899999999
Q ss_pred CCCCCCCCCCCCCCccc-hHhHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 93 NRGMGRSSVPVKKTEYT-TKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~-~~~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
.||.|.|+..-. ..++ -.+...|+.+.+.... ..+|..+|.|++|...+.+|...|..++.++..++...
T Consensus 88 vRG~~~SeG~~~-~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 88 VRGRGGSEGVFD-PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccccccCCcccc-eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 999999997654 1222 1222334444444432 35899999999999999999999888999998887654
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.2e-06 Score=66.29 Aligned_cols=107 Identities=21% Similarity=0.154 Sum_probs=73.9
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC----CCCCCCCC---------
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSSVPVK--------- 104 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~----G~S~~~~~--------- 104 (351)
+.||+||.+|+......++..|...+++-+ .--++.+|--|- |.=+....
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~-----------------e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe 109 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGT-----------------ESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFE 109 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccc-----------------cceEEEEcCCCcEEEeeeecccCCCCeEEEEEe
Confidence 589999999999999999999987443221 234556665551 11111100
Q ss_pred CCccchHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCc-----ccceEEEeccC
Q 018750 105 KTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (351)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~ 161 (351)
....+..++...+..++..| +++++.+|||||||.-...|+..+.. .++++|.++++
T Consensus 110 ~n~~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 110 DNTASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred cCcCchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 12334566677777666655 67889999999999999999987632 48999999876
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00051 Score=62.66 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.0
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-ceEEEcCC-CccccccChHHHHHHHH
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
.++||+..|..|.+++.-..+.+.+.+. .+ .+++.+.+ ||++. .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5799999999999999888888776652 01 23455666 99996 69999999999
Q ss_pred HHHHh
Q 018750 316 DLIKA 320 (351)
Q Consensus 316 ~fl~~ 320 (351)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00073 Score=61.69 Aligned_cols=59 Identities=19% Similarity=0.285 Sum_probs=47.1
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-ceEEEcCC-CccccccChHHHHHHHH
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
.++||+..|..|.+++.-..+.+.+.+. .+ .+++.+.+ ||+.. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5799999999999999887777776652 11 34455666 99996 69999999999
Q ss_pred HHHHh
Q 018750 316 DLIKA 320 (351)
Q Consensus 316 ~fl~~ 320 (351)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=7.5e-05 Score=64.76 Aligned_cols=68 Identities=18% Similarity=0.305 Sum_probs=52.2
Q ss_pred HHHhhccC-ccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCC-CccccccChH---HHHHHHHHHHHhc
Q 018750 254 IQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTE---EVNQALIDLIKAS 321 (351)
Q Consensus 254 ~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~~~p~---~~~~~i~~fl~~~ 321 (351)
...+..+. +|+|+++|.+|.++|...+..+.+.... ..+...+++ +|........ +..+.+.+|+.+.
T Consensus 224 ~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 224 FDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 34455555 7999999999999999999999987644 456777776 8987764433 7888888888764
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.4e-05 Score=57.39 Aligned_cols=61 Identities=28% Similarity=0.391 Sum_probs=54.4
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
..|+|+|.++.|+++|.+.++.+.+.+ ++++++.+++ ||..+...-..+.+.+.+||....
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 489999999999999999999999998 8899999999 998876555788999999998654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00013 Score=55.63 Aligned_cols=87 Identities=13% Similarity=0.223 Sum_probs=61.2
Q ss_pred EEEEecCCCCccchHHHH--HHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 39 VILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 39 vv~~HG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
||++|||.+|........ +.+.. ..+.+.+--| . ...++...++.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-----------------------~~~~i~y~~p-------~---l~h~p~~a~~e 48 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-----------------------DVRDIEYSTP-------H---LPHDPQQALKE 48 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-----------------------cccceeeecC-------C---CCCCHHHHHHH
Confidence 899999999887765433 33333 2222222211 1 13368889999
Q ss_pred HHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 117 l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+..++...+.+...|+|-|+||..|..++.++. +++ |+++|.
T Consensus 49 le~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPa 90 (191)
T COG3150 49 LEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPA 90 (191)
T ss_pred HHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCC
Confidence 999999998777999999999999999999874 444 445665
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.4e-05 Score=66.37 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHh-CCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 112 IMAKDVIALMDHL-GWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 112 ~~~~dl~~~l~~~-~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
-+.++|...++.. ... +..|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3445677666654 322 2799999999999999999999999999999975
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.01 E-value=5.2e-05 Score=71.14 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=70.5
Q ss_pred CCeEEEEEEcCC----------CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 23 NGIKIFYRTYGR----------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 23 ~g~~l~y~~~g~----------~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
+.+.++.+..|. +.-+|+|++|..|+-..-+.++......+..-..| -=.+......|+.+++|
T Consensus 66 ~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e------~t~~~d~~~~~DFFaVD 139 (973)
T KOG3724|consen 66 DKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFE------KTEDRDNPFSFDFFAVD 139 (973)
T ss_pred CceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchh------hhhcccCccccceEEEc
Confidence 456666555542 12259999999998776665554433100000000 00122233567888888
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHh-----C--------CcceEEEEEchhhHHHHHHHHh---CCcccceEE
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----G--------WKQAHVFGHSMGAMIACKLAAM---VPERVLSLA 156 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~--------~~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~lv 156 (351)
+-+ .-.-....++.++++-+.+.++.+ + ...|++|||||||.+|...+.. .++.|.-++
T Consensus 140 FnE-----e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntII 214 (973)
T KOG3724|consen 140 FNE-----EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTII 214 (973)
T ss_pred ccc-----hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhh
Confidence 742 000011224555555555544432 2 1239999999999999877653 244566677
Q ss_pred EeccCC
Q 018750 157 LLNVTG 162 (351)
Q Consensus 157 l~~~~~ 162 (351)
.++++.
T Consensus 215 TlssPH 220 (973)
T KOG3724|consen 215 TLSSPH 220 (973)
T ss_pred hhcCcc
Confidence 776653
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00033 Score=61.07 Aligned_cols=84 Identities=23% Similarity=0.227 Sum_probs=63.2
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (351)
.-||+.|=|+-.+.=..+.+.|.+ +|+.|+-+|-.-+=.|.+ +.++.++|+
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~----------------------~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl 312 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQK----------------------QGVPVVGVDSLRYFWSER-------TPEQIAADL 312 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHH----------------------CCCceeeeehhhhhhccC-------CHHHHHHHH
Confidence 457777777655555667778877 899999999765555532 567778888
Q ss_pred HHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCc
Q 018750 118 IALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 118 ~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
..+++.+ +.+++.|+|+|+|+-+.-....+.|.
T Consensus 313 ~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 313 SRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 8777655 66799999999999988777666654
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=6.1e-05 Score=59.55 Aligned_cols=106 Identities=23% Similarity=0.293 Sum_probs=66.9
Q ss_pred CCeEEEEecCCCCccchH--HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC--CCC---CCCCCCCC----
Q 018750 36 PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN--RGM---GRSSVPVK---- 104 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--~G~---G~S~~~~~---- 104 (351)
-|++.++.|+..+.+.+. .-+...+.. .|+.|+++|. ||. |.++..+-
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~---------------------hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASK---------------------HGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhh---------------------cCeEEECCCCCCCccccCCCcccccccCCc
Confidence 478999999999887662 222222221 5899999995 343 22221100
Q ss_pred -----------CCccchHh-HHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 105 -----------KTEYTTKI-MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 105 -----------~~~~~~~~-~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
...|.+-+ .++.+.+++... ...++.+.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 01122222 233444555421 22468899999999999999999999999988888764
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.8e-05 Score=68.69 Aligned_cols=78 Identities=19% Similarity=0.118 Sum_probs=57.5
Q ss_pred CeEEEEecCCCCCCCCCCCC-----CCccchHhHHHHHHHHHHHhC-------CcceEEEEEchhhHHHHHHHHhCCccc
Q 018750 85 GIEVCAFDNRGMGRSSVPVK-----KTEYTTKIMAKDVIALMDHLG-------WKQAHVFGHSMGAMIACKLAAMVPERV 152 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~~~-------~~~v~lvG~S~Gg~~a~~~a~~~p~~v 152 (351)
|--++++++|-+|.|.+... ....+.++..+|+..|++++. ..|++++|.|+||++|..+-.+||+.|
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~ 138 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLF 138 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCee
Confidence 67899999999999975432 234578899999999887763 137999999999999999999999999
Q ss_pred ceEEEeccCC
Q 018750 153 LSLALLNVTG 162 (351)
Q Consensus 153 ~~lvl~~~~~ 162 (351)
.+.+.-+++.
T Consensus 139 ~ga~ASSapv 148 (434)
T PF05577_consen 139 DGAWASSAPV 148 (434)
T ss_dssp SEEEEET--C
T ss_pred EEEEecccee
Confidence 9999888765
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.95 E-value=7e-05 Score=67.60 Aligned_cols=112 Identities=17% Similarity=0.257 Sum_probs=68.3
Q ss_pred cccCCeEEEEEEcCCCCCeEEEEe-cCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE------EEEec
Q 018750 20 LNDNGIKIFYRTYGRGPTKVILIT-GLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE------VCAFD 92 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~~~p~vv~~H-G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~------vi~~D 92 (351)
....|+.+.+...|... .|-.+- ........|..+++.|.+ .||. ..-+|
T Consensus 35 ~~~~gv~i~~~~~g~~~-~i~~ld~~~~~~~~~~~~li~~L~~----------------------~GY~~~~~l~~~pYD 91 (389)
T PF02450_consen 35 SNDPGVEIRVPGFGGTS-GIEYLDPSFITGYWYFAKLIENLEK----------------------LGYDRGKDLFAAPYD 91 (389)
T ss_pred ecCCCceeecCCCCcee-eeeecccccccccchHHHHHHHHHh----------------------cCcccCCEEEEEeec
Confidence 33456666665555211 122221 221222278899999987 3443 23378
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCc------ccceEEEeccCCC
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE------RVLSLALLNVTGG 163 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~ 163 (351)
+|---. ..+++...+.+.++.. ..++|+||||||||.++..+....+. .|+++|.++++..
T Consensus 92 WR~~~~----------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 92 WRLSPA----------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred hhhchh----------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 871111 2334555555555443 24799999999999999998887743 5999999998865
Q ss_pred C
Q 018750 164 G 164 (351)
Q Consensus 164 ~ 164 (351)
|
T Consensus 162 G 162 (389)
T PF02450_consen 162 G 162 (389)
T ss_pred C
Confidence 4
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.95 E-value=6.4e-05 Score=64.70 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=64.0
Q ss_pred CCCeEEEEecCCCCccc-hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC---CCccch
Q 018750 35 GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK---KTEYTT 110 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~ 110 (351)
++..+||+||+..+-+. -....+-.... ......+.+-||..|.--...- ...|+-
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~--------------------g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr 174 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDS--------------------GNDGVPVVFSWPSRGSLLGYNYDRESTNYSR 174 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhc--------------------CCCcceEEEEcCCCCeeeecccchhhhhhhH
Confidence 44579999999876542 12222222220 0256778899997765322111 123333
Q ss_pred HhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC--------CcccceEEEeccC
Q 018750 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--------PERVLSLALLNVT 161 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~--------p~~v~~lvl~~~~ 161 (351)
.++..-|..+.+....++|+|++||||.+++++...+. +.+++.+|+.+|-
T Consensus 175 ~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 175 PALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 33333333333444567899999999999999877652 3467888888754
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00083 Score=55.43 Aligned_cols=105 Identities=17% Similarity=0.194 Sum_probs=68.8
Q ss_pred eEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC--CCCCCCCCCccchHhH
Q 018750 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG--RSSVPVKKTEYTTKIM 113 (351)
Q Consensus 38 ~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~~ 113 (351)
++|++||++.+... ...+.+.+.+. -|..|+++|. |-| .| ......++
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~---------------------~g~~v~~lei-g~g~~~s------~l~pl~~Q 76 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEEL---------------------PGSPVYCLEI-GDGIKDS------SLMPLWEQ 76 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhC---------------------CCCeeEEEEe-cCCcchh------hhccHHHH
Confidence 59999999987765 56666555541 3888999997 344 11 11123344
Q ss_pred HHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCCCCCCCCc
Q 018750 114 AKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 114 ~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~ 170 (351)
++.+.+.+.... .+-+.++|.|.||.++-.++..-++ .|..+|.++++..+....|.
T Consensus 77 v~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~ 136 (296)
T KOG2541|consen 77 VDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPR 136 (296)
T ss_pred HHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCC
Confidence 443333333211 1348999999999999999887653 59999999988766544444
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00024 Score=66.76 Aligned_cols=78 Identities=15% Similarity=0.072 Sum_probs=49.6
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCccchHhHHH---HHHHHHHHhCC--cceEEEEEchhhHHHHHHHHh--CCcccc
Q 018750 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAK---DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM--VPERVL 153 (351)
Q Consensus 85 g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~---dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~ 153 (351)
++-|+.+++| |+..+........+-+.|... .+.+-++..|. ++|.|+|+|.||..+..++.. .+..++
T Consensus 125 ~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~ 204 (493)
T cd00312 125 NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFH 204 (493)
T ss_pred CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHH
Confidence 3899999998 333332211112233444443 34444455554 579999999999998887765 234688
Q ss_pred eEEEeccCC
Q 018750 154 SLALLNVTG 162 (351)
Q Consensus 154 ~lvl~~~~~ 162 (351)
++|+.++..
T Consensus 205 ~~i~~sg~~ 213 (493)
T cd00312 205 RAISQSGSA 213 (493)
T ss_pred HHhhhcCCc
Confidence 999988764
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00064 Score=60.02 Aligned_cols=67 Identities=15% Similarity=0.057 Sum_probs=56.3
Q ss_pred HHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
......++++|.++|.|..|.+..+.....+.+.+.....+..+|+ +|.... ..+.+.|..|+....
T Consensus 254 P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 254 PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 3445567789999999999999999999999999966778889998 998765 677888899988754
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00014 Score=63.79 Aligned_cols=109 Identities=15% Similarity=0.056 Sum_probs=72.0
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
..|+||++||.|-.-.....++..|..-++.++ ...++++|+.-...-.. ....+.-+.+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-----------------~~SILvLDYsLt~~~~~-~~~yPtQL~qlv 182 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-----------------EVSILVLDYSLTSSDEH-GHKYPTQLRQLV 182 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-----------------CCeEEEEeccccccccC-CCcCchHHHHHH
Confidence 468999999998766555444444433222221 34888888764330011 111344577778
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC-----cccceEEEeccC
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP-----ERVLSLALLNVT 161 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~ 161 (351)
+-...+++..|.++++|+|-|.||.+++.+.+... ...+++|+++|-
T Consensus 183 ~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 183 ATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred HHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 88888887788899999999999999998765421 125789999975
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.014 Score=53.14 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=79.5
Q ss_pred cccccC---CeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHHHhcC------------CCCCCCCchhhhcccc
Q 018750 18 AALNDN---GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAG------------TDKPNDDDETILQDSV 77 (351)
Q Consensus 18 ~~~~~~---g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~~l~~------------~~~~~~~~~~~~~~~~ 77 (351)
.+++++ +..|+|+-.. ..+|.||.+.|.+|.+..- .++.++.. +--+++
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWn---------- 115 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWN---------- 115 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCcccc----------
Confidence 445555 7888876443 2467899999999887654 33332221 111122
Q ss_pred cCCCCCCCeEEEEecCC-CCCCCCCCCCC-CccchHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHh-
Q 018750 78 ESGDGGAGIEVCAFDNR-GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM- 147 (351)
Q Consensus 78 ~~~~~~~g~~vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~- 147 (351)
+-.+++.+|.| |.|.|...... ...+-+..++|+..++... ..++++|.|-|++|...-.+|..
T Consensus 116 ------k~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 116 ------KEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred ------ccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 14578999988 88888754431 1124455566766666532 34689999999999777666654
Q ss_pred ---CC------cccceEEEeccCC
Q 018750 148 ---VP------ERVLSLALLNVTG 162 (351)
Q Consensus 148 ---~p------~~v~~lvl~~~~~ 162 (351)
.. -.++|+++-+|..
T Consensus 190 ~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 190 LKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HhccccccCCcccceEEEecCccc
Confidence 21 2477888777654
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.004 Score=54.74 Aligned_cols=59 Identities=17% Similarity=0.250 Sum_probs=47.0
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhC------------C-----------C-ceEEEcCC-CccccccChHHHHHHHH
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLY------------P-----------V-ARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------~-----------~-~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
.++||+..|..|.+++.-..+.+.+.+. + + .+++.+.+ ||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999887777777652 0 1 34455566 99996 59999999999
Q ss_pred HHHHh
Q 018750 316 DLIKA 320 (351)
Q Consensus 316 ~fl~~ 320 (351)
+||..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00037 Score=63.84 Aligned_cols=122 Identities=14% Similarity=0.059 Sum_probs=76.4
Q ss_pred ccccccCCeEEEEEEcCC-----CCCeEEEEecCCCCc--cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 17 DAALNDNGIKIFYRTYGR-----GPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-----~~p~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.-..+.||.+|.|...++ ..|++|+--|...-+ -.|.+......+ +|...+
T Consensus 397 ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLe----------------------rGg~~v 454 (648)
T COG1505 397 FFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLE----------------------RGGVFV 454 (648)
T ss_pred EEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHh----------------------cCCeEE
Confidence 334566899999988853 256665544432222 234444444444 588889
Q ss_pred EecCCCCCCCCCC------CCCCccchHhHHHHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 90 AFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 90 ~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
..+.||=|+=... .....-.++|+++....+++. |+ +++.+.|-|-||.+.-.+..++|+.+.++|+--|
T Consensus 455 ~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 455 LANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred EEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 9999987764321 000122344444444444433 33 5789999999999999999999998888876654
Q ss_pred C
Q 018750 161 T 161 (351)
Q Consensus 161 ~ 161 (351)
.
T Consensus 534 l 534 (648)
T COG1505 534 L 534 (648)
T ss_pred h
Confidence 3
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00046 Score=52.13 Aligned_cols=97 Identities=13% Similarity=0.214 Sum_probs=61.8
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE-EEEecCCCCCCCCCCCCCCccchHhH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE-VCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
|...||++-|++..+.....+.. . ..+. ++++|+.... .++++.
T Consensus 10 gd~LIvyFaGwgtpps~v~HLil--p-----------------------eN~dl~lcYDY~dl~--------ldfDfs-- 54 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLIL--P-----------------------ENHDLLLCYDYQDLN--------LDFDFS-- 54 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhccC--C-----------------------CCCcEEEEeehhhcC--------cccchh--
Confidence 44478999999988876544332 2 2454 5778875221 111111
Q ss_pred HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
..+.+.||++|||-.+|-++.... ++++.+.+++.+.+....-.++.......
T Consensus 55 -----------Ay~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTgLpcDds~GIp~AIF~gT 107 (214)
T COG2830 55 -----------AYRHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTGLPCDDSFGIPPAIFKGT 107 (214)
T ss_pred -----------hhhhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCCCCccccCCCCHHHHHHH
Confidence 124678999999999999998876 47888888888765554444444444433
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00016 Score=63.16 Aligned_cols=108 Identities=20% Similarity=0.191 Sum_probs=78.3
Q ss_pred CCCCeEEEEecCCCCccchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC-----
Q 018750 34 RGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK----- 105 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~----- 105 (351)
+++.+|+|.-|.-|+.+.|.. ++-.++.. .+--++..++|-+|+|-+....
T Consensus 78 ~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---------------------~~AllVFaEHRyYGeS~PFG~~s~k~~ 136 (492)
T KOG2183|consen 78 KGEGPIFFYTGNEGDIEWFANNTGFMWDLAPE---------------------LKALLVFAEHRYYGESLPFGSQSYKDA 136 (492)
T ss_pred CCCCceEEEeCCcccHHHHHhccchHHhhhHh---------------------hCceEEEeehhccccCCCCcchhccCh
Confidence 343459999999888765532 33334432 3567999999999999754321
Q ss_pred ---CccchHhHHHHHHHHHHHhCC------cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 106 ---TEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 106 ---~~~~~~~~~~dl~~~l~~~~~------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
...+.++-.+|...++..++. .+|+.+|.|+|||+|..+=.+||..|.|....+.+.
T Consensus 137 ~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 137 RHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 234567777788877777643 379999999999999999999999888877666543
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00012 Score=61.52 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=56.9
Q ss_pred eEEEEecCCCCc---cchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 38 KVILITGLAGTH---DAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 38 ~vv~~HG~~~~~---~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
+||+.||+|.+. ..+.. +++.... |..|.+++.- -+.++........++.
T Consensus 7 PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-----------------------G~yV~si~ig-~~~~~D~~~s~f~~v~ 62 (279)
T PF02089_consen 7 PVVIWHGMGDSCCNPSSMGSIKELIEEQHP-----------------------GTYVHSIEIG-NDPSEDVENSFFGNVN 62 (279)
T ss_dssp -EEEE--TT--S--TTTHHHHHHHHHHHST-----------------------T--EEE--SS-SSHHHHHHHHHHSHHH
T ss_pred cEEEEEcCccccCChhHHHHHHHHHHHhCC-----------------------CceEEEEEEC-CCcchhhhhhHHHHHH
Confidence 699999999753 23433 3444443 7888888873 2211100000112345
Q ss_pred hHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCCCCCCCCc
Q 018750 112 IMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~ 170 (351)
+.++.+.+.+..... +-++++|+|.||.++-.++.+.|+ .|+.+|.++++..+....|.
T Consensus 63 ~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~p~ 124 (279)
T PF02089_consen 63 DQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGLPF 124 (279)
T ss_dssp HHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-TC
T ss_pred HHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccCCc
Confidence 555555555543211 359999999999999999999864 69999999998766555444
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.012 Score=52.26 Aligned_cols=34 Identities=18% Similarity=0.059 Sum_probs=30.2
Q ss_pred ceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 128 QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 128 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
|++++|+|.||.+|...|.-.|..+++++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999989888865554
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0022 Score=50.97 Aligned_cols=82 Identities=18% Similarity=0.149 Sum_probs=50.5
Q ss_pred CCCCCCeEEEEecCCC---CCCCCCCCCCCccchHhHHH-HHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc--ccc
Q 018750 80 GDGGAGIEVCAFDNRG---MGRSSVPVKKTEYTTKIMAK-DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVL 153 (351)
Q Consensus 80 ~~~~~g~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~-dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~ 153 (351)
+..+.||.|+..+.-- +-.+...+.....+..+.+. ....++.-...+.+.+|.||+||...+.+..++|+ +|.
T Consensus 139 rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~ 218 (297)
T KOG3967|consen 139 RAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVF 218 (297)
T ss_pred HHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceE
Confidence 3444699999987641 22222211111112333333 23344444566789999999999999999999984 577
Q ss_pred eEEEeccC
Q 018750 154 SLALLNVT 161 (351)
Q Consensus 154 ~lvl~~~~ 161 (351)
++.+.+++
T Consensus 219 aialTDs~ 226 (297)
T KOG3967|consen 219 AIALTDSA 226 (297)
T ss_pred EEEeeccc
Confidence 77776654
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.001 Score=57.77 Aligned_cols=55 Identities=27% Similarity=0.235 Sum_probs=41.6
Q ss_pred cchHhHH-HHHHHHHHHhCC-----cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 108 YTTKIMA-KDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 108 ~~~~~~~-~dl~~~l~~~~~-----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+.+++++ +++-+.+++... +.-.++||||||.-|+.+|.++|+++..+..+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 5555544 355545544322 268999999999999999999999999999988864
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.042 Score=46.23 Aligned_cols=101 Identities=18% Similarity=0.165 Sum_probs=71.0
Q ss_pred CCeEEEEecCCCCcc-chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 36 PTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
.|.||++-...|+.. ..+...+.|.. ...|+.-|+---- ..+.....++++|++
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-----------------------~~~vyitDW~dAr--~Vp~~~G~FdldDYI 157 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-----------------------YHDVYITDWVDAR--MVPLEAGHFDLDDYI 157 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-----------------------ccceeEeeccccc--eeecccCCccHHHHH
Confidence 456777777766543 45666677776 6789999985322 223333578999999
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHH-----HHHHHhCCcccceEEEeccCC
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIA-----CKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a-----~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+.+.+++..+|.+ +++++.|.-+.-. +..+...|..-..+++++++.
T Consensus 158 dyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 158 DYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred HHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 9999999999965 8888888865433 333344566788899988764
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0011 Score=51.45 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=37.0
Q ss_pred HhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccCC
Q 018750 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTG 162 (351)
Q Consensus 111 ~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 162 (351)
..+.+.+...++.. ...+++++|||+||.+|..++..... .+..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 33444444444443 55789999999999999999887754 567788887763
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.012 Score=58.32 Aligned_cols=95 Identities=16% Similarity=0.143 Sum_probs=65.2
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
+..|+++|+|.+-+....+.+++..|.- |-+|.-....- ...++++.
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle~--------------------------------PaYglQ~T~~v-P~dSies~ 2167 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLEI--------------------------------PAYGLQCTEAV-PLDSIESL 2167 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcCC--------------------------------cchhhhccccC-CcchHHHH
Confidence 4556799999988877666666655432 23332211111 23378888
Q ss_pred HHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCC--cccceEEEeccC
Q 018750 114 AKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVT 161 (351)
Q Consensus 114 ~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~lvl~~~~ 161 (351)
++....-++.+.. .|+.++|+|+|+.++..+|.... +....+|++++.
T Consensus 2168 A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2168 AAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred HHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 8877777777754 58999999999999999887542 345669999986
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0029 Score=60.05 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=48.1
Q ss_pred CCeEEEEecCC----CCCCCCCCCCC-CccchHhHHHHHHHH---HHHhCC--cceEEEEEchhhHHHHHHHHhC--Ccc
Q 018750 84 AGIEVCAFDNR----GMGRSSVPVKK-TEYTTKIMAKDVIAL---MDHLGW--KQAHVFGHSMGAMIACKLAAMV--PER 151 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~~~~~~-~~~~~~~~~~dl~~~---l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~ 151 (351)
++.-|+.+++| |+-.+...... ..+-+.|+...+.-+ |...|- ++|.|+|+|.||..+...+..- ...
T Consensus 155 ~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L 234 (535)
T PF00135_consen 155 KDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGL 234 (535)
T ss_dssp HTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTS
T ss_pred CCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccc
Confidence 48999999988 44333222211 355566666555444 444554 4799999999999888766652 246
Q ss_pred cceEEEeccCC
Q 018750 152 VLSLALLNVTG 162 (351)
Q Consensus 152 v~~lvl~~~~~ 162 (351)
++++|+.++..
T Consensus 235 F~raI~~SGs~ 245 (535)
T PF00135_consen 235 FHRAILQSGSA 245 (535)
T ss_dssp BSEEEEES--T
T ss_pred ccccccccccc
Confidence 99999999854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.057 Score=50.67 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=58.4
Q ss_pred CCeEEEEecCCCCCCCCCC------CCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceE
Q 018750 84 AGIEVCAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l 155 (351)
+|+-.-...-||=|.-... .-....++.|+++....+++.- ..+.++++|.|.||++.-..+.+.|+.++++
T Consensus 476 RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~i 555 (682)
T COG1770 476 RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGI 555 (682)
T ss_pred CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhhe
Confidence 6887777777876543321 0113457788888777777642 2257999999999999999999999999999
Q ss_pred EEeccCC
Q 018750 156 ALLNVTG 162 (351)
Q Consensus 156 vl~~~~~ 162 (351)
|+-.|..
T Consensus 556 iA~VPFV 562 (682)
T COG1770 556 IAQVPFV 562 (682)
T ss_pred eecCCcc
Confidence 9887753
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.1 Score=43.19 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=49.8
Q ss_pred chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH----HHHHHHHHh--
Q 018750 51 AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK----DVIALMDHL-- 124 (351)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~----dl~~~l~~~-- 124 (351)
.|+.+.+.|++ +||.|++.-+.- .++-...++ .....++.+
T Consensus 35 tYr~lLe~La~----------------------~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~ 81 (250)
T PF07082_consen 35 TYRYLLERLAD----------------------RGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQK 81 (250)
T ss_pred HHHHHHHHHHh----------------------CCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999998 799999986631 111111222 222222222
Q ss_pred --CC----cceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 125 --GW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 125 --~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+. -|++-+|||+|+-+-+.+...++..-++-|+++-
T Consensus 82 ~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 82 RGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred hcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 22 2678899999999999888777655577777763
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0025 Score=59.00 Aligned_cols=54 Identities=17% Similarity=0.173 Sum_probs=37.3
Q ss_pred HhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCC---------------cccceEEEeccCCCC
Q 018750 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP---------------ERVLSLALLNVTGGG 164 (351)
Q Consensus 111 ~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p---------------~~v~~lvl~~~~~~~ 164 (351)
+++-..+.++++.. +.++|+|+||||||.+++.+..... +.|++.|.++++..+
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 34444455555433 4579999999999999998766321 248899999987543
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0032 Score=47.98 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC
Q 018750 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
...+.+..+++..+..++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4455566655555556899999999999999888763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0098 Score=53.84 Aligned_cols=117 Identities=20% Similarity=0.154 Sum_probs=69.8
Q ss_pred CCeEEEEEEcC---CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCC-eEEEEecCC-
Q 018750 23 NGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNR- 94 (351)
Q Consensus 23 ~g~~l~y~~~g---~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~- 94 (351)
|...|..+.-. ++.|++|+|||.+ |+......-...|++ +| +-|+.+++|
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~----------------------~g~vVvVSvNYRL 135 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAA----------------------RGDVVVVSVNYRL 135 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHh----------------------cCCEEEEEeCccc
Confidence 34445544433 3558999999974 333332223456666 45 888999887
Q ss_pred ---CCCC-CCCC---CCCCccchHhHH---HHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCc---ccceEEEec
Q 018750 95 ---GMGR-SSVP---VKKTEYTTKIMA---KDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLN 159 (351)
Q Consensus 95 ---G~G~-S~~~---~~~~~~~~~~~~---~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~ 159 (351)
|+=. |... ......-+.|++ +.+.+-|+++|- ++|.|+|+|-||+.++.+... |. .+.++|+.+
T Consensus 136 G~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~S 214 (491)
T COG2272 136 GALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALS 214 (491)
T ss_pred ccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhC
Confidence 2211 1111 000122344444 455566677765 479999999999988877654 43 478888888
Q ss_pred cCC
Q 018750 160 VTG 162 (351)
Q Consensus 160 ~~~ 162 (351)
+..
T Consensus 215 g~~ 217 (491)
T COG2272 215 GAA 217 (491)
T ss_pred CCC
Confidence 764
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.011 Score=53.70 Aligned_cols=118 Identities=15% Similarity=0.048 Sum_probs=73.3
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcC-------CCCCCCCchhhhcccccCCCCCCCeEEEEec-CCCCCCCCCCCCCC
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAG-------TDKPNDDDETILQDSVESGDGGAGIEVCAFD-NRGMGRSSVPVKKT 106 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D-~~G~G~S~~~~~~~ 106 (351)
.+|.|+.+.|.+|++..|..+.+.-.. +..++|| ...+ ..-+++.+| .-|.|.|.......
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP---------~SW~--~~adLvFiDqPvGTGfS~a~~~e~ 168 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNP---------GSWL--DFADLVFIDQPVGTGFSRALGDEK 168 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCc---------cccc--cCCceEEEecCcccCccccccccc
Confidence 367899999999999888766432211 1111122 0000 134799999 55999998533223
Q ss_pred ccchHhHHHHHHHHHHH-------hCC--cceEEEEEchhhHHHHHHHHhCCc---ccceEEEeccCCC
Q 018750 107 EYTTKIMAKDVIALMDH-------LGW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGG 163 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~~-------~~~--~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~ 163 (351)
.-+.....+|+..+.+. ... .+.+|+|.|+||.-+..+|...-+ ..++++++.+...
T Consensus 169 ~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 169 KKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred ccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 34455555555555443 333 389999999999988888765433 3677777766543
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.013 Score=52.85 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=63.5
Q ss_pred CeEEEEecCCCCCCCCCCCCC-----CccchHhHHHHHHHHHHHhCC-------cceEEEEEchhhHHHHHHHHhCCccc
Q 018750 85 GIEVCAFDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALMDHLGW-------KQAHVFGHSMGAMIACKLAAMVPERV 152 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~~~~-------~~v~lvG~S~Gg~~a~~~a~~~p~~v 152 (351)
|-.|+..++|-+|.|.+.... ...+.++...|+..+++++.. .|.+.+|.|+-|.++..+=+++|+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 779999999999988643321 234678889999999988732 27999999999999999999999999
Q ss_pred ceEEEeccCC
Q 018750 153 LSLALLNVTG 162 (351)
Q Consensus 153 ~~lvl~~~~~ 162 (351)
.+-|.-+++.
T Consensus 198 ~GsvASSapv 207 (514)
T KOG2182|consen 198 VGSVASSAPV 207 (514)
T ss_pred eeecccccce
Confidence 8888777653
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0039 Score=55.89 Aligned_cols=88 Identities=19% Similarity=0.228 Sum_probs=55.6
Q ss_pred cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE------EEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHH
Q 018750 50 DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE------VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDH 123 (351)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~ 123 (351)
..|..+++.|.. -||. -..+|+|= |....+..+..+..+..-|......
T Consensus 124 ~~w~~~i~~lv~----------------------~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~ 178 (473)
T KOG2369|consen 124 WYWHELIENLVG----------------------IGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKL 178 (473)
T ss_pred HHHHHHHHHHHh----------------------hCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHH
Confidence 367788888877 3554 45678872 2111111122334444444444444
Q ss_pred hCCcceEEEEEchhhHHHHHHHHhCCc--------ccceEEEeccCC
Q 018750 124 LGWKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTG 162 (351)
Q Consensus 124 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~ 162 (351)
-|.+|++||+||||+.+.+.+...+++ .+++++-++++.
T Consensus 179 ~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 179 NGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred cCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 566899999999999999999988876 266666666543
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.011 Score=49.01 Aligned_cols=47 Identities=21% Similarity=0.215 Sum_probs=35.2
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC----CcccceEEEeccCC
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTG 162 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl~~~~~ 162 (351)
+-+..+++..+ +++.+.|||.||.+|..++... .++|.+++..++++
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 33444444444 4699999999999999988874 35788999888864
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.049 Score=50.82 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=57.5
Q ss_pred CCeEEEEecCCCCCCCCCC---C---CCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceE
Q 018750 84 AGIEVCAFDNRGMGRSSVP---V---KKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~---~---~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l 155 (351)
+|+-....|.||=|.-... . .....+++|+.....-+++.- ..++..+.|.|.||.++..++.++|+.+.++
T Consensus 498 ~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~av 577 (712)
T KOG2237|consen 498 RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAV 577 (712)
T ss_pred cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhh
Confidence 6998889999987654321 1 012346677777666666542 3367999999999999999999999999988
Q ss_pred EEeccC
Q 018750 156 ALLNVT 161 (351)
Q Consensus 156 vl~~~~ 161 (351)
|+-.|.
T Consensus 578 ia~Vpf 583 (712)
T KOG2237|consen 578 IAKVPF 583 (712)
T ss_pred hhcCcc
Confidence 876654
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.011 Score=49.37 Aligned_cols=49 Identities=12% Similarity=0.303 Sum_probs=39.3
Q ss_pred HHHHHHHHHHH---hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 113 MAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 113 ~~~dl~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+.+++.-+++. .+.++-.++|||+||.+++.....+|+.+...++++|.
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 33444555554 23457899999999999999999999999999999986
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.015 Score=48.57 Aligned_cols=24 Identities=33% Similarity=0.307 Sum_probs=20.1
Q ss_pred CCcceEEEEEchhhHHHHHHHHhC
Q 018750 125 GWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 125 ~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 346799999999999999887753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.014 Score=51.57 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=81.4
Q ss_pred EEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC-CC
Q 018750 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV-KK 105 (351)
Q Consensus 27 l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~-~~ 105 (351)
+.....+...|+|+..-|++.+..-...-...|. +-+-+.+++|-+|.|.... +.
T Consensus 54 vtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Ll------------------------d~NQl~vEhRfF~~SrP~p~DW 109 (448)
T PF05576_consen 54 VTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLL------------------------DGNQLSVEHRFFGPSRPEPADW 109 (448)
T ss_pred EEEEEcCCCCCeEEEecCcccccCccccchhHhh------------------------ccceEEEEEeeccCCCCCCCCc
Confidence 3334444567888888898876543322222332 3578999999999998644 33
Q ss_pred CccchHhHHHHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 106 TEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
...++.+-+.|...+++.++. ++.+--|.|=||+.++.+=.-+|+-|++.|.-..+
T Consensus 110 ~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 110 SYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 456889999999988887742 57888899999999998888899999998876544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.011 Score=42.96 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=26.5
Q ss_pred CCCCccccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHH
Q 018750 13 SAAPDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQ 55 (351)
Q Consensus 13 ~~~~~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~ 55 (351)
+..|.-.++++|..||+....+ +..+|||+||++||-..|.++
T Consensus 66 N~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 66 NSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp TTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred HcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 3455556778899999877653 333799999999998777655
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.039 Score=43.67 Aligned_cols=54 Identities=24% Similarity=0.234 Sum_probs=42.4
Q ss_pred hHhHHHHHHHHHHHhC-----CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 110 TKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
-+.-+.+|..|++.+. ..++.++|||+|+.++-..+...+..++.+|++.+++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 4556667777777653 23689999999999999998886778999999988753
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.035 Score=42.80 Aligned_cols=114 Identities=14% Similarity=0.132 Sum_probs=65.8
Q ss_pred CeEEEEEEcCCCCCeEEEEecCCCCccchHH------HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGP------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 24 g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
+..+.+..+|.+..+||+++--++....|.. +.+.+.. .....++++ |-.
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~----------------------G~vQlft~~--gld 69 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEE----------------------GLVQLFTLS--GLD 69 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhc----------------------CcEEEEEec--ccc
Confidence 5667788888744447777777776655533 2333332 123444444 222
Q ss_pred CCCCCCC-C-CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 98 RSSVPVK-K-TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 98 ~S~~~~~-~-~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
..+.... . .....+...+--.-+++..-.....+-|.||||..|+.+.-++|+.+.++|.+++.
T Consensus 70 sESf~a~h~~~adr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 70 SESFLATHKNAADRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred hHhHhhhcCCHHHHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 1111110 0 01112222222233444333345677899999999999999999999999999976
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.039 Score=49.94 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=33.2
Q ss_pred HhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh---C-----CcccceEEEeccC
Q 018750 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~---~-----p~~v~~lvl~~~~ 161 (351)
.++.+.+.+++......++++.|||+||.+|..+|.. + .+++.+++..+.+
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 3444555556655555689999999999999987642 1 1234456666653
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.051 Score=46.20 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=32.0
Q ss_pred ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 128 QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 128 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
.-+|.|.|+||.+++..+..+|+++-.++..++..
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 46899999999999999999999999999998863
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.048 Score=49.56 Aligned_cols=50 Identities=18% Similarity=0.249 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh---C-----CcccceEEEeccC
Q 018750 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~---~-----p~~v~~lvl~~~~ 161 (351)
++.+.+..+++.....++++.|||+||++|..+|.. + ..++.++...+++
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 455667777777666789999999999999988752 1 2245566666654
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.028 Score=50.38 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCcc--eEEEEEchhhHHHHHHHHh
Q 018750 113 MAKDVIALMDHLGWKQ--AHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 113 ~~~dl~~~l~~~~~~~--v~lvG~S~Gg~~a~~~a~~ 147 (351)
+...|..+++.....+ +++.|||+||.+|+.+|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3334445555444343 9999999999999998864
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.026 Score=50.59 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=28.7
Q ss_pred HhHHHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHh
Q 018750 111 KIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+++.+++..+++....+ ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666777777766433 68999999999999998865
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.038 Score=44.69 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=32.3
Q ss_pred chHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhC
Q 018750 109 TTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
-..|..+.+..+|++.+. ++++|+|||.|+.++.++..++
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 356666677777877754 5899999999999999998875
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.29 E-value=1.4 Score=38.83 Aligned_cols=65 Identities=3% Similarity=0.000 Sum_probs=49.0
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhC-CCceE--EEcCC-Ccccccc-ChHHHHHHHHHHHHhcCCCC
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-PVARM--IDLPG-GHLVSHE-RTEEVNQALIDLIKASEKKI 325 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~--~~~~g-gH~~~~~-~p~~~~~~i~~fl~~~~~~~ 325 (351)
..+.+.+.+..|.++|....+++.+... .+..+ +-+.+ -|..+.. .|....+...+|++......
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 4578999999999999999988865441 23333 33444 7877654 89999999999999887654
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.044 Score=43.71 Aligned_cols=73 Identities=12% Similarity=0.140 Sum_probs=42.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHH----HHhCCcceEEEEEchhhHHHHHHHHh--C----Ccccce
Q 018750 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALM----DHLGWKQAHVFGHSMGAMIACKLAAM--V----PERVLS 154 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l----~~~~~~~v~lvG~S~Gg~~a~~~a~~--~----p~~v~~ 154 (351)
...+..+++|-..... ....+...=+.++...+ ..-...+++|+|+|.||.++..++.. . .++|.+
T Consensus 39 ~~~~~~V~YpA~~~~~----~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~a 114 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN----SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAA 114 (179)
T ss_dssp EEEEEE--S---SCGG----SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEE
T ss_pred eeEEEecCCCCCCCcc----cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEE
Confidence 4667767776322211 01223333344444444 33344689999999999999999877 2 357889
Q ss_pred EEEeccC
Q 018750 155 LALLNVT 161 (351)
Q Consensus 155 lvl~~~~ 161 (351)
+++++-+
T Consensus 115 vvlfGdP 121 (179)
T PF01083_consen 115 VVLFGDP 121 (179)
T ss_dssp EEEES-T
T ss_pred EEEecCC
Confidence 9998864
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.13 Score=49.15 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=45.6
Q ss_pred CCeEEEEecCC----CCCCCCCCCCCCccchHhHHHHHH---HHHHHhC--CcceEEEEEchhhHHHHHHHHhC--Cccc
Q 018750 84 AGIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDVI---ALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PERV 152 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~---~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v 152 (351)
+..-|+.+.+| |+...........+-+.|++..+. +-|...| .++|.|+|||.||..+..+...- ...+
T Consensus 143 ~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF 222 (545)
T KOG1516|consen 143 KDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLF 222 (545)
T ss_pred CCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHH
Confidence 35667777776 332222111113444555555444 4444454 35799999999999987765421 2346
Q ss_pred ceEEEeccCC
Q 018750 153 LSLALLNVTG 162 (351)
Q Consensus 153 ~~lvl~~~~~ 162 (351)
.++|..++..
T Consensus 223 ~~aI~~SG~~ 232 (545)
T KOG1516|consen 223 HKAISMSGNA 232 (545)
T ss_pred HHHHhhcccc
Confidence 6677766653
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.044 Score=48.41 Aligned_cols=37 Identities=24% Similarity=0.418 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHhC
Q 018750 112 IMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
+..+.|..+++..+.+ ++++.|||+||.+|..+|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445666667666543 589999999999999988653
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.045 Score=48.39 Aligned_cols=99 Identities=16% Similarity=0.239 Sum_probs=53.0
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCC-CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
+..++.+....++.-.+|+.||+-+ +...|...+....... -+. .+..+|+-....
T Consensus 67 ~~w~~p~~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~--------------------p~~---~iv~~g~~~~~~ 123 (405)
T KOG4372|consen 67 DLWDLPYSFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKKM--------------------PDK---LIVVRGKMNNMC 123 (405)
T ss_pred ccccCCcccccCCceEEEeccccccccHHHHHHHHHhhhcCC--------------------Ccc---eEeeeccccchh
Confidence 3444444222223347999999987 4556666665555411 123 333333322211
Q ss_pred CC-CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHH
Q 018750 102 PV-KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144 (351)
Q Consensus 102 ~~-~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~ 144 (351)
.. +.-.+--+..++++.+.+....++++..+|||+||.++..+
T Consensus 124 ~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 124 QTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred hccccceeeecccHHHHhhhhhccccceeeeeeeecCCeeeeEE
Confidence 11 10111123455555555555557899999999999887643
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.13 Score=46.05 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=26.7
Q ss_pred HhHHHHHHHHHHHhC---C-cceEEEEEchhhHHHHHHHHh
Q 018750 111 KIMAKDVIALMDHLG---W-KQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~---~-~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+++.+.+..+++.+. . .++++.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666552 1 368999999999999988754
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.23 Score=43.71 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=30.6
Q ss_pred CCcceEEEEEchhhHHHHHHHHhCCcc-----cceEEEeccC
Q 018750 125 GWKQAHVFGHSMGAMIACKLAAMVPER-----VLSLALLNVT 161 (351)
Q Consensus 125 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~-----v~~lvl~~~~ 161 (351)
|.+|+.|||||+|+.+...+.....++ |+.+++++.+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 667999999999999999877665443 8899999875
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.083 Score=48.43 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=28.5
Q ss_pred HhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHH
Q 018750 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~ 146 (351)
......+.++++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566677777666668999999999999998874
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.086 Score=47.26 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHh
Q 018750 112 IMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 147 (351)
++.+.|..+++....+ .|++.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3444566667665432 58999999999999998864
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.13 Score=33.00 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=19.6
Q ss_pred cccccCCeEEEEEEcC--C-------CCCeEEEEecCCCCccch
Q 018750 18 AALNDNGIKIFYRTYG--R-------GPTKVILITGLAGTHDAW 52 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g--~-------~~p~vv~~HG~~~~~~~~ 52 (351)
.+.+.||.-|...... + ++|+|++.||+.+++..|
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 4556688877655432 1 357899999999999887
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.11 Score=47.64 Aligned_cols=37 Identities=30% Similarity=0.342 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhC
Q 018750 112 IMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
++.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344556666665543 2689999999999999887653
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.11 Score=47.77 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=26.9
Q ss_pred HhHHHHHHHHHHHhCC-----cceEEEEEchhhHHHHHHHHh
Q 018750 111 KIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~-----~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+++.+.|..+++..+. .+|.+.|||+||.+|+..|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3444556666665532 379999999999999998853
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.13 Score=47.43 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHhC---C-cceEEEEEchhhHHHHHHHHh
Q 018750 112 IMAKDVIALMDHLG---W-KQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 112 ~~~~dl~~~l~~~~---~-~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+..++|..+++.+. . .++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 45566777776653 1 369999999999999988854
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.16 Score=46.77 Aligned_cols=36 Identities=28% Similarity=0.304 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHhCC-----cceEEEEEchhhHHHHHHHHh
Q 018750 112 IMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~-----~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
++.+.|..+++.... .++.+.|||+||.+|+.+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555666665532 269999999999999998754
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.16 Score=46.81 Aligned_cols=36 Identities=31% Similarity=0.315 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHhC-----C-cceEEEEEchhhHHHHHHHHh
Q 018750 112 IMAKDVIALMDHLG-----W-KQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 112 ~~~~dl~~~l~~~~-----~-~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
++.+.|..+++..+ . -++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44555666666552 1 269999999999999988753
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.92 Score=39.02 Aligned_cols=63 Identities=27% Similarity=0.354 Sum_probs=47.5
Q ss_pred CeEEEEecCC-CCCCCCCCCCCCcc--chHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHhC
Q 018750 85 GIEVCAFDNR-GMGRSSVPVKKTEY--TTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 85 g~~vi~~D~~-G~G~S~~~~~~~~~--~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
...++.+|.| |.|.|..... ..| +.++.+.|+.++++.+ ...|++++..|+||-+|..++...
T Consensus 71 ~adllfvDnPVGaGfSyVdg~-~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGS-SAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred hccEEEecCCCcCceeeecCc-ccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 3568888877 8888865443 233 4677888998888765 335899999999999999887654
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.71 Score=40.46 Aligned_cols=60 Identities=10% Similarity=0.049 Sum_probs=44.7
Q ss_pred hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.++..|-.++.+..|.+.++..+....+.++....+..+|+ .|...-. .+.+.+..|++.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHH
Confidence 45678999999999999999999999998855567788898 8976433 333444444443
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=91.69 E-value=1.2 Score=41.59 Aligned_cols=71 Identities=20% Similarity=0.254 Sum_probs=51.9
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHh----CC-------CceEEEcCC-Ccccccc--ChHHHHHHHHHHHH
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL----YP-------VARMIDLPG-GHLVSHE--RTEEVNQALIDLIK 319 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~-------~~~~~~~~g-gH~~~~~--~p~~~~~~i~~fl~ 319 (351)
+..+++-.-.+++.||-.|.++++....++++++ .. -.++..+|| +|+.--. .+-.....|.+|.+
T Consensus 346 LsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE 425 (474)
T PF07519_consen 346 LSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVE 425 (474)
T ss_pred HHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHh
Confidence 4445555678999999999999987776666554 21 146788899 9987544 45578889999998
Q ss_pred hcCCC
Q 018750 320 ASEKK 324 (351)
Q Consensus 320 ~~~~~ 324 (351)
+-...
T Consensus 426 ~G~AP 430 (474)
T PF07519_consen 426 NGKAP 430 (474)
T ss_pred CCCCC
Confidence 76543
|
It also includes several bacterial homologues of unknown function. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.3 Score=43.25 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=31.1
Q ss_pred HhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh
Q 018750 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
..+.+++..+++....-.+.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677788888888876689999999999999988765
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=91.31 E-value=1.1 Score=37.10 Aligned_cols=64 Identities=19% Similarity=0.168 Sum_probs=39.6
Q ss_pred CeEEEEecCCCC-CC-CCCCCCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhC
Q 018750 85 GIEVCAFDNRGM-GR-SSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 85 g~~vi~~D~~G~-G~-S~~~~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
|+.+..++.|.. +- +.........++.+=++.+.+.++.. .-++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 677778887751 11 00111112335555566666666552 226899999999999999877664
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.38 Score=45.14 Aligned_cols=21 Identities=29% Similarity=0.437 Sum_probs=18.4
Q ss_pred cceEEEEEchhhHHHHHHHHh
Q 018750 127 KQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 127 ~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 479999999999999988765
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.00 E-value=0.72 Score=43.06 Aligned_cols=49 Identities=24% Similarity=0.410 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhC---CcceEEEEEchhhHHHHHHHHh-----CCc------ccceEEEeccCC
Q 018750 114 AKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAM-----VPE------RVLSLALLNVTG 162 (351)
Q Consensus 114 ~~dl~~~l~~~~---~~~v~lvG~S~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~~ 162 (351)
...+...+...+ .++++.+||||||.++=.+... .|+ ...|+|+++.+.
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 333444444433 3589999999999888765443 232 367888888764
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=87.47 E-value=1.6 Score=40.81 Aligned_cols=77 Identities=18% Similarity=0.067 Sum_probs=51.8
Q ss_pred CCeEEEEecCCCCCCCCC--CCCCCccc-----------hHhHHHHHHHHHHHh-C--CcceEEEEEchhhHHHHHHHHh
Q 018750 84 AGIEVCAFDNRGMGRSSV--PVKKTEYT-----------TKIMAKDVIALMDHL-G--WKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~--~~~~~~~~-----------~~~~~~dl~~~l~~~-~--~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+||.++.=|- ||..+.. ... ...+ +.+.+..-+++++.+ + .+.-+..|.|.||..++..|++
T Consensus 58 ~G~A~~~TD~-Gh~~~~~~~~~~-~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQr 135 (474)
T PF07519_consen 58 RGYATASTDS-GHQGSAGSDDAS-FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQR 135 (474)
T ss_pred cCeEEEEecC-CCCCCccccccc-ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHh
Confidence 3999999997 5554432 111 1112 222222233444443 3 3457889999999999999999
Q ss_pred CCcccceEEEeccCC
Q 018750 148 VPERVLSLALLNVTG 162 (351)
Q Consensus 148 ~p~~v~~lvl~~~~~ 162 (351)
+|+.++++|.-+|+.
T Consensus 136 yP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 136 YPEDFDGILAGAPAI 150 (474)
T ss_pred ChhhcCeEEeCCchH
Confidence 999999999998863
|
It also includes several bacterial homologues of unknown function. |
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=85.19 E-value=1.6 Score=34.80 Aligned_cols=60 Identities=20% Similarity=0.211 Sum_probs=42.6
Q ss_pred CccEEEEeecCCccCCHHHHHHHH---HHhCCC-ceEEEcCC-CccccccC---hHHHHHHHHHHHHh
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLA---EKLYPV-ARMIDLPG-GHLVSHER---TEEVNQALIDLIKA 320 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~---~~~~~~-~~~~~~~g-gH~~~~~~---p~~~~~~i~~fl~~ 320 (351)
++++|-|-|+.|.|+.+.+..... ..+.+. ...++.+| ||+....- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 367788999999999876554444 444222 34556678 99877663 37889999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.82 E-value=2.1 Score=36.24 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=26.9
Q ss_pred HHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 120 ~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+.+.....++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 333334457999999999999999888774 333444443
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=84.82 E-value=2.1 Score=36.24 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=26.9
Q ss_pred HHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 120 ~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+.+.....++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 333334457999999999999999888774 333444443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 351 | ||||
| 3e3a_A | 293 | The Structure Of Rv0554 From Mycobacterium Tubercul | 2e-11 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 1e-10 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 1e-10 | ||
| 1s8o_A | 555 | Human Soluble Epoxide Hydrolase Length = 555 | 2e-10 | ||
| 1cqz_A | 554 | Crystal Structure Of Murine Soluble Epoxide Hydrola | 1e-09 | ||
| 3qyj_A | 291 | Crystal Structure Of Alr0039, A Putative AlphaBETA | 7e-09 | ||
| 2zjf_A | 362 | Crystal Structure Of Mycobacterium Tuberculosis Epo | 2e-08 | ||
| 2e3j_A | 356 | The Crystal Structure Of Epoxide Hydrolase B (Rv193 | 2e-08 | ||
| 3b12_A | 304 | Crystal Structure Of The Fluoroacetate Dehalogenase | 6e-08 | ||
| 1y37_A | 304 | Structure Of Fluoroacetate Dehalogenase From Burkho | 7e-08 | ||
| 3om8_A | 266 | The Crystal Structure Of A Hydrolase From Pseudomon | 1e-07 | ||
| 4f0j_A | 315 | Crystal Structure Of A Probable Hydrolytic Enzyme ( | 2e-07 | ||
| 4dgq_A | 280 | Crystal Structure Of Non-Heme Chloroperoxidase From | 2e-07 | ||
| 2xua_A | 266 | Crystal Structure Of The Enol-Lactonase From Burkho | 1e-06 | ||
| 3hi4_A | 271 | Switching Catalysis From Hydrolysis To Perhydrolysi | 2e-06 | ||
| 3hea_A | 271 | The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS E | 2e-06 | ||
| 3ia2_A | 271 | Pseudomonas Fluorescens Esterase Complexed To The R | 2e-06 | ||
| 1va4_A | 279 | Pseudomonas Fluorescens Aryl Esterase Length = 279 | 3e-06 | ||
| 3t4u_A | 271 | L29i Mutation In An Aryl Esterase From Pseudomonas | 3e-06 | ||
| 1q0r_A | 298 | Crystal Structure Of Aclacinomycin Methylesterase ( | 3e-06 | ||
| 3r3v_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 5e-06 | ||
| 3r3u_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 6e-06 | ||
| 3r41_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 6e-06 | ||
| 3r3y_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 7e-06 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 2e-05 | ||
| 1c4x_A | 285 | 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase | 3e-05 | ||
| 2ock_A | 254 | Crystal Structure Of Valacyclovir Hydrolase D123n M | 3e-05 | ||
| 2og1_A | 286 | Crystal Structure Of Bphd, A C-C Hydrolase From Bur | 4e-05 | ||
| 1azw_A | 313 | Proline Iminopeptidase From Xanthomonas Campestris | 4e-05 | ||
| 2ocg_A | 254 | Crystal Structure Of Human Valacyclovir Hydrolase L | 5e-05 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 5e-05 | ||
| 2puh_A | 286 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 8e-05 | ||
| 2rht_A | 283 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 9e-05 | ||
| 2ocl_A | 254 | Crystal Structure Of Valacyclovir Hydrolase S122a M | 1e-04 | ||
| 1hkh_A | 279 | Unligated Gamma Lactamase From An Aureobacterium Sp | 2e-04 | ||
| 3v1k_A | 286 | Crystal Structure Of The H265q Mutant Of A C-C Hydr | 3e-04 | ||
| 1ehy_A | 294 | X-Ray Structure Of The Epoxide Hydrolase From Agrob | 3e-04 | ||
| 2yys_A | 286 | Crystal Structure Of The Proline Iminopeptidase-Rel | 4e-04 | ||
| 1qtr_A | 317 | Crystal Structure Analysis Of The Prolyl Aminopepti | 4e-04 | ||
| 3vdx_A | 456 | Structure Of A 16 Nm Protein Cage Designed By Fusin | 5e-04 | ||
| 1a8s_A | 273 | Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | 5e-04 | ||
| 1a7u_A | 277 | Chloroperoxidase T Length = 277 | 6e-04 | ||
| 1bro_A | 277 | Bromoperoxidase A2 Length = 277 | 6e-04 | ||
| 3v1l_A | 286 | Crystal Structure Of The S112aH265Q MUTANT OF A C-C | 6e-04 | ||
| 1zoi_A | 276 | Crystal Structure Of A Stereoselective Esterase Fro | 8e-04 |
| >pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis Length = 293 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
| >pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555 | Back alignment and structure |
|
| >pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase. Length = 554 | Back alignment and structure |
|
| >pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA HYDROLASE FROM Nostoc Sp Pcc 7120. Length = 291 | Back alignment and structure |
|
| >pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide Hydrolase B Complexed With An Inhibitor Length = 362 | Back alignment and structure |
|
| >pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From Mycobacterium Tuberculosis At 2.1 Angstrom Length = 356 | Back alignment and structure |
|
| >pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104 Mutant From Burkholderia Sp. Fa1 In Complex With Fluoroacetate Length = 304 | Back alignment and structure |
|
| >pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia Sp. Fa1 Length = 304 | Back alignment and structure |
|
| >pdb|3OM8|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Aeruginosa Pa01 Length = 266 | Back alignment and structure |
|
| >pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution Length = 315 | Back alignment and structure |
|
| >pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From Burkholderia Cenocepacia Length = 280 | Back alignment and structure |
|
| >pdb|2XUA|A Chain A, Crystal Structure Of The Enol-Lactonase From Burkholderia Xenovorans Lb400 Length = 266 | Back alignment and structure |
|
| >pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P. Fluorescens Esterase Length = 271 | Back alignment and structure |
|
| >pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE Length = 271 | Back alignment and structure |
|
| >pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The R-Enantiomer Of A Sulfonate Transition State Analog Length = 271 | Back alignment and structure |
|
| >pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase Length = 279 | Back alignment and structure |
|
| >pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas Fluorescens Leads To Unique Peptide Flip And Increased Activity Length = 271 | Back alignment and structure |
|
| >pdb|1Q0R|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (Rdmc) With Bound Product Analogue, 10- Decarboxymethylaclacinomycin T (Dcmat) Length = 298 | Back alignment and structure |
|
| >pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - Asp110asnFLUOROACETATE Length = 306 | Back alignment and structure |
|
| >pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - WtAPO Length = 306 | Back alignment and structure |
|
| >pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - His280asnAPO Length = 306 | Back alignment and structure |
|
| >pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - His280asnFLUOROACETATE Length = 306 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd) From Rhodococcus Sp. Strain Rha1 Length = 285 | Back alignment and structure |
|
| >pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant Length = 254 | Back alignment and structure |
|
| >pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|1AZW|A Chain A, Proline Iminopeptidase From Xanthomonas Campestris Pv. Citri Length = 313 | Back alignment and structure |
|
| >pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase Length = 254 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With Its Substrate Hopda Length = 286 | Back alignment and structure |
|
| >pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With 3-Cl Hopda Length = 283 | Back alignment and structure |
|
| >pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant Length = 254 | Back alignment and structure |
|
| >pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species Length = 279 | Back alignment and structure |
|
| >pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400. Length = 286 | Back alignment and structure |
|
| >pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From Agrobacterium Radiobacter Ad1 Length = 294 | Back alignment and structure |
|
| >pdb|2YYS|A Chain A, Crystal Structure Of The Proline Iminopeptidase-Related Protein Ttha1809 From Thermus Thermophilus Hb8 Length = 286 | Back alignment and structure |
|
| >pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase From Serratia Marcescens Length = 317 | Back alignment and structure |
|
| >pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing Symmetric Oligomeric Domains Length = 456 | Back alignment and structure |
|
| >pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | Back alignment and structure |
|
| >pdb|1A7U|A Chain A, Chloroperoxidase T Length = 277 | Back alignment and structure |
|
| >pdb|1BRO|A Chain A, Bromoperoxidase A2 Length = 277 | Back alignment and structure |
|
| >pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From Pseudomonas Putida Ifo12996 Length = 276 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-45
Identities = 75/300 (25%), Positives = 109/300 (36%), Gaps = 42/300 (14%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGD 81
I + Y G G V+ I G G W P Q+
Sbjct: 31 RVINLAYDDNGTGDP-VVFIAGRGGAGRTWHPHQVPAFLA-------------------- 69
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
AG FDNRG+G + +TT+ M D AL++ L A V G SMGA IA
Sbjct: 70 --AGYRCITFDNRGIGATENA---EGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIA 124
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+L + PE V S L+ T G + + + P A L ++S
Sbjct: 125 QELMVVAPELVSSAVLMA-TRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFS 183
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
++ L + V A+ S ++S G Q+ + I +
Sbjct: 184 RKTLNDDVAVGDWIAMF--------SMWPIKSTPGLRCQLDCAPQTNRLP-AYRNIAAP- 233
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320
V VI DV+ R +A+ L P R + +P GHL ER E VN A++ +
Sbjct: 234 --VLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFFAS 290
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 5e-41
Identities = 69/300 (23%), Positives = 109/300 (36%), Gaps = 48/300 (16%)
Query: 23 NGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G + YR G P + L + T W QL L
Sbjct: 13 DGASLAYRLDGAAEKPL-LALSNSIGTTLHMWDAQLPALT-------------------- 51
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V +D RG G SSVP YT + +DV+ L+D L ++AH G S+G ++
Sbjct: 52 ---RHFRVLRYDARGHGASSVP--PGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIV 106
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
LA P+R+ L L N T IA +A+ + AA L +
Sbjct: 107 GQWLALHAPQRIERLVLAN-TSAWL---GPAAQWDERIA-AVLQAEDMSETAAGFLGNWF 161
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
LE R + + + + AT + +G G A + + I
Sbjct: 162 PPALLE-------RAEPVVERFRAMLMAT---NRHGLAGSFAAVRDTDLRA-QLARIERP 210
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320
VI G +D + + +A + AR++ LP HL + E + A++ + A
Sbjct: 211 ---TLVIAGAYDTVTAASHGELIAASI-AGARLVTLPAVHLSNVEFPQAFEGAVLSFLGA 266
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 7e-41
Identities = 53/318 (16%), Positives = 103/318 (32%), Gaps = 48/318 (15%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQL-KGLAGTDKPNDDDETILQDSVES 79
++++ +G P ++L+ G + W + + LA
Sbjct: 9 GDVELWSDDFGDPADPA-LLLVMGGNLSALGWPDEFARRLAD------------------ 49
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVK-KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
G+ V +D+R GRS+ Y +A D +A++D G +AHV G SMGA
Sbjct: 50 ----GGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGA 105
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
I +A +R+ SL +L G ++ +
Sbjct: 106 TITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALM 165
Query: 199 HYSQEYLEEYVGSSTRRAILY------------QEYVKGISATGMQSNYGFDGQIHACWM 246
+ E V + + + +
Sbjct: 166 NQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLP 225
Query: 247 HKMTQKDIQTIRSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVS 303
+++ + V VI HD IA + + LA + P AR+ ++PG GH +
Sbjct: 226 PPSRAAELREVT-----VPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALP 279
Query: 304 HERTEEVNQALIDLIKAS 321
+ + ++ +++
Sbjct: 280 SSVHGPLAEVILAHTRSA 297
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-40
Identities = 55/297 (18%), Positives = 101/297 (34%), Gaps = 58/297 (19%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGT-HDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
NG+++ Y+ G G V+L+ G+ G+ +GPQLK L
Sbjct: 10 NGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNK-------------------- 49
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKK-TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V A+D RG G S P + + AKD + LM L +K+ + G S G +
Sbjct: 50 --KLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGIT 107
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A AA P + + + + E V +
Sbjct: 108 ALIAAAKYPSYIHKMVIWGANAYVTD----------------EDSMIYEGIRDVSKWSER 151
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+++ LE G +++V GI + + + ++
Sbjct: 152 TRKPLEALYGYDYFAR-TCEKWVDGIRQFKHLPDGNI------------CRHLLPRVQCP 198
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++HG D + +A + + + +R+ +P H + +E N+ D
Sbjct: 199 ---ALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAED 251
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-40
Identities = 40/303 (13%), Positives = 85/303 (28%), Gaps = 41/303 (13%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I Y + G G +I + GL+ + + L+
Sbjct: 9 TRSNISYFSIGSGTP-IIFLHGLSLDKQSTCLFFEPLSNV-------------------- 47
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
+ D GMG S + ++ + A+ + +G ++ ++GHS G +A
Sbjct: 48 -GQYQRIYLDLPGMGNSDPI--SPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQ 104
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
+A + ++ L + L + + E A
Sbjct: 105 AIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIIN 164
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ +Y I + + F Q+ + +K F
Sbjct: 165 NQ-------------AWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPF 211
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321
++ GR+D + +L ++ L GH + ++ E V +
Sbjct: 212 K--IMVGRNDQVVGYQEQLKLIN-HNENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDEL 268
Query: 322 EKK 324
Sbjct: 269 NSN 271
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 4e-40
Identities = 54/297 (18%), Positives = 101/297 (34%), Gaps = 43/297 (14%)
Query: 25 IKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84
+ + Y P V+LI+GL G+ W PQL L
Sbjct: 5 LSLSPPPYADAPV-VVLISGLGGSGSYWLPQLAVLE-----------------------Q 40
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
+V +D RG G + + + Y+ MA ++ + G + V GH++GA++ +L
Sbjct: 41 EYQVVCYDQRGTGNNPDTLAED-YSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQL 99
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
A P V L +N + + R + + Y ++
Sbjct: 100 ALDYPASVTVLISVN-GWLRI---NAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADW 155
Query: 205 LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264
+ R L E ++ Q +++A + IR V
Sbjct: 156 MAA------RAPRLEAEDALALAHF--QGKNNLLRRLNALKRADFSH-HADRIRCP---V 203
Query: 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320
+I D++ + L L P ++ + +P GH + E N L++ + +
Sbjct: 204 QIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVTDPETFNALLLNGLAS 259
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 9e-40
Identities = 67/298 (22%), Positives = 107/298 (35%), Gaps = 51/298 (17%)
Query: 23 NGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVE 78
NG ++ YR G P ++L L W PQ+ L+
Sbjct: 10 NGTELHYRIDGERHGNAPW-IVLSNSLGTDLSMWAPQVAALS------------------ 50
Query: 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
V +D RG G S P K YT + + DV+ LMD L +A+ G SMG
Sbjct: 51 -----KHFRVLRYDTRGHGHSEAP--KGPYTIEQLTGDVLGLMDTLKIARANFCGLSMGG 103
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+ LAA +R+ +AL N T + R + A L
Sbjct: 104 LTGVALAARHADRIERVALCN-TAARIG-----SPEVWVPRAVKARTEGMHALADAVLPR 157
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
++ +Y+E R ++ T + G+ A + + I+
Sbjct: 158 WFTADYME-------REPVVLAMIRDVFVHTDKE---GYASNCEAIDAADLRP-EAPGIK 206
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALID 316
VI G HD+ A R LA+ + AR ++L H+ + ER + + ++D
Sbjct: 207 VP---ALVISGTHDLAATPAQGRELAQAI-AGARYVELDASHISNIERADAFTKTVVD 260
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 4e-39
Identities = 43/298 (14%), Positives = 85/298 (28%), Gaps = 30/298 (10%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ K Y G GP + + + +D
Sbjct: 8 IKTPRGKFEYFLKGEGPP-LCVTHLYSEYNDNGNTFANPFT------------------- 47
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V + +G G S +EY+ KD+ A+ + L + GHS G M
Sbjct: 48 ----DHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGM 103
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A A E + + + K +
Sbjct: 104 LALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQE 163
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+ E+ S +E +K ++ N + + ++ ++ ++
Sbjct: 164 ERKALSREWALMSFYSEEKLEEALKLPNSGKTVGN-RLNYFRQVEYKDYDVRQKLKFVKI 222
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
F + G+HDV ++ +A + P A + H E ++ NQ + D
Sbjct: 223 PSF---IYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESNHNPFVEEIDKFNQFVND 276
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 4e-38
Identities = 66/304 (21%), Positives = 100/304 (32%), Gaps = 45/304 (14%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I ++Y +G G V+LI G + +W Q L
Sbjct: 11 TSIDLYYEDHGTGQP-VVLIHGFPLSGHSWERQSAALLD--------------------- 48
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V +D RG G+SS P T Y A D+ +++ L + A + G S G
Sbjct: 49 -AGYRVITYDRRGFGQSSQPT--TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVA 105
Query: 143 K-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDTHY 200
+ +++ R+ +A L A R A
Sbjct: 106 RYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN 165
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ--KDIQTIR 258
L+E +G + +E V+ T GF A T DI I
Sbjct: 166 DFYNLDENLG-----TRISEEAVRNSWNTAASG--GFFAAA-AAPTTWYTDFRADIPRID 217
Query: 259 SAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
V ++HG D I R+ K P A +++ G H + EEVN AL+
Sbjct: 218 -----VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL 272
Query: 316 DLIK 319
+
Sbjct: 273 AFLA 276
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 3e-37
Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 50/297 (16%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+ G P ++L+ G + W P + +
Sbjct: 53 RFGQTHVIASGPEDAPP-LVLLHGALFSSTMWYPNIADWS-------------------- 91
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+ A D G S+P + T A ++ + D+LG +++H+ G S+G +
Sbjct: 92 ---SKYRTYAVDIIGDKNKSIPENVS-GTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLH 147
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+PERV S A+L+ L + ++ +
Sbjct: 148 TMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTAS------NGVETFLNWMMN- 200
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ I +++ G+ N + + T +++++ R
Sbjct: 201 ---------DQNVLHPIFVKQFKAGVMWQDGSRNP---NPNADGFPYVFTDEELRSARVP 248
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+ ++ G H+VI A A P + GH++S E+ VN+ ++
Sbjct: 249 ---ILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMR 302
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 5e-37
Identities = 55/307 (17%), Positives = 97/307 (31%), Gaps = 57/307 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I + R G GP ++ G+ + P + L+
Sbjct: 56 GRITLNVREKGSGPL-MLFFHGITSNSAVFEPLMIRLS---------------------- 92
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
A D RG G S P +T Y A D+ L+ L A + GHS+GA +
Sbjct: 93 -DRFTTIAVDQRGHGLSDKP--ETGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSV 149
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
AA P+ V S+ ++ T P ++ + L A+ + + Y
Sbjct: 150 TAAAKYPDLVRSVVAIDFT-------PYIETEALD-ALEARVNAGSQLFEDIKAVEAYLA 201
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS--A 260
+ R + +G Q DG + + + +RS
Sbjct: 202 GRYPNIPADAIRI----------RAESGYQ---PVDGGLRPLASSAAMAQTARGLRSDLV 248
Query: 261 GFL------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
V ++ G + + + P ++ +PG H V+ E +A
Sbjct: 249 PAYRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITLKA 307
Query: 314 LIDLIKA 320
+ + I A
Sbjct: 308 ITNFIDA 314
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-36
Identities = 64/301 (21%), Positives = 102/301 (33%), Gaps = 33/301 (10%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I+++Y G G V+LI G +W Q + L
Sbjct: 9 NSTPIELYYEDQGSGQP-VVLIHGYPLDGHSWERQTRELLA------------------- 48
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V +D RG G SS T Y A D+ +++ L + + G SMG
Sbjct: 49 ---QGYRVITYDRRGFGGSSKV--NTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGE 103
Query: 141 ACK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+ +A ERV LA L + E A D
Sbjct: 104 LARYVARYGHERVAKLAFLASLEPFLVQRD-----DNPEGVPQEVFDGIEAAAKGDRFAW 158
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
++ Y Y + + ++ V G + S + W+ D++ +R+
Sbjct: 159 FTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRS-DVEAVRA 217
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
AG ++HG D I I R + P A +++ G H + +EVN AL +
Sbjct: 218 AGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFL 277
Query: 319 K 319
Sbjct: 278 A 278
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-36
Identities = 58/305 (19%), Positives = 100/305 (32%), Gaps = 43/305 (14%)
Query: 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
+G +I+Y+ +G G ++ G D+W Q+ LA
Sbjct: 6 RDGTQIYYKDWGSGQP-IVFSHGWPLNADSWESQMIFLAA-------------------- 44
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
G V A D RG GRSS P + A D+ L++HL + A +FG S G
Sbjct: 45 --QGYRVIAHDRRGHGRSSQP--WSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEV 100
Query: 142 CKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ RV L++ R + R+ + D
Sbjct: 101 ARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLAS 160
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQTIR 258
+ G+ + ++ GM + G T +D++ I
Sbjct: 161 GPFFGFNQPGAKSSAGMVDW-----FWLQGMAA--GHKNAYDCIKAFSETDFTEDLKKID 213
Query: 259 SAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
V V+HG D + I + + L + + G H ++ +++N L+
Sbjct: 214 -----VPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL 268
Query: 316 DLIKA 320
IK
Sbjct: 269 AFIKG 273
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-36
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 45/306 (14%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I+I+Y +G G V+LI G + +W Q+ L
Sbjct: 13 NQAPIEIYYEDHGTGKP-VVLIHGWPLSGRSWEYQVPALVE------------------- 52
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V +D RG G+SS P Y D+ L++ L + + G SMG
Sbjct: 53 ---AGYRVITYDRRGFGKSSQP--WEGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGE 107
Query: 141 ACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDT 198
+ + +R+ + L A I F++ R A
Sbjct: 108 VARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLA----- 162
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQT 256
+ E+ + + + R ++ + + + G + T +KD++
Sbjct: 163 -FLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGA--SPKGTLDCITAFSKTDFRKDLEK 219
Query: 257 IRSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ +IHG D Y+ +L + P +++ + G H ++ +E N+A
Sbjct: 220 FN-----IPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEA 274
Query: 314 LIDLIK 319
L+ +K
Sbjct: 275 LLLFLK 280
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-36
Identities = 72/346 (20%), Positives = 112/346 (32%), Gaps = 53/346 (15%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+ V N I ++Y +G G V+LI G + +W Q L
Sbjct: 1 MPFITV-----------GQENSTSIDLYYEDHGTGVP-VVLIHGFPLSGHSWERQSAALL 48
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
AG V +D RG G+SS P T Y A D+ +
Sbjct: 49 D----------------------AGYRVITYDRRGFGQSSQP--TTGYDYDTFAADLNTV 84
Query: 121 MDHLGWKQAHVFGHSMGAMIACK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179
++ L + A + G SMG + +++ R+ ++A L
Sbjct: 85 LETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQE 144
Query: 180 -IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
A R A Y+ + + Y + +E V+ T +
Sbjct: 145 FFDGIVAAVKADRYAF-----YTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAA 199
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDL 296
W DI I V ++HG D I R+ K P A +++
Sbjct: 200 AAAPTTWYTDFRA-DIPRID-----VPALILHGTGDRTLPIENTARVFHKALPSAEYVEV 253
Query: 297 PG-GHLVSHERTEEVNQALID-LIKASEKKISPQDWTNLPQTSSVL 340
G H + EEVN AL+ L KA E + S++
Sbjct: 254 EGAPHGLLWTHAEEVNTALLAFLAKALEAQKQKLLTEVETYVLSII 299
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 3e-36
Identities = 49/315 (15%), Positives = 91/315 (28%), Gaps = 63/315 (20%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ + + G G ++ G W
Sbjct: 4 MTSILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFE------------------- 44
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI--MAKDVIALMDHLGWKQAHVFGHSMG 137
V FD G G S + + A+DV+ + + L K+ GHS+G
Sbjct: 45 ----EDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVG 100
Query: 138 AMIACKLAAMVPERVLSLALLNVTG----------GGFQCCPKLDLQTLSIAIRFFRAKT 187
A+I + PE L ++ + GGF + L L +
Sbjct: 101 ALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGF---EEEQLLGLLEMMEKNYIGW 157
Query: 188 PEKRAAVDLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWM 246
AA L+ E EE ++ +++ K + +
Sbjct: 158 ATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHRE------------- 204
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
D+ + ++ D+IA + + + L P + + + GH
Sbjct: 205 ------DLSKVTVP---SLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPHMS 254
Query: 306 RTEEVNQALIDLIKA 320
+E Q + D +KA
Sbjct: 255 HPDETIQLIGDYLKA 269
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 5e-36
Identities = 63/317 (19%), Positives = 100/317 (31%), Gaps = 70/317 (22%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G++IFY+ +G+G V+ I G DAW QLK +
Sbjct: 7 DGVEIFYKDWGQGRP-VVFIHGWPLNGDAWQDQLKAVVD--------------------- 44
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG A D RG G S+ Y A D+ L+ L + + HSMG
Sbjct: 45 -AGYRGIAHDRRGHGHSTPV--WDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELA 101
Query: 143 KLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+ R+ S LL+ A P +
Sbjct: 102 RYVGRHGTGRLRSAVLLS-------------------------AIPPVMIKSDKNPDGVP 136
Query: 202 QEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
E + G T R+ +++ +G + N G A W M Q +R
Sbjct: 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCV 196
Query: 261 GFLVS---------------VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHL--V 302
V+HG D + I R + ++ P A + G H +
Sbjct: 197 DAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAM 256
Query: 303 SHERTEEVNQALIDLIK 319
E+ N+ L++ +
Sbjct: 257 VPGDKEKFNRDLLEFLN 273
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 8e-36
Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 46/302 (15%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
K+ Y R ++L+ G H + ++ L
Sbjct: 12 FDNKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELD-------------------- 51
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
A V + RG G S V ++ + KD + ++D LG + HS G +
Sbjct: 52 ---ADFRVIVPNWRGHGLSPSEV--PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWV 106
Query: 141 ACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+L PER +++ A K PE+
Sbjct: 107 LVELLEQAGPERAPRGIIMDWLMWA---------PKPDFAKSLTLLKDPERW-------R 150
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
L + + ++ ++ G I + + + +
Sbjct: 151 EGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLT 210
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
+ I + AE+ P L G H + + + + +
Sbjct: 211 KTRPIRHIFSQPTEPEYEKINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFA 269
Query: 319 KA 320
A
Sbjct: 270 TA 271
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 1e-35
Identities = 61/304 (20%), Positives = 105/304 (34%), Gaps = 45/304 (14%)
Query: 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
+G +I+++ +G G V+ G D W Q++ L+
Sbjct: 6 KDGTQIYFKDWGSGKP-VLFSHGWLLDADMWEYQMEYLSS-------------------- 44
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
G AFD RG GRS P T A D+ L++HL K+ + G SMG
Sbjct: 45 --RGYRTIAFDRRGFGRSDQP--WTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDV 100
Query: 142 CK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ +A RV L LL F P F+ + + RA +
Sbjct: 101 ARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ------F 154
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQTIR 258
++ + G + + ++ Q + + + T + D+ I
Sbjct: 155 ISDFNAPFYGIN-KGQVVSQGVQTQTLQIALLA--SLKATVDCVTAFAETDFRPDMAKID 211
Query: 259 SAGFLV--SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
V VIHG D I ++A +L A + H + +++N+ L+
Sbjct: 212 -----VPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL 266
Query: 316 DLIK 319
+K
Sbjct: 267 AFLK 270
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-35
Identities = 63/321 (19%), Positives = 115/321 (35%), Gaps = 56/321 (17%)
Query: 21 NDNGIKIFYR----TYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDS 76
+ + Y G T ++L+ G W + LA
Sbjct: 28 QGQPLSMAYLDVAPKKANGRT-ILLMHGKNFCAGTWERTIDVLAD--------------- 71
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM 136
AG V A D G +SS P +Y+ + +A + AL++ LG +A V GHSM
Sbjct: 72 -------AGYRVIAVDQVGFCKSSKPAH-YQYSFQQLAANTHALLERLGVARASVIGHSM 123
Query: 137 GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
G M+A + A + P +V L L+N G + +++ R + E
Sbjct: 124 GGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQ 183
Query: 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256
T+Y+ E+ E+ +A +Y+ + A Y + ++
Sbjct: 184 ATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTY-------DMIFTQPVVYELDR 236
Query: 257 IRSAGFLVSVIHGRHDVIA----------------QICYARRLAEKLYPVARMIDLPG-G 299
++ L ++ G D A + A ++ P A +++ P G
Sbjct: 237 LQ-MPTL--LLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI-PQATLVEFPDLG 292
Query: 300 HLVSHERTEEVNQALIDLIKA 320
H + E +QAL++ ++
Sbjct: 293 HTPQIQAPERFHQALLEGLQT 313
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 3e-35
Identities = 67/306 (21%), Positives = 97/306 (31%), Gaps = 45/306 (14%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G IFY+ +G G V+ G + D W Q+
Sbjct: 7 DGTNIFYKDWGPRDGLP-VVFHHGWPLSADDWDNQMLFFLS------------------- 46
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM-GAM 139
G V A D RG GRS P T + A DV AL + L + A GHS G
Sbjct: 47 ---HGYRVIAHDRRGHGRSDQP--STGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGE 101
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A +A P RV L++ FRA RA +D
Sbjct: 102 VARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVP 161
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC--WMHKMTQKDIQTI 257
Y G + A + Q + GM + + D++ I
Sbjct: 162 SGPFY-----GFNREGATVSQGLIDHWWLQGMMG--AANAHYECIAAFSETDFTDDLKRI 214
Query: 258 RSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314
V V HG D + A + +L A + G H + E +N L
Sbjct: 215 D-----VPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDL 269
Query: 315 IDLIKA 320
+ +K+
Sbjct: 270 LAFVKS 275
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 9e-35
Identities = 67/318 (21%), Positives = 99/318 (31%), Gaps = 69/318 (21%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G++IFY+ +G P + G + D W QL
Sbjct: 8 DGVQIFYKDWGPRDAPV-IHFHHGWPLSADDWDAQLLFFLA------------------- 47
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V A D RG GRSS + A DV A++ HLG + A GHS G
Sbjct: 48 ---HGYRVVAHDRRGHGRSSQV--WDGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGE 102
Query: 141 ACKLAAMVPE-RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+ A PE +V L+ P L +QT ++ +A V +
Sbjct: 103 VVRYMARHPEDKVAKAVLIAAV-------PPLMVQTPGNPGGLPKSVFDGFQAQVASN-- 153
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKG-ISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
RA Y++ G +G I W M
Sbjct: 154 ---------------RAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYD 198
Query: 259 SAGFL---------------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302
V V+HG D I + L+ KL P + G H +
Sbjct: 199 GIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGM 258
Query: 303 SHERTEEVNQALIDLIKA 320
+ +N L+ I++
Sbjct: 259 PTTHADVINADLLAFIRS 276
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-34
Identities = 53/310 (17%), Positives = 108/310 (34%), Gaps = 54/310 (17%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G +I ++G P V+ I G+ AW LA
Sbjct: 12 GGNQICLCSWGSPEHPV-VLCIHGILEQGLAWQEVALPLAA------------------- 51
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V A D G GRSS T Y++ + ++ L + + GHSMGAM+
Sbjct: 52 ---QGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAML 108
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD--- 197
A +A++ P+++ L L+ + + + + L+ + + TP+ D+
Sbjct: 109 ATAIASVRPKKIKELILVELPLPAEESKKESAVNQLT-TCLDYLSSTPQHPIFPDVATAA 167
Query: 198 -------THYSQEYLEEYVGSSTRRAI-----LYQEYVKGISATGMQSNYGFDGQIHACW 245
S+E+ T+ + ++ S G+ + G Q
Sbjct: 168 SRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML 227
Query: 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHE 305
++I+ ++++G + + ++ A+ + L GGH + +
Sbjct: 228 ---------KSIQVP---TTLVYGDSSKLNRPEDLQQQKM-TMTQAKRVFLSGGHNLHID 274
Query: 306 RTEEVNQALI 315
+ ++
Sbjct: 275 AAAALASLIL 284
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-34
Identities = 64/317 (20%), Positives = 106/317 (33%), Gaps = 52/317 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ +IF R G GP ++L+ G TH W LA
Sbjct: 21 SSGRIFARVGGDGPP-LLLLHGFPQTHVMWHRVAPKLA---------------------- 57
Query: 83 GAGIEVCAFDNRGMGRSSVP---VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+V D G G S +P + T YT + MAK +I M+ LG + GH+ GA
Sbjct: 58 -ERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGAR 116
Query: 140 IACKLAAMVPERVLSLALLNV--TGGGFQCC-PKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
++ +LA P R+ LA+L++ T +Q L+ + A PE D
Sbjct: 117 VSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGD- 175
Query: 197 DTHYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYGFDGQIHA-C----WMHK 248
Y + L + + A + Y + H C
Sbjct: 176 PDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMR---------RHVMCEDYRAGAY 226
Query: 249 MTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH 304
+ + AG + V + G + + K + + GH +
Sbjct: 227 ADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPIESGHFLPE 286
Query: 305 ERTEEVNQALIDLIKAS 321
E ++ +AL+ A+
Sbjct: 287 EAPDQTAEALVRFFSAA 303
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 46/298 (15%), Positives = 103/298 (34%), Gaps = 36/298 (12%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
++I + G+G V+L+ G W + + +
Sbjct: 21 AGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVE---------------- 64
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V D G G+S V + + + A+ + +++D L + H+ G+SMG
Sbjct: 65 ---AGYRVILLDCPGWGKSDSVVN-SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHS 120
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ PERV L L+ GG + + + + +R T E + +
Sbjct: 121 SVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVF 180
Query: 201 SQEYL-EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
L + + + +++++ + +++N + ++ +
Sbjct: 181 DTSDLTDALFEARLNNMLSRRDHLENFVKS-LEANPKQFPDFGPR-LAEIKAQ------- 231
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++ GR+D + RL + + + GH E + NQ +++
Sbjct: 232 ----TLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGHWAQWEHADAFNQLVLN 284
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 4e-34
Identities = 53/312 (16%), Positives = 103/312 (33%), Gaps = 63/312 (20%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
G G V+L G + W L L
Sbjct: 19 NNINITGGGEKTVLLAHGFGCDQNMWRFMLPELE-----------------------KQF 55
Query: 87 EVCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
V FD G G+S + T+ + + AKDV ++ L + GHS+ ++IA
Sbjct: 56 TVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIA 115
Query: 145 AAMVPERVLSLALLNVTG----------GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194
+ V +R+ + ++ + GGF + DL+ L + A +
Sbjct: 116 STHVGDRISDITMICPSPCFMNFPPDYVGGF---ERDDLEELINLMDKNYIGWANYLAPL 172
Query: 195 DLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
+ +S E + E GS I+ + + K + +S
Sbjct: 173 VMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRS-------------------L 213
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
++ I + + D +A + +AE + P +++ + GH + +
Sbjct: 214 LEDISTP---ALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDAGLITP 269
Query: 313 ALIDLIKASEKK 324
LI I+ ++ +
Sbjct: 270 LLIHFIQNNQTR 281
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 7e-34
Identities = 65/325 (20%), Positives = 102/325 (31%), Gaps = 55/325 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ I G GP ++L+ G W LA
Sbjct: 13 GDVTINCVVGGSGPA-LLLLHGFPQNLHMWARVAPLLA---------------------- 49
Query: 83 GAGIEVCAFDNRGMGRSSVP---VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V D RG G SS P Y+ + MA D LM LG+++ H+ GH+ G
Sbjct: 50 -NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGR 108
Query: 140 IACKLAAMVPERVLSLALLNV--TGGGFQCCPKLDLQTL-SIAIRFFRAKTPEKRAAVDL 196
++A P+ VLSLA+L++ T F+ + + A PEK D
Sbjct: 109 TGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADP 168
Query: 197 DTHYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYGFDGQIHA-C----WMHK 248
DT Y G++ +EY K IH C
Sbjct: 169 DTFYEGCLFGW--GATGADGFDPEQLEEYRKQWRDPAA---------IHGSCCDYRAGGT 217
Query: 249 MTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH 304
+ + G V G ++ + + + R LPGGH
Sbjct: 218 IDFELDH--GDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASLPGGHFFVD 275
Query: 305 ERTEEVNQALIDLIKASEKKISPQD 329
++ + L + + + I +
Sbjct: 276 RFPDDTARILREFLSDARSGIHQTE 300
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-33
Identities = 56/303 (18%), Positives = 103/303 (33%), Gaps = 45/303 (14%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ I Y G G T VI++ G W + +
Sbjct: 18 KGFSDFNIHYNEAGNGET-VIMLHGGGPGAGGWSNYYRNVGPFVD--------------- 61
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
AG V D+ G +S V E + A+ V LMD L +AH+ G++MG
Sbjct: 62 ----AGYRVILKDSPGFNKSDAVVM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGA 116
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK-RAAVDL-- 196
A A P+R+ L L+ G G + ++ + + + + + E + + +
Sbjct: 117 TALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFL 176
Query: 197 --DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
+ ++E L+ + R+ N+ Q +T +
Sbjct: 177 YDQSLITEELLQGRWEAIQRQP-------------EHLKNFLISAQKAPLSTWDVT-ARL 222
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
I++ + GR D + + +L + AR+ G E +E N+
Sbjct: 223 GEIKAK---TFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHADEFNRL 278
Query: 314 LID 316
+ID
Sbjct: 279 VID 281
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 1e-33
Identities = 60/303 (19%), Positives = 105/303 (34%), Gaps = 56/303 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G+ Y G G VILI G + W + L+
Sbjct: 13 AGVLTNYHDVGEGQP-VILIHGSGPGVSAYANWRLTIPALS------------------- 52
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D G G + P Y+ +I +MD L ++AH+ G++ G
Sbjct: 53 ----KFYRVIAPDMVGFGFTDRPEN-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGG 107
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK-RAAVDL-- 196
+A A ERV + L+ G F L+ + + E R +D+
Sbjct: 108 LAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAV-------WGYTPSIENMRNLLDIFA 160
Query: 197 --DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
+ + E +S + +QE + Q + +DI
Sbjct: 161 YDRSLVTDELARLRYEASIQPG--FQESFSSMFPEPRQRWID---------ALASSDEDI 209
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+T+ + +IHGR D + + + RL E + A++ GH E+T+ N+
Sbjct: 210 KTLPNE---TLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRL 265
Query: 314 LID 316
+++
Sbjct: 266 VVE 268
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-33
Identities = 48/311 (15%), Positives = 99/311 (31%), Gaps = 62/311 (19%)
Query: 24 GIKIFYRTY----GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G Y+ Y ++ + G + ++
Sbjct: 1 GHMTHYKFYEANVETNQV-LVFLHGFLSDSRTYHNHIEKFT------------------- 40
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V D G G + +T + + + ++D K +FG+SMG
Sbjct: 41 ----DNYHVITIDLPGHGEDQSSMDET-WNFDYITTLLDRILDKYKDKSITLFGYSMGGR 95
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A A + +L L + T G + A + R + RA V
Sbjct: 96 VALYYAINGHIPISNLILES-TSPGIK----------EEANQLERRLVDDARAKV----- 139
Query: 200 YSQEYLEEYVGSSTRRAI------LYQEYVKGISATGM-QSNYGFDGQIHACWMHKMT-- 250
+E +V + + L E I + QS + + +M
Sbjct: 140 LDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNL 199
Query: 251 QKDIQTIRSAGFLVSVIHGRHD-VIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308
++ I+ ++ G +D QI A+++A + P ++ + GH + E ++
Sbjct: 200 WPRLKEIKVP---TLILAGEYDEKFVQI--AKKMANLI-PNSKCKLISATGHTIHVEDSD 253
Query: 309 EVNQALIDLIK 319
E + ++ +K
Sbjct: 254 EFDTMILGFLK 264
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-32
Identities = 60/316 (18%), Positives = 105/316 (33%), Gaps = 56/316 (17%)
Query: 20 LNDNGIKIFYRTYGR--GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQ 74
+ G P V+L+ G A W P + LA
Sbjct: 12 FPSGTLASHALVAGDPQSPA-VVLLHGAGPGAHAASNWRPIIPDLA-------------- 56
Query: 75 DSVESGDGGAGIEVCAFDNRGMGRSSVPV---KKTEYTTKIMAKDVIALMDHLGWKQAHV 131
V A D G G+S P + + ++ LM+H G +++H+
Sbjct: 57 ---------ENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHI 107
Query: 132 FGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK- 190
G+SMG + +L PER +AL+ G L+ + F+
Sbjct: 108 VGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN----ARPPELARLLAFYADPRLTPY 163
Query: 191 RAAVDLDTH--YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW--M 246
R + + + +EE V +R + V+ I +S + +
Sbjct: 164 RELIHSFVYDPENFPGMEEIV--KSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATL 221
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
++ V V HGR D I + + L + L A ++ L GH E
Sbjct: 222 GRLPHD-----------VLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLE 269
Query: 306 RTEEVNQALIDLIKAS 321
R + + L++ +A+
Sbjct: 270 RWDAMGPMLMEHFRAA 285
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-32
Identities = 56/315 (17%), Positives = 92/315 (29%), Gaps = 54/315 (17%)
Query: 23 NGIKIFYRTYGRGP-----TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSV 77
+ + + +I++ G G + + LA
Sbjct: 36 GDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADE--------------- 80
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHS 135
G V +D G G S+ +T ++ + A+ LG ++ HV G S
Sbjct: 81 ------TGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQS 134
Query: 136 MGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD 195
G M+ ++A P ++SLA+ N A E RAA+D
Sbjct: 135 WGGMLGAEIAVRQPSGLVSLAICNSPASMR--------LWSEAAGDLRAQLPAETRAALD 186
Query: 196 --------LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247
Y Q E Y R Q++ ++ + +
Sbjct: 187 RHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246
Query: 248 KMTQKDIQTIRSAGFL---VSVIHGRHDVIAQICY--ARRLAEKLYPVARMIDLPG-GHL 301
T D I + V VI G HD + + + P R PG H
Sbjct: 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDE---ATPKTWQPFVDHI-PDVRSHVFPGTSHC 302
Query: 302 VSHERTEEVNQALID 316
E+ EE +
Sbjct: 303 THLEKPEEFRAVVAQ 317
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-32
Identities = 66/314 (21%), Positives = 105/314 (33%), Gaps = 60/314 (19%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+I G G ++L+ G TH W LA
Sbjct: 13 TEARINLVKAGHGAP-LLLLHGYPQTHVMWHKIAPLLA---------------------- 49
Query: 83 GAGIEVCAFDNRGMGRSSVPV---KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D RG G SS P Y+ ++MA+D + +M LG++Q +V GH GA
Sbjct: 50 -NNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGAR 108
Query: 140 IACKLAAMVPERVLSLALLNV--TGGGFQCCPKLDLQTLSIAIRFF-RAKTPEKRAAVDL 196
+A +LA P RV LALL++ T ++ + PE +
Sbjct: 109 VAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETLIGANP 168
Query: 197 DTHYSQEYLEEYVGSSTRRAIL-----YQEYVKGIS----ATGM----QSNYGFDGQIHA 243
+ YL + + + EY++ S ++ D +
Sbjct: 169 E-----YYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDE 223
Query: 244 CWM-HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLV 302
M K++ V V+ G +I + + LP GH +
Sbjct: 224 LDMKQKISCP-----------VLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLPCGHFL 272
Query: 303 SHERTEEVNQALID 316
E EE QA+ +
Sbjct: 273 PEEAPEETYQAIYN 286
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-31
Identities = 39/307 (12%), Positives = 82/307 (26%), Gaps = 47/307 (15%)
Query: 22 DNGIKIFYRTYGRGPTKVILIT--GLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ + Y + G + ++ G T D + + L
Sbjct: 27 NTLLGPIYTCHREGNPCFVFLSGAGFFSTADNFANIIDKLP------------------- 67
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
I + D G S V + + ++ + +H ++ + HS+G
Sbjct: 68 ----DSIGILTIDAPNSGYSPVS-NQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGF 122
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
A ++ + L L T +A+R + KT R
Sbjct: 123 AALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRL------- 175
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH---KMTQKDIQT 256
YL++ R+ + K + + + ++D +T
Sbjct: 176 ---NYLKDLS-----RSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKT 227
Query: 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALID 316
S V Y + ++I H + T + + +
Sbjct: 228 GISEKIPSIVFSESFREKE---YLESEYLNKHTQTKLILCGQHHYLHWSETNSILEKVEQ 284
Query: 317 LIKASEK 323
L+ EK
Sbjct: 285 LLSNHEK 291
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-31
Identities = 60/299 (20%), Positives = 93/299 (31%), Gaps = 56/299 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G I + G GP V+L+ G T P + LA
Sbjct: 11 DGTPIAFERSGSGPP-VVLVGGALSTRAGGAPLAERLA---------------------- 47
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
V +D RG G S Y + +D+ A++D G A VFG S GA ++
Sbjct: 48 -PHFTVICYDRRGRGDSGDT---PPYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLS- 101
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
LAA + LA+ P + + + A
Sbjct: 102 LLAAASGLPITRLAVF---------EPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVT 152
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH--KMTQKDIQTIRSA 260
++ E VG + V + M G + H M I T R A
Sbjct: 153 YFMTEGVGVP-------PDLVAQMQQAPMWP--GMEAVAHTLPYDHAVMGDNTIPTARFA 203
Query: 261 GFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+ V+ G A+ LA+ + P AR + L H + + L++
Sbjct: 204 SISIPTLVMDGGASPAWIRHTAQELADTI-PNARYVTLENQTHT---VAPDAIAPVLVE 258
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-31
Identities = 59/314 (18%), Positives = 99/314 (31%), Gaps = 53/314 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+KI Y G GPT ++L+ G G W + LA
Sbjct: 17 PDVKIHYVREGAGPT-LLLLHGWPGFWWEWSKVIGPLA---------------------- 53
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKT--EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+V D RG G S P +Y+ A D AL+D LG ++A+V GH A++
Sbjct: 54 -EHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIV 112
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDTH 199
K +RV+ A+ + F +F + + +
Sbjct: 113 LHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSRE-- 170
Query: 200 YSQEYLEEYVGS-STRRAIL----YQEYVKGIS----ATGM----QSNYGFDGQIHACWM 246
++Y + + S R +L + +V G ++N D +
Sbjct: 171 VCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLD 230
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
H M+ + +I G D K Y M + GH + E
Sbjct: 231 HTMSDLPVT----------MIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVE 280
Query: 306 RTEEVNQALIDLIK 319
+ E + +
Sbjct: 281 KPEIAIDRIKTAFR 294
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-31
Identities = 46/307 (14%), Positives = 87/307 (28%), Gaps = 58/307 (18%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
NG + Y G PT + L++G H + LA
Sbjct: 7 NGTLMTYSESGDPHAPT-LFLLSGWCQDHRLFKNLAPLLA-------------------- 45
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V D RG ++ ++ +A+D++A +D G + + S G +
Sbjct: 46 ---RDFHVICPDWRGHDAKQTDS--GDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWV 100
Query: 141 ACKLAAMV-PERVLSLALLNVTGGG-----FQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194
+ + R+ +++ Q + F + E
Sbjct: 101 NIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNA 160
Query: 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
D+ H + + G +RA +++NY G M + QK
Sbjct: 161 DVLNHLR-NEMPWFHGEMWQRACR-----------EIEANYRTWGSPLD-RMDSLPQKPE 207
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ + + +PG H S E V QA
Sbjct: 208 I----------CHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQA 257
Query: 314 LIDLIKA 320
+ + ++A
Sbjct: 258 IREFLQA 264
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 6e-31
Identities = 47/295 (15%), Positives = 97/295 (32%), Gaps = 44/295 (14%)
Query: 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
I+++T G+G ++L+ G + W + L+ +
Sbjct: 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-----------------------SH 39
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
+ D G GRS + D+ + +A G S+G ++A ++A
Sbjct: 40 FTLHLVDLPGFGRSRGF---GALS----LADMAEAVLQQAPDKAIWLGWSLGGLVASQIA 92
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PERV +L + + F + + F + + +++ V+ +
Sbjct: 93 LTHPERVRALVTVA-SSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVE------RFLA 145
Query: 206 EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265
+ +G+ T R + K + A M +G + + Q +Q + FL
Sbjct: 146 LQTMGTETARQ-DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ-PLQNVS-MPFL-- 200
Query: 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++G D + L + P + H E L+ L +
Sbjct: 201 RLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 9e-31
Identities = 47/299 (15%), Positives = 91/299 (30%), Gaps = 43/299 (14%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+++ G GP +L G G L+
Sbjct: 11 GEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYL-------------------- 50
Query: 81 DGGAGIEVCAFDNRGMGRSS-VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
G V FD RG GRS +P +T + +D + L + LG ++ + H GA+
Sbjct: 51 ---EGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAV 107
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A ++ P+ ++ L + + + A L
Sbjct: 108 VALEVLRRFPQAEGAILLAPWVNFP----WLAARLAEAAGLAPLPDPEENLKEA--LKRE 161
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI-QTIR 258
+ + + + R + Y+ +G G D A + + + D +
Sbjct: 162 EPKALFDRLMFPTPRGRMAYEWLAEGAGILGS------DAPGLAFLRNGLWRLDYTPYLT 215
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+ V+ G D + + A + LP GH + + E +A +
Sbjct: 216 PERRPLYVLVGERDGTSYPYAEEVASR---LRAPIRVLPEAGHYLWIDAPEAFEEAFKE 271
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-30
Identities = 38/303 (12%), Positives = 86/303 (28%), Gaps = 69/303 (22%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+ + Y G + ++ + G +G K L +
Sbjct: 1 SNAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFGELEKYLEDYN----------------- 43
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSM 136
D +G G S T Y +V + + K + G+SM
Sbjct: 44 -------CILLDLKGHGESKGQCPSTVYG---YIDNVANFITNSEVTKHQKNITLIGYSM 93
Query: 137 GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
G I +A V + L+ G F + ++
Sbjct: 94 GGAIVLGVALKKLPNVRKVVSLS-GGARF---------------------DKLDKDFMEK 131
Query: 197 --DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
YL E +G L ++Y + + + AC + + ++
Sbjct: 132 IYHNQLDNNYLLECIGGIDN--PLSEKYFETLEK----DPDIMINDLIACKLIDLV-DNL 184
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ I V I + +++ + Y+ + +++ + + H + + V +
Sbjct: 185 KNIDIP---VKAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKHFLLVVNAKGVAEE 240
Query: 314 LID 316
+ +
Sbjct: 241 IKN 243
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-29
Identities = 52/304 (17%), Positives = 104/304 (34%), Gaps = 47/304 (15%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G+++ +R Y ++ V+ + GL + LA
Sbjct: 14 DGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLA-------------------- 53
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V + RG G S Y +D+ AL+ G ++ G S+G ++
Sbjct: 54 ---GDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLL 110
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
LAA P R+ + L +V P++ + L IR + + +
Sbjct: 111 TMLLAAANPARIAAAVLNDVG-------PEVSPEGLE-RIRGYVGQGRNFETWMHAARAL 162
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATG-------MQSNYGFDGQIHACWMHKMTQKD 253
+ + Y + + Y + + + ++G M+ F+ + A M
Sbjct: 163 QESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWP-L 221
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
+ + L V+ G I A ++A + P ++ LP GH + + E +
Sbjct: 222 FDALATRPLL--VLRGETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESIA- 276
Query: 313 ALID 316
A+
Sbjct: 277 AIGR 280
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 1e-27
Identities = 52/304 (17%), Positives = 93/304 (30%), Gaps = 60/304 (19%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G++ Y G+G VILI G + W + LA
Sbjct: 24 GGVETRYLEAGKGQP-VILIHGGGAGAESEGNWRNVIPILA------------------- 63
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGA 138
V A D G G+++ P EYT + + + + + + G+SMG
Sbjct: 64 ----RHYRVIAMDMLGFGKTAKPD--IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGG 117
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK-----RAA 193
++ + E V +L L+ G + L T E +A
Sbjct: 118 ATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRP-------IINYDFTREGMVHLVKAL 170
Query: 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
+ + +T A + YV + Q +D ++ K+
Sbjct: 171 TNDGFKIDDAMINSRYTYATDEATR-KAYVATMQWIREQGGLFYD----PEFIRKVQVP- 224
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
V+ G+ D + + A + + L + +P GH E E+
Sbjct: 225 ----------TLVVQGKDDKVVPVETAYKFLD-LIDDSWGYIIPHCGHWAMIEHPEDFAN 273
Query: 313 ALID 316
A +
Sbjct: 274 ATLS 277
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-26
Identities = 53/316 (16%), Positives = 97/316 (30%), Gaps = 60/316 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G+K+ Y G+GP V+L+ G T W + LA
Sbjct: 18 DGVKLHYVKGGQGPL-VMLVHGFGQTWYEWHQLMPELA---------------------- 54
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIA 141
V A D G+G+S P KT Y+ + +A + L + + H +G
Sbjct: 55 -KRFTVIAPDLPGLGQSEPP--KTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNT 111
Query: 142 CKLAAMVPERVLSLALLNVT--GGGFQCCPKLDLQTLSIA--IRFF--RAKTPEKRAAVD 195
+ + L + P Q S+ FF + E A
Sbjct: 112 YPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGK 171
Query: 196 LDTHYSQEYLEEYVGS-STRRAIL----YQEYVKGISATGMQSNYGFDGQIHA-C-WMHK 248
+LE ++ S ++ + Y + + ++A +
Sbjct: 172 ER-----FFLEHFIKSHASNTEVFSERLLDLYARSYAKPHS---------LNASFEYYRA 217
Query: 249 MTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVS 303
+ + Q A + + + G ++ V LPG GH +
Sbjct: 218 LNESVRQNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAEDV-EGHVLPGCGHWLP 276
Query: 304 HERTEEVNQALIDLIK 319
E +N+ +ID +
Sbjct: 277 EECAAPMNRLVIDFLS 292
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 2e-26
Identities = 60/303 (19%), Positives = 102/303 (33%), Gaps = 46/303 (15%)
Query: 22 DNGIKIFYRTYGRGPTK-VILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSV 77
D +K+ Y G G + V+L+ G + + + LA
Sbjct: 21 DGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLA----------------- 63
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMG 137
V A D G G S + + A + L D LG + + G+++G
Sbjct: 64 ------RHFHVLAVDQPGYGHSDKRAE-HGQFNRYAAMALKGLFDQLGLGRVPLVGNALG 116
Query: 138 AMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD 197
A + A P R L L+ G + + +F A T E A
Sbjct: 117 GGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRV 176
Query: 198 THYSQEYL-EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW--MHKMTQKDI 254
Y + + E V R A+ + +S G D + W ++++ Q
Sbjct: 177 MVYDKNLITPELVD--QRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQP-- 232
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
V +I GR D + + A + + P A++ GH V E+ +E N+
Sbjct: 233 ---------VLLIWGREDRVNPLDGALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKL 282
Query: 314 LID 316
I+
Sbjct: 283 TIE 285
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-26
Identities = 50/298 (16%), Positives = 92/298 (30%), Gaps = 49/298 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
N + ++L+ GL G+ D G + L
Sbjct: 4 NIRAQTAQNQHNNSP-IVLVHGLFGSLDNLGVLARDLV---------------------- 40
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
+ D R G S ++ MA+D++ +D L +A GHSMG
Sbjct: 41 -NDHNIIQVDVRNHGLSP---REPVMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVM 96
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
L A+ P+R+ L +++ + + AI + R
Sbjct: 97 ALTALAPDRIDKLVAIDIAPVDY---HVRRHDEIFAAINAVSESDAQTRQQAA------- 146
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ +++ L + +V G + + + H + + I
Sbjct: 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPV-------LWDQYPHIVGWEKIPAWDHP-- 197
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
I G + Y L +P AR + G GH V E+ + V +A+ +
Sbjct: 198 -ALFIPGGNSPYVSEQYRDDLL-AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 8e-26
Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 59/317 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G I Y G G V+ + G + W + +
Sbjct: 17 EGATIAYVDEGSGQP-VLFLHGNPTSSYLWRNIIPYVVA--------------------- 54
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG A D GMG S+ P EY + + +D LG + H G++I
Sbjct: 55 -AGYRAVAPDLIGMGDSAKP--DIEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGM 111
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY-- 200
+ A + P+RV ++A + P + + F +T + + LD ++
Sbjct: 112 RHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFV 171
Query: 201 -------------SQEYLEEYV----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243
S+ + Y +R L ++ + + G + + +
Sbjct: 172 ETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTL--QWPREVPIGGEPAFAEAEVLKNG 229
Query: 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302
W+ L + H +A L + P + + H +
Sbjct: 230 EWLMASPIP---------KL--LFHAEPGALAPKPVVDYL-SENVPNLEVRFVGAGTHFL 277
Query: 303 SHERTEEVNQALIDLIK 319
+ + Q + D ++
Sbjct: 278 QEDHPHLIGQGIADWLR 294
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 53/324 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+++ + G GP V L G + +W Q+ LA
Sbjct: 246 PRVRLHFVELGSGPA-VCLCHGFPESWYSWRYQIPALAQ--------------------- 283
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V A D +G G SS P + EY +++ K+++ +D LG QA GH G M+
Sbjct: 284 -AGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVW 342
Query: 143 KLAAMVPERVLSLALLNV--TGGGFQCCPKLDLQTLSIA--IRFFRA-KTPEKRAAVDLD 197
+A PERV ++A LN P ++ + +F+ E +L
Sbjct: 343 YMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLS 402
Query: 198 TH-----YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY------------GFDGQ 240
+ + + L+ + S + M + GF G
Sbjct: 403 RTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGP 462
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDL 296
++ W M + +S G + + + D + ++ + E P + +
Sbjct: 463 LN--WYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHM-EDWIPHLKRGHI 519
Query: 297 PG-GHLVSHERTEEVNQALIDLIK 319
GH ++ EVNQ LI +
Sbjct: 520 EDCGHWTQMDKPTEVNQILIKWLD 543
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 97.1 bits (241), Expect = 2e-23
Identities = 41/307 (13%), Positives = 79/307 (25%), Gaps = 56/307 (18%)
Query: 26 KIFYRTYGRGPTK---VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ + YG K + + + + L + +
Sbjct: 22 SVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFV------------ 69
Query: 83 GAGIEVCAFDNRGMGR--SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
D GM P+ + +A + ++ +L + G GA I
Sbjct: 70 -----RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYI 124
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD--LDT 198
+ A P+ V L L+N+ T + D L
Sbjct: 125 LSRYALNHPDTVEGLVLINIDPNAK-----------GWMDWAAHKLTGLTSSIPDMILGH 173
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
+SQE L + L Q+Y I N W ++D+ R
Sbjct: 174 LFSQEELS-------GNSELIQKYRGIIQHAPNLENI------ELYWNSYNNRRDLNFER 220
Query: 259 SAGFLVS----VIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQ 312
+ ++ G KL P + + G + ++ +
Sbjct: 221 GGETTLKCPVMLVVGDQAPHEDA--VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 278
Query: 313 ALIDLIK 319
A ++
Sbjct: 279 AFKYFLQ 285
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 4e-23
Identities = 42/307 (13%), Positives = 83/307 (27%), Gaps = 50/307 (16%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G+++ Y G + + + G + L
Sbjct: 31 EGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTA------------------- 71
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V A D G GRS P YT + ++A +D L ++ + G ++
Sbjct: 72 ---AGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGIL 128
Query: 141 ACKLAAMVPERVLSLALLNVT-------GGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193
L P+ V L ++N G GF+ + + + +
Sbjct: 129 GLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITD 188
Query: 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
++ Y + G + + + + T Q + W + +
Sbjct: 189 AEVA-----AYDAPFPGPEFKAGVR--RFPAIVPITPDMEGAEIGRQAMSFWSTQWSGP- 240
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
+ G D + L + + + + GH V
Sbjct: 241 --------TF--MAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARA 290
Query: 313 ALIDLIK 319
AL +
Sbjct: 291 ALAAFGQ 297
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 5e-23
Identities = 52/306 (16%), Positives = 97/306 (31%), Gaps = 60/306 (19%)
Query: 29 YRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88
Y++ GP ++L+ G + +W + +
Sbjct: 32 YKSGSEGPV-LLLLHGGGHSALSWAVFTAAIISR---------------------VQCRI 69
Query: 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLA 145
A D R G + V + + + MAKDV +++ + + GHSMG IA A
Sbjct: 70 VALDLRSHGETKVK-NPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTA 128
Query: 146 AM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
+ + +L L +++V + L+ F R P+ +++
Sbjct: 129 SSNLVPSLLGLCMIDVV-------EGTAMDALNSMQNFLRG-RPKTFKSLE-------NA 173
Query: 205 LEEYVGSSTRRAIL-----YQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR- 258
+E V S R + VK D T+K
Sbjct: 174 IEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFR 233
Query: 259 --SAGFL-----VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEV 310
S FL ++ D + + ++ +M LP GH V + ++V
Sbjct: 234 GLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQ----GKFQMQVLPQCGHAVHEDAPDKV 289
Query: 311 NQALID 316
+A+
Sbjct: 290 AEAVAT 295
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 9e-23
Identities = 55/311 (17%), Positives = 96/311 (30%), Gaps = 53/311 (17%)
Query: 23 NGIKIFYRTYG--RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
NGI I+Y+ K++ + G G + L+ +
Sbjct: 13 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK------------------- 53
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAM 139
GI V +D G GRS P + +++T ++ AL L G ++ + G S G
Sbjct: 54 ---EGITVLFYDQFGCGRSEEPDQ-SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGA 109
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV----- 194
+A A + + L + T+ R + R A+
Sbjct: 110 LALAYAVKYQDHLKGLIVSGGLSSVP--------LTVKEMNRLIDELPAKYRDAIKKYGS 161
Query: 195 ---DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251
+ Y + Y R E +K + ++ Y + T
Sbjct: 162 SGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRI-MNGPNEFTITGTI 220
Query: 252 KDIQTIRSAGFL---VSVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSHE 305
KD + + G +D + AR + EK+ + + HL E
Sbjct: 221 KDWDITDKISAIKIPTLITVGEYDE---VTPNVARVIHEKI-AGSELHVFRDCSHLTMWE 276
Query: 306 RTEEVNQALID 316
E N+ L D
Sbjct: 277 DREGYNKLLSD 287
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 2e-22
Identities = 61/349 (17%), Positives = 105/349 (30%), Gaps = 93/349 (26%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
NG+ + G GPT ++ I G +W Q+ LA
Sbjct: 19 NGLNMHLAELGEGPT-ILFIHGFPELWYSWRHQMVYLAE--------------------- 56
Query: 83 GAGIEVCAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGA 138
G A D RG G ++ ++++ + DV+AL++ + ++ V H GA
Sbjct: 57 -RGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGA 115
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+IA L P++V +L L + +A E
Sbjct: 116 LIAWHLCLFRPDKVKALVNL--------SVHFSKRNPKMNVVEGLKAIYGEDHYISRFQV 167
Query: 199 HYSQEY-LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA-----CWMHKMTQK 252
E S + IL + + G + A W+ +++
Sbjct: 168 PGEIEAEFAPIGAKSVLKKILT---YRDPAPFYFPKGKGLEAIPDAPVALSSWL---SEE 221
Query: 253 DIQTIRSA----GF-----------------------LVSV----IHGRHDVIAQICYAR 281
++ + GF V V I G D+ Y
Sbjct: 222 ELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDL----VYHI 277
Query: 282 RLAEKLYPVARMID----------LPG-GHLVSHERTEEVNQALIDLIK 319
A++ L G H VS ER E+++ + D I+
Sbjct: 278 PGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQ 326
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 1e-21
Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 58/307 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I +G +VI + G W + GL
Sbjct: 68 QAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGLGEP-------------------- 107
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
A D G G S+ + Y+ ++ ++ + ++ L V G S+G + A
Sbjct: 108 -----ALAVDLPGHGHSA-WREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAI 161
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK----RAAVDLDT 198
+LAAM P+ V L L++VT + T + +A +DL
Sbjct: 162 RLAAMAPDLVGELVLVDVTPSAL---QRHAELTAEQRGTVALMHGEREFPSFQAMLDLTI 218
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
+ + + RR + + +G + T D +
Sbjct: 219 AAAPHRDVKSL----RRGVFHNSRRLD------------NGNWVWRYDAIRTFGDFAGLW 262
Query: 259 SAGFLVS----VIHG-RHDVIAQICYARRLAEKLYPVARMID-LPG-GHLVSHERTEEVN 311
+S ++ G + A R + + GH V ++ +
Sbjct: 263 DDVDALSAPITLVRGGSSGFVTDQDTAELHR--RATHFRGVHIVEKSGHSVQSDQPRALI 320
Query: 312 QALIDLI 318
+ + ++
Sbjct: 321 EIVRGVL 327
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 94.0 bits (233), Expect = 1e-21
Identities = 54/359 (15%), Positives = 95/359 (26%), Gaps = 54/359 (15%)
Query: 14 AAPDAALNDNGIKIFYRTY-----------GRGPTKVILITGLAGTHDAWGPQLKGLAGT 62
A + +++ Y Y ++ + G + W L L
Sbjct: 20 APQSTLCATDRLELTYDVYTSAERQRRSRTATRLN-LVFLHGSGMSKVVWEYYLPRLVAA 78
Query: 63 DKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTTKIMAKDVIA 119
D A +V D G S+V + T + A+DV+
Sbjct: 79 DAE---------------GNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLK 123
Query: 120 LMDHLGWKQ------AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173
+ V GHSMG A + P L L+ +
Sbjct: 124 IATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRP 183
Query: 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYS-QEYLEEYVGSSTRRAI---LYQEYVKG--IS 227
+ + D + EY++ S + Q +
Sbjct: 184 GLPPDSPQIPENLY-NSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTK 242
Query: 228 ATGMQSNYG-----FDGQIHACW---MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279
A+G + G + + M I ++ I G
Sbjct: 243 ASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQN 302
Query: 280 ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTS 337
L K + +PG HLV+ E + V + + I SP +++PQ +
Sbjct: 303 QLFLQ-KTLQNYHLDVIPGGSHLVNVEAPDLVIERINHHIH-EFVLTSPLQSSHIPQLT 359
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 2e-21
Identities = 44/301 (14%), Positives = 86/301 (28%), Gaps = 53/301 (17%)
Query: 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
++ + V+L+ GL G+ W P L LA T
Sbjct: 6 QLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCA-------------------- 45
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACK 143
D G G + + + + + G+S+G +
Sbjct: 46 --ALTLDLPGHGTNPER---HCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMH 100
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQE 203
A L+L + GG L + R + ++ A +SQ+
Sbjct: 101 GLAQGAFSRLNLRGAIIEGGH----FGLQ----ENEEKAARWQHDQQWAQ-----RFSQQ 147
Query: 204 YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263
+E + ++A ++ T + G A + + + A
Sbjct: 148 PIEHVLSDWYQQA-VFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQA 206
Query: 264 VS----VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
+ + G D ++LAE + GH V HE+ + + + +I
Sbjct: 207 LKLPIHYVCGEQDS-----KFQQLAES--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMI 259
Query: 319 K 319
Sbjct: 260 H 260
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 7e-21
Identities = 25/137 (18%), Positives = 40/137 (29%), Gaps = 30/137 (21%)
Query: 23 NGIKIFYRTY---GRGPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSV 77
NG ++F R + + L G + T W +
Sbjct: 12 NGTRVFQRKMVTDSNRRS-IALFHGYSFTSMDWDKADLFNNYSK---------------- 54
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVP--VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHS 135
G V A D G GRS+ K A+ + + G ++ + G S
Sbjct: 55 ------IGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGAS 108
Query: 136 MGAMIACKLAAMVPERV 152
MG + P+ V
Sbjct: 109 MGGGMVIMTTLQYPDIV 125
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 8e-21
Identities = 24/146 (16%), Positives = 41/146 (28%), Gaps = 28/146 (19%)
Query: 23 NGIKIFYRTYGRGPTK----VILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDS 76
G +F+R G + V+L+ G+ + + W L LA
Sbjct: 15 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQ--------------- 59
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM 136
AG A D G+G S + A++D L V S+
Sbjct: 60 -------AGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSL 112
Query: 137 GAMIACKLAAMVPERVLSLALLNVTG 162
M + ++ +
Sbjct: 113 SGMYSLPFLTAPGSQLPGFVPVAPIC 138
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 9e-21
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 23 NGIKIFYRTYG----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVE 78
G +I +GP V+L+ G + +W Q+ LAG
Sbjct: 11 RGTRIHAVADSPPDQQGPL-VVLLHGFPESWYSWRHQIPALAG----------------- 52
Query: 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
AG V A D RG GRSS + Y K + DV+ ++D G +QA V GH GA
Sbjct: 53 -----AGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGA 107
Query: 139 MIACKLAAMVPERVLSLALLNV 160
+A A + P+R + ++V
Sbjct: 108 PVAWTFAWLHPDRCAGVVGISV 129
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 1e-19
Identities = 46/250 (18%), Positives = 88/250 (35%), Gaps = 28/250 (11%)
Query: 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149
A D G G+S P Y + + A ++ G A++ G +A LAA P
Sbjct: 60 APDLIGFGQSGKP--DIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRP 117
Query: 150 ERVLSLALLNV-----TGGGFQCCPKLDLQTLSIAIR--FFRAKTPEKRAAVDLDTHYSQ 202
+ V LA + T F + Q + A R F + +TP + A+ L+ +
Sbjct: 118 DFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANA-- 175
Query: 203 EYLEEYVGSSTRRAI------LYQE-YVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255
++E + R + Y+ + S + + ++ + +Q
Sbjct: 176 -FVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFP---RELPIAGEPADVYEALQ 231
Query: 256 TIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEV 310
+ +A S G + +A R A L +I L G H + + + +
Sbjct: 232 SAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAI 290
Query: 311 NQALIDLIKA 320
+++ I
Sbjct: 291 GRSVAGWIAG 300
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 4e-19
Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 25/243 (10%)
Query: 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149
A D GMG+S P +Y + + A ++ LG ++ + H G+ + A P
Sbjct: 63 APDLIGMGKSDKP--DLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNP 120
Query: 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYV 209
ERV +A + P R +L + ++E +
Sbjct: 121 ERVKGIACME---FIR---PFPTWDEWPEFARETFQAFRTADVGRELIIDQNA-FIEGAL 173
Query: 210 GSSTRRAI------LYQE-YVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
R + Y+E ++K + + F ++ ++ +
Sbjct: 174 PKCVVRPLTEVEMDHYREPFLKPVDREPLWR---FPNELPIAGEPANIVALVEAYMNWLH 230
Query: 263 LVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDL 317
V G V+ A RLAE L P + +D+ G H + + + + +
Sbjct: 231 QSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARW 289
Query: 318 IKA 320
+ A
Sbjct: 290 LPA 292
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 9e-19
Identities = 45/312 (14%), Positives = 88/312 (28%), Gaps = 46/312 (14%)
Query: 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSV 77
+N I Y + VI + G A + W + +
Sbjct: 26 MNVLDSFINYYDSEKHAENA-VIFLHGNATSSYLWRHVVPHIE----------------- 67
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSM 136
D GMG+S Y K + A + L K+ GH
Sbjct: 68 ------PVARCIIPDLIGMGKSGKS-GNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDW 120
Query: 137 GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
GA +A A +R+ ++ + + + I +++ EK +
Sbjct: 121 GAALAFHYAYEHQDRIKAIVHME--SVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENN 178
Query: 197 DTHYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYG--FDGQIHACWMHKMTQ 251
+E + S R + + Y++ G + +I K
Sbjct: 179 FF------VETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDV 232
Query: 252 KDIQTIRSAGFLVS----VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT 307
I +A S + D A K +P + + G H + +
Sbjct: 233 VQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGA-KKFPNTEFVKVKGLHFLQEDAP 291
Query: 308 EEVNQALIDLIK 319
+E+ + + ++
Sbjct: 292 DEMGKYIKSFVE 303
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-18
Identities = 48/318 (15%), Positives = 83/318 (26%), Gaps = 64/318 (20%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G ++ Y G+G ++ G + W + L
Sbjct: 16 AGKRMAYIDEGKGDA-IVFQHGNPTSSYLWRNIMPHLE--------------------GL 54
Query: 83 GAGIEVCAFDNRGMGRSS--VPVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAM 139
G + A D GMG S P Y+ + AL D L + H G+
Sbjct: 55 GRLV---ACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSA 111
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL-QTLSIAIRFFRAKTPEKRAAVDLDT 198
+ A +RV +A + D + + FR+ E A
Sbjct: 112 LGFDWANQHRDRVQGIAFMEA---IVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIF 168
Query: 199 HYSQ---------------EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243
Y +V R + +
Sbjct: 169 VERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRS 228
Query: 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAE--KLYPVARMIDLPGGHL 301
W+ + L I+ I R+ + + +P I +PG H
Sbjct: 229 -WLEETDMP---------KL--FINAEPGAII----TGRIRDYVRSWPNQTEITVPGVHF 272
Query: 302 VSHERTEEVNQALIDLIK 319
V + EE+ A+ ++
Sbjct: 273 VQEDSPEEIGAAIAQFVR 290
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 3e-18
Identities = 44/313 (14%), Positives = 87/313 (27%), Gaps = 52/313 (16%)
Query: 23 NGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G++ Y G + + G + + A
Sbjct: 32 PGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE------------------- 72
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+G V A D G G+S PV + +YT + ++AL++ L + + G +
Sbjct: 73 ---SGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFL 129
Query: 141 ACKLAAMVPERVLSLALLNV---TGGGFQCCPKLDLQTLSIAIRFFRAKTPE-------- 189
L P R L ++N T Q + + ++
Sbjct: 130 GLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQ 189
Query: 190 --KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247
KR A L + Y + +S + + + K ++ I
Sbjct: 190 FMKRWAPTLTEAEASAYAAPFPDTSYQAGVRK--FPKMVAQRDQAXIDISTEAISF---- 243
Query: 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHER 306
+ QT + G D + + + +++ GH V
Sbjct: 244 WQNDWNGQTF--------MAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFG 295
Query: 307 TEEVNQALIDLIK 319
+ +AL +
Sbjct: 296 EQVAREALKHFAE 308
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 7e-18
Identities = 44/313 (14%), Positives = 79/313 (25%), Gaps = 54/313 (17%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G ++ Y G G ++ G + W + AG +
Sbjct: 17 KGRRMAYIDEGTGDP-ILFQHGNPTSSYLWRNIMPHCAGLGR------------------ 57
Query: 83 GAGIEVCAFDNRGMGRSSVP--VKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAM 139
+ A D GMG S Y + AL + L + + H G+
Sbjct: 58 -----LIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSA 112
Query: 140 IACKLAAMVPERVLSLALLNVTG-------------GGFQCCPKLDLQTLSIAIRFFRAK 186
+ A ERV +A + FQ + L + F +
Sbjct: 113 LGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQ 172
Query: 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246
L Y E ++ + R + A W+
Sbjct: 173 VLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAG-WL 231
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHER 306
+ L I+ + R P I + G H + +
Sbjct: 232 SESPIP---------KL--FINAEPGALTTG-RMRDFCRTW-PNQTEITVAGAHFIQEDS 278
Query: 307 TEEVNQALIDLIK 319
+E+ A+ ++
Sbjct: 279 PDEIGAAIAAFVR 291
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-12
Identities = 34/290 (11%), Positives = 90/290 (31%), Gaps = 64/290 (22%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G V+L+ G G + L G A +
Sbjct: 15 GERAVLLLHGFTGNSADVRMLGRFLES----------------------KGYTCHAPIYK 52
Query: 95 GMGRSSVPVKKTEYTTKI-MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVL 153
G G + T + + + G+++ V G S+G + + KL VP +
Sbjct: 53 GHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IE 110
Query: 154 SLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST 213
+ + C + +++ E + ++ +E++ +
Sbjct: 111 GIVTM---------CAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPM 161
Query: 214 RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273
+ + +Q + + + I + V+ RHD
Sbjct: 162 K------------TLKALQE------------LIADVRDHLDLIYAP-TF--VVQARHDE 194
Query: 274 IAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERT-EEVNQALIDLIKA 320
+ A + ++ PV ++ GH+++ ++ +++++ + +++
Sbjct: 195 MINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 244
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 61.6 bits (149), Expect = 6e-12
Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 34/128 (26%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
L+ G+ + + G+GP V+L+ A W L
Sbjct: 7 LHLYGLNLVFDRVGKGPP-VLLV---AEEASRWPEALP---------------------- 40
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
G D G GR+ P + +A V + V +G
Sbjct: 41 ----EGYAFYLLDLPGYGRTEGP----RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLA 92
Query: 140 IACKLAAM 147
+ L A+
Sbjct: 93 LGPHLEAL 100
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 8e-11
Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 23/248 (9%)
Query: 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147
V FD RG GRS TT + D+ L + G +Q VFG S G+ +A A
Sbjct: 66 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 125
Query: 148 VPERVLSLALLNVTGGG------FQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
PERV + L + + E++ +
Sbjct: 126 HPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRL 185
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ------------IHACWMHKM 249
+ + + +++ + + +++G D H ++
Sbjct: 186 TSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESD 245
Query: 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308
Q ++HGR+D+ Q+ A LA+ P A + + G GH
Sbjct: 246 DQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSYDE---P 301
Query: 309 EVNQALID 316
+ L+
Sbjct: 302 GILHQLMI 309
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 1e-10
Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 31/258 (12%)
Query: 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147
+ FD RG GRS+ + TT + D+ L HLG + VFG S G+ +A A
Sbjct: 63 IVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQT 122
Query: 148 VPERVLSLALLNVTGGGFQ-----CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
P++V L L + + A P +RA DL + + +
Sbjct: 123 HPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERA--DLMSAFHR 180
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ----------------IHACWM 246
+ + A + + S + ++ + ++ +
Sbjct: 181 RLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFF 240
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
Q R A ++HGR+DV+ + A L + P A++ P GH
Sbjct: 241 EVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAFEP 299
Query: 306 RTEEVNQALIDLIKASEK 323
+ L++A++
Sbjct: 300 ENVDA------LVRATDG 311
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 4e-10
Identities = 43/309 (13%), Positives = 87/309 (28%), Gaps = 79/309 (25%)
Query: 20 LNDNGIKIFYR-TYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDS 76
L +G+++ G I+ G + L+ +A + L+D
Sbjct: 27 LERDGLQLVGTREEPFGEIYDMAIIFHGFTANRN--TSLLREIANS----------LRD- 73
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVF 132
I FD G G S K T +D A+++++ + ++
Sbjct: 74 -------ENIASVRFDFNGHGDSDG--KFENMTVLNEIEDANAILNYVKTDPHVRNIYLV 124
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192
GH+ G ++A LA + P+ + + LL P L+ ++
Sbjct: 125 GHAQGGVVASMLAGLYPDLIKKVVLL---------APAATLKGDALEGNTQGVTYNPDHI 175
Query: 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252
L D + ++ Q
Sbjct: 176 PDRLP--------------------------------------FKDLTLGGFYLRIAQQL 197
Query: 253 DI-QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGG-HLVSHERTEEV 310
I + V +IHG D + +++ + + + G H S +
Sbjct: 198 PIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNS-TLHLIEGADHCFSDSYQKNA 256
Query: 311 NQALIDLIK 319
D ++
Sbjct: 257 VNLTTDFLQ 265
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 58.5 bits (141), Expect = 6e-10
Identities = 33/317 (10%), Positives = 82/317 (25%), Gaps = 85/317 (26%)
Query: 21 NDNGIKI-FYRTYGRGPTK-----VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQ 74
+NG ++ + T + +++ +G A D + + L+
Sbjct: 14 VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST------------- 60
Query: 75 DSVESGDGGAGIEVCAFDNRG-MGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAH 130
G V +D+ +G SS + E+T + + L G +
Sbjct: 61 ---------NGFHVFRYDSLHHVGLSSGSI--DEFTMTTGKNSLCTVYHWLQTKGTQNIG 109
Query: 131 VFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190
+ S+ A +A ++ + + L A+
Sbjct: 110 LIAASLSARVAYEVISDLELSFLITAV--------------------------------- 136
Query: 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250
V+L + +Y + + + ++ +
Sbjct: 137 -GVVNLRDTLEKALGFDY----------LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHH 185
Query: 251 QKDIQTIRSAGFLVS----VIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSH 304
+ + S +D + + + ++ L G H +
Sbjct: 186 WDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG- 244
Query: 305 ERTEEVNQALIDLIKAS 321
E + + KA+
Sbjct: 245 ENLVVLRNFYQSVTKAA 261
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 2e-09
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
G V + G P + + V ++ G + ++ GHS G + +
Sbjct: 40 RGATVYVANLSGFQSDDGP----NGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRY 95
Query: 144 LAAMVPERVLSLALLNVTGGG 164
+AA+ P+ V S+ + G
Sbjct: 96 VAAVAPDLVASVTTIGTPHRG 116
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 4e-09
Identities = 37/288 (12%), Positives = 73/288 (25%), Gaps = 71/288 (24%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
T V+L+ G+ + + L +G V
Sbjct: 21 TDTGVVLLHAYTGSPNDMNFMARALQR----------------------SGYGVYVPLFS 58
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERV 152
G G T+ I + A + H+ + + VFG S+G + A K +P
Sbjct: 59 GHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGIT 118
Query: 153 LSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS 212
+ P L + + A+ + A ++ YL +
Sbjct: 119 AGGVFSS---------PILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQL--- 166
Query: 213 TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272
AI D+ ++ + D
Sbjct: 167 --AAID--------------------------QFATTVAADLNLVKQP---TFIGQAGQD 195
Query: 273 VIAQICYARRLAEKLYPVA--RMIDLPG-GHLVSHER-TEEVNQALID 316
+ A +L + L A H+++ + + +I
Sbjct: 196 ELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIA 243
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 64/246 (26%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTT-KIMAKDVIALMDHL----GWKQAHVFGHSMGA 138
G+ D G G+S K E T +++A++D+ ++ GHS G
Sbjct: 55 IGVATLRADMYGHGKSD---GKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGG 111
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+ AAM + + +L L P + ++ K + +LD
Sbjct: 112 LSVMLAAAMERDIIKALIPL---------SPAAMIPEIARTGELLGLKFDPENIPDELDA 162
Query: 199 H----YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
Y+ + I +++V +
Sbjct: 163 WDGRKLKGNYVRV------AQTIRVEDFVDKYTKP------------------------- 191
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGG-HLVSHERTEEVNQA 313
V ++HG D + +++ Y +++ +PG H H E V +A
Sbjct: 192 ---------VLIVHGDQDEAVPYEASVAFSKQ-YKNCKLVTIPGDTHCYDHHL-ELVTEA 240
Query: 314 LIDLIK 319
+ + +
Sbjct: 241 VKEFML 246
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 5e-08
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKI--MAKDVIALMDHLGWKQAH------VFGHS 135
+ V A D+ G G+S + + +DV+ +D + ++ + + GHS
Sbjct: 68 LDLLVFAHDHVGHGQSE---GERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHS 122
Query: 136 MGAMIACKLAAMVPERV 152
MG IA AA P
Sbjct: 123 MGGAIAILTAAERPGHF 139
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 9e-08
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKI--MAKDVIALMDHLGWKQAH------VFGHS 135
+ V A D+ G G+S + + +DV+ +D + ++ + + GHS
Sbjct: 86 LDLLVFAHDHVGHGQSE---GERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHS 140
Query: 136 MGAMIACKLAAMVPERV 152
MG IA AA P
Sbjct: 141 MGGAIAILTAAERPGHF 157
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 50.0 bits (118), Expect = 4e-07
Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 15/135 (11%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G +LI + + D ++I+ G V D R
Sbjct: 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLAR-----NGFNVYTIDYR 102
Query: 95 GMGRS-----SVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLA 145
+ D+ ++ + G ++ ++ G S G + A +
Sbjct: 103 THYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYS 162
Query: 146 AM-VPERVLSLALLN 159
++ + L LL+
Sbjct: 163 SLYWKNDIKGLILLD 177
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 49.3 bits (117), Expect = 6e-07
Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 39/238 (16%)
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
G+ FD G G S + + + ++ +A++DH ++A + G SMG IA +L
Sbjct: 66 GVGAIRFDYSGHGASGGAFRDGTISRWL--EEALAVLDHFKPEKAILVGSSMGGWIALRL 123
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
+ R + ++ + RA+ E ++ + +
Sbjct: 124 IQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPN 183
Query: 205 LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264
+ DG+ + + + + G V
Sbjct: 184 IFTR-------------------------ALMEDGRAN---------RVMAGMIDTGCPV 209
Query: 265 SVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPGG-HLVS-HERTEEVNQALIDLIK 319
++ G D +A +L E L + + G H +S + + + A+ +I+
Sbjct: 210 HILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIE 267
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 41/298 (13%), Positives = 84/298 (28%), Gaps = 69/298 (23%)
Query: 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
G + FY GP V+L+ G GT + P + A
Sbjct: 30 GAEPFY--AENGPVGVLLVHGFTGTPHSMRPLAEAYAK---------------------- 65
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIA 141
AG VC +G G +++T + V L + V G SMG +
Sbjct: 66 AGYTVCLPRLKGHGTHYEDMERTTFHD--WVASVEEGYGWLKQRCQTIFVTGLSMGGTLT 123
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
LA P+ + + +D+ ++ + + +
Sbjct: 124 LYLAEHHPDICGIVPI----------NAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPD 173
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
+ L Y K +A+ +Q + T+ + I
Sbjct: 174 VKEL---------------AYEKTPTASLLQLA----------RLMAQTKAKLDRIVCP- 207
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHER-TEEVNQALID 316
+ D + A + + + ++ L H+ + + + + ++
Sbjct: 208 --ALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLE 263
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 21/124 (16%), Positives = 33/124 (26%), Gaps = 30/124 (24%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+ + G G+ + + G G FD RG
Sbjct: 31 VLFVHGWGGSQHHSLVRAREAVG----------------------LGCICMTFDLRGHEG 68
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHL---GW---KQAHVFGHSMGAMIACKLAAMVPERV 152
+ + D+ A D L + V G S G ++ L P
Sbjct: 69 YASMRQSVTRAQ--NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEW 126
Query: 153 LSLA 156
L+L
Sbjct: 127 LALR 130
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 6e-05
Identities = 34/238 (14%), Positives = 74/238 (31%), Gaps = 16/238 (6%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIAC 142
AG +V A D G +++ T ++ LM+ L ++ + GHS+G M
Sbjct: 30 AGHKVTALDLAASGTDLRKIEEL-RTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLG 88
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
P+++ + L P + + ++ E + S
Sbjct: 89 LAMEKYPQKIYAAVFLA------AFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSP 142
Query: 203 E--YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
E + G LYQ A + + +M +++ T
Sbjct: 143 EEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLV-----RPSSLFMEDLSKAKYFTDERF 197
Query: 261 GFL-VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDL 317
G + I D + R + + + H+ +++ +L+++
Sbjct: 198 GSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEI 255
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 7e-05
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVF-GHSMGAMIAC 142
G D + + + ++ + K V G S+G+ IA
Sbjct: 32 LGWTHERPDFTDLDARRDL--GQLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAA 89
Query: 143 KLAAMVPERVLSL 155
+++ VP R L L
Sbjct: 90 QVSLQVPTRALFL 102
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 Length = 377 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 46/163 (28%)
Query: 23 NGIKIFYRTYGR-GPTK--VILI-TGLAGTHDAWGPQLK-----GLAGTDKPNDDDE--- 70
+ I + Y+TYG K +LI L G + + + G D D
Sbjct: 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFF 101
Query: 71 ---TILQDSVESGDGGAGIEVCAFDNRGMG----RSSVPVKKTEY-------TTKIMAKD 116
+L GG C G S P Y + + K
Sbjct: 102 ISSNVL--------GG-----C------KGTTGPSSINPQTGKPYGSQFPNIVVQDIVKV 142
Query: 117 VIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALL 158
AL++HLG + G S G M A + A P+ + ++ L
Sbjct: 143 QKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNL 185
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} Length = 377 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 36/161 (22%)
Query: 25 IKIFYRTYGR-GPTK--VILI-TGLAGTHDAWGPQLK---------GLAGTDKPNDDDE- 70
+++ Y TYG + VILI + T A G GL G K D ++
Sbjct: 27 VQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQY 86
Query: 71 -TILQDSVESGDGGAGIEVCAFDNRGM---GRSSV-PVKKTEY-------TTKIMAKDVI 118
I D++ N + G S+ P EY T +A+
Sbjct: 87 FVICTDNL----CN-----VQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQC 137
Query: 119 ALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALL 158
L+ +G + H V G S G MIA + A P V + +
Sbjct: 138 ELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGV 178
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 4e-04
Identities = 15/122 (12%), Positives = 33/122 (27%), Gaps = 27/122 (22%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+++ G+ G + L G
Sbjct: 6 VVMVHGIGGASFNFAGIKSYLVS----------------------QGWSRDKLYAVDFWD 43
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLA 156
+ ++++ V ++D G K+ + HSMG + +V ++
Sbjct: 44 KTGTN---YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 100
Query: 157 LL 158
L
Sbjct: 101 TL 102
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 4e-04
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIAC 142
AG +V A D G + + +T + ++ ++ +M + ++ + GHS G M
Sbjct: 36 AGHKVTAVDLSAAGINPRRLD-EIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLG 94
Query: 143 KLAAMVPERVLSLALLN 159
PE++ ++
Sbjct: 95 LAMETYPEKISVAVFMS 111
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 351 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.98 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.98 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.98 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.97 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.97 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.97 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.97 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.96 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.96 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.95 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.95 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.94 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.94 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.94 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.94 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.94 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.94 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.94 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.94 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.93 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.93 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.93 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.93 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.93 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.93 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.93 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.93 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.92 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.92 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.92 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.92 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.92 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.92 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.92 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.92 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.92 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.92 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.91 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.91 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.91 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.9 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.9 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.9 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.9 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.9 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.9 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.9 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.89 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.89 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.89 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.89 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.89 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.88 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.88 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.88 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.88 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.88 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.88 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.88 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.87 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.87 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.87 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.87 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.87 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.87 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.86 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.86 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.86 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.86 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.85 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.85 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.85 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.85 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.85 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.85 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.84 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.84 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.84 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.84 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.84 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.84 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.84 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.83 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.83 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.83 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.83 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.83 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.82 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.82 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.81 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.81 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.8 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.8 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.79 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.79 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.79 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.78 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.77 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.77 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.76 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.76 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.76 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.76 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.76 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.76 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.75 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.75 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.75 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.75 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.74 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.73 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.73 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.72 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.72 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.72 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.72 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.7 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.68 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.68 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.68 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.68 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.66 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.66 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.64 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.63 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.63 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.62 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.62 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.61 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.6 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.59 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.58 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.53 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.53 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.53 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.5 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.5 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.45 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.44 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.35 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.24 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.23 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 99.02 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.77 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.76 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.72 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.7 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.64 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.59 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.57 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.55 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.52 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.48 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.38 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.38 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.36 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.21 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.14 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.14 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.09 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.08 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.9 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.87 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.76 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.68 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.68 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.66 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.63 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.62 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.57 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.46 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.41 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.36 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.29 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.69 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.57 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.56 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.0 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.96 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 95.95 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 95.93 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.83 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.48 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.44 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 95.02 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.9 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.65 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 93.87 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 93.42 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 93.37 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 91.57 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 89.19 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=270.83 Aligned_cols=254 Identities=23% Similarity=0.336 Sum_probs=179.0
Q ss_pred ccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..+.+.+|.+++|...|+ +.|+|||+||++++...|.++++.|++ +|+|+++|+||
T Consensus 7 ~~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~D~rG 63 (266)
T 3om8_A 7 SFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTR-----------------------HFRVLRYDARG 63 (266)
T ss_dssp EEEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGGGGHHHHHT-----------------------TCEEEEECCTT
T ss_pred eEEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHHHHHHHHHhhc-----------------------CcEEEEEcCCC
Confidence 346778999999999997 467899999999999999999999997 89999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
||.|+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..... . ...
T Consensus 64 ~G~S~~~~--~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~----~--~~~ 135 (266)
T 3om8_A 64 HGASSVPP--GPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLG----P--AAQ 135 (266)
T ss_dssp STTSCCCC--SCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCC----C--SHH
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCC----c--hhH
Confidence 99998765 368999999999999999999999999999999999999999999999999999763210 0 000
Q ss_pred hHH-HHhhcc-cCCHHHHhhcCccccccHHHHHHhhcCCc--hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 176 LSI-AIRFFR-AKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 176 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
+.. ...... ...... ....+..++.... ......+.+...+.... ...+....... ...
T Consensus 136 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~ 198 (266)
T 3om8_A 136 WDERIAAVLQAEDMSET----------AAGFLGNWFPPALLERAEPVVERFRAMLMATN---RHGLAGSFAAV----RDT 198 (266)
T ss_dssp HHHHHHHHHHCSSSHHH----------HHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSC---HHHHHHHHHHH----HTC
T ss_pred HHHHHHHHHccccHHHH----------HHHHHHHhcChhhhhcChHHHHHHHHHHHhCC---HHHHHHHHHHh----hcc
Confidence 100 000000 000000 0001111100000 00001111111111000 00000000000 011
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHH
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~ 319 (351)
+..+.+.++++|+|+|+|++|.++|++.++.+.+.+ |+++++++++||++++|+|++|++.|.+||+
T Consensus 199 d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~i-p~a~~~~i~~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 199 DLRAQLARIERPTLVIAGAYDTVTAASHGELIAASI-AGARLVTLPAVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp BCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEESCCSCHHHHCHHHHHHHHHHHHT
T ss_pred chhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHhc
Confidence 222457889999999999999999999999999986 9999999988999999999999999999995
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=260.42 Aligned_cols=263 Identities=21% Similarity=0.280 Sum_probs=176.8
Q ss_pred cccccC--C---eEEEEEEcCCCCCeEEEEecCC---CCccchHHHH-HHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 18 AALNDN--G---IKIFYRTYGRGPTKVILITGLA---GTHDAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 18 ~~~~~~--g---~~l~y~~~g~~~p~vv~~HG~~---~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
.+++++ | .+++|...|++ |+|||+||++ ++...|..++ +.|.+ +|+|
T Consensus 11 ~~~~~~~~g~~~~~l~y~~~G~g-~~vvllHG~~~~~~~~~~w~~~~~~~L~~-----------------------~~~v 66 (286)
T 2puj_A 11 KFVKINEKGFSDFNIHYNEAGNG-ETVIMLHGGGPGAGGWSNYYRNVGPFVDA-----------------------GYRV 66 (286)
T ss_dssp EEEEECSTTCSSEEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHHHT-----------------------TCEE
T ss_pred eEEEecCCCcceEEEEEEecCCC-CcEEEECCCCCCCCcHHHHHHHHHHHHhc-----------------------cCEE
Confidence 467777 8 99999999976 4699999997 7777899999 99987 7999
Q ss_pred EEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 018750 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (351)
+++|+||||.|+.+.. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 67 i~~D~~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~ 145 (286)
T 2puj_A 67 ILKDSPGFNKSDAVVM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF 145 (286)
T ss_dssp EEECCTTSTTSCCCCC-SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS
T ss_pred EEECCCCCCCCCCCCC-cCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcc
Confidence 9999999999987653 368999999999999999999999999999999999999999999999999999875322111
Q ss_pred CccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
...................... ....+........ ................ . .............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~ 211 (286)
T 2puj_A 146 APMPMEGIKLLFKLYAEPSYET----------LKQMLQVFLYDQSLITEELLQGRWEAIQRQ-P---EHLKNFLISAQKA 211 (286)
T ss_dssp SCSSCHHHHHHHHHHHSCCHHH----------HHHHHHHHCSCGGGCCHHHHHHHHHHHHHC-H---HHHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHhhCCcHHH----------HHHHHHHHhcCCccCCHHHHHHHHHHhhcC-H---HHHHHHHHHHhhh
Confidence 1001111111111111000000 0001111110000 0000000000000000 0 0000000000000
Q ss_pred c-CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 248 K-MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 248 ~-~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
. ...+....++++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 212 ~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 212 PLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp CGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred hccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 0 000122457889999999999999999999999999876 8999999998 9999999999999999999974
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-37 Score=261.90 Aligned_cols=261 Identities=22% Similarity=0.311 Sum_probs=171.8
Q ss_pred cccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
++++.+|.+++|...|+++ +|||+||++++...|..+++.|.+ +||+|+++|+||||
T Consensus 2 ~~~~~~g~~l~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G 58 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGSGK-PVLFSHGWLLDADMWEYQMEYLSS----------------------RGYRTIAFDRRGFG 58 (271)
T ss_dssp EEECTTSCEEEEEEESSSS-EEEEECCTTCCGGGGHHHHHHHHT----------------------TTCEEEEECCTTST
T ss_pred eEEcCCCCEEEEEccCCCC-eEEEECCCCCcHHHHHHHHHHHHh----------------------CCceEEEecCCCCc
Confidence 4677899999999999876 599999999999999999999987 69999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCccc----
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKLD---- 172 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~---- 172 (351)
.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.++..+ |++|+++|++++..+.....+...
T Consensus 59 ~S~~~~--~~~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (271)
T 3ia2_A 59 RSDQPW--TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP 136 (271)
T ss_dssp TSCCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBC
T ss_pred cCCCCC--CCCCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCccccc
Confidence 998765 3678999999999999999999999999999999777766554 899999999997643221111100
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcC---CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS---STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
............. ... .+...+...+... .................... .......... .
T Consensus 137 ~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~ 199 (271)
T 3ia2_A 137 LDVFARFKTELLK----DRA------QFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASL---KATVDCVTAF----A 199 (271)
T ss_dssp HHHHHHHHHHHHH----HHH------HHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCH---HHHHHHHHHH----H
T ss_pred HHHHHHHHHHHHh----hHH------HHHHHhhHhhhccccccccCHHHHHHHHhhhhhccH---HHHHHHHHHh----h
Confidence 0000000000000 000 0000000000000 00000000000000000000 0000000000 0
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+....+.++++|+|+|+|++|.++|++...++...+.++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 200 ~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 200 ETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred ccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 0122356788999999999999999998875555444558999999998 9999999999999999999963
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=259.24 Aligned_cols=254 Identities=24% Similarity=0.333 Sum_probs=175.9
Q ss_pred ccccCCeEEEEEEcCC-C--CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 19 ALNDNGIKIFYRTYGR-G--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~--~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+++.+|.+++|...|+ + .|+|||+||++++...|.++++.|.+ +|+|+++|+||
T Consensus 6 ~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G 62 (266)
T 2xua_A 6 YAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSK-----------------------HFRVLRYDTRG 62 (266)
T ss_dssp EEECSSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHT-----------------------TSEEEEECCTT
T ss_pred eEEECCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhc-----------------------CeEEEEecCCC
Confidence 5667899999999986 3 57899999999999999999999987 79999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
||.|+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..... ....
T Consensus 63 ~G~S~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~------~~~~ 134 (266)
T 2xua_A 63 HGHSEAPK--GPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIG------SPEV 134 (266)
T ss_dssp STTSCCCS--SCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCS------CHHH
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCC------chHH
Confidence 99998765 368999999999999999999999999999999999999999999999999999864210 0000
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc--hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
+.............. ........++.... ......+.+...+.... ...+......... .+.
T Consensus 135 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~ 198 (266)
T 2xua_A 135 WVPRAVKARTEGMHA---------LADAVLPRWFTADYMEREPVVLAMIRDVFVHTD---KEGYASNCEAIDA----ADL 198 (266)
T ss_dssp HHHHHHHHHHHCHHH---------HHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSC---HHHHHHHHHHHHH----CCC
T ss_pred HHHHHHHHHhcChHH---------HHHHHHHHHcCcccccCCHHHHHHHHHHHhhCC---HHHHHHHHHHHhc----cCc
Confidence 100000000000000 00000000000000 00001111111111000 0000000000000 011
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.+.+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++||+++.|+|+++++.|.+||++
T Consensus 199 ~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 199 RPEAPGIKVPALVISGTHDLAATPAQGRELAQAI-AGARYVELDASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEESCCSSHHHHTHHHHHHHHHHHHTC
T ss_pred hhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhC-CCCEEEEecCCCCchhcCHHHHHHHHHHHHHh
Confidence 2456789999999999999999999999999876 88999999999999999999999999999974
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=264.74 Aligned_cols=267 Identities=16% Similarity=0.141 Sum_probs=176.4
Q ss_pred CccccccCC----eEEEEEEcCC-C-CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 16 PDAALNDNG----IKIFYRTYGR-G-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 16 ~~~~~~~~g----~~l~y~~~g~-~-~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
...+++++| .+++|.+.|+ + .|+|||+||++++...|.++++.|++ +||+||
T Consensus 21 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~rvi 78 (310)
T 1b6g_A 21 SPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE----------------------SGARVI 78 (310)
T ss_dssp CCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHH----------------------TTCEEE
T ss_pred CceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHHHHHHh----------------------CCCeEE
Confidence 456778888 9999999984 2 46799999999999999999999987 479999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC-
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC- 168 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~- 168 (351)
++|+||||.|+.+.....|+++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 79 a~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~ 158 (310)
T 1b6g_A 79 APDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQ 158 (310)
T ss_dssp EECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTC
T ss_pred EeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccc
Confidence 9999999999876532468999999999999999999999999999999999999999999999999999853100000
Q ss_pred C------ccchhhhHHHHhhcc--c-CCHHHHhhcCccccccHHHHHHhhcCCchh--hhhHHHHHhhhhhccCCCCCCc
Q 018750 169 P------KLDLQTLSIAIRFFR--A-KTPEKRAAVDLDTHYSQEYLEEYVGSSTRR--AILYQEYVKGISATGMQSNYGF 237 (351)
Q Consensus 169 ~------~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 237 (351)
+ ............... . ........... ..........+....... ......+...+ .. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~---- 229 (310)
T 1b6g_A 159 PAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWA-PTLTEAEASAYAAPFPDTSYQAGVRKFPKMV-AQ---R---- 229 (310)
T ss_dssp THHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHS-TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHH-HS---C----
T ss_pred cchhhhhhccchHHHHHHHHhccCchhhhhhHHhhcC-CCCCHHHHHHHhcccCCccchHHHHHHHHHh-cc---c----
Confidence 0 000000000000000 0 00000000000 001111111111000000 00000000000 00 0
Q ss_pred chhhhhhhcccCCHHHHHHhh-ccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEc--CC-CccccccChHHHHHH
Q 018750 238 DGQIHACWMHKMTQKDIQTIR-SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL--PG-GHLVSHERTEEVNQA 313 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~-~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~--~g-gH~~~~~~p~~~~~~ 313 (351)
.. ..+ ....+..+.+. ++++|+|+|+|++|.+++ +..+.+.+.+ ++++++++ ++ ||++++ +|++|++.
T Consensus 230 ~~---~~~--~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~i-p~~~~~~i~~~~~GH~~~~-~p~~~~~~ 301 (310)
T 1b6g_A 230 DQ---AXI--DISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKAL-INGCPEPLEIADAGHFVQE-FGEQVARE 301 (310)
T ss_dssp CH---HHH--HHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSCGGG-GHHHHHHH
T ss_pred cc---chh--hhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhc-ccccceeeecCCcccchhh-ChHHHHHH
Confidence 00 000 00012345677 899999999999999999 8888898877 88888877 87 999999 99999999
Q ss_pred HHHHHHhc
Q 018750 314 LIDLIKAS 321 (351)
Q Consensus 314 i~~fl~~~ 321 (351)
|.+||++.
T Consensus 302 i~~Fl~~~ 309 (310)
T 1b6g_A 302 ALKHFAET 309 (310)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 99999864
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=262.98 Aligned_cols=257 Identities=20% Similarity=0.291 Sum_probs=170.8
Q ss_pred cccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC
Q 018750 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 99 (351)
.+.+|.+++|...|+++ +|||+||++++...|..+++.|.+ +||+|+++|+||||.|
T Consensus 12 ~~~~g~~l~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G~S 68 (281)
T 3fob_A 12 ENQAPIEIYYEDHGTGK-PVVLIHGWPLSGRSWEYQVPALVE----------------------AGYRVITYDRRGFGKS 68 (281)
T ss_dssp ETTEEEEEEEEEESSSE-EEEEECCTTCCGGGGTTTHHHHHH----------------------TTEEEEEECCTTSTTS
T ss_pred CCCCceEEEEEECCCCC-eEEEECCCCCcHHHHHHHHHHHHh----------------------CCCEEEEeCCCCCCCC
Confidence 45679999999999875 599999999999999999999976 5899999999999999
Q ss_pred CCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCccc----h-
Q 018750 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKLD----L- 173 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~----~- 173 (351)
+.+. ..++++++++|+.++++.++.++++|+||||||.+++.++..+ |++|+++|++++..+......... .
T Consensus 69 ~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 146 (281)
T 3fob_A 69 SQPW--EGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDD 146 (281)
T ss_dssp CCCS--SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCH
T ss_pred CCCc--cccCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccch
Confidence 8765 4689999999999999999999999999999999888876664 899999999997643221111000 0
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC----chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS----TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
............ .. ..+...+...++... ................. ............ .
T Consensus 147 ~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~ 209 (281)
T 3fob_A 147 ATIETFKSGVIN---DR-------LAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGA---SPKGTLDCITAF----S 209 (281)
T ss_dssp HHHHHHHHHHHH---HH-------HHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTS---CHHHHHHHHHHH----H
T ss_pred hHHHHHHHHhhh---hH-------HHHHHHHHHHhcccccccccchHHHHHHhhhhhccc---ChHHHHHHHHHc----c
Confidence 000000000000 00 000001111111110 00000000000000000 000000000000 0
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
..+..+.++++++|+|+|+|++|.++|++.. +.+.+. .++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 210 ~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~-~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 210 KTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEA-IPNSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp HCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHH-STTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred ccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHh-CCCceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 1123456789999999999999999998866 555565 49999999998 999999999999999999996
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-36 Score=257.34 Aligned_cols=256 Identities=22% Similarity=0.361 Sum_probs=175.7
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCcc---chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
..+++.+|.+++|...|+++ +|||+||++.+.. .|..+++.|.+ +|+|+++|+
T Consensus 7 ~~~~~~~g~~l~y~~~G~g~-~vvllHG~~~~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl 62 (282)
T 1iup_A 7 GKSILAAGVLTNYHDVGEGQ-PVILIHGSGPGVSAYANWRLTIPALSK-----------------------FYRVIAPDM 62 (282)
T ss_dssp CEEEEETTEEEEEEEECCSS-EEEEECCCCTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECC
T ss_pred cceEEECCEEEEEEecCCCC-eEEEECCCCCCccHHHHHHHHHHhhcc-----------------------CCEEEEECC
Confidence 45788899999999999765 6999999976554 78888888875 999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
||||.|+.+.. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... .
T Consensus 63 ~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~-----~ 136 (282)
T 1iup_A 63 VGFGFTDRPEN-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV-----T 136 (282)
T ss_dssp TTSTTSCCCTT-CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCC-----C
T ss_pred CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCC-----C
Confidence 99999987653 36799999999999999999999999999999999999999999999999999986432110 1
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhh-------hh
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHA-------CW 245 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 245 (351)
......... ....... ...+........ ................ .....+.. .+
T Consensus 137 ~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 198 (282)
T 1iup_A 137 EGLNAVWGY--TPSIENM----------RNLLDIFAYDRSLVTDELARLRYEASIQP------GFQESFSSMFPEPRQRW 198 (282)
T ss_dssp HHHHHHHTC--CSCHHHH----------HHHHHHHCSSGGGCCHHHHHHHHHHHTST------THHHHHHHHSCSSTHHH
T ss_pred HHHHHHhcC--CCcHHHH----------HHHHHHhhcCcccCCHHHHHHHHhhccCh------HHHHHHHHHHhcccccc
Confidence 111111110 0000000 001111100000 0000000000000000 00000000 00
Q ss_pred cccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
...... ..+.+.++++|+|+|+|++|.++|++.++++.+.+ ++++++++++ ||+++.|+|+++++.|.+||++..
T Consensus 199 ~~~~~~-~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 274 (282)
T 1iup_A 199 IDALAS-SDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEAN 274 (282)
T ss_dssp HHHHCC-CHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC-
T ss_pred cccccc-chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEECCCCCCccccCHHHHHHHHHHHHhcCC
Confidence 000000 01567889999999999999999999999999876 8999999998 999999999999999999998643
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=259.55 Aligned_cols=264 Identities=14% Similarity=0.115 Sum_probs=173.7
Q ss_pred CccccccCC----eEEEEEEcCC-C-CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 16 PDAALNDNG----IKIFYRTYGR-G-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 16 ~~~~~~~~g----~~l~y~~~g~-~-~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
...+++++| .+++|...|+ . .|+|||+||++++...|..+++.|.+ +||+|+
T Consensus 20 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~rvi 77 (297)
T 2xt0_A 20 APHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTA----------------------AGGRVV 77 (297)
T ss_dssp CCEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTHHHHHH----------------------TTCEEE
T ss_pred ccEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCcceeHHHHHHHHHh----------------------CCcEEE
Confidence 456778888 9999999984 2 46799999999999999999999987 579999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
++|+||||.|+.+.....|+++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.. ... .
T Consensus 78 a~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~-~~~--~ 154 (297)
T 2xt0_A 78 APDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL-AVG--L 154 (297)
T ss_dssp EECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC-CSS--S
T ss_pred EeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC-Ccc--c
Confidence 9999999999876532478999999999999999999999999999999999999999999999999999853 111 0
Q ss_pred ccchhhhHHHHhhcc---cCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 170 KLDLQTLSIAIRFFR---AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
.............. ............ ..........+........ ... ....+........... ..
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~--~~----- 223 (297)
T 2xt0_A 155 -SPGKGFESWRDFVANSPDLDVGKLMQRAI-PGITDAEVAAYDAPFPGPE-FKA-GVRRFPAIVPITPDME--GA----- 223 (297)
T ss_dssp -CSCHHHHHHHHHHHTCTTCCHHHHHHHHS-TTCCHHHHHHHHTTCSSGG-GCH-HHHHGGGGSCCSTTST--TH-----
T ss_pred -CCchhHHHHHHHhhcccccchhHHHhccC-ccCCHHHHHHHhccccCcc-hhH-HHHHHHHhCccccccc--hh-----
Confidence 00000100110000 000000000000 0011111111110000000 000 0000000000000000 00
Q ss_pred ccCCHHHHHHhh-ccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEE--cCC-CccccccChHHHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIR-SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMID--LPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 247 ~~~~~~~~~~l~-~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~--~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
....+..+.+. ++++|+|+|+|++|.+++ +..+.+.+.+ +++++.+ +++ ||++++ +|++|++.|.+||+
T Consensus 224 -~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~-p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 224 -EIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQA-IRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp -HHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred -hHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhC-CCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 00122345677 899999999999999999 8888888877 7776654 676 999999 99999999999985
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=258.56 Aligned_cols=273 Identities=16% Similarity=0.197 Sum_probs=179.0
Q ss_pred ccccccCCeEEEEEEcCCCC-CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~-p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..+++.+|.+++|...|+++ |+|||+||++++...|..+++.|.+ +|+||++|+||
T Consensus 9 ~~~~~~~g~~l~y~~~G~g~~~pvvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G 65 (316)
T 3afi_E 9 IRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSP-----------------------VAHCIAPDLIG 65 (316)
T ss_dssp -CEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGTTTHHHHTT-----------------------TSEEEEECCTT
T ss_pred ceeEEeCCEEEEEEEeCCCCCCeEEEECCCCCchHHHHHHHHHHhh-----------------------CCEEEEECCCC
Confidence 34577899999999999764 2699999999999999999999987 79999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC--CCCCCc--c
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG--FQCCPK--L 171 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~--~~~~~~--~ 171 (351)
||.|+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..+. ....+. .
T Consensus 66 ~G~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 143 (316)
T 3afi_E 66 FGQSGKPD--IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEV 143 (316)
T ss_dssp STTSCCCS--SCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCC
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhh
Confidence 99998754 46899999999999999999999999999999999999999999999999999974321 100000 0
Q ss_pred -ch----hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc---CCchhhhhHHHHHhhhhhccCCCCCCcchhhhh
Q 018750 172 -DL----QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (351)
Q Consensus 172 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (351)
.. .........+............. ..+...... .........+.+...+... ............
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 216 (316)
T 3afi_E 144 AEEQDHAEAARAVFRKFRTPGEGEAMILEA-----NAFVERVLPGGIVRKLGDEEMAPYRTPFPTP--ESRRPVLAFPRE 216 (316)
T ss_dssp GGGHHHHHHHHHHHHHHTSTTHHHHHHTTS-----CHHHHTTTGGGCSSCCCHHHHHHHHTTCCST--GGGHHHHHTGGG
T ss_pred ccccccchhHHHHHHHhcCCchhhHHHhcc-----chHHHHhcccccCCCCCHHHHHHHHhhcCCc--cchhHHHHHHHh
Confidence 00 00011111111110000000000 000000000 0000000111111110000 000000000000
Q ss_pred hhcc-------cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHH
Q 018750 244 CWMH-------KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 244 ~~~~-------~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
.... ....+....++++++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~GH~~~~e~p~~~~~~i~ 295 (316)
T 3afi_E 217 LPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAIGRSVA 295 (316)
T ss_dssp SCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-SSEEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhC-CCCeEEEcCCCCCCchhhCHHHHHHHHH
Confidence 0000 0001223556789999999999999999999999999876 9999999998 99999999999999999
Q ss_pred HHHHhcC
Q 018750 316 DLIKASE 322 (351)
Q Consensus 316 ~fl~~~~ 322 (351)
+||++..
T Consensus 296 ~fl~~~~ 302 (316)
T 3afi_E 296 GWIAGIE 302 (316)
T ss_dssp HHHHHHH
T ss_pred HHHhhcC
Confidence 9998653
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=258.34 Aligned_cols=263 Identities=17% Similarity=0.183 Sum_probs=174.0
Q ss_pred cccccCCeEEEEEEcCC-CCCeEEEEecCCCCcc-chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+++.+|.+++|...|+ +.|+|||+||++++.. .|.++++.|++ +|+|+++|+||
T Consensus 6 ~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G 62 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLE-----------------------GFRVVYFDQRG 62 (286)
T ss_dssp EEEECSSCEEEEEEESCTTSCEEEEECCTTTCCSHHHHHHHGGGCT-----------------------TSEEEEECCTT
T ss_pred eEEeECCEEEEEEeecCCCCCEEEEECCCCCcchhHHHHHHHHhcC-----------------------CCEEEEECCCC
Confidence 46778999999999994 3467999999999999 89999999975 99999999999
Q ss_pred CCCCCC-CCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 96 MGRSSV-PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 96 ~G~S~~-~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
||.|+. +.....++++++++|+.++++.++.++++|+||||||.+|+.+|.++|+ |+++|++++.. .....
T Consensus 63 ~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~-------~~~~~ 134 (286)
T 2yys_A 63 SGRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV-------NFPWL 134 (286)
T ss_dssp STTSCCCCSCGGGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC-------BHHHH
T ss_pred CCCCCCCccCcccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc-------CcHHH
Confidence 999987 4421268999999999999999999999999999999999999999999 99999999863 11110
Q ss_pred hhHHHHhh---cccCC-HHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 175 TLSIAIRF---FRAKT-PEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 175 ~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
....... ..... ....... ............+. .................... ........+ .+.....
T Consensus 135 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~ 207 (286)
T 2yys_A 135 -AARLAEAAGLAPLPDPEENLKEA-LKREEPKALFDRLM-FPTPRGRMAYEWLAEGAGIL--GSDAPGLAF--LRNGLWR 207 (286)
T ss_dssp -HHHHHHHTTCCCCSCHHHHHHHH-HHHSCHHHHHHHHH-CSSHHHHHHHHHHHHHTTCC--CCSHHHHHH--HHTTGGG
T ss_pred -HHHHHHHhccccchhHHHHHHHH-hccCChHHHHHhhh-ccCCccccChHHHHHHHhhc--cccccchhh--ccccccc
Confidence 0000000 00000 0000000 00000001111111 00000000011111100000 000000000 0000000
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.+....+.++++|+|+|+|++|.+++++ ++.+.+ + ++++++++++ ||++++|+|+++++.|.+||++.
T Consensus 208 ~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 208 LDYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-R-LRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp CBCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-H-HTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred CChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-C-CCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 1123457789999999999999999999 998888 7 8999999998 99999999999999999999864
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=254.32 Aligned_cols=256 Identities=21% Similarity=0.325 Sum_probs=174.8
Q ss_pred ccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 21 ~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
+.+|.+++|...|+++ +|||+||++++...|..+++.|.+ +||+|+++|+||||.|+
T Consensus 9 ~~~g~~l~y~~~g~g~-pvvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G~S~ 65 (277)
T 1brt_A 9 NSTSIDLYYEDHGTGQ-PVVLIHGFPLSGHSWERQSAALLD----------------------AGYRVITYDRRGFGQSS 65 (277)
T ss_dssp TTEEEEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTSC
T ss_pred cCCCcEEEEEEcCCCC-eEEEECCCCCcHHHHHHHHHHHhh----------------------CCCEEEEeCCCCCCCCC
Confidence 5678999999999766 599999999999999999999987 58999999999999998
Q ss_pred CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCCCCCCCCc-----cchh
Q 018750 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK-----LDLQ 174 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~-----~~~~ 174 (351)
.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|+ +|+++|++++..+....... ....
T Consensus 66 ~~~--~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (277)
T 1brt_A 66 QPT--TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQE 143 (277)
T ss_dssp CCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHH
T ss_pred CCC--CCccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHH
Confidence 765 468999999999999999999999999999999999999999998 99999999985322110000 0000
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc-----CCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG-----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
............... ........++. ...........+.+....... ......+.. .
T Consensus 144 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~ 205 (277)
T 1brt_A 144 FFDGIVAAVKADRYA----------FYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF---FAAAAAPTT-----W 205 (277)
T ss_dssp HHHHHHHHHHHCHHH----------HHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCH---HHHHHGGGG-----T
T ss_pred HHHHHHHHHhcCchh----------hHHHHHHHHhhccccccccCCHHHHHHHHHHHhccch---HHHHHHHHH-----H
Confidence 000000000000000 00001111110 000011111111111110000 000000000 0
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+....+.++++|+|+|+|++|.++|++.+ +.+.+.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 206 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 206 YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred hccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHC-CCCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 1112245788999999999999999998887 8888876 8999999998 9999999999999999999963
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=255.73 Aligned_cols=262 Identities=20% Similarity=0.246 Sum_probs=176.5
Q ss_pred ccccCC-eEEEEEEcCCCC-CeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 19 ALNDNG-IKIFYRTYGRGP-TKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 19 ~~~~~g-~~l~y~~~g~~~-p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
+++.+| .+++|...|+++ |+|||+||++ ++...|..+++.|.+ +|+|+++|+
T Consensus 17 ~~~~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~-----------------------~~~via~Dl 73 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLAR-----------------------HFHVLAVDQ 73 (291)
T ss_dssp EEESSSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHHTTTTHHHHTT-----------------------TSEEEEECC
T ss_pred EEEeCCcEEEEEEecCCCCCCcEEEECCCCCccchHHHHHHHHHHHHh-----------------------cCEEEEECC
Confidence 677899 999999999765 4799999997 777789999999987 799999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
||||.|+.+.. ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.............
T Consensus 74 ~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 152 (291)
T 2wue_A 74 PGYGHSDKRAE-HGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPT 152 (291)
T ss_dssp TTSTTSCCCSC-CSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSC
T ss_pred CCCCCCCCCCC-CCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccc
Confidence 99999987653 36899999999999999999999999999999999999999999999999999987532111110001
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhh--hhcc--c
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHA--CWMH--K 248 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 248 (351)
.................. ...+........ ............... ...+...+.. .+.. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 217 (291)
T 2wue_A 153 EGVKRLSKFSVAPTRENL----------EAFLRVMVYDKNLITPELVDQRFALAST-----PESLTATRAMGKSFAGADF 217 (291)
T ss_dssp HHHHHHHHHHHSCCHHHH----------HHHHHTSCSSGGGSCHHHHHHHHHHHTS-----HHHHHHHHHHHHHHTSTTG
T ss_pred hhhHHHHHHhccCCHHHH----------HHHHHHhccCcccCCHHHHHHHHHHhcC-----chHHHHHHHHHhhcccccc
Confidence 111111111110000000 000000000000 000000100000000 0000000000 0000 0
Q ss_pred CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
........+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 218 ~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 218 EAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp GGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHS-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred ccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHC-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 000111457889999999999999999999999998876 8999999998 9999999999999999999964
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=257.75 Aligned_cols=270 Identities=19% Similarity=0.216 Sum_probs=173.0
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
...+++.+|.+++|...|++ |+|||+||++++...|.++++.|++ .|+|+++|+||
T Consensus 10 ~~~~~~~~g~~l~y~~~G~g-~~lvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G 65 (294)
T 1ehy_A 10 KHYEVQLPDVKIHYVREGAG-PTLLLLHGWPGFWWEWSKVIGPLAE-----------------------HYDVIVPDLRG 65 (294)
T ss_dssp CEEEEECSSCEEEEEEEECS-SEEEEECCSSCCGGGGHHHHHHHHT-----------------------TSEEEEECCTT
T ss_pred ceeEEEECCEEEEEEEcCCC-CEEEEECCCCcchhhHHHHHHHHhh-----------------------cCEEEecCCCC
Confidence 34567889999999999965 4699999999999999999999998 79999999999
Q ss_pred CCCCCCCCCC---CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 96 MGRSSVPVKK---TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 96 ~G~S~~~~~~---~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||.|+.+ .. ..|+++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..++... ....
T Consensus 66 ~G~S~~~-~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~~ 143 (294)
T 1ehy_A 66 FGDSEKP-DLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGP-VYFG 143 (294)
T ss_dssp STTSCCC-CTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-------
T ss_pred CCCCCCC-ccccccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcch-hhcc
Confidence 9999876 20 16899999999999999999999999999999999999999999999999999975322110 0000
Q ss_pred hh----hhHHHHhhcccCCHHHHhhcCcc---ccccHHHHHHhhcC-CchhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 173 LQ----TLSIAIRFFRAKTPEKRAAVDLD---THYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 173 ~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
.. .+.. .+.......... .... ..+...++...... ........+.+.+.+..... ...........
T Consensus 144 ~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 218 (294)
T 1ehy_A 144 LGHVHESWYS--QFHQLDMAVEVV-GSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDN--IHGGFNYYRAN 218 (294)
T ss_dssp -----CCHHH--HHTTCHHHHHHH-TSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTH--HHHHHHHHHHH
T ss_pred chhccCceEE--EecCcchhHHHh-ccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcc--cchHHHHHHHH
Confidence 00 0000 000000000000 0000 00001111111110 01111111111111110000 00000000000
Q ss_pred hcccCCHHH-HHHhhccCccEEEEeecCCccCC-HHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 245 WMHKMTQKD-IQTIRSAGFLVSVIHGRHDVIAQ-ICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 245 ~~~~~~~~~-~~~l~~i~~Pvlii~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
........ ...+.++++|+|+|+|++|.++| .+..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+||
T Consensus 219 -~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 219 -IRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp -SSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred -HhhhhhhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHc-CCCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 00000000 01455899999999999999998 46677777764 8999999998 99999999999999999997
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=248.75 Aligned_cols=246 Identities=23% Similarity=0.327 Sum_probs=172.1
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCC-ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGT-HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..+++.+|.+++|...|+++|+|||+||++++ ...|.++++.|.+ +||+|+++|+||
T Consensus 4 ~~~~~~~g~~l~~~~~g~~~~~vvllHG~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G 61 (254)
T 2ocg_A 4 SAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNK----------------------KLFTVVAWDPRG 61 (254)
T ss_dssp EEEEEETTEEEEEEEEECCSEEEEEECCTTCCHHHHCHHHHHHSCT----------------------TTEEEEEECCTT
T ss_pred eeEEEECCEEEEEEEecCCCCeEEEECCCCCCCccchHHHHHHHhh----------------------CCCeEEEECCCC
Confidence 34567899999999999887789999999988 6779999999987 689999999999
Q ss_pred CCCCCCCCCCCccc---hHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 96 MGRSSVPVKKTEYT---TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 96 ~G~S~~~~~~~~~~---~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||.|+.+. ..++ +.+.++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++... ..
T Consensus 62 ~G~S~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-------~~ 132 (254)
T 2ocg_A 62 YGHSRPPD--RDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAY-------VT 132 (254)
T ss_dssp STTCCSSC--CCCCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSB-------CC
T ss_pred CCCCCCCC--CCCChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccc-------cC
Confidence 99998654 2445 678899999999999999999999999999999999999999999999987521 11
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
.... ........... ..... ...+........ .......+...+.. .........
T Consensus 133 ~~~~-~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~ 187 (254)
T 2ocg_A 133 DEDS-MIYEGIRDVSK-------WSERT-RKPLEALYGYDY-FARTCEKWVDGIRQ---------------FKHLPDGNI 187 (254)
T ss_dssp HHHH-HHHHTTSCGGG-------SCHHH-HHHHHHHHCHHH-HHHHHHHHHHHHHG---------------GGGSGGGBS
T ss_pred hhhH-HHHHHHHHHHH-------HHHHh-HHHHHHHhcchh-hHHHHHHHHHHHHH---------------HHhccCCch
Confidence 1100 00000000000 00000 000000000000 00001111111100 000000001
Q ss_pred HHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.++|+++++.|.+||+
T Consensus 188 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 188 CRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp SGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred hhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhC-CCCEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 12456789999999999999999999999999876 8999999998 999999999999999999983
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=254.52 Aligned_cols=263 Identities=21% Similarity=0.281 Sum_probs=177.4
Q ss_pred CccccccCCeEEEEEEcC-CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 16 PDAALNDNGIKIFYRTYG-RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g-~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
...+++.+|.+++|...| +++|+|||+||++ ++...|..+++.|.+ +|+|+++
T Consensus 8 ~~~~~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~-----------------------~~~vi~~ 64 (285)
T 1c4x_A 8 IEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-----------------------NFFVVAP 64 (285)
T ss_dssp EEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-----------------------TSEEEEE
T ss_pred cceEEEECCEEEEEEecCCCCCCEEEEEeCCCCCCcchhhHHHHHHHHhh-----------------------CcEEEEe
Confidence 356788899999999999 6666699999997 667789999999987 7999999
Q ss_pred cCCCCCCCCCCCCCCccchHhH----HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 018750 92 DNRGMGRSSVPVKKTEYTTKIM----AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~----~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
|+||||.|+.+.. ..++++++ ++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 65 D~~G~G~S~~~~~-~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~ 143 (285)
T 1c4x_A 65 DLIGFGQSEYPET-YPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNA 143 (285)
T ss_dssp CCTTSTTSCCCSS-CCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSS
T ss_pred cCCCCCCCCCCCC-cccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCc
Confidence 9999999986653 25789999 999999999999999999999999999999999999999999999986432111
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-h--hhhhHHHHHhhhhhccCCCCCCcchhh--h
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-R--RAILYQEYVKGISATGMQSNYGFDGQI--H 242 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 242 (351)
. ................... ...+........ . ................. ...+.... .
T Consensus 144 ~----~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 207 (285)
T 1c4x_A 144 R----PPELARLLAFYADPRLTPY----------RELIHSFVYDPENFPGMEEIVKSRFEVANDPEV--RRIQEVMFESM 207 (285)
T ss_dssp C----CHHHHHHHTGGGSCCHHHH----------HHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHH--HHHHHHHHHHH
T ss_pred c----chhHHHHHHHhccccHHHH----------HHHHHHhhcCcccccCcHHHHHHHHHhccCHHH--HHHHHHHhccc
Confidence 0 0111111111110000000 000000000000 0 00000000000000000 00000000 0
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+... .......+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||.+
T Consensus 208 ~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 208 KAGMES-LVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp SSCCGG-GCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred cccccc-cccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhC-CCceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 000000 00123567889999999999999999999999999876 8999999998 9999999999999999999974
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=254.15 Aligned_cols=262 Identities=19% Similarity=0.294 Sum_probs=176.8
Q ss_pred ccccccC--C--eEEEEEEcCCCCCeEEEEecCC---CCccchHHHH-HHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 17 DAALNDN--G--IKIFYRTYGRGPTKVILITGLA---GTHDAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 17 ~~~~~~~--g--~~l~y~~~g~~~p~vv~~HG~~---~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
.++++++ | .+++|...|+++++|||+||++ ++...|..++ +.|.+ +|+|
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v 69 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEA-----------------------GYRV 69 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCSSEEEEECCCSTTCCHHHHTTTTHHHHHHT-----------------------TCEE
T ss_pred ceEEEEcCCCcEEEEEEeccCCCCceEEEECCCCcccchhHHHHHhhhHHHhc-----------------------CCeE
Confidence 4567777 8 9999999998765899999997 6667788888 88887 7999
Q ss_pred EEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 018750 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (351)
+++|+||||.|+.+.. ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 70 i~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 148 (289)
T 1u2e_A 70 ILLDCPGWGKSDSVVN-SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLF 148 (289)
T ss_dssp EEECCTTSTTSCCCCC-SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS
T ss_pred EEEcCCCCCCCCCCCc-cccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccc
Confidence 9999999999987653 367999999999999999999999999999999999999999999999999999865322111
Q ss_pred CccchhhhHHHHhhcccCCHHHHh----hcC-ccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhh
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRA----AVD-LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (351)
........................ ... .......+..................+...+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 216 (289)
T 1u2e_A 149 TPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPK------------ 216 (289)
T ss_dssp SCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSC------------
T ss_pred cccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccc------------
Confidence 111111111111111100000000 000 000000111110000000000000111110000000
Q ss_pred hhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
...+....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 217 -----~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 217 -----QFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp -----CSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHS-TTCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred -----cccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhC-CCcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 000112456788999999999999999999999999876 8999999998 9999999999999999999964
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=257.20 Aligned_cols=254 Identities=19% Similarity=0.264 Sum_probs=168.0
Q ss_pred EEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 27 l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
|+|...|+ +.|+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+.
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~ 59 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQ-----------------------EYQVVCYDQRGTGNNPDTL 59 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHT-----------------------TSEEEECCCTTBTTBCCCC
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhh-----------------------cCeEEEECCCCCCCCCCCc
Confidence 66777775 356899999999999999999999987 8999999999999998654
Q ss_pred CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhc
Q 018750 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (351)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (351)
. ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.... ...............
T Consensus 60 ~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~----~~~~~~~~~~~~~~~ 134 (268)
T 3v48_A 60 A-EDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRI----NAHTRRCFQVRERLL 134 (268)
T ss_dssp C-TTCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBC----CHHHHHHHHHHHHHH
T ss_pred c-ccCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEecccccc----chhhhHHHHHHHHHH
Confidence 3 46899999999999999999999999999999999999999999999999999875211 000000000000000
Q ss_pred ccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCcc
Q 018750 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (351)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (351)
................+...+.. ... ............. ......+...+...... +....+.++++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----d~~~~l~~i~~P 202 (268)
T 3v48_A 135 YSGGAQAWVEAQPLFLYPADWMA----ARA--PRLEAEDALALAH--FQGKNNLLRRLNALKRA----DFSHHADRIRCP 202 (268)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHH----TTH--HHHHHHHHHHHHT--CCCHHHHHHHHHHHHHC----BCTTTGGGCCSC
T ss_pred hccchhhhhhhhhhhcCchhhhh----ccc--ccchhhHHHHHhh--cCchhHHHHHHHHHhcc----chhhhhhcCCCC
Confidence 00000000000000000000000 000 0000000000000 00000000001110000 112456889999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 264 vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+||.+.
T Consensus 203 ~Lii~G~~D~~~p~~~~~~l~~~~-p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 203 VQIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVTDPETFNALLLNGLASL 260 (268)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESSCCTTHHHHCHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCcccCHHHHHHHHHhC-CcCeEEEeCCCCcchhhcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999986 9999999997 99999999999999999999864
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=255.02 Aligned_cols=258 Identities=20% Similarity=0.254 Sum_probs=170.3
Q ss_pred cccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC
Q 018750 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~ 98 (351)
.+.+|.+++|...|+ ..|+|||+||++++...|..+++.|.+ +||+|+++|+||||.
T Consensus 5 ~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~D~~G~G~ 62 (276)
T 1zoi_A 5 TTKDGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLA----------------------HGYRVVAHDRRGHGR 62 (276)
T ss_dssp ECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTT
T ss_pred ECCCCcEEEEEecCCCCCCeEEEECCCCcchhHHHHHHHHHHh----------------------CCCEEEEecCCCCCC
Confidence 345799999999984 345799999999999999999999987 589999999999999
Q ss_pred CCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCcc----ch
Q 018750 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKL----DL 173 (351)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~----~~ 173 (351)
|+.+. ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++ |++|+++|++++..+........ ..
T Consensus 63 S~~~~--~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 140 (276)
T 1zoi_A 63 SSQVW--DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPK 140 (276)
T ss_dssp SCCCS--SCCSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCH
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccH
Confidence 98654 4689999999999999999999999999999999999988887 99999999999764321111000 00
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHH-HhhcCC----chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-EYVGSS----TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
................ +...... .+.... .........+......... ......... +
T Consensus 141 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~--- 203 (276)
T 1zoi_A 141 SVFDGFQAQVASNRAQ----------FYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSA---KAHYDGIVA-F--- 203 (276)
T ss_dssp HHHHHHHHHHHHCHHH----------HHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCH---HHHHHHHHH-H---
T ss_pred HHHHHHHHHHHHhHHH----------HHHHhhhccccccccccccccHHHHHHHHhhhhhhhH---HHHHHHHHH-h---
Confidence 0000000000000000 0000000 000000 0000111111110000000 000000000 0
Q ss_pred CCHHHHHHhhccCccEEEEeecCCccCCHH-HHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
...+..+.++++++|+|+|+|++|.++|++ ..+.+.+. .++++++++++ ||++++++|+++++.|.+||+
T Consensus 204 ~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 204 SQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKL-LPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp HSCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred cccchhhhccccCCCEEEEEcCCCcccChHHHHHHHHhh-CCCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 011234567889999999999999999987 44555554 48999999998 999999999999999999995
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=251.53 Aligned_cols=257 Identities=14% Similarity=0.147 Sum_probs=169.5
Q ss_pred cccccCCeEEEEEEc--CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 18 AALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~--g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+++.+|.+++|.+. |++.|+|||+||++++...|.++++.|++ +|+||++|+||
T Consensus 7 ~~~~~~g~~l~y~~~~~G~~~p~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~rvia~DlrG 63 (276)
T 2wj6_A 7 HETLVFDNKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELDA-----------------------DFRVIVPNWRG 63 (276)
T ss_dssp EEEEETTEEEEEEECCCCCSSCEEEEECCTTCCGGGGHHHHHHHTT-----------------------TSCEEEECCTT
T ss_pred eEEeeCCeEEEEEEecCCCCCCeEEEECCCCCcHHHHHHHHHHHhc-----------------------CCEEEEeCCCC
Confidence 356778999999999 87767899999999999999999999987 89999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCccchh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
||.|+.+. ..|+++++++|+.+++++++.++++|+||||||.+|+.+|.++ |++|+++|++++.... + ...
T Consensus 64 hG~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~----~--~~~ 135 (276)
T 2wj6_A 64 HGLSPSEV--PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWA----P--KPD 135 (276)
T ss_dssp CSSSCCCC--CCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSS----C--CHH
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccC----C--Cch
Confidence 99998764 4689999999999999999999999999999999999999999 9999999999875211 0 000
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh---hhhhhcccCCH
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ---IHACWMHKMTQ 251 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 251 (351)
................ .....+..+..... .....+.+....... ....+... ....+.. . .
T Consensus 136 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~-~ 200 (276)
T 2wj6_A 136 FAKSLTLLKDPERWRE---------GTHGLFDVWLDGHD-EKRVRHHLLEEMADY---GYDCWGRSGRVIEDAYGR-N-G 200 (276)
T ss_dssp HHHHHHHHHCTTTHHH---------HHHHHHHHHHTTBC-CHHHHHHHHTTTTTC---CHHHHHHHHHHHHHHHHH-H-C
T ss_pred HHHHhhhccCcchHHH---------HHHHHHHHhhcccc-hHHHHHHHHHHhhhc---chhhhhhccchhHHHHhh-c-c
Confidence 0000000000000000 00011111111100 000111111100000 00000000 0000000 0 0
Q ss_pred HHHHHhhccCccEEEEeecCCccCC--HHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQ--ICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.....+..+++|+++++|..|...+ ....+.+.+.+ |+++++++++ ||++++|+|++|++.|.+||++.
T Consensus 201 ~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~-p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 201 SPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp CHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHC-TTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred chhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhC-CCeEEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 1234677889999998874433222 34456677765 8999999998 99999999999999999999764
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=251.77 Aligned_cols=258 Identities=22% Similarity=0.301 Sum_probs=169.9
Q ss_pred ccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC
Q 018750 19 ALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~ 98 (351)
+.+.+|.+++|..+|+++ +|||+||++++...|..+++.|.+ +||+|+++|+||||.
T Consensus 3 ~~~~~g~~l~y~~~g~g~-~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G~ 59 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWGQGR-PVVFIHGWPLNGDAWQDQLKAVVD----------------------AGYRGIAHDRRGHGH 59 (274)
T ss_dssp EECTTSCEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTT
T ss_pred EEccCCCEEEEEecCCCc-eEEEECCCcchHHHHHHHHHHHHh----------------------CCCeEEEEcCCCCCC
Confidence 345689999999999664 699999999999999999999987 589999999999999
Q ss_pred CCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCc----cch
Q 018750 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK----LDL 173 (351)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~----~~~ 173 (351)
|+.+. ..++++++++|+.+++++++.++++|+||||||.+++.++.++ |++|+++|++++..+....... ...
T Consensus 60 S~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 137 (274)
T 1a8q_A 60 STPVW--DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPD 137 (274)
T ss_dssp SCCCS--SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCH
T ss_pred CCCCC--CCCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchH
Confidence 98654 4679999999999999999999999999999999999988776 9999999999975422111000 000
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC----chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS----TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
............ ... .+.......+.... .......+.+....... ........... +.
T Consensus 138 ~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~--- 200 (274)
T 1a8q_A 138 EVFDALKNGVLT----ERS------QFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQ---TIEGGVRCVDA-FG--- 200 (274)
T ss_dssp HHHHHHHHHHHH----HHH------HHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTS---CHHHHHHHHHH-HH---
T ss_pred HHHHHHHHHhhc----cHH------HHHHHhcccccccccccccccHHHHHHHHHHhhhc---ChHHHHHHHhh-hh---
Confidence 000000000000 000 00000000111100 00011111111100000 00000000000 00
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-Ccccccc--ChHHHHHHHHHHHH
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHE--RTEEVNQALIDLIK 319 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~--~p~~~~~~i~~fl~ 319 (351)
..+....+.++++|+|+|+|++|.++|++.. +.+.+. .++++++++++ ||+++.+ +|+++++.|.+||+
T Consensus 201 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 201 YTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQI-IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp HCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHH-STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred cCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhh-CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 0122356788999999999999999998844 445554 58999999998 9999999 99999999999995
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=252.14 Aligned_cols=256 Identities=12% Similarity=0.149 Sum_probs=170.1
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 102 (351)
.+.+++|.+.|+++ +|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+
T Consensus 4 ~~~~~~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~ 59 (269)
T 2xmz_A 4 THYKFYEANVETNQ-VLVFLHGFLSDSRTYHNHIEKFTD-----------------------NYHVITIDLPGHGEDQSS 59 (269)
T ss_dssp CSEEEECCSSCCSE-EEEEECCTTCCGGGGTTTHHHHHT-----------------------TSEEEEECCTTSTTCCCC
T ss_pred ccceEEEEEcCCCC-eEEEEcCCCCcHHHHHHHHHHHhh-----------------------cCeEEEecCCCCCCCCCC
Confidence 47899999999886 599999999999999999999997 799999999999999876
Q ss_pred CCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhh
Q 018750 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (351)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (351)
.. ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.... .... .........
T Consensus 60 ~~-~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~----~~~~-~~~~~~~~~ 133 (269)
T 2xmz_A 60 MD-ETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGI----KEEA-NQLERRLVD 133 (269)
T ss_dssp TT-SCCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCC----SSHH-HHHHHHHHH
T ss_pred CC-CccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCccc----CCch-hHHHHhhhh
Confidence 53 26799999999999999999999999999999999999999999999999999975311 0000 000000000
Q ss_pred cccCCHHHHhhcCccccccHHHHHHhhcCC--c----hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHH
Q 018750 183 FRAKTPEKRAAVDLDTHYSQEYLEEYVGSS--T----RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (351)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (351)
.. ........ ....+...+.... . ......+.+....... ....+...+... ......+..+.
T Consensus 134 -~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~ 202 (269)
T 2xmz_A 134 -DA-RAKVLDIA-----GIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQ---SPHKMAKALRDY-GTGQMPNLWPR 202 (269)
T ss_dssp -HH-HHHHHHHH-----CHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTS---CHHHHHHHHHHH-STTTSCCCGGG
T ss_pred -hH-HHHhhccc-----cHHHHHHHHHhCccccccccCCHHHHHHHHHHHhcc---CcHHHHHHHHHH-HhccCccHHHH
Confidence 00 00000000 0000111110000 0 0000001111100000 000000000000 00011112346
Q ss_pred hhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 257 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+.++++|+|+|+|++|.+++++..+ +.+.+ ++++++++++ ||++++|+|+++++.|.+||++.
T Consensus 203 l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 203 LKEIKVPTLILAGEYDEKFVQIAKK-MANLI-PNSKCKLISATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp GGGCCSCEEEEEETTCHHHHHHHHH-HHHHS-TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEeCCCcccCHHHHH-HHhhC-CCcEEEEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 7889999999999999999988765 77765 8999999998 99999999999999999999864
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=248.44 Aligned_cols=259 Identities=21% Similarity=0.291 Sum_probs=170.1
Q ss_pred ccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC
Q 018750 19 ALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~ 98 (351)
+.+.+|.+++|...|++ |+|||+||++++...|..+++.|.+ +||+|+++|+||||.
T Consensus 3 ~~~~~g~~l~y~~~g~~-~~vvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G~ 59 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAA----------------------QGYRVIAHDRRGHGR 59 (273)
T ss_dssp EECTTSCEEEEEEESCS-SEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTT
T ss_pred EecCCCcEEEEEEcCCC-CEEEEECCCCCcHHHHhhHHhhHhh----------------------CCcEEEEECCCCCCC
Confidence 34568999999999966 4699999999999999999999987 589999999999999
Q ss_pred CCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCc----cch
Q 018750 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK----LDL 173 (351)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~----~~~ 173 (351)
|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.++.++ |++|+++|++++..+....... ...
T Consensus 60 S~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 137 (273)
T 1a8s_A 60 SSQPW--SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPM 137 (273)
T ss_dssp SCCCS--SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCH
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcH
Confidence 98654 3679999999999999999999999999999999999988776 9999999999975432111110 000
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHH-HhhcCC----chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-EYVGSS----TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
................ +...... .+.... .........+......... ......... +.
T Consensus 138 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~-- 201 (273)
T 1a8s_A 138 EVFDGIRQASLADRSQ----------LYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH---KNAYDCIKA-FS-- 201 (273)
T ss_dssp HHHHHHHHHHHHHHHH----------HHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCH---HHHHHHHHH-HH--
T ss_pred HHHHHHHHHhHhhHHH----------HHHHhhcccccCcCCcccccCHHHHHHHHHhccccch---hHHHHHHHH-Hh--
Confidence 0000000000000000 0000000 000000 0000111111110000000 000000000 00
Q ss_pred CCHHHHHHhhccCccEEEEeecCCccCCHHH-HHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+....+.++++|+|+|+|++|.++|++. .+.+.+. .++++++++++ ||+++.++|+++++.|.+||++
T Consensus 202 -~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 202 -ETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAAL-VKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp -HCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred -ccChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHh-CCCcEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 011235678899999999999999999874 4455554 48999999998 9999999999999999999963
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=248.74 Aligned_cols=265 Identities=19% Similarity=0.251 Sum_probs=173.0
Q ss_pred ccccccCCeEEEEEEcCCC--CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 17 DAALNDNGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~--~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
..+.+.+|.+++|...|++ .|+|||+||++++...|..+++.|.+ +|+|+++|+|
T Consensus 8 ~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~ 64 (285)
T 3bwx_A 8 RYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAG-----------------------DWRVLCPEMR 64 (285)
T ss_dssp EEEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGGGGHHHHHHHBB-----------------------TBCEEEECCT
T ss_pred CeeecCCCceEEEEEcCCCCCCCcEEEECCCCcchhhHHHHHHHhhc-----------------------CCEEEeecCC
Confidence 3466779999999999873 56799999999999999999999987 9999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|||.|+.+.....++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+ .....
T Consensus 65 G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~-------~~~~~ 137 (285)
T 3bwx_A 65 GRGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP-------EVSPE 137 (285)
T ss_dssp TBTTSCCCSSGGGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS-------SCCHH
T ss_pred CCCCCCCCCCccccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCc-------ccCcc
Confidence 99999876433468999999999999999999999999999999999999999999999999987542 11111
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc--hhhhhHHHHHh-hhhhccCC-CCCCcchhhhhhhc----
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVK-GISATGMQ-SNYGFDGQIHACWM---- 246 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~---- 246 (351)
............... .........+........ ........+.. .+...... ....+.......+.
T Consensus 138 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (285)
T 3bwx_A 138 GLERIRGYVGQGRNF------ETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVG 211 (285)
T ss_dssp HHHHHHHHTTCCCEE------SSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTT
T ss_pred hhHHHHHHhcCCccc------ccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhh
Confidence 111111111000000 000000001111110000 00000011111 01000000 00000000000000
Q ss_pred ccCCHHHHHHhhcc-CccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 247 HKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 247 ~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.....+....+.++ ++|+|+|+|++|.+++++..+.+.+. ++++++++++ ||++++|+|+.+ +.|.+||++
T Consensus 212 ~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 212 ATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp CCCSSCCHHHHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS--TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred ccccchhhHHHHHccCCCeEEEEeCCCCccCHHHHHHHHhC--CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 00111222334455 79999999999999999999988885 8999999998 999999999987 579999964
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=249.52 Aligned_cols=279 Identities=17% Similarity=0.208 Sum_probs=188.1
Q ss_pred CCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+..+++.+|.+++|...|++ |+|||+||++++...|..++..|.. +||+|+++|+|
T Consensus 9 ~~~~~~~~~g~~l~~~~~g~~-~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~ 65 (309)
T 3u1t_A 9 FAKRTVEVEGATIAYVDEGSG-QPVLFLHGNPTSSYLWRNIIPYVVA----------------------AGYRAVAPDLI 65 (309)
T ss_dssp CCCEEEEETTEEEEEEEEECS-SEEEEECCTTCCGGGGTTTHHHHHH----------------------TTCEEEEECCT
T ss_pred ccceEEEECCeEEEEEEcCCC-CEEEEECCCcchhhhHHHHHHHHHh----------------------CCCEEEEEccC
Confidence 457788899999999999985 5799999999999999999999544 49999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch-
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL- 173 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~- 173 (351)
|||.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........+....
T Consensus 66 G~G~S~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 143 (309)
T 3u1t_A 66 GMGDSAKPD--IEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAM 143 (309)
T ss_dssp TSTTSCCCS--SCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGG
T ss_pred CCCCCCCCC--cccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCcccccccccc
Confidence 999998865 37899999999999999999999999999999999999999999999999999987543311111111
Q ss_pred -hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccC----------CCCCCcchhhh
Q 018750 174 -QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM----------QSNYGFDGQIH 242 (351)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 242 (351)
.........+........... ....+...++................+...+..... ...........
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 144 GPQLGPLFRDLRTADVGEKMVL-DGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHT-TTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred chhhhHHHHHHhccchhhhhcc-ccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhh
Confidence 111111111111111110000 001111111111100001111111111111000000 00000000000
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
....+....+.++++|+|+|+|++|.++|++..+.+.+.+ ++.+++++++ ||+++.++|+++++.|.+||++.
T Consensus 223 -----~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 296 (309)
T 3u1t_A 223 -----AEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENV-PNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRN 296 (309)
T ss_dssp -----HHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred -----hhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhC-CCCEEEEecCCcccchhhCHHHHHHHHHHHHHhc
Confidence 0112344567889999999999999999999999999986 8888888887 99999999999999999999998
Q ss_pred CCCC
Q 018750 322 EKKI 325 (351)
Q Consensus 322 ~~~~ 325 (351)
....
T Consensus 297 ~~~~ 300 (309)
T 3u1t_A 297 KPHA 300 (309)
T ss_dssp CCCC
T ss_pred chhh
Confidence 7654
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=255.95 Aligned_cols=269 Identities=19% Similarity=0.268 Sum_probs=174.7
Q ss_pred CccccccCCeEEEEEEcCC--C---CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 16 PDAALNDNGIKIFYRTYGR--G---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~--~---~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
.+.+++++|.+++|...|+ + .++|||+||++++...|..++..|.+. .+|+|++
T Consensus 29 ~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~---------------------~~~~Via 87 (330)
T 3nwo_A 29 SSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADE---------------------TGRTVIH 87 (330)
T ss_dssp CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHH---------------------HTCCEEE
T ss_pred cceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccc---------------------cCcEEEE
Confidence 4567889999999999997 2 226999999999999998888888720 2899999
Q ss_pred ecCCCCCCCCCCC--CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 018750 91 FDNRGMGRSSVPV--KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 91 ~D~~G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (351)
+|+||||.|+... ....++++++++|+.++++.++.++++|+||||||++|+.+|.++|++|.++|++++..
T Consensus 88 ~D~rG~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~------ 161 (330)
T 3nwo_A 88 YDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPA------ 161 (330)
T ss_dssp ECCTTSTTSCCCTTSCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCS------
T ss_pred ECCCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCc------
Confidence 9999999998632 22357899999999999999999999999999999999999999999999999998753
Q ss_pred CccchhhhHHHHhhcccCCHHHHhh--------cCccccc---cHHHHHHhhcCC-chhhhhHHHHHhh------hhhcc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAA--------VDLDTHY---SQEYLEEYVGSS-TRRAILYQEYVKG------ISATG 230 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~ 230 (351)
..... .................. ......+ ...+........ .........+... +....
T Consensus 162 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (330)
T 3nwo_A 162 -SMRLW-SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMN 239 (330)
T ss_dssp -BHHHH-HHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHT
T ss_pred -chHHH-HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhccc
Confidence 11100 000000000000000000 0000000 000111111100 0000111110000 00000
Q ss_pred CCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHH
Q 018750 231 MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~ 309 (351)
....+.....+ ...+..+.+.+|++|+|+|+|++|.++| ...+++.+.+ ++++++++++ ||++++|+|++
T Consensus 240 ~~~~~~~~~~~-------~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i-p~~~~~~i~~~gH~~~~e~p~~ 310 (330)
T 3nwo_A 240 GPNEFHVVGTL-------GDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI-PDVRSHVFPGTSHCTHLEKPEE 310 (330)
T ss_dssp CSCSSSCCSGG-------GGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHC-SSEEEEEETTCCTTHHHHSHHH
T ss_pred Cchhhhhhccc-------cCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhC-CCCcEEEeCCCCCchhhcCHHH
Confidence 00000000000 0011234678899999999999999876 4677788875 9999999998 99999999999
Q ss_pred HHHHHHHHHHhcC
Q 018750 310 VNQALIDLIKASE 322 (351)
Q Consensus 310 ~~~~i~~fl~~~~ 322 (351)
|++.|.+||++..
T Consensus 311 ~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 311 FRAVVAQFLHQHD 323 (330)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998753
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=247.17 Aligned_cols=260 Identities=23% Similarity=0.282 Sum_probs=170.2
Q ss_pred ccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
+.+.+|.+++|...|+ +.|+|||+||++++...|..+++.|.+ +||+|+++|+||||
T Consensus 3 ~~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G 60 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLS----------------------HGYRVIAHDRRGHG 60 (275)
T ss_dssp EECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTST
T ss_pred EEccCCCEEEEEEcCCCCCceEEEECCCCCchhhHHHHHHHHHH----------------------CCceEEEEcCCcCC
Confidence 3456899999999984 345799999999999999999999987 58999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCc----cc
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK----LD 172 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~----~~ 172 (351)
.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.++.++ |++|+++|++++..+....... ..
T Consensus 61 ~S~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 138 (275)
T 1a88_A 61 RSDQPS--TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP 138 (275)
T ss_dssp TSCCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBC
T ss_pred CCCCCC--CCCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCC
Confidence 998654 3679999999999999999999999999999999999988887 9999999999976432110000 00
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHH-HhhcCC----chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-EYVGSS----TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
................. +...... .+.... .........+......... ......... +.
T Consensus 139 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~- 203 (275)
T 1a88_A 139 LEVFDEFRAALAANRAQ----------FYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAA---NAHYECIAA-FS- 203 (275)
T ss_dssp HHHHHHHHHHHHHCHHH----------HHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCH---HHHHHHHHH-HH-
T ss_pred HHHHHHHHHHHhhhHHH----------HHHhhhccccccccCcccccCHHHHHHHHHHhhhcch---HhHHHHHhh-hh-
Confidence 00000000000000000 0000000 000000 0001111111110000000 000000000 00
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHH-HHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+....+.++++|+|+|+|++|.++|++. .+.+.+. .++++++++++ ||+++.++|+++++.|.+||++
T Consensus 204 --~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 204 --ETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAEL-LANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp --HCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred --hcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhh-CCCcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 011234677889999999999999999874 4445554 48999999998 9999999999999999999963
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=251.26 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=173.4
Q ss_pred ccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 21 ~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
+.+|.+++|...|+++ +|||+||++++...|.++++.|.+ +||+|+++|+||||.|+
T Consensus 9 ~~~g~~l~y~~~g~~~-pvvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G~S~ 65 (279)
T 1hkh_A 9 NSTPIELYYEDQGSGQ-PVVLIHGYPLDGHSWERQTRELLA----------------------QGYRVITYDRRGFGGSS 65 (279)
T ss_dssp TTEEEEEEEEEESSSE-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTEEEEEECCTTSTTSC
T ss_pred CCCCeEEEEEecCCCC-cEEEEcCCCchhhHHhhhHHHHHh----------------------CCcEEEEeCCCCCCCCC
Confidence 5678999999999765 599999999999999999999987 58999999999999998
Q ss_pred CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCCCCCCCCcc----chhh
Q 018750 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKL----DLQT 175 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~----~~~~ 175 (351)
.+. ..++++++++|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++..+........ ....
T Consensus 66 ~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 1hkh_A 66 KVN--TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEV 143 (279)
T ss_dssp CCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHH
T ss_pred CCC--CCCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHH
Confidence 765 468999999999999999999999999999999999999999998 999999999854211100000 0000
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc-----CCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG-----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
.............. ........+.. ...........+........ .......+.. + .
T Consensus 144 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~----~ 205 (279)
T 1hkh_A 144 FDGIEAAAKGDRFA----------WFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSA---PVAAYAVVPA-W----I 205 (279)
T ss_dssp HHHHHHHHHHCHHH----------HHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSC---TTHHHHTHHH-H----T
T ss_pred HHHHHHHhhhhhhh----------hHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCc---HHHHHHHHHH-H----h
Confidence 00000000000000 00001111110 00011111111111111100 0000001111 1 1
Q ss_pred HHHHHHhhcc---CccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 251 QKDIQTIRSA---GFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 251 ~~~~~~l~~i---~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.+....+.++ ++|+|+|+|++|.++|++.+ +.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 206 ~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 206 EDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp CBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred hchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhC-CCeeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 1122345666 99999999999999998877 7888765 8999999998 9999999999999999999963
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=244.10 Aligned_cols=247 Identities=20% Similarity=0.287 Sum_probs=165.6
Q ss_pred EEEEEEcCC----CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 26 KIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 26 ~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
+++|...|+ +.|+|||+||++++...|..+++.|.+ .|+|+++|+||||.|+.
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G~G~S~~ 58 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVN-----------------------DHNIIQVDVRNHGLSPR 58 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTT-----------------------TSCEEEECCTTSTTSCC
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHh-----------------------hCcEEEecCCCCCCCCC
Confidence 468888884 456799999999999999999999987 69999999999999986
Q ss_pred CCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHh
Q 018750 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
+. .++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+..... +.. .........
T Consensus 59 ~~---~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~-~~~-~~~~~~~~~ 133 (255)
T 3bf7_A 59 EP---VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV-RRH-DEIFAAINA 133 (255)
T ss_dssp CS---CCCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCS-CCC-HHHHHHHHH
T ss_pred CC---CcCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCc-ccH-HHHHHHHHh
Confidence 53 5788999999999999999999999999999999999999999999999999864322110 000 000000000
Q ss_pred hcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcc-hhhhhhhcccCCHHHHHHhhcc
Q 018750 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD-GQIHACWMHKMTQKDIQTIRSA 260 (351)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i 260 (351)
.... . ..........+............+...+... .+... ..+...+..... ...+.++
T Consensus 134 ~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~l~~i 194 (255)
T 3bf7_A 134 VSES---------D---AQTRQQAAAIMRQHLNEEGVIQFLLKSFVDG----EWRFNVPVLWDQYPHIVG---WEKIPAW 194 (255)
T ss_dssp HHHS---------C---CCSHHHHHHHHTTTCCCHHHHHHHHTTEETT----EESSCHHHHHHTHHHHHC---CCCCCCC
T ss_pred cccc---------c---cccHHHHHHHHhhhcchhHHHHHHHHhccCC----ceeecHHHHHhhhhhccc---ccccccc
Confidence 0000 0 0000111111111000000000011100000 00000 000000000000 0124678
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
++|+|+|+|++|.+++++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 195 DHPALFIPGGNSPYVSEQYRDDLLAQF-PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp CSCEEEECBTTCSTTCGGGHHHHHHHC-TTEEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHC-CCCeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 999999999999999999999998875 8999999998 9999999999999999999975
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=248.36 Aligned_cols=262 Identities=23% Similarity=0.333 Sum_probs=173.7
Q ss_pred cccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHH-HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+++.+|.+++|...|+ +.|+|||+||++++...|.+. ++.|.+ +||+|+++|+||
T Consensus 4 ~~~~~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~w~~~~~~~L~~----------------------~G~~vi~~D~rG 61 (298)
T 1q0r_A 4 RIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLAD----------------------GGLHVIRYDHRD 61 (298)
T ss_dssp EEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHT----------------------TTCEEEEECCTT
T ss_pred ceeccCCeEEEEEeccCCCCCeEEEEcCCCCCccchHHHHHHHHHh----------------------CCCEEEeeCCCC
Confidence 45678999999999984 446799999999999999874 489987 589999999999
Q ss_pred CCCCCCCC-CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC--------
Q 018750 96 MGRSSVPV-KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ-------- 166 (351)
Q Consensus 96 ~G~S~~~~-~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~-------- 166 (351)
||.|+... ....++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++......
T Consensus 62 ~G~S~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 141 (298)
T 1q0r_A 62 TGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERV 141 (298)
T ss_dssp STTSCCCCTTTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCcCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhh
Confidence 99998621 124689999999999999999999999999999999999999999999999999998641100
Q ss_pred --------CCCccchhhhHHHHhhcc-cCCHHHHhhcCccccccHHHHH--Hhh-cC-CchhhhhHHHHHh-hhhhccCC
Q 018750 167 --------CCPKLDLQTLSIAIRFFR-AKTPEKRAAVDLDTHYSQEYLE--EYV-GS-STRRAILYQEYVK-GISATGMQ 232 (351)
Q Consensus 167 --------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~-~~~~~~~~~~~~~-~~~~~~~~ 232 (351)
..+......+........ ..... ........ ... .. ..........+.. .+.....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 211 (298)
T 1q0r_A 142 MRGEPTLDGLPGPQQPFLDALALMNQPAEGRA---------AEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGG- 211 (298)
T ss_dssp HHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHH---------HHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTT-
T ss_pred hhhhhhhcccccccHHHHHHHhccCcccccHH---------HHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCC-
Confidence 000000000000000000 00000 00000000 001 10 0011111111111 1111100
Q ss_pred CCCCc-chhhhhhhcccCCHHHHHH-hhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHH
Q 018750 233 SNYGF-DGQIHACWMHKMTQKDIQT-IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309 (351)
Q Consensus 233 ~~~~~-~~~~~~~~~~~~~~~~~~~-l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~ 309 (351)
...+ ...+. .....+.... ++++++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ || +.|++
T Consensus 212 -~~~~~~~~~~----~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH----e~p~~ 281 (298)
T 1q0r_A 212 -VLAEPYAHYS----LTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGH----ALPSS 281 (298)
T ss_dssp -CCSCCCGGGG----CCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCS----SCCGG
T ss_pred -ccchhhhhhh----hhcCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhC-CCCEEEEcCCCCC----CCcHH
Confidence 0011 11111 0011223345 7889999999999999999999999999876 8999999998 99 78899
Q ss_pred HHHHHHHHHHhc
Q 018750 310 VNQALIDLIKAS 321 (351)
Q Consensus 310 ~~~~i~~fl~~~ 321 (351)
+++.|.+||.+.
T Consensus 282 ~~~~i~~fl~~~ 293 (298)
T 1q0r_A 282 VHGPLAEVILAH 293 (298)
T ss_dssp GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=250.02 Aligned_cols=269 Identities=14% Similarity=0.163 Sum_probs=174.2
Q ss_pred ccccccCCeEEEEEEcCCCC-CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~-p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..+++.+|.+++|...|+++ |+|||+||++++...|..+++.|.+ +|+|+++|+||
T Consensus 23 ~~~~~~~g~~l~y~~~G~g~~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G 79 (318)
T 2psd_A 23 CKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEP-----------------------VARCIIPDLIG 79 (318)
T ss_dssp CEEEEETTEEEEEEECCSCTTSEEEEECCTTCCGGGGTTTGGGTTT-----------------------TSEEEEECCTT
T ss_pred ceEEeeCCeEEEEEEcCCCCCCeEEEECCCCCcHHHHHHHHHHhhh-----------------------cCeEEEEeCCC
Confidence 35688899999999999764 5799999999999999999999987 78999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
||.|+.+.. ..++++++++|+.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++..............
T Consensus 80 hG~S~~~~~-~~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~ 158 (318)
T 2psd_A 80 MGKSGKSGN-GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDI 158 (318)
T ss_dssp STTCCCCTT-SCCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSC
T ss_pred CCCCCCCCC-CccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhH
Confidence 999987632 458999999999999999998 899999999999999999999999999999998643211000100100
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhcc-----------CCCCCC-cchhhh
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG-----------MQSNYG-FDGQIH 242 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~ 242 (351)
. .....+........ ... ...+....+....... ........+...+.... ...... ......
T Consensus 159 ~--~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (318)
T 2psd_A 159 E--EDIALIKSEEGEKM-VLE-NNFFVETVLPSKIMRK-LEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVV 233 (318)
T ss_dssp H--HHHHHHHSTHHHHH-HTT-TCHHHHTHHHHTCSSC-CCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHH
T ss_pred H--HHHHHHhcccchhh-hhc-chHHHHhhcccccccc-CCHHHHHHHHHhhcCccccccchhcccccccccccccchhH
Confidence 0 01111100000000 000 0000000010000000 00111111111110000 000000 000000
Q ss_pred hhhcccCCHHHHHHhhcc-CccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 243 ACWMHKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
. ...+....+..+ ++|+|+|+|++| ++++ .++.+.+.+ ++.+++++++||++++|+|+++++.|.+||++.
T Consensus 234 ~-----~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 234 Q-----IVRNYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKF-PNTEFVKVKGLHFLQEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp H-----HHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTS-SSEEEEEEEESSSGGGTCHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhC-CCcEEEEecCCCCCHhhCHHHHHHHHHHHHHHh
Confidence 0 001223456778 999999999999 8888 788888865 888888885599999999999999999999865
Q ss_pred C
Q 018750 322 E 322 (351)
Q Consensus 322 ~ 322 (351)
.
T Consensus 306 ~ 306 (318)
T 2psd_A 306 L 306 (318)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=250.31 Aligned_cols=261 Identities=18% Similarity=0.247 Sum_probs=174.9
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
...+++.+|.+++|...|++ |+|||+||++ ++...|..+++.|.+ +|+|+++|
T Consensus 17 ~~~~~~~~g~~l~y~~~g~g-~~vvllHG~~~~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D 72 (296)
T 1j1i_A 17 VERFVNAGGVETRYLEAGKG-QPVILIHGGGAGAESEGNWRNVIPILAR-----------------------HYRVIAMD 72 (296)
T ss_dssp EEEEEEETTEEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHTT-----------------------TSEEEEEC
T ss_pred cceEEEECCEEEEEEecCCC-CeEEEECCCCCCcchHHHHHHHHHHHhh-----------------------cCEEEEEC
Confidence 35678889999999999976 4699999997 667789999999987 79999999
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
+||||.|+ +.. ..++++++++|+.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++........+.
T Consensus 73 l~G~G~S~-~~~-~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~- 149 (296)
T 1j1i_A 73 MLGFGKTA-KPD-IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED- 149 (296)
T ss_dssp CTTSTTSC-CCS-SCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----
T ss_pred CCCCCCCC-CCC-CCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCch-
Confidence 99999998 432 468999999999999999998 89999999999999999999999999999999986422111000
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
....... ...... ....+........ .................. ...+...+.........
T Consensus 150 ----~~~~~~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 211 (296)
T 1j1i_A 150 ----LRPIINY--DFTREG----------MVHLVKALTNDGFKIDDAMINSRYTYATDEAT--RKAYVATMQWIREQGGL 211 (296)
T ss_dssp ----------C--CSCHHH----------HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHH--HHHHHHHHHHHHHHTSS
T ss_pred ----HHHHhcc--cCCchH----------HHHHHHHhccCcccccHHHHHHHHHHhhCcch--hhHHHHHHHHHHhcccc
Confidence 0000000 000000 0001111110000 000000000000000000 00000000000000000
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
......+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||.+..
T Consensus 212 ~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 212 FYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp BCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred cccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHC-CCCEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 1123467889999999999999999999999999876 8999999998 999999999999999999998754
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-35 Score=252.95 Aligned_cols=278 Identities=16% Similarity=0.231 Sum_probs=178.3
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+..+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ .|+|+++|+||
T Consensus 11 ~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G 66 (301)
T 3kda_A 11 ESAYREVDGVKLHYVKGGQG-PLVMLVHGFGQTWYEWHQLMPELAK-----------------------RFTVIAPDLPG 66 (301)
T ss_dssp EEEEEEETTEEEEEEEEESS-SEEEEECCTTCCGGGGTTTHHHHTT-----------------------TSEEEEECCTT
T ss_pred ceEEEeeCCeEEEEEEcCCC-CEEEEECCCCcchhHHHHHHHHHHh-----------------------cCeEEEEcCCC
Confidence 46778899999999999955 5799999999999999999999998 59999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcc-eEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
||.|+.+. ..++++++++|+.++++.++.++ ++|+||||||.+++.+|.++|++|+++|++++...+..........
T Consensus 67 ~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 144 (301)
T 3kda_A 67 LGQSEPPK--TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFT 144 (301)
T ss_dssp STTCCCCS--SCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEE
T ss_pred CCCCCCCC--CCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhc
Confidence 99998774 57899999999999999999887 9999999999999999999999999999999875332111000000
Q ss_pred h----hHHHHhhccc-CCHHHHhhcCccccccHHHHHHhhcCC-chhhhhHHHHHhhhhhcc-CCCCCCcchhhhhhhcc
Q 018750 175 T----LSIAIRFFRA-KTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATG-MQSNYGFDGQIHACWMH 247 (351)
Q Consensus 175 ~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 247 (351)
. ......+... ..............+...++....... .........+...+.... ......+........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (301)
T 3kda_A 145 AQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESV-- 222 (301)
T ss_dssp TTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHH--
T ss_pred chhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccch--
Confidence 0 0000000000 000000000000000011111111110 001111111111111000 000000000000000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
.........++++++|+|+|+|++| +++...+.+.+.+ ++++++++++ ||++++++|+++++.|.+|+++..+.
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 223 RQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYA-EDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp HHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTB-SSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCCC
T ss_pred hhcccchhhccccCcceEEEecCCC--CChhHHHHHHhhc-ccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCchh
Confidence 0000011122388999999999999 6777888888765 8999999998 99999999999999999999987654
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=251.17 Aligned_cols=265 Identities=15% Similarity=0.155 Sum_probs=179.3
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..++++.+|.+++|...|+++ +|||+||++++...|..+.+.|.+ ||+|+++|+||
T Consensus 4 ~~~~~~~~~~~~~y~~~g~~~-~vv~~HG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~d~~G 59 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKGEGP-PLCVTHLYSEYNDNGNTFANPFTD-----------------------HYSVYLVNLKG 59 (278)
T ss_dssp EEEEEEETTEEEEEEEECSSS-EEEECCSSEECCTTCCTTTGGGGG-----------------------TSEEEEECCTT
T ss_pred ccCcEecCCceEEEEecCCCC-eEEEEcCCCcchHHHHHHHHHhhc-----------------------CceEEEEcCCC
Confidence 345788899999999999655 699999999999999999999987 99999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC-CCCC-----
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF-QCCP----- 169 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-~~~~----- 169 (351)
||.|+.+.....++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++..... ...+
T Consensus 60 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 139 (278)
T 3oos_A 60 CGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYC 139 (278)
T ss_dssp STTSCCCSSGGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTS
T ss_pred CCCCCCCCCcccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhh
Confidence 9999887644578899999999999999999999999999999999999999999999999999875310 0000
Q ss_pred --ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh-c
Q 018750 170 --KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-M 246 (351)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (351)
.............+..... .........................+ +... .. .......+.... .
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~~ 206 (278)
T 3oos_A 140 SKNVKFNRIVSIMNALNDDST--------VQEERKALSREWALMSFYSEEKLEEA---LKLP-NS-GKTVGNRLNYFRQV 206 (278)
T ss_dssp TTSTTHHHHHHHHHHHTCTTS--------CHHHHHHHHHHHHHHHCSCHHHHHHH---TTSC-CC-CEECHHHHHHHHHT
T ss_pred hhchhHHHHHHHHHhhccccc--------CchHHHHHHHHHhhcccCCcHHHHHH---hhcc-cc-chhHHHHHHHhhhc
Confidence 0000000000000000000 00000000000000000000000100 0000 00 000001111111 0
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
.....+....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.++|+++++.|.+||
T Consensus 207 ~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 207 EYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp TGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred ccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhC-CCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 11112334667889999999999999999999999999986 8999999998 99999999999999999985
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=249.83 Aligned_cols=252 Identities=17% Similarity=0.248 Sum_probs=168.3
Q ss_pred EEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC--C
Q 018750 28 FYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK--K 105 (351)
Q Consensus 28 ~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~--~ 105 (351)
+|...|+++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.. .
T Consensus 12 ~~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~~~~~ 68 (271)
T 1wom_A 12 HVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEE-----------------------DHRVILFDYVGSGHSDLRAYDLN 68 (271)
T ss_dssp TCEEEECCSSEEEEECCTTCCGGGGTTTGGGGTT-----------------------TSEEEECCCSCCSSSCCTTCCTT
T ss_pred eeEeecCCCCcEEEEcCCCCchhhHHHHHHHHHh-----------------------cCeEEEECCCCCCCCCCCccccc
Confidence 4556677778899999999999999999999987 89999999999999986531 1
Q ss_pred CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc----cchhhhHHHHh
Q 018750 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK----LDLQTLSIAIR 181 (351)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~ 181 (351)
..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+......+. ...........
T Consensus 69 ~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (271)
T 1wom_A 69 RYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLE 148 (271)
T ss_dssp GGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999986321100000 00000000000
Q ss_pred hcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccC
Q 018750 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (351)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (351)
....... .+...+........ ......+.+...+...... ......... ...+....+.+++
T Consensus 149 ~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~l~~i~ 210 (271)
T 1wom_A 149 MMEKNYI----------GWATVFAATVLNQP-DRPEIKEELESRFCSTDPV---IARQFAKAA----FFSDHREDLSKVT 210 (271)
T ss_dssp HHHHCHH----------HHHHHHHHHHHCCT-TCHHHHHHHHHHHHHSCHH---HHHHHHHHH----HSCCCHHHHTTCC
T ss_pred HHhhhHH----------HHHHHHHHHHhcCC-CchHHHHHHHHHHhcCCcH---HHHHHHHHH----hCcchHHhccccC
Confidence 0000000 00000000111110 0111111111111110000 000000000 0112235678899
Q ss_pred ccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 262 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+|+|+|+|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+||++.
T Consensus 211 ~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 211 VPSLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp SCEEEEEEETCSSSCHHHHHHHHHHS-SSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHC-CCCEEEEeCCCCcCccccCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998876 8899999998 99999999999999999999763
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=243.90 Aligned_cols=275 Identities=17% Similarity=0.190 Sum_probs=187.3
Q ss_pred CCccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 15 APDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
....+++.+|.+++|...|+ +.|+|||+||++++...|..+.+.|.+ ||+|+++|+
T Consensus 10 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~ 66 (299)
T 3g9x_A 10 FDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-----------------------SHRCIAPDL 66 (299)
T ss_dssp CCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCGGGGTTTHHHHTT-----------------------TSCEEEECC
T ss_pred cceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccHHHHHHHHHHHcc-----------------------CCEEEeeCC
Confidence 45678899999999999997 356799999999999999999999976 999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
||||.|+.+.. .++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++..... .......
T Consensus 67 ~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~ 143 (299)
T 3g9x_A 67 IGMGKSDKPDL--DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFP-TWDEWPE 143 (299)
T ss_dssp TTSTTSCCCCC--CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBS-SGGGSCG
T ss_pred CCCCCCCCCCC--cccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchh-hhhhcch
Confidence 99999987764 78999999999999999999999999999999999999999999999999999553221 1111111
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccC----------CCCCCcchhhhh
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM----------QSNYGFDGQIHA 243 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 243 (351)
........+........... ....+............ ........+...+..... ...........
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 219 (299)
T 3g9x_A 144 -FARETFQAFRTADVGRELII-DQNAFIEGALPKCVVRP-LTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIV- 219 (299)
T ss_dssp -GGHHHHHHHTSSSHHHHHHT-TSCHHHHTHHHHTCSSC-CCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHH-
T ss_pred -HHHHHHHHHcCCCcchhhhc-cchhhHHHhhhhhhccC-CCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhh-
Confidence 11111111111111110000 00001111111111111 111111111111100000 00000000000
Q ss_pred hhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
....+....+.++++|+++|+|++|.+++++.++.+.+.+ ++++++++++ ||++++++|+++++.|.+|+....
T Consensus 220 ----~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~ 294 (299)
T 3g9x_A 220 ----ALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALH 294 (299)
T ss_dssp ----HHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGC
T ss_pred ----hhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhC-CCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhh
Confidence 0112344567889999999999999999999999999986 8999999997 999999999999999999998776
Q ss_pred CC
Q 018750 323 KK 324 (351)
Q Consensus 323 ~~ 324 (351)
+.
T Consensus 295 ~~ 296 (299)
T 3g9x_A 295 HH 296 (299)
T ss_dssp CC
T ss_pred hc
Confidence 54
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=250.71 Aligned_cols=123 Identities=26% Similarity=0.452 Sum_probs=111.9
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
...+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ +||+|+++|+||
T Consensus 12 ~~~~~~~~g~~l~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~via~Dl~G 68 (328)
T 2cjp_A 12 EHKMVAVNGLNMHLAELGEG-PTILFIHGFPELWYSWRHQMVYLAE----------------------RGYRAVAPDLRG 68 (328)
T ss_dssp EEEEEEETTEEEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHT----------------------TTCEEEEECCTT
T ss_pred heeEecCCCcEEEEEEcCCC-CEEEEECCCCCchHHHHHHHHHHHH----------------------CCcEEEEECCCC
Confidence 44577889999999999965 5799999999999999999999986 589999999999
Q ss_pred CCCCCCC--CCCCccchHhHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 96 MGRSSVP--VKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 96 ~G~S~~~--~~~~~~~~~~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
||.|+.+ .....++++++++|+.++++.++ .++++|+||||||.+|+.+|.++|++|+++|+++++
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 69 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp STTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCcCcCCcccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 9999876 33346899999999999999999 899999999999999999999999999999999865
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=243.04 Aligned_cols=266 Identities=19% Similarity=0.242 Sum_probs=170.4
Q ss_pred CccccccCCeEEEEEEcCCC--CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 16 PDAALNDNGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~--~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
...+++.+|.+++|...|++ +++|||+||++++...|...+..+.+ +||+|+++|+
T Consensus 6 ~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~ 63 (293)
T 1mtz_A 6 IENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK----------------------EGITVLFYDQ 63 (293)
T ss_dssp EEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGG----------------------GTEEEEEECC
T ss_pred cceEEEECCEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHHHHHHh----------------------cCcEEEEecC
Confidence 35578889999999999975 26899999987666555444444554 5899999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||||.|+.+. ...++++++++|+.++++.+ +.++++|+||||||.+|+.+|.++|++|+++|++++.. ...
T Consensus 64 ~G~G~S~~~~-~~~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~-------~~~ 135 (293)
T 1mtz_A 64 FGCGRSEEPD-QSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLS-------SVP 135 (293)
T ss_dssp TTSTTSCCCC-GGGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCS-------BHH
T ss_pred CCCccCCCCC-CCcccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCcc-------ChH
Confidence 9999998765 23579999999999999999 99999999999999999999999999999999999763 111
Q ss_pred hhhhHHHHhhcccCCHHHHhh--------cCccccc---cHHHHHHhhcC-CchhhhhHHHHH---h--hhhhccCCCCC
Q 018750 173 LQTLSIAIRFFRAKTPEKRAA--------VDLDTHY---SQEYLEEYVGS-STRRAILYQEYV---K--GISATGMQSNY 235 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~ 235 (351)
.. .................. ......+ ...+....... ..........+. . .+........+
T Consensus 136 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (293)
T 1mtz_A 136 LT-VKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEF 214 (293)
T ss_dssp HH-HHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTT
T ss_pred HH-HHHHHHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCccee
Confidence 00 000000000000000000 0000000 00011111100 000011101000 0 00000000000
Q ss_pred CcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHH
Q 018750 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i 314 (351)
.....+ ...+..+.+.++++|+|+|+|++| .+++..++.+.+.+ ++++++++++ ||+++.|+|+++++.|
T Consensus 215 ~~~~~~-------~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i 285 (293)
T 1mtz_A 215 TITGTI-------KDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLL 285 (293)
T ss_dssp BCCSTT-------TTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred cccccc-------cCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhC-CCceEEEeCCCCCCccccCHHHHHHHH
Confidence 000000 011123456789999999999999 67788888888876 8999999998 9999999999999999
Q ss_pred HHHHHhc
Q 018750 315 IDLIKAS 321 (351)
Q Consensus 315 ~~fl~~~ 321 (351)
.+||++.
T Consensus 286 ~~fl~~~ 292 (293)
T 1mtz_A 286 SDFILKH 292 (293)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9999753
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=250.72 Aligned_cols=274 Identities=20% Similarity=0.266 Sum_probs=173.5
Q ss_pred CCCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 14 AAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 14 ~~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.....+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ ||+|+++|+
T Consensus 12 ~~~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~D~ 67 (306)
T 3r40_A 12 GFGSEWINTSSGRIFARVGGDG-PPLLLLHGFPQTHVMWHRVAPKLAE-----------------------RFKVIVADL 67 (306)
T ss_dssp TCEEEEECCTTCCEEEEEEECS-SEEEEECCTTCCGGGGGGTHHHHHT-----------------------TSEEEEECC
T ss_pred CCceEEEEeCCEEEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHhcc-----------------------CCeEEEeCC
Confidence 3456788889999999999965 5799999999999999999999997 999999999
Q ss_pred CCCCCCCCCCCC---CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 94 RGMGRSSVPVKK---TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 94 ~G~G~S~~~~~~---~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
||||.|+.+... ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+ .
T Consensus 68 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~-------~ 140 (306)
T 3r40_A 68 PGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILP-------T 140 (306)
T ss_dssp TTSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC-------H
T ss_pred CCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCC-------C
Confidence 999999877642 268999999999999999999999999999999999999999999999999999752 1
Q ss_pred cchhh-hH-HHH------hhcccCC-HHHHhhcCccccccHHHHHHhhcC---CchhhhhHHHHHhhhhhccCCCCCCcc
Q 018750 171 LDLQT-LS-IAI------RFFRAKT-PEKRAAVDLDTHYSQEYLEEYVGS---STRRAILYQEYVKGISATGMQSNYGFD 238 (351)
Q Consensus 171 ~~~~~-~~-~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
..... .. ... ....... ............+....+...... ........+.+...+..... .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 218 (306)
T 3r40_A 141 YEYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMR--RHVMC 218 (306)
T ss_dssp HHHHHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHH--HHHHH
T ss_pred ccchhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCC--cchhh
Confidence 11000 00 000 0000000 000000000001111111111111 11111112222211110000 00000
Q ss_pred hhhhhhhcccC--CHHHHHHhhccCccEEEEeecCCccCCH-HHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHH
Q 018750 239 GQIHACWMHKM--TQKDIQTIRSAGFLVSVIHGRHDVIAQI-CYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALI 315 (351)
Q Consensus 239 ~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~ 315 (351)
........... .......+.++++|+|+|+|++|.+++. ...+.+.+ +.++.+++++++||+++.++|+++++.|.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 297 (306)
T 3r40_A 219 EDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRK-WASDVQGAPIESGHFLPEEAPDQTAEALV 297 (306)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHH-HBSSEEEEEESSCSCHHHHSHHHHHHHHH
T ss_pred HHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHh-hcCCCeEEEecCCcCchhhChHHHHHHHH
Confidence 00000000000 0011125688999999999999999994 44444444 55899998886699999999999999999
Q ss_pred HHHHhc
Q 018750 316 DLIKAS 321 (351)
Q Consensus 316 ~fl~~~ 321 (351)
+||++.
T Consensus 298 ~fl~~~ 303 (306)
T 3r40_A 298 RFFSAA 303 (306)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 999875
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=240.08 Aligned_cols=255 Identities=15% Similarity=0.141 Sum_probs=174.3
Q ss_pred ccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
+++++|.+++|...|+ +.|+|||+||++++...|..+++.|.+ +|+|+++|+||||
T Consensus 3 ~~~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~D~~G~G 59 (264)
T 3ibt_A 3 SLNVNGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLAR-----------------------DFHVICPDWRGHD 59 (264)
T ss_dssp CCEETTEECCEEEESCSSSCEEEEECCTTCCGGGGTTHHHHHTT-----------------------TSEEEEECCTTCS
T ss_pred eEeeCCeEEEEEEeCCCCCCeEEEEcCCCCcHhHHHHHHHHHHh-----------------------cCcEEEEccccCC
Confidence 4566799999999997 567899999999999999999999987 7999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEeccCCCCCCCCCccchhhh
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKLDLQTL 176 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (351)
.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.+|.++ |++|+++|++++.. .......
T Consensus 60 ~S~~~~--~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-------~~~~~~~ 130 (264)
T 3ibt_A 60 AKQTDS--GDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-------QPHPGFW 130 (264)
T ss_dssp TTCCCC--SCCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-------SCCHHHH
T ss_pred CCCCCc--cccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-------CcChhhc
Confidence 999774 5789999999999999999999999999999999999999999 99999999999874 0111111
Q ss_pred HHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc-CCHHHHH
Q 018750 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK-MTQKDIQ 255 (351)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 255 (351)
.............. ........++... ......+.+.+.+..... ..+........... .......
T Consensus 131 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 197 (264)
T 3ibt_A 131 QQLAEGQHPTEYVA---------GRQSFFDEWAETT-DNADVLNHLRNEMPWFHG---EMWQRACREIEANYRTWGSPLD 197 (264)
T ss_dssp HHHHHTTCTTTHHH---------HHHHHHHHHHTTC-CCHHHHHHHHHTGGGSCH---HHHHHHHHHHHHHHHHHSSHHH
T ss_pred chhhcccChhhHHH---------HHHHHHHHhcccC-CcHHHHHHHHHhhhhccc---hhHHHHHHHhccchhhccchhh
Confidence 11111111000000 0011111221111 111111222221111100 00000000000000 0001236
Q ss_pred HhhccCccEEEEee--cCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 256 TIRSAGFLVSVIHG--RHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 256 ~l~~i~~Pvlii~g--~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
.+.++++|+++|+| +.|...+++..+.+.+.+ ++++++++++ ||+++.++|+++++.|.+||+
T Consensus 198 ~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 198 RMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGH-SWFHPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHC-TTEEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred cccccCCCeEEEEecCCccchhhHHHHHHHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 77899999999976 445555577778888865 8999999998 999999999999999999986
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-33 Score=237.58 Aligned_cols=273 Identities=18% Similarity=0.238 Sum_probs=183.5
Q ss_pred CccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
...+++.+|.+++|...|+ +.|+|||+||++++...|..+++.|.+ +||+|+++|+|
T Consensus 5 ~~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~ 62 (286)
T 3qit_A 5 EEKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAA----------------------QGYRVVAPDLF 62 (286)
T ss_dssp EEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCT
T ss_pred hhheeecCCceEEEeecCCCCCCEEEEECCCCcccchHHHHHHHhhh----------------------cCeEEEEECCC
Confidence 4567889999999999996 457899999999999999999999998 68999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|+|.|........++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++..............
T Consensus 63 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 142 (286)
T 3qit_A 63 GHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVN 142 (286)
T ss_dssp TSTTSCCCSSGGGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHH
T ss_pred CCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhH
Confidence 99999877644578999999999999999999999999999999999999999999999999999875433222111111
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhcc-CCCCCCcchhhhhh-hccc----
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG-MQSNYGFDGQIHAC-WMHK---- 248 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~---- 248 (351)
.+.............. ................ ..........+........ ......+....... ....
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (286)
T 3qit_A 143 QLTTCLDYLSSTPQHP---IFPDVATAASRLRQAI--PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLP 217 (286)
T ss_dssp HHHHHHHHHTCCCCCC---CBSSHHHHHHHHHHHS--TTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCT
T ss_pred HHHHHHHHHhcccccc---ccccHHHHHHHhhcCC--cccCHHHHHHHhhccccccccceeeeechhhhccccccccccc
Confidence 1111111111110000 0000000000111111 1111111111111111100 00000000000000 0000
Q ss_pred -CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHH
Q 018750 249 -MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALID 316 (351)
Q Consensus 249 -~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~ 316 (351)
...+....+.++++|+++|+|++|.++|++..+.+.+.+ ++++++++++||++++++|+++++.|.+
T Consensus 218 ~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ggH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 218 GGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM-TQAKRVFLSGGHNLHIDAAAALASLILT 285 (286)
T ss_dssp THHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHS-TTSEEEEESSSSCHHHHTHHHHHHHHHC
T ss_pred cchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHC-CCCeEEEeeCCchHhhhChHHHHHHhhc
Confidence 123445677889999999999999999999999999976 8899999999999999999999998864
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=236.02 Aligned_cols=255 Identities=20% Similarity=0.228 Sum_probs=175.1
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
..+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ ||+|+++|+|||
T Consensus 5 ~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~d~~G~ 60 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSGSG-PPVVLVGGALSTRAGGAPLAERLAP-----------------------HFTVICYDRRGR 60 (262)
T ss_dssp CEEECTTSCEEEEEEEECS-SEEEEECCTTCCGGGGHHHHHHHTT-----------------------TSEEEEECCTTS
T ss_pred heEEcCCCcEEEEEEcCCC-CcEEEECCCCcChHHHHHHHHHHhc-----------------------CcEEEEEecCCC
Confidence 3567789999999999975 4699999999999999999999986 999999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhh
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (351)
|.|+... .++++++++|+.++++.++ ++++++||||||.+++.+|.++| +|+++|++++................
T Consensus 61 G~S~~~~---~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~ 135 (262)
T 3r0v_A 61 GDSGDTP---PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQ 135 (262)
T ss_dssp TTCCCCS---SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHH
T ss_pred cCCCCCC---CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHH
Confidence 9998764 6789999999999999999 99999999999999999999999 99999999987543322222112222
Q ss_pred HHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhh-hhhcccCCHHHHH
Q 018750 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH-ACWMHKMTQKDIQ 255 (351)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 255 (351)
......+......... ..+..... .......+.+.......... ....... .............
T Consensus 136 ~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 200 (262)
T 3r0v_A 136 TRLDALLAEGRRGDAV---------TYFMTEGV---GVPPDLVAQMQQAPMWPGME---AVAHTLPYDHAVMGDNTIPTA 200 (262)
T ss_dssp HHHHHHHHTTCHHHHH---------HHHHHHTS---CCCHHHHHHHHTSTTHHHHH---HTGGGHHHHHHHHTTSCCCHH
T ss_pred HHHHHHhhccchhhHH---------HHHhhccc---CCCHHHHHHHHhhhcccchH---HHHhhhhhhhhhhhcCCCCHH
Confidence 2222211111111000 00111100 00111111111000000000 0000000 0000000112246
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
.+.++++|+|+|+|++|.++|++..+++.+.+ ++++++++++ || +++|+++++.|.+||+
T Consensus 201 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH---~~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 201 RFASISIPTLVMDGGASPAWIRHTAQELADTI-PNARYVTLENQTH---TVAPDAIAPVLVEFFT 261 (262)
T ss_dssp HHTTCCSCEEEEECTTCCHHHHHHHHHHHHHS-TTEEEEECCCSSS---SCCHHHHHHHHHHHHC
T ss_pred HcCcCCCCEEEEeecCCCCCCHHHHHHHHHhC-CCCeEEEecCCCc---ccCHHHHHHHHHHHHh
Confidence 77889999999999999999999999999986 8999999998 99 4799999999999996
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=247.23 Aligned_cols=273 Identities=25% Similarity=0.337 Sum_probs=171.5
Q ss_pred CCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+.++++++|.+++|...|+++ +|||+||++++...|..+.+.|.+ +|+|+++|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~g~-~~vllHG~~~~~~~w~~~~~~l~~-----------------------~~~vi~~Dl~ 60 (291)
T 3qyj_A 5 FEQTIVDTTEARINLVKAGHGA-PLLLLHGYPQTHVMWHKIAPLLAN-----------------------NFTVVATDLR 60 (291)
T ss_dssp CEEEEEECSSCEEEEEEECCSS-EEEEECCTTCCGGGGTTTHHHHTT-----------------------TSEEEEECCT
T ss_pred cceeEEecCCeEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEcCC
Confidence 3456788999999999999776 599999999999999999999987 9999999999
Q ss_pred CCCCCCCCCCC---CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 95 GMGRSSVPVKK---TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 95 G~G~S~~~~~~---~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
|||.|+.+... ..++.+.+++|+.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.+... .....
T Consensus 61 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~-~~~~~ 139 (291)
T 3qyj_A 61 GYGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHK-MYRTT 139 (291)
T ss_dssp TSTTSCCCCCCGGGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHH-HHHTC
T ss_pred CCCCCCCCCCCccccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcch-hhhcc
Confidence 99999876542 247899999999999999999999999999999999999999999999999998652100 00000
Q ss_pred chhhhHHHHhh--cccCC--HHHHhhcCccccccHHHHHHhhcC-CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 172 DLQTLSIAIRF--FRAKT--PEKRAAVDLDTHYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 172 ~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
..........+ ..... +..... .....+....+...... ..........+.+.+.... .. ......+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~ 212 (291)
T 3qyj_A 140 DQEFATAYYHWFFLIQPDNLPETLIG-ANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPA-----VI-HATCEDYR 212 (291)
T ss_dssp CHHHHHHTTHHHHTTCSTTHHHHHHH-TCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHH-----HH-HHHHHHHH
T ss_pred hhhhhHHHHHHHHhccCCCchHHHHc-CCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCC-----cc-hhHHHHHH
Confidence 00000000000 00000 000000 00000011111111110 0011111222221111000 00 00000000
Q ss_pred ccCC----HHHHHHhhccCccEEEEeecCCccCCH-HHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 247 HKMT----QKDIQTIRSAGFLVSVIHGRHDVIAQI-CYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 247 ~~~~----~~~~~~l~~i~~Pvlii~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.... .+....+.++++|+|+|+|++|.+.+. .....+.+. .++.+..++++||+++.|+|+++++.|.+||..
T Consensus 213 ~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 213 AAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRER-AIDVSGQSLPCGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTT-BSSEEEEEESSSSCHHHHSHHHHHHHHHHHHHC
T ss_pred cccccchhhcchhcCCccccceEEEecccccccchhhHHHHHHhh-cCCcceeeccCCCCchhhCHHHHHHHHHHHHhc
Confidence 0001 111123578999999999999976542 233444443 478888888889999999999999999999975
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=244.02 Aligned_cols=261 Identities=26% Similarity=0.353 Sum_probs=178.7
Q ss_pred ccccCCeEEEEEEcCCCCCeEEEEecCCCCccchH-HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 19 ALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
..+.+|.+++|...|++ |+|||+||++++...|. .++..|.+ +||+|+++|+||+|
T Consensus 27 ~~~~~~~~l~y~~~g~~-~~vv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G 83 (293)
T 3hss_A 27 DPEFRVINLAYDDNGTG-DPVVFIAGRGGAGRTWHPHQVPAFLA----------------------AGYRCITFDNRGIG 83 (293)
T ss_dssp CTTSCEEEEEEEEECSS-EEEEEECCTTCCGGGGTTTTHHHHHH----------------------TTEEEEEECCTTSG
T ss_pred ccccccceEEEEEcCCC-CEEEEECCCCCchhhcchhhhhhHhh----------------------cCCeEEEEccCCCC
Confidence 35678999999999965 46999999999999998 67888865 59999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhH
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (351)
.|..+. .++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++..... ........
T Consensus 84 ~s~~~~---~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~ 156 (293)
T 3hss_A 84 ATENAE---GFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLD----RARQFFNK 156 (293)
T ss_dssp GGTTCC---SCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC----HHHHHHHH
T ss_pred CCCCcc---cCCHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCC----hhhhHHHH
Confidence 997654 57999999999999999999999999999999999999999999999999999863210 00000000
Q ss_pred HH---HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 178 IA---IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 178 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
.. .............. ......+.............+........... ..............+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 224 (293)
T 3hss_A 157 AEAELYDSGVQLPPTYDAR--------ARLLENFSRKTLNDDVAVGDWIAMFSMWPIKS----TPGLRCQLDCAPQTNRL 224 (293)
T ss_dssp HHHHHHHHTCCCCHHHHHH--------HHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCC----CHHHHHHHTSSCSSCCH
T ss_pred HHHHHHhhcccchhhHHHH--------HHHhhhcccccccccccHHHHHHHHhhccccc----cHHHHhHhhhccccchH
Confidence 00 00000000000000 00000000000001111111111111111100 01111111112223445
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
..+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.++|+++.+.|.+||++..
T Consensus 225 ~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 225 PAYRNIAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASVK 292 (293)
T ss_dssp HHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTCC
T ss_pred HHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHC-CCceEEEeCCCcchHhhhCHHHHHHHHHHHHHhcC
Confidence 677889999999999999999999999999986 8999999998 999999999999999999998753
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=239.54 Aligned_cols=264 Identities=19% Similarity=0.210 Sum_probs=181.8
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
....++.+|.+++|...|+ .|+||++||++++...|..+++.|++ +|+|+++|+||
T Consensus 49 ~~~~~~~~~~~~~~~~~g~-~p~vv~lhG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~D~~G 104 (314)
T 3kxp_A 49 ISRRVDIGRITLNVREKGS-GPLMLFFHGITSNSAVFEPLMIRLSD-----------------------RFTTIAVDQRG 104 (314)
T ss_dssp EEEEEECSSCEEEEEEECC-SSEEEEECCTTCCGGGGHHHHHTTTT-----------------------TSEEEEECCTT
T ss_pred ceeeEEECCEEEEEEecCC-CCEEEEECCCCCCHHHHHHHHHHHHc-----------------------CCeEEEEeCCC
Confidence 4567788999999999988 56799999999999999999999987 79999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
+|.|..+. ..++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.. ......
T Consensus 105 ~G~S~~~~--~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~-------~~~~~~ 175 (314)
T 3kxp_A 105 HGLSDKPE--TGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTP-------YIETEA 175 (314)
T ss_dssp STTSCCCS--SCCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT-------TCCHHH
T ss_pred cCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCC-------CCCcch
Confidence 99998444 578999999999999999999999999999999999999999999999999999863 222222
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhh-hhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKG-ISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
.............. ..........+....... ........... +.........................+..
T Consensus 176 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
T 3kxp_A 176 LDALEARVNAGSQL-----FEDIKAVEAYLAGRYPNI--PADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLV 248 (314)
T ss_dssp HHHHHHHTTTTCSC-----BSSHHHHHHHHHHHSTTS--CHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCH
T ss_pred hhHHHHHhhhchhh-----hcCHHHHHHHHHhhcccC--chHHHHHHhhhhhcccccccccccChhhhhhhccccCcchh
Confidence 11111111110000 000000011111111111 11111111111 11000000000000011111111111345
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..+.++++|+|+|+|++|.+++++..+.+.+.+ ++++++++++ ||+++.++|+++.+.|.+||++
T Consensus 249 ~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 249 PAYRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred hHhhcCCCCEEEEecCCCccCCHHHHHHHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 667889999999999999999999999999986 8899999998 9999999999999999999974
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=244.91 Aligned_cols=263 Identities=16% Similarity=0.160 Sum_probs=176.6
Q ss_pred cccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
.....++.+++|...|+++|+|||+||++++...|..++..| ||+|+++|+||+|
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~~vv~~hG~~~~~~~~~~~~~~l-------------------------g~~Vi~~D~~G~G 117 (330)
T 3p2m_A 63 EVERVQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGL-------------------------GEPALAVDLPGHG 117 (330)
T ss_dssp CEEEEEETTEEEEEESSSCCSEEEECCTTCCGGGGHHHHHHS-------------------------CCCEEEECCTTST
T ss_pred CceeecCceEEEEEeCCCCCeEEEECCCCCccchHHHHHHHc-------------------------CCeEEEEcCCCCC
Confidence 345567778999999988888999999999999999888766 5899999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhH
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (351)
.|+.... ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.. .... ...
T Consensus 118 ~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~-------~~~~-~~~ 188 (330)
T 3p2m_A 118 HSAWRED-GNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTP-------SALQ-RHA 188 (330)
T ss_dssp TSCCCSS-CBCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCH-------HHHH-HHH
T ss_pred CCCCCCC-CCCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCC-------ccch-hhh
Confidence 9986554 578999999999999999999999999999999999999999999999999999752 1110 000
Q ss_pred HHHhhcccCCHHHHhhcCccccccHHHHHHhh--cCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYV--GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
........... ..... .........+.... ............+......... . .+..............+...
T Consensus 189 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3p2m_A 189 ELTAEQRGTVA-LMHGE-REFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDN-G--NWVWRYDAIRTFGDFAGLWD 263 (330)
T ss_dssp HHTCC-------------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSS-S--CEEESSCCCSBCCCHHHHHH
T ss_pred hhhhhhhhhhh-hhcCC-ccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCC-C--ceEEeechhhCccccHHHHH
Confidence 00000000000 00000 00000111111111 0111111111111111111000 0 00000000001111123346
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCce-EEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR-MIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.+.++++|+|+|+|++|.++|++.++++.+.+ ++++ ++++++ ||+++.++|+++++.|.+||++
T Consensus 264 ~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 264 DVDALSAPITLVRGGSSGFVTDQDTAELHRRA-THFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHCCSCEEEEEETTCCSSCHHHHHHHHHHC-SSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred HHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 78899999999999999999999999999986 8888 999998 9999999999999999999964
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=236.24 Aligned_cols=274 Identities=15% Similarity=0.143 Sum_probs=181.1
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+..+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ +|+|+++|+||
T Consensus 9 ~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G 64 (297)
T 2qvb_A 9 QPKYLEIAGKRMAYIDEGKG-DAIVFQHGNPTSSYLWRNIMPHLEG-----------------------LGRLVACDLIG 64 (297)
T ss_dssp CCEEEEETTEEEEEEEESSS-SEEEEECCTTCCGGGGTTTGGGGTT-----------------------SSEEEEECCTT
T ss_pred CceEEEECCEEEEEEecCCC-CeEEEECCCCchHHHHHHHHHHHhh-----------------------cCeEEEEcCCC
Confidence 45678889999999999985 5799999999999999999999987 79999999999
Q ss_pred CCCCCCCCC--CCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 96 MGRSSVPVK--KTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 96 ~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||.|+.+.. ...++++++++|+.++++.++. ++++++||||||.+++.+|.++|++|+++|++++....... ....
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~ 143 (297)
T 2qvb_A 65 MGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTW-ADWP 143 (297)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCG-GGSC
T ss_pred CCCCCCCCCccccCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccC-CCCC
Confidence 999986642 1228999999999999999999 99999999999999999999999999999999987532110 0111
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh-------
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW------- 245 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 245 (351)
. ........+.......... . ...+....+...... .........+...+.... ..............
T Consensus 144 ~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2qvb_A 144 P-AVRGVFQGFRSPQGEPMAL-E-HNIFVERVLPGAILR-QLSDEEMNHYRRPFVNGG-EDRRPTLSWPRNLPIDGEPAE 218 (297)
T ss_dssp G-GGHHHHHHHTSTTHHHHHH-T-TCHHHHTHHHHTCSS-CCCHHHHHHHHGGGCSSS-GGGHHHHHHHHHSCBTTBSHH
T ss_pred h-HHHHHHHHHhcccchhhhc-c-ccHHHHHHHhccccc-cCCHHHHHHHHHHhcCcc-cchhhHHHHHHhccccCCchh
Confidence 1 1111111111111100000 0 000000111110000 111111111111110000 00000000000000
Q ss_pred cccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
......+....+.++++|+|+|+|++|.+++++..+.+.+.+ ++ +++++ + ||+++.++|+++.+.|.+||++..
T Consensus 219 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 219 VVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWP-NQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHc-CC-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHh
Confidence 000112345677889999999999999999999999999876 77 99888 7 999999999999999999998753
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=240.69 Aligned_cols=263 Identities=16% Similarity=0.168 Sum_probs=176.7
Q ss_pred ccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC
Q 018750 19 ALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~ 98 (351)
+++++|.+++|...|+++ +|||+||++++...|..++..|.+. +||+|+++|+||||.
T Consensus 5 ~~~~~g~~l~y~~~g~~~-~vv~lhG~~~~~~~~~~~~~~l~~~---------------------~g~~v~~~d~~G~G~ 62 (272)
T 3fsg_A 5 KEYLTRSNISYFSIGSGT-PIIFLHGLSLDKQSTCLFFEPLSNV---------------------GQYQRIYLDLPGMGN 62 (272)
T ss_dssp CCEECTTCCEEEEECCSS-EEEEECCTTCCHHHHHHHHTTSTTS---------------------TTSEEEEECCTTSTT
T ss_pred EEEecCCeEEEEEcCCCC-eEEEEeCCCCcHHHHHHHHHHHhcc---------------------CceEEEEecCCCCCC
Confidence 577899999999999654 6999999999999999998887641 399999999999999
Q ss_pred CCCCCCCCccchHhHHHHHHHHHHH-hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhH
Q 018750 99 SSVPVKKTEYTTKIMAKDVIALMDH-LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (351)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (351)
|+.+.. ++++++++|+.++++. ++.++++|+||||||.+|+.+|.++|++|+++|++++.................
T Consensus 63 s~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 139 (272)
T 3fsg_A 63 SDPISP---STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINI 139 (272)
T ss_dssp CCCCSS---CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCE
T ss_pred CCCCCC---CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhh
Confidence 987763 8999999999999999 788999999999999999999999999999999999874221110000000000
Q ss_pred HHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh
Q 018750 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (351)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (351)
....+....... ....+....... .......+..............+...+... .....+....+
T Consensus 140 ~~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 204 (272)
T 3fsg_A 140 LEEDINPVENKE----------YFADFLSMNVII---NNQAWHDYQNLIIPGLQKEDKTFIDQLQNN--YSFTFEEKLKN 204 (272)
T ss_dssp ECSCCCCCTTGG----------GHHHHHHHCSEE---SHHHHHHHHHHTHHHHHHCCHHHHHHHTTS--CSCTTHHHHTT
T ss_pred hhhhhhcccCHH----------HHHHHHHHhccC---CCchhHHHHHHhhhhhhhccHHHHHHHhhh--cCCChhhhhhh
Confidence 000000000000 000011110000 000000011100000000000000000000 00122222345
Q ss_pred hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
.++++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ ||+++.++|+++.+.|.+||++..
T Consensus 205 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 205 INYQFPFKIMVGRNDQVVGYQEQLKLINHN-ENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp CCCSSCEEEEEETTCTTTCSHHHHHHHTTC-TTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhh
Confidence 788999999999999999999999999876 8999999998 999999999999999999998764
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=242.51 Aligned_cols=247 Identities=18% Similarity=0.189 Sum_probs=159.5
Q ss_pred EEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 018750 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (351)
Q Consensus 26 ~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 105 (351)
+++|...|+++++|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+
T Consensus 3 ~l~~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~--- 56 (258)
T 1m33_A 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGF--- 56 (258)
T ss_dssp CCCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHT-----------------------TSEEEEECCTTSTTCCSC---
T ss_pred ceEEEEecCCCCeEEEECCCCCChHHHHHHHHHhhc-----------------------CcEEEEeeCCCCCCCCCC---
Confidence 578999998753799999999999999999999987 899999999999999876
Q ss_pred CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC--CccchhhhHHHHhhc
Q 018750 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC--PKLDLQTLSIAIRFF 183 (351)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~ 183 (351)
..++++++++++.+. ++ ++++|+||||||.+|+.+|.++|++|+++|++++.+...... +.............+
T Consensus 57 ~~~~~~~~~~~l~~~---l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (258)
T 1m33_A 57 GALSLADMAEAVLQQ---AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 132 (258)
T ss_dssp CCCCHHHHHHHHHTT---SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH---hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHH
Confidence 257888888776544 44 789999999999999999999999999999998763211100 000000000000000
Q ss_pred ccCCHHHHhhcCccccccHHHHHHhhc----CCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 184 RAKTPEKRAAVDLDTHYSQEYLEEYVG----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
. .. .......+.. .........+.+...+..........+......... .+....+.+
T Consensus 133 ~---~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 194 (258)
T 1m33_A 133 S---DD-----------QQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKT----VDLRQPLQN 194 (258)
T ss_dssp H---HH-----------HHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH----CCCTTGGGG
T ss_pred h---cc-----------HHHHHHHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHh----CCHHHHHhh
Confidence 0 00 0000111110 000001111111111110000000000000000000 011235678
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+++|+++|+|++|.+++++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+||.+.
T Consensus 195 i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp CCSCEEEEEETTCSSSCGGGCC-CTTTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeecCCCCCCHHHHHHHHHhC-ccceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 8999999999999999998888887765 8899999998 99999999999999999999754
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=237.52 Aligned_cols=274 Identities=14% Similarity=0.133 Sum_probs=181.3
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
..+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ +|+|+++|+|||
T Consensus 11 ~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G~ 66 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEGTG-DPILFQHGNPTSSYLWRNIMPHCAG-----------------------LGRLIACDLIGM 66 (302)
T ss_dssp CEEEEETTEEEEEEEESCS-SEEEEECCTTCCGGGGTTTGGGGTT-----------------------SSEEEEECCTTS
T ss_pred ceEEEECCEEEEEEEcCCC-CEEEEECCCCCchhhhHHHHHHhcc-----------------------CCeEEEEcCCCC
Confidence 4678889999999999975 5799999999999999999999987 689999999999
Q ss_pred CCCCCCCC--CCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 97 GRSSVPVK--KTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 97 G~S~~~~~--~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
|.|+.+.. ...++++++++|+.++++.++. ++++++||||||.+++.+|.++|++|+++|++++...... ......
T Consensus 67 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~ 145 (302)
T 1mj5_A 67 GDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIE-WADFPE 145 (302)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBC-GGGSCG
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchh-hhhhhH
Confidence 99987642 1238999999999999999998 9999999999999999999999999999999998753210 001111
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh-------c
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-------M 246 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 246 (351)
. .......+........ . .....+....+...... .........+...+.... .....+........ .
T Consensus 146 ~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 220 (302)
T 1mj5_A 146 Q-DRDLFQAFRSQAGEEL-V-LQDNVFVEQVLPGLILR-PLSEAEMAAYREPFLAAG-EARRPTLSWPRQIPIAGTPADV 220 (302)
T ss_dssp G-GHHHHHHHHSTTHHHH-H-TTTCHHHHTHHHHTSSS-CCCHHHHHHHHGGGCSSS-GGGHHHHHTGGGSCBTTBSHHH
T ss_pred H-HHHHHHHHhccchhhh-h-cChHHHHHHHHHhcCcc-cCCHHHHHHHHHHhhccc-ccccchHHHHHhccccccchhh
Confidence 1 1111111111110000 0 00000111111110001 111111111111110000 00000000000000 0
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
.....+....+.++++|+|+|+|++|.++|++..+.+.+.+ ++ +++++ + ||+++.++|+++++.|.+|+++...
T Consensus 221 ~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 295 (302)
T 1mj5_A 221 VAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWP-NQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRP 295 (302)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhc-CC-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhcc
Confidence 00112345677889999999999999999999999998876 77 99888 7 9999999999999999999987654
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=240.08 Aligned_cols=266 Identities=17% Similarity=0.213 Sum_probs=181.1
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
...++.++.+++|...+.+.|+|||+||++++...|..++..|.. +||+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~G~ 62 (279)
T 4g9e_A 5 YHELETSHGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIG----------------------KKWRVIAPDLPGH 62 (279)
T ss_dssp EEEEEETTEEEEEEECCCCEEEEEEECCTTCCGGGGHHHHHSHHH----------------------HHEEEEEECCTTS
T ss_pred EEEEEcCCceEEEEecCCCCCeEEEECCCCCchhHHHHHHhHHHh----------------------cCCeEEeecCCCC
Confidence 346778888999999988778899999999999999999998544 4999999999999
Q ss_pred CCCCCCCC-CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 97 GRSSVPVK-KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 97 G~S~~~~~-~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
|.|+.+.. ...++++++++++.++++.++.++++++||||||.+|+.+|.++|+ +.++|+++++.... ...
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~-------~~~ 134 (279)
T 4g9e_A 63 GKSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAR-------EEV 134 (279)
T ss_dssp TTSCCCSCHHHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCG-------GGH
T ss_pred CCCCCCCCcccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCC-------Ccc
Confidence 99987532 2456899999999999999999999999999999999999999998 99999998764211 100
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
. ..+.....................+........... .....+... ... ........+......+...
T Consensus 135 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~ 202 (279)
T 4g9e_A 135 -G--QGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEA-SLLDIVART----DGR----ARRIMFEKFGSGTGGNQRD 202 (279)
T ss_dssp -H--HHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCH-HHHHHHHHS----CHH----HHHHHHHHHHHTCBCCHHH
T ss_pred -c--hhhccchhhhhcCcccccHHHHHHHHHhhccCcccH-HHHHHHHhh----hcc----chHHHHHHhhccCCchHHH
Confidence 0 000000000000000001111111222222221111 111111100 000 0000000111111223446
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
.+.++++|+|+|+|++|.++|++..+.+.....++++++++++ ||+++.++|+++++.|.+||++....
T Consensus 203 ~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 203 IVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp HHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSS
T ss_pred HHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhh
Confidence 6788999999999999999999999888722347899999998 99999999999999999999887654
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=238.44 Aligned_cols=252 Identities=16% Similarity=0.138 Sum_probs=171.4
Q ss_pred EEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC--C
Q 018750 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP--V 103 (351)
Q Consensus 26 ~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~--~ 103 (351)
+++|...|+++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.. .
T Consensus 10 ~l~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~D~~G~G~S~~~~~~ 66 (269)
T 4dnp_A 10 ALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLR-----------------------DYRVVLYDLVCAGSVNPDFFD 66 (269)
T ss_dssp HTTCEEECSCSSEEEEECCTTCCGGGGTTTGGGGTT-----------------------TCEEEEECCTTSTTSCGGGCC
T ss_pred HhhhhhcCCCCCEEEEEeCCCCcHHHHHHHHHHHhC-----------------------CcEEEEEcCCCCCCCCCCCCC
Confidence 467888898888999999999999999999999887 999999999999999752 1
Q ss_pred CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc---cchhhhHHHH
Q 018750 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK---LDLQTLSIAI 180 (351)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~ 180 (351)
....++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.......... ..........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (269)
T 4dnp_A 67 FRRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVF 146 (269)
T ss_dssp TTTCSSSHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHH
Confidence 2234589999999999999999999999999999999999999999999999999986432211110 1111111111
Q ss_pred hhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhcc
Q 018750 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (351)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (351)
......... +...+......... ....+.+.+.+...... ......... ...+....+.++
T Consensus 147 ~~~~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~i 207 (269)
T 4dnp_A 147 SAMEANYEA----------WVNGFAPLAVGADV--PAAVREFSRTLFNMRPD---ITLFVSRTV----FNSDMRGVLGLV 207 (269)
T ss_dssp HHHHHCHHH----------HHHHHHHHHHCSSC--HHHHHHHHHHHHHSCHH---HHHHHHHHH----HTCCCGGGGGGC
T ss_pred HhccccHHH----------HHHHhhhhhccCCC--hhHHHHHHHHHHccCcc---hhhhHhhhh----cchhhHhhhccc
Confidence 111100000 00001111111111 11112222211111000 000000000 011223456788
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhCCC-ceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
++|+++|+|++|.+++++.++.+.+.+ ++ ++++++++ ||+++.++|+++++.|.+||++
T Consensus 208 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 208 KVPCHIFQTARDHSVPASVATYLKNHL-GGKNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp CSCEEEEEEESBTTBCHHHHHHHHHHS-SSCEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred cCCEEEEecCCCcccCHHHHHHHHHhC-CCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 999999999999999999999999987 66 89999997 9999999999999999999965
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=234.70 Aligned_cols=246 Identities=14% Similarity=0.128 Sum_probs=159.6
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
+++|||+||++.+...|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++++
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~via~Dl~G~G~S~~~~~-~~~~~~~~a~ 59 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEA----------------------LGHKVTALDLAASGVDPRQIE-EIGSFDEYSE 59 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHHTH
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHh----------------------CCCEEEEeCCCCCCCCCCCcc-cccCHHHHHH
Confidence 45799999999999999999999976 589999999999999976432 3579999999
Q ss_pred HHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhc
Q 018750 116 DVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 116 dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
|+.+++++++ .++++||||||||.+++.+|.++|++|+++|++++......... ......................
T Consensus 60 dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 136 (257)
T 3c6x_A 60 PLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCP---SYVVDKLMEVFPDWKDTTYFTY 136 (257)
T ss_dssp HHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCT---THHHHHHHHHSCCCTTCEEEEE
T ss_pred HHHHHHHhccccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcc---hhHHHHHhhcCcchhhhhhhhc
Confidence 9999999995 58999999999999999999999999999999998532111100 0001111111100000000000
Q ss_pred ------CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 195 ------DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 195 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
..................... .... ....... ... .....+.. ...... ..+ .++|+|+|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~~--~~~~~~~~--~~~~~~---~~~--~~~P~l~i~ 203 (257)
T 3c6x_A 137 TKDGKEITGLKLGFTLLRENLYTLCGP-EEYE-LAKMLTR--KGS--LFQNILAK--RPFFTK---EGY--GSIKKIYVW 203 (257)
T ss_dssp EETTEEEEEEECCHHHHHHHTSTTSCH-HHHH-HHHHHCC--CBC--CCHHHHHH--SCCCCT---TTG--GGSCEEEEE
T ss_pred cCCCCccccccccHHHHHHHHhcCCCH-HHHH-HHHHhcC--CCc--cchhhhcc--ccccCh---hhc--CcccEEEEE
Confidence 000112222222222111111 0011 1111100 000 00000000 000000 111 258999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+++.
T Consensus 204 G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 204 TDQDEIFLPEFQLWQIENY-KPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp CTTCSSSCHHHHHHHHHHS-CCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred eCCCcccCHHHHHHHHHHC-CCCeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999886 8999999988 99999999999999999999753
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=235.71 Aligned_cols=254 Identities=17% Similarity=0.174 Sum_probs=176.9
Q ss_pred CccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
...+++.+|.+++|...|+ +.|+|||+||++++...|..++..|.+ ||+|+++|+|
T Consensus 46 ~~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------g~~vi~~D~~ 102 (306)
T 2r11_A 46 KSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADWSS-----------------------KYRTYAVDII 102 (306)
T ss_dssp EEEEECCTTEEEEEEEESCTTSCEEEEECCTTTCGGGGTTTHHHHHH-----------------------HSEEEEECCT
T ss_pred ceEEEecCCceEEEEeeCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEecCC
Confidence 3567788899999999886 457899999999999999999999987 9999999999
Q ss_pred CC-CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 95 GM-GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 95 G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
|+ |.|..+. ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++..... ....
T Consensus 103 G~gG~s~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~ 176 (306)
T 2r11_A 103 GDKNKSIPEN--VSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFL----PFHH 176 (306)
T ss_dssp TSSSSCEECS--CCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTS----CCCH
T ss_pred CCCCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccC----cccH
Confidence 99 8887654 367899999999999999999999999999999999999999999999999999874321 0111
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhh---HHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAIL---YQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
........... ......+.............. .......+.. .. ..+.... .....
T Consensus 177 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~----~~~~~ 235 (306)
T 2r11_A 177 DFYKYALGLTA-------------SNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQD-GS---RNPNPNA----DGFPY 235 (306)
T ss_dssp HHHHHHHTTTS-------------TTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCS-SS---CCCCCCT----TSSSC
T ss_pred HHHHHHhHHHH-------------HHHHHHHHHHhhCCccccccccccccHHHHHHHH-hh---hhhhhhc----cCCCC
Confidence 11110000000 000011111111111000000 0001111100 00 0000000 00011
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
......+.++++|+|+|+|++|.+++++..+++.+...++++++++++ ||+++.++|+++++.|.+||+
T Consensus 236 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 236 VFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp BCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred CCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 123456788999999999999999999888866665458999999998 999999999999999999995
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=240.99 Aligned_cols=225 Identities=16% Similarity=0.202 Sum_probs=155.6
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
+.|||+||++++...|..+++.|++ +||+|+++|+||||.|.... ..++++++++|
T Consensus 52 ~~VlllHG~~~s~~~~~~la~~La~----------------------~Gy~Via~Dl~GhG~S~~~~--~~~~~~~~~~d 107 (281)
T 4fbl_A 52 IGVLVSHGFTGSPQSMRFLAEGFAR----------------------AGYTVATPRLTGHGTTPAEM--AASTASDWTAD 107 (281)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEECCCTTSSSCHHHH--HTCCHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCccc--cCCCHHHHHHH
Confidence 4599999999999999999999998 79999999999999996433 35678899999
Q ss_pred HHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhc
Q 018750 117 VIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 117 l~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
+.++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++... ....... ...+...... .....
T Consensus 108 ~~~~~~~l~~~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~-------~~~~~~~-~~~~~~~~~~-~~~~~ 178 (281)
T 4fbl_A 108 IVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALR-------MESPDLA-ALAFNPDAPA-ELPGI 178 (281)
T ss_dssp HHHHHHHHHHHCSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSC-------CCCHHHH-HHHTCTTCCS-EEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhc-------ccchhhH-HHHHhHhhHH-hhhcc
Confidence 99999887 457999999999999999999999999999999997631 1111110 0000000000 00000
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCcc
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 274 (351)
............. ...... ..+.... .........+.++++|+|+|+|++|.+
T Consensus 179 --~~~~~~~~~~~~~-~~~~~~----------------------~~~~~~~--~~~~~~~~~l~~i~~P~Lii~G~~D~~ 231 (281)
T 4fbl_A 179 --GSDIKAEGVKELA-YPVTPV----------------------PAIKHLI--TIGAVAEMLLPRVKCPALIIQSREDHV 231 (281)
T ss_dssp --CCCCSSTTCCCCC-CSEEEG----------------------GGHHHHH--HHHHHHHHHGGGCCSCEEEEEESSCSS
T ss_pred --hhhhhhHHHHHhh-hccCch----------------------HHHHHHH--HhhhhccccccccCCCEEEEEeCCCCC
Confidence 0000000000000 000000 0000000 011122356789999999999999999
Q ss_pred CCHHHHHHHHHHhC-CCceEEEcCC-Ccccccc-ChHHHHHHHHHHHHhc
Q 018750 275 AQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKAS 321 (351)
Q Consensus 275 ~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl~~~ 321 (351)
+|++.++.+.+.+. ++++++++++ ||.++++ +++++.+.|.+||+++
T Consensus 232 v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 232 VPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp SCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 99999999999873 4568999998 9999887 5899999999999864
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-32 Score=232.37 Aligned_cols=249 Identities=14% Similarity=0.120 Sum_probs=160.8
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
++|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|+.... ..+++++++
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~rVia~Dl~G~G~S~~~~~-~~~~~~~~a 59 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEA----------------------AGHKVTALDLAASGTDLRKIE-ELRTLYDYT 59 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEECCCTTSTTCCCCGG-GCCSHHHHH
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHh----------------------CCCEEEEecCCCCCCCccCcc-cccCHHHHH
Confidence 346799999999999999999999975 489999999999999976432 357999999
Q ss_pred HHHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC-CHHHHh
Q 018750 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK-TPEKRA 192 (351)
Q Consensus 115 ~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 192 (351)
+|+.++++.++ .++++||||||||++++.+|.++|++|+++|++++......... .............. ......
T Consensus 60 ~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 136 (273)
T 1xkl_A 60 LPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNS---SFVLEQYNERTPAENWLDTQF 136 (273)
T ss_dssp HHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCT---THHHHHHHHTSCTTTTTTCEE
T ss_pred HHHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcH---HHHHHHhhccCChhhHHHHHH
Confidence 99999999997 58999999999999999999999999999999997532211100 00011111100000 000000
Q ss_pred -hc------CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 193 -AV------DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 193 -~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
.. ...................... .. ......... .......+.. ...... . ...++|++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~----~~~~~~~~~~--~~~~~~---~--~~~~~P~l 203 (273)
T 1xkl_A 137 LPYGSPEEPLTSMFFGPKFLAHKLYQLCSPE-DL-ALASSLVRP----SSLFMEDLSK--AKYFTD---E--RFGSVKRV 203 (273)
T ss_dssp EECSCTTSCCEEEECCHHHHHHHTSTTSCHH-HH-HHHHHHCCC----BCCCHHHHHH--CCCCCT---T--TGGGSCEE
T ss_pred hhccCCCCCccccccCHHHHHHHhhccCCHH-HH-HHHHHhcCC----Cchhhhhhhc--ccccch---h--hhCCCCeE
Confidence 00 0001112222222221111110 00 111111000 0000000000 000000 0 11358999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+++...
T Consensus 204 ~i~G~~D~~~p~~~~~~~~~~~-p~~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 204 YIVCTEDKGIPEEFQRWQIDNI-GVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp EEEETTCTTTTHHHHHHHHHHH-CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHCC-
T ss_pred EEEeCCccCCCHHHHHHHHHhC-CCCeEEEeCCCCCCchhcCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999887 8999999998 9999999999999999999987543
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=232.30 Aligned_cols=245 Identities=14% Similarity=0.145 Sum_probs=157.8
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
+.|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|+.... ..+++++++
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~via~Dl~G~G~S~~~~~-~~~~~~~~a 65 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLES----------------------AGHKVTAVDLSAAGINPRRLD-EIHTFRDYS 65 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHHH
T ss_pred CCCeEEEECCCccccchHHHHHHHHHh----------------------CCCEEEEeecCCCCCCCCCcc-cccCHHHHH
Confidence 345799999999999999999999975 499999999999999976432 357899999
Q ss_pred HHHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC-CHHHHh
Q 018750 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK-TPEKRA 192 (351)
Q Consensus 115 ~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 192 (351)
+|+.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++......... .............. ......
T Consensus 66 ~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 142 (264)
T 2wfl_A 66 EPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSL---TYPFEKYNEKCPADMMLDSQF 142 (264)
T ss_dssp HHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCT---THHHHHHHHHSCTTTTTTCEE
T ss_pred HHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcch---hhHHHHhhhcCcchhhhhhhh
Confidence 99999999996 58999999999999999999999999999999997532111100 00011111100000 000000
Q ss_pred -hc----C--ccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 193 -AV----D--LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 193 -~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
.. . .........+........... .. .......... ......+.. ...... . ...++|+|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~----~~~~~~~~~--~~~~~~---~--~~~~~P~l 209 (264)
T 2wfl_A 143 STYGNPENPGMSMILGPQFMALKMFQNCSVE-DL-ELAKMLTRPG----SLFFQDLAK--AKKFST---E--RYGSVKRA 209 (264)
T ss_dssp EEESCTTSCEEEEECCHHHHHHHTSTTSCHH-HH-HHHHHHCCCE----ECCHHHHTT--SCCCCT---T--TGGGSCEE
T ss_pred hhccCCCCCcchhhhhHHHHHHHHhcCCCHH-HH-HHHHhccCCC----ccccccccc--ccccCh---H--HhCCCCeE
Confidence 00 0 000112222222211111100 00 1111110000 000000000 000000 0 11358999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+|++
T Consensus 210 ~i~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 210 YIFCNEDKSFPVEFQKWFVESV-GADKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp EEEETTCSSSCHHHHHHHHHHH-CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred EEEeCCcCCCCHHHHHHHHHhC-CCceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 9999999999999999999887 8999999998 999999999999999999985
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-33 Score=254.26 Aligned_cols=267 Identities=22% Similarity=0.329 Sum_probs=182.7
Q ss_pred CCeeEecCCcccCCCCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCC
Q 018750 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80 (351)
Q Consensus 1 mp~~~~~~~~~~~~~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (351)
||+.++. +.+.+|.+++|...|++ |+|||+||++++...|..++..|.+
T Consensus 1 Mp~i~~~-----------~~~~dG~~l~y~~~G~g-p~VV~lHG~~~~~~~~~~l~~~La~------------------- 49 (456)
T 3vdx_A 1 MPFITVG-----------QENSTSIDLYYEDHGTG-VPVVLIHGFPLSGHSWERQSAALLD------------------- 49 (456)
T ss_dssp -CEEEEE-----------EETTEEEEEEEEEESSS-EEEEEECCTTCCGGGGTTHHHHHHH-------------------
T ss_pred CCeEeec-----------ccccCCeEEEEEEeCCC-CEEEEECCCCCcHHHHHHHHHHHHH-------------------
Confidence 7887776 67788999999999966 5799999999999999999999966
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-CcccceEEEec
Q 018750 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLN 159 (351)
Q Consensus 81 ~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~lvl~~ 159 (351)
+||+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++|+||||||.+++.+|..+ |++|+++|+++
T Consensus 50 ---~Gy~Vi~~D~rG~G~S~~~~--~~~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~ 124 (456)
T 3vdx_A 50 ---AGYRVITYDRRGFGQSSQPT--TGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLA 124 (456)
T ss_dssp ---HTEEEEEECCTTSTTSCCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEES
T ss_pred ---CCcEEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeC
Confidence 59999999999999998766 4679999999999999999999999999999999999998887 89999999999
Q ss_pred cCCCCCCCCCccc-----hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC-----chhhhhHHHHHhhhhhc
Q 018750 160 VTGGGFQCCPKLD-----LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-----TRRAILYQEYVKGISAT 229 (351)
Q Consensus 160 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 229 (351)
+............ ................ .+...++..+.... .........+.......
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (456)
T 3vdx_A 125 SLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRY----------AFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASG 194 (456)
T ss_dssp CCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHH----------HHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTS
T ss_pred CcccccccccccccccchHHHHHHHHHhhhccch----------HHHHHHHHHHhcccccccccccHHHHHHHhhhcccc
Confidence 8754322111110 0111111110000000 00011111111110 01111111111111110
Q ss_pred cCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHH-HHHHHHHHhCCCceEEEcCC-CccccccCh
Q 018750 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERT 307 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p 307 (351)
.. ....... .....+....+.++++|+|+|+|++|.++|++ ..+.+.+.+ ++++++++++ ||+++.++|
T Consensus 195 ~~---~~~~~~~-----~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~-~~~~~~~i~gagH~~~~e~p 265 (456)
T 3vdx_A 195 GF---FAAAAAP-----TTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEGAPHGLLWTHA 265 (456)
T ss_dssp CT---THHHHGG-----GGTTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHC-TTSEEEEETTCCSCTTTTTH
T ss_pred ch---hhhhhhh-----hhhhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHC-CCceEEEeCCCCCcchhhCH
Confidence 00 0000000 00112223456788999999999999999988 666666654 8999999998 999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 018750 308 EEVNQALIDLIKASE 322 (351)
Q Consensus 308 ~~~~~~i~~fl~~~~ 322 (351)
+++.+.|.+||++..
T Consensus 266 ~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 266 EEVNTALLAFLAKAL 280 (456)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998753
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-32 Score=236.32 Aligned_cols=263 Identities=22% Similarity=0.288 Sum_probs=170.4
Q ss_pred CeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 24 GIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 24 g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
+.+++|...++ ..|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|+
T Consensus 31 ~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~G~G~s~ 88 (315)
T 4f0j_A 31 PLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLAD----------------------AGYRVIAVDQVGFCKSS 88 (315)
T ss_dssp EEEEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTSC
T ss_pred CeeEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHH----------------------CCCeEEEeecCCCCCCC
Confidence 45667777643 457899999999999999999999998 69999999999999998
Q ss_pred CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHH
Q 018750 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
.... ..++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++....................
T Consensus 89 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 167 (315)
T 4f0j_A 89 KPAH-YQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWY 167 (315)
T ss_dssp CCSS-CCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHH
T ss_pred CCCc-cccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHH
Confidence 7664 477999999999999999999999999999999999999999999999999999863211000000000011111
Q ss_pred hhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhh-hhhcccCCHHHHHHhhc
Q 018750 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH-ACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 259 (351)
.......... ................. ...+.................... .........+....+.+
T Consensus 168 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 236 (315)
T 4f0j_A 168 RRDLQTSAEG----------IRQYQQATYYAGEWRPE-FDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDR 236 (315)
T ss_dssp HHHTTCCHHH----------HHHHHHHHTSTTCCCGG-GHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGG
T ss_pred hhcccCChHH----------HHHHHHHHHhccccCCc-hHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhccc
Confidence 1110000000 00111111111000000 000000000000000000000000 00000000112235788
Q ss_pred cCccEEEEeecCCccCC----------------HHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 260 AGFLVSVIHGRHDVIAQ----------------ICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+++|+|+|+|++|.++| .+..+.+.+.+ ++++++++++ ||+++.++|+++++.|.+||++.
T Consensus 237 ~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 237 LQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI-PQATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp CCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHS-TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred CCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhc-CCceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 89999999999999999 88888888876 8999999998 99999999999999999999753
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=243.45 Aligned_cols=124 Identities=33% Similarity=0.479 Sum_probs=112.0
Q ss_pred ccccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 17 DAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
..+++.+|.+++|...|+ ..|+|||+||++++...|..++..|.+ +||+|+++|+
T Consensus 5 ~~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~d~ 62 (356)
T 2e3j_A 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAG----------------------AGYRVVAIDQ 62 (356)
T ss_dssp EEEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHH----------------------TTCEEEEECC
T ss_pred EEEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHH----------------------cCCEEEEEcC
Confidence 456778999999999995 457899999999999999999999986 5999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
||||.|..+.....++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 63 ~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 63 RGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TTSTTSCCCCSGGGGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 999999876543467899999999999999999999999999999999999999999999999999764
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=235.99 Aligned_cols=263 Identities=15% Similarity=0.130 Sum_probs=173.8
Q ss_pred cccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+.+.+|.+++|..+++ +.|+|||+||++++...|..++..|.+ +||+|+++|+|
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~ 96 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMG----------------------LDLLVFAHDHV 96 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHT----------------------TTEEEEEECCT
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHHh----------------------CCCeEEEEcCC
Confidence 56777999999998753 456899999999999999999999998 69999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCc----ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK----QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~----~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
|+|.|..+.. ..++++++++|+.++++.+..+ +++|+||||||.+++.+|.++|++|+++|++++..........
T Consensus 97 G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 175 (342)
T 3hju_A 97 GHGQSEGERM-VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESAT 175 (342)
T ss_dssp TSTTSCSSTT-CCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTS
T ss_pred CCcCCCCcCC-CcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhh
Confidence 9999986543 4568899999999999887543 8999999999999999999999999999999987533221111
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
.................. .. ... ...... ....... +................... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~-------~~-~~~----~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (342)
T 3hju_A 176 TFKVLAAKVLNLVLPNLS-------LG-PID----SSVLSR---NKTEVDI----YNSDPLICRAGLKVCFGIQL-LNAV 235 (342)
T ss_dssp HHHHHHHHHHHHHCTTCB-------CC-CCC----GGGSCS---CHHHHHH----HHTCTTCCCSCCBHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHhccccc-------cC-ccc----cccccc---chHHHHH----HhcCcccccccccHHHHHHH-HHHH
Confidence 111111111000000000 00 000 000000 0000001 00000000000000000000 0011
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCC-CccccccChHHHHH---HHHHHHHhcCC
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTEEVNQ---ALIDLIKASEK 323 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~~~p~~~~~---~i~~fl~~~~~ 323 (351)
.+....+.++++|+|+|+|++|.+++++.++.+.+.+.. +++++++++ ||+++.++|+++.+ .+.+||++...
T Consensus 236 ~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (342)
T 3hju_A 236 SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 313 (342)
T ss_dssp HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccC
Confidence 233467788999999999999999999999999998732 789999998 99999999875554 47777776543
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-32 Score=227.86 Aligned_cols=231 Identities=17% Similarity=0.193 Sum_probs=166.0
Q ss_pred cccCCeEEEEEEcCC-----CCCeEEEEecCCCC--ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 20 LNDNGIKIFYRTYGR-----GPTKVILITGLAGT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~-----~~p~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
++.+|.+|++..+.+ +.|+|||+||++++ ...|..+++.|.+ +||+|+++|
T Consensus 6 ~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D 63 (251)
T 2wtm_A 6 IDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNE----------------------IGVATLRAD 63 (251)
T ss_dssp EEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHH----------------------TTCEEEEEC
T ss_pred EecCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHH----------------------CCCEEEEec
Confidence 456899998877653 23679999999999 7889999999987 699999999
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHhC----CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (351)
+||||.|+... ..+++.++++|+.++++.+. .++++|+||||||.+++.+|.++|++|+++|++++...
T Consensus 64 ~~G~G~S~~~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~----- 136 (251)
T 2wtm_A 64 MYGHGKSDGKF--EDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAM----- 136 (251)
T ss_dssp CTTSTTSSSCG--GGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTT-----
T ss_pred CCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHH-----
Confidence 99999998643 35688899999999998884 46899999999999999999999999999999987521
Q ss_pred CccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
... ... ........ ........... .... .. ....+.. . .
T Consensus 137 --~~~-~~~--~~~~~~~~---~~~~~~~~~~~-----~~~~-~~----~~~~~~~------------------~----~ 176 (251)
T 2wtm_A 137 --IPE-IAR--TGELLGLK---FDPENIPDELD-----AWDG-RK----LKGNYVR------------------V----A 176 (251)
T ss_dssp --HHH-HHH--HTEETTEE---CBTTBCCSEEE-----ETTT-EE----EETHHHH------------------H----H
T ss_pred --hHH-HHh--hhhhcccc---CCchhcchHHh-----hhhc-cc----cchHHHH------------------H----H
Confidence 100 000 00000000 00000000000 0000 00 0000000 0 0
Q ss_pred CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
...+....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||++ .++|+++.+.|.+||++.
T Consensus 177 ~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 177 QTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY-KNCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp TTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS-SSEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC-CCcEEEEECCCCccc-chhHHHHHHHHHHHHHHh
Confidence 011234567788999999999999999999999999876 8999999998 9999 999999999999999864
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-33 Score=237.29 Aligned_cols=256 Identities=17% Similarity=0.218 Sum_probs=173.0
Q ss_pred EEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC-
Q 018750 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK- 104 (351)
Q Consensus 26 ~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~- 104 (351)
+++|...|+++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|.....
T Consensus 18 ~~~~~~~g~~~~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~d~~G~G~s~~~~~~ 74 (282)
T 3qvm_A 18 RNNINITGGGEKTVLLAHGFGCDQNMWRFMLPELEK-----------------------QFTVIVFDYVGSGQSDLESFS 74 (282)
T ss_dssp HTTCEEEECSSCEEEEECCTTCCGGGGTTTHHHHHT-----------------------TSEEEECCCTTSTTSCGGGCC
T ss_pred hcceeecCCCCCeEEEECCCCCCcchHHHHHHHHhc-----------------------CceEEEEecCCCCCCCCCCCC
Confidence 455677788878999999999999999999999997 99999999999999986542
Q ss_pred C-CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc----chhhhHHH
Q 018750 105 K-TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL----DLQTLSIA 179 (351)
Q Consensus 105 ~-~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~ 179 (351)
. ...+++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++........+.. ........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 3qvm_A 75 TKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEEL 154 (282)
T ss_dssp TTGGGSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHH
Confidence 1 234899999999999999999999999999999999999999999999999999874322111110 11111111
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
.......... +........... .........+...+...... ............+....+.+
T Consensus 155 ~~~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 216 (282)
T 3qvm_A 155 INLMDKNYIG----------WANYLAPLVMGA-SHSSELIGELSGSFCTTDPI-------VAKTFAKATFFSDYRSLLED 216 (282)
T ss_dssp HHHHHHCHHH----------HHHHHHHHHHCT-TSCHHHHHHHHHHHHHSCHH-------HHHHHHHHHHSCBCGGGGGG
T ss_pred HHHHhcchhh----------HHHHHHhhccCC-ccchhhHHHHHHHHhcCCcH-------HHHHHHHHHhcccHHHHHhc
Confidence 1111000000 000011111111 11111111111111110000 00000000001112245678
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
+++|+++|+|++|.++|++..+.+.+.+ ++.+++++++ ||+++.++|+++.+.|.+||++...
T Consensus 217 i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 217 ISTPALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp CCSCEEEEEEEECTTCCHHHHHHHHHHS-SSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC--
T ss_pred CCCCeEEEEeCCCCcCCHHHHHHHHHhC-CCCcEEEecCCCCcccccCHHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999986 8999999998 9999999999999999999987643
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-32 Score=228.23 Aligned_cols=232 Identities=15% Similarity=0.204 Sum_probs=155.5
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 102 (351)
++..++|. +. .|+|||+||++++...|..+.+.|.+ +||+|+++|+||||.|...
T Consensus 6 ~~~~~~~~--~~-~~~vvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~GhG~s~~~ 60 (247)
T 1tqh_A 6 PPKPFFFE--AG-ERAVLLLHGFTGNSADVRMLGRFLES----------------------KGYTCHAPIYKGHGVPPEE 60 (247)
T ss_dssp CCCCEEEC--CS-SCEEEEECCTTCCTHHHHHHHHHHHH----------------------TTCEEEECCCTTSSSCHHH
T ss_pred CCCCeeeC--CC-CcEEEEECCCCCChHHHHHHHHHHHH----------------------CCCEEEecccCCCCCCHHH
Confidence 45667766 33 45799999999999999999999976 5999999999999976432
Q ss_pred CCCCccchHhHHHHHH---HHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHH-
Q 018750 103 VKKTEYTTKIMAKDVI---ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI- 178 (351)
Q Consensus 103 ~~~~~~~~~~~~~dl~---~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~- 178 (351)
. ..++++++++|+. ++++.++.++++|+||||||.+|+.+|.++| |+++|+++++... . .......
T Consensus 61 ~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~-----~-~~~~~~~~ 130 (247)
T 1tqh_A 61 L--VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYI-----K-SEETMYEG 130 (247)
T ss_dssp H--TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSC-----C-CHHHHHHH
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeec-----C-cchhhhHH
Confidence 1 2457777766654 5677778899999999999999999999998 9999987754210 0 0000000
Q ss_pred HHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhh
Q 018750 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (351)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (351)
..... ..+. ...... ..........+... .......+.. ...+..+.+.
T Consensus 131 ~~~~~------------------~~~~-~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~l~ 179 (247)
T 1tqh_A 131 VLEYA------------------REYK-KREGKS---EEQIEQEMEKFKQT----PMKTLKALQE-----LIADVRDHLD 179 (247)
T ss_dssp HHHHH------------------HHHH-HHHTCC---HHHHHHHHHHHTTS----CCTTHHHHHH-----HHHHHHHTGG
T ss_pred HHHHH------------------HHhh-cccccc---hHHHHhhhhcccCC----CHHHHHHHHH-----HHHHHHhhcc
Confidence 00000 0000 000000 00001111111000 0000000110 0123446788
Q ss_pred ccCccEEEEeecCCccCCHHHHHHHHHHhCCC--ceEEEcCC-CccccccC-hHHHHHHHHHHHHhc
Q 018750 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPV--ARMIDLPG-GHLVSHER-TEEVNQALIDLIKAS 321 (351)
Q Consensus 259 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~g-gH~~~~~~-p~~~~~~i~~fl~~~ 321 (351)
++++|+|+|+|++|.++|++.++.+.+.+ ++ ++++++++ ||+++.|+ |+++++.|.+||++.
T Consensus 180 ~i~~P~Lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 180 LIYAPTFVVQARHDEMINPDSANIIYNEI-ESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp GCCSCEEEEEETTCSSSCTTHHHHHHHHC-CCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEecCCCCCCCcchHHHHHHhc-CCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999987 54 69999998 99999985 799999999999864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=227.60 Aligned_cols=246 Identities=12% Similarity=0.099 Sum_probs=164.4
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
+++|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~ 66 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMRS----------------------SGHNVTALDLGASGINPKQAL-QIPNFSDY 66 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHH
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHh----------------------cCCeEEEeccccCCCCCCcCC-ccCCHHHH
Confidence 4567899999999999999999999987 689999999999999987743 34799999
Q ss_pred HHHHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhh--cccCCHHH
Q 018750 114 AKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF--FRAKTPEK 190 (351)
Q Consensus 114 ~~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 190 (351)
++|+.++++.++ .++++|+||||||.+++.+|.++|++|+++|++++..... ........... ........
T Consensus 67 ~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T 3sty_A 67 LSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGP------NIDATTVCTKAGSAVLGQLDN 140 (267)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBT------TBCHHHHHHHHHHTTTTCTTC
T ss_pred HHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCC------cchHHHHHHHhcccchhhhhh
Confidence 999999999994 7899999999999999999999999999999999864221 11111111111 00000000
Q ss_pred -------HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCcc
Q 018750 191 -------RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (351)
Q Consensus 191 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (351)
..................+....... ............. ...+ ..+.... .. ......++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~-~~~~~~~--~~-----~~~~~~~~P 208 (267)
T 3sty_A 141 CVTYENGPTNPPTTLIAGPKFLATNVYHLSPIE-DLALATALVRPLY---LYLA-EDISKEV--VL-----SSKRYGSVK 208 (267)
T ss_dssp EEECTTCTTSCCCEEECCHHHHHHHTSTTSCHH-HHHHHHHHCCCEE---CCCH-HHHHHHC--CC-----CTTTGGGSC
T ss_pred hhhhhhhhhcccchhhhhHHHHHHhhcccCCHH-HHHHHHHhhccch---hHHH-HHhhcch--hc-----ccccccCCC
Confidence 00000011122333333332222111 1111111111000 0000 0000000 00 011122689
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 264 vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+++|+|++|.+++++..+.+.+.+ ++++++++++ ||++++++|+++++.|.+|+++.
T Consensus 209 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 209 RVFIVATENDALKKEFLKLMIEKN-PPDEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHS-CCSEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCCccCHHHHHHHHHhC-CCceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 999999999999999999999986 8899999987 99999999999999999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-32 Score=233.82 Aligned_cols=257 Identities=11% Similarity=0.100 Sum_probs=165.8
Q ss_pred cccccCCeEEEEEEcCC---CCCeEEEEecCCCCccc-hHH-----HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGP-----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~-~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
+.+..+|.+++|...|+ ++|+|||+||++++... |.. +++.|++ +|+|
T Consensus 14 ~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-----------------------~~~v 70 (286)
T 2qmq_A 14 HSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-----------------------NFVR 70 (286)
T ss_dssp EEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-----------------------TSCE
T ss_pred cccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-----------------------CCCE
Confidence 45677899999999997 46789999999999874 665 7888887 7999
Q ss_pred EEecCCCCCCCCCCCCCCc--cchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 89 CAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~--~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
+++|+||||.|........ ++++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++....
T Consensus 71 i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-- 148 (286)
T 2qmq_A 71 VHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNA-- 148 (286)
T ss_dssp EEEECTTTSTTCCCCCTTCCCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC--
T ss_pred EEecCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcc--
Confidence 9999999998865432122 489999999999999999999999999999999999999999999999999986321
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc--hhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
....... .......... .........+.... ......+.+...+..... ...........
T Consensus 149 --~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 210 (286)
T 2qmq_A 149 --KGWMDWA-AHKLTGLTSS-------------IPDMILGHLFSQEELSGNSELIQKYRGIIQHAPN--LENIELYWNSY 210 (286)
T ss_dssp --CCHHHHH-HHHHHHTTSC-------------HHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTT--HHHHHHHHHHH
T ss_pred --cchhhhh-hhhhcccccc-------------chHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCC--cchHHHHHHHH
Confidence 1111000 0000000000 00001111100000 000011111111100000 00000000000
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
............+.++++|+|+|+|++|.++| ...+.+.+. .+ +++++++++ ||+++.++|+++.+.|.+||+
T Consensus 211 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 211 NNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSKL-DPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHHS-CGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred hhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHHh-cCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 00000000013467889999999999999998 455555554 35 899999998 999999999999999999995
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=227.30 Aligned_cols=245 Identities=13% Similarity=0.140 Sum_probs=163.6
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++++|
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 61 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLES----------------------AGHRVTAVELAASGIDPRPIQ-AVETVDEYSKP 61 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSSCGG-GCCSHHHHHHH
T ss_pred CcEEEECCCCCccccHHHHHHHHHh----------------------CCCEEEEecCCCCcCCCCCCC-ccccHHHhHHH
Confidence 6799999999999999999999988 689999999999999987643 35799999999
Q ss_pred HHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHh---
Q 018750 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA--- 192 (351)
Q Consensus 117 l~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 192 (351)
+.++++.++. ++++|+||||||.+++.+|.++|++|+++|++++.......... ...................
T Consensus 62 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 138 (258)
T 3dqz_A 62 LIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPS---HVLDKYMEMPGGLGDCEFSSHE 138 (258)
T ss_dssp HHHHHHTSCTTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTT---HHHHHHHTSTTCCTTCEEEEEE
T ss_pred HHHHHHHhcccCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcch---HHHHHhcccchhhhhcccchhh
Confidence 9999999988 89999999999999999999999999999999986432211110 0111110000000000000
Q ss_pred ---hcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 193 ---AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 193 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
............+...+....... .............. +...+... .. .......++|+++|+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~----~~---~~~~~~~~~P~l~i~g 205 (258)
T 3dqz_A 139 TRNGTMSLLKMGPKFMKARLYQNCPIE-DYELAKMLHRQGSF-----FTEDLSKK----EK---FSEEGYGSVQRVYVMS 205 (258)
T ss_dssp ETTEEEEEEECCHHHHHHHTSTTSCHH-HHHHHHHHCCCEEC-----CHHHHHTS----CC---CCTTTGGGSCEEEEEE
T ss_pred hhccChhhhhhhHHHHHHHhhccCCHH-HHHHHHHhccCCch-----hhhhhhcc----cc---ccccccccCCEEEEEC
Confidence 000011122333333322221111 11111111110000 10000000 00 0011223689999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
++|.++|++..+.+.+.+ ++++++++++ ||++++++|+++++.|.+|+++.
T Consensus 206 ~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 206 SEDKAIPCDFIRWMIDNF-NVSKVYEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp TTCSSSCHHHHHHHHHHS-CCSCEEEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred CCCeeeCHHHHHHHHHhC-CcccEEEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 999999999999999986 8889999997 99999999999999999999863
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-30 Score=226.93 Aligned_cols=271 Identities=20% Similarity=0.208 Sum_probs=163.1
Q ss_pred cccccc-CCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 17 DAALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 17 ~~~~~~-~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
..++++ +|.+++|...|+ +.++|||+||++++... ..+...+.. ++|+|+++|+|
T Consensus 16 ~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~-~~~~~~~~~----------------------~~~~vi~~D~~ 72 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS-PHHRQLFDP----------------------ERYKVLLFDQR 72 (317)
T ss_dssp EEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC-GGGGGGSCT----------------------TTEEEEEECCT
T ss_pred eeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccc-hhhhhhccc----------------------cCCeEEEECCC
Confidence 345555 799999999985 34579999999875532 222233333 49999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|||.|+.+.....++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.... ...
T Consensus 73 G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-------~~~ 145 (317)
T 1wm1_A 73 GCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR-------KQR 145 (317)
T ss_dssp TSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC-------HHH
T ss_pred CCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCc-------hhh
Confidence 9999986543346789999999999999999999999999999999999999999999999999865311 000
Q ss_pred hhHHHHh-hcccCCHHHH----hhcCccc--cccHHHHHHhhcCCchhh-hhHHHHHhhhhhcc-CCCCCC---cc----
Q 018750 175 TLSIAIR-FFRAKTPEKR----AAVDLDT--HYSQEYLEEYVGSSTRRA-ILYQEYVKGISATG-MQSNYG---FD---- 238 (351)
Q Consensus 175 ~~~~~~~-~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~~---- 238 (351)
...... ......+... ....... .....+............ .....+........ ...... +.
T Consensus 146 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (317)
T 1wm1_A 146 -LHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDF 224 (317)
T ss_dssp -HHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHH
T ss_pred -hhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccch
Confidence 000000 0000000000 0000000 000011111111100000 00000000000000 000000 00
Q ss_pred -hhhh----hhhc-c--cCCHH-HHHHhhccC-ccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Ccccccc-C
Q 018750 239 -GQIH----ACWM-H--KMTQK-DIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE-R 306 (351)
Q Consensus 239 -~~~~----~~~~-~--~~~~~-~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~-~ 306 (351)
.... ..+. . ..... ....+.+++ +|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.+ .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~-p~~~~~~i~~~gH~~~~~~~ 303 (317)
T 1wm1_A 225 ALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSYDEPGI 303 (317)
T ss_dssp HHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTTSHHH
T ss_pred hhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC-CCceEEEECCCCCCCCCcch
Confidence 0000 0000 0 00111 345677785 99999999999999999999999876 8999999998 9998765 6
Q ss_pred hHHHHHHHHHHHH
Q 018750 307 TEEVNQALIDLIK 319 (351)
Q Consensus 307 p~~~~~~i~~fl~ 319 (351)
++++.+.|.+|+.
T Consensus 304 ~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 304 LHQLMIATDRFAG 316 (317)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 8899999999975
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-32 Score=256.94 Aligned_cols=274 Identities=20% Similarity=0.285 Sum_probs=181.8
Q ss_pred ccccc-CCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 18 AALND-NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 18 ~~~~~-~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
.+++. +|.+++|...|++ |+|||+||++++...|..++..|.+ +||+|+++|+|||
T Consensus 240 ~~~~~~dg~~l~~~~~g~~-p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~D~~G~ 296 (555)
T 3i28_A 240 GYVTVKPRVRLHFVELGSG-PAVCLCHGFPESWYSWRYQIPALAQ----------------------AGYRVLAMDMKGY 296 (555)
T ss_dssp EEEEEETTEEEEEEEECSS-SEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTS
T ss_pred eEEEeCCCcEEEEEEcCCC-CEEEEEeCCCCchhHHHHHHHHHHh----------------------CCCEEEEecCCCC
Confidence 44555 8999999999965 5799999999999999999999988 6999999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh-
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT- 175 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~- 175 (351)
|.|+.+.....++++++++|+.++++.++.++++++||||||.+|+.+|.++|++|+++|+++++..............
T Consensus 297 G~S~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 376 (555)
T 3i28_A 297 GESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIK 376 (555)
T ss_dssp TTSCCCSCGGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHh
Confidence 9998876545788999999999999999999999999999999999999999999999999988643221111000000
Q ss_pred ---hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC----------------------------chhhhhHHHHHh
Q 018750 176 ---LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS----------------------------TRRAILYQEYVK 224 (351)
Q Consensus 176 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 224 (351)
.................. .......+...+... .........+..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (555)
T 3i28_A 377 ANPVFDYQLYFQEPGVAEAEL----EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQ 452 (555)
T ss_dssp TCGGGHHHHHHHSTTHHHHHH----HHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHH
T ss_pred cCCccchhHHhhCCCchHHHH----hhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHH
Confidence 000000000000000000 000000111111000 001111111222
Q ss_pred hhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Ccccc
Q 018750 225 GISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVS 303 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~ 303 (351)
.+..........+....... ...+....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 527 (555)
T 3i28_A 453 QFKKSGFRGPLNWYRNMERN----WKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQ 527 (555)
T ss_dssp HHTTTTTHHHHHTTSCHHHH----HHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHH
T ss_pred HHhcccchhHHHHHHhcccc----chhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC-CCceEEEeCCCCCCcc
Confidence 11111100000000000000 001222345688999999999999999999999998876 8999999998 99999
Q ss_pred ccChHHHHHHHHHHHHhcCC
Q 018750 304 HERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 304 ~~~p~~~~~~i~~fl~~~~~ 323 (351)
.++|+++.+.|.+||++...
T Consensus 528 ~e~p~~~~~~i~~fl~~~~~ 547 (555)
T 3i28_A 528 MDKPTEVNQILIKWLDSDAR 547 (555)
T ss_dssp HHSHHHHHHHHHHHHHHHTC
T ss_pred hhCHHHHHHHHHHHHHhccC
Confidence 99999999999999988654
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-31 Score=229.25 Aligned_cols=263 Identities=15% Similarity=0.128 Sum_probs=171.9
Q ss_pred cccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+.+.+|.+++|..+++ ++|+|||+||++++...|..+++.|.+ +||+|+++|+|
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~ 78 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMG----------------------LDLLVFAHDHV 78 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHH----------------------TTEEEEEECCT
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHHh----------------------CCCcEEEeCCC
Confidence 56778999999998764 356899999999999999999999987 69999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCC----cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
|||.|..... ...+++++++|+.++++.++. ++++++||||||.+++.++.++|++|+++|++++....
T Consensus 79 G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~------ 151 (303)
T 3pe6_A 79 GHGQSEGERM-VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA------ 151 (303)
T ss_dssp TSTTSCSSTT-CCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSB------
T ss_pred CCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccC------
Confidence 9999986543 456888999999999988754 38999999999999999999999999999999986311
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
.............. ...... ............... ....... +.................. .....
T Consensus 152 -~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~ 217 (303)
T 3pe6_A 152 -NPESATTFKVLAAK----VLNSVL-PNLSSGPIDSSVLSR---NKTEVDI----YNSDPLICRAGLKVCFGIQ-LLNAV 217 (303)
T ss_dssp -CHHHHHHHHHHHHH----HHHTTC-CSCCCCCCCGGGTCS---CHHHHHH----HHTCTTSCCSCCCHHHHHH-HHHHH
T ss_pred -chhccHHHHHHHHH----HHHHhc-ccccCCccchhhhhc---chhHHHH----hccCccccccchhhhhHHH-HHHHH
Confidence 11110000000000 000000 000000000000000 0000011 1100000000000000000 00011
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEEEcCC-CccccccChHHHHH---HHHHHHHhcCC
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTEEVNQ---ALIDLIKASEK 323 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~~~p~~~~~---~i~~fl~~~~~ 323 (351)
.+....+.++++|+|+|+|++|.+++.+.++.+.+.+.. +.+++++++ ||+++.++|+++.+ .+.+||++...
T Consensus 218 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~ 295 (303)
T 3pe6_A 218 SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 295 (303)
T ss_dssp HHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCC
Confidence 233467788999999999999999999999999998722 789999998 99999999875554 47777776543
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=238.59 Aligned_cols=272 Identities=15% Similarity=0.214 Sum_probs=167.9
Q ss_pred CeEEEEEEcCC----CCCeEEEEecCCCCccc-------------hHHHH---HHhcCCCCCCCCchhhhcccccCCCCC
Q 018750 24 GIKIFYRTYGR----GPTKVILITGLAGTHDA-------------WGPQL---KGLAGTDKPNDDDETILQDSVESGDGG 83 (351)
Q Consensus 24 g~~l~y~~~g~----~~p~vv~~HG~~~~~~~-------------~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (351)
+.+|+|..+|+ +.|+|||+||+++++.. |..++ ..|..
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~---------------------- 83 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDT---------------------- 83 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEET----------------------
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCcccc----------------------
Confidence 78899999984 24789999999999776 77666 45544
Q ss_pred CCeEEEEecCCCCCCCCC-------CCC------------CCccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHH
Q 018750 84 AGIEVCAFDNRGMGRSSV-------PVK------------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACK 143 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~-------~~~------------~~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~ 143 (351)
+||+|+++|+||||.|+. +.. ...++++++++|+.++++.++.++++ |+||||||.+|+.
T Consensus 84 ~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~ 163 (377)
T 3i1i_A 84 NQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQ 163 (377)
T ss_dssp TTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHH
T ss_pred ccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHH
Confidence 699999999999987541 110 01568999999999999999999986 9999999999999
Q ss_pred HHHhCCcccceEEE-eccCCCCCCCCCccchhhhHHHHhhcccC-----------CHH-HH---hhcCccccccHHHHHH
Q 018750 144 LAAMVPERVLSLAL-LNVTGGGFQCCPKLDLQTLSIAIRFFRAK-----------TPE-KR---AAVDLDTHYSQEYLEE 207 (351)
Q Consensus 144 ~a~~~p~~v~~lvl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~---~~~~~~~~~~~~~~~~ 207 (351)
+|.++|++|+++|+ +++..... .............+... .+. .. .............+..
T Consensus 164 ~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 239 (377)
T 3i1i_A 164 WAVHYPHMVERMIGVITNPQNPI----ITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYET 239 (377)
T ss_dssp HHHHCTTTBSEEEEESCCSBCCH----HHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHChHHHHHhcccCcCCCcCC----chhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHH
Confidence 99999999999999 66542100 00000000000000000 000 00 0000000111122222
Q ss_pred hhcCCchh---------hhhHHHHHhhhhhccCCCCCC---cchhhhhhhcccC---CHHHHHHhhccCccEEEEeecCC
Q 018750 208 YVGSSTRR---------AILYQEYVKGISATGMQSNYG---FDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHD 272 (351)
Q Consensus 208 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlii~g~~D 272 (351)
.+...... ......+......... .... +............ ..+....+.++++|+|+|+|++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D 318 (377)
T 3i1i_A 240 TYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSI-ELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQD 318 (377)
T ss_dssp HSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTT-TTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTC
T ss_pred HhhhhhccccccccccchhHHHHHHHHHHhhhh-cccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCc
Confidence 11110000 0001111111111000 0000 0000000000000 12335678899999999999999
Q ss_pred ccCCHHHHHHHHHHhC---CCceEEEcCC--CccccccChHHHHHHHHHHHHhcC
Q 018750 273 VIAQICYARRLAEKLY---PVARMIDLPG--GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 273 ~~~~~~~~~~~~~~~~---~~~~~~~~~g--gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
.++|++.++.+.+.+. ++++++++++ ||++++++|+++++.|.+||++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 319 LLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred cccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 9999999999998752 7899999985 999999999999999999998754
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=236.15 Aligned_cols=274 Identities=16% Similarity=0.164 Sum_probs=172.3
Q ss_pred cccCCeEEEEEEcCCC----CCeEEEEecCCCCcc-------------chHHHHH---HhcCCCCCCCCchhhhcccccC
Q 018750 20 LNDNGIKIFYRTYGRG----PTKVILITGLAGTHD-------------AWGPQLK---GLAGTDKPNDDDETILQDSVES 79 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~~----~p~vv~~HG~~~~~~-------------~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~ 79 (351)
.+.+|.+++|...|+. .|+|||+||++++.. .|..++. .|..
T Consensus 26 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~------------------ 87 (366)
T 2pl5_A 26 SVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT------------------ 87 (366)
T ss_dssp CEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET------------------
T ss_pred ccccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccc------------------
Confidence 4567889999999973 578999999999987 6777764 3433
Q ss_pred CCCCCCeEEEEecCCC--CCCCCCCCCCC-----------ccchHhHHHHHHHHHHHhCCcce-EEEEEchhhHHHHHHH
Q 018750 80 GDGGAGIEVCAFDNRG--MGRSSVPVKKT-----------EYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLA 145 (351)
Q Consensus 80 ~~~~~g~~vi~~D~~G--~G~S~~~~~~~-----------~~~~~~~~~dl~~~l~~~~~~~v-~lvG~S~Gg~~a~~~a 145 (351)
+||+|+++|+|| +|.|....... .++++++++|+.++++.++.+++ +|+||||||.+|+.+|
T Consensus 88 ----~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a 163 (366)
T 2pl5_A 88 ----NQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWS 163 (366)
T ss_dssp ----TTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHH
T ss_pred ----cccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHH
Confidence 599999999999 89887532111 47999999999999999999998 8999999999999999
Q ss_pred HhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC------------CHHHHh---hcCccccccHHHHHHhhc
Q 018750 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK------------TPEKRA---AVDLDTHYSQEYLEEYVG 210 (351)
Q Consensus 146 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~~~~~~~~~ 210 (351)
.++|++|+++|++++..... .............+... ...... ............+...+.
T Consensus 164 ~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T 2pl5_A 164 IAYPNSLSNCIVMASTAEHS----AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFG 239 (366)
T ss_dssp HHSTTSEEEEEEESCCSBCC----HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHT
T ss_pred HhCcHhhhheeEeccCccCC----CccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhh
Confidence 99999999999999874211 00000000000000000 000000 000000011111111111
Q ss_pred CCchh------hhhHHHHHhhhhhccCCCCCC---cchhhhhhhcccCC--HHHHHHhhccCccEEEEeecCCccCCHHH
Q 018750 211 SSTRR------AILYQEYVKGISATGMQSNYG---FDGQIHACWMHKMT--QKDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (351)
Q Consensus 211 ~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 279 (351)
..... ......+...... ....... +............. .+....+.++++|+|+|+|++|.++|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 318 (366)
T 2pl5_A 240 RNPPRGNILSTDFAVGSYLIYQGE-SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ 318 (366)
T ss_dssp TSCCSSCTTTTTTTSCGGGGSTTC-CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH
T ss_pred hhhhcccccchhhhHHHHHHHHHH-hhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHH
Confidence 10000 0000000000000 0000000 00000010000010 12445788999999999999999999999
Q ss_pred HHHHHHHhCC----CceEEEc-CC-CccccccChHHHHHHHHHHHHhc
Q 018750 280 ARRLAEKLYP----VARMIDL-PG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 280 ~~~~~~~~~~----~~~~~~~-~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
++.+.+.+ + +++++++ ++ ||+++.++|+++.+.|.+||++.
T Consensus 319 ~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 319 SREIVKSL-EAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp HHHHHHHH-HHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHh-hhcccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHccC
Confidence 99999987 6 7899999 77 99999999999999999999864
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=223.91 Aligned_cols=122 Identities=25% Similarity=0.355 Sum_probs=100.2
Q ss_pred cccccc-CCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 17 DAALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 17 ~~~~~~-~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
..+++. +|.+++|...|+ +.++|||+||++++... ..+...+.. ++|+|+++|+|
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~-~~~~~~~~~----------------------~~~~vi~~D~~ 69 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN-DKMRRFHDP----------------------AKYRIVLFDQR 69 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC-GGGGGGSCT----------------------TTEEEEEECCT
T ss_pred cceEEcCCCCEEEEEecCCCCCCeEEEECCCCCcccc-HHHHHhcCc----------------------CcceEEEECCC
Confidence 344555 789999999985 34569999998776532 223333333 49999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
|||.|+.+.....++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 70 GSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp TSTTSBSTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCcCCCCCcccccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 9999986543346789999999999999999999999999999999999999999999999999865
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=234.46 Aligned_cols=277 Identities=16% Similarity=0.142 Sum_probs=179.6
Q ss_pred CCccccccCCeEEEEEEcCCC--------C--CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCC
Q 018750 15 APDAALNDNGIKIFYRTYGRG--------P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~--------~--p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
....+++.+|.+|+|..+|+. . |+|||+||++++...|..++..|.+..+ ..
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~------------------~~ 82 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADA------------------EG 82 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBT------------------TT
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhh------------------hc
Confidence 445677889999999988742 2 6899999999999999999998883100 04
Q ss_pred Ce---EEEEecCCCCCCCCCCCC---CCccchHhHHHHHHHHHHHhC----Ccc--eEEEEEchhhHHHHHHHHhCCccc
Q 018750 85 GI---EVCAFDNRGMGRSSVPVK---KTEYTTKIMAKDVIALMDHLG----WKQ--AHVFGHSMGAMIACKLAAMVPERV 152 (351)
Q Consensus 85 g~---~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~dl~~~l~~~~----~~~--v~lvG~S~Gg~~a~~~a~~~p~~v 152 (351)
|| +|+++|+||||.|+.+.. ...+++.++++|+.++++.+. .++ ++|+||||||.+++.+|.++|++|
T Consensus 83 G~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 162 (398)
T 2y6u_A 83 NYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLF 162 (398)
T ss_dssp TEEEEEEEEECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSC
T ss_pred CcceeEEEEEcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchhe
Confidence 89 999999999999975432 136789999999999999754 344 999999999999999999999999
Q ss_pred ceEEEeccCCCCCCC-------CCc----cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc----CCchhhh
Q 018750 153 LSLALLNVTGGGFQC-------CPK----LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG----SSTRRAI 217 (351)
Q Consensus 153 ~~lvl~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 217 (351)
+++|++++....... .+. ............... ..........++. .......
T Consensus 163 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (398)
T 2y6u_A 163 HLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCD------------HFANESEYVKYMRNGSFFTNAHSQ 230 (398)
T ss_dssp SEEEEESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCC------------EESSHHHHHHHHHHTSTTTTSCHH
T ss_pred eEEEEeccccccccccccccccccccccccchhhHHHhhhhccc------------cCCCHHHHHHHhhcCcccccCCHH
Confidence 999999987543110 000 000001111100000 0000111111100 0001111
Q ss_pred hHHHHHhhhhhc--------c-CCCCCCcchhhhhhhcc-cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh
Q 018750 218 LYQEYVKGISAT--------G-MQSNYGFDGQIHACWMH-KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL 287 (351)
Q Consensus 218 ~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~ 287 (351)
..+.+....... . ..........+...... ....+....+..+++|+|+|+|++|.++|++.++.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~ 310 (398)
T 2y6u_A 231 ILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL 310 (398)
T ss_dssp HHHHHHHHHEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC
T ss_pred HHHHHHHhcCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC
Confidence 111211110000 0 00000000000000000 0112344678899999999999999999999999999986
Q ss_pred CCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 288 YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 288 ~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
++++++++++ ||+++.++|+++.+.|.+||++..
T Consensus 311 -~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 311 -QNYHLDVIPGGSHLVNVEAPDLVIERINHHIHEFV 345 (398)
T ss_dssp -SSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEeCCCCccchhcCHHHHHHHHHHHHHHHH
Confidence 8999999998 999999999999999999997653
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=218.36 Aligned_cols=234 Identities=14% Similarity=0.186 Sum_probs=162.5
Q ss_pred CeEEEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 24 GIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 24 g~~l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
|.+++|...|+ ++|+|||+||++++...|. ++..|.+ ||+|+++|+||+|.|+.
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~-~~~~l~~-----------------------g~~v~~~d~~g~g~s~~ 57 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFG-ELEKYLE-----------------------DYNCILLDLKGHGESKG 57 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGGGT-TGGGGCT-----------------------TSEEEEECCTTSTTCCS
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHHHH-HHHHHHh-----------------------CCEEEEecCCCCCCCCC
Confidence 67788988886 4678999999999999999 8888875 99999999999999983
Q ss_pred CCCCCccchHhHHHHHHHHH------HHhCCcceEEEEEchhhHHHHHHHHh-CCcccceEEEeccCCCCCCCCCccchh
Q 018750 102 PVKKTEYTTKIMAKDVIALM------DHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l------~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
. ..++++++++|+.+++ +.++ +++++||||||.+++.++.+ +|+ |+++|++++..... .....
T Consensus 58 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~----~~~~~ 127 (245)
T 3e0x_A 58 Q---CPSTVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFD----KLDKD 127 (245)
T ss_dssp C---CCSSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCT----TSCHH
T ss_pred C---CCcCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccc----cccHH
Confidence 3 3678999999999999 8887 99999999999999999999 999 99999999864211 11111
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
.................... ............................ ...+..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 181 (245)
T 3e0x_A 128 FMEKIYHNQLDNNYLLECIG----GIDNPLSEKYFETLEKDPDIMINDLIAC----------------------KLIDLV 181 (245)
T ss_dssp HHHHHHTTCCCHHHHHHHHT----CSCSHHHHHHHTTSCSSHHHHHHHHHHH----------------------HHCBCG
T ss_pred HHHHHHHHHHHhhcCccccc----ccchHHHHHHHHHHhcCcHHHHHHHHHh----------------------ccccHH
Confidence 11111111000000000000 0000111111111000000000000000 001112
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
..+.++++|+++|+|++|.+++++..+.+.+.+ ++++++++++ ||+++.++|+++.+.|.+||
T Consensus 182 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 182 DNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-SSEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc-CCceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 456788999999999999999999999999986 8899999997 99999999999999999885
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=233.79 Aligned_cols=273 Identities=14% Similarity=0.113 Sum_probs=173.0
Q ss_pred cccCCeEEEEEEcCCC----CCeEEEEecCCCCccc---------hHHHHH---HhcCCCCCCCCchhhhcccccCCCCC
Q 018750 20 LNDNGIKIFYRTYGRG----PTKVILITGLAGTHDA---------WGPQLK---GLAGTDKPNDDDETILQDSVESGDGG 83 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~~----~p~vv~~HG~~~~~~~---------~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (351)
.+++|.+++|...|+. .|+|||+||++++... |..+++ .|..
T Consensus 39 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~---------------------- 96 (377)
T 2b61_A 39 GKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDT---------------------- 96 (377)
T ss_dssp CEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEET----------------------
T ss_pred ceecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCccccccc----------------------
Confidence 5668999999999862 5789999999999988 888875 3644
Q ss_pred CCeEEEEecCCC-CCCCCCCCCC------------CccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHHHHHhCC
Q 018750 84 AGIEVCAFDNRG-MGRSSVPVKK------------TEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 84 ~g~~vi~~D~~G-~G~S~~~~~~------------~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p 149 (351)
+||+|+++|+|| +|.|+.+... ..++++++++|+.++++.++.++++ |+||||||.+|+.+|.++|
T Consensus 97 ~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 176 (377)
T 2b61_A 97 DRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYP 176 (377)
T ss_dssp TTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHST
T ss_pred CCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCc
Confidence 599999999999 7888765310 1478999999999999999999988 9999999999999999999
Q ss_pred cccceEEEeccCCCCCCCCCccchhhhHH-HHhhcccCC-------------HHHH---hhcCccccccHHHHHHhhcCC
Q 018750 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSI-AIRFFRAKT-------------PEKR---AAVDLDTHYSQEYLEEYVGSS 212 (351)
Q Consensus 150 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~---~~~~~~~~~~~~~~~~~~~~~ 212 (351)
++|+++|++++..... . ....... ....+.... .... .............+...+...
T Consensus 177 ~~v~~lvl~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (377)
T 2b61_A 177 DFMDNIVNLCSSIYFS----A-EAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRA 251 (377)
T ss_dssp TSEEEEEEESCCSSCC----H-HHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTC
T ss_pred hhhheeEEeccCcccc----c-cchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccc
Confidence 9999999999863210 0 0000000 000000000 0000 000000000111111111111
Q ss_pred chh-------hhhHHHHHhhhhh--ccCCCCCCcchhhhhhhccc---CCHHHHHHhhccCccEEEEeecCCccCCH---
Q 018750 213 TRR-------AILYQEYVKGISA--TGMQSNYGFDGQIHACWMHK---MTQKDIQTIRSAGFLVSVIHGRHDVIAQI--- 277 (351)
Q Consensus 213 ~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvlii~g~~D~~~~~--- 277 (351)
... ....+.+...... ........+........... ...+....+.++++|+|+|+|++|.++|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~ 331 (377)
T 2b61_A 252 TKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDL 331 (377)
T ss_dssp BCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHH
T ss_pred cccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccch
Confidence 000 0011111110000 00000000000001000000 01123567788999999999999999999
Q ss_pred -HHHHHHHHHhCCCceEEEcC-C-CccccccChHHHHHHHHHHHHh
Q 018750 278 -CYARRLAEKLYPVARMIDLP-G-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~-g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
+.++.+.+.+ +++++++++ + ||+++.++|+++++.|.+||++
T Consensus 332 ~~~~~~l~~~~-~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 332 YKSKQLLEQSG-VDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHHTT-CEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcC-CCceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 8888888875 889999999 7 9999999999999999999975
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=231.24 Aligned_cols=260 Identities=13% Similarity=0.142 Sum_probs=166.6
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecC--CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
....++.++..++|.. ++++|+|||+||+ +++...|..+++.|.+ +|+|+++|+
T Consensus 22 ~~~~v~~~~~~~~~~~-~~~~p~vv~lHG~G~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~ 77 (292)
T 3l80_A 22 NKEMVNTLLGPIYTCH-REGNPCFVFLSGAGFFSTADNFANIIDKLPD-----------------------SIGILTIDA 77 (292)
T ss_dssp EEEEECCTTSCEEEEE-ECCSSEEEEECCSSSCCHHHHTHHHHTTSCT-----------------------TSEEEEECC
T ss_pred CcceEEecCceEEEec-CCCCCEEEEEcCCCCCcHHHHHHHHHHHHhh-----------------------cCeEEEEcC
Confidence 3466777788888874 3466889999955 5667789999988886 999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC--CCCc-
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCPK- 170 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~- 170 (351)
||||.|+.... ..++++++++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++..+... ....
T Consensus 78 ~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 156 (292)
T 3l80_A 78 PNSGYSPVSNQ-ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSD 156 (292)
T ss_dssp TTSTTSCCCCC-TTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSS
T ss_pred CCCCCCCCCCc-ccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccc
Confidence 99999984332 4789999999999999999999999999999999999999999999999999996531100 0000
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCch--hhhhHHHHHhhhhhccC-CCCCCcchhhhhhhcc
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGM-QSNYGFDGQIHACWMH 247 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 247 (351)
.... ............... .+........+..... ...........+..... .. ......+
T Consensus 157 ~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~------ 220 (292)
T 3l80_A 157 LYPQ-LALRRQKLKTAADRL--------NYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPD-FKIRLAL------ 220 (292)
T ss_dssp SSHH-HHHHHHTCCSHHHHH--------HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTT-CCSSCCC------
T ss_pred cchh-HHHHHHHHhccCchh--------hhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccc-cchhhhh------
Confidence 0000 000001111000000 0000011111111000 00011111111111111 00 0000000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
...+..+.++. ++|+|+|+|++|.+++++ + .+.+.+ ++.+ +++++ ||+++.++|+++++.|.+||++.+
T Consensus 221 -~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~-~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 221 -GEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKH-TQTK-LILCGQHHYLHWSETNSILEKVEQLLSNHE 290 (292)
T ss_dssp -CGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCC-TTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCT
T ss_pred -cchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccC-CCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhcc
Confidence 00111124556 899999999999999988 6 666654 7788 88887 999999999999999999998754
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-33 Score=245.53 Aligned_cols=280 Identities=19% Similarity=0.222 Sum_probs=173.6
Q ss_pred CCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+..+++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ ||+|+++|+|
T Consensus 5 ~~~~~~~~~g~~~~~~~~g~~-p~vv~lHG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~D~~ 60 (304)
T 3b12_A 5 FERRLVDVGDVTINCVVGGSG-PALLLLHGFPQNLHMWARVAPLLAN-----------------------EYTVVCADLR 60 (304)
Confidence 345678889999999999865 5699999999999999999998886 9999999999
Q ss_pred CCCCCCCCCC---CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 95 GMGRSSVPVK---KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 95 G~G~S~~~~~---~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
|||.|+.+.. ...++++++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++......... .
T Consensus 61 G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~ 139 (304)
T 3b12_A 61 GYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEE-V 139 (304)
Confidence 9999987632 24778999999999999999989999999999999999999999999999999998643211000 0
Q ss_pred chhhhHHHHhhcccCCH--HHHhhc-CccccccHH-HHHHhhcCC-chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 172 DLQTLSIAIRFFRAKTP--EKRAAV-DLDTHYSQE-YLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
................+ ...... .....+... ++....... .........+...+..... .............
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 217 (304)
T 3b12_A 140 DRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAA--IHGSCCDYRAGGT 217 (304)
Confidence 00000000000000000 000000 000000000 000000000 0011111111111110000 0000000000000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccC-CHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIA-QICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
..........+.++++|+|+|+|++|.++ +....+.+.+. .++++++++ + ||+++.++|+++++.|.+||++...
T Consensus 218 ~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 218 IDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPR-LANMRFASL-PGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 00111111226788999999999999554 55566666664 478888888 6 9999999999999999999987754
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=239.14 Aligned_cols=273 Identities=16% Similarity=0.159 Sum_probs=170.7
Q ss_pred ccCCeEEEEEEcCC----CCCeEEEEecCCCCccc---hHHHHH---HhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDA---WGPQLK---GLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 21 ~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~---~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
+.+|.+++|...|+ +.|+|||+||++++... |..++. .|.. +||+|++
T Consensus 90 ~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~----------------------~~~~Vi~ 147 (444)
T 2vat_A 90 ILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDT----------------------SRYFIIC 147 (444)
T ss_dssp EEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCT----------------------TTCEEEE
T ss_pred EecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhc----------------------cCCEEEE
Confidence 36788999999996 24789999999999988 887765 3533 5999999
Q ss_pred ecCCC--CCCCCCCCC----C---------CccchHhHHHHHHHHHHHhCCcc-eEEEEEchhhHHHHHHHHhCCcccce
Q 018750 91 FDNRG--MGRSSVPVK----K---------TEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLS 154 (351)
Q Consensus 91 ~D~~G--~G~S~~~~~----~---------~~~~~~~~~~dl~~~l~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~ 154 (351)
+|+|| +|.|..... . ..++++++++|+.++++.++.++ ++|+||||||++|+.+|.++|++|++
T Consensus 148 ~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~ 227 (444)
T 2vat_A 148 LNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRK 227 (444)
T ss_dssp ECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCC
T ss_pred ecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhhe
Confidence 99999 688864210 0 13699999999999999999988 99999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCccchhhhHHHHh-hcc--cCC----------HH-HH---hhcCccccccHHHHHHhhcCCch---
Q 018750 155 LALLNVTGGGFQCCPKLDLQTLSIAIR-FFR--AKT----------PE-KR---AAVDLDTHYSQEYLEEYVGSSTR--- 214 (351)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~----------~~-~~---~~~~~~~~~~~~~~~~~~~~~~~--- 214 (351)
+|++++..... .. ...+....+ .+. ... +. .. .............+...+.....
T Consensus 228 lVli~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (444)
T 2vat_A 228 IVPIATSCRQS----GW-CAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQA 302 (444)
T ss_dssp EEEESCCSBCC----HH-HHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-
T ss_pred EEEEeccccCC----cc-chhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccc
Confidence 99999864211 00 000000000 000 000 00 00 00000000000111111111000
Q ss_pred --------------------------hhhhHHHHHhhhhhc--cCCCCCCcchhhhhhhcccC----CHHHHHHhhccCc
Q 018750 215 --------------------------RAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKM----TQKDIQTIRSAGF 262 (351)
Q Consensus 215 --------------------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~ 262 (351)
.....+.+.+..... .......+............ ..+....+.++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~ 382 (444)
T 2vat_A 303 GRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQ 382 (444)
T ss_dssp --------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCS
T ss_pred cccccccccccccccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCC
Confidence 000011111000000 00000000000000000000 0124567889999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcC-C-CccccccChHHHHHHHHHHHHhc
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
|+|+|+|++|.+++++.++++.+.+ +++++++++ + ||++++++|+++++.|.+||++.
T Consensus 383 PvLvi~G~~D~~~p~~~~~~l~~~~-p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 383 PALIICARSDGLYSFDEHVEMGRSI-PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp CEEEEECTTCSSSCHHHHHHHHHHS-TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHHC-CCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999986 899999999 7 99999999999999999999753
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-30 Score=223.79 Aligned_cols=255 Identities=18% Similarity=0.237 Sum_probs=156.1
Q ss_pred eEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC
Q 018750 25 IKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (351)
Q Consensus 25 ~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (351)
.+++|...|.+.|+|||+||++++...|..+++.|.+. .+|+|+++|+||||.|+.+..
T Consensus 27 ~~~~~~~~g~~~p~lvllHG~~~~~~~w~~~~~~L~~~---------------------~~~~via~Dl~GhG~S~~~~~ 85 (316)
T 3c5v_A 27 DTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISR---------------------VQCRIVALDLRSHGETKVKNP 85 (316)
T ss_dssp EEEEEEEECSSSCEEEEECCTTCCGGGGHHHHHHHHTT---------------------BCCEEEEECCTTSTTCBCSCT
T ss_pred EEEEEEecCCCCcEEEEECCCCcccccHHHHHHHHhhc---------------------CCeEEEEecCCCCCCCCCCCc
Confidence 57888888866678999999999999999999999740 189999999999999986543
Q ss_pred CCccchHhHHHHHHHHHHHh--CC-cceEEEEEchhhHHHHHHHHh--CCcccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 105 KTEYTTKIMAKDVIALMDHL--GW-KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~--~~-~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
..++++++++|+.++++.+ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++.. ..........
T Consensus 86 -~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~-------~~~~~~~~~~ 156 (316)
T 3c5v_A 86 -EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVE-------GTAMDALNSM 156 (316)
T ss_dssp -TCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCH-------HHHHHHHHHH
T ss_pred -cccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccc-------cchhhhHHHH
Confidence 4689999999999999999 65 789999999999999999996 576 99999998641 1100000000
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcC-C-chhhhhHHHHHhhhhhcc---------CCCCCCcc---hhhhhhh
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-S-TRRAILYQEYVKGISATG---------MQSNYGFD---GQIHACW 245 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~ 245 (351)
....... ... .............. . .............+.... ....+.+. ......+
T Consensus 157 ~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (316)
T 3c5v_A 157 QNFLRGR-------PKT-FKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYW 228 (316)
T ss_dssp HHHHHHS-------CSC-BSSHHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHH
T ss_pred HHHHhhC-------ccc-cccHHHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhh
Confidence 0000000 000 00000000000000 0 000000000000000000 00000000 0000000
Q ss_pred cccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
.... ......+.++++|+|+|+|++|.+.+..... . +.++.+++++++ ||++++|+|+++++.|.+||.+..
T Consensus 229 ~~~~-~~~~~~~~~i~~P~Lli~g~~D~~~~~~~~~---~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 229 DGWF-RGLSNLFLSCPIPKLLLLAGVDRLDKDLTIG---Q-MQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp HHHH-TTHHHHHHHSSSCEEEEESSCCCCCHHHHHH---H-HTTCSEEEECCCCSSCHHHHSHHHHHHHHHHHHHHTT
T ss_pred hhhh-hhhHHHhhcCCCCEEEEEecccccccHHHHH---h-hCCceeEEEcCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 0000 0112345678999999999999875533222 2 346789999998 999999999999999999998654
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=224.84 Aligned_cols=236 Identities=16% Similarity=0.204 Sum_probs=171.4
Q ss_pred CccccccCCeEEEEEEcCC---CCCeEEEEecCCCC--ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 16 PDAALNDNGIKIFYRTYGR---GPTKVILITGLAGT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
...+++.+|.+++|...++ +.|+|||+||++++ ...|..+...|.+ +||.|++
T Consensus 23 ~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~ 80 (270)
T 3pfb_A 23 ATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRD----------------------ENIASVR 80 (270)
T ss_dssp EEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHH----------------------TTCEEEE
T ss_pred eEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHh----------------------CCcEEEE
Confidence 4567788999999998874 35689999999988 5568899999987 6999999
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
+|+||+|.|.... ..+++.++++|+.++++.+ +.++++|+||||||.+++.++..+|++|+++|++++..
T Consensus 81 ~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~---- 154 (270)
T 3pfb_A 81 FDFNGHGDSDGKF--ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAA---- 154 (270)
T ss_dssp ECCTTSTTSSSCG--GGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCT----
T ss_pred EccccccCCCCCC--CccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEecccc----
Confidence 9999999998754 4678899999999999988 66899999999999999999999999999999999763
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
....... ...... ..+........... ........+....
T Consensus 155 ---~~~~~~~---~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------------------- 194 (270)
T 3pfb_A 155 ---TLKGDAL---EGNTQG------------VTYNPDHIPDRLPF--KDLTLGGFYLRIA-------------------- 194 (270)
T ss_dssp ---HHHHHHH---HTEETT------------EECCTTSCCSEEEE--TTEEEEHHHHHHH--------------------
T ss_pred ---ccchhhh---hhhhhc------------cccCcccccccccc--cccccchhHhhcc--------------------
Confidence 1110000 000000 00000000000000 0000000000000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
...+....+.++++|+|+++|++|.+++++.++.+.+.+ ++++++++++ ||.++.++++++.+.|.+||++..
T Consensus 195 --~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 195 --QQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY-QNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp --HHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEETTCCTTCCTHHHHHHHHHHHHHHC---
T ss_pred --cccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC-CCCeEEEcCCCCcccCccchHHHHHHHHHHHhhcC
Confidence 001234567888999999999999999999999999985 8999999998 999999999999999999998653
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=221.31 Aligned_cols=239 Identities=15% Similarity=0.124 Sum_probs=144.3
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
++|+|||+||++++...|.++++.|.+ ++|+|+++|+||||.|+... .+++++++
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~~~~vi~~Dl~GhG~S~~~~---~~~~~~~a 69 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSGADWQPVLSHLAR----------------------TQCAALTLDLPGHGTNPERH---CDNFAEAV 69 (264)
T ss_dssp TBCEEEEECCTTCCGGGGHHHHHHHTT----------------------SSCEEEEECCTTCSSCC----------CHHH
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHhcc----------------------cCceEEEecCCCCCCCCCCC---ccCHHHHH
Confidence 347899999999999999999999984 39999999999999998643 35889999
Q ss_pred HHHHHHHHHhCCcc--eEEEEEchhhHHHHH---HHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 115 KDVIALMDHLGWKQ--AHVFGHSMGAMIACK---LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 115 ~dl~~~l~~~~~~~--v~lvG~S~Gg~~a~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
+|+.++++.++.++ ++|+||||||.+|+. +|.++|++|+++|++++.... .. ........... .. ...
T Consensus 70 ~~l~~~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~----~~-~~~~~~~~~~~-~~-~~~ 142 (264)
T 1r3d_A 70 EMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGL----QE-NEEKAARWQHD-QQ-WAQ 142 (264)
T ss_dssp HHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCC----CS-HHHHHHHHHHH-HH-HHH
T ss_pred HHHHHHHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCC----CC-hhhhhhhhccc-HH-HHH
Confidence 99999999998876 999999999999999 888899999999999865311 00 00000000000 00 000
Q ss_pred HHhhcCccccccHHHHHHhhcCCc---hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEE
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSST---RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (351)
..... .....+..+..... ........+....... ....+....... ......+..+.+.++++|+|+
T Consensus 143 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~li 213 (264)
T 1r3d_A 143 RFSQQ-----PIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSAN---LGSSVAHMLLAT-SLAKQPYLLPALQALKLPIHY 213 (264)
T ss_dssp HHHHS-----CHHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTS---CHHHHHHHHHHT-CGGGCCCCHHHHHTCSSCEEE
T ss_pred Hhccc-----cHHHHHHHHhhhhhhhccCHHHHHHHHHHHhhc---chHHHHHHHHhh-hhccCccHHHHHHhcCCCEEE
Confidence 00000 00001111100000 0000001111100000 000000000000 000011234567889999999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 267 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
|+|++|..++ .+.+.+ + .+++++++ ||++++|+|+++++.|.+||++.
T Consensus 214 i~G~~D~~~~-----~~~~~~-~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 214 VCGEQDSKFQ-----QLAESS-G-LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp EEETTCHHHH-----HHHHHH-C-SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred EEECCCchHH-----HHHHHh-C-CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999998642 334444 3 67899998 99999999999999999999864
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=207.66 Aligned_cols=192 Identities=20% Similarity=0.278 Sum_probs=167.9
Q ss_pred CccccccCCeEEE---EEEcCCCCCeEEEEecCCCCccchHH--HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 16 PDAALNDNGIKIF---YRTYGRGPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 16 ~~~~~~~~g~~l~---y~~~g~~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
+..+++.+|.+++ |...| ..|+||++||++++...|.. +...|.+ +||.|++
T Consensus 5 ~~~~~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~ 61 (207)
T 3bdi_A 5 QEEFIDVNGTRVFQRKMVTDS-NRRSIALFHGYSFTSMDWDKADLFNNYSK----------------------IGYNVYA 61 (207)
T ss_dssp EEEEEEETTEEEEEEEECCTT-CCEEEEEECCTTCCGGGGGGGTHHHHHHT----------------------TTEEEEE
T ss_pred eeEEEeeCCcEEEEEEEeccC-CCCeEEEECCCCCCccccchHHHHHHHHh----------------------CCCeEEE
Confidence 3456788999999 77766 45689999999999999999 9999998 6899999
Q ss_pred ecCCCCCCC---CCCCCCCcc-chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 91 FDNRGMGRS---SVPVKKTEY-TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 91 ~D~~G~G~S---~~~~~~~~~-~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
+|+||+|.| ..+. ..+ +.+++++++.++++.++.++++++|||+||.+++.++.++|++++++|++++....
T Consensus 62 ~d~~g~g~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-- 137 (207)
T 3bdi_A 62 PDYPGFGRSASSEKYG--IDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-- 137 (207)
T ss_dssp ECCTTSTTSCCCTTTC--CTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG--
T ss_pred EcCCcccccCcccCCC--CCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc--
Confidence 999999999 6554 356 89999999999999999899999999999999999999999999999999975210
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
..
T Consensus 138 -----~~------------------------------------------------------------------------- 139 (207)
T 3bdi_A 138 -----SL------------------------------------------------------------------------- 139 (207)
T ss_dssp -----GG-------------------------------------------------------------------------
T ss_pred -----ch-------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
...+.++++|+++++|++|.+++++..+.+.+.+ ++.+++++++ ||..+.++++++.+.|.+||++
T Consensus 140 -------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 140 -------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp -------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred -------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhc-CCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 1234667799999999999999999999999986 8899999998 9999999999999999999975
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=218.82 Aligned_cols=227 Identities=14% Similarity=0.164 Sum_probs=147.9
Q ss_pred cccCCeEEEEEEcCC------CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 20 LNDNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~------~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
...+|.+++|...++ +.|+|||+||++++...|..+++.|++ +||+|+++|+
T Consensus 13 ~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~----------------------~G~~Vi~~D~ 70 (305)
T 1tht_A 13 RVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST----------------------NGFHVFRYDS 70 (305)
T ss_dssp EETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHT----------------------TTCCEEEECC
T ss_pred EcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHH----------------------CCCEEEEeeC
Confidence 344789999988763 347899999999999999999999987 6999999999
Q ss_pred CCC-CCCCCCCCCCccchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 94 RGM-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 94 ~G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
||| |.|+.+. ..++++++++|+.++++.+ +.++++|+||||||.+|+.+|.+ | +|+++|++++..
T Consensus 71 rGh~G~S~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~------- 139 (305)
T 1tht_A 71 LHHVGLSSGSI--DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVV------- 139 (305)
T ss_dssp CBCC----------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCS-------
T ss_pred CCCCCCCCCcc--cceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCch-------
Confidence 999 9997654 3678899999988888765 77899999999999999999998 7 899999987642
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
... .... .......... .......... .. .... ....+........ + ..
T Consensus 140 ~~~-~~~~---~~~~~~~~~~-~~~~~~~~~~------~~-~~~~---~~~~~~~~~~~~~--------------~--~~ 188 (305)
T 1tht_A 140 NLR-DTLE---KALGFDYLSL-PIDELPNDLD------FE-GHKL---GSEVFVRDCFEHH--------------W--DT 188 (305)
T ss_dssp CHH-HHHH---HHHSSCGGGS-CGGGCCSEEE------ET-TEEE---EHHHHHHHHHHTT--------------C--SS
T ss_pred hHH-HHHH---HHhhhhhhhc-chhhCccccc------cc-cccc---CHHHHHHHHHhcc--------------c--cc
Confidence 110 0000 0000000000 0000000000 00 0000 0000110000000 0 00
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccChHHHH
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVN 311 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p~~~~ 311 (351)
..+....+.++++|+|+|+|++|.++|++.++.+.+.+. ++++++++++ ||.++ ++|+.+.
T Consensus 189 ~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~ 251 (305)
T 1tht_A 189 LDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLR 251 (305)
T ss_dssp HHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHH
T ss_pred hhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHH
Confidence 012345678899999999999999999999999998763 5789999998 99986 8887543
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=218.36 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=163.6
Q ss_pred cccccc----CCeEEEEEEcCCC---CCeEEEEecCCCCccchH--HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 018750 17 DAALND----NGIKIFYRTYGRG---PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (351)
Q Consensus 17 ~~~~~~----~g~~l~y~~~g~~---~p~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (351)
..++++ +|.+++|...+.. .|+|||+||++++...|. .+...|.+ +||+
T Consensus 11 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~ 68 (270)
T 3llc_A 11 THAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAAS----------------------LGVG 68 (270)
T ss_dssp EEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHH----------------------HTCE
T ss_pred cceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHh----------------------CCCc
Confidence 345555 9999999965543 689999999999876653 36677755 5999
Q ss_pred EEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh---CC---cccceEEEeccC
Q 018750 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---VP---ERVLSLALLNVT 161 (351)
Q Consensus 88 vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~---~p---~~v~~lvl~~~~ 161 (351)
|+++|+||+|.|.... ..++++++++|+.++++.++.++++++||||||.+|+.++.+ +| ++|+++|++++.
T Consensus 69 v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~ 146 (270)
T 3llc_A 69 AIRFDYSGHGASGGAF--RDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPA 146 (270)
T ss_dssp EEEECCTTSTTCCSCG--GGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCC
T ss_pred EEEeccccCCCCCCcc--ccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCc
Confidence 9999999999998655 467899999999999999998999999999999999999999 99 899999999986
Q ss_pred CCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcC----Cc-hhhhhHHHHHhhhhhccCCCCCC
Q 018750 162 GGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS----ST-RRAILYQEYVKGISATGMQSNYG 236 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (351)
.. ..... .......... .......... .. ........+.....
T Consensus 147 ~~-------~~~~~------~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 194 (270)
T 3llc_A 147 PD-------FTSDL------IEPLLGDRER----------AELAENGYFEEVSEYSPEPNIFTRALMEDGR--------- 194 (270)
T ss_dssp TT-------HHHHT------TGGGCCHHHH----------HHHHHHSEEEECCTTCSSCEEEEHHHHHHHH---------
T ss_pred cc-------chhhh------hhhhhhhhhh----------hhhhccCcccChhhcccchhHHHHHHHhhhh---------
Confidence 31 11000 0000000000 0000000000 00 00000000000000
Q ss_pred cchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC--ceEEEcCC-Ccccc-ccChHHHHH
Q 018750 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV--ARMIDLPG-GHLVS-HERTEEVNQ 312 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~g-gH~~~-~~~p~~~~~ 312 (351)
.......+.++++|+++++|++|.+++.+.++.+.+.+ ++ ++++++++ ||+.. .+.++++.+
T Consensus 195 -------------~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 260 (270)
T 3llc_A 195 -------------ANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHL-PADDVVLTLVRDGDHRLSRPQDIDRMRN 260 (270)
T ss_dssp -------------HTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTS-CSSSEEEEEETTCCSSCCSHHHHHHHHH
T ss_pred -------------hhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhc-CCCCeeEEEeCCCcccccccccHHHHHH
Confidence 00011345678899999999999999999999999987 65 89999997 99655 467899999
Q ss_pred HHHHHHHh
Q 018750 313 ALIDLIKA 320 (351)
Q Consensus 313 ~i~~fl~~ 320 (351)
.|.+||++
T Consensus 261 ~i~~fl~~ 268 (270)
T 3llc_A 261 AIRAMIEP 268 (270)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhcC
Confidence 99999974
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=208.95 Aligned_cols=193 Identities=20% Similarity=0.295 Sum_probs=164.2
Q ss_pred CccccccCCeEEEEEEcC----CCCCeEEEEecCCCCccchHH--HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 16 PDAALNDNGIKIFYRTYG----RGPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g----~~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
...+++.+|.+++|...+ +++|+||++||++++...|.. +.+.|.+ +||.|+
T Consensus 8 ~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~ 65 (210)
T 1imj_A 8 REGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQ----------------------AGYRAV 65 (210)
T ss_dssp CCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHH----------------------TTCEEE
T ss_pred ccceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHHH----------------------CCCeEE
Confidence 355778899999999873 356789999999999999988 5888887 699999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHH--HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMA--KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~--~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
++|+||+|.|.... ...++++.+ +++.++++.++.++++++|||+||.+++.++..+|++++++|++++....
T Consensus 66 ~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~--- 140 (210)
T 1imj_A 66 AIDLPGLGHSKEAA--APAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD--- 140 (210)
T ss_dssp EECCTTSGGGTTSC--CSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG---
T ss_pred EecCCCCCCCCCCC--CcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccc---
Confidence 99999999998765 245666666 99999999999899999999999999999999999999999999976210
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
.
T Consensus 141 ------~------------------------------------------------------------------------- 141 (210)
T 1imj_A 141 ------K------------------------------------------------------------------------- 141 (210)
T ss_dssp ------G-------------------------------------------------------------------------
T ss_pred ------c-------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.....+.++++|+++++|++|. ++.+..+.+ +.+ ++.+++++++ ||+.+.++++++.+.|.+||++.
T Consensus 142 ----~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 142 ----INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp ----SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS-SSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred ----ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC-CCCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 0013446678999999999999 999999999 765 8899999998 99999999999999999999864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=217.20 Aligned_cols=241 Identities=15% Similarity=0.196 Sum_probs=169.3
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+.+.+.+|.+++|.. | ++|+|||+||++++...|..+++.|.+ +||.|+++|+||
T Consensus 22 ~~~~~~~~g~~~~~~~-g-~~~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~G 77 (270)
T 3rm3_A 22 SEQYPVLSGAEPFYAE-N-GPVGVLLVHGFTGTPHSMRPLAEAYAK----------------------AGYTVCLPRLKG 77 (270)
T ss_dssp CCSSCCCTTCCCEEEC-C-SSEEEEEECCTTCCGGGTHHHHHHHHH----------------------TTCEEEECCCTT
T ss_pred CCCccCCCCCcccccC-C-CCeEEEEECCCCCChhHHHHHHHHHHH----------------------CCCEEEEeCCCC
Confidence 4567788999999985 3 347899999999999999999999998 699999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
+|.|.... ..++++++++|+.++++.+. .++++++||||||.+++.+|..+|+ |+++|++++... ...
T Consensus 78 ~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~-------~~~ 147 (270)
T 3rm3_A 78 HGTHYEDM--ERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVD-------IPA 147 (270)
T ss_dssp CSSCHHHH--HTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSC-------CHH
T ss_pred CCCCcccc--ccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceec-------ccc
Confidence 99997533 35688999999999999997 7899999999999999999999999 999999998631 100
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
.. ........................... .............+.. ...+.
T Consensus 148 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------------------~~~~~ 197 (270)
T 3rm3_A 148 --IA---AGMTGGGELPRYLDSIGSDLKNPDVKE-LAYEKTPTASLLQLAR------------------------LMAQT 197 (270)
T ss_dssp --HH---HHSCC---CCSEEECCCCCCSCTTCCC-CCCSEEEHHHHHHHHH------------------------HHHHH
T ss_pred --cc---cchhcchhHHHHHHHhCccccccchHh-hcccccChhHHHHHHH------------------------HHHHH
Confidence 00 000000000000000000000000000 0000000000000000 01233
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC--ceEEEcCC-CccccccCh-HHHHHHHHHHHHhc
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV--ARMIDLPG-GHLVSHERT-EEVNQALIDLIKAS 321 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~g-gH~~~~~~p-~~~~~~i~~fl~~~ 321 (351)
...+.++++|+|+++|++|.+++++..+.+.+.+ ++ ++++++++ ||+++.+.+ +++.+.|.+||++.
T Consensus 198 ~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 198 KAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI-SSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp HHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHS-CCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred HhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhc-CCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 4567888999999999999999999999999987 54 48999997 999999986 89999999999864
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=213.58 Aligned_cols=230 Identities=18% Similarity=0.202 Sum_probs=158.4
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
.++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|.... ..++++++
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~--~~~~~~~~ 72 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFFPLAKALAP-----------------------AVEVLAVQYPGRQDRRHEP--PVDSIGGL 72 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGHHHHHHHTT-----------------------TEEEEEECCTTSGGGTTSC--CCCSHHHH
T ss_pred CCCceEEEeCCCCCCchhHHHHHHHhcc-----------------------CcEEEEecCCCCCCCCCCC--CCcCHHHH
Confidence 4567899999999999999999999987 7999999999999998655 36789999
Q ss_pred HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc----cceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
++++.++++.++.++++|+||||||.+|+.+|..+|++ +.++|++++..+...................+......
T Consensus 73 ~~~~~~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
T 3fla_A 73 TNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGS 152 (267)
T ss_dssp HHHHHHHTGGGTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCc
Confidence 99999999999889999999999999999999999986 99999998765332221111111111111111000000
Q ss_pred HHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
.... ... ..........+.. ........... ....+++|+++|+|
T Consensus 153 -----------~~~~----~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~~-----~~~~~~~P~l~i~g 197 (267)
T 3fla_A 153 -----------DAAM----LAD----PELLAMVLPAIRS-----------DYRAVETYRHE-----PGRRVDCPVTVFTG 197 (267)
T ss_dssp -----------HHHH----HHS----HHHHHHHHHHHHH-----------HHHHHHHCCCC-----TTCCBSSCEEEEEE
T ss_pred -----------chhh----ccC----HHHHHHHHHHHHH-----------HHHhhhccccc-----ccCcCCCCEEEEec
Confidence 0000 000 0000000000000 00000000000 01568899999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhcCC
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
++|.+++++..+.+.+.+..+++++++++||+.+.++|+++.+.|.+||++...
T Consensus 198 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 198 DHDPRVSVGEARAWEEHTTGPADLRVLPGGHFFLVDQAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp TTCTTCCHHHHHGGGGGBSSCEEEEEESSSTTHHHHTHHHHHHHHHHHTC----
T ss_pred CCCCCCCHHHHHHHHHhcCCCceEEEecCCceeeccCHHHHHHHHHHHhccccc
Confidence 999999999999999877334899999999999999999999999999987654
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=221.43 Aligned_cols=134 Identities=18% Similarity=0.235 Sum_probs=111.7
Q ss_pred CCccccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 15 APDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
.+...++++|.+|+|...++ +.++|||+||++++...|..+++.|.+.-.. ......+|+|+++
T Consensus 68 ~~~~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~-------------~~~~~~~~~vi~~ 134 (388)
T 4i19_A 68 YPQFTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAH-------------GGDPADAFHLVIP 134 (388)
T ss_dssp SCEEEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGG-------------TSCGGGCEEEEEE
T ss_pred CCcEEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccc-------------cCCCCCCeEEEEE
Confidence 44556688999999987742 3467999999999999999999999871000 0000018999999
Q ss_pred cCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
|+||||.|+.+.. ..++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 135 dl~G~G~S~~~~~-~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 135 SLPGFGLSGPLKS-AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp CCTTSGGGCCCSS-CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred cCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 9999999987764 367999999999999999999999999999999999999999999999999999754
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-28 Score=215.98 Aligned_cols=274 Identities=17% Similarity=0.194 Sum_probs=165.2
Q ss_pred cccccCCeEEEEEEc--CC-------CCCeEEEEecCCCCccchHHHHH------HhcCCCCCCCCchhhhcccccCCCC
Q 018750 18 AALNDNGIKIFYRTY--GR-------GPTKVILITGLAGTHDAWGPQLK------GLAGTDKPNDDDETILQDSVESGDG 82 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~--g~-------~~p~vv~~HG~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (351)
.+.+.+|..++|... +. +.|+|||+||++++...|..+.. .|.+
T Consensus 31 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~--------------------- 89 (377)
T 1k8q_A 31 EVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILAD--------------------- 89 (377)
T ss_dssp EEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHH---------------------
T ss_pred EeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHH---------------------
Confidence 455668999988776 22 45689999999999988876655 7776
Q ss_pred CCCeEEEEecCCCCCCCCCC-----CCC--CccchHhHHH-HHHHHHH----HhCCcceEEEEEchhhHHHHHHHHhCCc
Q 018750 83 GAGIEVCAFDNRGMGRSSVP-----VKK--TEYTTKIMAK-DVIALMD----HLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 83 ~~g~~vi~~D~~G~G~S~~~-----~~~--~~~~~~~~~~-dl~~~l~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
+||+|+++|+||||.|... ... ..++++++++ |+.++++ .++.++++++||||||.+++.+|.++|+
T Consensus 90 -~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 168 (377)
T 1k8q_A 90 -AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPK 168 (377)
T ss_dssp -TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHH
T ss_pred -CCCCEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCch
Confidence 6999999999999999863 210 1578888888 8777655 5688899999999999999999999998
Q ss_pred ---ccceEEEeccCCCCCCCCCccchhhhH-----HHHhhcc-----cCCHHHHhh--cCccccccHHHHH----HhhcC
Q 018750 151 ---RVLSLALLNVTGGGFQCCPKLDLQTLS-----IAIRFFR-----AKTPEKRAA--VDLDTHYSQEYLE----EYVGS 211 (351)
Q Consensus 151 ---~v~~lvl~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~----~~~~~ 211 (351)
+|+++|++++........... .... .....+. ......... ............. ...+.
T Consensus 169 ~~~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (377)
T 1k8q_A 169 LAKRIKTFYALAPVATVKYTETLI--NKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGF 246 (377)
T ss_dssp HHTTEEEEEEESCCSCCSSCCSGG--GGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCC
T ss_pred hhhhhhEEEEeCCchhcccchhHH--HHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCC
Confidence 899999999864321111111 0000 0000000 000000000 0000000000000 00000
Q ss_pred C--chhhhhHHH----------------HHhhhhhccCCCCCCcch---hhhhhhcccCCHHHHHHhhccCccEEEEeec
Q 018750 212 S--TRRAILYQE----------------YVKGISATGMQSNYGFDG---QIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (351)
Q Consensus 212 ~--~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 270 (351)
. ......... +......... ..+.+.. .... +. ........+.++++|+|+|+|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~l~~i~~P~lii~G~ 322 (377)
T 1k8q_A 247 DTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKF-QAFDWGSPVQNMMH-YH--QSMPPYYNLTDMHVPIAVWNGG 322 (377)
T ss_dssp CGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSC-BCCCCSSHHHHHHH-HS--SSSCCBCCGGGCCSCEEEEEET
T ss_pred CcccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCe-eeccCCcchhhHHH-cC--CCCCcccCHhhCCCCEEEEEeC
Confidence 0 000000111 1110000000 0000000 0000 00 0000012368889999999999
Q ss_pred CCccCCHHHHHHHHHHhCCCce-EEEcCC-Cccccc---cChHHHHHHHHHHHHh
Q 018750 271 HDVIAQICYARRLAEKLYPVAR-MIDLPG-GHLVSH---ERTEEVNQALIDLIKA 320 (351)
Q Consensus 271 ~D~~~~~~~~~~~~~~~~~~~~-~~~~~g-gH~~~~---~~p~~~~~~i~~fl~~ 320 (351)
+|.++|++.++.+.+.+ ++.+ ++++++ ||+.++ ++|+++.+.|.+||++
T Consensus 323 ~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 323 NDLLADPHDVDLLLSKL-PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TCSSSCHHHHHHHHTTC-TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred CCcccCHHHHHHHHHhC-cCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 99999999999999986 7776 899998 999986 8999999999999975
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=219.21 Aligned_cols=236 Identities=14% Similarity=0.092 Sum_probs=153.9
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCC--CeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA--GIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
++|+|||+||++++...|..+.+.|.+ + ||+|+++|+||||.|..+. .+++++
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~----------------------~~~g~~vi~~D~~G~G~s~~~~---~~~~~~ 89 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINE----------------------THPGTVVTVLDLFDGRESLRPL---WEQVQG 89 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHH----------------------HSTTCCEEECCSSCSGGGGSCH---HHHHHH
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHh----------------------cCCCcEEEEeccCCCccchhhH---HHHHHH
Confidence 345699999999999999999999987 5 7999999999999987553 468899
Q ss_pred HHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
+++++.++++.+ .++++++||||||.+|+.+|.++|+ +|+++|+++++..+....+ .. .............
T Consensus 90 ~~~~l~~~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~----~~---~~~~~~~~~~~~~ 161 (302)
T 1pja_A 90 FREAVVPIMAKA-PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDT----DY---LKWLFPTSMRSNL 161 (302)
T ss_dssp HHHHHHHHHHHC-TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCC----HH---HHHHCTTCCHHHH
T ss_pred HHHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccc----hh---hhhHHHHHHHHHH
Confidence 999999999888 6899999999999999999999999 7999999998753321110 00 0001111000000
Q ss_pred hhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecC
Q 018750 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 271 (351)
................++..... ...+... ..+...+..........+..+.+.+++ |+++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~ 227 (302)
T 1pja_A 162 YRICYSPWGQEFSICNYWHDPHH----DDLYLNA---------SSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPD 227 (302)
T ss_dssp HHHHTSTTGGGSTGGGGBCCTTC----HHHHHHH---------CSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTT
T ss_pred hhccchHHHHHhhhhhcccChhh----hhhhhcc---------chHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCC
Confidence 00000000000000000000000 0000000 000000100000001122456788999 999999999
Q ss_pred CccCCHHHHHHHHHHhCCC---------------------------ceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 272 DVIAQICYARRLAEKLYPV---------------------------ARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 272 D~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
|.+++++.++.+.+.. ++ ++++++++ ||+++.|+|+++++.|.+||
T Consensus 228 D~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 228 DGVITPWQSSFFGFYD-ANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp CSSSSSGGGGGTCEEC-TTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred CCccchhHhhHhhhcC-CcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 9999988877775532 44 89999999 99999999999999999987
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=206.13 Aligned_cols=222 Identities=14% Similarity=0.163 Sum_probs=156.6
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc-chHhH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY-TTKIM 113 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~~~ 113 (351)
++|+|||+||++++...|..+.+.|.+ +||+|+++|+||||.|+.... ... +++++
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g~s~~~~~-~~~~~~~~~ 77 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQR----------------------SGYGVYVPLFSGHGTVEPLDI-LTKGNPDIW 77 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEECCCTTCSSSCTHHH-HHHCCHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHH----------------------CCCEEEecCCCCCCCCChhhh-cCcccHHHH
Confidence 456899999999999999999999997 699999999999999965432 223 78888
Q ss_pred HHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 114 AKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 114 ~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
++|+.++++.+... +++++||||||.+++.+|.++|+++++++++++..... .........+.
T Consensus 78 ~~d~~~~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~-------~~~~~~~~~~~-------- 142 (251)
T 3dkr_A 78 WAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGK-------HHLVPGFLKYA-------- 142 (251)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTC-------BCHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhcCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhcc-------chhhHHHHHHH--------
Confidence 99999998888654 99999999999999999999999999999988764211 11111000000
Q ss_pred hhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecC
Q 018750 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 271 (351)
. .+....................+. .+. .........+.++++|+|+++|++
T Consensus 143 ----------~-~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-----~~~~~~~~~~~~~~~P~l~i~g~~ 194 (251)
T 3dkr_A 143 ----------E-YMNRLAGKSDESTQILAYLPGQLA------------AID-----QFATTVAADLNLVKQPTFIGQAGQ 194 (251)
T ss_dssp ----------H-HHHHHHTCCCCHHHHHHHHHHHHH------------HHH-----HHHHHHHHTGGGCCSCEEEEEETT
T ss_pred ----------H-HHHhhcccCcchhhHHhhhHHHHH------------HHH-----HHHHHHhccccccCCCEEEEecCC
Confidence 0 000000000000000000000000 000 001123456788899999999999
Q ss_pred CccCCHHHHHHHHHHhCC--CceEEEcCC-CccccccC-hHHHHHHHHHHHHhcC
Q 018750 272 DVIAQICYARRLAEKLYP--VARMIDLPG-GHLVSHER-TEEVNQALIDLIKASE 322 (351)
Q Consensus 272 D~~~~~~~~~~~~~~~~~--~~~~~~~~g-gH~~~~~~-p~~~~~~i~~fl~~~~ 322 (351)
|.+++++.++.+.+.+.. +.+++++++ ||..+.+. ++++.+.|.+||++..
T Consensus 195 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 195 DELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp CSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred CcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 999999999999998744 458999998 99998885 9999999999998764
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=218.90 Aligned_cols=130 Identities=18% Similarity=0.207 Sum_probs=107.0
Q ss_pred CCCccccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 14 AAPDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 14 ~~~~~~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
..+...++++|.+|+|...++ +.++|||+||++++...|..+++.|.+..++. ..||+|++
T Consensus 84 ~~~~~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~----------------~~gf~vv~ 147 (408)
T 3g02_A 84 SFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPE----------------TLPFHLVV 147 (408)
T ss_dssp TSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTT----------------TCCEEEEE
T ss_pred cCCCEEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccc----------------cCceEEEE
Confidence 345556778999999999875 45679999999999999999999998621110 13899999
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCc-ceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~-~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+|+||||.|+.+.....++++++++++.++++.++.+ +++++||||||.+++.+|.++|+ +.++++..+
T Consensus 148 ~DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~-~~~~~l~~~ 217 (408)
T 3g02_A 148 PSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNFC 217 (408)
T ss_dssp ECCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCC
T ss_pred ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCC-ceEEEEeCC
Confidence 9999999999876335789999999999999999997 99999999999999999999976 455544433
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-29 Score=213.10 Aligned_cols=215 Identities=15% Similarity=0.094 Sum_probs=149.3
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
|+|||+||++++...|..++..|.+ ||+|+++|+||||.|.... ..+++++++++
T Consensus 52 ~~lvllHG~~~~~~~~~~l~~~L~~-----------------------~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~ 106 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRGWQERLGD-----------------------EVAVVPVQLPGRGLRLRER--PYDTMEPLAEA 106 (280)
T ss_dssp EEEEEECCTTCCGGGGTTHHHHHCT-----------------------TEEEEECCCTTSGGGTTSC--CCCSHHHHHHH
T ss_pred ceEEEECCCCCChHHHHHHHHhcCC-----------------------CceEEEEeCCCCCCCCCCC--CCCCHHHHHHH
Confidence 6799999999999999999999997 9999999999999997654 46789999999
Q ss_pred HHHHHHHh-CCcceEEEEEchhhHHHHHHHHhCCcccc----eEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 117 VIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVL----SLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 117 l~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~----~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
+.++++.+ +.++++|+||||||.+|+.+|.++|+++. .+++.++..+.................
T Consensus 107 ~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~----------- 175 (280)
T 3qmv_A 107 VADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALR----------- 175 (280)
T ss_dssp HHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHH-----------
T ss_pred HHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHH-----------
Confidence 99999999 77899999999999999999999998877 777777653221110000000000000
Q ss_pred hhcCccccccHHHHHHhhcCCc-------hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccE
Q 018750 192 AAVDLDTHYSQEYLEEYVGSST-------RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (351)
..+........ ........+...+. .... .. ...+..+++|+
T Consensus 176 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~---~~~~~~i~~P~ 224 (280)
T 3qmv_A 176 -----------EVIRDLGGLDDADTLGAAYFDRRLPVLRADLR---------------ACER--YD---WHPRPPLDCPT 224 (280)
T ss_dssp -----------HHHHHHTCCC---------CCTTHHHHHHHHH---------------HHHT--CC---CCCCCCBCSCE
T ss_pred -----------HHHHHhCCCChhhhcCHHHHHHHHHHHHHHHH---------------HHHh--cc---ccCCCceecCe
Confidence 00000000000 00000000000000 0000 00 01135788999
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccc--cChHHHHHHHHHHH
Q 018750 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH--ERTEEVNQALIDLI 318 (351)
Q Consensus 265 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~--~~p~~~~~~i~~fl 318 (351)
|+|+|++|.+++++..+.+.+.+....+++++++||+.++ ++++++++.|.+||
T Consensus 225 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 225 TAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEEEETTGGGSSHHHHHHHHHHHTTC
T ss_pred EEEEecCCCCcChHHHHHHHHhcCCceEEEEecCCCeEEcCchhHHHHHHHHHhhC
Confidence 9999999999999999998887644467888888999999 89999999998875
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=194.91 Aligned_cols=213 Identities=17% Similarity=0.121 Sum_probs=157.7
Q ss_pred cccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
...+.+|.++.+...+.+.|+||++||++++...|..+...|.+ +||.|+++|+||+|
T Consensus 6 ~~~~~~g~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g 63 (238)
T 1ufo_A 6 ERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAE----------------------RGFLLLAFDAPRHG 63 (238)
T ss_dssp EEEEETTEEEEEEEESSCCEEEEEECCTTCCHHHHHHTSTTTGG----------------------GTEEEEECCCTTST
T ss_pred cccccCCEEEEEEecCCCccEEEEECCCcccchHHHHHHHHHHh----------------------CCCEEEEecCCCCc
Confidence 35677888886554444678899999999999988888887776 69999999999999
Q ss_pred CCCCCCCCCc---------cchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 98 RSSVPVKKTE---------YTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 98 ~S~~~~~~~~---------~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
.|........ .++++.++|+.++++.+ +.++++++|||+||.+++.++..+|+.+.+++++++.....
T Consensus 64 ~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~ 143 (238)
T 1ufo_A 64 EREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK 143 (238)
T ss_dssp TSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCC
T ss_pred cCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccch
Confidence 9976543121 14667788888877765 44789999999999999999999999999999888753211
Q ss_pred CCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
. .... + ..... ... ....
T Consensus 144 ~-----~~~~-------~---------------~~~~~---------------~~~-~~~~------------------- 161 (238)
T 1ufo_A 144 L-----PQGQ-------V---------------VEDPG---------------VLA-LYQA------------------- 161 (238)
T ss_dssp C-----CTTC-------C---------------CCCHH---------------HHH-HHHS-------------------
T ss_pred h-----hhhh-------c---------------cCCcc---------------cch-hhcC-------------------
Confidence 0 0000 0 00000 000 0000
Q ss_pred cccCCHHHHHHhhcc-CccEEEEeecCCccCCHHHHHHHHHHhCC-----CceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 246 MHKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
+....+.++ ++|+++++|++|.++|.+.++.+.+.+.+ +.+++++++ ||..+.+.++++.+.|.+||
T Consensus 162 ------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l 235 (238)
T 1ufo_A 162 ------PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWL 235 (238)
T ss_dssp ------CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHH
T ss_pred ------ChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHH
Confidence 011234556 79999999999999999999999998731 789999998 99999999999999998888
Q ss_pred Hh
Q 018750 319 KA 320 (351)
Q Consensus 319 ~~ 320 (351)
+.
T Consensus 236 ~~ 237 (238)
T 1ufo_A 236 EA 237 (238)
T ss_dssp HC
T ss_pred hc
Confidence 64
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=201.35 Aligned_cols=221 Identities=19% Similarity=0.149 Sum_probs=164.0
Q ss_pred ccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
.+..+|.++.+..+++ ..|+||++||++++...|..+...|.+ +||.|+++|+||+|
T Consensus 10 ~~~~~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~G~g 67 (290)
T 3ksr_A 10 EIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVG----------------------LGCICMTFDLRGHE 67 (290)
T ss_dssp EEEETTEEEEEEEEEEESEEEEEEECCTTCCTTTTHHHHHHHHT----------------------TTCEEECCCCTTSG
T ss_pred EecCCCeEEEEEEecCCCCcEEEEeCCCCCCcCcHHHHHHHHHH----------------------CCCEEEEeecCCCC
Confidence 4556889998887775 667899999999999999999999998 79999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhC------CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
.|.... ..++..++++|+.++++.+. .++++++||||||.+++.++..+| +++++++++........
T Consensus 68 ~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~--- 140 (290)
T 3ksr_A 68 GYASMR--QSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW--- 140 (290)
T ss_dssp GGGGGT--TTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT---
T ss_pred CCCCCc--ccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh---
Confidence 998654 46788999999999999883 247999999999999999999988 88999998763211100
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
. ........ ......+.... ......
T Consensus 141 ~---------------------------~~~~~~~~--------~~~~~~~~~~~-------------------~~~~~~ 166 (290)
T 3ksr_A 141 D---------------------------QPKVSLNA--------DPDLMDYRRRA-------------------LAPGDN 166 (290)
T ss_dssp T---------------------------SBHHHHHH--------STTHHHHTTSC-------------------CCGGGC
T ss_pred h---------------------------cccccccC--------Chhhhhhhhhh-------------------hhhccc
Confidence 0 00000000 00000000000 000112
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC--CceEEEcCC-Ccccccc-ChHHHHHHHHHHHHhcC
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP--VARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASE 322 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl~~~~ 322 (351)
.....+.++++|+|+|+|++|.+++++..+.+.+.+.. +.+++++++ ||.+..+ .++++.+.|.+||++..
T Consensus 167 ~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 167 LALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMV 241 (290)
T ss_dssp HHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHh
Confidence 33456778899999999999999999999999998722 256899998 9987654 88999999999998754
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=209.58 Aligned_cols=120 Identities=16% Similarity=0.182 Sum_probs=100.2
Q ss_pred ccCCeEEEEEEcCC-CCCeEEEEecCCCCccchH----------------HHHHHhcCCCCCCCCchhhhcccccCCCCC
Q 018750 21 NDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWG----------------PQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (351)
Q Consensus 21 ~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~----------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (351)
..++..+.|...+. +.|+||++||++++...|. .+...|.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~---------------------- 91 (354)
T 2rau_A 34 PYDIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLAR---------------------- 91 (354)
T ss_dssp TTCEEEEEEEEETTCCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHH----------------------
T ss_pred CCCceEEEeecccCCCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHh----------------------
Confidence 45678888877644 3468999999999987544 78888887
Q ss_pred CCeEEEEecCCCCCCCCCCCCC-----CccchHhHHHHHHHHHHH----hCCcceEEEEEchhhHHHHHHHHhC-Ccccc
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMV-PERVL 153 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~ 153 (351)
+||+|+++|+||||.|...... ..++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++|+
T Consensus 92 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~ 171 (354)
T 2rau_A 92 NGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIK 171 (354)
T ss_dssp TTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEE
T ss_pred CCCEEEEecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccc
Confidence 6999999999999999865421 156788999999998887 4778999999999999999999999 99999
Q ss_pred eEEEeccCC
Q 018750 154 SLALLNVTG 162 (351)
Q Consensus 154 ~lvl~~~~~ 162 (351)
++|++++.+
T Consensus 172 ~lvl~~~~~ 180 (354)
T 2rau_A 172 GLILLDGGP 180 (354)
T ss_dssp EEEEESCSC
T ss_pred eEEEecccc
Confidence 999997654
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=196.41 Aligned_cols=189 Identities=16% Similarity=0.104 Sum_probs=146.7
Q ss_pred cccCCeEEEEEEcC--CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 20 LNDNGIKIFYRTYG--RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 20 ~~~~g~~l~y~~~g--~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
...+|..++|...+ ...|+|||+||++++...|..+...|.+ +||.|+++|+||+|
T Consensus 36 ~~~~~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g 93 (262)
T 1jfr_A 36 SGFGGGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLAS----------------------QGFVVFTIDTNTTL 93 (262)
T ss_dssp SSSCCEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHT----------------------TTCEEEEECCSSTT
T ss_pred cCCCceeEEecCCCCCCCCCEEEEeCCcCCCchhHHHHHHHHHh----------------------CCCEEEEeCCCCCC
Confidence 34467899998774 2347899999999999999999999987 69999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHH---HHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIA---LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~---~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
.+.... ..++...++.+.+ ++..++.++++++||||||.+++.++.++|+ ++++|++++...
T Consensus 94 ~~~~~~---~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~----------- 158 (262)
T 1jfr_A 94 DQPDSR---GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT----------- 158 (262)
T ss_dssp CCHHHH---HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----------
T ss_pred CCCchh---HHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-----------
Confidence 763210 1112222222222 1223455789999999999999999999997 999999986410
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
.
T Consensus 159 -------------------------------------------------------------------------------~ 159 (262)
T 1jfr_A 159 -------------------------------------------------------------------------------D 159 (262)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHhhccCccEEEEeecCCccCCHHH-HHHHHHHhCC--CceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLYP--VARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~--~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
..+.++++|+|+++|++|.+++.+. .+.+.+.+.. +.+++++++ ||..+.+.++++.+.|.+||++....
T Consensus 160 ~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~~ 233 (262)
T 1jfr_A 160 KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDS 233 (262)
T ss_dssp CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSC
T ss_pred ccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHhcC
Confidence 1235567999999999999999998 9999988732 358899998 99999999999999999999877544
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=184.06 Aligned_cols=188 Identities=14% Similarity=0.150 Sum_probs=142.0
Q ss_pred ccccCCeEEEEEEcCC----CCCeEEEEecC-----CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 19 ALNDNGIKIFYRTYGR----GPTKVILITGL-----AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~----~~p~vv~~HG~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
+.+.+| ++++....+ ..|+||++||+ ..+...|..+...|.+ +||.|+
T Consensus 11 ~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~g~~v~ 67 (208)
T 3trd_A 11 IQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDE----------------------LGLKTV 67 (208)
T ss_dssp EECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHH----------------------TTCEEE
T ss_pred EECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHH----------------------CCCEEE
Confidence 444567 888776653 34689999994 3334557888888987 699999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
++|+||+|.|...........+++.+.+..+.+.++.++++++||||||.+++.++ .+| +++++|++++...
T Consensus 68 ~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~------ 139 (208)
T 3trd_A 68 RFNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVF------ 139 (208)
T ss_dssp EECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTT------
T ss_pred EEecCCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccc------
Confidence 99999999998663322223344444444444444668999999999999999999 677 8999999998620
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
.+
T Consensus 140 ----------------------------------------------------------------~~-------------- 141 (208)
T 3trd_A 140 ----------------------------------------------------------------YE-------------- 141 (208)
T ss_dssp ----------------------------------------------------------------SG--------------
T ss_pred ----------------------------------------------------------------cC--------------
Confidence 00
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
....+..+++|+++++|++|.++|++..+.+.+.+..+.+++++++ ||+...+. +++.+.|.+||+
T Consensus 142 ---~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 142 ---GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp ---GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred ---CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 0012344578999999999999999999999998744599999998 99987664 899999999983
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=181.72 Aligned_cols=179 Identities=17% Similarity=0.215 Sum_probs=136.9
Q ss_pred CCCeEEEEecCCCC---ccchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCC-CeEEEEecCCCCCCCCCCCCCCccc
Q 018750 35 GPTKVILITGLAGT---HDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGA-GIEVCAFDNRGMGRSSVPVKKTEYT 109 (351)
Q Consensus 35 ~~p~vv~~HG~~~~---~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (351)
+.|+|||+||++++ ...|.. +...|.+ + ||+|+++|+||++.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~----------------------~~g~~vi~~d~~g~~~----------- 49 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEK----------------------IPGFQCLAKNMPDPIT----------- 49 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTT----------------------STTCCEEECCCSSTTT-----------
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhh----------------------ccCceEEEeeCCCCCc-----------
Confidence 35789999999998 466766 7788886 5 99999999998631
Q ss_pred hHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCH
Q 018750 110 TKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
.+..+++..+++.++. ++++|+||||||.+++.+|.++| |+++|++++..... .. ..
T Consensus 50 -~~~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~------~~-~~------------ 107 (194)
T 2qs9_A 50 -ARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDL------GD-EN------------ 107 (194)
T ss_dssp -CCHHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCT------TC-HH------------
T ss_pred -ccHHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCcccc------ch-hh------------
Confidence 1356778888888888 89999999999999999999998 99999999864210 00 00
Q ss_pred HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
.....++.. ......+..+.+|+++++
T Consensus 108 --------------~~~~~~~~~---------------------------------------~~~~~~~~~~~~p~lii~ 134 (194)
T 2qs9_A 108 --------------ERASGYFTR---------------------------------------PWQWEKIKANCPYIVQFG 134 (194)
T ss_dssp --------------HHHTSTTSS---------------------------------------CCCHHHHHHHCSEEEEEE
T ss_pred --------------hHHHhhhcc---------------------------------------cccHHHHHhhCCCEEEEE
Confidence 000000000 000123445668999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
|++|.++|++.++.+.+.+ +++++++++ ||+++.++|+++.+.+ +||++....
T Consensus 135 G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~~-~fl~~~~~~ 188 (194)
T 2qs9_A 135 STDDPFLPWKEQQEVADRL--ETKLHKFTDCGHFQNTEFHELITVVK-SLLKVPALE 188 (194)
T ss_dssp ETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTSCSSCCHHHHHHHH-HHHTCCCCC
T ss_pred eCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCccchhCHHHHHHHH-HHHHhhhhh
Confidence 9999999999999999987 789999998 9999999999988776 999876554
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=181.04 Aligned_cols=172 Identities=17% Similarity=0.172 Sum_probs=140.2
Q ss_pred CCCCCeEEEEecCCCCccchH--HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 33 GRGPTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
|+++|+||++||++++...|. .+.+.|.+ +||.|+++|+||+|.|.... ...++
T Consensus 1 g~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~g~g~s~~~~--~~~~~ 56 (176)
T 2qjw_A 1 GMSRGHCILAHGFESGPDALKVTALAEVAER----------------------LGWTHERPDFTDLDARRDLG--QLGDV 56 (176)
T ss_dssp CCSSCEEEEECCTTCCTTSHHHHHHHHHHHH----------------------TTCEEECCCCHHHHTCGGGC--TTCCH
T ss_pred CCCCcEEEEEeCCCCCccHHHHHHHHHHHHH----------------------CCCEEEEeCCCCCCCCCCCC--CCCCH
Confidence 456788999999999887655 88888887 69999999999999987443 34467
Q ss_pred HhHHHHHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 111 KIMAKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
.+.++++.+.++... .++++++||||||.+++.++.++| ++++|++++..... .
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~-------~---------------- 111 (176)
T 2qjw_A 57 RGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMG-------P---------------- 111 (176)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBT-------T----------------
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcc-------c----------------
Confidence 777787777777664 579999999999999999999998 99999999763110 0
Q ss_pred HHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
+. .+..+++|+++++|
T Consensus 112 ----------~~------------------------------------------------------~~~~~~~P~l~i~g 127 (176)
T 2qjw_A 112 ----------LP------------------------------------------------------ALDAAAVPISIVHA 127 (176)
T ss_dssp ----------BC------------------------------------------------------CCCCCSSCEEEEEE
T ss_pred ----------cC------------------------------------------------------cccccCCCEEEEEc
Confidence 00 03556789999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
++|.++|++..+.+.+.+ +++++++++||.. .++++++.+.|.+||++
T Consensus 128 ~~D~~~~~~~~~~~~~~~--~~~~~~~~~~H~~-~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 128 WHDELIPAADVIAWAQAR--SARLLLVDDGHRL-GAHVQAASRAFAELLQS 175 (176)
T ss_dssp TTCSSSCHHHHHHHHHHH--TCEEEEESSCTTC-TTCHHHHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHhC--CceEEEeCCCccc-cccHHHHHHHHHHHHHh
Confidence 999999999999999886 6788888449997 48999999999999975
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-26 Score=183.03 Aligned_cols=181 Identities=18% Similarity=0.267 Sum_probs=138.8
Q ss_pred CCCCCeEEEEecCCCCcc-chHHHHH-HhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 33 GRGPTKVILITGLAGTHD-AWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
|+++|+|||+||++++.. .|...+. .|.+ +||+|+++|+| .|.. .++
T Consensus 1 G~g~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~---~~~~------~~~ 49 (192)
T 1uxo_A 1 GRGTKQVYIIHGYRASSTNHWFPWLKKRLLA----------------------DGVQADILNMP---NPLQ------PRL 49 (192)
T ss_dssp ---CCEEEEECCTTCCTTSTTHHHHHHHHHH----------------------TTCEEEEECCS---CTTS------CCH
T ss_pred CCCCCEEEEEcCCCCCcchhHHHHHHHHHHh----------------------CCcEEEEecCC---CCCC------CCH
Confidence 356678999999999998 8888875 5855 59999999999 2221 168
Q ss_pred HhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc--ccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCH
Q 018750 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
+++++++.++++.+ .++++++||||||.+++.++.++|+ +|+++|++++........ .
T Consensus 50 ~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~-------------------~ 109 (192)
T 1uxo_A 50 EDWLDTLSLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL-------------------Q 109 (192)
T ss_dssp HHHHHHHHTTGGGC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC-------------------G
T ss_pred HHHHHHHHHHHHhc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccc-------------------h
Confidence 99999999999988 7899999999999999999999999 999999999863211000 0
Q ss_pred HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
. +..+.. ...+ ...+.++++|+++|+
T Consensus 110 ~---------------~~~~~~--------------------------------------~~~~-~~~~~~~~~P~l~i~ 135 (192)
T 1uxo_A 110 M---------------LDEFTQ--------------------------------------GSFD-HQKIIESAKHRAVIA 135 (192)
T ss_dssp G---------------GGGGTC--------------------------------------SCCC-HHHHHHHEEEEEEEE
T ss_pred h---------------hhhhhh--------------------------------------cCCC-HHHHHhhcCCEEEEe
Confidence 0 000000 0000 134566778999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccCh---HHHHHHHHHHHHh
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKA 320 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p---~~~~~~i~~fl~~ 320 (351)
|++|.++|++.++.+.+.+ +++++++++ ||+.+.+++ .++.+.|.+|+++
T Consensus 136 g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 136 SKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp ETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred cCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999976 889999998 999998876 4567888888865
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-25 Score=186.39 Aligned_cols=189 Identities=19% Similarity=0.196 Sum_probs=145.7
Q ss_pred cccCCeEEEEEEcC---CCCCeEEEEecCCCCcc-----chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 20 LNDNGIKIFYRTYG---RGPTKVILITGLAGTHD-----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 20 ~~~~g~~l~y~~~g---~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
+...+.++.+.... ++.|+||++||+++... .|..+...|++ +||.|+++
T Consensus 28 ~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 85 (249)
T 2i3d_A 28 FNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQK----------------------RGFTTLRF 85 (249)
T ss_dssp EEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHH----------------------TTCEEEEE
T ss_pred EECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHH----------------------CCCEEEEE
Confidence 34444477655443 35678999999854332 34778888887 69999999
Q ss_pred cCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC-----cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
|+||+|.|..... .+..++ +|+.++++.+.. ++++++||||||.+++.++..+|+ ++++|++++......
T Consensus 86 d~~g~G~s~~~~~---~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 160 (249)
T 2i3d_A 86 NFRSIGRSQGEFD---HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD 160 (249)
T ss_dssp CCTTSTTCCSCCC---SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC
T ss_pred CCCCCCCCCCCCC---CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh
Confidence 9999999976543 234444 777777766532 379999999999999999999998 999999998631000
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
T Consensus 161 -------------------------------------------------------------------------------- 160 (249)
T 2i3d_A 161 -------------------------------------------------------------------------------- 160 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC----CceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP----VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
...+.++++|+++++|++|.+++.+..+.+.+.+.. +.+++++++ ||... +.++++.+.|.+||++.
T Consensus 161 -------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~ 232 (249)
T 2i3d_A 161 -------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRR 232 (249)
T ss_dssp -------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHH
T ss_pred -------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHh
Confidence 012346779999999999999999999999998843 789999998 99987 89999999999999876
Q ss_pred CC
Q 018750 322 EK 323 (351)
Q Consensus 322 ~~ 323 (351)
..
T Consensus 233 l~ 234 (249)
T 2i3d_A 233 LN 234 (249)
T ss_dssp HT
T ss_pred cC
Confidence 54
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=197.09 Aligned_cols=193 Identities=18% Similarity=0.249 Sum_probs=149.8
Q ss_pred cccCCeEEEEEEcCC-CCCeEEEEecCCCCccchH-------HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWG-------PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
+..+...+.|...++ .+++|||+||++.+...|. .+...|.+ +||.|+++
T Consensus 45 ~~~~~~~~~~~~p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~----------------------~G~~V~~~ 102 (328)
T 1qlw_A 45 VTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLR----------------------KGYSTYVI 102 (328)
T ss_dssp EEESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHH----------------------TTCCEEEE
T ss_pred EEeeeEEEEEEccCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHHH----------------------CCCeEEEE
Confidence 344445555665543 4567999999999999898 48888887 69999999
Q ss_pred cCCCCCCCCCCCCCCc----------------------------cc----------------hHh---------------
Q 018750 92 DNRGMGRSSVPVKKTE----------------------------YT----------------TKI--------------- 112 (351)
Q Consensus 92 D~~G~G~S~~~~~~~~----------------------------~~----------------~~~--------------- 112 (351)
|+||||.|........ +. +++
T Consensus 103 D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (328)
T 1qlw_A 103 DQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPT 182 (328)
T ss_dssp ECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCS
T ss_pred CCCCcccCCCCCcccccccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCC
Confidence 9999999976532000 00 333
Q ss_pred ---HHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 113 ---MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 113 ---~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
+++++.++++.++ +++++||||||.+++.+|.++|++|+++|++++...
T Consensus 183 ~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-------------------------- 234 (328)
T 1qlw_A 183 PNPTVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-------------------------- 234 (328)
T ss_dssp SCHHHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC--------------------------
T ss_pred hhHHHHHHHHHHHHhC--CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC--------------------------
Confidence 7788888888886 899999999999999999999999999999997520
Q ss_pred HHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
. . . ....+.+++|+|+++|
T Consensus 235 ---------------------~---~-----------------------------------~--~~~~~~~~~PvLii~G 253 (328)
T 1qlw_A 235 ---------------------P---K-----------------------------------P--EDVKPLTSIPVLVVFG 253 (328)
T ss_dssp ---------------------C---C-----------------------------------G--GGCGGGTTSCEEEEEC
T ss_pred ---------------------C---C-----------------------------------H--HHHhhccCCCEEEEec
Confidence 0 0 0 0011234689999999
Q ss_pred cCCccCCH-----HHHHHHHHHhC---CCceEEEcCC-C-----ccccccC-hHHHHHHHHHHHHhcCC
Q 018750 270 RHDVIAQI-----CYARRLAEKLY---PVARMIDLPG-G-----HLVSHER-TEEVNQALIDLIKASEK 323 (351)
Q Consensus 270 ~~D~~~~~-----~~~~~~~~~~~---~~~~~~~~~g-g-----H~~~~~~-p~~~~~~i~~fl~~~~~ 323 (351)
++|.++|+ +.++.+.+.+. .+++++++++ | |+++.+. ++++.+.|.+||++...
T Consensus 254 ~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 254 DHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp SSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred cCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 99999996 88888888773 3789999994 5 9999998 99999999999988654
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=195.28 Aligned_cols=110 Identities=12% Similarity=0.113 Sum_probs=83.4
Q ss_pred eEEEEEEcC---CCCCeEEEEecCCCCccc---hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec----CC
Q 018750 25 IKIFYRTYG---RGPTKVILITGLAGTHDA---WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD----NR 94 (351)
Q Consensus 25 ~~l~y~~~g---~~~p~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D----~~ 94 (351)
..++|...| +++|+|||+||++++... |..+.+.|.. ||+|+++| +|
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~-----------------------g~~Vi~~Dl~~D~~ 80 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQG-----------------------DWAFVQVEVPSGKI 80 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTT-----------------------TCEEEEECCGGGBT
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHHC-----------------------CcEEEEEeccCCCC
Confidence 668888766 345789999999876543 5778888854 99999995 59
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHH--hCCcccceEEEeccCC
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA--MVPERVLSLALLNVTG 162 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~--~~p~~v~~lvl~~~~~ 162 (351)
|||.|+.. ...+++.+.+..+.+.++.++++|+||||||.+|+.+|. .+|++|+++|++++..
T Consensus 81 G~G~S~~~-----~~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~ 145 (335)
T 2q0x_A 81 GSGPQDHA-----HDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVC 145 (335)
T ss_dssp TSCSCCHH-----HHHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECC
T ss_pred CCCCcccc-----CcHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcc
Confidence 99998521 122333333333444478899999999999999999999 5799999999999763
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-26 Score=181.15 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=139.2
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe---EEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI---EVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~---~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
++|+|||+||++++...|..+.+.|.+ +|| +|+++|+||+|.|. ..+.+
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~~~~v~~~d~~g~g~s~------~~~~~ 53 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVS----------------------QGWSRDKLYAVDFWDKTGTN------YNNGP 53 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHH----------------------TTCCGGGEEECCCSCTTCCH------HHHHH
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHH----------------------cCCCCccEEEEecCCCCCch------hhhHH
Confidence 346799999999999999999999987 587 79999999999884 35788
Q ss_pred hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
++++++.++++.++.++++++||||||.+++.++.++ |++|+++|++++..... . .
T Consensus 54 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~-------~------------~--- 111 (181)
T 1isp_A 54 VLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLT-------T------------G--- 111 (181)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGT-------C------------S---
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccc-------c------------c---
Confidence 9999999999999989999999999999999999998 89999999999862100 0 0
Q ss_pred HHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
. .+. . .....++|+++|+|
T Consensus 112 --------~--------------------------~~~-----~----------------------~~~~~~~p~l~i~G 130 (181)
T 1isp_A 112 --------K--------------------------ALP-----G----------------------TDPNQKILYTSIYS 130 (181)
T ss_dssp --------B--------------------------CCC-----C----------------------SCTTCCCEEEEEEE
T ss_pred --------c--------------------------cCC-----C----------------------CCCccCCcEEEEec
Confidence 0 000 0 00113479999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
++|.++|++.+ .+ ++++++++++ ||+.+.+++ ++.+.|.+||++..
T Consensus 131 ~~D~~v~~~~~-----~~-~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 131 SADMIVMNYLS-----RL-DGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp TTCSSSCHHHH-----CC-BTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred CCCcccccccc-----cC-CCCcceeeccCchHhhccCH-HHHHHHHHHHhccC
Confidence 99999998743 24 7889999998 999999996 79999999998654
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=200.32 Aligned_cols=207 Identities=17% Similarity=0.188 Sum_probs=154.5
Q ss_pred CeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 24 g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
+..++|...+++.|+||++||++++...|..+.+.|.+ +||.|+++|+||+|.|...
T Consensus 84 ~~~~~~p~~~~~~p~vv~~HG~~~~~~~~~~~~~~la~----------------------~G~~vv~~d~~g~g~s~~~- 140 (306)
T 3vis_A 84 GGTIYYPRENNTYGAIAISPGYTGTQSSIAWLGERIAS----------------------HGFVVIAIDTNTTLDQPDS- 140 (306)
T ss_dssp CEEEEEESSCSCEEEEEEECCTTCCHHHHHHHHHHHHT----------------------TTEEEEEECCSSTTCCHHH-
T ss_pred ceEEEeeCCCCCCCEEEEeCCCcCCHHHHHHHHHHHHh----------------------CCCEEEEecCCCCCCCcch-
Confidence 45677766666667899999999999999999999998 7999999999999988422
Q ss_pred CCCccchHhHHHHHHHHHH--------HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 104 KKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~--------~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
..++..+.+..+.+ .++.++++++||||||.+++.++..+|+ ++++|++++...
T Consensus 141 -----~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------ 202 (306)
T 3vis_A 141 -----RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------ 202 (306)
T ss_dssp -----HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------
T ss_pred -----HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------
Confidence 12222222222222 2344689999999999999999999997 999999987521
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
..
T Consensus 203 ------------------------------------------------------------------------------~~ 204 (306)
T 3vis_A 203 ------------------------------------------------------------------------------NK 204 (306)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred HhhccCccEEEEeecCCccCCHH-HHHHHHHHhCC--CceEEEcCC-CccccccChHHHHHHHHHHHHhcCCCCCC--cc
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYP--VARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKISP--QD 329 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~--~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~~~~--~~ 329 (351)
.+.++++|+++++|++|.+++++ ..+.+.+.+.. ..+++++++ ||..+.+.++++.+.+.+||++....... +.
T Consensus 205 ~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l~~~~~~~~~ 284 (306)
T 3vis_A 205 SWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKRFVDEDTRYTQF 284 (306)
T ss_dssp CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCCGGGHHH
T ss_pred ccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHHHccCccccccc
Confidence 23556789999999999999998 58899988744 577899998 99999999999999999999887543221 11
Q ss_pred ccccCcccchhhhccccccc
Q 018750 330 WTNLPQTSSVLCQGFWRKGC 349 (351)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~ 349 (351)
..+.|+.......+.|+.+|
T Consensus 285 ~~~~p~~~~~~~~~~~~~~~ 304 (306)
T 3vis_A 285 LCPGPRTGLLSDVEEYRSTC 304 (306)
T ss_dssp HSSCSCC--CCSEEEEEECT
T ss_pred cCCCCCccccccchhhhccC
Confidence 12223322223667777777
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=187.44 Aligned_cols=251 Identities=12% Similarity=0.093 Sum_probs=154.7
Q ss_pred cccccCCeEEEEEEcCC----CCCeEEEEecCC---CCccchH-HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 18 AALNDNGIKIFYRTYGR----GPTKVILITGLA---GTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~----~~p~vv~~HG~~---~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.+.+.+|.++++..+.+ +.|+||++||++ ++...|. .+.+.|.+ +|+|+
T Consensus 7 ~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~ 63 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTE-----------------------HYDLI 63 (275)
T ss_dssp EEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTT-----------------------TEEEE
T ss_pred EEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHh-----------------------CceEE
Confidence 35567899999887642 456899999988 6666554 77788887 59999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
++|+||+|.+.. ....++..+.+..+.+.++.++++|+||||||.+++.+|.+ ++++++|++++......
T Consensus 64 ~~d~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~--- 133 (275)
T 3h04_A 64 QLSYRLLPEVSL-----DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT--- 133 (275)
T ss_dssp EECCCCTTTSCH-----HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS---
T ss_pred eeccccCCcccc-----chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc---
Confidence 999999987632 33566666667777777777899999999999999999998 78999999998642110
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhh---hhccCCCCCCcchhhhhhhc
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGI---SATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 246 (351)
............................... .................. .......... +.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 197 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPV--------VQDQIAQRFLIYVYARGTGKWINMINIADYT--------DS 197 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCC--------SSCSSGGGHHHHHHHHHHTCHHHHHCCSCTT--------SG
T ss_pred cccccccchhhcccccchHHHHhcccCCCCc--------CCCccccchhhhhhhhhcCchHHhhcccccc--------cc
Confidence 0000000000000000111111000000000 000000000000000000 0000000000 00
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccCh---HHHHHHHHHHHHhc
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKAS 321 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p---~~~~~~i~~fl~~~ 321 (351)
.. ......+.+++ |+|+++|++|.++|++.++.+.+.+ ++.+++++++ ||.++.+.+ +++.+.+.+||++.
T Consensus 198 ~~--~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 198 KY--NIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHV-PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp GG--SCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTC-SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred cc--ccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhc-CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHH
Confidence 00 01123456777 9999999999999999999999976 8889999998 999999988 69999999999864
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=192.04 Aligned_cols=230 Identities=16% Similarity=0.129 Sum_probs=154.4
Q ss_pred cccccCCeEEEEEEcC----CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 18 AALNDNGIKIFYRTYG----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g----~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.+...+|.++++.... ...|+||++||++++...|..+...+.. ||.|+++|+
T Consensus 86 ~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~~~-----------------------G~~v~~~D~ 142 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVAA-----------------------GFTVVAMDV 142 (346)
T ss_dssp EEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHHTT-----------------------TCEEEEECC
T ss_pred EEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHHhC-----------------------CcEEEEEcC
Confidence 3444578888877653 2347899999999999999888865554 999999999
Q ss_pred CCCCCCCCCCC------------------CCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCC
Q 018750 94 RGMGRSSVPVK------------------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 94 ~G~G~S~~~~~------------------~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
||+|.|..+.. ...+.+....+|+.++++.+ +.++++++|||+||.+|+.+|..+|
T Consensus 143 rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p 222 (346)
T 3fcy_A 143 RGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEP 222 (346)
T ss_dssp TTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHST
T ss_pred CCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCc
Confidence 99998876531 12344556677777766655 2368999999999999999999999
Q ss_pred cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhc
Q 018750 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT 229 (351)
Q Consensus 150 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (351)
+ |+++|+++|.... . ............ ......++.......... ......+
T Consensus 223 ~-v~~~vl~~p~~~~--------~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~--- 274 (346)
T 3fcy_A 223 R-VRKVVSEYPFLSD--------Y---KRVWDLDLAKNA---------YQEITDYFRLFDPRHERE----NEVFTKL--- 274 (346)
T ss_dssp T-CCEEEEESCSSCC--------H---HHHHHTTCCCGG---------GHHHHHHHHHHCTTCTTH----HHHHHHH---
T ss_pred c-ccEEEECCCcccC--------H---HHHhhccccccc---------hHHHHHHHHhcCCCcchH----HHHHHHh---
Confidence 7 9999999875211 0 000000000000 000000111000000000 0000000
Q ss_pred cCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChH
Q 018750 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~ 308 (351)
...+....+.++++|+|+++|++|.++|++.+..+.+.+..+++++++++ ||..+ +
T Consensus 275 -------------------~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~ 331 (346)
T 3fcy_A 275 -------------------GYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM----R 331 (346)
T ss_dssp -------------------GGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC----T
T ss_pred -------------------CcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH----H
Confidence 01133456788899999999999999999999999998755789999998 99987 6
Q ss_pred HHHHHHHHHHHhc
Q 018750 309 EVNQALIDLIKAS 321 (351)
Q Consensus 309 ~~~~~i~~fl~~~ 321 (351)
++.+.+.+||++.
T Consensus 332 ~~~~~i~~fl~~l 344 (346)
T 3fcy_A 332 GFGDLAMQFMLEL 344 (346)
T ss_dssp THHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 7788999999864
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=181.49 Aligned_cols=194 Identities=12% Similarity=0.084 Sum_probs=154.9
Q ss_pred ccccCCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 19 ALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+.+.+|.++.+....+ ..|+||++||++++...|..+...|++ +||.|+++|+||
T Consensus 8 ~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~g 65 (236)
T 1zi8_A 8 IQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLVD----------------------QGYAAVCPDLYA 65 (236)
T ss_dssp EECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHHH----------------------TTCEEEEECGGG
T ss_pred EecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHh----------------------CCcEEEeccccc
Confidence 4446788888776653 346899999999999999999999987 699999999999
Q ss_pred CCCCCCCCCC-------------CccchHhHHHHHHHHHHHhC-----CcceEEEEEchhhHHHHHHHHhCCcccceEEE
Q 018750 96 MGRSSVPVKK-------------TEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (351)
Q Consensus 96 ~G~S~~~~~~-------------~~~~~~~~~~dl~~~l~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl 157 (351)
+|.|...... ...+.++.++|+.++++.+. .++++++|||+||.+++.++..+| ++++++
T Consensus 66 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~ 143 (236)
T 1zi8_A 66 RQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVG 143 (236)
T ss_dssp GTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEE
T ss_pred cCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEE
Confidence 9988653211 13356778899999998886 468999999999999999999998 999998
Q ss_pred eccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCc
Q 018750 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (351)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (351)
+.+... .
T Consensus 144 ~~~~~~--------~----------------------------------------------------------------- 150 (236)
T 1zi8_A 144 YYGVGL--------E----------------------------------------------------------------- 150 (236)
T ss_dssp ESCSSG--------G-----------------------------------------------------------------
T ss_pred ecCccc--------c-----------------------------------------------------------------
Confidence 876410 0
Q ss_pred chhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC--CCceEEEcCC-CccccccCh-------
Q 018750 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY--PVARMIDLPG-GHLVSHERT------- 307 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~g-gH~~~~~~p------- 307 (351)
+....+.++++|+++++|++|.+++++..+.+.+.+. ++.+++++++ ||....+.+
T Consensus 151 --------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 216 (236)
T 1zi8_A 151 --------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASA 216 (236)
T ss_dssp --------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHH
T ss_pred --------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHH
Confidence 0012346678999999999999999999999998873 4789999997 998776543
Q ss_pred -HHHHHHHHHHHHhcCC
Q 018750 308 -EEVNQALIDLIKASEK 323 (351)
Q Consensus 308 -~~~~~~i~~fl~~~~~ 323 (351)
+++.+.+.+||++..+
T Consensus 217 ~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 217 AALANERTLDFLVPLQS 233 (236)
T ss_dssp HHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 6789999999987654
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=187.33 Aligned_cols=192 Identities=17% Similarity=0.152 Sum_probs=152.5
Q ss_pred ccccCCeEEEEEEcCC--CCCeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 19 ALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~--~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.++.+|.++.+..+.+ ..|+||++||++++... +..+.+.|.+ +||.|+++|+|
T Consensus 16 ~~~~~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~ 73 (223)
T 2o2g_A 16 SVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQ----------------------AGLATLLIDLL 73 (223)
T ss_dssp EEEETTEEEEEEEECCTTCCEEEEEECCTTCCTTCHHHHHHHHHHHH----------------------HTCEEEEECSS
T ss_pred EEecCCeEEEEEEecCCCCceEEEEecCCCCCCCccchHHHHHHHHH----------------------CCCEEEEEcCC
Confidence 4456899998877654 35789999999988875 4577888887 69999999999
Q ss_pred CCCCCCCCCC--CCccchHhHHHHHHHHHHHhCCc------ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 95 GMGRSSVPVK--KTEYTTKIMAKDVIALMDHLGWK------QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 95 G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~~~~------~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
|+|.|..... ...++++++++|+.++++.+..+ +++++|||+||.+++.++..+|++++++|++++..
T Consensus 74 g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~---- 149 (223)
T 2o2g_A 74 TQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRP---- 149 (223)
T ss_dssp CHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCG----
T ss_pred CcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCC----
Confidence 9998864321 01267889999999999887443 89999999999999999999999999999998741
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
...
T Consensus 150 ---~~~-------------------------------------------------------------------------- 152 (223)
T 2o2g_A 150 ---DLA-------------------------------------------------------------------------- 152 (223)
T ss_dssp ---GGC--------------------------------------------------------------------------
T ss_pred ---CcC--------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccccc-cChHHHHHHHHHHHHhc
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-ERTEEVNQALIDLIKAS 321 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~-~~p~~~~~~i~~fl~~~ 321 (351)
...+.++++|+++++|++|.++|.+..+.+.+ ..++.+++++++ ||.... +.++++.+.|.+||++.
T Consensus 153 -------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 153 -------PSALPHVKAPTLLIVGGYDLPVIAMNEDALEQ-LQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp -------TTTGGGCCSCEEEEEETTCHHHHHHHHHHHHH-CCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred -------HHHHhcCCCCEEEEEccccCCCCHHHHHHHHh-hCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 01245677999999999999998666555555 457899999998 998766 46799999999999864
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=180.14 Aligned_cols=176 Identities=13% Similarity=0.177 Sum_probs=137.7
Q ss_pred CeEEEEEEcCCCCCeEEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC
Q 018750 24 GIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (351)
Q Consensus 24 g~~l~y~~~g~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 102 (351)
|.+++|...|++ |+|||+||++++. ..|...+..+.. .+ +.+|.+|++
T Consensus 6 g~~l~~~~~g~~-~~vv~~HG~~~~~~~~~~~~~~~~~~----------------------~~---~~v~~~~~~----- 54 (191)
T 3bdv_A 6 EIDLRLTEVSQQ-LTMVLVPGLRDSDDEHWQSHWERRFP----------------------HW---QRIRQREWY----- 54 (191)
T ss_dssp HHHHHHHHHHTT-CEEEEECCTTCCCTTSHHHHHHHHCT----------------------TS---EECCCSCCS-----
T ss_pred cCccccCCCCCC-ceEEEECCCCCCchhhHHHHHHHhcC----------------------Ce---EEEeccCCC-----
Confidence 444555555544 5799999999988 678777765543 23 556777764
Q ss_pred CCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhh
Q 018750 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (351)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (351)
.++++++++++.++++.++ ++++++||||||.+++.++.++|++|+++|++++.... ..
T Consensus 55 ----~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~-------~~--------- 113 (191)
T 3bdv_A 55 ----QADLDRWVLAIRRELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPM-------RF--------- 113 (191)
T ss_dssp ----SCCHHHHHHHHHHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGG-------GG---------
T ss_pred ----CcCHHHHHHHHHHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccc-------cc---------
Confidence 3478999999999999988 89999999999999999999999999999999986310 00
Q ss_pred cccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCc
Q 018750 183 FRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (351)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (351)
.+ ... ..+.++++
T Consensus 114 ----------------~~---------~~~------------------------------------------~~~~~~~~ 126 (191)
T 3bdv_A 114 ----------------EI---------DDR------------------------------------------IQASPLSV 126 (191)
T ss_dssp ----------------TC---------TTT------------------------------------------SCSSCCSS
T ss_pred ----------------cC---------ccc------------------------------------------cccccCCC
Confidence 00 000 12456789
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccccc----cChHHHHHHHHHHHHhc
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH----ERTEEVNQALIDLIKAS 321 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~----~~p~~~~~~i~~fl~~~ 321 (351)
|+++++|++|.++|++.++.+.+.+ +++++++++ ||+.+. +.++.+ +.|.+||++.
T Consensus 127 P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 127 PTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp CEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred CEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 9999999999999999999999876 789999998 999988 445555 9999999876
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-24 Score=176.37 Aligned_cols=179 Identities=16% Similarity=0.152 Sum_probs=138.9
Q ss_pred CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC------------------
Q 018750 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR------------------ 94 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~------------------ 94 (351)
+++.|+||++||++++...|..+...|.+. .+||.|+++|+|
T Consensus 11 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~--------------------~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~ 70 (218)
T 1auo_A 11 KPADACVIWLHGLGADRYDFMPVAEALQES--------------------LLTTRFVLPQAPTRPVTINGGYEMPSWYDI 70 (218)
T ss_dssp SCCSEEEEEECCTTCCTTTTHHHHHHHHTT--------------------CTTEEEEECCCCEEEEGGGTTEEEECSSCE
T ss_pred CCCCcEEEEEecCCCChhhHHHHHHHHhhc--------------------CCceEEEeCCCCCccccCCCCCcccceecC
Confidence 456678999999999999999999999830 029999998766
Q ss_pred -CCCCCCCCCCCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHH-hCCcccceEEEeccCCCCCCC
Q 018750 95 -GMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAA-MVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 95 -G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~ 167 (351)
|+|.+... ...++++.++++.++++.+ +. ++++++|||+||.+++.++. ++|++++++|++++....
T Consensus 71 ~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--- 144 (218)
T 1auo_A 71 KAMSPARSI---SLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--- 144 (218)
T ss_dssp EECSSSCEE---CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT---
T ss_pred cCCCccccc---chHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC---
Confidence 44543211 3557888899999999887 44 48999999999999999999 999999999999986311
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
. . .. . .
T Consensus 145 ------~----------~----------~~-------------~----------------------~------------- 150 (218)
T 1auo_A 145 ------F----------G----------DE-------------L----------------------E------------- 150 (218)
T ss_dssp ------C----------C----------TT-------------C----------------------C-------------
T ss_pred ------c----------h----------hh-------------h----------------------h-------------
Confidence 0 0 00 0 0
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCCCccccccChHHHHHHHHHHH
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPGGHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~ggH~~~~~~p~~~~~~i~~fl 318 (351)
. ....+++|+++++|++|.++|++.++.+.+.+.. +.+++++++||..+.+.++++.+.|.++|
T Consensus 151 -~------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 151 -L------SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp -C------CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCCHHHHHHHHHHHHHHH
T ss_pred -h------hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEecCCCccCHHHHHHHHHHHHHHh
Confidence 0 0134568999999999999999999999988733 58888889899998888877777777665
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=180.97 Aligned_cols=179 Identities=17% Similarity=0.202 Sum_probs=137.7
Q ss_pred cCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe-------------------c
Q 018750 32 YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF-------------------D 92 (351)
Q Consensus 32 ~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~-------------------D 92 (351)
.+++.|+||++||++++...|..+...|.+ +||.|+++ |
T Consensus 19 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~~~~~~~~~~~~~~~~~~w~d 76 (232)
T 1fj2_A 19 ARKATAAVIFLHGLGDTGHGWAEAFAGIRS----------------------SHIKYICPHAPVRPVTLNMNVAMPSWFD 76 (232)
T ss_dssp SSCCSEEEEEECCSSSCHHHHHHHHHTTCC----------------------TTEEEEECCCCEEEEGGGTTEEEECSSC
T ss_pred CCCCCceEEEEecCCCccchHHHHHHHHhc----------------------CCcEEEecCCCccccccccccccccccc
Confidence 345667899999999999999999998886 69999998 6
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
++|+ .+.... ...++++.++++.++++.+ +. ++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 77 ~~g~-~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~ 153 (232)
T 1fj2_A 77 IIGL-SPDSQE--DESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS 153 (232)
T ss_dssp BCCC-STTCCB--CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG
T ss_pred cccC-Cccccc--ccHHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc
Confidence 6666 332222 3567899999999999987 55 79999999999999999999999999999999985311000
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
. .. .
T Consensus 154 ~-----------------------------------------~~---------------------~-------------- 157 (232)
T 1fj2_A 154 F-----------------------------------------PQ---------------------G-------------- 157 (232)
T ss_dssp S-----------------------------------------CS---------------------S--------------
T ss_pred c-----------------------------------------cc---------------------c--------------
Confidence 0 00 0
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-----CCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-----PVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
...+..+++|+++++|++|.+++.+.++.+.+.+. ++.+++++++ ||....+.. +.+.+||++.
T Consensus 158 ------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~----~~i~~~l~~~ 227 (232)
T 1fj2_A 158 ------PIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEM----MDVKQFIDKL 227 (232)
T ss_dssp ------CCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHH----HHHHHHHHHH
T ss_pred ------ccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHH----HHHHHHHHHh
Confidence 00234567899999999999999998888887763 4589999998 999854443 5666666654
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=195.62 Aligned_cols=249 Identities=9% Similarity=0.027 Sum_probs=152.0
Q ss_pred ccccCCeEEE--EEEcCCCC-CeEEEEecCCCCccchHHHHH-HhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 19 ALNDNGIKIF--YRTYGRGP-TKVILITGLAGTHDAWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 19 ~~~~~g~~l~--y~~~g~~~-p~vv~~HG~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+..+|..+. +...++++ |+||++||++++...|..... .+.. +||+|+++|+|
T Consensus 139 ~i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~----------------------~g~~vi~~D~~ 196 (405)
T 3fnb_A 139 EVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWE----------------------HDYNVLMVDLP 196 (405)
T ss_dssp EEEETTEEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHTHHHHHH----------------------TTCEEEEECCT
T ss_pred EEeECCeEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHh----------------------CCcEEEEEcCC
Confidence 3445677775 33334444 899999999999988866552 3333 49999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
|+|.|..... .+. .++.+|+.++++.+.. ++++|+||||||.+++.+|..+| +|+++|+++|.. ...
T Consensus 197 G~G~s~~~~~--~~~-~~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~-------~~~ 265 (405)
T 3fnb_A 197 GQGKNPNQGL--HFE-VDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIY-------DVA 265 (405)
T ss_dssp TSTTGGGGTC--CCC-SCTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCS-------CHH
T ss_pred CCcCCCCCCC--CCC-ccHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcC-------CHH
Confidence 9999964332 222 2557888888888876 79999999999999999999999 899999998763 111
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCC-chhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
.. .. ..+...... .... ...+....... .........+...+... .....+.........
T Consensus 266 ~~-~~---~~~~~~~~~-------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~- 326 (405)
T 3fnb_A 266 EV-FR---ISFSTALKA-------PKTI-LKWGSKLVTSVNKVAEVNLNKYAWQFGQV------DFITSVNEVLEQAQI- 326 (405)
T ss_dssp HH-HH---HHCC--------------------------CCCHHHHHHHHHHHHHHTSS------SHHHHHHHHHHHCCC-
T ss_pred HH-HH---HhhhhhhhC-------cHHH-HHHHHHHhhccchhHHHHHHHhhhhcCCC------CHHHHHHHHHHhhcc-
Confidence 10 00 000000000 0000 00000000000 00000011111000000 000000000000000
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEc---CC-CccccccChHHHHHHHHHHHHhcC
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL---PG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~---~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
..+.++++|+|+|+|++|.+++++.++.+.+.+ .++.+++++ ++ ||.++.++++++.+.|.+||++..
T Consensus 327 ---~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l 401 (405)
T 3fnb_A 327 ---VDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIF 401 (405)
T ss_dssp ---CCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHH
T ss_pred ---cCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHh
Confidence 016788999999999999999999999999887 346778888 55 688889999999999999998764
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-24 Score=185.51 Aligned_cols=219 Identities=12% Similarity=0.092 Sum_probs=146.6
Q ss_pred CCCCCeEEEEecC--CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 33 GRGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 33 g~~~p~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
+.+.|+|||+||+ +++...|..+...|.. +|+|+++|+||||.|+.. ..++
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L~~-----------------------~~~v~~~d~~G~G~~~~~----~~~~ 130 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEELDA-----------------------GRRVSALVPPGFHGGQAL----PATL 130 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHHCT-----------------------TSEEEEEECTTSSTTCCE----ESSH
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHhCC-----------------------CceEEEeeCCCCCCCCCC----CCCH
Confidence 3345679999995 6778899999999965 999999999999987544 3488
Q ss_pred HhHHHHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHhC---CcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC
Q 018750 111 KIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (351)
Q Consensus 111 ~~~~~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (351)
+++++++.++++.+ +.++++|+||||||.+|+.+|.++ |++|+++|++++...... ..........+..
T Consensus 131 ~~~~~~~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~------~~~~~~~~~~~~~- 203 (319)
T 3lcr_A 131 TVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGD------GGRPEELFRSALN- 203 (319)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSS------CCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCcc------chhhHHHHHHHHH-
Confidence 99999999888877 558999999999999999999988 888999999998743211 0001100000000
Q ss_pred CHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEE
Q 018750 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (351)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (351)
... .....+..... .......+...+.. ... . ....+++|+|+
T Consensus 204 --~~~-----------~~~~~~~~~~~-~~~~l~~~~~~~~~----------------~~~-~------~~~~i~~PvLl 246 (319)
T 3lcr_A 204 --ERF-----------VEYLRLTGGGN-LSQRITAQVWCLEL----------------LRG-W------RPEGLTAPTLY 246 (319)
T ss_dssp --HHH-----------HHHHHHHCCCC-HHHHHHHHHHHHHH----------------TTT-C------CCCCCSSCEEE
T ss_pred --HHH-----------hhhhcccCCCc-hhHHHHHHHHHHHH----------------Hhc-C------CCCCcCCCEEE
Confidence 000 00000000000 00000000000000 000 0 11568899999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCceEEEcCCCcccccc--ChHHHHHHHHHHHHhcCC
Q 018750 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHE--RTEEVNQALIDLIKASEK 323 (351)
Q Consensus 267 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~--~p~~~~~~i~~fl~~~~~ 323 (351)
|+|++| .+++.....+.+.+....++++++++|+.+++ +++++++.|.+||.+...
T Consensus 247 i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 247 VRPAQP-LVEQEKPEWRGDVLAAMGQVVEAPGDHFTIIEGEHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp EEESSC-SSSCCCTHHHHHHHHTCSEEEEESSCTTGGGSTTTHHHHHHHHHHHHHHHHC
T ss_pred EEeCCC-CCCcccchhhhhcCCCCceEEEeCCCcHHhhCcccHHHHHHHHHHHHHhccc
Confidence 999985 55556667777766556889999999988886 999999999999988654
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-25 Score=182.65 Aligned_cols=191 Identities=15% Similarity=0.104 Sum_probs=143.3
Q ss_pred CCccccccCCeEEEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe-
Q 018750 15 APDAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF- 91 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~- 91 (351)
..+.+++.+|.+++|...|+ +.|+||++||++++...|..+...|.+ ||.|+++
T Consensus 15 ~~e~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~~ 71 (226)
T 2h1i_A 15 TENLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVDS-----------------------EASVLSVR 71 (226)
T ss_dssp CCCHHHHHHSSSCEEEECCSCTTSCEEEEECCTTCCTTTTHHHHHHHHT-----------------------TSCEEEEC
T ss_pred ceeeeecCCCceeEEecCCCCCCCcEEEEEecCCCChhHHHHHHHHhcc-----------------------CceEEEec
Confidence 45667788999999999986 678999999999999999999999997 9999999
Q ss_pred -cCCCCCCCCCCCC--CCccchHhHHHH---HHHHH----HHh--CCcceEEEEEchhhHHHHHHHHhCCcccceEEEec
Q 018750 92 -DNRGMGRSSVPVK--KTEYTTKIMAKD---VIALM----DHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (351)
Q Consensus 92 -D~~G~G~S~~~~~--~~~~~~~~~~~d---l~~~l----~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (351)
|++|+|.|..... ...++..++.++ +.+++ +.. +.++++++||||||.+++.++..+|++++++|+++
T Consensus 72 ~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~ 151 (226)
T 2h1i_A 72 GNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHH 151 (226)
T ss_dssp CSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEES
T ss_pred CcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeC
Confidence 9999998753221 123344444444 33333 333 44789999999999999999999999999999999
Q ss_pred cCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcch
Q 018750 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (351)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
+...... .
T Consensus 152 ~~~~~~~---------------------------------------------------------~--------------- 159 (226)
T 2h1i_A 152 PMVPRRG---------------------------------------------------------M--------------- 159 (226)
T ss_dssp CCCSCSS---------------------------------------------------------C---------------
T ss_pred CCCCcCc---------------------------------------------------------c---------------
Confidence 8631100 0
Q ss_pred hhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCC-CccccccChHHHHHHHH
Q 018750 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
.....+++|+++++|++|.+++.+..+.+.+.+.. ..++ ++++ ||....+. .+.+.
T Consensus 160 ---------------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~----~~~~~ 219 (226)
T 2h1i_A 160 ---------------QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMGE----VEKAK 219 (226)
T ss_dssp ---------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHHH----HHHHH
T ss_pred ---------------ccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHH----HHHHH
Confidence 00122468999999999999999999999888732 3455 8888 99986544 45555
Q ss_pred HHHHh
Q 018750 316 DLIKA 320 (351)
Q Consensus 316 ~fl~~ 320 (351)
+||.+
T Consensus 220 ~~l~~ 224 (226)
T 2h1i_A 220 EWYDK 224 (226)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=182.96 Aligned_cols=217 Identities=19% Similarity=0.199 Sum_probs=129.9
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
.+++|||+||++++...|.++++.|.+ +|+|+++|+||||.|..+ ..+++.
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~GhG~S~~~------~~~~~~ 62 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQG-----------------------ECEMLAAEPPGHGTNQTS------AIEDLE 62 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCC-----------------------SCCCEEEECCSSCCSCCC------TTTHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCC-----------------------CeEEEEEeCCCCCCCCCC------CcCCHH
Confidence 445799999999999999999999987 899999999999999643 234455
Q ss_pred HHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHh------CCcccceEEEeccCCCCCCCCCccchhhhHHHHhhccc
Q 018750 115 KDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAM------VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (351)
Q Consensus 115 ~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (351)
+.+.++++.++. ++++|+||||||.+|+.+|.+ +|++ +++.+...+...... ............+..
T Consensus 63 ~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 138 (242)
T 2k2q_B 63 ELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKK-VSHLPDDQFLDHIIQ 138 (242)
T ss_dssp HHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCC-CSSCTTHHHHHTTCC
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCccc-ccCCCHHHHHHHHHH
Confidence 555555556665 689999999999999999987 4543 444332211110000 000000000000000
Q ss_pred CCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
.. ........ . ......+ ...+......... ... ..+.++++|+|
T Consensus 139 ----------~~-~~~~~~~~--------~----~~~~~~~-------~~~~~~~~~~~~~--~~~---~~l~~i~~P~l 183 (242)
T 2k2q_B 139 ----------LG-GMPAELVE--------N----KEVMSFF-------LPSFRSDYRALEQ--FEL---YDLAQIQSPVH 183 (242)
T ss_dssp ----------TT-CCCCTTTH--------H----HHTTTTC-------CSCHHHHHHHHTC--CCC---SCCTTCCCSEE
T ss_pred ----------hC-CCChHHhc--------C----HHHHHHH-------HHHHHHHHHHHHh--ccc---CCCCccCCCEE
Confidence 00 00000000 0 0000000 0000000000000 000 11567899999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+|+|++|.+++ ...+.+.+. .++.+++++++||+++.++|+++++.|.+||++.
T Consensus 184 vi~G~~D~~~~-~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 184 VFNGLDDKKCI-RDAEGWKKW-AKDITFHQFDGGHMFLLSQTEEVAERIFAILNQH 237 (242)
T ss_dssp EEEECSSCCHH-HHHHHHHTT-CCCSEEEEEECCCSHHHHHCHHHHHHHHHHHHTT
T ss_pred EEeeCCCCcCH-HHHHHHHHH-hcCCeEEEEeCCceeEcCCHHHHHHHHHHHhhcc
Confidence 99999999865 445555554 4777788888899999999999999999999864
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=188.44 Aligned_cols=227 Identities=16% Similarity=0.143 Sum_probs=157.2
Q ss_pred ccccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 19 ALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.++.+|.+|.+..+.+ +.|+||++||++++...|......|.+ +||.|+++|+|
T Consensus 131 ~~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~r 188 (386)
T 2jbw_A 131 ELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLD----------------------RGMATATFDGP 188 (386)
T ss_dssp EEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHH----------------------TTCEEEEECCT
T ss_pred EEEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHh----------------------CCCEEEEECCC
Confidence 3445899998776532 346899999999988876666777776 69999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHH---hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
|+|.|..... ...++++.+.++.+++.. ++.++++|+|||+||.+++.++.. |++++++|++ +........
T Consensus 189 G~G~s~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~--- 262 (386)
T 2jbw_A 189 GQGEMFEYKR-IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYW--- 262 (386)
T ss_dssp TSGGGTTTCC-SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTG---
T ss_pred CCCCCCCCCC-CCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHH---
Confidence 9999832221 456778888888888887 455789999999999999999999 8899999999 653211000
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
. .... ..........+.... ..........+
T Consensus 263 ~------------~~~~-----------~~~~~~~~~~g~~~~-~~~~~~~~~~~------------------------- 293 (386)
T 2jbw_A 263 D------------LETP-----------LTKESWKYVSKVDTL-EEARLHVHAAL------------------------- 293 (386)
T ss_dssp G------------GSCH-----------HHHHHHHHHTTCSSH-HHHHHHHHHHT-------------------------
T ss_pred H------------hccH-----------HHHHHHHHHhCCCCH-HHHHHHHHHhC-------------------------
Confidence 0 0000 000011111111100 00000000000
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh-CCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
+....+.++++|+|+++|++|. ++++.++.+.+.+ ..+.+++++++ ||.. .++++++.+.|.+||++....
T Consensus 294 ~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 294 ETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLVA 366 (386)
T ss_dssp CCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHTS
T ss_pred ChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHhcCC
Confidence 0112457788999999999999 9999999999987 44789999998 9965 678899999999999886543
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-23 Score=171.55 Aligned_cols=171 Identities=19% Similarity=0.247 Sum_probs=133.9
Q ss_pred CCeEEEEecCC---C--CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 36 PTKVILITGLA---G--THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 36 ~p~vv~~HG~~---~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
.|+||++||++ + ....|..+...|.+ +||.|+++|+||+|.|..... ..
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~g~g~s~~~~~----~~ 90 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRE----------------------LGITVVRFNFRSVGTSAGSFD----HG 90 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHT----------------------TTCEEEEECCTTSTTCCSCCC----TT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHH----------------------CCCeEEEEecCCCCCCCCCcc----cC
Confidence 57899999953 2 23346788888987 699999999999999986542 22
Q ss_pred HhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccC
Q 018750 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (351)
Q Consensus 111 ~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (351)
...++|+.++++.+ +.++++++|||+||.+++.++.++ +++++|++++......
T Consensus 91 ~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~-------------------- 148 (220)
T 2fuk_A 91 DGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD-------------------- 148 (220)
T ss_dssp THHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC--------------------
T ss_pred chhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh--------------------
Confidence 44566666655554 445899999999999999999987 8999999998631100
Q ss_pred CHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEE
Q 018750 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (351)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (351)
+ ..+. ..+|+++
T Consensus 149 ---------------------------------------~----------------------------~~~~-~~~p~l~ 160 (220)
T 2fuk_A 149 ---------------------------------------F----------------------------SDVQ-PPAQWLV 160 (220)
T ss_dssp ---------------------------------------C----------------------------TTCC-CCSSEEE
T ss_pred ---------------------------------------h----------------------------hhcc-cCCcEEE
Confidence 0 0001 1468999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 267 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
++|++|.+++.+..+.+.+.+.++.+++++++ ||.... +++++.+.+.+||++...
T Consensus 161 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 161 IQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp EEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGGCS
T ss_pred EECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998767899999998 999877 588999999999987643
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=174.51 Aligned_cols=172 Identities=19% Similarity=0.214 Sum_probs=133.9
Q ss_pred CCCCCeEEEEecCCCCccchHHHHHHhc---CCCCCCCCchhhhcccccCCCCCCCeEEEEecCC---------------
Q 018750 33 GRGPTKVILITGLAGTHDAWGPQLKGLA---GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR--------------- 94 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~--------------- 94 (351)
++..|+||++||++++...|..+++.|. . ||.|+++|+|
T Consensus 21 ~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~-----------------------g~~v~~~d~p~~~~~~~~g~~~~~w 77 (226)
T 3cn9_A 21 PNADACIIWLHGLGADRTDFKPVAEALQMVLP-----------------------STRFILPQAPSQAVTVNGGWVMPSW 77 (226)
T ss_dssp TTCCEEEEEECCTTCCGGGGHHHHHHHHHHCT-----------------------TEEEEECCCCEEECGGGTSCEEECS
T ss_pred CCCCCEEEEEecCCCChHHHHHHHHHHhhcCC-----------------------CcEEEeecCCCCccccCCCCccccc
Confidence 3456789999999999999999999988 5 9999997766
Q ss_pred ----CCCCCCCCCCCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHH-hCCcccceEEEeccCCCC
Q 018750 95 ----GMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAA-MVPERVLSLALLNVTGGG 164 (351)
Q Consensus 95 ----G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~ 164 (351)
|+|.+... ...++++.++++.++++.+ +. ++++++||||||.+++.++. ++|++++++|++++...
T Consensus 78 ~d~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~- 153 (226)
T 3cn9_A 78 YDILAFSPARAI---DEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAP- 153 (226)
T ss_dssp SCBCCSSSTTCB---CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCG-
T ss_pred cccccccccccc---cchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCC-
Confidence 66644221 3567889999999999887 55 58999999999999999999 99999999999997521
Q ss_pred CCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 165 FQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
... . . .
T Consensus 154 ------~~~---------------------------------~-~-~--------------------------------- 159 (226)
T 3cn9_A 154 ------TFD---------------------------------D-L-A--------------------------------- 159 (226)
T ss_dssp ------GGG---------------------------------G-C-C---------------------------------
T ss_pred ------Cch---------------------------------h-h-h---------------------------------
Confidence 000 0 0 0
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCCCccccccChHHHHHHHH
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPGGHLVSHERTEEVNQALI 315 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~ggH~~~~~~p~~~~~~i~ 315 (351)
. ....+++|+++++|++|.++|++.++.+.+.+.. +.+++++++||..+.+.++++.+.|.
T Consensus 160 ----~------~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~~~~~~~i~~~l~ 223 (226)
T 3cn9_A 160 ----L------DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVSLEEIHDIGAWLR 223 (226)
T ss_dssp ----C------CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEESCCSSCCHHHHHHHHHHHH
T ss_pred ----h------cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEecCCCCcchhhHHHHHHHHH
Confidence 0 0044568999999999999999999999988732 58888889889987766554444433
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-25 Score=187.08 Aligned_cols=219 Identities=11% Similarity=0.092 Sum_probs=142.3
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
+.++|||+||++++...|..+.+ |.. +|+|+++|+||+|.++.. .+++++++
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~-----------------------~~~v~~~d~~G~~~~~~~----~~~~~~~~ 71 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKS-----------------------DTAVVGLNCPYARDPENM----NCTHGAMI 71 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSS-----------------------SEEEEEEECTTTTCGGGC----CCCHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCC-----------------------CCEEEEEECCCCCCCCCC----CCCHHHHH
Confidence 34679999999999999999888 765 999999999999766543 35899999
Q ss_pred HHHHHHHHHhC-CcceEEEEEchhhHHHHHHHH---hCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHH
Q 018750 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAA---MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (351)
Q Consensus 115 ~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
+++.++++.+. .++++|+||||||.+|+.+|. .+|++++++|++++..+.... ... .........+.......
T Consensus 72 ~~~~~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~ 148 (265)
T 3ils_A 72 ESFCNEIRRRQPRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAME--QLP-RAFYEHCNSIGLFATQP 148 (265)
T ss_dssp HHHHHHHHHHCSSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCC--CCC-HHHHHHHHHTTTTTTSS
T ss_pred HHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccc--ccC-HHHHHHHHHHHHhCCCc
Confidence 99999999985 469999999999999999998 677889999999876432110 000 11111111110000000
Q ss_pred HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE-EEee
Q 018750 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS-VIHG 269 (351)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl-ii~g 269 (351)
.... .............+...+.... . +. . .....+++|++ +++|
T Consensus 149 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~---~----------~~--~-----~~~~~i~~P~~lii~G 194 (265)
T 3ils_A 149 GASP--------------DGSTEPPSYLIPHFTAVVDVML---D----------YK--L-----APLHARRMPKVGIVWA 194 (265)
T ss_dssp SSCS--------------SSCSCCCTTHHHHHHHHHHHTT---T----------CC--C-----CCCCCSSCCEEEEEEE
T ss_pred cccc--------------cCCHHHHHHHHHHHHHHHHHHH---h----------cC--C-----CCCccCCCCeEEEEEc
Confidence 0000 0000000000011111000000 0 00 0 01236789988 9999
Q ss_pred cC---CccC--------------CHHHHHHHHHHhC-CCceEEEcCC-Ccccc--ccChHHHHHHHHHHH
Q 018750 270 RH---DVIA--------------QICYARRLAEKLY-PVARMIDLPG-GHLVS--HERTEEVNQALIDLI 318 (351)
Q Consensus 270 ~~---D~~~--------------~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~--~~~p~~~~~~i~~fl 318 (351)
++ |..+ +......+.+... ++.++++++| ||+.+ .++++++++.|.+||
T Consensus 195 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 195 ADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred cCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 99 9987 4444455555543 4889999999 99999 899999999999997
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=187.42 Aligned_cols=210 Identities=16% Similarity=0.141 Sum_probs=141.0
Q ss_pred CCCCeEEEEecCCCCc--cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 34 RGPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
.+.|+|||+||++++. ..|..+...|.. +|+|+++|+||||.|+.. .++++
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~----~~~~~ 117 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALRG-----------------------IAPVRAVPQPGYEEGEPL----PSSMA 117 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTSS-----------------------SCCBCCCCCTTSSTTCCB----CSSHH
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcCC-----------------------CceEEEecCCCCCCCCCC----CCCHH
Confidence 3456899999999977 899999999987 899999999999998643 45899
Q ss_pred hHHHHHH-HHHHHhCCcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCC
Q 018750 112 IMAKDVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT 187 (351)
Q Consensus 112 ~~~~dl~-~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (351)
++++++. .+++.++.++++|+||||||.+|+.+|.++| ++|+++|++++..... .........
T Consensus 118 ~~a~~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~-------~~~~~~~~~------ 184 (300)
T 1kez_A 118 AVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGH-------QDAMNAWLE------ 184 (300)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTT-------CHHHHHHHH------
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcc-------hhHHHHHHH------
Confidence 9999988 4667778889999999999999999999988 4899999999864211 100100000
Q ss_pred HHHHhhcCccccccHHHHHHhhcCCc--hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 188 PEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
......+.... ........+...+. . .. . ..+..+++|++
T Consensus 185 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-----~~-~--~~~~~i~~P~l 226 (300)
T 1kez_A 185 ---------------ELTATLFDRETVRMDDTRLTALGAYDR---------------L-----TG-Q--WRPRETGLPTL 226 (300)
T ss_dssp ---------------HHHGGGCCCCSSCCCHHHHHHHHHHHH---------------H-----TT-T--CCCCCCSCCBE
T ss_pred ---------------HHHHHHHhCcCCccchHHHHHHHHHHH---------------H-----Hh-c--CCCCCCCCCEE
Confidence 00000000000 00000000000000 0 00 0 01367889999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccc-cChHHHHHHHHHHHHhcCC
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~-~~p~~~~~~i~~fl~~~~~ 323 (351)
+|+|++ .++++.. ..+.+.+..+.+++++++||+.++ ++++++++.|.+||++...
T Consensus 227 ii~G~d-~~~~~~~-~~~~~~~~~~~~~~~i~ggH~~~~~e~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 227 LVSAGE-PMGPWPD-DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLGGGNS 283 (300)
T ss_dssp EEEESS-CSSCCCS-SCCSCCCSSCCEEEEESSCTTTSSSSCSHHHHHHHHHHHTCC--
T ss_pred EEEeCC-CCCCCcc-cchhhhcCCCCeEEEecCCChhhccccHHHHHHHHHHHHHhccC
Confidence 999964 4555433 334443433579999999999986 8999999999999986543
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-23 Score=175.63 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=140.1
Q ss_pred CCCCeEEEEecCC-----CCccchHHHHHHh----cCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC
Q 018750 34 RGPTKVILITGLA-----GTHDAWGPQLKGL----AGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (351)
Q Consensus 34 ~~~p~vv~~HG~~-----~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (351)
.+.|+|||+||.+ ++...|..++..| .+ +||.|+++|+|+.+.+.
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~----------------------~g~~vi~~d~r~~~~~~---- 92 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTE----------------------STVCQYSIEYRLSPEIT---- 92 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTT----------------------CCEEEEEECCCCTTTSC----
T ss_pred CCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhcc----------------------CCcEEEEeecccCCCCC----
Confidence 3567899999965 4567889999988 34 59999999999876543
Q ss_pred CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-----------------CcccceEEEeccCCCCCCC
Q 018750 105 KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-----------------PERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~ 167 (351)
....++++.+.+..+++.++.++++|+||||||.+|+.++.++ |++++++|++++..
T Consensus 93 -~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~----- 166 (273)
T 1vkh_A 93 -NPRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIY----- 166 (273)
T ss_dssp -TTHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCC-----
T ss_pred -CCcHHHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccc-----
Confidence 2346778888888888888889999999999999999999886 78899999998752
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
........ .. ....+....+..... .+......
T Consensus 167 ----~~~~~~~~---~~---------------~~~~~~~~~~~~~~~---------------------~~~~~~~~---- 199 (273)
T 1vkh_A 167 ----SLKELLIE---YP---------------EYDCFTRLAFPDGIQ---------------------MYEEEPSR---- 199 (273)
T ss_dssp ----CHHHHHHH---CG---------------GGHHHHHHHCTTCGG---------------------GCCCCHHH----
T ss_pred ----cHHHhhhh---cc---------------cHHHHHHHHhccccc---------------------chhhcccc----
Confidence 10000000 00 000111111100000 00000000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccChHHHHHHHHHHH
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl 318 (351)
........+..+++|+|+++|++|.++|++.++.+.+.+. .+++++++++ ||..++++ +++.+.|.+||
T Consensus 200 -~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 200 -VMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp -HHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred -cChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 0000112334478999999999999999999999888762 2578999998 99999888 89999999886
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.5e-24 Score=179.38 Aligned_cols=180 Identities=16% Similarity=0.098 Sum_probs=131.7
Q ss_pred EEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe--cCCCCCCCCCCCC
Q 018750 28 FYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF--DNRGMGRSSVPVK 104 (351)
Q Consensus 28 ~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~--D~~G~G~S~~~~~ 104 (351)
++...++ +.|+||++||++++...|..+...|++ +|.|+++ |++|+|.|.....
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~~~d~~g~g~s~~~~~ 109 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLP-----------------------QATILSPVGDVSEHGAARFFRR 109 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHST-----------------------TSEEEEECCSEEETTEEESSCB
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhHHHHHHHhcCC-----------------------CceEEEecCCcCCCCCcccccC
Confidence 3444443 567899999999999999999999987 7999999 8999998753221
Q ss_pred C--Ccc---chHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 105 K--TEY---TTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 105 ~--~~~---~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
. ..+ ++.+.++++.++++.+ +.++++++||||||.+++.+|.++|++++++|++++......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------- 180 (251)
T 2r8b_A 110 TGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------- 180 (251)
T ss_dssp CGGGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------
Confidence 0 112 2333455555555544 778999999999999999999999999999999998631100
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
. .
T Consensus 181 -----------------------------------------------------~-------------------------~ 182 (251)
T 2r8b_A 181 -----------------------------------------------------K-------------------------I 182 (251)
T ss_dssp -----------------------------------------------------C-------------------------C
T ss_pred -----------------------------------------------------c-------------------------c
Confidence 0 0
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCC-CceEE-EcCC-CccccccChHHHHHHHHHH
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMI-DLPG-GHLVSHERTEEVNQALIDL 317 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~~g-gH~~~~~~p~~~~~~i~~f 317 (351)
....+++|+|+++|++|.+++.+..+.+.+.+.. +.++. .+++ ||..+.+.++++.+.|.++
T Consensus 183 ~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 183 SPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAY 247 (251)
T ss_dssp CCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGGG
T ss_pred cccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHHh
Confidence 0123568999999999999999999999988731 45554 5665 9998777665544444433
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=183.59 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=150.3
Q ss_pred CCeEEEEEEc---C---CCCCeEEEEecCCCCccchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 23 NGIKIFYRTY---G---RGPTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 23 ~g~~l~y~~~---g---~~~p~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+|..+++..+ + ...|+||++||++++...|.. +...|++ +||.|+++|+||
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g 134 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAE----------------------RGFVTLAFDPSY 134 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHH----------------------CCCEEEEECCCC
Confidence 5777776544 2 234689999999999888875 7888887 699999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
+|.|..... ...+....++|+.++++.+ +.++++++|||+||.+++.++..+| +|+++|++++...
T Consensus 135 ~g~s~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~------ 206 (367)
T 2hdw_A 135 TGESGGQPR-NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDM------ 206 (367)
T ss_dssp STTSCCSSS-SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCH------
T ss_pred cCCCCCcCc-cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccc------
Confidence 999975443 1223566777777777665 2358999999999999999999998 6999999986420
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcC--------C---chhhhhHHHHHhhhhhccC---C---
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS--------S---TRRAILYQEYVKGISATGM---Q--- 232 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~---~--- 232 (351)
...... .+............ ............... . .............+..... .
T Consensus 207 ---~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (367)
T 2hdw_A 207 ---TRVMSK--GYNDSVTLEQRTRT--LEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVN 279 (367)
T ss_dssp ---HHHHHH--TTTTCCCHHHHHHH--HHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCST
T ss_pred ---cHHHhh--hhccccchHHHHHH--HHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCccccc
Confidence 000000 00000000000000 000000000000000 0 0000011111111110000 0
Q ss_pred CCCCcc-hhhhhhhcccCCHHHHHHhhccC-ccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHH
Q 018750 233 SNYGFD-GQIHACWMHKMTQKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309 (351)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~ 309 (351)
....+. ...... ...+....+.+++ +|+|+++|++|. +.+.++++.+...++++++++++ ||..+.+.++.
T Consensus 280 ~~~~~~~~~~~~~----~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~ 353 (367)
T 2hdw_A 280 SGNAWTMTTPLSF----MNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDR 353 (367)
T ss_dssp TTCCCBTTTHHHH----TTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTT
T ss_pred ccchhhhhhHHHh----cCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchh
Confidence 000000 000000 0111123567788 999999999999 78888888886557899999998 99988877765
Q ss_pred -HHHHHHHHHHh
Q 018750 310 -VNQALIDLIKA 320 (351)
Q Consensus 310 -~~~~i~~fl~~ 320 (351)
+.+.|.+||++
T Consensus 354 ~~~~~i~~fl~~ 365 (367)
T 2hdw_A 354 IPFDRIAGFFDE 365 (367)
T ss_dssp SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 58999999975
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.5e-23 Score=170.80 Aligned_cols=199 Identities=14% Similarity=0.081 Sum_probs=147.9
Q ss_pred cccCCeEEEEEEcCC-----CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 20 LNDNGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~-----~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
++.+|..+.+....+ ..|+||++||++++...|..+...|++ +||.|+++|++
T Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~----------------------~G~~v~~~d~~ 68 (241)
T 3f67_A 11 IPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQ----------------------EGYLAIAPELY 68 (241)
T ss_dssp EEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHHHHHHHHHH----------------------TTCEEEEECTT
T ss_pred EecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHHHHHHHHHH----------------------CCcEEEEeccc
Confidence 344788877655431 236899999999999889999999987 69999999999
Q ss_pred CCCCCCCCCCC---------CccchHhHHHHHHHHHHHhC-----CcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 95 GMGRSSVPVKK---------TEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 95 G~G~S~~~~~~---------~~~~~~~~~~dl~~~l~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
|+|.+...... ...+..+.++|+.++++.+. .++++++||||||.+++.++..+|+ +.++|++.+
T Consensus 69 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~ 147 (241)
T 3f67_A 69 FRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYG 147 (241)
T ss_dssp TTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESC
T ss_pred ccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEec
Confidence 99877543321 11234567888888887763 3579999999999999999999987 777777665
Q ss_pred CCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
...... ..
T Consensus 148 ~~~~~~--------------------------------------------~~---------------------------- 155 (241)
T 3f67_A 148 KLVGEK--------------------------------------------SL---------------------------- 155 (241)
T ss_dssp CCSCCC--------------------------------------------CS----------------------------
T ss_pred cccCCC--------------------------------------------cc----------------------------
Confidence 421000 00
Q ss_pred hhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc--------cChH
Q 018750 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH--------ERTE 308 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~--------~~p~ 308 (351)
.........+.++++|+++++|++|.++|++..+.+.+.+ .++.+++++++ +|.... +..+
T Consensus 156 -------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 228 (241)
T 3f67_A 156 -------NSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAK 228 (241)
T ss_dssp -------SSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHH
T ss_pred -------CCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHH
Confidence 0001122456778899999999999999999988888876 36789999998 998763 2347
Q ss_pred HHHHHHHHHHHh
Q 018750 309 EVNQALIDLIKA 320 (351)
Q Consensus 309 ~~~~~i~~fl~~ 320 (351)
++.+.+.+||++
T Consensus 229 ~~~~~~~~fl~~ 240 (241)
T 3f67_A 229 DGWQRMLAWFAQ 240 (241)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 788999999975
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=178.10 Aligned_cols=188 Identities=13% Similarity=0.089 Sum_probs=139.3
Q ss_pred CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 34 RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 34 ~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
.+.|+|||+||.+ ++...|..+...|.+ +||.|+++|+||+|. .++
T Consensus 61 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~~~~~---------~~~ 109 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALS----------------------KGWAVAMPSYELCPE---------VRI 109 (262)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHH----------------------TTEEEEEECCCCTTT---------SCH
T ss_pred CCCCEEEEEcCcccccCChHHHHHHHHHHHh----------------------CCCEEEEeCCCCCCC---------CCh
Confidence 4567899999954 777889999999987 699999999999864 257
Q ss_pred HhHHHHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHhC------CcccceEEEeccCCCCCCCCCccchhhhHHHHh
Q 018750 111 KIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
.+.++|+.++++.+.. ++++|+||||||.+++.++..+ |++++++|++++... ....
T Consensus 110 ~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~-------~~~~------- 175 (262)
T 2pbl_A 110 SEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSD-------LRPL------- 175 (262)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCC-------CGGG-------
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccC-------chHH-------
Confidence 7788888888887754 5899999999999999999888 889999999997531 0000
Q ss_pred hcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccC
Q 018750 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (351)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (351)
.... ........ .... ... .....+..++
T Consensus 176 -~~~~------------------~~~~~~~~------~~~~-~~~-------------------------~~~~~~~~~~ 204 (262)
T 2pbl_A 176 -LRTS------------------MNEKFKMD------ADAA-IAE-------------------------SPVEMQNRYD 204 (262)
T ss_dssp -GGST------------------THHHHCCC------HHHH-HHT-------------------------CGGGCCCCCS
T ss_pred -Hhhh------------------hhhhhCCC------HHHH-Hhc-------------------------CcccccCCCC
Confidence 0000 00000000 0000 000 0011235678
Q ss_pred ccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 262 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
+|+++++|++|.+++.+.++.+.+.+ + ++++++++ ||+.+.+++++....+.+++-
T Consensus 205 ~P~lii~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 205 AKVTVWVGGAERPAFLDQAIWLVEAW-D-ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp CEEEEEEETTSCHHHHHHHHHHHHHH-T-CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CCEEEEEeCCCCcccHHHHHHHHHHh-C-CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 99999999999999999999999988 5 99999998 999999999888888877763
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=7e-23 Score=167.24 Aligned_cols=187 Identities=9% Similarity=0.019 Sum_probs=121.6
Q ss_pred CeEEEEecCCCCccchH--HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 37 TKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
|+|||+||++++...+. .+.+.+.+.+ .+|+|+++|+||+|. +..
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~--------------------~~~~v~~pdl~~~g~-------------~~~ 49 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHH--------------------PHIEMQIPQLPPYPA-------------EAA 49 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHC--------------------TTSEEECCCCCSSHH-------------HHH
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcC--------------------CCcEEEEeCCCCCHH-------------HHH
Confidence 78999999998877653 2334443310 269999999999874 456
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhc
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
+++..+++....++++|+||||||.+|+.+|.++|..+..++...+.. ........... ....
T Consensus 50 ~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~---~~~~ 112 (202)
T 4fle_A 50 EMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF--------------ELLSDYLGENQ---NPYT 112 (202)
T ss_dssp HHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH--------------HHGGGGCEEEE---CTTT
T ss_pred HHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchH--------------HHHHHhhhhhc---cccc
Confidence 778888888888999999999999999999999998766655443320 00000000000 0000
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCcc
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 274 (351)
........... .... .......++++|+|+|+|++|.+
T Consensus 113 ~~~~~~~~~~~--------------~~~~----------------------------~~~~~~~~~~~P~LiihG~~D~~ 150 (202)
T 4fle_A 113 GQKYVLESRHI--------------YDLK----------------------------AMQIEKLESPDLLWLLQQTGDEV 150 (202)
T ss_dssp CCEEEECHHHH--------------HHHH----------------------------TTCCSSCSCGGGEEEEEETTCSS
T ss_pred cccccchHHHH--------------HHHH----------------------------hhhhhhhccCceEEEEEeCCCCC
Confidence 00000000000 0000 00012356778999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+|.+.+.++. +++++.+++| ||.. +.++++.+.|.+||+-.
T Consensus 151 Vp~~~s~~l~----~~~~l~i~~g~~H~~--~~~~~~~~~I~~FL~~a 192 (202)
T 4fle_A 151 LDYRQAVAYY----TPCRQTVESGGNHAF--VGFDHYFSPIVTFLGLA 192 (202)
T ss_dssp SCHHHHHHHT----TTSEEEEESSCCTTC--TTGGGGHHHHHHHHTCC
T ss_pred CCHHHHHHHh----hCCEEEEECCCCcCC--CCHHHHHHHHHHHHhhh
Confidence 9998876653 6789999998 8963 56778899999999743
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=175.04 Aligned_cols=181 Identities=15% Similarity=0.059 Sum_probs=137.1
Q ss_pred eEEEEEEc----CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC
Q 018750 25 IKIFYRTY----GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (351)
Q Consensus 25 ~~l~y~~~----g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (351)
..++|-.. |.+.|+|||+||++++...|..+...|++ +||.|+++|+||.+
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~~s~--- 88 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWAS----------------------HGFVVAAAETSNAG--- 88 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCGGGGHHHHHHHHH----------------------HTCEEEEECCSCCT---
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCchhHHHHHHHHHh----------------------CCeEEEEecCCCCc---
Confidence 56666554 22457899999999999999999999987 69999999999531
Q ss_pred CCCCCCccchHhHHHHHHHHHH--------HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 101 VPVKKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~--------~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
...+.....+.+.+... .++.++++++||||||.+++.++ .++++++++++++....
T Consensus 89 -----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~-------- 153 (258)
T 2fx5_A 89 -----TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG-------- 153 (258)
T ss_dssp -----TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS--------
T ss_pred -----cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc--------
Confidence 11233444444444433 34456899999999999999988 45689999999864200
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
.. ..
T Consensus 154 --------------------------------------~~------------------------------------~~-- 157 (258)
T 2fx5_A 154 --------------------------------------LG------------------------------------HD-- 157 (258)
T ss_dssp --------------------------------------TT------------------------------------CC--
T ss_pred --------------------------------------cc------------------------------------cc--
Confidence 00 00
Q ss_pred HHHHhhccCccEEEEeecCCccCCHHH-HHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 253 DIQTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
...+.++++|+|+|+|++|.+++++. .+.+.+....+++++++++ ||+.+.++++++.+.|.+||+...
T Consensus 158 -~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 158 -SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQL 228 (258)
T ss_dssp -GGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHH
T ss_pred -hhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHh
Confidence 01346678999999999999999986 7888876434689999998 999999999999999999998543
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=183.89 Aligned_cols=232 Identities=13% Similarity=0.086 Sum_probs=149.9
Q ss_pred cccCCeEEEEEEcC----CCCCeEEEEecCCCCcc-chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 20 LNDNGIKIFYRTYG----RGPTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 20 ~~~~g~~l~y~~~g----~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
+..+|..+....+. ...|+||++||++++.. .|..+...|.+ +||.|+++|+|
T Consensus 173 i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~----------------------~G~~V~~~D~~ 230 (415)
T 3mve_A 173 IPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAK----------------------HDIAMLTVDMP 230 (415)
T ss_dssp EECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGG----------------------GTCEEEEECCT
T ss_pred EEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHh----------------------CCCEEEEECCC
Confidence 34467777654442 23478999999998854 55566677766 69999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhC---CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
|+|.|.... ...+.+.++.++.+++.... .++++++||||||.+++.+|..+|++|+++|++++.... .
T Consensus 231 G~G~s~~~~--~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~------~ 302 (415)
T 3mve_A 231 SVGYSSKYP--LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD------I 302 (415)
T ss_dssp TSGGGTTSC--CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH------H
T ss_pred CCCCCCCCC--CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc------c
Confidence 999997654 23456777777777777664 468999999999999999999999999999999976210 0
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
.. .......... .....+....+....... .+...+..... ...
T Consensus 303 ~~-----~~~~~~~~~~-----------~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~-----------------~~~ 346 (415)
T 3mve_A 303 FA-----SPQKLQQMPK-----------MYLDVLASRLGKSVVDIY---SLSGQMAAWSL-----------------KVQ 346 (415)
T ss_dssp HH-----CHHHHTTSCH-----------HHHHHHHHHTTCSSBCHH---HHHHHGGGGCT-----------------TTT
T ss_pred cc-----cHHHHHHhHH-----------HHHHHHHHHhCCCccCHH---HHHHHHhhcCc-----------------ccc
Confidence 00 0000000000 001111111111111100 01110000000 000
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.... ..++++|+|+|+|++|.++|++.++.+.+. .++++++++++++ .++.++++.+.+.+||++.
T Consensus 347 ~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~-~~~~~l~~i~g~~--~h~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 347 GFLS-SRKTKVPILAMSLEGDPVSPYSDNQMVAFF-STYGKAKKISSKT--ITQGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp TTTT-SSCBSSCEEEEEETTCSSSCHHHHHHHHHT-BTTCEEEEECCCS--HHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cCCCCCCEEEEEeCCCCCCCHHHHHHHHHh-CCCceEEEecCCC--cccchHHHHHHHHHHHHHH
Confidence 0000 357889999999999999999999999886 4899999999832 2247788999999999864
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=174.43 Aligned_cols=215 Identities=12% Similarity=0.011 Sum_probs=146.6
Q ss_pred ccccccCCeEEEEEEcCC-------CCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe
Q 018750 17 DAALNDNGIKIFYRTYGR-------GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-------~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (351)
..+...+|..+.++...+ ..|+||++||.+ ++...|..+...|++ +||
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~ 74 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLA----------------------QGY 74 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHH----------------------TTC
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHH----------------------CCC
Confidence 445566788887665543 237899999943 556678888899987 699
Q ss_pred EEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh---------CCcceEEEEEchhhHHHHHHHHh-CCcccceEE
Q 018750 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---------GWKQAHVFGHSMGAMIACKLAAM-VPERVLSLA 156 (351)
Q Consensus 87 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---------~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~lv 156 (351)
.|+++|+||+|.|.... +.....+|+.++++.+ +.++++|+||||||.+++.++.. .+.+++++|
T Consensus 75 ~v~~~d~~g~g~s~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v 149 (276)
T 3hxk_A 75 QVLLLNYTVMNKGTNYN-----FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVI 149 (276)
T ss_dssp EEEEEECCCTTSCCCSC-----THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEE
T ss_pred EEEEecCccCCCcCCCC-----cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEE
Confidence 99999999999986433 2333444444443322 23589999999999999999988 788999999
Q ss_pred EeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCC
Q 018750 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (351)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (351)
+++|............ ... .++.... ..
T Consensus 150 ~~~p~~~~~~~~~~~~----------------------~~~---------~~~~~~~----------~~----------- 177 (276)
T 3hxk_A 150 LCYPVTSFTFGWPSDL----------------------SHF---------NFEIENI----------SE----------- 177 (276)
T ss_dssp EEEECCBTTSSCSSSS----------------------SSS---------CCCCSCC----------GG-----------
T ss_pred EecCcccHHhhCCcch----------------------hhh---------hcCchhh----------hh-----------
Confidence 9998642111100000 000 0000000 00
Q ss_pred cchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccCh-----
Q 018750 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERT----- 307 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p----- 307 (351)
......+.++++|+|+++|++|.++|.+.++.+.+.+. .+++++++++ ||......+
T Consensus 178 --------------~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 243 (276)
T 3hxk_A 178 --------------YNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPS 243 (276)
T ss_dssp --------------GBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSS
T ss_pred --------------CChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCcccccc
Confidence 00112345677899999999999999999988888772 3468999998 997766544
Q ss_pred --------HHHHHHHHHHHHhcCCC
Q 018750 308 --------EEVNQALIDLIKASEKK 324 (351)
Q Consensus 308 --------~~~~~~i~~fl~~~~~~ 324 (351)
+++.+.+.+||++..+.
T Consensus 244 ~~~~~~~~~~~~~~~~~wl~~~~~~ 268 (276)
T 3hxk_A 244 DAYCLPSVHRWVSWASDWLERQIKN 268 (276)
T ss_dssp STTCCHHHHTHHHHHHHHHHHHHHT
T ss_pred ccccCchHHHHHHHHHHHHHhCccc
Confidence 67888999999886543
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-21 Score=170.02 Aligned_cols=224 Identities=13% Similarity=0.032 Sum_probs=143.6
Q ss_pred cCCeEEEEEEcC----CCCCeEEEEecCCCC-ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 22 DNGIKIFYRTYG----RGPTKVILITGLAGT-HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 22 ~~g~~l~y~~~g----~~~p~vv~~HG~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
.+|.++.+..+. .+.|+||++||++++ ...|.... .|++ +||.|+++|+||+
T Consensus 64 ~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~----------------------~g~~v~~~d~rg~ 120 (318)
T 1l7a_A 64 FGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMV-NWAL----------------------HGYATFGMLVRGQ 120 (318)
T ss_dssp GGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHH-HHHH----------------------TTCEEEEECCTTT
T ss_pred cCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCccccc-chhh----------------------CCcEEEEecCCCC
Confidence 367777655442 234689999999999 88887766 5554 5999999999999
Q ss_pred CCCCCCCC----------------CCccchHhHHHHHHHHHHHhC------CcceEEEEEchhhHHHHHHHHhCCcccce
Q 018750 97 GRSSVPVK----------------KTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (351)
Q Consensus 97 G~S~~~~~----------------~~~~~~~~~~~dl~~~l~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~ 154 (351)
|.|..... ...+.+...++|+.++++.+. .++++++|||+||.+++.+|..+|+ +.+
T Consensus 121 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~ 199 (318)
T 1l7a_A 121 QRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKA 199 (318)
T ss_dssp SSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSE
T ss_pred CCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccE
Confidence 99875521 112334567777777776652 2689999999999999999999885 888
Q ss_pred EEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC
Q 018750 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (351)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (351)
+|+++|.... ... ........ . ......++... .. ...........
T Consensus 200 ~v~~~p~~~~--------~~~---~~~~~~~~-~---------~~~~~~~~~~~-~~----~~~~~~~~~~~-------- 245 (318)
T 1l7a_A 200 AVADYPYLSN--------FER---AIDVALEQ-P---------YLEINSFFRRN-GS----PETEVQAMKTL-------- 245 (318)
T ss_dssp EEEESCCSCC--------HHH---HHHHCCST-T---------TTHHHHHHHHS-CC----HHHHHHHHHHH--------
T ss_pred EEecCCcccC--------HHH---HHhcCCcC-c---------cHHHHHHHhcc-CC----cccHHHHHHhh--------
Confidence 8887764210 000 00000000 0 00000001000 00 00000000000
Q ss_pred CCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHH
Q 018750 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~ 313 (351)
...+....+.++++|+|+++|++|.++|++..+.+.+.+...++++++++ ||.. ..++.+.
T Consensus 246 --------------~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~----~~~~~~~ 307 (318)
T 1l7a_A 246 --------------SYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTE 307 (318)
T ss_dssp --------------HTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHH
T ss_pred --------------ccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCC----cchhHHH
Confidence 00123345677889999999999999999999999998855689999998 9983 3456777
Q ss_pred HHHHHHhc
Q 018750 314 LIDLIKAS 321 (351)
Q Consensus 314 i~~fl~~~ 321 (351)
+.+||++.
T Consensus 308 ~~~fl~~~ 315 (318)
T 1l7a_A 308 KLAFFKQI 315 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777653
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=177.48 Aligned_cols=197 Identities=11% Similarity=-0.001 Sum_probs=131.8
Q ss_pred CCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC--CCCCCCccc
Q 018750 35 GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS--VPVKKTEYT 109 (351)
Q Consensus 35 ~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~--~~~~~~~~~ 109 (351)
+.|+||++||.+ ++...|..++..|++ +||.|+++|+||+|.+. .+. ...+
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~~~~~~~~~~--~~~d 104 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAG----------------------HGYQAFYLEYTLLTDQQPLGLA--PVLD 104 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHT----------------------TTCEEEEEECCCTTTCSSCBTH--HHHH
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHh----------------------CCcEEEEEeccCCCccccCchh--HHHH
Confidence 346899999954 455668889999987 69999999999999873 211 1112
Q ss_pred hHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcc-------------cceEEEeccCCCCCCCCCccchh
Q 018750 110 TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPER-------------VLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
..+.++.+.+..+.++. ++++|+||||||.+|+.++..+|++ ++++|++++.........
T Consensus 105 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~----- 179 (283)
T 3bjr_A 105 LGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFP----- 179 (283)
T ss_dssp HHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC------
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccc-----
Confidence 22333333333334444 4899999999999999999999976 899999987631100000
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
.. ...+..++. . . ...+..
T Consensus 180 --------------~~-----------~~~~~~~~~--------------------------~---~-------~~~~~~ 198 (283)
T 3bjr_A 180 --------------KD-----------DATLATWTP--------------------------T---P-------NELAAD 198 (283)
T ss_dssp --------------------------------CCCC--------------------------C---G-------GGGCGG
T ss_pred --------------cc-----------cchHHHHHH--------------------------H---h-------HhcCHH
Confidence 00 000000000 0 0 000111
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccCh-------------HHHHHHHHHH
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERT-------------EEVNQALIDL 317 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p-------------~~~~~~i~~f 317 (351)
..+.++++|+|+++|++|.++|++.++.+.+.+. .+.+++++++ ||....+.+ +++.+.+.+|
T Consensus 199 ~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 278 (283)
T 3bjr_A 199 QHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEW 278 (283)
T ss_dssp GSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHH
T ss_pred HhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHH
Confidence 2345678999999999999999999988888772 2468999998 997776654 6788999999
Q ss_pred HHhc
Q 018750 318 IKAS 321 (351)
Q Consensus 318 l~~~ 321 (351)
|++.
T Consensus 279 l~~~ 282 (283)
T 3bjr_A 279 LADN 282 (283)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 9764
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-22 Score=165.03 Aligned_cols=170 Identities=13% Similarity=0.016 Sum_probs=126.7
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec-------------CCCCCCCCC
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD-------------NRGMGRSSV 101 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D-------------~~G~G~S~~ 101 (351)
+.| ||++||++++...|..+.+.|.. ++.|+++| ++|+|.+..
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~ 71 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAP-----------------------SHPILSIRGRINEQGVNRYFKLRGLGGFTK 71 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHST-----------------------TCCEEEECCSBCGGGCCBSSCBCSCTTCSG
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCC-----------------------CceEEEecCCcCCCCcccceeccccccccc
Confidence 457 99999999999999999999986 99999999 777777543
Q ss_pred CCCCCccchHhHHHHHHHHHH----HhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 102 PVKKTEYTTKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~----~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
... ...++.+.++++.++++ ..+. ++++++||||||.+++.++.++|++++++|++++......
T Consensus 72 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------- 141 (209)
T 3og9_A 72 ENF-DLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF--------- 141 (209)
T ss_dssp GGB-CHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC---------
T ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc---------
Confidence 321 12244445555555554 4455 7899999999999999999999999999999997521000
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
. .
T Consensus 142 ------------------------------------~------------------------------------------~ 143 (209)
T 3og9_A 142 ------------------------------------E------------------------------------------Q 143 (209)
T ss_dssp ------------------------------------C------------------------------------------C
T ss_pred ------------------------------------c------------------------------------------c
Confidence 0 0
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.....++|+++++|++|.++|.+.++++.+.+. ...+++++++||.... +..+.+.+||++
T Consensus 144 ~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~l~~ 207 (209)
T 3og9_A 144 TVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESSLGHQLTQ----EEVLAAKKWLTE 207 (209)
T ss_dssp CCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECSSTTSCCH----HHHHHHHHHHHH
T ss_pred cccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcCCCCcCCH----HHHHHHHHHHHh
Confidence 012345899999999999999999888887762 2367777888998743 445667777765
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=172.81 Aligned_cols=224 Identities=12% Similarity=0.030 Sum_probs=140.6
Q ss_pred ccCCeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 21 NDNGIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 21 ~~~g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..+|.++.+.... ...|+||++||++++...+.. ...+.+ +||.|+++|+||
T Consensus 75 ~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~-~~~l~~----------------------~G~~v~~~d~rG 131 (337)
T 1vlq_A 75 GYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHD-WLFWPS----------------------MGYICFVMDTRG 131 (337)
T ss_dssp CGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGG-GCHHHH----------------------TTCEEEEECCTT
T ss_pred cCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchh-hcchhh----------------------CCCEEEEecCCC
Confidence 4567777765542 234689999999988765443 334444 599999999999
Q ss_pred CCCCCCCCC-----------------------CCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHH
Q 018750 96 MGRSSVPVK-----------------------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAA 146 (351)
Q Consensus 96 ~G~S~~~~~-----------------------~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~ 146 (351)
+|.|..... ...+++...++|+.++++.+ +.++++++|||+||.+++.+|.
T Consensus 132 ~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~ 211 (337)
T 1vlq_A 132 QGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSA 211 (337)
T ss_dssp CCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHh
Confidence 997653210 01234457788888887776 2358999999999999999999
Q ss_pred hCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhh
Q 018750 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGI 226 (351)
Q Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (351)
.+| +++++|+.++.... ... ......... ...+..++.... .........+
T Consensus 212 ~~p-~v~~~vl~~p~~~~--------~~~---~~~~~~~~~--------------~~~~~~~~~~~~---~~~~~~~~~~ 262 (337)
T 1vlq_A 212 LSK-KAKALLCDVPFLCH--------FRR---AVQLVDTHP--------------YAEITNFLKTHR---DKEEIVFRTL 262 (337)
T ss_dssp HCS-SCCEEEEESCCSCC--------HHH---HHHHCCCTT--------------HHHHHHHHHHCT---TCHHHHHHHH
T ss_pred cCC-CccEEEECCCcccC--------HHH---HHhcCCCcc--------------hHHHHHHHHhCc---hhHHHHHHhh
Confidence 998 59999998875211 000 000000000 000000100000 0000000000
Q ss_pred hhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Ccccccc
Q 018750 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (351)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~ 305 (351)
...+....+.++++|+|+++|++|.++|++..+.+.+.+..+++++++++ ||....
T Consensus 263 ----------------------~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~- 319 (337)
T 1vlq_A 263 ----------------------SYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGG- 319 (337)
T ss_dssp ----------------------HTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTH-
T ss_pred ----------------------hhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcc-
Confidence 01122345677889999999999999999999999998855688999998 998532
Q ss_pred ChHHHHHHHHHHHHhc
Q 018750 306 RTEEVNQALIDLIKAS 321 (351)
Q Consensus 306 ~p~~~~~~i~~fl~~~ 321 (351)
++..+.+.+||.+.
T Consensus 320 --~~~~~~~~~fl~~~ 333 (337)
T 1vlq_A 320 --SFQAVEQVKFLKKL 333 (337)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --hhhHHHHHHHHHHH
Confidence 24455666666543
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-21 Score=167.08 Aligned_cols=196 Identities=8% Similarity=0.009 Sum_probs=127.6
Q ss_pred CCCeEEEEec---CCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITG---LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
+.|+||++|| .+++...|..++..|++ +||.|+++|+||+|.+.. . .....+
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g~~~~-~--~~~~~~ 88 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMA----------------------AGMHTVVLNYQLIVGDQS-V--YPWALQ 88 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHH----------------------TTCEEEEEECCCSTTTCC-C--TTHHHH
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHH----------------------CCCEEEEEecccCCCCCc-c--CchHHH
Confidence 4478999999 56777788999999987 699999999999994433 1 223334
Q ss_pred hHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHhC--------------CcccceEEEeccCCCCCCCCCccc
Q 018750 112 IMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMV--------------PERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 112 ~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~~--------------p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
+..+.+..+.+ .++. ++++++||||||.+|+.++..+ +.+++++|+++|.........
T Consensus 89 d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~--- 165 (277)
T 3bxp_A 89 QLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFP--- 165 (277)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSS---
T ss_pred HHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCC---
Confidence 44433333333 2333 5899999999999999999985 678999999997631100000
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHH-HhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
. ..... .++. ... ..
T Consensus 166 ------------~----------------~~~~~~~~~~--------------~~~----------------------~~ 181 (277)
T 3bxp_A 166 ------------T----------------TSAARNQITT--------------DAR----------------------LW 181 (277)
T ss_dssp ------------S----------------SHHHHHHHCS--------------CGG----------------------GS
T ss_pred ------------C----------------ccccchhccc--------------hhh----------------------hc
Confidence 0 00000 1110 000 00
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccC---------------hHHHHH
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHER---------------TEEVNQ 312 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~---------------p~~~~~ 312 (351)
+....+.++.+|+|+++|++|.++|++.++.+.+.+ ..+++++++++ +|...... .+++.+
T Consensus 182 ~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (277)
T 3bxp_A 182 AAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQ 261 (277)
T ss_dssp BGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHH
T ss_pred CHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHH
Confidence 011223456789999999999999999888888776 23568999998 99554443 478899
Q ss_pred HHHHHHHhcC
Q 018750 313 ALIDLIKASE 322 (351)
Q Consensus 313 ~i~~fl~~~~ 322 (351)
.+.+||++..
T Consensus 262 ~~~~fl~~~~ 271 (277)
T 3bxp_A 262 LALRWLQEQG 271 (277)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcc
Confidence 9999998764
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=163.19 Aligned_cols=192 Identities=15% Similarity=0.087 Sum_probs=136.5
Q ss_pred EEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCC------
Q 018750 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS------ 100 (351)
Q Consensus 27 l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~------ 100 (351)
+.+...++..|+|||+||++++...|..+...|... .+...+++|+++|.|+++.+.
T Consensus 14 ~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~-----------------~~~~~~~~v~~~~~~~~~~~~~~~~~~ 76 (239)
T 3u0v_A 14 CIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQ-----------------DLTFQHIKIIYPTAPPRSYTPMKGGIS 76 (239)
T ss_dssp EEECCSSCCCEEEEEECCTTCCHHHHHHHHHHHHTS-----------------CCCCSSEEEEEECCCEEECGGGTTCEE
T ss_pred eecCCCCCCCcEEEEEecCCCchhhHHHHHHHHhhc-----------------ccCCCceEEEeCCCCccccccCCCCcc
Confidence 333344456788999999999999999999988762 122258999998876532110
Q ss_pred ----------CCCCCCccchHhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 101 ----------VPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 101 ----------~~~~~~~~~~~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
........++++.++++.++++.. +.++++|+||||||.+++.++.++|++++++|++++....
T Consensus 77 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~- 155 (239)
T 3u0v_A 77 NVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNK- 155 (239)
T ss_dssp ECSSCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCT-
T ss_pred ccceeccCCCcccccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCc-
Confidence 001113457888889999988873 5579999999999999999999999999999999976310
Q ss_pred CCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
.... . ..
T Consensus 156 ------~~~~-----------------------------~--------------~~------------------------ 162 (239)
T 3u0v_A 156 ------ASAV-----------------------------Y--------------QA------------------------ 162 (239)
T ss_dssp ------TCHH-----------------------------H--------------HH------------------------
T ss_pred ------hhHH-----------------------------H--------------HH------------------------
Confidence 0000 0 00
Q ss_pred cccCCHHHHHHhhccCcc-EEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 246 MHKMTQKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
......++| +++++|++|.++|.+.++.+.+.+ ..+.+++++++ ||.... +..+.+.+||++
T Consensus 163 ---------~~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~ 229 (239)
T 3u0v_A 163 ---------LQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK----TELDILKLWILT 229 (239)
T ss_dssp ---------HHHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH----HHHHHHHHHHHH
T ss_pred ---------HHhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH----HHHHHHHHHHHH
Confidence 001223466 999999999999998888888776 23688999998 999873 445556666665
Q ss_pred cC
Q 018750 321 SE 322 (351)
Q Consensus 321 ~~ 322 (351)
..
T Consensus 230 ~l 231 (239)
T 3u0v_A 230 KL 231 (239)
T ss_dssp HC
T ss_pred hC
Confidence 43
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-22 Score=166.11 Aligned_cols=192 Identities=12% Similarity=0.090 Sum_probs=136.5
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCC---eEEEEecCCCCCCCC--CC-----CC--
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG---IEVCAFDNRGMGRSS--VP-----VK-- 104 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g---~~vi~~D~~G~G~S~--~~-----~~-- 104 (351)
++|||+||++++...|..+++.|.+ +| ++|+.+|.+++|.+. .. ..
T Consensus 5 ~pvv~iHG~~~~~~~~~~~~~~L~~----------------------~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~ 62 (250)
T 3lp5_A 5 APVIMVPGSSASQNRFDSLITELGK----------------------ETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPF 62 (250)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHHHH----------------------HSSSCCCEEEEEECTTSCEEEEECCCTTCSSCE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHh----------------------cCCCCceEEEEEEecCCeEEEeeecCCCCcCCe
Confidence 3599999999999999999999987 34 789988888877631 10 00
Q ss_pred --------CCcc-chHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhC-----CcccceEEEeccCCCCCC
Q 018750 105 --------KTEY-TTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 105 --------~~~~-~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~ 166 (351)
...| +++++++++.++++.+ +.+++++|||||||.+++.++..+ |++|+++|+++++..+..
T Consensus 63 i~v~f~~n~~~~~~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~ 142 (250)
T 3lp5_A 63 IVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMES 142 (250)
T ss_dssp EEEEESCCCCSHHHHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTC
T ss_pred EEEEeccCCCcccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccc
Confidence 0112 6788889999888887 788999999999999999999987 668999999998753321
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
..+ .. ....++.+.+.
T Consensus 143 ~~~----------------------------~~---------------~~~~~~~l~~~--------------------- 158 (250)
T 3lp5_A 143 TST----------------------------TA---------------KTSMFKELYRY--------------------- 158 (250)
T ss_dssp CCS----------------------------SC---------------CCHHHHHHHHT---------------------
T ss_pred ccc----------------------------cc---------------cCHHHHHHHhc---------------------
Confidence 100 00 00000010000
Q ss_pred ccCCHHHHHHhhccCccEEEEeec----CCccCCHHHHHHHHHHhCCC-ce--EEEcC--C-CccccccChHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGR----HDVIAQICYARRLAEKLYPV-AR--MIDLP--G-GHLVSHERTEEVNQALID 316 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~----~D~~~~~~~~~~~~~~~~~~-~~--~~~~~--g-gH~~~~~~p~~~~~~i~~ 316 (351)
...+.+ ++|+++|+|+ .|.++|.+.++.+...+.+. .. .+.+. + +|..+.++| +|.+.|.+
T Consensus 159 -------~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~ 229 (250)
T 3lp5_A 159 -------RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQ 229 (250)
T ss_dssp -------GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHH
T ss_pred -------cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHH
Confidence 011222 6899999999 99999999988877665332 22 33343 3 699999988 89999999
Q ss_pred HHHhcCC
Q 018750 317 LIKASEK 323 (351)
Q Consensus 317 fl~~~~~ 323 (351)
||.+.+.
T Consensus 230 FL~~~~~ 236 (250)
T 3lp5_A 230 YLLAETM 236 (250)
T ss_dssp HTSCCCC
T ss_pred HHhcccc
Confidence 9987654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=186.71 Aligned_cols=223 Identities=14% Similarity=0.135 Sum_probs=152.1
Q ss_pred cccCCeEEEEEEcCC-----CCCeEEEEecCCCC--ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 20 LNDNGIKIFYRTYGR-----GPTKVILITGLAGT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~-----~~p~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
...+|.++++..+.+ ..|+||++||.+.+ ...|..+...|++ +||.|+++|
T Consensus 339 ~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d 396 (582)
T 3o4h_A 339 ESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAA----------------------AGFHVVMPN 396 (582)
T ss_dssp ECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHH----------------------TTCEEEEEC
T ss_pred ECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHh----------------------CCCEEEEec
Confidence 334787887766532 34789999998776 6778899999987 699999999
Q ss_pred CCC---CCCCCCC---CCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 93 NRG---MGRSSVP---VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 93 ~~G---~G~S~~~---~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
+|| +|.+... ........+++.+.+..+++....++++|+||||||.+++.+|.++|++++++|++++..
T Consensus 397 ~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~---- 472 (582)
T 3o4h_A 397 YRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVV---- 472 (582)
T ss_dssp CTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCC----
T ss_pred cCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCcc----
Confidence 999 6655221 111223455555555555555444589999999999999999999999999999999752
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
+.... ....... ...+....++ . ..+.+..
T Consensus 473 -----~~~~~------~~~~~~~-----------~~~~~~~~~~---~---~~~~~~~---------------------- 502 (582)
T 3o4h_A 473 -----DWEEM------YELSDAA-----------FRNFIEQLTG---G---SREIMRS---------------------- 502 (582)
T ss_dssp -----CHHHH------HHTCCHH-----------HHHHHHHHTT---T---CHHHHHH----------------------
T ss_pred -----CHHHH------hhcccch-----------hHHHHHHHcC---c---CHHHHHh----------------------
Confidence 10000 0000000 0011111111 0 0000000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-Ccccc-ccChHHHHHHHHHHHHhc
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVS-HERTEEVNQALIDLIKAS 321 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~-~~~p~~~~~~i~~fl~~~ 321 (351)
......+.++++|+|+++|++|.++|++.++++.+.+. ..++++++++ ||... .++++++.+.+.+||++.
T Consensus 503 ----~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 503 ----RSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp ----TCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----cCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 01113456788999999999999999999999998872 2488999998 99987 678889999999999875
Q ss_pred C
Q 018750 322 E 322 (351)
Q Consensus 322 ~ 322 (351)
.
T Consensus 579 l 579 (582)
T 3o4h_A 579 R 579 (582)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=170.26 Aligned_cols=232 Identities=16% Similarity=0.079 Sum_probs=141.4
Q ss_pred cCCeEEEEEEcC----CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCC-CeEEEEecC
Q 018750 22 DNGIKIFYRTYG----RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA-GIEVCAFDN 93 (351)
Q Consensus 22 ~~g~~l~y~~~g----~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~ 93 (351)
.++..+.+..+. .+.|+||++||++ ++...|..++..|+. + ||.|+++|+
T Consensus 55 ~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~----------------------~~g~~v~~~d~ 112 (311)
T 2c7b_A 55 VSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSR----------------------LSDSVVVSVDY 112 (311)
T ss_dssp ETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHH----------------------HHTCEEEEECC
T ss_pred CCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChhhhHHHHHHHHH----------------------hcCCEEEEecC
Confidence 333355544432 2347899999998 888899999999986 4 899999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccCCCCCCC
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTGGGFQC 167 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~~ 167 (351)
||+|.+..+. ...+..+.++++.+.++.++. ++++|+||||||.+|+.++..+|+ +++++|+++|.....
T Consensus 113 rg~g~~~~~~--~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~-- 188 (311)
T 2c7b_A 113 RLAPEYKFPT--AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMT-- 188 (311)
T ss_dssp CCTTTSCTTH--HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCS--
T ss_pred CCCCCCCCCc--cHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCc--
Confidence 9999986543 233455556666666666676 579999999999999999998876 499999999863210
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
............ ... . ........ .+...+....... ...
T Consensus 189 --~~~~~~~~~~~~-~~~-----------~-~~~~~~~~--------------~~~~~~~~~~~~~-~~~---------- 228 (311)
T 2c7b_A 189 --GVPTASLVEFGV-AET-----------T-SLPIELMV--------------WFGRQYLKRPEEA-YDF---------- 228 (311)
T ss_dssp --SCCCHHHHHHHH-CTT-----------C-SSCHHHHH--------------HHHHHHCSSTTGG-GST----------
T ss_pred --cccccCCccHHH-hcc-----------C-CCCHHHHH--------------HHHHHhCCCCccc-cCc----------
Confidence 000000000000 000 0 00111110 0011100000000 000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHH--HHHHHHhCCCceEEEcCC-Ccccc-----ccChHHHHHHHHHHHH
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA--RRLAEKLYPVARMIDLPG-GHLVS-----HERTEEVNQALIDLIK 319 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~g-gH~~~-----~~~p~~~~~~i~~fl~ 319 (351)
........+..+. |+|+++|++|.+++.... +.+.+ ...+++++++++ +|... .+.++++.+.|.+||+
T Consensus 229 -~~~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~-~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 305 (311)
T 2c7b_A 229 -KASPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKA-SGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIR 305 (311)
T ss_dssp -TTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHH-TTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred -ccCcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHH-CCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHH
Confidence 0000001234444 999999999999874422 33333 246789999999 99776 3566899999999998
Q ss_pred hcC
Q 018750 320 ASE 322 (351)
Q Consensus 320 ~~~ 322 (351)
+..
T Consensus 306 ~~l 308 (311)
T 2c7b_A 306 SGL 308 (311)
T ss_dssp HHT
T ss_pred HHh
Confidence 754
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-21 Score=163.09 Aligned_cols=197 Identities=20% Similarity=0.143 Sum_probs=127.0
Q ss_pred cccccCCeEEEEEEc---C-CCCCeEEEEecCCCCc--cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 18 AALNDNGIKIFYRTY---G-RGPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~---g-~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
-.++.||.+|....+ + .+.|.||++||++++. ..+..+.+.|++ +||.|+++
T Consensus 34 ~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~----------------------~Gy~Vl~~ 91 (259)
T 4ao6_A 34 FSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVG----------------------RGISAMAI 91 (259)
T ss_dssp EEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHH----------------------TTEEEEEE
T ss_pred EEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHH----------------------CCCeEEee
Confidence 345678999875544 2 2446789999999874 346778888888 79999999
Q ss_pred cCCCCCCCCCCCCCC---c--------------cchHhHHHHHHHHHHH----hCCcceEEEEEchhhHHHHHHHHhCCc
Q 018750 92 DNRGMGRSSVPVKKT---E--------------YTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 92 D~~G~G~S~~~~~~~---~--------------~~~~~~~~dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
|+||||.|....... . ......+.|....++. .+.+++.++|+||||.+++.++...|
T Consensus 92 D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~p- 170 (259)
T 4ao6_A 92 DGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDK- 170 (259)
T ss_dssp CCCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCT-
T ss_pred ccCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCC-
Confidence 999999886433210 0 0112233344444433 35678999999999999999999988
Q ss_pred ccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhcc
Q 018750 151 RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG 230 (351)
Q Consensus 151 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (351)
++++.|+..+.... .
T Consensus 171 ri~Aav~~~~~~~~-------~---------------------------------------------------------- 185 (259)
T 4ao6_A 171 RIKVALLGLMGVEG-------V---------------------------------------------------------- 185 (259)
T ss_dssp TEEEEEEESCCTTS-------T----------------------------------------------------------
T ss_pred ceEEEEEecccccc-------c----------------------------------------------------------
Confidence 47776654432100 0
Q ss_pred CCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCCCccccccChHH
Q 018750 231 MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPGGHLVSHERTEE 309 (351)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~ggH~~~~~~p~~ 309 (351)
......+...+|++|+|+++|++|.++|++.++++.+.+. ++.++++++|+|... ...+
T Consensus 186 ------------------~~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G~H~~~--p~~e 245 (259)
T 4ao6_A 186 ------------------NGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPGKHSAV--PTWE 245 (259)
T ss_dssp ------------------THHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESSCTTCC--CHHH
T ss_pred ------------------cccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCCCCCCc--CHHH
Confidence 0001123456788999999999999999999999999873 456788889988543 2356
Q ss_pred HHHHHHHHHHhcC
Q 018750 310 VNQALIDLIKASE 322 (351)
Q Consensus 310 ~~~~i~~fl~~~~ 322 (351)
+.+.+.+||++.-
T Consensus 246 ~~~~~~~fl~~hL 258 (259)
T 4ao6_A 246 MFAGTVDYLDQRL 258 (259)
T ss_dssp HTHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 7788888988653
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=180.46 Aligned_cols=220 Identities=17% Similarity=0.177 Sum_probs=136.3
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.|+||++||++++. |..+...|++ +||.|+++|+||+|.+.... ..+..+++.+
T Consensus 158 ~P~Vv~~hG~~~~~--~~~~a~~La~----------------------~Gy~V~a~D~rG~g~~~~~~--~~~~~~d~~~ 211 (422)
T 3k2i_A 158 FPGIIDIFGIGGGL--LEYRASLLAG----------------------HGFATLALAYYNFEDLPNNM--DNISLEYFEE 211 (422)
T ss_dssp BCEEEEECCTTCSC--CCHHHHHHHT----------------------TTCEEEEEECSSSTTSCSSC--SCEETHHHHH
T ss_pred cCEEEEEcCCCcch--hHHHHHHHHh----------------------CCCEEEEEccCCCCCCCCCc--ccCCHHHHHH
Confidence 47899999998774 3446788887 79999999999999886554 3456677766
Q ss_pred HHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhh
Q 018750 116 DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (351)
Q Consensus 116 dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (351)
.+..+.+..+ .++++|+||||||.+|+.+|..+|+ |+++|++++............. ......
T Consensus 212 ~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~-------~~~~~~------- 276 (422)
T 3k2i_A 212 AVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKH-------SSIPPL------- 276 (422)
T ss_dssp HHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETT-------EEECCC-------
T ss_pred HHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcC-------CcCCCc-------
Confidence 6666655543 4789999999999999999999997 9999999976421110000000 000000
Q ss_pred cCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCc
Q 018750 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (351)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 273 (351)
. ...... ...... ...+.. .+ ...... ........+.++++|+|+|+|++|.
T Consensus 277 ---~--~~~~~~--~~~~~~-----~~~~~~---------~~--~~~~~~-----~~~~~~~~~~~i~~P~Lii~G~~D~ 328 (422)
T 3k2i_A 277 ---G--YDLRRI--KVAFSG-----LVDIVD---------IR--NALVGG-----YKNPSMIPIEKAQGPILLIVGQDDH 328 (422)
T ss_dssp ---C--BCGGGC--EECTTS-----CEECTT---------CB--CCCTTG-----GGSTTBCCGGGCCSCEEEEEETTCS
T ss_pred ---c--cchhhc--ccCcch-----hHHHHH---------HH--hhhhhc-----ccccccccHHHCCCCEEEEEeCCCC
Confidence 0 000000 000000 000000 00 000000 0000012356789999999999999
Q ss_pred cCCHHHH-HHHHHHh---C-CCceEEEcCC-Cccc----------------------------cccChHHHHHHHHHHHH
Q 018750 274 IAQICYA-RRLAEKL---Y-PVARMIDLPG-GHLV----------------------------SHERTEEVNQALIDLIK 319 (351)
Q Consensus 274 ~~~~~~~-~~~~~~~---~-~~~~~~~~~g-gH~~----------------------------~~~~p~~~~~~i~~fl~ 319 (351)
++|.+.. +.+.+.+ . ++.+++++++ ||.+ +.+.++++.+.|.+||+
T Consensus 329 ~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~ 408 (422)
T 3k2i_A 329 NWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFC 408 (422)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHH
Confidence 9998754 4555554 1 2378999998 9987 23557889999999998
Q ss_pred hcCCC
Q 018750 320 ASEKK 324 (351)
Q Consensus 320 ~~~~~ 324 (351)
+....
T Consensus 409 ~~L~~ 413 (422)
T 3k2i_A 409 KHLGG 413 (422)
T ss_dssp HHC--
T ss_pred HhcCC
Confidence 87543
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-21 Score=168.76 Aligned_cols=230 Identities=13% Similarity=0.060 Sum_probs=142.7
Q ss_pred cccCCeEEEEEEcC-CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 20 LNDNGIKIFYRTYG-RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 20 ~~~~g~~l~y~~~g-~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+.+|.++++...+ .+.|+||++||.+ ++...|..++..|+.. .||+|+++|+||
T Consensus 79 ~~~~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~---------------------~g~~vi~~D~r~ 137 (326)
T 3d7r_A 79 LSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKITLS---------------------TLYEVVLPIYPK 137 (326)
T ss_dssp EEETTEEEEEEESTTCCSSEEEEECCSTTTSCCCHHHHHHHHHHHHH---------------------HCSEEEEECCCC
T ss_pred EEECCEEEEEEeeCCCCCeEEEEECCCcccCCCCHHHHHHHHHHHHH---------------------hCCEEEEEeCCC
Confidence 45577887755443 4557899999955 4666788888888730 389999999998
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc----cceEEEeccCCCCCCCCCcc
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKL 171 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~ 171 (351)
.+... ....+++..+.+..+++.++.++++|+||||||.+|+.+|.++|++ ++++|+++|........+..
T Consensus 138 ~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~ 212 (326)
T 3d7r_A 138 TPEFH-----IDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDI 212 (326)
T ss_dssp TTTSC-----HHHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTC
T ss_pred CCCCC-----chHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhH
Confidence 65432 2346778888888888888889999999999999999999998877 99999999864211110000
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
.. ... ... .......+ ..+...+......... ...
T Consensus 213 ~~----~~~----------~~~----~~~~~~~~--------------~~~~~~~~~~~~~~~~-~~~------------ 247 (326)
T 3d7r_A 213 SD----ALI----------EQD----AVLSQFGV--------------NEIMKKWANGLPLTDK-RIS------------ 247 (326)
T ss_dssp CH----HHH----------HHC----SSCCHHHH--------------HHHHHHHHTTSCTTST-TTS------------
T ss_pred Hh----hhc----------ccC----cccCHHHH--------------HHHHHHhcCCCCCCCC-eEC------------
Confidence 00 000 000 00000000 0000110000000000 000
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHH--HHHHHHHHhCCCceEEEcCC-Cccccc---cChHHHHHHHHHHHHhcC
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSH---ERTEEVNQALIDLIKASE 322 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~g-gH~~~~---~~p~~~~~~i~~fl~~~~ 322 (351)
.....+.. -+|+|+++|++|..++.. ..+.+.+. ..+++++++++ ||..+. ++++++.+.|.+||++..
T Consensus 248 ~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~l~~~-~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 248 PINGTIEG-LPPVYMFGGGREMTHPDMKLFEQMMLQH-HQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp GGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHT-TCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred cccCCccc-CCCEEEEEeCcccchHHHHHHHHHHHHC-CCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 00001121 159999999999755421 22333332 46789999998 999887 888999999999998654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=186.91 Aligned_cols=217 Identities=14% Similarity=0.165 Sum_probs=146.4
Q ss_pred cccCC-eEEEEEEcCC-------CCCeEEEEecCCCCc---cchHH----HHHHhcCCCCCCCCchhhhcccccCCCCCC
Q 018750 20 LNDNG-IKIFYRTYGR-------GPTKVILITGLAGTH---DAWGP----QLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (351)
Q Consensus 20 ~~~~g-~~l~y~~~g~-------~~p~vv~~HG~~~~~---~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
...+| .++++....+ +.|+||++||.+++. ..|.. +...|++ +
T Consensus 461 ~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~----------------------~ 518 (706)
T 2z3z_A 461 MAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQ----------------------K 518 (706)
T ss_dssp ECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHH----------------------T
T ss_pred EcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHh----------------------C
Confidence 34467 7888877642 236899999987765 35654 5777876 6
Q ss_pred CeEEEEecCCCCCCCCCCCC---CCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceE
Q 018750 85 GIEVCAFDNRGMGRSSVPVK---KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l 155 (351)
||.|+++|+||+|.+..... ...+. ....+|+.++++.+ +.++++|+||||||.+++.+|.++|++++++
T Consensus 519 G~~v~~~d~rG~g~s~~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 597 (706)
T 2z3z_A 519 GYAVFTVDSRGSANRGAAFEQVIHRRLG-QTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVG 597 (706)
T ss_dssp TCEEEEECCTTCSSSCHHHHHTTTTCTT-HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEE
T ss_pred CcEEEEEecCCCcccchhHHHHHhhccC-CccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEE
Confidence 99999999999998864210 00111 22345555555444 2368999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCC
Q 018750 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (351)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (351)
|++++... +. . +...+...+........ ..+..
T Consensus 598 v~~~~~~~-------~~--~------------------------~~~~~~~~~~~~~~~~~---~~~~~----------- 630 (706)
T 2z3z_A 598 VAGGPVID-------WN--R------------------------YAIMYGERYFDAPQENP---EGYDA----------- 630 (706)
T ss_dssp EEESCCCC-------GG--G------------------------SBHHHHHHHHCCTTTCH---HHHHH-----------
T ss_pred EEcCCccc-------hH--H------------------------HHhhhhhhhcCCcccCh---hhhhh-----------
Confidence 99987531 00 0 00001111111110000 00000
Q ss_pred CcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccChHHHH
Q 018750 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVN 311 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~p~~~~ 311 (351)
......+.++++|+|+++|++|.++|++.++++.+.+ ....+++++++ ||.+..++++++.
T Consensus 631 ---------------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 695 (706)
T 2z3z_A 631 ---------------ANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLY 695 (706)
T ss_dssp ---------------HCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHH
T ss_pred ---------------CCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHH
Confidence 0112345678899999999999999999999888877 23468999998 9999888899999
Q ss_pred HHHHHHHHhc
Q 018750 312 QALIDLIKAS 321 (351)
Q Consensus 312 ~~i~~fl~~~ 321 (351)
+.|.+||++.
T Consensus 696 ~~i~~fl~~~ 705 (706)
T 2z3z_A 696 ETITRYFTDH 705 (706)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999763
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-22 Score=181.40 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=80.1
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.|+||++||++++... ..+..|++ +||.|+++|+||+|.+.... .....+++.+
T Consensus 174 ~P~Vv~lhG~~~~~~~--~~a~~La~----------------------~Gy~Vla~D~rG~~~~~~~~--~~~~~~d~~~ 227 (446)
T 3hlk_A 174 FPGIVDMFGTGGGLLE--YRASLLAG----------------------KGFAVMALAYYNYEDLPKTM--ETLHLEYFEE 227 (446)
T ss_dssp BCEEEEECCSSCSCCC--HHHHHHHT----------------------TTCEEEEECCSSSTTSCSCC--SEEEHHHHHH
T ss_pred CCEEEEECCCCcchhh--HHHHHHHh----------------------CCCEEEEeccCCCCCCCcch--hhCCHHHHHH
Confidence 3789999999886443 35788887 79999999999999886554 2456666666
Q ss_pred HHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 116 DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 116 dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
.+..+.+..+. ++++|+||||||.+|+.+|..+|+ |+++|++++..
T Consensus 228 a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~ 275 (446)
T 3hlk_A 228 AMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSV 275 (446)
T ss_dssp HHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCS
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcc
Confidence 66666655443 689999999999999999999997 99999998864
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-21 Score=168.37 Aligned_cols=221 Identities=18% Similarity=0.126 Sum_probs=128.9
Q ss_pred CCeEEEEecCCC---Ccc--chHHHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccc
Q 018750 36 PTKVILITGLAG---THD--AWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (351)
Q Consensus 36 ~p~vv~~HG~~~---~~~--~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (351)
.|+||++||.+. +.. .|..++..|+ + .||.|+++|+||++.+..+ ..
T Consensus 83 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~----------------------~g~~vv~~d~rg~~~~~~~-----~~ 135 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSAASTIFHDFCCEMAVH----------------------AGVVIASVDYRLAPEHRLP-----AA 135 (338)
T ss_dssp EEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH----------------------HTCEEEEEECCCTTTTCTT-----HH
T ss_pred ceEEEEEcCCcCcCCCCCchhHHHHHHHHHHH----------------------CCcEEEEecCCCCCCCCCc-----hH
Confidence 468999999773 223 2788888887 4 5999999999998765322 23
Q ss_pred hHhHHHHHHHHHHH--------hCCcceEEEEEchhhHHHHHHHHhCCc--------ccceEEEeccCCCCCCCCCccch
Q 018750 110 TKIMAKDVIALMDH--------LGWKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 110 ~~~~~~dl~~~l~~--------~~~~~v~lvG~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
.++..+.+..+.+. ++.++++|+||||||.+|+.+|.++|+ +|+++|++++........
T Consensus 136 ~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~----- 210 (338)
T 2o7r_A 136 YDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRT----- 210 (338)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCC-----
T ss_pred HHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCC-----
Confidence 34444444443332 233689999999999999999999888 899999999864221100
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
.. ..... .......... ..+..................+.. ......
T Consensus 211 --~~-~~~~~------------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 257 (338)
T 2o7r_A 211 --GS-ELRLA------------NDSRLPTFVL--------------DLIWELSLPMGADRDHEYCNPTAE----SEPLYS 257 (338)
T ss_dssp --HH-HHHTT------------TCSSSCHHHH--------------HHHHHHHSCTTCCTTSTTTCCC--------CCTH
T ss_pred --hh-hhccC------------CCcccCHHHH--------------HHHHHHhCCCCCCCCCcccCCCCC----Cccccc
Confidence 00 00000 0000000000 000110000000000000000000 000002
Q ss_pred HHHhhccCccEEEEeecCCccCCHH--HHHHHHHHhCCCceEEEcCC-CccccccCh---HHHHHHHHHHHHhcC
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKASE 322 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p---~~~~~~i~~fl~~~~ 322 (351)
.+.+..+++|+|+++|++|.+++.. ..+.+.+. .++++++++++ ||.++.+++ +++.+.|.+||++..
T Consensus 258 ~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 258 FDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKK-GVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHT-TCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHC-CCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 3456667789999999999998743 23333332 35789999998 998888776 889999999997653
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-22 Score=164.11 Aligned_cols=185 Identities=17% Similarity=0.125 Sum_probs=133.6
Q ss_pred CCeEEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC-
Q 018750 23 NGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR- 98 (351)
Q Consensus 23 ~g~~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~- 98 (351)
++..++|....+ ++|+||++||++++...|..+.+.|.+ +|.|+++|.+++..
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~-----------------------~~~vv~~d~~~~~~~ 70 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-----------------------TATLVAARGRIPQED 70 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-----------------------TSEEEEECCSEEETT
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcCC-----------------------CceEEEeCCCCCcCC
Confidence 355566655542 457899999999999999999999986 99999999887421
Q ss_pred --CCCCC--C--CCccchHhHHHHHHHHHHHh----CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 99 --SSVPV--K--KTEYTTKIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 99 --S~~~~--~--~~~~~~~~~~~dl~~~l~~~----~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
+.... . ....++.+.++++.++++.+ +. ++++++||||||.+|+.++.++|++++++|++++.....
T Consensus 71 g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~- 149 (223)
T 3b5e_A 71 GFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD- 149 (223)
T ss_dssp EEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-
T ss_pred ccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc-
Confidence 11000 0 01234556666777666654 43 789999999999999999999999999999999753100
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
..
T Consensus 150 --------------------------------------------~~---------------------------------- 151 (223)
T 3b5e_A 150 --------------------------------------------HV---------------------------------- 151 (223)
T ss_dssp --------------------------------------------SC----------------------------------
T ss_pred --------------------------------------------cc----------------------------------
Confidence 00
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCCCccccccChHHHHHHHHHHHHhcC
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
.....+++|+++++|++|.++|.+.++ +.+.+.. +.+++++++||....+. .+.+.+||++..
T Consensus 152 --------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~~gH~~~~~~----~~~i~~~l~~~~ 217 (223)
T 3b5e_A 152 --------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIPSGHDIGDPD----AAIVRQWLAGPI 217 (223)
T ss_dssp --------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEESCCSCCCHHH----HHHHHHHHHCC-
T ss_pred --------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEecCCCCcCHHH----HHHHHHHHHhhh
Confidence 001234689999999999999999888 8776622 57888899899886443 357888887643
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=167.43 Aligned_cols=215 Identities=13% Similarity=0.098 Sum_probs=135.2
Q ss_pred CCCeEEEEecCC---CCccchHHHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 35 GPTKVILITGLA---GTHDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 35 ~~p~vv~~HG~~---~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
+.|+||++||++ ++...|..+...|+ . .||.|+++|+||+|.+..+. ...+.
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~----------------------~g~~Vv~~dyrg~g~~~~p~--~~~d~ 133 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARL----------------------SNSTVVSVDYRLAPEHKFPA--AVYDC 133 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHH----------------------HTSEEEEEECCCTTTSCTTH--HHHHH
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHH----------------------hCCEEEEecCCCCCCCCCCC--cHHHH
Confidence 447899999998 78888999999998 3 49999999999999997554 23456
Q ss_pred HhHHHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHhCCcc----cceEEEeccCCCCCCCCCccchhhhHHHHhhcc
Q 018750 111 KIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (351)
Q Consensus 111 ~~~~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (351)
.+.++++.+.++.++.+ +++|+|||+||.+|+.++.++|++ ++++|+++|...... .... ......
T Consensus 134 ~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~-----~~~~---~~~~~~ 205 (311)
T 1jji_A 134 YDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVA-----PTPS---LLEFGE 205 (311)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSS-----CCHH---HHHTSS
T ss_pred HHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCC-----CCcc---HHHhcC
Confidence 66667777777777765 899999999999999999988776 999999998642110 0000 000000
Q ss_pred cCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccE
Q 018750 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (351)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (351)
... .........+...+...... ...... . .....+..+ .|+
T Consensus 206 ~~~-------~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-----------~-p~~~~l~~~-~P~ 247 (311)
T 1jji_A 206 GLW-------ILDQKIMSWFSEQYFSREED------------------KFNPLA-----------S-VIFADLENL-PPA 247 (311)
T ss_dssp SCS-------SCCHHHHHHHHHHHCSSGGG------------------GGCTTT-----------S-GGGSCCTTC-CCE
T ss_pred CCc-------cCCHHHHHHHHHHhCCCCcc------------------CCCccc-----------C-cccccccCC-Chh
Confidence 000 00000000011111111000 000000 0 000122333 499
Q ss_pred EEEeecCCccCCHH--HHHHHHHHhCCCceEEEcCC-Ccccccc-----ChHHHHHHHHHHHHh
Q 018750 265 SVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSHE-----RTEEVNQALIDLIKA 320 (351)
Q Consensus 265 lii~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~g-gH~~~~~-----~p~~~~~~i~~fl~~ 320 (351)
++++|++|.+++.. .++.+.+. ..++++++++| +|..... ..+++.+.+.+||++
T Consensus 248 li~~G~~D~l~~~~~~~~~~l~~~-g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 248 LIITAEYDPLRDEGEVFGQMLRRA-GVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHT-TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred eEEEcCcCcchHHHHHHHHHHHHc-CCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99999999998632 23444442 46789999999 9977643 457889999999975
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-21 Score=185.01 Aligned_cols=217 Identities=18% Similarity=0.184 Sum_probs=147.6
Q ss_pred ccCC-eEEEEEEcCC-------CCCeEEEEecCCCCc---cchH-----HHHHHhcCCCCCCCCchhhhcccccCCCCCC
Q 018750 21 NDNG-IKIFYRTYGR-------GPTKVILITGLAGTH---DAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (351)
Q Consensus 21 ~~~g-~~l~y~~~g~-------~~p~vv~~HG~~~~~---~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
..+| .++++..+.+ +.|+||++||++++. ..|. .+...|++ +
T Consensus 494 ~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~ 551 (741)
T 2ecf_A 494 AADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQ----------------------Q 551 (741)
T ss_dssp CTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHH----------------------T
T ss_pred cCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHh----------------------C
Confidence 4478 8999887643 236799999998774 3465 67888876 6
Q ss_pred CeEEEEecCCCCCCCCCCCC------CCccchHhHHHHHHHHHHH--hCCcceEEEEEchhhHHHHHHHHhCCcccceEE
Q 018750 85 GIEVCAFDNRGMGRSSVPVK------KTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLA 156 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~dl~~~l~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lv 156 (351)
||.|+++|+||+|.|..... ......+++.+.+..+.+. ++.++++++||||||.+++.++.++|++++++|
T Consensus 552 G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 631 (741)
T 2ecf_A 552 GYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGV 631 (741)
T ss_dssp TCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEE
T ss_pred CCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEE
Confidence 99999999999999753210 0012234444444333332 133689999999999999999999999999999
Q ss_pred EeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCC
Q 018750 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (351)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (351)
++++... .. .. ...+...+........ ..+..
T Consensus 632 ~~~~~~~-------~~--~~------------------------~~~~~~~~~~~~~~~~---~~~~~------------ 663 (741)
T 2ecf_A 632 AGAPVTD-------WG--LY------------------------DSHYTERYMDLPARND---AGYRE------------ 663 (741)
T ss_dssp EESCCCC-------GG--GS------------------------BHHHHHHHHCCTGGGH---HHHHH------------
T ss_pred EcCCCcc-------hh--hh------------------------ccccchhhcCCcccCh---hhhhh------------
Confidence 9997631 00 00 0001111111110000 00000
Q ss_pred cchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccChHHHHH
Q 018750 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQ 312 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p~~~~~ 312 (351)
.+....+.++++|+|+++|++|.+++++.++.+.+.+. ...+++++++ ||..+.+.++++.+
T Consensus 664 --------------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (741)
T 2ecf_A 664 --------------ARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYR 729 (741)
T ss_dssp --------------HCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHH
T ss_pred --------------cCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHH
Confidence 01113456788999999999999999999999988772 2358999998 99998888899999
Q ss_pred HHHHHHHhc
Q 018750 313 ALIDLIKAS 321 (351)
Q Consensus 313 ~i~~fl~~~ 321 (351)
.|.+||++.
T Consensus 730 ~i~~fl~~~ 738 (741)
T 2ecf_A 730 VAEAFLGRC 738 (741)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-20 Score=179.48 Aligned_cols=226 Identities=17% Similarity=0.161 Sum_probs=154.5
Q ss_pred cCCeEEEEEEcC-----------CCCCeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 22 DNGIKIFYRTYG-----------RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 22 ~~g~~l~y~~~g-----------~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
.+|.++++..+. .+.|+||++||++++.. .|..+...|++ +||.|
T Consensus 399 ~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~G~~v 456 (662)
T 3azo_A 399 PDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTS----------------------RGIGV 456 (662)
T ss_dssp TTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHT----------------------TTCEE
T ss_pred CCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHh----------------------CCCEE
Confidence 478788766542 23478999999987765 78888899988 79999
Q ss_pred EEecCCC---CCCCCCCC---CCCccchHhHHHHHHHHHHH--hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 89 CAFDNRG---MGRSSVPV---KKTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 89 i~~D~~G---~G~S~~~~---~~~~~~~~~~~~dl~~~l~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+++|+|| +|.+.... .....+++++.+.+..+++. ++.++++|+||||||.+++.++.. |++++++|++++
T Consensus 457 ~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~ 535 (662)
T 3azo_A 457 ADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYP 535 (662)
T ss_dssp EEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESC
T ss_pred EEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCC
Confidence 9999999 77664211 11234678888888888877 455799999999999999998886 999999999987
Q ss_pred CCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
.. +.... .. .... .+...+...+++..... .+.+..
T Consensus 536 ~~---------~~~~~---~~--~~~~-----------~~~~~~~~~~~~~~~~~---~~~~~~---------------- 571 (662)
T 3azo_A 536 VL---------DLLGW---AD--GGTH-----------DFESRYLDFLIGSFEEF---PERYRD---------------- 571 (662)
T ss_dssp CC---------CHHHH---HT--TCSC-----------GGGTTHHHHHTCCTTTC---HHHHHH----------------
T ss_pred cc---------CHHHH---hc--cccc-----------chhhHhHHHHhCCCccc---hhHHHh----------------
Confidence 52 11000 00 0000 00001111112111100 000000
Q ss_pred hhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCC-Ccccc-ccChHHHHHHHH
Q 018750 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPG-GHLVS-HERTEEVNQALI 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~-~~~p~~~~~~i~ 315 (351)
......+.++++|+|+++|++|.++|++.++++.+.+.. ..+++++++ ||.+. .++++++.+.+.
T Consensus 572 ----------~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 641 (662)
T 3azo_A 572 ----------RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAEL 641 (662)
T ss_dssp ----------TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHH
T ss_pred ----------hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHH
Confidence 011234577889999999999999999999999998832 348899998 99764 467789999999
Q ss_pred HHHHhcCCC
Q 018750 316 DLIKASEKK 324 (351)
Q Consensus 316 ~fl~~~~~~ 324 (351)
+||.+....
T Consensus 642 ~fl~~~l~~ 650 (662)
T 3azo_A 642 SLYAQVFGV 650 (662)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhCC
Confidence 999887543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-22 Score=173.26 Aligned_cols=223 Identities=11% Similarity=0.052 Sum_probs=144.0
Q ss_pred cCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 32 YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 32 ~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
.|++ |+|||+||++++...|..+.+.|.. +|+|+++|+||+|.+... ..+++
T Consensus 98 ~g~~-~~l~~lhg~~~~~~~~~~l~~~L~~-----------------------~~~v~~~d~~g~~~~~~~----~~~~~ 149 (329)
T 3tej_A 98 EGNG-PTLFCFHPASGFAWQFSVLSRYLDP-----------------------QWSIIGIQSPRPNGPMQT----AANLD 149 (329)
T ss_dssp CCSS-CEEEEECCTTSCCGGGGGGGGTSCT-----------------------TCEEEEECCCTTTSHHHH----CSSHH
T ss_pred CCCC-CcEEEEeCCcccchHHHHHHHhcCC-----------------------CCeEEEeeCCCCCCCCCC----CCCHH
Confidence 3444 5699999999999999999999976 999999999999987533 33789
Q ss_pred hHHHHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHh---CCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCC
Q 018750 112 IMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT 187 (351)
Q Consensus 112 ~~~~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (351)
++++++.+.+..+ +.++++|+||||||.+|+.+|.+ +|++|.++|++++..+.. ..........+ .
T Consensus 150 ~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~-------~~~~~~~~~~~---~ 219 (329)
T 3tej_A 150 EVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPET-------QNWQEKEANGL---D 219 (329)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHH-------HHTC-----CC---C
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCc-------ccccccccccc---C
Confidence 9999988888776 55799999999999999999999 999999999999864210 00000000000 0
Q ss_pred HHHHhhcCccccccHHHHHHhhcC--CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 188 PEKRAAVDLDTHYSQEYLEEYVGS--STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
...... . ......+... ..........+...+... .... . ......+++|++
T Consensus 220 ~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~-------~~~~~~~~~pv~ 273 (329)
T 3tej_A 220 PEVLAE------I-NREREAFLAAQQGSTSTELFTTIEGNYADA-----------VRLL-T-------TAHSVPFDGKAT 273 (329)
T ss_dssp CTHHHH------H-HHHHHHHHHTTCCCSCCHHHHHHHHHHHHH-----------HHHH-T-------TCCCCCEEEEEE
T ss_pred hhhHHH------H-HHHHHHHHHhccccccHHHHHHHHHHHHHH-----------HHHH-h-------cCCCCCcCCCeE
Confidence 000000 0 0000000000 000000111111100000 0000 0 001245679999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccCh--HHHHHHHHHHHH
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT--EEVNQALIDLIK 319 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p--~~~~~~i~~fl~ 319 (351)
++.|++|...+......+.+.. ++.+++.++|||+.+++.+ +++++.|.+||+
T Consensus 274 l~~~~~d~~~~~~~~~~w~~~~-~~~~~~~v~g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 274 LFVAERTLQEGMSPERAWSPWI-AELDIYRQDCAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp EEEEGGGCCTTCCHHHHHTTTE-EEEEEEEESSCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred EEEeccCCCCCCCchhhHHHhc-CCcEEEEecCChHHhCCChHHHHHHHHHHHHhc
Confidence 9999999887766666666654 7889999999999888876 889999999985
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-20 Score=166.42 Aligned_cols=213 Identities=15% Similarity=0.093 Sum_probs=130.6
Q ss_pred CCeEEEEecCCC---Cccc--hHHHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccc
Q 018750 36 PTKVILITGLAG---THDA--WGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (351)
Q Consensus 36 ~p~vv~~HG~~~---~~~~--~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (351)
.|+||++||.+. +... |..++..|+ + .||.|+++|+||.+.+..+ ..
T Consensus 113 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~----------------------~g~~vv~~d~rg~~~~~~~-----~~ 165 (351)
T 2zsh_A 113 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGL----------------------CKCVVVSVNYRRAPENPYP-----CA 165 (351)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH----------------------HTSEEEEECCCCTTTSCTT-----HH
T ss_pred ceEEEEECCCcCcCCCCcchhHHHHHHHHHHH----------------------cCCEEEEecCCCCCCCCCc-----hh
Confidence 468999999653 3333 788888888 4 5999999999998766422 24
Q ss_pred hHhHHHHHHHHHHH------hCCc-ceEEEEEchhhHHHHHHHHhCCc---ccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 110 TKIMAKDVIALMDH------LGWK-QAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 110 ~~~~~~dl~~~l~~------~~~~-~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++|..+.+..+.+. ++.+ +++|+||||||.+|+.+|.++|+ +++++|+++|....... ... .
T Consensus 166 ~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~-----~~~---~ 237 (351)
T 2zsh_A 166 YDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNER-----TES---E 237 (351)
T ss_dssp HHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSC-----CHH---H
T ss_pred HHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcC-----Chh---h
Confidence 55555555555543 3456 89999999999999999999988 89999999876421110 000 0
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
..... ......... ..+...+.............. . ......+.+
T Consensus 238 ~~~~~------------~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~l~~ 282 (351)
T 2zsh_A 238 KSLDG------------KYFVTVRDR--------------DWYWKAFLPEGEDREHPACNP--------F-SPRGKSLEG 282 (351)
T ss_dssp HHHTT------------TSSCCHHHH--------------HHHHHHHSCTTCCTTSTTTCT--------T-STTSCCCTT
T ss_pred hhcCC------------CcccCHHHH--------------HHHHHHhCCCCCCCCCcccCC--------C-CCCccchhh
Confidence 00000 000000000 011111110000000000000 0 000123455
Q ss_pred cCc-cEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc----cChHHHHHHHHHHHHh
Q 018750 260 AGF-LVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH----ERTEEVNQALIDLIKA 320 (351)
Q Consensus 260 i~~-Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~----~~p~~~~~~i~~fl~~ 320 (351)
+++ |+|+++|++|.+++. .+.+.+.+ ..+++++++++ ||..+. ++++++.+.|.+||++
T Consensus 283 i~~pP~Lii~G~~D~~~~~--~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 283 VSFPKSLVVVAGLDLIRDW--QLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp CCCCEEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEcCCCcchHH--HHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 666 999999999998873 33344333 34789999998 998877 7899999999999975
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-19 Score=158.65 Aligned_cols=231 Identities=14% Similarity=0.058 Sum_probs=142.4
Q ss_pred cccccCCeEEEEEEcCC-CCCe-EEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 18 AALNDNGIKIFYRTYGR-GPTK-VILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~-vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
..++.+|.++ |...+. +.|+ ||++||.+ ++...|..++..|+.. .||.|+++|
T Consensus 61 ~~~~~~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~d 118 (322)
T 3k6k_A 61 TLTDLGGVPC-IRQATDGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQ---------------------SSATLWSLD 118 (322)
T ss_dssp EEEEETTEEE-EEEECTTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHH---------------------HTCEEEEEC
T ss_pred EEEEECCEeE-EecCCCCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHh---------------------cCCEEEEee
Confidence 3456688888 665553 3456 99999976 6777888888888750 299999999
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHH-hCCcceEEEEEchhhHHHHHHHHhCCcc----cceEEEeccCCCCCCC
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDH-LGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQC 167 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~ 167 (351)
+|+++.+..+ ..+++..+.+..+++. ++.++++|+|||+||.+|+.++...+++ ++++|+++|.......
T Consensus 119 yr~~~~~~~~-----~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 193 (322)
T 3k6k_A 119 YRLAPENPFP-----AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLS 193 (322)
T ss_dssp CCCTTTSCTT-----HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCC
T ss_pred CCCCCCCCCc-----hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccC
Confidence 9998876432 3456666666666666 4567999999999999999999988776 9999999986321100
Q ss_pred CCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
.... ..............+ ..+...+......... ....
T Consensus 194 -----~~~~--------------~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-~~sp------- 232 (322)
T 3k6k_A 194 -----RWSN--------------SNLADRDFLAEPDTL--------------GEMSELYVGGEDRKNP-LISP------- 232 (322)
T ss_dssp -----SHHH--------------HHTGGGCSSSCHHHH--------------HHHHHHHHTTSCTTCT-TTCG-------
T ss_pred -----ccch--------------hhccCCCCcCCHHHH--------------HHHHHHhcCCCCCCCC-cCCc-------
Confidence 0000 000000000011111 1111111100000000 0000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-----cChHHHHHHHHHHH
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLI 318 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-----~~p~~~~~~i~~fl 318 (351)
....+ ....|+|+++|++|.++ ..++.+.+.+ ...++++++++ +|.... +.++++.+.|.+||
T Consensus 233 -----~~~~~-~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl 304 (322)
T 3k6k_A 233 -----VYADL-SGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWI 304 (322)
T ss_dssp -----GGSCC-TTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred -----ccccc-cCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHH
Confidence 00011 12259999999999985 3455555444 34679999999 997654 45789999999999
Q ss_pred HhcCCC
Q 018750 319 KASEKK 324 (351)
Q Consensus 319 ~~~~~~ 324 (351)
++....
T Consensus 305 ~~~l~~ 310 (322)
T 3k6k_A 305 SARISK 310 (322)
T ss_dssp HTTCC-
T ss_pred HHHHhc
Confidence 987543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-20 Score=153.42 Aligned_cols=204 Identities=16% Similarity=0.143 Sum_probs=132.7
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe--EEEEecCCCCCCCCCCC----------
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI--EVCAFDNRGMGRSSVPV---------- 103 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~--~vi~~D~~G~G~S~~~~---------- 103 (351)
.++|||+||++++...|..+++.|.+ +|+ +|+.+|.+++|.+....
T Consensus 6 ~~pvvliHG~~~~~~~~~~l~~~L~~----------------------~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~ 63 (249)
T 3fle_A 6 TTATLFLHGYGGSERSETFMVKQALN----------------------KNVTNEVITARVSSEGKVYFDKKLSEDAANPI 63 (249)
T ss_dssp CEEEEEECCTTCCGGGTHHHHHHHHT----------------------TTSCSCEEEEEECSSCCEEESSCCC--CCSCE
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHH----------------------cCCCceEEEEEECCCCCEEEccccccccCCCe
Confidence 45799999999999999999999998 565 79999999998752110
Q ss_pred ------CCCccchHhHHHHHHHHHHH----hCCcceEEEEEchhhHHHHHHHHhCCc-----ccceEEEeccCCCCCCCC
Q 018750 104 ------KKTEYTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 104 ------~~~~~~~~~~~~dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~ 168 (351)
.....++.++++++.++++. ++.+++++|||||||.+++.++.++|+ +|+++|+++++..+....
T Consensus 64 i~v~f~~n~~~~~~~~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~ 143 (249)
T 3fle_A 64 VKVEFKDNKNGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNM 143 (249)
T ss_dssp EEEEESSTTCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTT
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccc
Confidence 00122344556666555544 478899999999999999999999874 799999999874332110
Q ss_pred CccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
... ... ... . . .+........++.
T Consensus 144 ~~~----------------~~~-~~~------~-----~-~g~p~~~~~~~~~--------------------------- 167 (249)
T 3fle_A 144 NEN----------------VNE-IIV------D-----K-QGKPSRMNAAYRQ--------------------------- 167 (249)
T ss_dssp SSC----------------TTT-SCB------C-----T-TCCBSSCCHHHHH---------------------------
T ss_pred cCC----------------cch-hhh------c-----c-cCCCcccCHHHHH---------------------------
Confidence 000 000 000 0 0 0000000000000
Q ss_pred CCHHHHHHhhccCccEEEEeec------CCccCCHHHHHHHHHHhCCC---ceEEEcC--C-CccccccChHHHHHHHHH
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYPV---ARMIDLP--G-GHLVSHERTEEVNQALID 316 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~--g-gH~~~~~~p~~~~~~i~~ 316 (351)
+ ......++..++|||.|+|+ .|.+||...++.+...+... .+.+++. . .|....+++ +|.+.|.+
T Consensus 168 l-~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~ 245 (249)
T 3fle_A 168 L-LSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQ 245 (249)
T ss_dssp T-GGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHH
T ss_pred H-HHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHH
Confidence 0 01124455567899999998 79999998887766544222 2334443 3 699988887 99999999
Q ss_pred HHH
Q 018750 317 LIK 319 (351)
Q Consensus 317 fl~ 319 (351)
||-
T Consensus 246 FLw 248 (249)
T 3fle_A 246 FLW 248 (249)
T ss_dssp HHT
T ss_pred Hhc
Confidence 983
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-20 Score=160.92 Aligned_cols=212 Identities=11% Similarity=0.032 Sum_probs=128.3
Q ss_pred CCCeEEEEecC---CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
+.|+||++||. .++...|..++..|++. .||.|+++|+||+|.+..+. ..+
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~---------------------~g~~Vv~~Dyrg~~~~~~p~-----~~~ 142 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITNS---------------------CQCVTISVDYRLAPENKFPA-----AVV 142 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEEECCCCTTTSCTTH-----HHH
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHHh---------------------cCCEEEEecCCCCCCCCCcc-----hHH
Confidence 45789999994 47888899999999850 28999999999999875432 344
Q ss_pred hHHHHHHHHHHH---h-CCcceEEEEEchhhHHHHHHHHhCCccc---ceEEEeccCCCCCCCCCccchhhhHHHHhhcc
Q 018750 112 IMAKDVIALMDH---L-GWKQAHVFGHSMGAMIACKLAAMVPERV---LSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (351)
Q Consensus 112 ~~~~dl~~~l~~---~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (351)
+..+.+..+.+. + +.++++|+||||||.+|+.+|.++|+++ +++|+++|...... ...... ....
T Consensus 143 d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~-----~~~~~~---~~~~ 214 (323)
T 3ain_A 143 DSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDL-----ITKSLY---DNGE 214 (323)
T ss_dssp HHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCS-----CCHHHH---HHSS
T ss_pred HHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCC-----CCccHH---Hhcc
Confidence 444444444433 3 4578999999999999999999988876 89999987632110 000000 0000
Q ss_pred cCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccE
Q 018750 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (351)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (351)
........+. .+...+........... ... ....+..+ .|+
T Consensus 215 ------------~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~-----------~sp-~~~~l~~l-~P~ 255 (323)
T 3ain_A 215 ------------GFFLTREHID--------------WFGQQYLRSFADLLDFR-----------FSP-ILADLNDL-PPA 255 (323)
T ss_dssp ------------SSSSCHHHHH--------------HHHHHHCSSGGGGGCTT-----------TCG-GGSCCTTC-CCE
T ss_pred ------------CCCCCHHHHH--------------HHHHHhCCCCcccCCcc-----------cCc-ccCcccCC-CHH
Confidence 0000111110 01110000000000000 000 00012333 399
Q ss_pred EEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-----cChHHHHHHHHHHHHhc
Q 018750 265 SVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIKAS 321 (351)
Q Consensus 265 lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-----~~p~~~~~~i~~fl~~~ 321 (351)
|+++|++|.+++ ..+.+.+.+ ..+++++++++ +|.... +.++++.+.|.+||++.
T Consensus 256 lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 256 LIITAEHDPLRD--QGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp EEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred HEEECCCCccHH--HHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 999999999885 333343333 35689999999 998775 45689999999999864
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-20 Score=161.39 Aligned_cols=104 Identities=19% Similarity=0.120 Sum_probs=80.1
Q ss_pred CCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 36 PTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 36 ~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
.|+||++||++ ++...|..++..|+.. .||.|+++|+||+|.+..+. ...+..+
T Consensus 79 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~G~~Vv~~d~rg~~~~~~~~--~~~d~~~ 135 (323)
T 1lzl_A 79 VPVLLWIHGGGFAIGTAESSDPFCVEVARE---------------------LGFAVANVEYRLAPETTFPG--PVNDCYA 135 (323)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHHHH---------------------HCCEEEEECCCCTTTSCTTH--HHHHHHH
T ss_pred CcEEEEECCCccccCChhhhHHHHHHHHHh---------------------cCcEEEEecCCCCCCCCCCc--hHHHHHH
Confidence 46899999998 7888888888888750 28999999999999986443 1223344
Q ss_pred HHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccCC
Q 018750 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTG 162 (351)
Q Consensus 113 ~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 162 (351)
.++.+.+.++.++. ++++|+||||||.+|+.++.++++ .++++|+++|..
T Consensus 136 ~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 191 (323)
T 1lzl_A 136 ALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPEL 191 (323)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCC
T ss_pred HHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCcc
Confidence 44444444455665 589999999999999999988776 499999999763
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-20 Score=164.53 Aligned_cols=225 Identities=14% Similarity=-0.033 Sum_probs=134.6
Q ss_pred CCeEEEEecCC---CCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 36 PTKVILITGLA---GTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 36 ~p~vv~~HG~~---~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
.|+||++||.+ ++.. .|..+...|++ +||.|+++|+||+|.|+.... ....+
T Consensus 109 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~----------------------~g~~vv~~d~r~~gg~~~~~~-~~~~~ 165 (361)
T 1jkm_A 109 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAA----------------------AGSVVVMVDFRNAWTAEGHHP-FPSGV 165 (361)
T ss_dssp EEEEEEECCSTTTSSCSSSHHHHHHHHHHHH----------------------TTCEEEEEECCCSEETTEECC-TTHHH
T ss_pred CeEEEEEcCCccccCCCcccchhHHHHHHHh----------------------CCCEEEEEecCCCCCCCCCCC-CCccH
Confidence 37899999987 7777 78888999986 599999999999976542211 22233
Q ss_pred HhH---HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh-----CCcccceEEEeccCCCCCCCCCccchhhhHHHHhh
Q 018750 111 KIM---AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-----VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (351)
Q Consensus 111 ~~~---~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (351)
.+. ++++.+.++.++.++++|+|||+||.+++.++.. +|++++++|++++....... .........
T Consensus 166 ~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~---~~~~~~~~~--- 239 (361)
T 1jkm_A 166 EDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYA---WDHERRLTE--- 239 (361)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTT---SCHHHHHHH---
T ss_pred HHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccc---ccccccccc---
Confidence 333 4445555556677899999999999999999998 88899999999986422100 000000000
Q ss_pred cccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCc
Q 018750 183 FRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (351)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (351)
.. ..... ....... .....+...+..........+... .......+..+.
T Consensus 240 ---~~-~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~l~~l~- 289 (361)
T 1jkm_A 240 ---LP-SLVEN--DGYFIEN--------------GGMALLVRAYDPTGEHAEDPIAWP---------YFASEDELRGLP- 289 (361)
T ss_dssp ---CT-HHHHT--TTSSSCH--------------HHHHHHHHHHSSSSTTTTCTTTCG---------GGCCHHHHTTCC-
T ss_pred ---Cc-chhhc--cCcccCH--------------HHHHHHHHHhCCCCCCCCCcccCc---------cccChhhHcCCC-
Confidence 00 00000 0000000 111111111111000000000000 000123456666
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Ccccc-c-----cCh-HHHHHHHHHHHHhc
Q 018750 263 LVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-H-----ERT-EEVNQALIDLIKAS 321 (351)
Q Consensus 263 Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~-~-----~~p-~~~~~~i~~fl~~~ 321 (351)
|+|+++|++|.+++ .++.+.+.+ ..+++++++++ +|... . +.+ +++.+.|.+||++.
T Consensus 290 P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 290 PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 99999999999987 445555544 34579999998 99876 3 344 88999999999864
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=152.88 Aligned_cols=176 Identities=15% Similarity=0.079 Sum_probs=122.1
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC----CCCccch
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV----KKTEYTT 110 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~ 110 (351)
.+++|||+||++++...|..+.+.|.. .++.|+++|.+|++.-+... ......+
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~~----------------------~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~ 78 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLKL----------------------DEMAIYAPQATNNSWYPYSFMAPVQQNQPAL 78 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSSC----------------------TTEEEEEECCGGGCSSSSCTTSCGGGGTTHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhCC----------------------CCeEEEeecCCCCCccccccCCCcccchHHH
Confidence 456899999999998888777777765 69999999999876422111 1011234
Q ss_pred HhHHHHHHHHHHH---hC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhccc
Q 018750 111 KIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (351)
Q Consensus 111 ~~~~~dl~~~l~~---~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (351)
++..+.+..+++. .+ .++++|+|+|+||.+++.++.++|+++.++|.+++........
T Consensus 79 ~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~----------------- 141 (210)
T 4h0c_A 79 DSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA----------------- 141 (210)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC-----------------
T ss_pred HHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh-----------------
Confidence 4444445444443 33 3589999999999999999999999999999998642100000
Q ss_pred CCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
.. . . .-...++|++
T Consensus 142 -----------------------------~~----~---------------------------~------~~~~~~~Pvl 155 (210)
T 4h0c_A 142 -----------------------------IG----N---------------------------Y------KGDFKQTPVF 155 (210)
T ss_dssp -----------------------------GG----G---------------------------C------CBCCTTCEEE
T ss_pred -----------------------------hh----h---------------------------h------hhhccCCceE
Confidence 00 0 0 0011236999
Q ss_pred EEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 266 VIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
++||++|+++|.+..+++.+.+ ..+.+++++++ ||.+. +++ .+.|.+||.
T Consensus 156 ~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~e-l~~i~~wL~ 209 (210)
T 4h0c_A 156 ISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS---GDE-IQLVNNTIL 209 (210)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHH-HHHHHHTTT
T ss_pred EEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHH-HHHHHHHHc
Confidence 9999999999999988887766 24578899998 99764 334 356777764
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=163.89 Aligned_cols=212 Identities=13% Similarity=0.143 Sum_probs=140.3
Q ss_pred eEEEEec--CCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC-CCCCccchHhHH
Q 018750 38 KVILITG--LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP-VKKTEYTTKIMA 114 (351)
Q Consensus 38 ~vv~~HG--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~ 114 (351)
+|+|+|| ++++...|..+...|.. +++|+++|+||+|.+... ......++++++
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~-----------------------~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a 147 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQE-----------------------ERDFLAVPLPGYGTGTGTGTALLPADLDTAL 147 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTT-----------------------TCCEEEECCTTCCBC---CBCCEESSHHHHH
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCC-----------------------CCceEEecCCCCCCCcccccCCCCCCHHHHH
Confidence 7999998 67888899999999886 899999999999997210 011356899999
Q ss_pred HHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHhCC----cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHH
Q 018750 115 KDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (351)
Q Consensus 115 ~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
+++.+.++.+ +.++++|+||||||.+|+.+|.+.+ ++|+++|++++..... . .... .++..
T Consensus 148 ~~~~~~i~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~------~-~~~~---~~~~~---- 213 (319)
T 2hfk_A 148 DAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGH------Q-EPIE---VWSRQ---- 213 (319)
T ss_dssp HHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTS------C-HHHH---HTHHH----
T ss_pred HHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCc------h-hHHH---HHHHH----
Confidence 9999998877 4578999999999999999998874 5699999999864211 0 0000 00000
Q ss_pred HHhhcCccccccHHHHHHhhcCCchhh-hhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 190 KRAAVDLDTHYSQEYLEEYVGSSTRRA-ILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
.....+........... .....+... + . . .....+++|+++++
T Consensus 214 ----------l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~-~------~~~~~i~~Pvl~i~ 257 (319)
T 2hfk_A 214 ----------LGEGLFAGELEPMSDARLLAMGRYARF---------------L----A-G------PRPGRSSAPVLLVR 257 (319)
T ss_dssp ----------HHHHHHHTCSSCCCHHHHHHHHHHHHH---------------H----H-S------CCCCCCCSCEEEEE
T ss_pred ----------hhHHHHHhhccccchHHHHHHHHHHHH---------------H----H-h------CCCCCcCCCEEEEE
Confidence 00001100000000000 000000000 0 0 0 01356889999999
Q ss_pred ecCCccCCHHH-HHHHHHHhCCCceEEEcCCCccccc-cChHHHHHHHHHHHHhcCC
Q 018750 269 GRHDVIAQICY-ARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 269 g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~ggH~~~~-~~p~~~~~~i~~fl~~~~~ 323 (351)
| +|.+++... ...+.+.+.++.+++.+++||+.++ ++++++++.|.+||.+...
T Consensus 258 g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~g~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 258 A-SEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp E-SSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred c-CCCCCCccccccchhhcCCCCCEEEEeCCCcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 9 999888665 4445554434678999999999755 7999999999999987543
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.2e-21 Score=163.32 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=82.0
Q ss_pred CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
+.+.++|||+||++++...|..+.+.|. ++|+++|+++.. ..+++++
T Consensus 21 ~~~~~~l~~~hg~~~~~~~~~~~~~~L~-------------------------~~v~~~d~~~~~--------~~~~~~~ 67 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGSTTVFHSLASRLS-------------------------IPTYGLQCTRAA--------PLDSIHS 67 (283)
T ss_dssp CSSSCCEEEECCTTCCSGGGHHHHHHCS-------------------------SCEEEECCCTTS--------CCSCHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHhcC-------------------------ceEEEEecCCCC--------CCCCHHH
Confidence 3345679999999999999999988772 689999996411 2458999
Q ss_pred HHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhC---Ccccc---eEEEeccCC
Q 018750 113 MAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV---PERVL---SLALLNVTG 162 (351)
Q Consensus 113 ~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~---p~~v~---~lvl~~~~~ 162 (351)
+++++.++++.++. ++++|+||||||.+|+.+|.+. |+++. ++|++++.+
T Consensus 68 ~a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 68 LAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp HHHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred HHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 99999999998864 7999999999999999999876 78898 999999863
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=155.02 Aligned_cols=199 Identities=9% Similarity=0.091 Sum_probs=131.2
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
+.++|||+||++++...|..+...|.. +++|+++|+||++ +++
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~g~~--------------~~~ 63 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNH-----------------------KAAVYGFHFIEED--------------SRI 63 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTT-----------------------TSEEEEECCCCST--------------THH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCC-----------------------CceEEEEcCCCHH--------------HHH
Confidence 345799999999999999999999986 8999999999863 346
Q ss_pred HHHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhC---CcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHH
Q 018750 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (351)
Q Consensus 115 ~dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
+++.++++.+. .++++++||||||.+|+.+|.+. ++++.++|++++..... .+...... ..
T Consensus 64 ~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~----~~~~~~~~-----------~~ 128 (244)
T 2cb9_A 64 EQYVSRITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQ----SITADTEN-----------DD 128 (244)
T ss_dssp HHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCS----CCCCC----------------
T ss_pred HHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcc----cccccccH-----------HH
Confidence 67777777775 47899999999999999999876 57899999999764210 00000000 00
Q ss_pred HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeec
Q 018750 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (351)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 270 (351)
. ...+... +. ..+...+. ....++.. ......+++|+++++|+
T Consensus 129 ~-----~~~~~~~-~~-------------~~~~~~~~------------~~~~~~~~------~~~~~~i~~Pvl~i~g~ 171 (244)
T 2cb9_A 129 S-----AAYLPEA-VR-------------ETVMQKKR------------CYQEYWAQ------LINEGRIKSNIHFIEAG 171 (244)
T ss_dssp -------CCSCHH-HH-------------HHHTHHHH------------HHHHHHHH------CCCCSCBSSEEEEEECS
T ss_pred H-----HHHhHHH-HH-------------HHHHHHHH------------HHHHHHHh------hccCCCcCCCEEEEEcc
Confidence 0 0000000 00 00000000 00000000 01235688999999999
Q ss_pred --CCccCCHHHHHHHHHHhCCCceEEEcCCCc--cccccChHHHHHHHHHHHHhcCC
Q 018750 271 --HDVIAQICYARRLAEKLYPVARMIDLPGGH--LVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 271 --~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH--~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
+|.+ +++....+.+...++.+++.++||| ++..++++++++.|.+||.+...
T Consensus 172 ~~~D~~-~~~~~~~w~~~~~~~~~~~~i~ggH~~~~~~~~~~~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 172 IQTETS-GAMVLQKWQDAAEEGYAEYTGYGAHKDMLEGEFAEKNANIILNILDKINS 227 (244)
T ss_dssp BCSCCC-HHHHTTSSGGGBSSCEEEEECSSBGGGTTSHHHHHHHHHHHHHHHHTC--
T ss_pred Cccccc-cccchhHHHHhcCCCCEEEEecCChHHHcChHHHHHHHHHHHHHHhcCcc
Confidence 8874 4454555555443478999999999 67678899999999999986543
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-20 Score=162.13 Aligned_cols=230 Identities=11% Similarity=0.025 Sum_probs=131.6
Q ss_pred cCCeEEEEEEcCC-----CCCeEEEEec---CCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCC-CeEEEEec
Q 018750 22 DNGIKIFYRTYGR-----GPTKVILITG---LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA-GIEVCAFD 92 (351)
Q Consensus 22 ~~g~~l~y~~~g~-----~~p~vv~~HG---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D 92 (351)
..+..+.+..+.+ ..|+||++|| ++++...|..++..|++ + ||.|+++|
T Consensus 55 ~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~----------------------~~g~~v~~~d 112 (310)
T 2hm7_A 55 LPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAK----------------------DGRAVVFSVD 112 (310)
T ss_dssp ETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHH----------------------HHTSEEEEEC
T ss_pred cCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHH----------------------hcCCEEEEeC
Confidence 3344666554422 2468999999 77888899999999986 3 89999999
Q ss_pred CCCCCCCCCCCCCCccchHhHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccCCCCCC
Q 018750 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTGGGFQ 166 (351)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~ 166 (351)
+||+|.+..+. ...+..+.++.+.+..+.++ .++++|+||||||.+|+.++.++|+ +++++|++++......
T Consensus 113 ~rg~~~~~~~~--~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~ 190 (310)
T 2hm7_A 113 YRLAPEHKFPA--AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDP 190 (310)
T ss_dssp CCCTTTSCTTH--HHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCT
T ss_pred CCCCCCCCCCc--cHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCc
Confidence 99999875332 01112222222222222223 3689999999999999999998876 6999999998642110
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
....... .... .........+. .+...+...........
T Consensus 191 ---~~~~~~~---~~~~------------~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--------- 229 (310)
T 2hm7_A 191 ---AHPPASI---EENA------------EGYLLTGGMML--------------WFRDQYLNSLEELTHPW--------- 229 (310)
T ss_dssp ---TSCCHHH---HHTS------------SSSSSCHHHHH--------------HHHHHHCSSGGGGGCTT---------
T ss_pred ---ccCCcch---hhcC------------CCCCCCHHHHH--------------HHHHHhCCCCCccCCcc---------
Confidence 0000000 0000 00000111110 01111000000000000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-----cChHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDL 317 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-----~~p~~~~~~i~~f 317 (351)
........+..+ .|+|+++|++|.++ ...+.+.+.+ ...++++++++ ||.... +.++++.+.|.+|
T Consensus 230 --~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~f 304 (310)
T 2hm7_A 230 --FSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEK 304 (310)
T ss_dssp --TCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHH
T ss_pred --CCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHH
Confidence 000000112333 39999999999987 3444454444 34578999998 996543 5678999999999
Q ss_pred HHhc
Q 018750 318 IKAS 321 (351)
Q Consensus 318 l~~~ 321 (351)
|++.
T Consensus 305 l~~~ 308 (310)
T 2hm7_A 305 LRDA 308 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9763
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-20 Score=154.38 Aligned_cols=202 Identities=15% Similarity=0.089 Sum_probs=129.4
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe---EEEEecCCCCC------CC----CCCC
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI---EVCAFDNRGMG------RS----SVPV 103 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~---~vi~~D~~G~G------~S----~~~~ 103 (351)
++|||+||++++...|..+++.|.+ +++ .+++++..++| .+ ..+.
T Consensus 4 ~pvvllHG~~~~~~~~~~l~~~L~~----------------------~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~ 61 (254)
T 3ds8_A 4 IPIILIHGSGGNASSLDKMADQLMN----------------------EYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPI 61 (254)
T ss_dssp CCEEEECCTTCCTTTTHHHHHHHHH----------------------TTCCCCCEEEEEEETTTEEEEESCCCTTCSSCE
T ss_pred CCEEEECCCCCCcchHHHHHHHHHH----------------------hcCCCceEEEEEEcCCCeEEEEEEeccCCCCCE
Confidence 4599999999999999999999987 222 33333333332 22 1220
Q ss_pred -----CCCccchHhHHHHHH----HHHHHhCCcceEEEEEchhhHHHHHHHHhCCc-----ccceEEEeccCCCCCCCCC
Q 018750 104 -----KKTEYTTKIMAKDVI----ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 104 -----~~~~~~~~~~~~dl~----~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~ 169 (351)
....++++++++++. .+.+.++.++++++||||||.+++.++.++|+ +|+++|+++++..+...
T Consensus 62 ~~~~~~~~~~~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~-- 139 (254)
T 3ds8_A 62 IKFGFEQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP-- 139 (254)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH--
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc--
Confidence 012457888888884 44556678899999999999999999999998 89999999986432110
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
.. ..... ... .... ....++.+..
T Consensus 140 ------~~----~~~~~--------~~~------------~~p~-~~~~~~~~~~------------------------- 163 (254)
T 3ds8_A 140 ------ND----NGMDL--------SFK------------KLPN-STPQMDYFIK------------------------- 163 (254)
T ss_dssp ------HH----HCSCT--------TCS------------SCSS-CCHHHHHHHH-------------------------
T ss_pred ------cc----ccccc--------ccc------------cCCc-chHHHHHHHH-------------------------
Confidence 00 00000 000 0000 0000000000
Q ss_pred CHHHHHHhhccCccEEEEeec------CCccCCHHHHHHHHHHhCCC---ceEEEcCC---CccccccChHHHHHHHHHH
Q 018750 250 TQKDIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYPV---ARMIDLPG---GHLVSHERTEEVNQALIDL 317 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~g---gH~~~~~~p~~~~~~i~~f 317 (351)
....+.. ++|++.|+|. +|.+||...++.+...+... .+.+.+.+ +|..+.++| ++.+.|..|
T Consensus 164 ---~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~-~v~~~i~~f 238 (254)
T 3ds8_A 164 ---NQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETP-KSIEKTYWF 238 (254)
T ss_dssp ---TGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSH-HHHHHHHHH
T ss_pred ---HHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCH-HHHHHHHHH
Confidence 0011222 6899999999 99999999999887765332 23334443 599999988 599999999
Q ss_pred HHhcCC
Q 018750 318 IKASEK 323 (351)
Q Consensus 318 l~~~~~ 323 (351)
|++...
T Consensus 239 L~~~~~ 244 (254)
T 3ds8_A 239 LEKFKT 244 (254)
T ss_dssp HHTCCC
T ss_pred HHHhcC
Confidence 998754
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-19 Score=153.21 Aligned_cols=244 Identities=13% Similarity=0.043 Sum_probs=138.1
Q ss_pred ccccCCeEEEEEEcC-CCCCeEEEEecCC---CCccch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 19 ALNDNGIKIFYRTYG-RGPTKVILITGLA---GTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g-~~~p~vv~~HG~~---~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
+...+|.++.++... .+.|+||++||++ ++...| ..+...+.+ .||+|+++|+
T Consensus 9 ~~~~~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~----------------------~g~~Vi~vdY 66 (274)
T 2qru_A 9 QTLANGATVTIYPTTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTS----------------------NGYTVLALDY 66 (274)
T ss_dssp EECTTSCEEEEECCSSSSCEEEEEECCSTTTSCCGGGCCHHHHHHHHT----------------------TTEEEEEECC
T ss_pred ccccCCeeEEEEcCCCCCCcEEEEEeCccccCCChhhchHHHHHHHHH----------------------CCCEEEEeCC
Confidence 344467778776553 3457899999988 555555 556677776 6999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHh----C-CcceEEEEEchhhHHHHHHHH---hCCcccceEEEeccCCCCC
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----G-WKQAHVFGHSMGAMIACKLAA---MVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~----~-~~~v~lvG~S~Gg~~a~~~a~---~~p~~v~~lvl~~~~~~~~ 165 (351)
|+.... .+...++|+.++++.+ . .++++|+|+|+||.+|+.++. ..+.++++++++.+.....
T Consensus 67 rlaPe~---------~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~ 137 (274)
T 2qru_A 67 LLAPNT---------KIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLE 137 (274)
T ss_dssp CCTTTS---------CHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSG
T ss_pred CCCCCC---------CCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccccc
Confidence 975432 3444555555555444 3 679999999999999999987 3577899999887643200
Q ss_pred CCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchh---hhhHHHHHhhhhhccCCCCCCcchhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR---AILYQEYVKGISATGMQSNYGFDGQIH 242 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
....... ...................... ......... ......+. .+... . .. ....
T Consensus 138 -----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~-~~~~--- 198 (274)
T 2qru_A 138 -----FIKEPRK---LLKQAISAKEIAAIDQTKPVWD----DPFLSRYLLYHYSIQQALLP-HFYGL-P-EN-GDWS--- 198 (274)
T ss_dssp -----GGGSCCC---SCSSCCCSGGGTTSCCSSCCSC----CTTCTTHHHHHHHHHTTCHH-HHHTC-C-TT-SCCG---
T ss_pred -----ccCCchh---hccccccHHHHhhhcccCCCCC----Cccccchhhhhhhhhhcchh-hccCc-c-cc-cccc---
Confidence 0000000 0000000000000000000000 000000000 00000000 00000 0 00 0000
Q ss_pred hhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccCh----HHHHHHHHHH
Q 018750 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT----EEVNQALIDL 317 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p----~~~~~~i~~f 317 (351)
...... ..+..+ .|+|+++|+.|.+++...++++.+.+ ++++++++++ +|.++.+.+ +++.+.+.+|
T Consensus 199 ---~~~~~~---~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~-~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~f 270 (274)
T 2qru_A 199 ---AYALSD---ETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTI-PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSW 270 (274)
T ss_dssp ---GGCCCH---HHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHS-TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHH
T ss_pred ---cCCCCh---hhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhC-CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHH
Confidence 000111 245566 79999999999999988999999876 7899999998 998776543 3568888999
Q ss_pred HHh
Q 018750 318 IKA 320 (351)
Q Consensus 318 l~~ 320 (351)
|++
T Consensus 271 l~~ 273 (274)
T 2qru_A 271 LKE 273 (274)
T ss_dssp HHT
T ss_pred Hhh
Confidence 875
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=160.67 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=84.6
Q ss_pred CCeEEEEecCCCCccc-hH-HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 36 PTKVILITGLAGTHDA-WG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
+++|||+||++++... |. .+.+.|.+ +||+|+++|+||||.++. ..+.+++
T Consensus 31 ~~~VvllHG~~~~~~~~~~~~l~~~L~~----------------------~G~~v~~~d~~g~g~~~~-----~~~~~~l 83 (317)
T 1tca_A 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQ----------------------LGYTPCWISPPPFMLNDT-----QVNTEYM 83 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHT----------------------TTCEEEEECCTTTTCSCH-----HHHHHHH
T ss_pred CCeEEEECCCCCCcchhhHHHHHHHHHh----------------------CCCEEEEECCCCCCCCcH-----HHHHHHH
Confidence 4579999999999886 88 88999987 699999999999997642 2345667
Q ss_pred HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCC
Q 018750 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTG 162 (351)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 162 (351)
.+.+..+++..+.++++||||||||.++..++..+| ++|+++|+++++.
T Consensus 84 ~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 84 VNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCC
Confidence 777777777778889999999999999999988876 7899999999863
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.3e-20 Score=179.19 Aligned_cols=215 Identities=14% Similarity=0.181 Sum_probs=143.4
Q ss_pred cCCeEEEEEEcCC-------CCCeEEEEecCCCCc---cchH--HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 22 DNGIKIFYRTYGR-------GPTKVILITGLAGTH---DAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 22 ~~g~~l~y~~~g~-------~~p~vv~~HG~~~~~---~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.+| ++.+..+.+ ..|+||++||++++. ..|. .....|++ +||.|+
T Consensus 476 ~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~G~~vv 532 (723)
T 1xfd_A 476 DDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS----------------------HGAVVV 532 (723)
T ss_dssp TTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCCEEE
T ss_pred CCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhc----------------------CCEEEE
Confidence 355 777655432 236899999998763 3333 45566765 599999
Q ss_pred EecCCCCCCCCC------CCCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhC----CcccceEEE
Q 018750 90 AFDNRGMGRSSV------PVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMV----PERVLSLAL 157 (351)
Q Consensus 90 ~~D~~G~G~S~~------~~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl 157 (351)
++|+||+|.+.. ........++++.+.+..+.+.- +.++++|+||||||.+++.++.++ |++++++|+
T Consensus 533 ~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~ 612 (723)
T 1xfd_A 533 KCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSA 612 (723)
T ss_dssp CCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEE
T ss_pred EECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEE
Confidence 999999998521 11112234555555555544431 236899999999999999999999 999999999
Q ss_pred eccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCc
Q 018750 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (351)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (351)
+++..... . . ...+...+.+.... ....+
T Consensus 613 ~~~~~~~~-------~--~------------------------~~~~~~~~~~~~~~------------------~~~~~ 641 (723)
T 1xfd_A 613 LSPITDFK-------L--Y------------------------ASAFSERYLGLHGL------------------DNRAY 641 (723)
T ss_dssp ESCCCCTT-------S--S------------------------BHHHHHHHHCCCSS------------------CCSST
T ss_pred ccCCcchH-------H--h------------------------hhhccHhhcCCccC------------------ChhHH
Confidence 98763100 0 0 00011111110000 00000
Q ss_pred chhhhhhhcccCCHHHHHHhhccC-ccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccc-cccChHHHH
Q 018750 238 DGQIHACWMHKMTQKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLV-SHERTEEVN 311 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~-~~~~p~~~~ 311 (351)
........+.+++ +|+|+++|++|.++|++.++.+.+.+ ..+.+++++++ ||.+ ..+.++++.
T Consensus 642 -----------~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 710 (723)
T 1xfd_A 642 -----------EMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLY 710 (723)
T ss_dssp -----------TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHH
T ss_pred -----------HhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHH
Confidence 0112234567788 89999999999999999998888776 24679999998 9988 567899999
Q ss_pred HHHHHHHHhc
Q 018750 312 QALIDLIKAS 321 (351)
Q Consensus 312 ~~i~~fl~~~ 321 (351)
+.|.+||++.
T Consensus 711 ~~i~~fl~~~ 720 (723)
T 1xfd_A 711 RSIINFFVEC 720 (723)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHH
Confidence 9999999765
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=161.84 Aligned_cols=202 Identities=14% Similarity=0.100 Sum_probs=131.5
Q ss_pred CCCeEEEEecC---CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 35 GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 35 ~~p~vv~~HG~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
+.|+||++||. .++...|..+...|++ +||.|+++|+||+|.+..+. ...+..
T Consensus 81 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~r~~~~~~~~~--~~~d~~ 136 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLVR----------------------RGYRVAVMDYNLCPQVTLEQ--LMTQFT 136 (303)
T ss_dssp TCCEEEEECCSTTTSCCGGGSCTTHHHHHH----------------------TTCEEEEECCCCTTTSCHHH--HHHHHH
T ss_pred CCCEEEEECCCcCcCCChhHHHHHHHHHHh----------------------CCCEEEEecCCCCCCCChhH--HHHHHH
Confidence 45789999994 4566677778888887 69999999999998763221 011222
Q ss_pred hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC-------cccceEEEeccCCCCCCCCCccchhhhHHHHhhcc
Q 018750 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP-------ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (351)
+.++.+.+..+.++.++++|+||||||.+++.++...+ ++++++|++++... +. ... .
T Consensus 137 ~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~-------~~--~~~---~--- 201 (303)
T 4e15_A 137 HFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYD-------LR--ELS---N--- 201 (303)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCC-------CH--HHH---T---
T ss_pred HHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeec-------cH--hhh---c---
Confidence 22233333334567789999999999999999987643 37999999997621 10 000 0
Q ss_pred cCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh----hcc
Q 018750 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI----RSA 260 (351)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~i 260 (351)
... ......+...... . .. .. .....+ ..+
T Consensus 202 ~~~---------------~~~~~~~~~~~~~---~----~~---------------~s---------p~~~~~~~~~~~~ 235 (303)
T 4e15_A 202 LES---------------VNPKNILGLNERN---I----ES---------------VS---------PMLWEYTDVTVWN 235 (303)
T ss_dssp CTT---------------TSGGGTTCCCTTT---T----TT---------------TC---------GGGCCCCCGGGGT
T ss_pred ccc---------------cchhhhhcCCHHH---H----HH---------------cC---------chhhcccccccCC
Confidence 000 0000000000000 0 00 00 000011 234
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
++|+|+++|++|.+++.+.++.+.+.+ ..+++++++++ ||+.+++...+....+.+||.+.
T Consensus 236 ~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 236 STKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp TSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 799999999999999999999998877 23678999998 99999999888888888888654
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-21 Score=163.43 Aligned_cols=107 Identities=14% Similarity=0.146 Sum_probs=82.1
Q ss_pred CeEEEEecCCCCc---cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 37 TKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 37 p~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
++|||+||++++. ..|..+.+.|.+.. .|++|+++|+ |||.|.........++.+.
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~--------------------~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~ 64 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKI--------------------PGIHVLSLEI-GKTLREDVENSFFLNVNSQ 64 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHS--------------------TTCCEEECCC-SSSHHHHHHHHHHSCHHHH
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHC--------------------CCcEEEEEEe-CCCCccccccccccCHHHH
Confidence 3599999999887 78999999998611 1679999998 9998752211011356666
Q ss_pred HHHHHHHHHHhC-C-cceEEEEEchhhHHHHHHHHhCCcc-cceEEEeccCCCC
Q 018750 114 AKDVIALMDHLG-W-KQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGG 164 (351)
Q Consensus 114 ~~dl~~~l~~~~-~-~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~ 164 (351)
++++.+.++... . +++++|||||||.++..++.++|++ |+++|+++++..+
T Consensus 65 ~~~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~g 118 (279)
T 1ei9_A 65 VTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp HHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred HHHHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCccCC
Confidence 777766666521 1 6899999999999999999999984 9999999976544
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-19 Score=172.69 Aligned_cols=219 Identities=15% Similarity=0.140 Sum_probs=140.9
Q ss_pred ccCCeEEEEEEcCC-------CCCeEEEEecCCCCcc---chH-HHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 21 NDNGIKIFYRTYGR-------GPTKVILITGLAGTHD---AWG-PQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 21 ~~~g~~l~y~~~g~-------~~p~vv~~HG~~~~~~---~~~-~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
+..+.++++..+.+ +.|+||++||++++.. .|. .+...|. + +||.|
T Consensus 474 ~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~----------------------~G~~v 531 (719)
T 1z68_A 474 EVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASK----------------------EGMVI 531 (719)
T ss_dssp EETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHT----------------------TCCEE
T ss_pred ecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhc----------------------CCeEE
Confidence 34457787766532 2367999999988753 343 3444453 4 59999
Q ss_pred EEecCCCCCCCCCCCC------CCccchHhHHHHHHHHHHH--hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 89 CAFDNRGMGRSSVPVK------KTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~------~~~~~~~~~~~dl~~~l~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+++|+||+|.+..... ......+++.+.+..+.+. ++.++++++||||||.+++.++.++|++++++|++++
T Consensus 532 ~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 611 (719)
T 1z68_A 532 ALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAP 611 (719)
T ss_dssp EEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESC
T ss_pred EEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCC
Confidence 9999999999863210 0112333444444444332 1235899999999999999999999999999999987
Q ss_pred CCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
..... .. ...+...+++..... .....+..
T Consensus 612 ~~~~~----~~-----------------------------~~~~~~~~~g~~~~~-~~~~~~~~---------------- 641 (719)
T 1z68_A 612 VSSWE----YY-----------------------------ASVYTERFMGLPTKD-DNLEHYKN---------------- 641 (719)
T ss_dssp CCCTT----TS-----------------------------BHHHHHHHHCCSSTT-TTHHHHHH----------------
T ss_pred ccChH----Hh-----------------------------ccccchhhcCCcccc-cchhhhhh----------------
Confidence 63110 00 000111111111000 00000000
Q ss_pred hhhhhcccCCHHHHHHhhccCc-cEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccChHHHHHHHH
Q 018750 241 IHACWMHKMTQKDIQTIRSAGF-LVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
......+.++++ |+|+++|++|..+|++.++++.+.+. ...+++++++ ||....++++++.+.|.
T Consensus 642 ----------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 711 (719)
T 1z68_A 642 ----------STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMT 711 (719)
T ss_dssp ----------TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHH
T ss_pred ----------CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHH
Confidence 001123456777 89999999999999999998888762 3467999998 99987778999999999
Q ss_pred HHHHhc
Q 018750 316 DLIKAS 321 (351)
Q Consensus 316 ~fl~~~ 321 (351)
+||++.
T Consensus 712 ~fl~~~ 717 (719)
T 1z68_A 712 HFLKQC 717 (719)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999864
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-19 Score=172.07 Aligned_cols=221 Identities=15% Similarity=0.150 Sum_probs=144.4
Q ss_pred ccCCeEEEEEEcCC-------CCCeEEEEecCCCCc---cchH-HHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 21 NDNGIKIFYRTYGR-------GPTKVILITGLAGTH---DAWG-PQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 21 ~~~g~~l~y~~~g~-------~~p~vv~~HG~~~~~---~~~~-~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
..+|..+++....+ ..|+||++||.+++. ..|. .+...|+ + +||.|
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~----------------------~G~~V 537 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST----------------------ENIIV 537 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCCEE
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhc----------------------CCeEE
Confidence 67899998876643 236899999998773 2332 2334444 3 59999
Q ss_pred EEecCCCCCCCCCCC------CCCccchHhHHHHHHHHHHHhC---CcceEEEEEchhhHHHHHHHHhCCcccceEEEec
Q 018750 89 CAFDNRGMGRSSVPV------KKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (351)
Q Consensus 89 i~~D~~G~G~S~~~~------~~~~~~~~~~~~dl~~~l~~~~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (351)
+++|.||+|.+.... .......+++.+.+..+.+ .+ .+++.|+||||||.+++.++.++|++++++|+++
T Consensus 538 v~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 616 (740)
T 4a5s_A 538 ASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSK-MGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVA 616 (740)
T ss_dssp EEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEES
T ss_pred EEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHh-cCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcC
Confidence 999999999764321 1012234444444444442 22 2689999999999999999999999999999999
Q ss_pred cCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcch
Q 018750 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (351)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
|... +. . +...+...+++..... .....+..
T Consensus 617 p~~~-------~~--~------------------------~~~~~~~~~~~~p~~~-~~~~~~~~--------------- 647 (740)
T 4a5s_A 617 PVSR-------WE--Y------------------------YDSVYTERYMGLPTPE-DNLDHYRN--------------- 647 (740)
T ss_dssp CCCC-------GG--G------------------------SBHHHHHHHHCCSSTT-TTHHHHHH---------------
T ss_pred Cccc-------hH--H------------------------hhhHHHHHHcCCCCcc-ccHHHHHh---------------
Confidence 7631 00 0 0011111122211000 00000000
Q ss_pred hhhhhhcccCCHHHHHHhhccCc-cEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccc-cccChHHHHHH
Q 018750 240 QIHACWMHKMTQKDIQTIRSAGF-LVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLV-SHERTEEVNQA 313 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~-~~~~p~~~~~~ 313 (351)
......+.++++ |+|+++|++|..+|++.++++.+.+ ....+++++++ ||.+ ..+.++++.+.
T Consensus 648 -----------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~ 716 (740)
T 4a5s_A 648 -----------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTH 716 (740)
T ss_dssp -----------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHH
T ss_pred -----------CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHH
Confidence 001123456666 9999999999999999998888876 23568899998 9988 66788999999
Q ss_pred HHHHHHhcCCC
Q 018750 314 LIDLIKASEKK 324 (351)
Q Consensus 314 i~~fl~~~~~~ 324 (351)
+.+||.+....
T Consensus 717 i~~fl~~~l~~ 727 (740)
T 4a5s_A 717 MSHFIKQCFSL 727 (740)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999987654
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-20 Score=153.85 Aligned_cols=192 Identities=14% Similarity=0.147 Sum_probs=126.1
Q ss_pred CCCeEEEEecCCCCccchH----HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC----------------
Q 018750 35 GPTKVILITGLAGTHDAWG----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR---------------- 94 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~---------------- 94 (351)
..|+|||+||++++...|. .+.+.|.+ +||+|+++|+|
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~----------------------~g~~v~~~d~p~~~~~~~~~~~~~~~~ 61 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKK----------------------ANVQCDYIDAPVLLEKKDLPFEMDDEK 61 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHH----------------------TTCEEEEECCSEECCGGGCSSCCCHHH
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhh----------------------cceEEEEcCCCeeCCCcCccccccccc
Confidence 3578999999999998876 35566655 59999999999
Q ss_pred -----CCCCCCCCC----CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc------ccceEEEec
Q 018750 95 -----GMGRSSVPV----KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE------RVLSLALLN 159 (351)
Q Consensus 95 -----G~G~S~~~~----~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~------~v~~lvl~~ 159 (351)
|+|.+.... .....++.+.++.+.+.++..+ ++++|+||||||.+|+.+|.+++. .++.+++++
T Consensus 62 ~~~~~g~g~~~~w~~~~~~~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~ 140 (243)
T 1ycd_A 62 WQATLDADVNRAWFYHSEISHELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVIS 140 (243)
T ss_dssp HHHHHHTTCCEESSCCCSSGGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEES
T ss_pred ccccCCCCCCcccccCCCCcchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEec
Confidence 445442110 0012356777777777776655 579999999999999999987532 466777776
Q ss_pred cCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcch
Q 018750 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (351)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
+.... .... . . . ...... ..+
T Consensus 141 g~~~~-------~~~~---------~--------~--~------------~~~~~~----~~~----------------- 161 (243)
T 1ycd_A 141 GYSFT-------EPDP---------E--------H--P------------GELRIT----EKF----------------- 161 (243)
T ss_dssp CCCCE-------EECT---------T--------S--T------------TCEEEC----GGG-----------------
T ss_pred CCCCC-------Cccc---------c--------c--c------------cccccc----hhH-----------------
Confidence 54210 0000 0 0 0 000000 000
Q ss_pred hhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC-------ceEEEcC-CCccccccChHHHH
Q 018750 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-------ARMIDLP-GGHLVSHERTEEVN 311 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-------~~~~~~~-ggH~~~~~~p~~~~ 311 (351)
.. ....+.++++|+|+++|++|.++|++.++.+.+.+ ++ ...++++ +||....+ +++.
T Consensus 162 --~~---------~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~ 227 (243)
T 1ycd_A 162 --RD---------SFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIY-LKAQNGNKEKVLAYEHPGGHMVPNK--KDII 227 (243)
T ss_dssp --TT---------TTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHH-HHHTTTCTTTEEEEEESSSSSCCCC--HHHH
T ss_pred --HH---------hccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHh-hhhccccccccEEEecCCCCcCCch--HHHH
Confidence 00 00123567899999999999999999999998876 33 2444555 59987654 4699
Q ss_pred HHHHHHHHhcC
Q 018750 312 QALIDLIKASE 322 (351)
Q Consensus 312 ~~i~~fl~~~~ 322 (351)
+.|.+||++..
T Consensus 228 ~~i~~fl~~~~ 238 (243)
T 1ycd_A 228 RPIVEQITSSL 238 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998754
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-19 Score=149.90 Aligned_cols=118 Identities=21% Similarity=0.227 Sum_probs=86.9
Q ss_pred cCCeEEEEEEcC------CCCCeEEEEecCCCCccchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 22 DNGIKIFYRTYG------RGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 22 ~~g~~l~y~~~g------~~~p~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
..|..+.+..+- ...|+||++||++++...|.. +...+.+ .||.|+++|
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~d 81 (278)
T 3e4d_A 24 TLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASE----------------------LGLVVVCPD 81 (278)
T ss_dssp TTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH----------------------HTCEEEECC
T ss_pred ccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhh----------------------CCeEEEecC
Confidence 346666655543 234689999999999888766 3333443 489999999
Q ss_pred CCCCCCCCCCCC--------------------CCccc-hHhHHHHHHHHHHHh-CC--cceEEEEEchhhHHHHHHHHhC
Q 018750 93 NRGMGRSSVPVK--------------------KTEYT-TKIMAKDVIALMDHL-GW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 93 ~~G~G~S~~~~~--------------------~~~~~-~~~~~~dl~~~l~~~-~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
.||+|.|..... ...+. .+..++++..+++.. +. ++++|+||||||.+|+.++.++
T Consensus 82 ~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 161 (278)
T 3e4d_A 82 TSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKN 161 (278)
T ss_dssp SSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC
T ss_pred CcccCcccccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhC
Confidence 999998854330 00112 223455677777765 65 7899999999999999999999
Q ss_pred CcccceEEEeccC
Q 018750 149 PERVLSLALLNVT 161 (351)
Q Consensus 149 p~~v~~lvl~~~~ 161 (351)
|+++++++++++.
T Consensus 162 p~~~~~~v~~~~~ 174 (278)
T 3e4d_A 162 PERFKSCSAFAPI 174 (278)
T ss_dssp TTTCSCEEEESCC
T ss_pred CcccceEEEeCCc
Confidence 9999999999986
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=150.93 Aligned_cols=180 Identities=18% Similarity=0.192 Sum_probs=122.3
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC------CCCCCCCCC-----
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR------GMGRSSVPV----- 103 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~------G~G~S~~~~----- 103 (351)
..|+|||+||+|++...|..+.+.|...+ .++.+++++-| |.|.+-...
T Consensus 65 ~~plVI~LHG~G~~~~~~~~~~~~l~~~~--------------------~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~ 124 (285)
T 4fhz_A 65 ATSLVVFLHGYGADGADLLGLAEPLAPHL--------------------PGTAFVAPDAPEPCRANGFGFQWFPIPWLDG 124 (285)
T ss_dssp CSEEEEEECCTTBCHHHHHTTHHHHGGGS--------------------TTEEEEEECCSEECTTSSSCEESSCCHHHHC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhC--------------------CCeEEEecCCCcccccCCCcccccccccccC
Confidence 44689999999999988888888887521 27889988754 334321100
Q ss_pred CCCcc---chHhHHHHHHHHHH----HhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 104 KKTEY---TTKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 104 ~~~~~---~~~~~~~dl~~~l~----~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
..... .+.+.++++.++++ ..++ ++++++|+|+||.+++.++.++|+++.++|.+++....
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------- 194 (285)
T 4fhz_A 125 SSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC----------
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC----------
Confidence 00011 12233444554444 3344 58999999999999999999999999999998864100
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
... .
T Consensus 195 ---------------------------~~~-------------------------------------------------~ 198 (285)
T 4fhz_A 195 ---------------------------PER-------------------------------------------------L 198 (285)
T ss_dssp ---------------------------HHH-------------------------------------------------H
T ss_pred ---------------------------chh-------------------------------------------------h
Confidence 000 0
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCCC
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~~ 324 (351)
......+.|++++||++|.++|.+..+++.+.+ ..+.+++++++ ||.+. +++ .+.+.+||++....
T Consensus 199 ~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~Lpd 268 (285)
T 4fhz_A 199 AEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKERLPD 268 (285)
T ss_dssp HHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHHCC-
T ss_pred hhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHHCcC
Confidence 011223579999999999999999888887766 34578889999 99763 333 46688899886543
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-19 Score=147.85 Aligned_cols=206 Identities=12% Similarity=0.124 Sum_probs=128.3
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
+.++|+|+||++++...|..+...|. . ++|+++|+||+|. .+
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~-----------------------~-~~v~~~d~~g~~~--------------~~ 57 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLP-----------------------S-YKLCAFDFIEEED--------------RL 57 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCT-----------------------T-EEEEEECCCCSTT--------------HH
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcC-----------------------C-CeEEEecCCCHHH--------------HH
Confidence 34679999999999999999998884 4 9999999998763 34
Q ss_pred HHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHH
Q 018750 115 KDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (351)
Q Consensus 115 ~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
+++.++++.+.. ++++++||||||.+|+.+|.+.+ ++++++|++++...... ..+... .....
T Consensus 58 ~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~--~~~~~~-------~~~~~---- 124 (230)
T 1jmk_C 58 DRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV--SDLDGR-------TVESD---- 124 (230)
T ss_dssp HHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC--C---------------CC----
T ss_pred HHHHHHHHHhCCCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcc--cccccc-------cHHHH----
Confidence 566677777764 58999999999999999998764 57999999987532110 000000 00000
Q ss_pred HhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEee
Q 018750 191 RAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (351)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 269 (351)
....+........ ........+.... .....+.. .......+++|+++++|
T Consensus 125 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~------~~~~~~~~~~P~l~i~g 176 (230)
T 1jmk_C 125 ----------VEALMNVNRDNEALNSEAVKHGLKQKT------------HAFYSYYV------NLISTGQVKADIDLLTS 176 (230)
T ss_dssp ----------HHHHHHHTTTCSGGGSHHHHHHHHHHH------------HHHHHHHH------HCCCCSCBSSEEEEEEC
T ss_pred ----------HHHHHhcChhhhhhhhHHHHHHHHHHH------------HHHHHHhh------hccccccccccEEEEEe
Confidence 0000000000000 0000000000000 00000000 00123578899999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCceEEEcCCCc--cccccChHHHHHHHHHHHHh
Q 018750 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGH--LVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 270 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH--~~~~~~p~~~~~~i~~fl~~ 320 (351)
++|..++ .....+.+...++.+++.++||| ++..++++++++.|.+||.+
T Consensus 177 ~~D~~~~-~~~~~w~~~~~~~~~~~~i~g~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 177 GADFDIP-EWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp SSCCCCC-TTEECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCc-cccchHHHhcCCCeEEEEecCChHHHcCcHhHHHHHHHHHHHHhh
Confidence 9999887 33334444433568899999999 78788899999999999965
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-18 Score=149.56 Aligned_cols=228 Identities=8% Similarity=0.042 Sum_probs=135.4
Q ss_pred cccCCeEEEEEEcC--CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 20 LNDNGIKIFYRTYG--RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 20 ~~~~g~~l~y~~~g--~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
++.++..+.+.... .+.|+||++||.+ ++...|..++..|+.. .||.|+++|+|
T Consensus 62 ~~~~~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~vv~~dyr 120 (322)
T 3fak_A 62 VTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRA---------------------SQAAALLLDYR 120 (322)
T ss_dssp EEETTEEEEEEECTTCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHH---------------------HTSEEEEECCC
T ss_pred EeeCCeEEEEEeCCCCCCccEEEEEcCCccccCChHHHHHHHHHHHHh---------------------cCCEEEEEeCC
Confidence 34456666655432 2457899999976 5666777788777641 39999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHH-hCCcceEEEEEchhhHHHHHHHHhCCcc----cceEEEeccCCCCCCCCC
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDH-LGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~ 169 (351)
+.+.... ...++|..+.+..+.+. ++.++++|+|||+||.+|+.++.+.+++ ++++|+++|........
T Consensus 121 ~~p~~~~-----~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~- 194 (322)
T 3fak_A 121 LAPEHPF-----PAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN- 194 (322)
T ss_dssp CTTTSCT-----THHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC-
T ss_pred CCCCCCC-----CcHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCC-
Confidence 8765532 22456666666666665 4456899999999999999999887765 99999999864211100
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
..... .... ...........+...+.... ... .....
T Consensus 195 ----~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~------------------~~~-~~~~s---------- 231 (322)
T 3fak_A 195 ----DSFKT---RAEA-------DPMVAPGGINKMAARYLNGA------------------DAK-HPYAS---------- 231 (322)
T ss_dssp ----THHHH---TTTT-------CCSCCSSHHHHHHHHHHTTS------------------CTT-CTTTC----------
T ss_pred ----cCHHH---hCcc-------CcccCHHHHHHHHHHhcCCC------------------CCC-CcccC----------
Confidence 00000 0000 00000000011111111100 000 00000
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-----cChHHHHHHHHHHHHh
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIKA 320 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-----~~p~~~~~~i~~fl~~ 320 (351)
.....+..+ .|+|+++|++|.+++ ....+++.+ ...++++++++ +|.... +..+++.+.+.+||++
T Consensus 232 --p~~~~~~~~-pP~li~~g~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3fak_A 232 --PNFANLKGL-PPLLIHVGRDEVLLD--DSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMRE 306 (322)
T ss_dssp --GGGSCCTTC-CCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred --CCcccccCC-ChHhEEEcCcCccHH--HHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHH
Confidence 000112222 399999999998854 444555444 34679999999 997653 4468899999999987
Q ss_pred cC
Q 018750 321 SE 322 (351)
Q Consensus 321 ~~ 322 (351)
.-
T Consensus 307 ~l 308 (322)
T 3fak_A 307 QW 308 (322)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-18 Score=145.60 Aligned_cols=118 Identities=19% Similarity=0.251 Sum_probs=84.7
Q ss_pred cCCeEEEEEEcC-------CCCCeEEEEecCCCCccchHHH---HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 22 DNGIKIFYRTYG-------RGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 22 ~~g~~l~y~~~g-------~~~p~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
..|..+.+..+- ...|+||++||++++...|... ...+.+ .|+.|+++
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~p 83 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAE----------------------LGIAIVAP 83 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHH----------------------HTCEEEEE
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhh----------------------CCeEEEEe
Confidence 356666665542 2347899999999988877653 344444 58999999
Q ss_pred cCCCCCCCCCCCCC---------------C----ccc-hHhHHHHHHHHHHH-hCC-cceEEEEEchhhHHHHHHHHhCC
Q 018750 92 DNRGMGRSSVPVKK---------------T----EYT-TKIMAKDVIALMDH-LGW-KQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 92 D~~G~G~S~~~~~~---------------~----~~~-~~~~~~dl~~~l~~-~~~-~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
|.+++|.+...... . .+. ...+++++..+++. ++. ++++|+||||||.+|+.++.++|
T Consensus 84 d~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 163 (280)
T 3i6y_A 84 DTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNP 163 (280)
T ss_dssp CSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCT
T ss_pred CCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCC
Confidence 99988765432210 0 001 23345677777754 344 78999999999999999999999
Q ss_pred cccceEEEeccC
Q 018750 150 ERVLSLALLNVT 161 (351)
Q Consensus 150 ~~v~~lvl~~~~ 161 (351)
++++++|++++.
T Consensus 164 ~~~~~~v~~s~~ 175 (280)
T 3i6y_A 164 ERYQSVSAFSPI 175 (280)
T ss_dssp TTCSCEEEESCC
T ss_pred ccccEEEEeCCc
Confidence 999999999986
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=167.09 Aligned_cols=226 Identities=10% Similarity=0.034 Sum_probs=137.4
Q ss_pred cccCCeEEEEEEcC-----CCCCeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEec
Q 018750 20 LNDNGIKIFYRTYG-----RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (351)
Q Consensus 20 ~~~~g~~l~y~~~g-----~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (351)
...+|.++.+.... ...|+||++||.++... .|......|.+ +||.|+++|
T Consensus 467 ~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d 524 (741)
T 1yr2_A 467 PSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWID----------------------SGGAFALAN 524 (741)
T ss_dssp ECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHT----------------------TTCEEEEEC
T ss_pred EcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHH----------------------CCcEEEEEe
Confidence 34578888776542 23578999999877654 46666667776 699999999
Q ss_pred CCCCCCCCCC---CC---CCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC
Q 018750 93 NRGMGRSSVP---VK---KTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (351)
Q Consensus 93 ~~G~G~S~~~---~~---~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
+||+|.+... .. ....+++|+++.+..+++.- ..++++++|||+||.+++.++.++|++++++|+.++....
T Consensus 525 ~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~ 604 (741)
T 1yr2_A 525 LRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDM 604 (741)
T ss_dssp CTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT
T ss_pred cCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccc
Confidence 9999987321 00 01123455555555555431 3468999999999999999999999999999999876311
Q ss_pred CCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 165 FQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
.. . .. . .... .+...+ +... .....+.+ ...
T Consensus 605 ~~---------~------~~-~--------~~~~----~~~~~~-g~~~-~~~~~~~~-~~~------------------ 635 (741)
T 1yr2_A 605 LR---------F------DQ-F--------TAGR----YWVDDY-GYPE-KEADWRVL-RRY------------------ 635 (741)
T ss_dssp TS---------G------GG-S--------TTGG----GGHHHH-CCTT-SHHHHHHH-HTT------------------
T ss_pred cc---------c------cC-C--------CCCc----hhHHHc-CCCC-CHHHHHHH-HHc------------------
Confidence 00 0 00 0 0000 000111 1110 00000000 000
Q ss_pred hcccCCHHHHHHhhc-cCc-cEEEEeecCCccCCHHHHHHHHHHhCC------CceEEEcCC-Ccccccc--ChHHHHHH
Q 018750 245 WMHKMTQKDIQTIRS-AGF-LVSVIHGRHDVIAQICYARRLAEKLYP------VARMIDLPG-GHLVSHE--RTEEVNQA 313 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~-i~~-Pvlii~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~g-gH~~~~~--~p~~~~~~ 313 (351)
.....+.. +++ |+|+++|++|..+++..+.++.+.+.. .++++++++ ||..... +..++.+.
T Consensus 636 -------sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~ 708 (741)
T 1yr2_A 636 -------SPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETAD 708 (741)
T ss_dssp -------CGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHH
T ss_pred -------CchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHH
Confidence 00112343 664 999999999999999999988887622 378888998 9987653 34588899
Q ss_pred HHHHHHhcCC
Q 018750 314 LIDLIKASEK 323 (351)
Q Consensus 314 i~~fl~~~~~ 323 (351)
+.+||.+...
T Consensus 709 ~~~fl~~~l~ 718 (741)
T 1yr2_A 709 VQAFLAHFTG 718 (741)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999987654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-18 Score=164.86 Aligned_cols=226 Identities=13% Similarity=0.086 Sum_probs=141.6
Q ss_pred cccCCeEEEEEEcC-------CCCCeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 20 LNDNGIKIFYRTYG-------RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 20 ~~~~g~~l~y~~~g-------~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
...+|.++.+.... ...|+||++||.++... .|......|.+ +||.|++
T Consensus 423 ~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~ 480 (695)
T 2bkl_A 423 ASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLD----------------------AGGVYAV 480 (695)
T ss_dssp ECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHH----------------------TTCEEEE
T ss_pred ECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHh----------------------CCCEEEE
Confidence 34478888776542 24578999999766554 56655555655 5999999
Q ss_pred ecCCCCCCCCCCC--CCCccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 91 FDNRGMGRSSVPV--KKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 91 ~D~~G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+|+||+|.+...- ...........+|+.++++.+ ..+++.++|||+||.+++.++.++|++++++|+.++..
T Consensus 481 ~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~ 560 (695)
T 2bkl_A 481 ANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLL 560 (695)
T ss_dssp ECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred EecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCcc
Confidence 9999988764210 001112233345555555444 34689999999999999999999999999999998763
Q ss_pred CCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhh
Q 018750 163 GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (351)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
... .. .. . ... ..+...+ +... .....+.+ ...
T Consensus 561 d~~---------~~------~~-~--------~~~----~~~~~~~-g~~~-~~~~~~~~-~~~---------------- 593 (695)
T 2bkl_A 561 DMV---------RY------HL-F--------GSG----RTWIPEY-GTAE-KPEDFKTL-HAY---------------- 593 (695)
T ss_dssp CTT---------TG------GG-S--------TTG----GGGHHHH-CCTT-SHHHHHHH-HHH----------------
T ss_pred chh---------hc------cc-c--------CCC----cchHHHh-CCCC-CHHHHHHH-Hhc----------------
Confidence 110 00 00 0 000 0001111 1110 00000000 000
Q ss_pred hhhcccCCHHHHHHhhccC--ccEEEEeecCCccCCHHHHHHHHHHhCC------CceEEEcCC-Ccccc--ccChHHHH
Q 018750 243 ACWMHKMTQKDIQTIRSAG--FLVSVIHGRHDVIAQICYARRLAEKLYP------VARMIDLPG-GHLVS--HERTEEVN 311 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~--~Pvlii~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~g-gH~~~--~~~p~~~~ 311 (351)
.....+..++ +|+|+++|++|..+++..++.+.+.+.. ..+++++++ ||... .+++.+..
T Consensus 594 ---------sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 664 (695)
T 2bkl_A 594 ---------SPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESS 664 (695)
T ss_dssp ---------CGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHH
T ss_pred ---------ChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHH
Confidence 0011233333 5999999999999999999999888732 378888998 99873 35667788
Q ss_pred HHHHHHHHhcCC
Q 018750 312 QALIDLIKASEK 323 (351)
Q Consensus 312 ~~i~~fl~~~~~ 323 (351)
+.+.+||.+...
T Consensus 665 ~~~~~fl~~~l~ 676 (695)
T 2bkl_A 665 VDLYSFLFQVLD 676 (695)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 889999987654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=150.25 Aligned_cols=224 Identities=17% Similarity=0.094 Sum_probs=133.0
Q ss_pred cCCeEEEEEEcC---CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 22 DNGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 22 ~~g~~l~y~~~g---~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
.+|..+.++.+. ...|+||++||.+ ++...|..++..|+.. .||.|+++|+|+
T Consensus 68 ~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~---------------------~g~~vv~~dyr~ 126 (317)
T 3qh4_A 68 EAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARR---------------------ARCAVVSVDYRL 126 (317)
T ss_dssp TTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEEECCCC
T ss_pred CCCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHH---------------------cCCEEEEecCCC
Confidence 356456554443 2447899999877 6667788888888741 389999999998
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccCCCCCC
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTGGGFQ 166 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~ 166 (351)
.+....+ ..++|..+.+..+.+ .++. ++++|+|||+||.+|+.++.+.++ .+.++++++|.....
T Consensus 127 ~p~~~~p-----~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~- 200 (317)
T 3qh4_A 127 APEHPYP-----AALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR- 200 (317)
T ss_dssp TTTSCTT-----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-
T ss_pred CCCCCCc-----hHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-
Confidence 7765332 234444444433333 3554 489999999999999999988765 499999999863210
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
... ...... ....+..... ..+...+......... ..
T Consensus 201 -----~~~---~~~~~~------------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~------- 237 (317)
T 3qh4_A 201 -----PTA---SRSEFR------------ATPAFDGEAA--------------SLMWRHYLAGQTPSPE--SV------- 237 (317)
T ss_dssp -----CCH---HHHHTT------------TCSSSCHHHH--------------HHHHHHHHTTCCCCTT--TC-------
T ss_pred -----CCc---CHHHhc------------CCCCcCHHHH--------------HHHHHHhcCCCCCCcc--cC-------
Confidence 000 000000 0000111111 0111111100000000 00
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCC--HHHHHHHHHHhCCCceEEEcCC-Cccc-----cccChHHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ--ICYARRLAEKLYPVARMIDLPG-GHLV-----SHERTEEVNQALIDLI 318 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~g-gH~~-----~~~~p~~~~~~i~~fl 318 (351)
......+.. -.|+++++|++|.+++ ...++.+.+. ..+++++++++ +|.. ..+.++++.+.+.+||
T Consensus 238 ----p~~~~~l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~-g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l 311 (317)
T 3qh4_A 238 ----PGRRGQLAG-LPATLITCGEIDPFRDEVLDYAQRLLGA-GVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHAL 311 (317)
T ss_dssp ----GGGCSCCTT-CCCEEEEEEEESTTHHHHHHHHHHHHHT-TCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHH
T ss_pred ----CCcccccCC-CCceeEEecCcCCCchhHHHHHHHHHHc-CCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHH
Confidence 000011111 1399999999999987 4555555553 46789999999 9973 3456789999999999
Q ss_pred Hhc
Q 018750 319 KAS 321 (351)
Q Consensus 319 ~~~ 321 (351)
++.
T Consensus 312 ~~~ 314 (317)
T 3qh4_A 312 ADA 314 (317)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=146.48 Aligned_cols=223 Identities=17% Similarity=0.143 Sum_probs=130.9
Q ss_pred EEEEEEc---CCCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC
Q 018750 26 KIFYRTY---GRGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (351)
Q Consensus 26 ~l~y~~~---g~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 99 (351)
.+..+.+ +.+.|+||++||.+ ++...|..++..|+.. .||.|+++|+|+.+..
T Consensus 74 ~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~g~~V~~~dyr~~p~~ 132 (326)
T 3ga7_A 74 DVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARY---------------------TGCTVIGIDYSLSPQA 132 (326)
T ss_dssp CEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HCSEEEEECCCCTTTS
T ss_pred CeEEEEEeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHH---------------------cCCEEEEeeCCCCCCC
Confidence 5554433 23458899999988 8888899888888741 3999999999987655
Q ss_pred CCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhCCcc------cceEEEeccCCCCCCCC
Q 018750 100 SVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMVPER------VLSLALLNVTGGGFQCC 168 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~------v~~lvl~~~~~~~~~~~ 168 (351)
..+. .++|..+.+..+.+. ++. ++++|+|+|+||.+|+.++.+.+++ ++++|++++.....
T Consensus 133 ~~~~-----~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~--- 204 (326)
T 3ga7_A 133 RYPQ-----AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQ--- 204 (326)
T ss_dssp CTTH-----HHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCS---
T ss_pred CCCc-----HHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccC---
Confidence 3221 334444433333332 233 5899999999999999999988764 88999988753110
Q ss_pred CccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
..... ..... .........+.. +...+..........+
T Consensus 205 ---~~~~~----~~~~~----------~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~----------- 242 (326)
T 3ga7_A 205 ---DSVSR----RLFGG----------AWDGLTREDLDM--------------YEKAYLRNDEDRESPW----------- 242 (326)
T ss_dssp ---CCHHH----HHCCC----------TTTTCCHHHHHH--------------HHHHHCSSGGGGGCTT-----------
T ss_pred ---CChhH----hhhcC----------CCCCCCHHHHHH--------------HHHHhCCCCCccCCcc-----------
Confidence 00000 00000 000001111111 1110000000000000
Q ss_pred CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-----cChHHHHHHHHHHHH
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIK 319 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-----~~p~~~~~~i~~fl~ 319 (351)
.......+.+...|+++++|++|.+++ ....+.+.+ ...+++++++| +|.... +..+++.+.+.+||+
T Consensus 243 -~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 319 (326)
T 3ga7_A 243 -YCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFM 319 (326)
T ss_dssp -TSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred -cCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHH
Confidence 000001233445699999999999985 444444444 34679999999 997743 346889999999998
Q ss_pred hcC
Q 018750 320 ASE 322 (351)
Q Consensus 320 ~~~ 322 (351)
+..
T Consensus 320 ~~l 322 (326)
T 3ga7_A 320 ARM 322 (326)
T ss_dssp HHH
T ss_pred HHh
Confidence 753
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.77 E-value=8e-18 Score=146.12 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=83.1
Q ss_pred ccCCeEEEEEEc---C--CCCCeEEEEecCCCCccch-HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 21 NDNGIKIFYRTY---G--RGPTKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 21 ~~~g~~l~y~~~---g--~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
..+|.++.+..+ + +..|+||++||++++...| ..+...+.+ +||.|+++|+|
T Consensus 34 ~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~ 91 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADR----------------------HKLLIVAPTFS 91 (304)
T ss_dssp -CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHH----------------------HTCEEEEEECC
T ss_pred CCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHH----------------------CCcEEEEeCCc
Confidence 345666655432 2 2457899999999998877 666777776 69999999999
Q ss_pred ------------CC--CCCCCCCCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCc-ccceEEE
Q 018750 95 ------------GM--GRSSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLAL 157 (351)
Q Consensus 95 ------------G~--G~S~~~~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl 157 (351)
|+ |.|..+.......++++.+.+..+.+.. ..++++|+||||||.+++.++..+|+ +++++|+
T Consensus 92 ~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl 171 (304)
T 3d0k_A 92 DEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTA 171 (304)
T ss_dssp TTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEE
T ss_pred cccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEE
Confidence 66 6665432212233444333333333332 34689999999999999999999995 7999998
Q ss_pred eccC
Q 018750 158 LNVT 161 (351)
Q Consensus 158 ~~~~ 161 (351)
.++.
T Consensus 172 ~~~~ 175 (304)
T 3d0k_A 172 ANPG 175 (304)
T ss_dssp ESCS
T ss_pred ecCc
Confidence 8754
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-17 Score=146.64 Aligned_cols=103 Identities=17% Similarity=0.091 Sum_probs=75.8
Q ss_pred CCeEEEEecCCCCccc-----------hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCC
Q 018750 36 PTKVILITGLAGTHDA-----------WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (351)
.|+||++||++++... |..++..|.+ +||.|+++|+||||.|.....
T Consensus 79 ~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~G~~V~~~D~~G~G~s~~~~~ 136 (397)
T 3h2g_A 79 YPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLAS----------------------QGYVVVGSDYLGLGKSNYAYH 136 (397)
T ss_dssp EEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGG----------------------GTCEEEEECCTTSTTCCCSSC
T ss_pred CcEEEEeCCCcCCCCcccccccccccchHHHHHHHHH----------------------CCCEEEEecCCCCCCCCCCcc
Confidence 3678999999987665 5566676766 799999999999999974432
Q ss_pred CCc------cchHhHHHHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHh-CCc-----ccceEEEecc
Q 018750 105 KTE------YTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAM-VPE-----RVLSLALLNV 160 (351)
Q Consensus 105 ~~~------~~~~~~~~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~-~p~-----~v~~lvl~~~ 160 (351)
... .++.+.++++..+++.++. ++++++||||||.+++.++.. .++ .+.+++..++
T Consensus 137 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 207 (397)
T 3h2g_A 137 PYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISG 207 (397)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESC
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccc
Confidence 111 3466677777888888876 689999999999999988733 222 3555555544
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=142.28 Aligned_cols=117 Identities=19% Similarity=0.227 Sum_probs=81.6
Q ss_pred CCeEEEEEEcC------CCCCeEEEEecCCCCccchHHH---HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 23 NGIKIFYRTYG------RGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 23 ~g~~l~y~~~g------~~~p~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.|..+.+..+- ...|+||++||++++...|... ...+.+ +||.|+++|.
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~d~ 83 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASE----------------------HGLVVIAPDT 83 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH----------------------HTCEEEEECS
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcchHHHHhhc----------------------CCeEEEEecc
Confidence 46666655442 2346899999999988877655 455655 6999999999
Q ss_pred --CCCCCCCCC-------------CCC-Cc-----cchHhHHHHHHHHHH-HhCC--cceEEEEEchhhHHHHHHHHhCC
Q 018750 94 --RGMGRSSVP-------------VKK-TE-----YTTKIMAKDVIALMD-HLGW--KQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 94 --~G~G~S~~~-------------~~~-~~-----~~~~~~~~dl~~~l~-~~~~--~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
||+|.+... ... .. ......++++..+++ .++. ++++|+||||||.+|+.++.++|
T Consensus 84 ~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p 163 (282)
T 3fcx_A 84 SPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNP 163 (282)
T ss_dssp CSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTST
T ss_pred ccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCc
Confidence 766654321 000 00 112334556666666 4443 67999999999999999999999
Q ss_pred cccceEEEeccC
Q 018750 150 ERVLSLALLNVT 161 (351)
Q Consensus 150 ~~v~~lvl~~~~ 161 (351)
+++++++++++.
T Consensus 164 ~~~~~~v~~s~~ 175 (282)
T 3fcx_A 164 GKYKSVSAFAPI 175 (282)
T ss_dssp TTSSCEEEESCC
T ss_pred ccceEEEEeCCc
Confidence 999999999976
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.3e-17 Score=143.57 Aligned_cols=217 Identities=13% Similarity=0.049 Sum_probs=122.4
Q ss_pred CCeEEEEecCCC---Ccc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCC-CeEEEEecCCCCCCCCCCCCCCccc
Q 018750 36 PTKVILITGLAG---THD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA-GIEVCAFDNRGMGRSSVPVKKTEYT 109 (351)
Q Consensus 36 ~p~vv~~HG~~~---~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (351)
.|+||++||.+. +.. .|..++..|+. + ||.|+++|+|+.+....+ ..
T Consensus 112 ~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~----------------------~~g~~Vv~~dyR~~p~~~~~-----~~ 164 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVK----------------------LSKGVVVSVNYRRAPEHRYP-----CA 164 (365)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHH----------------------HHTSEEEEECCCCTTTSCTT-----HH
T ss_pred ceEEEEEcCCccccCCCchhhHHHHHHHHHH----------------------HCCCEEEEeeCCCCCCCCCc-----HH
Confidence 478999999763 222 26778888876 4 999999999976543221 12
Q ss_pred hHhHHHHHHHHHHH------hCCc-ceEEEEEchhhHHHHHHHHhCCc---ccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 110 TKIMAKDVIALMDH------LGWK-QAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 110 ~~~~~~dl~~~l~~------~~~~-~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++|..+.+..+.+. .+.+ +++|+|+|+||.+|+.++.+.++ +++++|+++|........+ . .
T Consensus 165 ~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~-----~---~ 236 (365)
T 3ebl_A 165 YDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTE-----S---E 236 (365)
T ss_dssp HHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCH-----H---H
T ss_pred HHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCCh-----h---h
Confidence 34444433333322 2335 89999999999999999998776 7999999998642211000 0 0
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
.... ......... ...+...+..............+ . .....+..
T Consensus 237 ~~~~------------~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~p~--------~-~~~~~l~~ 281 (365)
T 3ebl_A 237 RRLD------------GKYFVTLQD--------------RDWYWKAYLPEDADRDHPACNPF--------G-PNGRRLGG 281 (365)
T ss_dssp HHHT------------TTSSCCHHH--------------HHHHHHHHSCTTCCTTSTTTCTT--------S-TTCCCCTT
T ss_pred hhcC------------CCcccCHHH--------------HHHHHHHhCCCCCCCCCcccCCC--------C-Ccchhhcc
Confidence 0000 000000000 00111111000000000000000 0 00011222
Q ss_pred cC-ccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Ccccc----ccChHHHHHHHHHHHHhcCCC
Q 018750 260 AG-FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS----HERTEEVNQALIDLIKASEKK 324 (351)
Q Consensus 260 i~-~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~----~~~p~~~~~~i~~fl~~~~~~ 324 (351)
+. .|+|+++|++|.+++. ...+.+.+ ...+++++++| +|..+ .++.+++.+.|.+||++....
T Consensus 282 ~~~pP~Li~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~ 353 (365)
T 3ebl_A 282 LPFAKSLIIVSGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY 353 (365)
T ss_dssp SCCCCEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCEEEEEcCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhc
Confidence 22 4899999999987754 23333333 35789999998 99765 456789999999999987654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-17 Score=146.01 Aligned_cols=197 Identities=16% Similarity=0.101 Sum_probs=129.7
Q ss_pred CCeEEEEEEcCC-------CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhccccc--CCCCCCCeEEEEecC
Q 018750 23 NGIKIFYRTYGR-------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVE--SGDGGAGIEVCAFDN 93 (351)
Q Consensus 23 ~g~~l~y~~~g~-------~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~g~~vi~~D~ 93 (351)
+|..+.|..+.+ +.|+||++||++++...+ ....+...+ ...++ ......++.|+++|.
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~--~~~~~~~~g----------~~~~~~~~~~~~~~~~vv~pd~ 221 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDN--YLQVAGNRG----------AVVWAQPRYQVVHPCFVLAPQC 221 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSS--SHHHHSSTT----------TTGGGSHHHHTTSCCEEEEECC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCch--hhhhhcccc----------ceeecCccccccCCEEEEEecC
Confidence 688888876643 226899999998765432 111121100 00000 001125789999999
Q ss_pred CCCCCCCCCC------CCCccchHhHHHHHHHHHHHhCCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 94 RGMGRSSVPV------KKTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 94 ~G~G~S~~~~------~~~~~~~~~~~~dl~~~l~~~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
+|.+...... .......++..+.+..+++..+.+ +++|+||||||.+++.++.++|++++++|++++..
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~--- 298 (380)
T 3doh_A 222 PPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGG--- 298 (380)
T ss_dssp CTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC---
T ss_pred CCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCC---
Confidence 9866532211 011335666777777777777654 79999999999999999999999999999999751
Q ss_pred CCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhh
Q 018750 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (351)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
.
T Consensus 299 ---------------------------------------------~---------------------------------- 299 (380)
T 3doh_A 299 ---------------------------------------------D---------------------------------- 299 (380)
T ss_dssp ---------------------------------------------C----------------------------------
T ss_pred ---------------------------------------------C----------------------------------
Confidence 0
Q ss_pred cccCCHHHHHHhhccC-ccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCCC-cccc----ccChHHHHH--HH
Q 018750 246 MHKMTQKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGG-HLVS----HERTEEVNQ--AL 314 (351)
Q Consensus 246 ~~~~~~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gg-H~~~----~~~p~~~~~--~i 314 (351)
...+..++ +|+|+++|++|.++|++.++.+.+.+. .+.++++++++ |..+ +........ .+
T Consensus 300 --------~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~~~~~~i 371 (380)
T 3doh_A 300 --------VSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPTYENQEA 371 (380)
T ss_dssp --------GGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHHHTCHHH
T ss_pred --------hhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHhcCCHHH
Confidence 00112233 799999999999999998888887762 35788999974 2211 223344444 88
Q ss_pred HHHHHhc
Q 018750 315 IDLIKAS 321 (351)
Q Consensus 315 ~~fl~~~ 321 (351)
.+||.+.
T Consensus 372 ~~wL~~~ 378 (380)
T 3doh_A 372 IEWLFEQ 378 (380)
T ss_dssp HHHHHTC
T ss_pred HHHHHhh
Confidence 8999764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-17 Score=157.15 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=138.0
Q ss_pred cccCCeEEEEEEcC-------CCCCeEEEEecCCCCc--cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 20 LNDNGIKIFYRTYG-------RGPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 20 ~~~~g~~l~y~~~g-------~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
...+|.+|.+.... ...|+||++||..+.. ..|......|.+ +||.|++
T Consensus 431 ~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~ 488 (693)
T 3iuj_A 431 QSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLD----------------------LGGVYAV 488 (693)
T ss_dssp ECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHH----------------------TTCEEEE
T ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHH----------------------CCCEEEE
Confidence 34578777765431 2357899999976644 346666666766 6999999
Q ss_pred ecCCCCCCCCCC------CCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 91 FDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 91 ~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+|+||.|..... .......++|+++.+..+++.- ..+++.++|||+||.+++.++.++|++++++|+.++..
T Consensus 489 ~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~ 568 (693)
T 3iuj_A 489 ANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVL 568 (693)
T ss_dssp ECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred EeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcc
Confidence 999999876321 0001123445555444444431 23689999999999999999999999999999988763
Q ss_pred CCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhh
Q 018750 163 GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (351)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
... .. .. . .... .+... ++.......... ++..
T Consensus 569 d~~---------~~------~~-~--------~~~~----~~~~~-~g~p~~~~~~~~-~~~~----------------- 601 (693)
T 3iuj_A 569 DML---------RY------HT-F--------TAGT----GWAYD-YGTSADSEAMFD-YLKG----------------- 601 (693)
T ss_dssp CTT---------TG------GG-S--------GGGG----GCHHH-HCCTTSCHHHHH-HHHH-----------------
T ss_pred hhh---------hh------cc-C--------CCch----hHHHH-cCCccCHHHHHH-HHHh-----------------
Confidence 110 00 00 0 0000 00001 111111000000 0000
Q ss_pred hhhcccCCHHHHHHhhc-cCcc-EEEEeecCCccCCHHHHHHHHHHhC------CCceEEEcCC-Cccccc--cChHHHH
Q 018750 243 ACWMHKMTQKDIQTIRS-AGFL-VSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPG-GHLVSH--ERTEEVN 311 (351)
Q Consensus 243 ~~~~~~~~~~~~~~l~~-i~~P-vlii~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~g-gH~~~~--~~p~~~~ 311 (351)
......+.. +++| +|+++|++|..+++..+..+.+.+. ...+++++++ ||.... ++..+..
T Consensus 602 --------~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 673 (693)
T 3iuj_A 602 --------YSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQS 673 (693)
T ss_dssp --------HCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHH
T ss_pred --------cCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHH
Confidence 112345566 7887 9999999999999999988888762 2357888888 998764 4667788
Q ss_pred HHHHHHHHhcCC
Q 018750 312 QALIDLIKASEK 323 (351)
Q Consensus 312 ~~i~~fl~~~~~ 323 (351)
+.+.+||.+...
T Consensus 674 ~~~~~fl~~~l~ 685 (693)
T 3iuj_A 674 ADIYAFTLYEMG 685 (693)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 889999987654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-17 Score=160.16 Aligned_cols=229 Identities=14% Similarity=0.072 Sum_probs=140.4
Q ss_pred cccCCeEEEEEEc---C----CCCCeEEEEecCCCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 20 LNDNGIKIFYRTY---G----RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 20 ~~~~g~~l~y~~~---g----~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
...+|.++.+... + ...|+||++||.++... .|......|++ +||.|++
T Consensus 486 ~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~ 543 (751)
T 2xe4_A 486 TAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCD----------------------RGMIFAI 543 (751)
T ss_dssp ECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHT----------------------TTCEEEE
T ss_pred ECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHh----------------------CCcEEEE
Confidence 3457877775432 2 23578999999877654 46666667776 6999999
Q ss_pred ecCCCCCCCCCC----C---CCCccchHhHHHHHHHHHHH--hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 91 FDNRGMGRSSVP----V---KKTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 91 ~D~~G~G~S~~~----~---~~~~~~~~~~~~dl~~~l~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+|+||+|.+... . .....+++|+++.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+.++.
T Consensus 544 ~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~ 623 (751)
T 2xe4_A 544 AHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPF 623 (751)
T ss_dssp ECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred EeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCc
Confidence 999999976321 1 00123456666666666654 23468999999999999999999999999999999875
Q ss_pred CCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhh
Q 018750 162 GGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQI 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
. +.... ......+.. .... ..++.. ........ ...
T Consensus 624 ~---------d~~~~-----~~~~~~~~~-----------~~~~-~~~g~p-~~~~~~~~-~~~---------------- 659 (751)
T 2xe4_A 624 V---------DVMTT-----MCDPSIPLT-----------TGEW-EEWGNP-NEYKYYDY-MLS---------------- 659 (751)
T ss_dssp C---------CHHHH-----HTCTTSTTH-----------HHHT-TTTCCT-TSHHHHHH-HHH----------------
T ss_pred c---------hHHhh-----hcccCcccc-----------hhhH-HHcCCC-CCHHHHHH-HHh----------------
Confidence 2 11000 000000000 0000 000111 00000000 000
Q ss_pred hhhhcccCCHHHHHHhhccCcc-EEEEeecCCccCCHHHHHHHHHHhCCC---ce---EEEcCC-CccccccChH--HHH
Q 018750 242 HACWMHKMTQKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKLYPV---AR---MIDLPG-GHLVSHERTE--EVN 311 (351)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~~~~---~~---~~~~~g-gH~~~~~~p~--~~~ 311 (351)
......+.++++| +|+++|++|..+|+..+.++.+.+... .+ +.++++ ||......++ +..
T Consensus 660 ---------~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 730 (751)
T 2xe4_A 660 ---------YSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKES 730 (751)
T ss_dssp ---------HCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHH
T ss_pred ---------cChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHH
Confidence 0011234567787 999999999999999998888876211 23 344487 9988755443 445
Q ss_pred HHHHHHHHhcCC
Q 018750 312 QALIDLIKASEK 323 (351)
Q Consensus 312 ~~i~~fl~~~~~ 323 (351)
..+.+||.+...
T Consensus 731 ~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 731 AIQQAFVCKHLK 742 (751)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 678899987654
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.6e-17 Score=143.56 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=56.5
Q ss_pred CCeEEEEecCCCCCCCCCCCCCC------ccchHhHHHHHHHHHHHhCC---cceEEEEEchhhHHHHHHHHhCCc----
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKKT------EYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMVPE---- 150 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~------~~~~~~~~~dl~~~l~~~~~---~~v~lvG~S~Gg~~a~~~a~~~p~---- 150 (351)
+||.|+++|+||+|.|....... ..++.+.++.+..+++.++. ++++++||||||.+++.+|...|+
T Consensus 109 ~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~ 188 (377)
T 4ezi_A 109 AGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPD 188 (377)
T ss_dssp TCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTT
T ss_pred CCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCC
Confidence 79999999999999998522111 11233444445556666554 689999999999999999988665
Q ss_pred -ccceEEEeccC
Q 018750 151 -RVLSLALLNVT 161 (351)
Q Consensus 151 -~v~~lvl~~~~ 161 (351)
.+.+.+..+++
T Consensus 189 l~l~g~~~~~~p 200 (377)
T 4ezi_A 189 LPVSAVAPGSAP 200 (377)
T ss_dssp SCCCEEEEESCC
T ss_pred CceEEEEecCcc
Confidence 47777777765
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-17 Score=137.37 Aligned_cols=203 Identities=13% Similarity=0.065 Sum_probs=129.8
Q ss_pred CCeEEEEecCCCCccchHH--HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 36 PTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
.|+||++||++++...|.. .+..+... .|+.|+++|.++++.+..+.. ....+.+
T Consensus 41 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~~~~~~--~~~~~~~ 97 (263)
T 2uz0_A 41 IPVLYLLHGMSGNHNSWLKRTNVERLLRG---------------------TNLIVVMPNTSNGWYTDTQYG--FDYYTAL 97 (263)
T ss_dssp BCEEEEECCTTCCTTHHHHHSCHHHHTTT---------------------CCCEEEECCCTTSTTSBCTTS--CBHHHHH
T ss_pred CCEEEEECCCCCCHHHHHhccCHHHHHhc---------------------CCeEEEEECCCCCccccCCCc--ccHHHHH
Confidence 4789999999999988877 45555431 489999999998887765432 2235677
Q ss_pred HHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCC
Q 018750 114 AKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT 187 (351)
Q Consensus 114 ~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (351)
++++..+++.. +.++++++|||+||.+|+.++. +|++++++|++++...... .+ .. .. ..
T Consensus 98 ~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~-~~---~~-------~~-~~- 163 (263)
T 2uz0_A 98 AEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQN-FS---PE-------SQ-NL- 163 (263)
T ss_dssp HTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSS-CC---GG-------GT-TC-
T ss_pred HHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhh-cc---cc-------cc-cc-
Confidence 78888888874 2368999999999999999999 9999999999998742111 00 00 00 00
Q ss_pred HHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccC--ccEE
Q 018750 188 PEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG--FLVS 265 (351)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvl 265 (351)
.........+...... .+ ...+....+.++. +|++
T Consensus 164 ------------~~~~~~~~~~~~~~~~----------------------------~~---~~~~~~~~~~~~~~~~p~l 200 (263)
T 2uz0_A 164 ------------GSPAYWRGVFGEIRDW----------------------------TT---SPYSLESLAKKSDKKTKLW 200 (263)
T ss_dssp ------------SCHHHHHHHHCCCSCT----------------------------TT---STTSHHHHGGGCCSCSEEE
T ss_pred ------------ccchhHHHHcCChhhh----------------------------cc---ccCCHHHHHHhccCCCeEE
Confidence 0001111111111000 00 0112223344443 7999
Q ss_pred EEeecCCccCCHHHHHHHHHHh---CCCceEEEcCCCccccccChHHHHHHHHHHHHhcC
Q 018750 266 VIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
+++|++|.+++. .+.+.+.+ ..+.++++++|||.... .++..+.+.+||.+.-
T Consensus 201 i~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~H~~~~--~~~~~~~~~~~l~~~l 256 (263)
T 2uz0_A 201 AWCGEQDFLYEA--NNLAVKNLKKLGFDVTYSHSAGTHEWYY--WEKQLEVFLTTLPIDF 256 (263)
T ss_dssp EEEETTSTTHHH--HHHHHHHHHHTTCEEEEEEESCCSSHHH--HHHHHHHHHHHSSSCC
T ss_pred EEeCCCchhhHH--HHHHHHHHHHCCCCeEEEECCCCcCHHH--HHHHHHHHHHHHHhhc
Confidence 999999998852 34454444 23568888999996532 2456677888887654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-17 Score=158.95 Aligned_cols=225 Identities=12% Similarity=0.065 Sum_probs=138.3
Q ss_pred cccCCeEEEEEEcC-------CCCCeEEEEecCCCCcc--chHHHH-HHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 20 LNDNGIKIFYRTYG-------RGPTKVILITGLAGTHD--AWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 20 ~~~~g~~l~y~~~g-------~~~p~vv~~HG~~~~~~--~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
...+|.+|.+.... ...|+||++||.++... .|.... ..+.. +||.|+
T Consensus 443 ~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~----------------------~G~~v~ 500 (710)
T 2xdw_A 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRH----------------------MGGVLA 500 (710)
T ss_dssp ECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHH----------------------HCCEEE
T ss_pred EcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHh----------------------CCcEEE
Confidence 34578888766542 23578999999876654 344433 33441 299999
Q ss_pred EecCCCCCCCCCC------CCCCccchHhHHHHHHHHHHH--hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 90 AFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 90 ~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~--~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
++|+||+|.+... .......++|+++.+..+++. ...++++++|||+||.+++.++.++|++++++|+.++.
T Consensus 501 ~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~ 580 (710)
T 2xdw_A 501 VANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGV 580 (710)
T ss_dssp EECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred EEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCc
Confidence 9999999976321 000112334444444444443 13468999999999999999999999999999999876
Q ss_pred CCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhh
Q 018750 162 GGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQI 241 (351)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
..... . ..... . ..+...+ +... .......+ ....
T Consensus 581 ~d~~~------~---------~~~~~---------~----~~~~~~~-g~~~-~~~~~~~~-~~~s-------------- 615 (710)
T 2xdw_A 581 MDMLK------F---------HKYTI---------G----HAWTTDY-GCSD-SKQHFEWL-IKYS-------------- 615 (710)
T ss_dssp CCTTT------G---------GGSTT---------G----GGGHHHH-CCTT-SHHHHHHH-HHHC--------------
T ss_pred ccHhh------c---------cccCC---------C----hhHHHhC-CCCC-CHHHHHHH-HHhC--------------
Confidence 31100 0 00000 0 0001111 1110 00001111 0000
Q ss_pred hhhhcccCCHHHHHHhh-----ccCc-cEEEEeecCCccCCHHHHHHHHHHhC----------CCceEEEcCC-Cccccc
Q 018750 242 HACWMHKMTQKDIQTIR-----SAGF-LVSVIHGRHDVIAQICYARRLAEKLY----------PVARMIDLPG-GHLVSH 304 (351)
Q Consensus 242 ~~~~~~~~~~~~~~~l~-----~i~~-Pvlii~g~~D~~~~~~~~~~~~~~~~----------~~~~~~~~~g-gH~~~~ 304 (351)
....+. .+++ |+|+++|++|..+++..+..+.+.+. ...+++++++ ||....
T Consensus 616 -----------p~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 684 (710)
T 2xdw_A 616 -----------PLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGK 684 (710)
T ss_dssp -----------GGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTC
T ss_pred -----------cHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCC
Confidence 011223 5676 99999999999999999888887762 2347888888 998765
Q ss_pred c--ChHHHHHHHHHHHHhcC
Q 018750 305 E--RTEEVNQALIDLIKASE 322 (351)
Q Consensus 305 ~--~p~~~~~~i~~fl~~~~ 322 (351)
. ++.++.+.+.+||.+..
T Consensus 685 ~~~~~~~~~~~~~~fl~~~l 704 (710)
T 2xdw_A 685 PTAKVIEEVSDMFAFIARCL 704 (710)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHc
Confidence 3 45688889999998754
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-18 Score=151.73 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=78.8
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC-----------
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV----------- 103 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~----------- 103 (351)
+.|+|||+||++++...|..++..|++ +||.|+++|+||+|.|....
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~----------------------~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~ 154 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLAS----------------------HGFIVAAVEHRDRSASATYYFKDQSAAEIGD 154 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHH----------------------TTCEEEEECCCSSCSSEEEECSSHHHHHHTC
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHh----------------------CceEEEEeccCCCCccceeecCCccccccCC
Confidence 457899999999999999999999998 79999999999999875210
Q ss_pred ----------CCCc-----cchHhHHHHHHHHHHHh--------------------------CCcceEEEEEchhhHHHH
Q 018750 104 ----------KKTE-----YTTKIMAKDVIALMDHL--------------------------GWKQAHVFGHSMGAMIAC 142 (351)
Q Consensus 104 ----------~~~~-----~~~~~~~~dl~~~l~~~--------------------------~~~~v~lvG~S~Gg~~a~ 142 (351)
.... ..++..++|+..+++.+ +.+++.++||||||.+++
T Consensus 155 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~ 234 (383)
T 3d59_A 155 KSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVI 234 (383)
T ss_dssp CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHH
T ss_pred ceeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHH
Confidence 0000 11223355666555433 234799999999999999
Q ss_pred HHHHhCCcccceEEEeccC
Q 018750 143 KLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 143 ~~a~~~p~~v~~lvl~~~~ 161 (351)
.++...+ +|+++|++++.
T Consensus 235 ~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 235 QTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp HHHHHCT-TCCEEEEESCC
T ss_pred HHHhhCC-CccEEEEeCCc
Confidence 9988766 69999999864
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=9.7e-17 Score=137.43 Aligned_cols=118 Identities=19% Similarity=0.240 Sum_probs=83.5
Q ss_pred cCCeEEEEEEcCC-------CCCeEEEEecCCCCccchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 22 DNGIKIFYRTYGR-------GPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 22 ~~g~~l~y~~~g~-------~~p~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
..|..+.+..+-+ ..|+||++||++++...|.. +...+.+ .|+.|+++
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~ 81 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAE----------------------LGIAIVAP 81 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHH----------------------HTCEEEEC
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhh----------------------CCeEEEEe
Confidence 3566676655432 23689999999998877754 3344444 59999999
Q ss_pred cCCCCCCCCCCCCC-------------------Cccc-hHhHHHHHHHHHHHh-CC-cceEEEEEchhhHHHHHHHHhCC
Q 018750 92 DNRGMGRSSVPVKK-------------------TEYT-TKIMAKDVIALMDHL-GW-KQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 92 D~~G~G~S~~~~~~-------------------~~~~-~~~~~~dl~~~l~~~-~~-~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
|.+++|.+...... .... ...+.+++..+++.. .. ++++|+||||||.+|+.++.++|
T Consensus 82 d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p 161 (280)
T 3ls2_A 82 DTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNP 161 (280)
T ss_dssp CSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHST
T ss_pred CCcccccccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCc
Confidence 99877765322100 0011 233455666666654 22 68999999999999999999999
Q ss_pred cccceEEEeccC
Q 018750 150 ERVLSLALLNVT 161 (351)
Q Consensus 150 ~~v~~lvl~~~~ 161 (351)
+++++++++++.
T Consensus 162 ~~~~~~~~~s~~ 173 (280)
T 3ls2_A 162 QDYVSASAFSPI 173 (280)
T ss_dssp TTCSCEEEESCC
T ss_pred hhheEEEEecCc
Confidence 999999999985
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-16 Score=152.92 Aligned_cols=213 Identities=13% Similarity=0.050 Sum_probs=121.3
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC--------------------cceEEEEEchhhHH
Q 018750 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--------------------KQAHVFGHSMGAMI 140 (351)
Q Consensus 81 ~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--------------------~~v~lvG~S~Gg~~ 140 (351)
++++||.|+++|.||+|.|+.... .++ .+.++|+.++++.+.. ++|.++||||||.+
T Consensus 277 la~~GYaVv~~D~RG~G~S~G~~~--~~~-~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~i 353 (763)
T 1lns_A 277 FLTRGFASIYVAGVGTRSSDGFQT--SGD-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTM 353 (763)
T ss_dssp HHTTTCEEEEECCTTSTTSCSCCC--TTS-HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHH
T ss_pred HHHCCCEEEEECCCcCCCCCCcCC--CCC-HHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHH
Confidence 334899999999999999986542 233 3567888888888762 47999999999999
Q ss_pred HHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhc---c--cCCH----HHHhhcCccccccHHHHHHhhcC
Q 018750 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF---R--AKTP----EKRAAVDLDTHYSQEYLEEYVGS 211 (351)
Q Consensus 141 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 211 (351)
++.+|..+|+.++++|..++... .. ...+.. . ...+ ...................
T Consensus 354 al~~Aa~~p~~lkaiV~~~~~~d---------~~---~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~---- 417 (763)
T 1lns_A 354 AYGAATTGVEGLELILAEAGISS---------WY---NYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLK---- 417 (763)
T ss_dssp HHHHHTTTCTTEEEEEEESCCSB---------HH---HHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHH----
T ss_pred HHHHHHhCCcccEEEEEeccccc---------HH---HHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchhhh----
Confidence 99999999999999999987531 00 000000 0 0000 0000000000000000000
Q ss_pred CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC--
Q 018750 212 STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-- 289 (351)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-- 289 (351)
.......+...+..........+ ...|.. .+....+.+|++|+|+|+|.+|..+++..+.++.+.+..
T Consensus 418 ---~~~~~~~~~~~~~~~~~~~~~~~----~~~w~~---~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~ 487 (763)
T 1lns_A 418 ---GNAEYEKRLAEMTAALDRKSGDY----NQFWHD---RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGH 487 (763)
T ss_dssp ---HHHHHHHHHHHHHHHHCTTTCCC----CHHHHT---TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTC
T ss_pred ---HHHHHHHHHHHHHhhhhhccCch----hHHhhc---cChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCC
Confidence 00000111111100000000000 011111 122356788999999999999999999999999998842
Q ss_pred CceEEEcCCCcccccc-ChHHHHHHHHHHHHhcC
Q 018750 290 VARMIDLPGGHLVSHE-RTEEVNQALIDLIKASE 322 (351)
Q Consensus 290 ~~~~~~~~ggH~~~~~-~p~~~~~~i~~fl~~~~ 322 (351)
..++++.++||..+.+ .++++.+.+.+||+...
T Consensus 488 ~~~l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~~L 521 (763)
T 1lns_A 488 AKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKL 521 (763)
T ss_dssp CEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred CeEEEEeCCcccCccccchHHHHHHHHHHHHHHh
Confidence 2455554569987654 44556666666666543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=136.14 Aligned_cols=117 Identities=20% Similarity=0.193 Sum_probs=80.6
Q ss_pred CCeEEEEEEcC------CCCCeEEEEecCCCCccchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 23 NGIKIFYRTYG------RGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 23 ~g~~l~y~~~g------~~~p~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.|..+.+..+- ...|+||++||++++...|.. +...+.+ .|+.|+++|.
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~d~ 89 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAE----------------------HQVIVVAPDT 89 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHH----------------------HTCEEEEECS
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhh----------------------CCeEEEEecc
Confidence 45666555442 234689999999998877643 3344444 5899999998
Q ss_pred CCCCCCCCC--------------CC-C----Cccc-hHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcc
Q 018750 94 RGMGRSSVP--------------VK-K----TEYT-TKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPER 151 (351)
Q Consensus 94 ~G~G~S~~~--------------~~-~----~~~~-~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 151 (351)
+++|.+... .. . ..+. ...+++++..+++.. ..++++|+||||||.+|+.++.++|++
T Consensus 90 ~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~ 169 (283)
T 4b6g_A 90 SPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQER 169 (283)
T ss_dssp SCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGG
T ss_pred ccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCcc
Confidence 744432111 00 0 0112 333456777777766 236899999999999999999999999
Q ss_pred cceEEEeccC
Q 018750 152 VLSLALLNVT 161 (351)
Q Consensus 152 v~~lvl~~~~ 161 (351)
+++++++++.
T Consensus 170 ~~~~~~~s~~ 179 (283)
T 4b6g_A 170 YQSVSAFSPI 179 (283)
T ss_dssp CSCEEEESCC
T ss_pred ceeEEEECCc
Confidence 9999999986
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-17 Score=125.29 Aligned_cols=99 Identities=20% Similarity=0.338 Sum_probs=85.5
Q ss_pred cccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
.+++.+|.+++|...|++ |+|||+| ++...|..+ |.+ +|+|+++|+||||
T Consensus 5 ~~~~~~g~~~~~~~~g~~-~~vv~~H---~~~~~~~~~---l~~-----------------------~~~v~~~d~~G~G 54 (131)
T 2dst_A 5 GYLHLYGLNLVFDRVGKG-PPVLLVA---EEASRWPEA---LPE-----------------------GYAFYLLDLPGYG 54 (131)
T ss_dssp EEEEETTEEEEEEEECCS-SEEEEES---SSGGGCCSC---CCT-----------------------TSEEEEECCTTST
T ss_pred EEEEECCEEEEEEEcCCC-CeEEEEc---CCHHHHHHH---HhC-----------------------CcEEEEECCCCCC
Confidence 456788999999999875 5799999 555667665 655 7999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
.|..+.. . ++++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 55 ~s~~~~~--~--~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 55 RTEGPRM--A--PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp TCCCCCC--C--HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCCCCC--C--HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 9987654 2 89999999999999998999999999999999999999884
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-18 Score=153.38 Aligned_cols=105 Identities=21% Similarity=0.322 Sum_probs=88.0
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe---EEEEecCCCCCCC-----CCCC---
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI---EVCAFDNRGMGRS-----SVPV--- 103 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~---~vi~~D~~G~G~S-----~~~~--- 103 (351)
+.++|||+||++++...|..+++.|.+ +|| +|+++|++|+|.| +...
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~----------------------~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~ 78 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAA----------------------NGYPAEYVKTFEYDTISWALVVETDMLFSGL 78 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHH----------------------TTCCGGGEEEECCCHHHHHHHTTTSTTTTTG
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH----------------------cCCCcceEEEEECCCCCcccccccccccccc
Confidence 346799999999999999999999987 689 7999999999976 1100
Q ss_pred --------------------------CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC---cccce
Q 018750 104 --------------------------KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLS 154 (351)
Q Consensus 104 --------------------------~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~ 154 (351)
.....+.+++++++.++++.++.++++++||||||.+++.++.++| ++|++
T Consensus 79 ~~~~G~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~ 158 (484)
T 2zyr_A 79 GSEFGLNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAH 158 (484)
T ss_dssp GGHHHHHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEE
T ss_pred ccccccccccccccccccccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCE
Confidence 0012356677788888888889899999999999999999999998 48999
Q ss_pred EEEeccC
Q 018750 155 LALLNVT 161 (351)
Q Consensus 155 lvl~~~~ 161 (351)
+|+++++
T Consensus 159 LVlIapp 165 (484)
T 2zyr_A 159 LILLDGV 165 (484)
T ss_dssp EEEESCC
T ss_pred EEEECCc
Confidence 9999976
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.5e-16 Score=148.61 Aligned_cols=226 Identities=12% Similarity=0.023 Sum_probs=138.3
Q ss_pred ccccCCeEEEEEEcC-------CCCCeEEEEecCCCCcc--chHHHH-HHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 19 ALNDNGIKIFYRTYG-------RGPTKVILITGLAGTHD--AWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g-------~~~p~vv~~HG~~~~~~--~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
+...+|.+|.+.... ...|+||++||.++... .|.... ..|.+ +||.|
T Consensus 454 ~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~----------------------~Gy~V 511 (711)
T 4hvt_A 454 ATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVK----------------------NAGVS 511 (711)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGG----------------------GTCEE
T ss_pred EECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHH----------------------CCCEE
Confidence 344578888765432 23578999999866543 344444 36666 69999
Q ss_pred EEecCCCCCCCCCC------CCCCccchHhHHHHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 89 CAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 89 i~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
+.+|.||+|.+... .......++|+.+.+..+++.- ..+++.++|+|+||.+++.++.++|++++++|..++
T Consensus 512 v~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~p 591 (711)
T 4hvt_A 512 VLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVP 591 (711)
T ss_dssp EEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESC
T ss_pred EEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCC
Confidence 99999999876421 1101223344444444444332 226899999999999999999999999999999887
Q ss_pred CCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchh
Q 018750 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (351)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (351)
..... . +..... ...+...+ +.... ....+ .....
T Consensus 592 v~D~~---------~------~~~~~~-------------~~~~~~~~-G~p~~-~~~~~-~l~~~-------------- 626 (711)
T 4hvt_A 592 ILDMI---------R------YKEFGA-------------GHSWVTEY-GDPEI-PNDLL-HIKKY-------------- 626 (711)
T ss_dssp CCCTT---------T------GGGSTT-------------GGGGHHHH-CCTTS-HHHHH-HHHHH--------------
T ss_pred ccchh---------h------hhcccc-------------chHHHHHh-CCCcC-HHHHH-HHHHc--------------
Confidence 63110 0 000000 00011111 11110 00000 11110
Q ss_pred hhhhhcccCCHHHHHHhhccCc--cEEEEeecCCccCCHHHHHHHHHHh-C---CCceEEEcCC-Cccccc--cChHHHH
Q 018750 241 IHACWMHKMTQKDIQTIRSAGF--LVSVIHGRHDVIAQICYARRLAEKL-Y---PVARMIDLPG-GHLVSH--ERTEEVN 311 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~--Pvlii~g~~D~~~~~~~~~~~~~~~-~---~~~~~~~~~g-gH~~~~--~~p~~~~ 311 (351)
.....+.++++ |+|+++|++|..+|+..+..+.+.+ . ...+++++++ ||.... ++..+..
T Consensus 627 -----------SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~ 695 (711)
T 4hvt_A 627 -----------APLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYF 695 (711)
T ss_dssp -----------CGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHH
T ss_pred -----------CHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHH
Confidence 11123345566 9999999999999999999998887 3 3578889998 998643 2345566
Q ss_pred HHHHHHHHhcC
Q 018750 312 QALIDLIKASE 322 (351)
Q Consensus 312 ~~i~~fl~~~~ 322 (351)
+.+.+||.+..
T Consensus 696 ~~i~~FL~~~L 706 (711)
T 4hvt_A 696 INLYTFFANAL 706 (711)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 67888887653
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-17 Score=142.35 Aligned_cols=104 Identities=22% Similarity=0.340 Sum_probs=93.8
Q ss_pred CCCCCeEEEEecCCCCc------cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 018750 33 GRGPTKVILITGLAGTH------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 106 (351)
.+.+|+|||+||++++. ..|..+.+.|.+ +||+|+++|+||+|.|..+
T Consensus 5 ~~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~----------------------~G~~V~~~d~~g~g~s~~~---- 58 (320)
T 1ys1_X 5 AATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQ----------------------RGATVYVANLSGFQSDDGP---- 58 (320)
T ss_dssp TCCSSCEEEECCTTCCSEETTTEESSTTHHHHHHH----------------------TTCCEEECCCCSSCCSSST----
T ss_pred CCCCCEEEEECCCCCCccccchHHHHHHHHHHHHh----------------------CCCEEEEEcCCCCCCCCCC----
Confidence 34567899999999888 789999999988 6999999999999999654
Q ss_pred ccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
..+.+++++++.++++.++.++++|+||||||.++..++.++|++|+++|+++++.
T Consensus 59 ~~~~~~l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 59 NGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp TSHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 34789999999999999998999999999999999999999999999999999864
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-16 Score=131.94 Aligned_cols=189 Identities=17% Similarity=0.158 Sum_probs=122.4
Q ss_pred EEEEEEcCC---CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC------
Q 018750 26 KIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM------ 96 (351)
Q Consensus 26 ~l~y~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~------ 96 (351)
.+.|....+ .+++|||+||+|++...|..+.+.+...+ .++.+++++-|-.
T Consensus 24 ~l~y~ii~P~~~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~--------------------~~~~~i~P~Ap~~~~~~~~ 83 (246)
T 4f21_A 24 AMNYELMEPAKQARFCVIWLHGLGADGHDFVDIVNYFDVSL--------------------DEIRFIFPHADIIPVTINM 83 (246)
T ss_dssp CCCEEEECCSSCCCEEEEEEEC--CCCCCGGGGGGGCCSCC--------------------TTEEEEEECGGGSCTTTHH
T ss_pred CcCceEeCCCCcCCeEEEEEcCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEeCCCCccccccCC
Confidence 445554443 34589999999999999988888776421 2788898875421
Q ss_pred -----CC---CCCCCC-----CCccchHhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEe
Q 018750 97 -----GR---SSVPVK-----KTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (351)
Q Consensus 97 -----G~---S~~~~~-----~~~~~~~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~ 158 (351)
.. ...... ...-.+...++.+..+++.. ..++++++|+|+||++++.++.++|+++.++|.+
T Consensus 84 ~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~ 163 (246)
T 4f21_A 84 GMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMAL 163 (246)
T ss_dssp HHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEE
T ss_pred CCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceeh
Confidence 11 110000 00112344555555555432 3468999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcc
Q 018750 159 NVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (351)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (351)
++..+. . ..+ ...
T Consensus 164 sG~lp~------~-------------------------------~~~---~~~--------------------------- 176 (246)
T 4f21_A 164 STYLPA------W-------------------------------DNF---KGK--------------------------- 176 (246)
T ss_dssp SCCCTT------H-------------------------------HHH---STT---------------------------
T ss_pred hhccCc------c-------------------------------ccc---ccc---------------------------
Confidence 875210 0 000 000
Q ss_pred hhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-CccccccChHHHHHHH
Q 018750 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQAL 314 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~p~~~~~~i 314 (351)
. .-...++|++++||++|+++|.+.+++..+.+. -+.++..+++ ||... +++ .+.+
T Consensus 177 ----------~------~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~~ 236 (246)
T 4f21_A 177 ----------I------TSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEE-IKDI 236 (246)
T ss_dssp ----------C------CGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHH-HHHH
T ss_pred ----------c------cccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHH-HHHH
Confidence 0 001124799999999999999999888887762 3568889998 99764 333 4568
Q ss_pred HHHHHhc
Q 018750 315 IDLIKAS 321 (351)
Q Consensus 315 ~~fl~~~ 321 (351)
.+||++.
T Consensus 237 ~~fL~k~ 243 (246)
T 4f21_A 237 SNFIAKT 243 (246)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888764
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.3e-17 Score=138.49 Aligned_cols=102 Identities=16% Similarity=0.149 Sum_probs=85.8
Q ss_pred CCCeEEEEecCCCCc-cchH-HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTH-DAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
.+++|||+||++++. ..|. .+.+.|.+ +||+|+++|+||||.++. ..+.++
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~----------------------~Gy~V~a~DlpG~G~~~~-----~~~~~~ 116 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQ----------------------LGYTPCWISPPPFMLNDT-----QVNTEY 116 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHH----------------------TTCEEEEECCTTTTCSCH-----HHHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHH----------------------CCCeEEEecCCCCCCCcH-----HHHHHH
Confidence 345799999999987 6898 89999987 699999999999997642 335667
Q ss_pred HHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC---CcccceEEEeccCCC
Q 018750 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGG 163 (351)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~ 163 (351)
+.+.+.++++..+.++++||||||||.++..++..+ +++|+++|+++++..
T Consensus 117 la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 117 MVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 777888888888889999999999999998777765 589999999998753
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.4e-17 Score=147.45 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=90.8
Q ss_pred CCCeEEEEecCCCCc-cchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
..|+||++||++++. ..|.. +.+.|.+. .+|+|+++|++|+|.|..+. ...+++.
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~---------------------~~~~Vi~~D~~g~G~S~~~~--~~~~~~~ 125 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQV---------------------ETTNCISVDWSSGAKAEYTQ--AVQNIRI 125 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTT---------------------SCCEEEEEECHHHHTSCHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhh---------------------CCCEEEEEecccccccccHH--HHHhHHH
Confidence 457899999999988 67877 77777651 38999999999999986332 2456778
Q ss_pred HHHHHHHHHHHh----C--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 113 MAKDVIALMDHL----G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 113 ~~~dl~~~l~~~----~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
+++|+.++++.+ + .++++|+||||||.+|..+|.++|++|.++|+++|+.+.+
T Consensus 126 ~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p~f 184 (452)
T 1w52_X 126 VGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEPCF 184 (452)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTT
T ss_pred HHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccccc
Confidence 888999988887 5 6799999999999999999999999999999999886543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.1e-17 Score=147.12 Aligned_cols=108 Identities=19% Similarity=0.351 Sum_probs=90.7
Q ss_pred CCCeEEEEecCCCCc-cchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
..|+||++||++++. ..|.. +.+.|.+. .+|+|+++|+||+|.|..+. ...++..
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~---------------------~~~~Vi~~D~~G~G~S~~~~--~~~~~~~ 125 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQV---------------------EKVNCICVDWRRGSRTEYTQ--ASYNTRV 125 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTT---------------------CCEEEEEEECHHHHSSCHHH--HHHHHHH
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhh---------------------CCCEEEEEechhcccCchhH--hHhhHHH
Confidence 457899999999988 78887 66777651 38999999999999987332 2456778
Q ss_pred HHHHHHHHHHHh----CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCC
Q 018750 113 MAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (351)
Q Consensus 113 ~~~dl~~~l~~~----~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
+++|+.++++.+ +. ++++|+||||||.+|+.+|.++|++|.++|+++|+.+.+
T Consensus 126 ~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p~f 184 (452)
T 1bu8_A 126 VGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCF 184 (452)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTT
T ss_pred HHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcccc
Confidence 889999999888 54 799999999999999999999999999999999886544
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=137.23 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=90.2
Q ss_pred CCCCeEEEEecCCCCcc-----chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc
Q 018750 34 RGPTKVILITGLAGTHD-----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (351)
+.+|+|||+||++++.. .|..+.+.|.+ +||+|+++|+||+|.+. .
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~----------------------~G~~v~~~d~~g~g~s~-------~ 55 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR----------------------DGAQVYVTEVSQLDTSE-------V 55 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHH----------------------TTCCEEEECCCSSSCHH-------H
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHh----------------------CCCEEEEEeCCCCCCch-------h
Confidence 45678999999998754 89999999987 69999999999999873 4
Q ss_pred chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 109 TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+.+++++++.++++.++.++++|+||||||.++..++..+|++|+++|+++++.
T Consensus 56 ~~~~~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 56 RGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 789999999999999988899999999999999999999999999999999864
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2e-15 Score=128.49 Aligned_cols=119 Identities=14% Similarity=0.193 Sum_probs=80.3
Q ss_pred CCeEEEEEEcC-------CCCCeEEEEecCCCCccchHHH-------HHHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 23 NGIKIFYRTYG-------RGPTKVILITGLAGTHDAWGPQ-------LKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 23 ~g~~l~y~~~g-------~~~p~vv~~HG~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
.|..+.+..+- .+.|+||++||++++...|... .+.|.+.+. ..+|.|
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~------------------~~~~~v 103 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGK------------------IKPLII 103 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTS------------------SCCCEE
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCC------------------CCCEEE
Confidence 45555554432 2347899999999887666443 566654100 026999
Q ss_pred EEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHH-hCC----cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDH-LGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-~~~----~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+++|.++++.+.... .....++.++++..+++. ++. ++++|+||||||.+++.++.++|+++++++++++.
T Consensus 104 v~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~ 179 (268)
T 1jjf_A 104 VTPNTNAAGPGIADG--YENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 179 (268)
T ss_dssp EEECCCCCCTTCSCH--HHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred EEeCCCCCCcccccc--HHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCC
Confidence 999999987642110 001123335555555553 333 68999999999999999999999999999999975
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=144.22 Aligned_cols=109 Identities=18% Similarity=0.287 Sum_probs=88.1
Q ss_pred CCCCeEEEEecCCCCc-cchHH-HHHHh-cCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccch
Q 018750 34 RGPTKVILITGLAGTH-DAWGP-QLKGL-AGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~-~~~~~-~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (351)
.+.|+||++||++++. ..|.. +.+.| .. .+|+|+++|++|+|.|..+. ..++.
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~----------------------~~~~VI~vD~~g~g~s~y~~--~~~~~ 122 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKV----------------------ESVNCICVDWKSGSRTAYSQ--ASQNV 122 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHH----------------------CCEEEEEEECHHHHSSCHHH--HHHHH
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhc----------------------CCeEEEEEeCCcccCCccHH--HHHHH
Confidence 3467899999999885 57876 66776 22 38999999999999985322 23566
Q ss_pred HhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 111 KIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 111 ~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
+.+++++.++++.+ +.++++||||||||.+|..+|.++|++|.++++++|+.+.+.
T Consensus 123 ~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p~f~ 184 (449)
T 1hpl_A 123 RIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEPCFQ 184 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccccccc
Confidence 77788888888766 468999999999999999999999999999999999876543
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=138.37 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=90.2
Q ss_pred CCeEEEEecCCC----------Cccch----HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeE---EEEecCCCCCC
Q 018750 36 PTKVILITGLAG----------THDAW----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGR 98 (351)
Q Consensus 36 ~p~vv~~HG~~~----------~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~ 98 (351)
+++|||+||+++ +...| ..+++.|.+ +||+ |+++|++|+|.
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~----------------------~Gy~~~~V~~~D~~g~G~ 97 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKA----------------------RGYNDCEIFGVTYLSSSE 97 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHH----------------------TTCCTTSEEEECCSCHHH
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHHHHHHHHh----------------------CCCCCCeEEEEeCCCCCc
Confidence 346999999999 45678 889999887 6898 99999999998
Q ss_pred CCCCC--CCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCCCC
Q 018750 99 SSVPV--KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGG 164 (351)
Q Consensus 99 S~~~~--~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~ 164 (351)
|..+. ....+..+++.+++.++++.++.++++||||||||.++..++.++ |++|+++|+++++..+
T Consensus 98 S~~~~~~~~~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 98 QGSAQYNYHSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HTCGGGCCBCHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred cCCccccCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 86442 113456788888888888888889999999999999999999998 8999999999987543
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-16 Score=141.73 Aligned_cols=109 Identities=17% Similarity=0.291 Sum_probs=88.0
Q ss_pred CCCCeEEEEecCCCCcc-chHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 34 RGPTKVILITGLAGTHD-AWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~-~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
.+.|+||++||++++.. .|.. +.+.|... .+|+|+++|++|+|.|..+. ..++.+
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~---------------------~~~~VI~vD~~g~g~s~y~~--~~~~~~ 124 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKV---------------------EEVNCICVDWKKGSQTSYTQ--AANNVR 124 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTT---------------------CCEEEEEEECHHHHSSCHHH--HHHHHH
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhc---------------------CCeEEEEEeCccccCCcchH--HHHHHH
Confidence 35678999999998875 7866 55665530 37999999999999875322 245677
Q ss_pred hHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 112 IMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 112 ~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
.+++++.++++.+ +.++++||||||||.+|..+|..+|+ |.++++++|+.+.+.
T Consensus 125 ~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p~f~ 184 (450)
T 1rp1_A 125 VVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEASFQ 184 (450)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCTTTT
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccccccc
Confidence 8888888888876 46899999999999999999999999 999999999876543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.63 E-value=4.9e-15 Score=139.46 Aligned_cols=118 Identities=12% Similarity=-0.004 Sum_probs=89.0
Q ss_pred cccccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHH---HH-HHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 18 AALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP---QL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~---~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.+...||.+|++..+.+ ..|+||++||++.....+.. .. ..|++ +||.|+
T Consensus 13 ~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~----------------------~Gy~vv 70 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVR----------------------DGYAVV 70 (587)
T ss_dssp EEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHH----------------------TTCEEE
T ss_pred EEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHH----------------------CCCEEE
Confidence 34455899988765532 23678889998877543222 22 55665 799999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhC-----CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
++|.||+|.|...... ..+.++|+.++++.+. ..++.++|+||||.+++.+|...|+.++++|++++.
T Consensus 71 ~~D~RG~G~S~g~~~~----~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 71 IQDTRGLFASEGEFVP----HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp EEECTTSTTCCSCCCT----TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred EEcCCCCCCCCCcccc----ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 9999999999865431 2456777777777653 258999999999999999999999999999999987
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=9.7e-14 Score=118.81 Aligned_cols=116 Identities=20% Similarity=0.225 Sum_probs=82.0
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCC--CCccchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLA--GTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~--~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
.|..+.+.....++|+||++||++ ++...|.. +...+.+ .|+.|+++|.++.+
T Consensus 21 ~~~~~~~~~~P~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~----------------------~~~~vv~pd~~~~~ 78 (280)
T 1r88_A 21 MGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAG----------------------KGISVVAPAGGAYS 78 (280)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTT----------------------SSSEEEEECCCTTS
T ss_pred cCCcceEEEeCCCCCEEEEECCCCCCCChhhhhhcccHHHHHhc----------------------CCeEEEEECCCCCC
Confidence 456665552223357899999995 45566654 3455555 58999999997642
Q ss_pred -CCCCCCCCCccch-HhHHHHHHHHHHH-hCCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 98 -RSSVPVKKTEYTT-KIMAKDVIALMDH-LGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 98 -~S~~~~~~~~~~~-~~~~~dl~~~l~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
.++.... ....+ ..+++++..+++. ++.+ +++|+|+||||.+|+.++.++|+++++++++++.
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~ 146 (280)
T 1r88_A 79 MYTNWEQD-GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 146 (280)
T ss_dssp TTSBCSSC-TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred ccCCCCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCc
Confidence 2221111 11133 3456788888887 6654 8999999999999999999999999999999986
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-14 Score=121.80 Aligned_cols=117 Identities=21% Similarity=0.210 Sum_probs=83.6
Q ss_pred CeEEEEEEcCCCCCeEEEEecCC--CCccchHHHH---HHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC-
Q 018750 24 GIKIFYRTYGRGPTKVILITGLA--GTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG- 97 (351)
Q Consensus 24 g~~l~y~~~g~~~p~vv~~HG~~--~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G- 97 (351)
+..+.+.......++||++||++ .+...|..+. +.+.+ .++.|+++|.+|..
T Consensus 17 ~~~~~v~~~p~~~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~----------------------~~~~vv~pd~~~~~~ 74 (280)
T 1dqz_A 17 GRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQ----------------------SGLSVIMPVGGQSSF 74 (280)
T ss_dssp TEEEEEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTT----------------------SSSEEEEECCCTTCT
T ss_pred CceeEEEEcCCCCCEEEEECCCCCCCCcccccccCcHHHHHhc----------------------CCeEEEEECCCCCcc
Confidence 45666554433235899999995 4667776543 44555 58999999987542
Q ss_pred CCCCCCCC------CccchHhH-HHHHHHHHHH-hCCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 98 RSSVPVKK------TEYTTKIM-AKDVIALMDH-LGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 98 ~S~~~~~~------~~~~~~~~-~~dl~~~l~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
.++..... ...+++++ ++++..+++. ++.+ +++|+||||||.+|+.++.++|+++++++++++..
T Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 149 (280)
T 1dqz_A 75 YTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp TSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred ccCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcc
Confidence 22211100 13455554 5788888887 6764 89999999999999999999999999999999863
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.5e-14 Score=121.83 Aligned_cols=117 Identities=17% Similarity=0.170 Sum_probs=82.5
Q ss_pred CeEEEEEEcC--CCCCeEEEEecC--CCCccchHHH---HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 24 GIKIFYRTYG--RGPTKVILITGL--AGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 24 g~~l~y~~~g--~~~p~vv~~HG~--~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
+.++.+.... ++.|+||++||+ +++...|... ...+.+ .++.|+++|.++.
T Consensus 20 ~~~i~v~~~p~~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~----------------------~~~~vv~p~~~~~ 77 (304)
T 1sfr_A 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQ----------------------SGLSVVMPVGGQS 77 (304)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTT----------------------SSCEEEEECCCTT
T ss_pred CCceEEEECCCCCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhc----------------------CCeEEEEECCCCC
Confidence 4555554322 345789999999 5566677654 344555 5899999998764
Q ss_pred C-CCCCCCCC------CccchHhH-HHHHHHHHHH-hCCc--ceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 97 G-RSSVPVKK------TEYTTKIM-AKDVIALMDH-LGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 97 G-~S~~~~~~------~~~~~~~~-~~dl~~~l~~-~~~~--~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
. .++..... ....++++ ++++..+++. ++.+ +++|+|+||||.+|+.++.++|+++++++++++..
T Consensus 78 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 154 (304)
T 1sfr_A 78 SFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (304)
T ss_dssp CTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred ccccccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCcc
Confidence 2 22211110 02345555 4788888876 5654 89999999999999999999999999999999863
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.4e-16 Score=139.21 Aligned_cols=106 Identities=17% Similarity=0.277 Sum_probs=87.9
Q ss_pred CCCeEEEEecCCCCc-cchHH-HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
..|+||++||++++. ..|.. +.+.|.+. .+|+|+++|+||+|.|.... ...+.+.
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~---------------------~~~~Vi~~D~~g~g~s~~~~--~~~~~~~ 125 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQV---------------------EKVNCICVDWKGGSKAQYSQ--ASQNIRV 125 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHH---------------------CCEEEEEEECHHHHTSCHHH--HHHHHHH
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhc---------------------CCcEEEEEECccccCccchh--hHhhHHH
Confidence 457899999999998 57877 77777620 28999999999999987322 2446777
Q ss_pred HHHHHHHHHHHh----C--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 113 MAKDVIALMDHL----G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 113 ~~~dl~~~l~~~----~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
+++|+.++++.+ + .++++|+||||||.+|+.+|.++|++|.+++++++..+
T Consensus 126 ~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 126 VGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 888888888876 4 57999999999999999999999999999999998754
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=136.92 Aligned_cols=123 Identities=13% Similarity=-0.038 Sum_probs=86.5
Q ss_pred ccccCCeEEEEEEcCC----CCCeEEEEecCCCCc-------cchHH-HH---HHhcCCCCCCCCchhhhcccccCCCCC
Q 018750 19 ALNDNGIKIFYRTYGR----GPTKVILITGLAGTH-------DAWGP-QL---KGLAGTDKPNDDDETILQDSVESGDGG 83 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~-------~~~~~-~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (351)
+...||.+|++..+.+ ..|+||++||++.+. ..|.. +. ..|++
T Consensus 30 i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~---------------------- 87 (615)
T 1mpx_A 30 IPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVE---------------------- 87 (615)
T ss_dssp EECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHH----------------------
T ss_pred EECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHh----------------------
Confidence 3355898888766532 236788899988753 12322 22 55665
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCc-----cch--HhHHHHHHHHHHHhCC------cceEEEEEchhhHHHHHHHHhCCc
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKKTE-----YTT--KIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~-----~~~--~~~~~dl~~~l~~~~~------~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
+||.|+++|.||+|.|........ +.. ...++|+.++++.+.. .++.++||||||.+++.+|...|+
T Consensus 88 ~Gy~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~ 167 (615)
T 1mpx_A 88 GGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP 167 (615)
T ss_dssp TTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT
T ss_pred CCeEEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCC
Confidence 799999999999999986542110 110 0456666666655422 389999999999999999988899
Q ss_pred ccceEEEeccCCC
Q 018750 151 RVLSLALLNVTGG 163 (351)
Q Consensus 151 ~v~~lvl~~~~~~ 163 (351)
+++++|.+++...
T Consensus 168 ~l~a~v~~~~~~d 180 (615)
T 1mpx_A 168 ALKVAVPESPMID 180 (615)
T ss_dssp TEEEEEEESCCCC
T ss_pred ceEEEEecCCccc
Confidence 9999999998754
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=131.28 Aligned_cols=116 Identities=18% Similarity=0.127 Sum_probs=86.9
Q ss_pred EEEEEEc-----CCCCCeEEEEecCCCCccchH---HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 26 KIFYRTY-----GRGPTKVILITGLAGTHDAWG---PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 26 ~l~y~~~-----g~~~p~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
+.+|... +++.| |||+||..++...+. .....+++. -++.|+++|+||||
T Consensus 24 ~qRy~~~~~~~~~~g~P-i~l~~Ggeg~~~~~~~~~g~~~~lA~~---------------------~~~~Vi~~DhRg~G 81 (446)
T 3n2z_B 24 NQRYLVADKYWKKNGGS-ILFYTGNEGDIIWFCNNTGFMWDVAEE---------------------LKAMLVFAEHRYYG 81 (446)
T ss_dssp EEEEEEECTTCCTTTCE-EEEEECCSSCHHHHHHHCHHHHHHHHH---------------------HTEEEEEECCTTST
T ss_pred EEEEEEehhhcCCCCCC-EEEEeCCCCcchhhhhcccHHHHHHHH---------------------hCCcEEEEecCCCC
Confidence 4455544 34554 899999988765321 234445541 26799999999999
Q ss_pred CCCCCC--------CCCccchHhHHHHHHHHHHHhCC-------cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 98 RSSVPV--------KKTEYTTKIMAKDVIALMDHLGW-------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 98 ~S~~~~--------~~~~~~~~~~~~dl~~~l~~~~~-------~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+|.... .....+.+++++|+..+++.++. .+++++||||||++|+.++.++|+.|.++|+.+++.
T Consensus 82 ~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 82 ESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp TCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred CCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 996432 11234789999999999988754 389999999999999999999999999999987664
Q ss_pred C
Q 018750 163 G 163 (351)
Q Consensus 163 ~ 163 (351)
.
T Consensus 162 ~ 162 (446)
T 3n2z_B 162 W 162 (446)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.9e-15 Score=127.29 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=77.6
Q ss_pred CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
+.++|+|+||++++...|..+...| ++.|+++|+|+ . . ...++++++
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l-------------------------~~~v~~~~~~~--~--~----~~~~~~~~a 91 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRL-------------------------SIPTYGLQCTR--A--A----PLDSIHSLA 91 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHC-------------------------SSCEEEECCCT--T--S----CTTCHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhc-------------------------CCCEEEEECCC--C--C----CcCCHHHHH
Confidence 3456999999999999999888876 26899999992 1 1 245899999
Q ss_pred HHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCC---cc---cceEEEeccCC
Q 018750 115 KDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP---ER---VLSLALLNVTG 162 (351)
Q Consensus 115 ~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p---~~---v~~lvl~~~~~ 162 (351)
+++.+.++.++. ++++++||||||.+|..+|.+.+ ++ +++++++++.+
T Consensus 92 ~~~~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 92 AYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 999999988864 78999999999999999998764 45 89999998763
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-13 Score=130.08 Aligned_cols=123 Identities=12% Similarity=-0.055 Sum_probs=84.5
Q ss_pred ccccCCeEEEEEEcCC----CCCeEEEEecCCCCc--------cchHHH---H-HHhcCCCCCCCCchhhhcccccCCCC
Q 018750 19 ALNDNGIKIFYRTYGR----GPTKVILITGLAGTH--------DAWGPQ---L-KGLAGTDKPNDDDETILQDSVESGDG 82 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~--------~~~~~~---~-~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (351)
+...||.+|+...+.+ ..|+||++||++... ..|... . ..|++
T Consensus 42 i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~--------------------- 100 (652)
T 2b9v_A 42 VPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVE--------------------- 100 (652)
T ss_dssp EECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHH---------------------
T ss_pred EECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHh---------------------
Confidence 3345888887655432 236788889887542 112111 1 55655
Q ss_pred CCCeEEEEecCCCCCCCCCCCCCCc-----cch--HhHHHHHHHHHHHhC----C--cceEEEEEchhhHHHHHHHHhCC
Q 018750 83 GAGIEVCAFDNRGMGRSSVPVKKTE-----YTT--KIMAKDVIALMDHLG----W--KQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 83 ~~g~~vi~~D~~G~G~S~~~~~~~~-----~~~--~~~~~dl~~~l~~~~----~--~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
+||.|+.+|.||+|.|........ +.. ...++|+.++++.+. . .++.++|+||||.+++.+|...|
T Consensus 101 -~GyaVv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~ 179 (652)
T 2b9v_A 101 -GGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH 179 (652)
T ss_dssp -TTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC
T ss_pred -CCCEEEEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCC
Confidence 799999999999999986542110 110 145566666665542 1 37999999999999999998889
Q ss_pred cccceEEEeccCCC
Q 018750 150 ERVLSLALLNVTGG 163 (351)
Q Consensus 150 ~~v~~lvl~~~~~~ 163 (351)
++++++|.+++...
T Consensus 180 ~~lka~v~~~~~~d 193 (652)
T 2b9v_A 180 PALKVAAPESPMVD 193 (652)
T ss_dssp TTEEEEEEEEECCC
T ss_pred CceEEEEecccccc
Confidence 99999999998754
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=123.96 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=80.5
Q ss_pred cCCeEEEEEEc---C--CCCCeEEEEecCCCCccc--------------hH----HHHHHhcCCCCCCCCchhhhccccc
Q 018750 22 DNGIKIFYRTY---G--RGPTKVILITGLAGTHDA--------------WG----PQLKGLAGTDKPNDDDETILQDSVE 78 (351)
Q Consensus 22 ~~g~~l~y~~~---g--~~~p~vv~~HG~~~~~~~--------------~~----~~~~~l~~~~~~~~~~~~~~~~~~~ 78 (351)
.+|..+..... + ...|+||++||++++... |. .+...|++
T Consensus 95 ~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~----------------- 157 (391)
T 3g8y_A 95 FPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVK----------------- 157 (391)
T ss_dssp STTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHT-----------------
T ss_pred CCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHH-----------------
Confidence 35555554332 2 133689999999887642 12 56677777
Q ss_pred CCCCCCCeEEEEecCCCCCCCCCCCCC---CccchHhH---------------HHHHHHHHHHhC------CcceEEEEE
Q 018750 79 SGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTTKIM---------------AKDVIALMDHLG------WKQAHVFGH 134 (351)
Q Consensus 79 ~~~~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~---------------~~dl~~~l~~~~------~~~v~lvG~ 134 (351)
+||.|+++|+||+|.|...... ..++...+ +.|+.++++.+. .+++.++||
T Consensus 158 -----~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~ 232 (391)
T 3g8y_A 158 -----EGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGF 232 (391)
T ss_dssp -----TTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEE
T ss_pred -----CCCEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEE
Confidence 7999999999999999754210 00223222 256666666652 247999999
Q ss_pred chhhHHHHHHHHhCCcccceEEEeccC
Q 018750 135 SMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 135 S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
||||.+++.+|... ++|+++|+.++.
T Consensus 233 S~GG~~al~~a~~~-~~i~a~v~~~~~ 258 (391)
T 3g8y_A 233 SLGTEPMMVLGVLD-KDIYAFVYNDFL 258 (391)
T ss_dssp GGGHHHHHHHHHHC-TTCCEEEEESCB
T ss_pred ChhHHHHHHHHHcC-CceeEEEEccCC
Confidence 99999999888765 579999988764
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.2e-13 Score=120.71 Aligned_cols=118 Identities=13% Similarity=0.113 Sum_probs=80.4
Q ss_pred ccCCeEEEEEEc---C--CCCCeEEEEecCCCCccc--------------hH----HHHHHhcCCCCCCCCchhhhcccc
Q 018750 21 NDNGIKIFYRTY---G--RGPTKVILITGLAGTHDA--------------WG----PQLKGLAGTDKPNDDDETILQDSV 77 (351)
Q Consensus 21 ~~~g~~l~y~~~---g--~~~p~vv~~HG~~~~~~~--------------~~----~~~~~l~~~~~~~~~~~~~~~~~~ 77 (351)
..+|.++....+ + ...|+||++||.+++... |. .+...|++
T Consensus 99 ~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~---------------- 162 (398)
T 3nuz_A 99 PLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVK---------------- 162 (398)
T ss_dssp CSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHT----------------
T ss_pred cCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHH----------------
Confidence 345666654433 2 133789999999886542 11 46777777
Q ss_pred cCCCCCCCeEEEEecCCCCCCCCCCCCC------------------CccchHhHHHHHHHHHHHhC------CcceEEEE
Q 018750 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKK------------------TEYTTKIMAKDVIALMDHLG------WKQAHVFG 133 (351)
Q Consensus 78 ~~~~~~~g~~vi~~D~~G~G~S~~~~~~------------------~~~~~~~~~~dl~~~l~~~~------~~~v~lvG 133 (351)
+||.|+++|+||+|.|...... ........+.|+.+.++.+. .+++.++|
T Consensus 163 ------~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G 236 (398)
T 3nuz_A 163 ------EGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSG 236 (398)
T ss_dssp ------TTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEE
T ss_pred ------CCCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 7999999999999998643210 00111223466667777663 24799999
Q ss_pred EchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 134 HSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 134 ~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
|||||.+++.++...+ +|+++|..+..
T Consensus 237 ~S~GG~~a~~~aa~~~-~i~a~v~~~~~ 263 (398)
T 3nuz_A 237 FSLGTEPMMVLGTLDT-SIYAFVYNDFL 263 (398)
T ss_dssp EGGGHHHHHHHHHHCT-TCCEEEEESCB
T ss_pred ECHhHHHHHHHHhcCC-cEEEEEEeccc
Confidence 9999999998888754 79998887643
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.8e-16 Score=139.37 Aligned_cols=108 Identities=19% Similarity=0.289 Sum_probs=81.2
Q ss_pred CCCeEEEEecCCCC--------ccchH----HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC
Q 018750 35 GPTKVILITGLAGT--------HDAWG----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (351)
Q Consensus 35 ~~p~vv~~HG~~~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 102 (351)
.+++|||+||++++ ...|. .+.+.|.+ +||+|+++|+||+|.|...
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~----------------------~Gy~Via~Dl~G~G~S~~~ 108 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRK----------------------AGYETYEASVSALASNHER 108 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHH----------------------TTCCEEEECCCSSSCHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHh----------------------CCCEEEEEcCCCCCCCccc
Confidence 44579999999874 34574 58888876 5999999999999988521
Q ss_pred CC-----------------CCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHh-----------------
Q 018750 103 VK-----------------KTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAM----------------- 147 (351)
Q Consensus 103 ~~-----------------~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~----------------- 147 (351)
.. ...++++++++++.++++.++. ++++||||||||.++..+|..
T Consensus 109 ~~~l~~~i~~g~g~sg~~~~~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg 188 (431)
T 2hih_A 109 AVELYYYLKGGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGG 188 (431)
T ss_dssp HHHHHHHHHCEEEECCHHHHHHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCS
T ss_pred hHHhhhhhhhccccccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhcccccc
Confidence 10 0123344455566666777663 799999999999999998876
Q ss_pred ---------CCcccceEEEeccCCCC
Q 018750 148 ---------VPERVLSLALLNVTGGG 164 (351)
Q Consensus 148 ---------~p~~v~~lvl~~~~~~~ 164 (351)
+|++|.++|+++++..+
T Consensus 189 ~i~~l~~g~~p~~V~slv~i~tP~~G 214 (431)
T 2hih_A 189 IISELFKGGQDNMVTSITTIATPHNG 214 (431)
T ss_dssp CCCHHHHCCCCSCEEEEEEESCCTTC
T ss_pred ccccccccCcccceeEEEEECCCCCC
Confidence 68899999999986533
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-12 Score=121.98 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=87.0
Q ss_pred ccccCCeEEEEEEcCC----CCCeEEEEecCCCCcc-chH----------------------HHHHHhcCCCCCCCCchh
Q 018750 19 ALNDNGIKIFYRTYGR----GPTKVILITGLAGTHD-AWG----------------------PQLKGLAGTDKPNDDDET 71 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~-~~~----------------------~~~~~l~~~~~~~~~~~~ 71 (351)
+...||.+|+...+-+ .-|+||+.||++.... .+. .....|++
T Consensus 46 i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~---------- 115 (560)
T 3iii_A 46 VEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVP---------- 115 (560)
T ss_dssp EECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGG----------
T ss_pred EECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHh----------
Confidence 4445899888765532 2378999999988742 111 11344554
Q ss_pred hhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC-----cceEEEEEchhhHHHHHHHH
Q 018750 72 ILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAA 146 (351)
Q Consensus 72 ~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-----~~v~lvG~S~Gg~~a~~~a~ 146 (351)
+||.|+++|.||+|.|..... .+ .....+|+.++++.+.. .++.++|+||||.+++.+|.
T Consensus 116 ------------~Gy~vv~~D~RG~G~S~G~~~--~~-~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~ 180 (560)
T 3iii_A 116 ------------NDYVVVKVALRGSDKSKGVLS--PW-SKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVAS 180 (560)
T ss_dssp ------------GTCEEEEEECTTSTTCCSCBC--TT-SHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHT
T ss_pred ------------CCCEEEEEcCCCCCCCCCccc--cC-ChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHh
Confidence 899999999999999986542 11 13566777777766521 47999999999999999999
Q ss_pred hCCcccceEEEeccCC
Q 018750 147 MVPERVLSLALLNVTG 162 (351)
Q Consensus 147 ~~p~~v~~lvl~~~~~ 162 (351)
..|+.++++|..++..
T Consensus 181 ~~p~~l~aiv~~~~~~ 196 (560)
T 3iii_A 181 LNPPHLKAMIPWEGLN 196 (560)
T ss_dssp TCCTTEEEEEEESCCC
T ss_pred cCCCceEEEEecCCcc
Confidence 9999999999998763
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=5.6e-13 Score=120.20 Aligned_cols=62 Identities=13% Similarity=0.004 Sum_probs=46.8
Q ss_pred ccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCC-Cccccc-cChHHHHHHHHHHHHh
Q 018750 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSH-ERTEEVNQALIDLIKA 320 (351)
Q Consensus 259 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~-~~p~~~~~~i~~fl~~ 320 (351)
++++|++++||.+|.++|.+.++++.+.+. .+++++.+++ +|.... ..-.+..+.+.+-++.
T Consensus 342 ~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~~~~d~l~WL~~r~~G 408 (462)
T 3guu_A 342 VPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIFGLVPSLWFIKQAFDG 408 (462)
T ss_dssp CCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHTHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhhhHHHHHHHHHHHhCC
Confidence 567999999999999999999999888762 3678899998 997754 3444455555554443
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.6e-13 Score=119.92 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=73.1
Q ss_pred CCCeEEEEecCCCCcc-------chHH----HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 35 GPTKVILITGLAGTHD-------AWGP----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~-------~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
.+++|||+||++++.. .|.. +.+.|.+ +||+|+++|+||+|.|..
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~----------------------~G~~Via~Dl~g~G~s~~-- 60 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLND----------------------NGYRTYTLAVGPLSSNWD-- 60 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHH----------------------TTCCEEEECCCSSBCHHH--
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHH----------------------CCCEEEEecCCCCCCccc--
Confidence 3456999999988642 4763 4488876 699999999999997732
Q ss_pred CCCccchHhHHHHHH------------------------HHHHH-hCCcceEEEEEchhhHHHHHHHHh-----------
Q 018750 104 KKTEYTTKIMAKDVI------------------------ALMDH-LGWKQAHVFGHSMGAMIACKLAAM----------- 147 (351)
Q Consensus 104 ~~~~~~~~~~~~dl~------------------------~~l~~-~~~~~v~lvG~S~Gg~~a~~~a~~----------- 147 (351)
...++.+.+. ++++. .+.++++||||||||.++..++..
T Consensus 61 -----~a~~l~~~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~ 135 (387)
T 2dsn_A 61 -----RACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREY 135 (387)
T ss_dssp -----HHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHH
T ss_pred -----cHHHHHHHHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhcccccccccc
Confidence 1122222222 12223 466899999999999999999973
Q ss_pred --------CC------cccceEEEeccCCCCC
Q 018750 148 --------VP------ERVLSLALLNVTGGGF 165 (351)
Q Consensus 148 --------~p------~~v~~lvl~~~~~~~~ 165 (351)
+| ++|.++|+++++..+.
T Consensus 136 ~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~Gs 167 (387)
T 2dsn_A 136 AKAHNVSLSPLFEGGHHFVLSVTTIATPHDGT 167 (387)
T ss_dssp HHHHTCCCCGGGTCCCCCEEEEEEESCCTTCC
T ss_pred ccccccccCccccccccceeEEEEECCCCCCc
Confidence 35 7899999999876543
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.4e-11 Score=102.04 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=72.4
Q ss_pred CCeEEEEecCCCCccch-------HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc
Q 018750 36 PTKVILITGLAGTHDAW-------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (351)
-|+||++||.+++...| ..+++.|...++- .++.|+++|.+| .+... ..+
T Consensus 69 ~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~------------------~~~ivv~pd~~~--~~~~~---~~~ 125 (297)
T 1gkl_A 69 YNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGEL------------------EPLIVVTPTFNG--GNCTA---QNF 125 (297)
T ss_dssp CEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSS------------------CCEEEEECCSCS--TTCCT---TTH
T ss_pred CCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCC------------------CCEEEEEecCcC--Cccch---HHH
Confidence 36788899998766544 3456666541100 259999999875 22211 122
Q ss_pred chHhHHHHHHHHHHHh-C--------------CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 109 TTKIMAKDVIALMDHL-G--------------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~-~--------------~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
.+.+++++..+++.. . .+++.|+|+||||.+++.++.++|+++++++++++.
T Consensus 126 -~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 126 -YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp -HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred -HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccc
Confidence 345567777777754 2 246899999999999999999999999999999986
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.8e-11 Score=106.67 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=68.9
Q ss_pred CCCeEEEEecCCCCc-cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe----EEEEecCCCCC-CCCCCCCCCcc
Q 018750 35 GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI----EVCAFDNRGMG-RSSVPVKKTEY 108 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~----~vi~~D~~G~G-~S~~~~~~~~~ 108 (351)
..|+|+++||.+... ..+..++..|.. +|+ .|+++|.+|++ ++.... ...
T Consensus 196 ~~PvlvllHG~~~~~~~~~~~~~~~l~~----------------------~g~~~p~iVV~~d~~~~~~r~~~~~--~~~ 251 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVWPVLTSLTH----------------------RQQLPPAVYVLIDAIDTTHRAHELP--CNA 251 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCHHHHHHHHH----------------------TTSSCSCEEEEECCCSHHHHHHHSS--SCH
T ss_pred CCCEEEEeCCHHHhhcCcHHHHHHHHHH----------------------cCCCCCeEEEEECCCCCccccccCC--ChH
Confidence 347899999954211 123345666665 354 59999998632 221111 011
Q ss_pred ch-HhHHHHHHHHHHHh-C----CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 109 TT-KIMAKDVIALMDHL-G----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 109 ~~-~~~~~dl~~~l~~~-~----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
.. +.+++++...++.. . .++++|+|+||||.+++.++.++|+++.+++++++.
T Consensus 252 ~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~ 310 (403)
T 3c8d_A 252 DFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGS 310 (403)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccc
Confidence 22 33345666666653 2 258999999999999999999999999999999876
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.8e-10 Score=96.94 Aligned_cols=47 Identities=11% Similarity=0.268 Sum_probs=38.6
Q ss_pred HHHHHHHHH-hCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 115 KDVIALMDH-LGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 115 ~dl~~~l~~-~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+++..+++. ++. +++.++||||||.+++.++.++|+.+++++++++.
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~ 186 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCce
Confidence 455555554 333 57999999999999999999999999999999875
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.02 E-value=8e-08 Score=86.80 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=80.5
Q ss_pred ccccC-CeEEEEEEcCC-----CCCeEEEEecCCCCccchHHHHH-----------HhcCCCCCCCCchhhhcccccCCC
Q 018750 19 ALNDN-GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLK-----------GLAGTDKPNDDDETILQDSVESGD 81 (351)
Q Consensus 19 ~~~~~-g~~l~y~~~g~-----~~p~vv~~HG~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~ 81 (351)
+++++ +..++|+-... .+|+||++||.+|.+..+..+.+ .|..+-.+++
T Consensus 25 yv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~-------------- 90 (452)
T 1ivy_A 25 YLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN-------------- 90 (452)
T ss_dssp EEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGG--------------
T ss_pred EEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCccc--------------
Confidence 44444 57787765542 45789999999998877633321 0111111111
Q ss_pred CCCCeEEEEecC-CCCCCCCCCCCCCccchHhHHHHH----HHHHHH---hCCcceEEEEEchhhHHHHHHHHh----CC
Q 018750 82 GGAGIEVCAFDN-RGMGRSSVPVKKTEYTTKIMAKDV----IALMDH---LGWKQAHVFGHSMGAMIACKLAAM----VP 149 (351)
Q Consensus 82 ~~~g~~vi~~D~-~G~G~S~~~~~~~~~~~~~~~~dl----~~~l~~---~~~~~v~lvG~S~Gg~~a~~~a~~----~p 149 (351)
+..+++.+|. .|.|.|.........+.+..++|+ ..+++. +...+++|+|+|+||..+..+|.. .+
T Consensus 91 --~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~ 168 (452)
T 1ivy_A 91 --LIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPS 168 (452)
T ss_dssp --GSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTT
T ss_pred --ccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCc
Confidence 3678999996 799999743321222333444444 444443 344789999999999966666654 35
Q ss_pred cccceEEEeccCC
Q 018750 150 ERVLSLALLNVTG 162 (351)
Q Consensus 150 ~~v~~lvl~~~~~ 162 (351)
-.++++++.++..
T Consensus 169 ~~l~g~~ign~~~ 181 (452)
T 1ivy_A 169 MNLQGLAVGNGLS 181 (452)
T ss_dssp SCEEEEEEESCCS
T ss_pred cccceEEecCCcc
Confidence 6799999999863
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.2e-07 Score=81.64 Aligned_cols=60 Identities=15% Similarity=0.091 Sum_probs=46.5
Q ss_pred ccEEEEeecCCccCCHHHHHHHHHHhCC-----CceEEEcCC-CccccccCh-------------------HHHHHHHHH
Q 018750 262 FLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERT-------------------EEVNQALID 316 (351)
Q Consensus 262 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~g-gH~~~~~~p-------------------~~~~~~i~~ 316 (351)
.|++++||++|.+||++.++++.+.+.. +.+++.+++ ||....+.. -.-...|.+
T Consensus 91 ~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~~~~i~~ 170 (318)
T 2d81_A 91 RKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALK 170 (318)
T ss_dssp CEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCHHHHHHH
T ss_pred CcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCChHHHHHHH
Confidence 5999999999999999999999987732 468888998 997654433 234567888
Q ss_pred HHHhc
Q 018750 317 LIKAS 321 (351)
Q Consensus 317 fl~~~ 321 (351)
|+...
T Consensus 171 ff~g~ 175 (318)
T 2d81_A 171 WIYGS 175 (318)
T ss_dssp HHHSS
T ss_pred HHhcc
Confidence 88654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.76 E-value=3.3e-08 Score=101.73 Aligned_cols=204 Identities=16% Similarity=0.083 Sum_probs=116.9
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.++++|+|+.++....|..+...|. .+.|++++.+ +.+++++
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~------------------------~~~v~~l~~~--------------~~~~~~~ 1099 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP------------------------SYKLCAFDFI--------------EEEDRLD 1099 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC------------------------SCEEEECBCC--------------CSTTHHH
T ss_pred CCcceeecccccchHHHHHHHhccc------------------------ccceEeeccc--------------CHHHHHH
Confidence 3469999999998888877666553 4788888763 2344555
Q ss_pred HHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH
Q 018750 116 DVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (351)
Q Consensus 116 dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
.+.+.+..+.. .++.++|||+||.+|.++|.+.. ..+..++++++....... ..........
T Consensus 1100 ~~~~~i~~~~~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~--~~~~~~~~~~------------ 1165 (1304)
T 2vsq_A 1100 RYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVS--DLDGRTVESD------------ 1165 (1304)
T ss_dssp HHHHHHHHHCCSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-------CHHHH------------
T ss_pred HHHHHHHHhCCCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCccccccc--ccccccchhh------------
Confidence 56666666653 58999999999999999987643 458899999875321100 0000000000
Q ss_pred hhcCccccccHHHHHHhhc------CCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 192 AAVDLDTHYSQEYLEEYVG------SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
.+.+..... ...........+...+. .. ... ..-..+++|++
T Consensus 1166 ----------~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~---------------~~------~~~-~~~~~~~~pv~ 1213 (1304)
T 2vsq_A 1166 ----------VEALMNVNRDNEALNSEAVKHGLKQKTHAFYS---------------YY------VNL-ISTGQVKADID 1213 (1304)
T ss_dssp ----------HHHHHTTCC-------CTTTGGGHHHHHHHHH---------------HH------HC------CBSSEEE
T ss_pred ----------HHHHHHhhhhhhhhcchhcchHHHHHHHHHHH---------------HH------HHH-hccCCcCCCEE
Confidence 000000000 00000000111000000 00 000 00156789999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccCh--HHHHHHHHHHHHhcCCC
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT--EEVNQALIDLIKASEKK 324 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p--~~~~~~i~~fl~~~~~~ 324 (351)
++.|+.|.. +.+....|.+......+++.++|+|+.+++.+ +++++.|.++|.+....
T Consensus 1214 l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~G~H~~ml~~~~~~~~a~~l~~~L~~~~~~ 1273 (1304)
T 2vsq_A 1214 LLTSGADFD-IPEWLASWEEATTGVYRMKRGFGTHAEMLQGETLDRNAEILLEFLNTQTVT 1273 (1304)
T ss_dssp EEECSSCCC-CCSSEECSSTTBSSCCCEEECSSCTTGGGSHHHHHHHHHHHHHHHHCCCCC
T ss_pred EEEecCccc-cccchhhHHHHhCCCeEEEEeCCCHHHHCCCHHHHHHHHHHHHHHhccchh
Confidence 999998873 22222334443335678999999998888754 58999999999876543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.7e-06 Score=78.95 Aligned_cols=122 Identities=13% Similarity=0.108 Sum_probs=79.5
Q ss_pred CeEEEEEEcC-------CCCCeEEEEecCCCCccchHHHHHHhcC-----------CCCCCCCchhhhcccccCCCCCCC
Q 018750 24 GIKIFYRTYG-------RGPTKVILITGLAGTHDAWGPQLKGLAG-----------TDKPNDDDETILQDSVESGDGGAG 85 (351)
Q Consensus 24 g~~l~y~~~g-------~~~p~vv~~HG~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~g 85 (351)
+..+.|+-.. ..+|++|+++|.+|++..+..+. ++.. +-.+++ +.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~-e~GP~~~~~~~~l~~n~~sw~----------------~~ 110 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALV-ESGPFRVNSDGKLYLNEGSWI----------------SK 110 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHH-SSSSEEECTTSCEEECTTCGG----------------GT
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHh-hcCCeEecCCCceeecccchh----------------hc
Confidence 5677665332 24688999999999888764333 1111 011111 25
Q ss_pred eEEEEecC-CCCCCCCCCCCC--------CccchHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHhC-
Q 018750 86 IEVCAFDN-RGMGRSSVPVKK--------TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV- 148 (351)
Q Consensus 86 ~~vi~~D~-~G~G~S~~~~~~--------~~~~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~- 148 (351)
.+++.+|. .|.|.|...... ...+.++.++++..++... ...+++|.|+|+||..+..+|...
T Consensus 111 ~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~ 190 (483)
T 1ac5_A 111 GDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAIL 190 (483)
T ss_dssp SEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHH
Confidence 78999996 699999754321 1225667788877777653 346899999999999888777531
Q ss_pred -----------CcccceEEEeccCC
Q 018750 149 -----------PERVLSLALLNVTG 162 (351)
Q Consensus 149 -----------p~~v~~lvl~~~~~ 162 (351)
+-.++++++-++..
T Consensus 191 ~~n~~~~~~~~~inLkGi~IGNg~~ 215 (483)
T 1ac5_A 191 NHNKFSKIDGDTYDLKALLIGNGWI 215 (483)
T ss_dssp HHHHHCCSTTSCCEEEEEEEEEECC
T ss_pred HhcccccccCcccceeeeEecCCcc
Confidence 12477888777653
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-07 Score=79.30 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=31.3
Q ss_pred cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 127 KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 127 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+++.|+||||||.+++.++.+ |+.+++++++++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 368999999999999999999 9999999999874
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.64 E-value=3e-07 Score=80.01 Aligned_cols=132 Identities=13% Similarity=0.052 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHh-CC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHH
Q 018750 113 MAKDVIALMDHL-GW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (351)
Q Consensus 113 ~~~dl~~~l~~~-~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
+.+++...++.. .. ....++||||||..++.++.++|+.+.+++.++|... +..
T Consensus 121 l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w-------~~~----------------- 176 (331)
T 3gff_A 121 IEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLW-------FDS----------------- 176 (331)
T ss_dssp HHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTT-------TTT-----------------
T ss_pred HHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhc-------CCh-----------------
Confidence 334555555543 22 2347899999999999999999999999999997620 000
Q ss_pred HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeec
Q 018750 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (351)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 270 (351)
...+ +.... ........+.|+++.+|+
T Consensus 177 -----------~~~~--------------~~~~~----------------------------~~~~~~~~~~~l~l~~G~ 203 (331)
T 3gff_A 177 -----------PHYL--------------TLLEE----------------------------RVVKGDFKQKQLFMAIAN 203 (331)
T ss_dssp -----------THHH--------------HHHHH----------------------------HHHHCCCSSEEEEEEECC
T ss_pred -----------HHHH--------------HHHHH----------------------------HhhcccCCCCeEEEEeCC
Confidence 0000 00000 000111234799999999
Q ss_pred CCc-------cCCHHHHHHHHHHhC----C--CceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 271 HDV-------IAQICYARRLAEKLY----P--VARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 271 ~D~-------~~~~~~~~~~~~~~~----~--~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
.|. .++.+..+++.+.+. + +.++.++++ +|.... +..+.+.+..++.....
T Consensus 204 ~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~~~ 268 (331)
T 3gff_A 204 NPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDFAI 268 (331)
T ss_dssp CSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGGCC
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhcCC
Confidence 998 355556666665552 1 467788998 897654 66777778777776654
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.59 E-value=6e-06 Score=71.47 Aligned_cols=52 Identities=19% Similarity=0.063 Sum_probs=38.8
Q ss_pred hHhHHHHHHHHHHHh------CC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 110 TKIMAKDVIALMDHL------GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~------~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+..++-++..+++.+ .+ ++|.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 160 l~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 160 MTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 334444555555544 23 57999999999999999999875 899999988654
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=3.6e-06 Score=73.73 Aligned_cols=35 Identities=23% Similarity=0.083 Sum_probs=31.1
Q ss_pred cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 127 KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 127 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
++|.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 219 ~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 219 KRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred hHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 58999999999999999999875 899999988654
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.9e-07 Score=85.99 Aligned_cols=118 Identities=16% Similarity=0.146 Sum_probs=78.3
Q ss_pred CCeEEEEEEcC---CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCC-eEEEEecCC-
Q 018750 23 NGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNR- 94 (351)
Q Consensus 23 ~g~~l~y~~~g---~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~- 94 (351)
|+..+..+.-. ...|+||++||.+ ++...+......|++ +| +.|+.+|+|
T Consensus 83 dcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~----------------------~~~~vvv~~nYRl 140 (498)
T 2ogt_A 83 DGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAK----------------------HGDVVVVTINYRM 140 (498)
T ss_dssp CCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHH----------------------HHTCEEEEECCCC
T ss_pred CCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHh----------------------CCCEEEEeCCCcC
Confidence 45566655432 2347899999987 554443333455654 35 999999999
Q ss_pred ---CCCCCCCCCC-----CCccchHhHHHHHHHHHHHh---C--CcceEEEEEchhhHHHHHHHHhC--CcccceEEEec
Q 018750 95 ---GMGRSSVPVK-----KTEYTTKIMAKDVIALMDHL---G--WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLN 159 (351)
Q Consensus 95 ---G~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~~---~--~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~ 159 (351)
|++.+..... ...+.+.|....+..+.+.+ | .++|.|+|+|.||.+++.++... ...++++|+.+
T Consensus 141 g~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~s 220 (498)
T 2ogt_A 141 NVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQS 220 (498)
T ss_dssp HHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEES
T ss_pred chhhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeecc
Confidence 8887764321 11234555555555554443 3 35799999999999998887753 34699999999
Q ss_pred cCC
Q 018750 160 VTG 162 (351)
Q Consensus 160 ~~~ 162 (351)
+..
T Consensus 221 g~~ 223 (498)
T 2ogt_A 221 GSG 223 (498)
T ss_dssp CCT
T ss_pred CCc
Confidence 864
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.4e-05 Score=69.84 Aligned_cols=121 Identities=17% Similarity=0.137 Sum_probs=78.0
Q ss_pred CeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHHH----------hcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKG----------LAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 24 g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
+..+.|+-.. ..+|++|+++|.+|.+..+..+.+. +..+-.+++ +-.++
T Consensus 27 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~----------------~~an~ 90 (421)
T 1cpy_A 27 DKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWN----------------SNATV 90 (421)
T ss_dssp TEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGG----------------GGSEE
T ss_pred CcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccc----------------cccCE
Confidence 6778775433 2468899999999988765332210 111001111 25689
Q ss_pred EEecC-CCCCCCCCCCCCCccchHhHHHHHHHHHHHh-------CC--cceEEEEEchhhHHHHHHHHhCC------ccc
Q 018750 89 CAFDN-RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-------GW--KQAHVFGHSMGAMIACKLAAMVP------ERV 152 (351)
Q Consensus 89 i~~D~-~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-------~~--~~v~lvG~S~Gg~~a~~~a~~~p------~~v 152 (351)
+.+|. .|.|.|..... ...+.++.++|+.++++.. .. .+++|.|.|+||..+-.+|...- -.+
T Consensus 91 lfiDqPvGtGfSy~~~~-~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inL 169 (421)
T 1cpy_A 91 IFLDQPVNVGFSYSGSS-GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNL 169 (421)
T ss_dssp ECCCCSTTSTTCEESSC-CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCC
T ss_pred EEecCCCcccccCCCCC-CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccce
Confidence 99994 59999865443 1334566677777666543 33 58999999999999888776531 247
Q ss_pred ceEEEeccC
Q 018750 153 LSLALLNVT 161 (351)
Q Consensus 153 ~~lvl~~~~ 161 (351)
+++++-++.
T Consensus 170 kGi~IGNg~ 178 (421)
T 1cpy_A 170 TSVLIGNGL 178 (421)
T ss_dssp CEEEEESCC
T ss_pred eeEEecCcc
Confidence 888777664
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.48 E-value=2e-07 Score=85.69 Aligned_cols=118 Identities=19% Similarity=0.115 Sum_probs=73.7
Q ss_pred CCeEEEEEEcC---CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCC-eEEEEecCC-
Q 018750 23 NGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNR- 94 (351)
Q Consensus 23 ~g~~l~y~~~g---~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~- 94 (351)
|...+..+.-. ...|+||++||.+ ++...+......|+. +| +.|+.+|+|
T Consensus 81 dcL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~----------------------~g~~vvv~~nYRl 138 (489)
T 1qe3_A 81 DCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAA----------------------QGEVIVVTLNYRL 138 (489)
T ss_dssp CCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHH----------------------HHTCEEEEECCCC
T ss_pred CCCEEEEEeCCCCCCCCCEEEEECCCccccCCCCCcccCHHHHHh----------------------cCCEEEEecCccC
Confidence 44455544322 1247899999965 444333333455554 34 999999999
Q ss_pred ---CCCCCCCCC--CCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCC
Q 018750 95 ---GMGRSSVPV--KKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (351)
Q Consensus 95 ---G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 162 (351)
|++.+.... ....+.+.|....+..+.+. .+. ++|.|+|+|+||.++..++... ++.++++|+.++..
T Consensus 139 g~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 139 GPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred cccccCccccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 666654321 11233455555444444333 333 4799999999999988877653 46799999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=4e-08 Score=105.71 Aligned_cols=93 Identities=16% Similarity=0.213 Sum_probs=0.0
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.++++|+|+.+++...|..+...|. ..|+.+..+| .. ...+++++++
T Consensus 2242 ~~~Lfc~~~agG~~~~y~~l~~~l~-------------------------~~v~~lq~pg----~~----~~~~i~~la~ 2288 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSITVFHGLAAKLS-------------------------IPTYGLQCTG----AA----PLDSIQSLAS 2288 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHHHHHHHHHhhC-------------------------CcEEEEecCC----CC----CCCCHHHHHH
Confidence 4569999999999888877776552 5778888877 11 2336788888
Q ss_pred HHHHHHHHhC-CcceEEEEEchhhHHHHHHHHhCC---cccc---eEEEeccC
Q 018750 116 DVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVP---ERVL---SLALLNVT 161 (351)
Q Consensus 116 dl~~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~---~lvl~~~~ 161 (351)
++.+.+.... ..++.++||||||.+|.++|.+.. ..+. .++++++.
T Consensus 2289 ~~~~~i~~~~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2289 YYIECIRQVQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 8777776664 368999999999999999987653 2344 67777764
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=3.5e-06 Score=69.50 Aligned_cols=123 Identities=18% Similarity=0.205 Sum_probs=83.8
Q ss_pred CCeEEEEEEcC-----CCCCeEEEEecCCCCccch-HHHHH-----------HhcCCCCCCCCchhhhcccccCCCCCCC
Q 018750 23 NGIKIFYRTYG-----RGPTKVILITGLAGTHDAW-GPQLK-----------GLAGTDKPNDDDETILQDSVESGDGGAG 85 (351)
Q Consensus 23 ~g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~-~~~~~-----------~l~~~~~~~~~~~~~~~~~~~~~~~~~g 85 (351)
.+..+.|+-.. ..+|+||+++|.+|++..+ ..+.+ .|..+-.+++ +-
T Consensus 30 ~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~----------------~~ 93 (255)
T 1whs_A 30 AGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWN----------------KV 93 (255)
T ss_dssp TTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGG----------------GT
T ss_pred CCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccc----------------cc
Confidence 46788876443 2468899999999988876 44331 1211112222 25
Q ss_pred eEEEEecC-CCCCCCCCCCCCC--ccchHhHHHHHHHHHHH-------hCCcceEEEEEchhhHHHHHHHHhC------C
Q 018750 86 IEVCAFDN-RGMGRSSVPVKKT--EYTTKIMAKDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAMV------P 149 (351)
Q Consensus 86 ~~vi~~D~-~G~G~S~~~~~~~--~~~~~~~~~dl~~~l~~-------~~~~~v~lvG~S~Gg~~a~~~a~~~------p 149 (351)
.+++.+|. .|.|.|....... ..+.++.++|+.++++. +...+++|.|+|+||..+..+|... .
T Consensus 94 anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 173 (255)
T 1whs_A 94 ANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPV 173 (255)
T ss_dssp SEEEEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSS
T ss_pred CCEEEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcc
Confidence 78999996 5999996544211 24667778888777764 3446899999999999988877642 1
Q ss_pred cccceEEEeccC
Q 018750 150 ERVLSLALLNVT 161 (351)
Q Consensus 150 ~~v~~lvl~~~~ 161 (351)
-.++++++.++.
T Consensus 174 inLkGi~ign~~ 185 (255)
T 1whs_A 174 INLKGFMVGNGL 185 (255)
T ss_dssp CEEEEEEEEEEC
T ss_pred cccceEEecCCc
Confidence 358899999875
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.6e-05 Score=68.02 Aligned_cols=50 Identities=18% Similarity=0.078 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHh-C---------CcceEEEEEchhhHHHHHHHHhC--CcccceEEEeccC
Q 018750 112 IMAKDVIALMDHL-G---------WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVT 161 (351)
Q Consensus 112 ~~~~dl~~~l~~~-~---------~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~ 161 (351)
-+++++..+++.. . .++..|.||||||.-|+.+|.++ |.+..++...++.
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~ 189 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccc
Confidence 3556777777642 2 23579999999999999999986 5567777766654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.8e-06 Score=80.54 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=54.4
Q ss_pred CCeEEEEecCCC----CCCCCCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHh--CCccc
Q 018750 84 AGIEVCAFDNRG----MGRSSVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAM--VPERV 152 (351)
Q Consensus 84 ~g~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v 152 (351)
+|+.|+.+|+|. +..+..........+.|....+..+.+. .|. ++|.|+|+|.||.++..++.. .+..+
T Consensus 144 ~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf 223 (551)
T 2fj0_A 144 KDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLF 223 (551)
T ss_dssp GSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSC
T ss_pred CCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhh
Confidence 699999999993 3333221111344566666655544444 343 579999999999999888765 34679
Q ss_pred ceEEEeccCC
Q 018750 153 LSLALLNVTG 162 (351)
Q Consensus 153 ~~lvl~~~~~ 162 (351)
+++|+.++..
T Consensus 224 ~~~i~~sg~~ 233 (551)
T 2fj0_A 224 RRAILMSGTS 233 (551)
T ss_dssp SEEEEESCCT
T ss_pred hheeeecCCc
Confidence 9999999864
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=6.4e-06 Score=76.65 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=74.4
Q ss_pred cCCeEEEEEEcC-----CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 22 DNGIKIFYRTYG-----RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 22 ~~g~~l~y~~~g-----~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
-|...+..+.-. ...|+||++||.+ ++...|... .|+.. .|+-|+.+|+
T Consensus 96 edcl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~---------------------~g~vvv~~nY 152 (542)
T 2h7c_A 96 EDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAH---------------------ENVVVVTIQY 152 (542)
T ss_dssp SCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHH---------------------HTCEEEEECC
T ss_pred CCCcEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCHH--HHHhc---------------------CCEEEEecCC
Confidence 355566655432 2347899999964 333333322 23210 3899999999
Q ss_pred C----CCCCCCCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHh--CCcccceEEEeccCC
Q 018750 94 R----GMGRSSVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (351)
Q Consensus 94 ~----G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 162 (351)
| |++.+........+.+.|....+..+.+. .|. ++|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 153 Rlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 153 RLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp CCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CCccccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 9 56554332222344455555555444443 343 479999999999999988876 356799999999864
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.14 E-value=9.8e-06 Score=75.41 Aligned_cols=120 Identities=15% Similarity=0.026 Sum_probs=73.5
Q ss_pred cCCeEEEEEEcCC----CCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 22 DNGIKIFYRTYGR----GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 22 ~~g~~l~y~~~g~----~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
-|...+..+.-.. ..|+||++||.+ ++..........|+.. .|+.|+.+++|
T Consensus 94 edcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~---------------------~g~vvv~~nYR 152 (543)
T 2ha2_A 94 EDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQV---------------------EGAVLVSMNYR 152 (543)
T ss_dssp SCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHH---------------------HCCEEEEECCC
T ss_pred CcCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHHhc---------------------CCEEEEEeccc
Confidence 3555666554321 237899999976 3332211222344320 38999999999
Q ss_pred ----CCCCCC-CCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCC
Q 018750 95 ----GMGRSS-VPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (351)
Q Consensus 95 ----G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 162 (351)
|++.+. .+.....+.+.|....+..+.+. +|. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 153 lg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 153 VGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred ccccccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 455442 11111344456665555544444 343 5799999999999988776543 45799999999864
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.09 E-value=9.1e-06 Score=75.49 Aligned_cols=119 Identities=14% Similarity=0.055 Sum_probs=74.8
Q ss_pred cCCeEEEEEEcC---CCCCeEEEEecCC---CCccchHHHHHHhc-CCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 22 DNGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 22 ~~g~~l~y~~~g---~~~p~vv~~HG~~---~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
-|...+..+.-. .+.|+||++||.+ ++..........|+ + .|+-|+.+++|
T Consensus 92 edcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~----------------------~~~vvv~~nYR 149 (537)
T 1ea5_A 92 EDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYT----------------------EEVVLVSLSYR 149 (537)
T ss_dssp SCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHH----------------------HTCEEEECCCC
T ss_pred CcCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHHhc----------------------CCEEEEEeccC
Confidence 355566655432 2347899999965 33322112234454 3 48999999999
Q ss_pred ----CCCCC-CCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCC
Q 018750 95 ----GMGRS-SVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (351)
Q Consensus 95 ----G~G~S-~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 162 (351)
|+..+ ..+.....+.+.|....+.-+.+. +|. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 150 lg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 150 VGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp CHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred ccccccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 45444 111111344566666555555444 343 5799999999999988877642 35799999999864
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.08 E-value=8e-06 Score=75.79 Aligned_cols=120 Identities=18% Similarity=0.071 Sum_probs=74.3
Q ss_pred cCCeEEEEEEcC---CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC-
Q 018750 22 DNGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR- 94 (351)
Q Consensus 22 ~~g~~l~y~~~g---~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~- 94 (351)
-|...+..+.-. .+.|+||++||.+ ++..........|+.. .|+-|+.+++|
T Consensus 90 edcl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~---------------------~~~vvv~~nYRl 148 (529)
T 1p0i_A 90 EDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARV---------------------ERVIVVSMNYRV 148 (529)
T ss_dssp SCCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHH---------------------HCCEEEEECCCC
T ss_pred CcCCeEEEeeCCCCCCCCeEEEEECCCccccCCCCccccChHHHhcc---------------------CCeEEEEecccc
Confidence 345566554432 2347899999965 3332211122344320 38999999999
Q ss_pred ---CCCCC-CCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCC
Q 018750 95 ---GMGRS-SVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (351)
Q Consensus 95 ---G~G~S-~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 162 (351)
|++.+ ..+.....+.+.|....+..+.+. .|. ++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 149 g~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 149 GALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cccccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 55544 211111344456665555544444 343 4799999999999998887653 35799999999864
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00014 Score=66.39 Aligned_cols=79 Identities=22% Similarity=0.148 Sum_probs=65.0
Q ss_pred CeEEEEecCCCCCCCCCCC-------CCCccchHhHHHHHHHHHHHhC------CcceEEEEEchhhHHHHHHHHhCCcc
Q 018750 85 GIEVCAFDNRGMGRSSVPV-------KKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPER 151 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~dl~~~l~~~~------~~~v~lvG~S~Gg~~a~~~a~~~p~~ 151 (351)
|--++.+++|-+|.|.+.. .....|.++..+|+..+++.+. ..|++++|.|+||++|.-+-.++|+.
T Consensus 73 ~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l 152 (472)
T 4ebb_A 73 GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 152 (472)
T ss_dssp TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT
T ss_pred CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe
Confidence 5689999999999997532 1234688899999999888762 24799999999999999999999999
Q ss_pred cceEEEeccCCC
Q 018750 152 VLSLALLNVTGG 163 (351)
Q Consensus 152 v~~lvl~~~~~~ 163 (351)
|.+.+.-+++..
T Consensus 153 v~ga~ASSApv~ 164 (472)
T 4ebb_A 153 VAGALAASAPVL 164 (472)
T ss_dssp CSEEEEETCCTT
T ss_pred EEEEEecccceE
Confidence 999998877643
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.87 E-value=3.7e-05 Score=71.17 Aligned_cols=79 Identities=14% Similarity=-0.006 Sum_probs=52.0
Q ss_pred CCeEEEEecCC----CCCCCCCCC--CCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC----
Q 018750 84 AGIEVCAFDNR----GMGRSSVPV--KKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV---- 148 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~---- 148 (351)
.|+.|+.+|+| |++.+.... ......+.|....+..+.+. +|. ++|.|+|+|.||..+...+...
T Consensus 132 ~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~ 211 (522)
T 1ukc_A 132 DVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKD 211 (522)
T ss_dssp SCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCC
T ss_pred CcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccc
Confidence 49999999999 555543210 01233455555555444443 343 4799999999998776665443
Q ss_pred CcccceEEEeccCC
Q 018750 149 PERVLSLALLNVTG 162 (351)
Q Consensus 149 p~~v~~lvl~~~~~ 162 (351)
+..+.++|+.++..
T Consensus 212 ~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 212 EGLFIGAIVESSFW 225 (522)
T ss_dssp CSSCSEEEEESCCC
T ss_pred cccchhhhhcCCCc
Confidence 45789999998864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00049 Score=58.05 Aligned_cols=132 Identities=16% Similarity=0.085 Sum_probs=82.6
Q ss_pred CCeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccC--CCCCCCeEEEEecCC-
Q 018750 23 NGIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES--GDGGAGIEVCAFDNR- 94 (351)
Q Consensus 23 ~g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~g~~vi~~D~~- 94 (351)
++..+.|+-.. ..+|+||.+.|.+|.+..+..+.+ +..- ..+++. ..+.. .---+-.+++.+|.|
T Consensus 32 ~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E-~GP~--~~~~~~----~~l~~N~~sW~~~an~lfiD~Pv 104 (300)
T 4az3_A 32 GSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTE-HGPF--LVQPDG----VTLEYNPYSWNLIANVLYLESPA 104 (300)
T ss_dssp TTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHT-TSSE--EECTTS----SCEEECTTCGGGSSEEEEECCST
T ss_pred CCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhc-CCCc--eecCCC----ccccccCccHHhhhcchhhcCCC
Confidence 46778776554 245889999999998887754433 2110 000000 00000 000024689999977
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHhCC----cccceEEEeccC
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 161 (351)
|.|.|.........+..+.++|+..++... ...+++|.|.|+||..+-.+|...- -.++++++-++.
T Consensus 105 GtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 105 GVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp TSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred cccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 899987654433446677777877777532 3468999999999999888876532 247888887764
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=5.7e-05 Score=70.89 Aligned_cols=78 Identities=18% Similarity=0.061 Sum_probs=50.8
Q ss_pred CeEEEEecCC----CCCCCCC-------CCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC
Q 018750 85 GIEVCAFDNR----GMGRSSV-------PVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 85 g~~vi~~D~~----G~G~S~~-------~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
|+-|+.+++| |+..... ......+.+.|....+.-+.+. +|. ++|.|+|+|.||..+..++...
T Consensus 172 ~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~ 251 (585)
T 1dx4_A 172 NVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP 251 (585)
T ss_dssp TCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT
T ss_pred CEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCC
Confidence 7999999999 4443210 1111233455555555444443 343 4799999999999887776642
Q ss_pred --CcccceEEEeccCC
Q 018750 149 --PERVLSLALLNVTG 162 (351)
Q Consensus 149 --p~~v~~lvl~~~~~ 162 (351)
...++++|+.++..
T Consensus 252 ~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 252 VTRGLVKRGMMQSGTM 267 (585)
T ss_dssp TTTTSCCEEEEESCCT
T ss_pred cccchhHhhhhhcccc
Confidence 35689999998763
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=9.1e-05 Score=69.32 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=66.6
Q ss_pred CCeEEEEecCCC---CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC----CCCCCCCCCCCCcc
Q 018750 36 PTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSSVPVKKTEY 108 (351)
Q Consensus 36 ~p~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~----G~G~S~~~~~~~~~ 108 (351)
.|+||++||.+. +...|.. ..|+.. .++.|+.+|+| |+..+........+
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~~--~~la~~---------------------~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~ 187 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYDG--SVLASY---------------------GNVIVITVNYRLGVLGFLSTGDQAAKGNY 187 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSCC--HHHHHH---------------------HTCEEEEECCCCHHHHHCCCSSSSCCCCH
T ss_pred CcEEEEECCCcccCCCCCccCc--hhhhcc---------------------CCEEEEEeCCcCcccccCcCCCCCCCCcc
Confidence 478999999753 3333322 234430 26999999999 44443322111344
Q ss_pred chHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhCC---cccceEEEeccC
Q 018750 109 TTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVT 161 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~ 161 (351)
.+.|....+..+.+. +|. ++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 188 gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 188 GLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred cHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 566666666655554 343 47999999999999988876543 458888988864
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00016 Score=60.83 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=30.2
Q ss_pred hHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCC
Q 018750 110 TKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
++.+.+++.++++.+ ...++++.||||||.+|..++....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHH
Confidence 455666666666554 3358999999999999999998764
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=8.4e-05 Score=68.92 Aligned_cols=119 Identities=13% Similarity=-0.008 Sum_probs=70.4
Q ss_pred CCeEEEEEEcC-----CCCCeEEEEecCCC---CccchH--HHHH-HhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 23 NGIKIFYRTYG-----RGPTKVILITGLAG---THDAWG--PQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 23 ~g~~l~y~~~g-----~~~p~vv~~HG~~~---~~~~~~--~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
|...+..+.-. +..|+||++||.+. +...|. .++. .++. ..++-|+.+
T Consensus 96 dcl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~---------------------~~~~vvv~~ 154 (534)
T 1llf_A 96 DCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLM---------------------GKPIIHVAV 154 (534)
T ss_dssp CCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHT---------------------TCCCEEEEE
T ss_pred CCeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhc---------------------CCCEEEEEe
Confidence 44566655432 12378999999763 332232 2332 2332 148999999
Q ss_pred cCCC----CCCCCCC--CCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC--------Cccc
Q 018750 92 DNRG----MGRSSVP--VKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV--------PERV 152 (351)
Q Consensus 92 D~~G----~G~S~~~--~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~--------p~~v 152 (351)
|+|. +..+... .......+.|....+.-+.++ .|. ++|.|+|+|.||..+...+... +..+
T Consensus 155 nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf 234 (534)
T 1llf_A 155 NYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLF 234 (534)
T ss_dssp CCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESC
T ss_pred CCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchh
Confidence 9993 2221100 001233455655555555444 343 5799999999998777666553 4578
Q ss_pred ceEEEeccCC
Q 018750 153 LSLALLNVTG 162 (351)
Q Consensus 153 ~~lvl~~~~~ 162 (351)
+++|+.++..
T Consensus 235 ~~ai~~Sg~~ 244 (534)
T 1llf_A 235 RAGIMQSGAM 244 (534)
T ss_dssp SEEEEESCCS
T ss_pred HhHhhhccCc
Confidence 9999999853
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.62 E-value=6.2e-05 Score=70.36 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=52.5
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHh--CCcccc
Q 018750 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAM--VPERVL 153 (351)
Q Consensus 85 g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~ 153 (351)
++-|+.+++| |++.+........+.+.|....+..+.++ +|. ++|.|+|+|.||..+..++.. ....++
T Consensus 135 ~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~ 214 (579)
T 2bce_A 135 NVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIK 214 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCS
T ss_pred CEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHH
Confidence 6999999999 55544322211233456666555555444 343 479999999999999887664 245689
Q ss_pred eEEEeccCC
Q 018750 154 SLALLNVTG 162 (351)
Q Consensus 154 ~lvl~~~~~ 162 (351)
++|+.++..
T Consensus 215 ~ai~~Sg~~ 223 (579)
T 2bce_A 215 RAISQSGVG 223 (579)
T ss_dssp EEEEESCCT
T ss_pred HHHHhcCCc
Confidence 999988753
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.57 E-value=6.2e-05 Score=69.99 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=51.6
Q ss_pred CCeEEEEecCCC----CCCCCCC--CCCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHHhC----
Q 018750 84 AGIEVCAFDNRG----MGRSSVP--VKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMV---- 148 (351)
Q Consensus 84 ~g~~vi~~D~~G----~G~S~~~--~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~---- 148 (351)
.++-|+.+|+|. +..+... .....+.+.|....+..+.+.. |. ++|.|+|+|.||..+...+...
T Consensus 155 ~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~ 234 (544)
T 1thg_A 155 QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDN 234 (544)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCC
T ss_pred CCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccc
Confidence 379999999994 2221100 0012334566665555554443 43 5799999999999888776652
Q ss_pred ----CcccceEEEeccCC
Q 018750 149 ----PERVLSLALLNVTG 162 (351)
Q Consensus 149 ----p~~v~~lvl~~~~~ 162 (351)
...++++|+.++..
T Consensus 235 ~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 235 TYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp EETTEESCSEEEEESCCC
T ss_pred cccccccccceEEecccc
Confidence 45699999999854
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00055 Score=52.02 Aligned_cols=67 Identities=18% Similarity=0.276 Sum_probs=56.4
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-----------------------CCceEEEcCC-CccccccChHHH
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PVARMIDLPG-GHLVSHERTEEV 310 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~g-gH~~~~~~p~~~ 310 (351)
..+-.-.++|||.+|+.|.+++.-..+.+.+.+. .+.++..+.+ ||+.+.++|++.
T Consensus 58 ~~Ll~~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a 137 (153)
T 1whs_B 58 RELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQA 137 (153)
T ss_dssp HHHHHTTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHH
T ss_pred HHHHhcCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHH
Confidence 3333346899999999999999999999998873 2567778887 999999999999
Q ss_pred HHHHHHHHHhc
Q 018750 311 NQALIDLIKAS 321 (351)
Q Consensus 311 ~~~i~~fl~~~ 321 (351)
.+.+..||...
T Consensus 138 ~~m~~~fl~~~ 148 (153)
T 1whs_B 138 LVLFQYFLQGK 148 (153)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHCCC
Confidence 99999999864
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00093 Score=55.52 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=73.4
Q ss_pred CCeEEEEEEcCC------CCCeEEEEecCCCCccch-HHHHHH-----------hcCCCCCCCCchhhhcccccCCCCCC
Q 018750 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAW-GPQLKG-----------LAGTDKPNDDDETILQDSVESGDGGA 84 (351)
Q Consensus 23 ~g~~l~y~~~g~------~~p~vv~~HG~~~~~~~~-~~~~~~-----------l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
.+..+.|+-... .+|+||+++|.+|.+..+ ..+.+. |..+-.+++ +
T Consensus 35 ~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~----------------~ 98 (270)
T 1gxs_A 35 NGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWN----------------K 98 (270)
T ss_dssp TTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGG----------------G
T ss_pred CCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchh----------------c
Confidence 367787754332 357899999999988875 544321 111111111 2
Q ss_pred CeEEEEecC-CCCCCCCCCCCC-CccchHhHHHHHHHHHHH-------hCCcceEEEEEchhhHHHHHHHHh--C-----
Q 018750 85 GIEVCAFDN-RGMGRSSVPVKK-TEYTTKIMAKDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAM--V----- 148 (351)
Q Consensus 85 g~~vi~~D~-~G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~-------~~~~~v~lvG~S~Gg~~a~~~a~~--~----- 148 (351)
-.+++.+|. .|.|.|...... ...+-++.++|+..++.. +...+++|.|.| |-.+...+... .
T Consensus 99 ~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~ 177 (270)
T 1gxs_A 99 AANILFAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSP 177 (270)
T ss_dssp TSEEEEECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCT
T ss_pred cccEEEEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhcccccc
Confidence 578999995 699999654321 112334556676666653 344689999999 65544333221 1
Q ss_pred CcccceEEEeccC
Q 018750 149 PERVLSLALLNVT 161 (351)
Q Consensus 149 p~~v~~lvl~~~~ 161 (351)
.-.++++++.++.
T Consensus 178 ~inLkGi~ign~~ 190 (270)
T 1gxs_A 178 FINFQGLLVSSGL 190 (270)
T ss_dssp TCEEEEEEEESCC
T ss_pred ceeeeeEEEeCCc
Confidence 1247899988875
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00075 Score=56.66 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=37.6
Q ss_pred CeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhC
Q 018750 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
+..+...++||......... ....+..+.+++.+.++.+ ...++++.||||||.+|..++...
T Consensus 91 d~~~~~~~~p~~~~~~vh~g-f~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKG-FLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHH-HHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 45566667777421111111 1223455555655555443 224599999999999999988765
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0024 Score=53.81 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=28.1
Q ss_pred hHhHHHHHHHHHHHh----CCcceEEEEEchhhHHHHHHHHhCC
Q 018750 110 TKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP 149 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~----~~~~v~lvG~S~Gg~~a~~~a~~~p 149 (351)
+..+.+++.+.++.+ ...++++.||||||.+|..++....
T Consensus 116 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 344445555554443 3358999999999999999888753
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0083 Score=49.28 Aligned_cols=53 Identities=11% Similarity=0.147 Sum_probs=36.5
Q ss_pred chHhHHHHHHHHHHH----hCCcceEEEEEchhhHHHHHHHHh-----------CCcccceEEEeccC
Q 018750 109 TTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAM-----------VPERVLSLALLNVT 161 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~-----------~p~~v~~lvl~~~~ 161 (351)
+..+=++++...++. -...+++|+|+|.|+.++-.++.. ..++|.++++++-+
T Consensus 52 S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 52 SVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred hHHHHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 334444454444443 344689999999999999887755 23578888888754
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0046 Score=51.78 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=27.4
Q ss_pred hHhHHHHHHHHHHH----hCCcceEEEEEchhhHHHHHHHHhC
Q 018750 110 TKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 110 ~~~~~~dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
+..+.+++.+.++. ....++++.||||||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33444555554443 3345899999999999999988765
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.012 Score=44.60 Aligned_cols=68 Identities=12% Similarity=0.292 Sum_probs=54.0
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCC----------------------------CceEEEcCC-Cccccc
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP----------------------------VARMIDLPG-GHLVSH 304 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~g-gH~~~~ 304 (351)
...+-.-.++||+.+|..|.+++.-..+.+.+.+.- +.+++.+.+ ||+++.
T Consensus 56 ~~~Ll~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~ 135 (155)
T 4az3_B 56 LKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPT 135 (155)
T ss_dssp HHHHHTCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHH
T ss_pred HHHHHHcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChh
Confidence 344545568999999999999999888888877621 113456667 999999
Q ss_pred cChHHHHHHHHHHHHhc
Q 018750 305 ERTEEVNQALIDLIKAS 321 (351)
Q Consensus 305 ~~p~~~~~~i~~fl~~~ 321 (351)
++|+...+.+.+||...
T Consensus 136 dqP~~al~m~~~fl~g~ 152 (155)
T 4az3_B 136 DKPLAAFTMFSRFLNKQ 152 (155)
T ss_dssp HCHHHHHHHHHHHHTTC
T ss_pred hCHHHHHHHHHHHHcCC
Confidence 99999999999999753
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.00 E-value=0.092 Score=41.22 Aligned_cols=78 Identities=13% Similarity=0.064 Sum_probs=49.8
Q ss_pred CCeEEEEe--cCCCCCCCC-CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC----cccceEE
Q 018750 84 AGIEVCAF--DNRGMGRSS-VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLA 156 (351)
Q Consensus 84 ~g~~vi~~--D~~G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~lv 156 (351)
+...|+.+ ++|-.-... .......-...++.+.|......-...+++|+|+|.|+.++-..+...| ++|.+++
T Consensus 51 ~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avv 130 (197)
T 3qpa_A 51 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTV 130 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEE
T ss_pred CceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEE
Confidence 35778888 676432110 0000011124445555555555555678999999999999998877765 6799999
Q ss_pred EeccC
Q 018750 157 LLNVT 161 (351)
Q Consensus 157 l~~~~ 161 (351)
+++-+
T Consensus 131 lfGdP 135 (197)
T 3qpa_A 131 LFGYT 135 (197)
T ss_dssp EESCT
T ss_pred EeeCC
Confidence 98854
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0097 Score=49.54 Aligned_cols=41 Identities=27% Similarity=0.233 Sum_probs=27.8
Q ss_pred HHHHhCCcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccC
Q 018750 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVT 161 (351)
Q Consensus 120 ~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~ 161 (351)
+++.....++++.|||+||.+|..++.... .+|. ++..+++
T Consensus 118 ~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 118 QASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 333334468999999999999998887642 3455 5555543
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.02 Score=47.47 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCcceEEEEEchhhHHHHHHHHh
Q 018750 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 116 dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
.+..+++.....++++.|||+||.+|..++..
T Consensus 113 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 113 EVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 34444444444689999999999999987765
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.022 Score=47.83 Aligned_cols=47 Identities=21% Similarity=0.224 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh----CCcccceEEEeccC
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM----VPERVLSLALLNVT 161 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~----~p~~v~~lvl~~~~ 161 (351)
+.+..+++.....++++.|||+||.+|..+|.. .|.....++..+++
T Consensus 126 ~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 126 TAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 344444444455689999999999999988764 34445556666654
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.051 Score=41.25 Aligned_cols=66 Identities=24% Similarity=0.334 Sum_probs=52.9
Q ss_pred HhhccCccEEEEeecCCccCCHHHHHHHHHHhCC--------------------------CceEEEcCC-CccccccChH
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP--------------------------VARMIDLPG-GHLVSHERTE 308 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~g-gH~~~~~~p~ 308 (351)
.+-+-.++|||.+|+.|.+++.-..+.+.+.+.- +.++..+.+ ||+.+.++|+
T Consensus 61 ~Ll~~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~ 140 (158)
T 1gxs_B 61 ELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPA 140 (158)
T ss_dssp HHHHTTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHH
T ss_pred HHHHcCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcH
Confidence 3333468999999999999999888888877620 123556677 9999999999
Q ss_pred HHHHHHHHHHHhc
Q 018750 309 EVNQALIDLIKAS 321 (351)
Q Consensus 309 ~~~~~i~~fl~~~ 321 (351)
...+.+.+||...
T Consensus 141 ~al~m~~~fl~g~ 153 (158)
T 1gxs_B 141 QAFLLFKQFLKGE 153 (158)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999864
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.48 E-value=0.019 Score=48.79 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC
Q 018750 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
.+.+.++++.....++++.|||+||.+|..+|...
T Consensus 141 ~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 141 GPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 33444455444556899999999999999888754
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.017 Score=49.43 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=19.9
Q ss_pred CCcceEEEEEchhhHHHHHHHHhC
Q 018750 125 GWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 125 ~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
...++++.|||+||.+|..++...
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHHH
Confidence 445899999999999999887653
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.31 Score=41.09 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=46.9
Q ss_pred CCeEEEEecCCCCCCCCCC-CCCCcc--chHhHHHHHHHHHH----HhCCcceEEEEEchhhHHHHHHHHh--------C
Q 018750 84 AGIEVCAFDNRGMGRSSVP-VKKTEY--TTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAM--------V 148 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~-~~~~~~--~~~~~~~dl~~~l~----~~~~~~v~lvG~S~Gg~~a~~~a~~--------~ 148 (351)
+...++.++++-.-..... .....| +..+=++++...++ .-...+++|+|+|.|+.++-.++.. .
T Consensus 83 ~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~ 162 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVD 162 (302)
T ss_dssp TTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSC
T ss_pred CcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCC
Confidence 4677888888754321100 000122 33333344444443 3344689999999999999887753 2
Q ss_pred CcccceEEEeccC
Q 018750 149 PERVLSLALLNVT 161 (351)
Q Consensus 149 p~~v~~lvl~~~~ 161 (351)
+++|.++++++-+
T Consensus 163 ~~~V~aVvLfGdP 175 (302)
T 3aja_A 163 EDLVLGVTLIADG 175 (302)
T ss_dssp GGGEEEEEEESCT
T ss_pred hHHEEEEEEEeCC
Confidence 4679999998754
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.21 Score=38.82 Aligned_cols=77 Identities=9% Similarity=-0.025 Sum_probs=46.5
Q ss_pred CeEEEEec--CCCCCCCCCC-CCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC----cccceEEE
Q 018750 85 GIEVCAFD--NRGMGRSSVP-VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLAL 157 (351)
Q Consensus 85 g~~vi~~D--~~G~G~S~~~-~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~lvl 157 (351)
...|+.++ +|-.-..... .....-...+..+.+......-...+++|+|+|.|+.++-..+...| ++|.++++
T Consensus 48 ~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvl 127 (187)
T 3qpd_A 48 DVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVL 127 (187)
T ss_dssp CEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEE
T ss_pred CceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEE
Confidence 57888888 7632210000 00000112333333344444445578999999999999998876655 57899999
Q ss_pred eccC
Q 018750 158 LNVT 161 (351)
Q Consensus 158 ~~~~ 161 (351)
++-+
T Consensus 128 fGdP 131 (187)
T 3qpd_A 128 FGYT 131 (187)
T ss_dssp ESCT
T ss_pred eeCC
Confidence 8854
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.062 Score=42.36 Aligned_cols=77 Identities=10% Similarity=-0.016 Sum_probs=48.6
Q ss_pred CeEEEEe--cCCCCCCCC-CCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC----cccceEEE
Q 018750 85 GIEVCAF--DNRGMGRSS-VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLAL 157 (351)
Q Consensus 85 g~~vi~~--D~~G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~lvl 157 (351)
...|+.+ ++|-.-... .......-...++.+.|......-...+++|+|+|.|+.++-.++...| ++|.++++
T Consensus 60 ~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvl 139 (201)
T 3dcn_A 60 DVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVL 139 (201)
T ss_dssp GEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEE
T ss_pred ceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEE
Confidence 5678888 566322110 0000011234455555555555556679999999999999988776655 57889999
Q ss_pred eccC
Q 018750 158 LNVT 161 (351)
Q Consensus 158 ~~~~ 161 (351)
++-+
T Consensus 140 fGdP 143 (201)
T 3dcn_A 140 FGYT 143 (201)
T ss_dssp ETCT
T ss_pred eeCc
Confidence 8854
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=93.87 E-value=0.12 Score=41.05 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=44.7
Q ss_pred CeEEEEecCCCCC-CCCCCCCCCcc--chHhHHHHHHHHHHH----hCCcceEEEEEchhhHHHHHHHHh----------
Q 018750 85 GIEVCAFDNRGMG-RSSVPVKKTEY--TTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAM---------- 147 (351)
Q Consensus 85 g~~vi~~D~~G~G-~S~~~~~~~~~--~~~~~~~dl~~~l~~----~~~~~v~lvG~S~Gg~~a~~~a~~---------- 147 (351)
+-.+..+++|-.. .+.... ..| +..+=++++...++. -...+++|+|+|.|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~~~--~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1g66_A 35 GSTAEAINYPACGGQSSCGG--ASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTN 112 (207)
T ss_dssp TCEEEECCCCCCSSCGGGTS--CCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccccCC--cchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhccccccccccc
Confidence 3467888887532 211101 122 333334444444443 345689999999999999887741
Q ss_pred ----CC----cccceEEEeccC
Q 018750 148 ----VP----ERVLSLALLNVT 161 (351)
Q Consensus 148 ----~p----~~v~~lvl~~~~ 161 (351)
.| ++|.++++++-+
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 113 TAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCT
T ss_pred CCCCCChhhhccEEEEEEEcCC
Confidence 22 468888888754
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=93.42 E-value=0.16 Score=40.35 Aligned_cols=75 Identities=17% Similarity=0.083 Sum_probs=44.6
Q ss_pred CeEEEEecCCCCC-CCCCCCCCCcc--chHhHHHHHHHHHH----HhCCcceEEEEEchhhHHHHHHHHh----------
Q 018750 85 GIEVCAFDNRGMG-RSSVPVKKTEY--TTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAM---------- 147 (351)
Q Consensus 85 g~~vi~~D~~G~G-~S~~~~~~~~~--~~~~~~~dl~~~l~----~~~~~~v~lvG~S~Gg~~a~~~a~~---------- 147 (351)
+-++..+++|-.. .+.... ..| +..+=++++...++ .-...+++|+|+|.|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~~~--~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQASCGG--ISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITN 112 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccccCC--ccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccC
Confidence 4467888888542 211101 122 23333444444443 3345689999999999999887741
Q ss_pred ----CC----cccceEEEeccC
Q 018750 148 ----VP----ERVLSLALLNVT 161 (351)
Q Consensus 148 ----~p----~~v~~lvl~~~~ 161 (351)
.| ++|.++++++-+
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 113 TAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCT
T ss_pred CCCCCChHHhccEEEEEEEcCC
Confidence 22 468888888754
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.13 Score=40.89 Aligned_cols=50 Identities=12% Similarity=-0.006 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC--C----cccceEEEeccC
Q 018750 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--P----ERVLSLALLNVT 161 (351)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p----~~v~~lvl~~~~ 161 (351)
++.+.|......-...+++|+|+|.|+.++-.++... | ++|.++++++-+
T Consensus 62 ~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 62 DIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 3333333433333456899999999999998877654 3 468999998843
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=91.57 E-value=0.14 Score=44.26 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=19.1
Q ss_pred CcceEEEEEchhhHHHHHHHHh
Q 018750 126 WKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 126 ~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
..++++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3579999999999999988765
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=89.19 E-value=0.064 Score=47.34 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhC
Q 018750 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 113 ~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
+.+.|..+++.... .++++.|||+||.+|..+|...
T Consensus 212 Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 212 VLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 34445555554432 3689999999999999888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 351 | ||||
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 4e-19 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 4e-19 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 5e-19 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 1e-18 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 2e-18 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 2e-18 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-17 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 1e-17 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 2e-17 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 2e-17 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-17 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 4e-17 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 3e-16 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 4e-16 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 9e-16 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 1e-14 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 1e-14 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 1e-14 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 3e-14 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 1e-13 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-13 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 3e-13 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 5e-13 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 1e-12 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 5e-12 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 8e-12 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 3e-11 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 2e-09 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 2e-09 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 1e-08 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 3e-08 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 1e-06 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 1e-05 | |
| d2vata1 | 376 | c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalospor | 1e-05 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 5e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 8e-05 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 2e-04 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 0.001 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 0.001 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 0.003 |
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.5 bits (207), Expect = 4e-19
Identities = 56/324 (17%), Positives = 104/324 (32%), Gaps = 49/324 (15%)
Query: 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
+++ + G GP V L G + +W Q+ LA
Sbjct: 19 KPRVRLHFVELGSGPA-VCLCHGFPESWYSWRYQIPALA--------------------- 56
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
AG V A D +G G SS P + EY +++ K+++ +D LG QA GH G M+
Sbjct: 57 -QAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLV 115
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+A PERV ++A LN + + ++ E A
Sbjct: 116 WYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNL 175
Query: 202 QEYLEEYVGSSTRRAI------------------------LYQEYVKGISATGMQSNYGF 237
+ +S + + +E ++ +S +
Sbjct: 176 SRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRG 235
Query: 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP 297
+ R ++ D + ++ + + + P + +
Sbjct: 236 PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIE 294
Query: 298 G-GHLVSHERTEEVNQALIDLIKA 320
GH ++ EVNQ LI + +
Sbjct: 295 DCGHWTQMDKPTEVNQILIKWLDS 318
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 84.2 bits (206), Expect = 4e-19
Identities = 31/301 (10%), Positives = 69/301 (22%), Gaps = 30/301 (9%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G ++ Y G G ++ G + W + A
Sbjct: 16 KGRRMAYIDEGTGDP-ILFQHGNPTSSYLWRNIMPHCA---------------------- 52
Query: 83 GAGIEVCAFDNRGMG---RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+ A D GMG + + + + + H G+
Sbjct: 53 -GLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSA 111
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+ A ERV +A + + + +A
Sbjct: 112 LGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQ 171
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY-GFDGQIHACWMHKMTQKDIQTIR 258
+ + + A G + S + + + +
Sbjct: 172 VLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLS 231
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLI 318
+ I+ + R P I + G H + + +E+ A+ +
Sbjct: 232 ESPIPKLFINAEPGALTTG-RMRDFCRTW-PNQTEITVAGAHFIQEDSPDEIGAAIAAFV 289
Query: 319 K 319
+
Sbjct: 290 R 290
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 83.8 bits (205), Expect = 5e-19
Identities = 55/302 (18%), Positives = 93/302 (30%), Gaps = 29/302 (9%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+KI Y G GPT ++L+ G G W + LA
Sbjct: 16 PDVKIHYVREGAGPT-LLLLHGWPGFWWEWSKVIGPLA---------------------- 52
Query: 83 GAGIEVCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+V D RG G S ++Y+ A D AL+D LG ++A+V GH A++
Sbjct: 53 -EHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIV 111
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
K +RV+ A+ + F F
Sbjct: 112 LHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVC 171
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ + + S R +L +E ++ M+ + G + + +
Sbjct: 172 KKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHT 231
Query: 261 GFL--VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDL 317
V++I G D K Y M + GH + E+ E +
Sbjct: 232 MSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTA 291
Query: 318 IK 319
+
Sbjct: 292 FR 293
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 83.0 bits (203), Expect = 1e-18
Identities = 55/312 (17%), Positives = 103/312 (33%), Gaps = 36/312 (11%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
++++ +G P ++L+ G + W +
Sbjct: 8 GDVELWSDDFGDPADPA-LLLVMGGNLSALGWPDEFARRLAD------------------ 48
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI-MAKDVIALMDHLGWKQAHVFGHSMGAM 139
G+ V +D+R GRS+ +A D +A++D G +AHV G SMGA
Sbjct: 49 ---GGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGAT 105
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI---------RFFRAKTPEK 190
I +A +R+ SL +L G ++ F A
Sbjct: 106 ITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMN 165
Query: 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250
+ A ++ + + S T EY + + +
Sbjct: 166 QPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPP 225
Query: 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309
+R VI HD IA + + LA + P AR+ ++PG GH +
Sbjct: 226 PSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGP 284
Query: 310 VNQALIDLIKAS 321
+ + ++ +++
Sbjct: 285 LAEVILAHTRSA 296
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 81.9 bits (200), Expect = 2e-18
Identities = 56/298 (18%), Positives = 95/298 (31%), Gaps = 35/298 (11%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G +I+++ +G G V+ G D W Q++ L+
Sbjct: 7 DGTQIYFKDWGSGKP-VLFSHGWLLDADMWEYQMEYLS---------------------- 43
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
G AFD RG GRS P +Y T + L V G +A
Sbjct: 44 SRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLKEVT-LVGFSMGGGDVAR 102
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
+A RV L LL K D F R KT + + ++
Sbjct: 103 YIARHGSARVAGLVLLGAV--TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNA 160
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ G + + Q + A+ + + M + D+ T+
Sbjct: 161 PFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLV---- 216
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
IHG D I ++A +L A + H + +++N+ L+ +K
Sbjct: 217 ----IHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 81.5 bits (199), Expect = 2e-18
Identities = 56/301 (18%), Positives = 98/301 (32%), Gaps = 38/301 (12%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G++IFY+ +G+G V+ I G DAW QLK +
Sbjct: 7 DGVEIFYKDWGQGRP-VVFIHGWPLNGDAWQDQLKAVV---------------------- 43
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM-GAMIA 141
AG A D RG G Y A D+ L+ L + + HSM G +A
Sbjct: 44 DAGYRGIAHDRRGHGH--STPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELA 101
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+ R+ S LL+ K + +R+
Sbjct: 102 RYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQF-WKDTAE 160
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
+ G+ + + ++ T D + + + + DI T+
Sbjct: 161 GFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLV--- 217
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV--SHERTEEVNQALIDLI 318
+HG D + I R + ++ P A + G H + E+ N+ L++ +
Sbjct: 218 -----VHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272
Query: 319 K 319
Sbjct: 273 N 273
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 79.5 bits (194), Expect = 1e-17
Identities = 40/294 (13%), Positives = 85/294 (28%), Gaps = 44/294 (14%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
I+++T G+G ++L+ G + W + L+ +
Sbjct: 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-----------------------SHF 38
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
+ D G GRS + + +A G S+G ++A ++A
Sbjct: 39 TLHLVDLPGFGRSRGFGALSLADMAEA-------VLQQAPDKAIWLGWSLGGLVASQIAL 91
Query: 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE 206
PERV +L + + S + K + Q +E
Sbjct: 92 THPERVRALVTVASSPC------------FSARDEWPGIKPDVLAGFQQQLSDDQQRTVE 139
Query: 207 EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266
++ T ++ + + T + ++ T Q +++
Sbjct: 140 RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLR 199
Query: 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++G D + L + P + H E L+ L +
Sbjct: 200 LYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 252
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 79.5 bits (194), Expect = 1e-17
Identities = 58/298 (19%), Positives = 99/298 (33%), Gaps = 35/298 (11%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ I Y G G T VI++ G W + +
Sbjct: 18 SDFNIHYNEAGNGET-VIMLHGGGPGAGGWSNYYRNVGPFVD------------------ 58
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V D+ G +S V E + A+ V LMD L +AH+ G++MG A
Sbjct: 59 -AGYRVILKDSPGFNKS-DAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATAL 116
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
A P+R+ L L+ G G + ++ + + + + + E + Y Q
Sbjct: 117 NFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQ 176
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ E L Q + I A + I++
Sbjct: 177 SLITEE---------LLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAK-- 225
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+ GR D + + +L + AR+ GH E +E N+ +ID ++
Sbjct: 226 -TFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWEHADEFNRLVIDFLR 281
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 79.1 bits (193), Expect = 2e-17
Identities = 58/303 (19%), Positives = 102/303 (33%), Gaps = 46/303 (15%)
Query: 23 NGIKIFYRTYGRGPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G+ Y G G VILI G + W + L+
Sbjct: 11 AGVLTNYHDVGEGQP-VILIHGSGPGVSAYANWRLTIPALS------------------- 50
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D G G + P + + MD L ++AH+ G++ G
Sbjct: 51 ----KFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGI-MDALEIEKAHIVGNAFGGG 105
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A A ERV + L+ G F L+ A+ + R +D+ +
Sbjct: 106 LAIATALRYSERVDRMVLMGAAGTRFDVTEGLN------AVWGYTPSIENMRNLLDIFAY 159
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+E A L E S+ + + + +DI+T+ +
Sbjct: 160 DRSLVTDEL-------ARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPN 212
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
+IHGR D + + + RL E + A++ GH E+T+ N+ +++
Sbjct: 213 ETL---IIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFF 268
Query: 319 KAS 321
+
Sbjct: 269 NEA 271
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 79.2 bits (193), Expect = 2e-17
Identities = 54/299 (18%), Positives = 95/299 (31%), Gaps = 35/299 (11%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G +I+Y+ +G G ++ G D+W Q+ LA
Sbjct: 7 DGTQIYYKDWGSGQP-IVFSHGWPLNADSWESQMIFLA---------------------- 43
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
G V A D RG GR + A D+ L++HL + A +FG S G
Sbjct: 44 AQGYRVIAHDRRGHGR--SSQPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVA 101
Query: 143 KLA-AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+ RV L+ L + + + + D Y
Sbjct: 102 RYIGRHGTARVAKAGLI-----SAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYK 156
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
+ G + A V GM + + + +D++ I
Sbjct: 157 DLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
V+HG D + I + + L + + G H ++ +++N L+ IK
Sbjct: 217 L---VVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 79.1 bits (193), Expect = 2e-17
Identities = 41/305 (13%), Positives = 89/305 (29%), Gaps = 37/305 (12%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G ++ Y G G V+ + G + W + +A
Sbjct: 15 LGERMHYVDVGPRDGTP-VLFLHGNPTSSYLWRNIIPHVA-------------------- 53
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
A D GMG+ +Y + + A ++ LG ++ + H G+ +
Sbjct: 54 ---PSHRCIAPDLIGMGK--SDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSAL 108
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A PERV +A + + + R + +
Sbjct: 109 GFHWAKRNPERVKGIACMEFIRPIP---TWDEWPEFARETFQAFRTADVGRELIIDQNAF 165
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW----MHKMTQKDIQT 256
+ L + V + + + + F +I + + + +
Sbjct: 166 IEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNW 225
Query: 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
+ + + G V+ A RLAE L P + +D+ H + + + + +
Sbjct: 226 LHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIA 284
Query: 316 DLIKA 320
+
Sbjct: 285 RWLPG 289
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 78.4 bits (191), Expect = 4e-17
Identities = 56/300 (18%), Positives = 84/300 (28%), Gaps = 31/300 (10%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I+++Y G G V+LI G +W Q + L
Sbjct: 9 NSTPIELYYEDQGSGQP-VVLIHGYPLDGHSWERQTRELL-------------------- 47
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V +D RG G S V A L V +
Sbjct: 48 --AQGYRVITYDRRGFGG-SSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGEL 104
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A +A ERV LA L A R A D +
Sbjct: 105 ARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYK 164
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ L+E +GS + + I + + + I +
Sbjct: 165 NFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPT-- 222
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++HG D I I R + P A +++ G H + +EVN AL +
Sbjct: 223 ----LILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 75.7 bits (184), Expect = 3e-16
Identities = 50/300 (16%), Positives = 79/300 (26%), Gaps = 33/300 (11%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I ++Y +G G V+LI G + +W Q L
Sbjct: 9 NSTSIDLYYEDHGTGQP-VVLIHGFPLSGHSWERQSAALL-------------------- 47
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V +D RG G+SS P +Y T + + L F G +
Sbjct: 48 --DAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVA 105
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ R+ +A L + +
Sbjct: 106 RYVSSYG-TARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFF 164
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ Y L + + A I
Sbjct: 165 NDFY--------NLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRI 216
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++HG D I R+ K P A +++ G H + EEVN AL+ +
Sbjct: 217 DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 76.7 bits (187), Expect = 4e-16
Identities = 43/337 (12%), Positives = 83/337 (24%), Gaps = 67/337 (19%)
Query: 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92
GR P L GL + W L + D AG +V +
Sbjct: 56 GRRPV-AFLQHGLLASATNWISNLPNNSLAFILAD----------------AGYDVWLGN 98
Query: 93 NRGMGRSSVPVKKT------------EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+RG + + + E + + ++ G + H GHS G I
Sbjct: 99 SRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTI 158
Query: 141 ACKLAAMVPERVLSLALLNVTGG----GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
+ P+ + + L + +
Sbjct: 159 GFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFF 218
Query: 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256
D + E L+ M + A + Q
Sbjct: 219 DQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQA 278
Query: 257 IRSAGFL------------------------------VSVIHGRHDVIAQICYARRLAEK 286
++S F ++V +G +D++A L K
Sbjct: 279 VKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSK 338
Query: 287 LYPVARMIDLPG-GHL---VSHERTEEVNQALIDLIK 319
L + +P HL + + + V ++ ++
Sbjct: 339 LPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMG 375
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 74.6 bits (181), Expect = 9e-16
Identities = 47/302 (15%), Positives = 91/302 (30%), Gaps = 29/302 (9%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
NGI I+Y+ K ++ + G G + L+ +
Sbjct: 10 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK------------------- 50
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
GI V +D G GRS P + + + G ++ + G S G +
Sbjct: 51 ---EGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGAL 107
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A A + + L + +++ + ++ A + + Y
Sbjct: 108 ALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEY 167
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD--IQTIR 258
+ Y R E +K + ++ Y + + + I
Sbjct: 168 QEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKIS 227
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDL 317
+ + G +D + AR + EK+ + + HL E E N+ L D
Sbjct: 228 AIKIPTLITVGEYDEVTPN-VARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDF 285
Query: 318 IK 319
I
Sbjct: 286 IL 287
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.9 bits (172), Expect = 1e-14
Identities = 32/285 (11%), Positives = 79/285 (27%), Gaps = 31/285 (10%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
VI++ GL + ++ L+ + + G V D
Sbjct: 5 VIVVHGLFDSSYSFRHLLEYIN--------------------ETHPGTVVTVLDLFDGRE 44
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE----RVLS 154
S P+ + + V+ +M H+ +S G ++ L +++ + +S
Sbjct: 45 SLRPL---WEQVQGFREAVVPIMAKAPQ-GVHLICYSQGGLVCRALLSVMDDHNVDSFIS 100
Query: 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR 214
L+ + G K T + + +P + + + + + Y+ +S+
Sbjct: 101 LSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSF 160
Query: 215 RAILYQEYVKGISATGMQSNYGFDG--QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272
A++ E + ++ I +T +V+
Sbjct: 161 LALINGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQ 220
Query: 273 VIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++ + G H H +
Sbjct: 221 LVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEP 265
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 70.8 bits (171), Expect = 1e-14
Identities = 55/301 (18%), Positives = 89/301 (29%), Gaps = 35/301 (11%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G IFY+ +G G V+ G + D W Q+
Sbjct: 7 DGTNIFYKDWGPRDGLP-VVFHHGWPLSADDWDNQMLFFLS------------------- 46
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V A D RG GRS P + T + L H+ + G +
Sbjct: 47 ---HGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEALDLRGAV-HIGHSTGGGEV 102
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A +A P RV L++ + T + A + Y
Sbjct: 103 ARYVARAEPGRVAKAVLVS-----AVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFY 157
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ G + A + Q + GM + A + D++ I
Sbjct: 158 IDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP 217
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
V HG D + A + +L A + G H + E +N L+ +K
Sbjct: 218 VL---VAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274
Query: 320 A 320
+
Sbjct: 275 S 275
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 71.4 bits (173), Expect = 1e-14
Identities = 56/316 (17%), Positives = 94/316 (29%), Gaps = 48/316 (15%)
Query: 22 DNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
D+ +++ G G V+++ G G +
Sbjct: 19 DDRHTLYFEQCGNPHGKP-VVMLHGGPGGGCNDKMRRFHDP------------------- 58
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
A + FD RG GRS+ + TT + D+ L HLG + VFG S G+
Sbjct: 59 ----AKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGST 114
Query: 140 IACKLAAMVPERVLSLALLNVT-----------GGGFQCCPKLDLQTLSIAIRFFRAKTP 188
+A A P++V L L + G + AI
Sbjct: 115 LALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADL 174
Query: 189 EKRAAVDLDTHYSQEYLE--------EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
L + L E S + + +
Sbjct: 175 MSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYF 234
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-G 299
++ + Q R A ++HGR+DV+ + A L + P A++ P G
Sbjct: 235 VNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASG 293
Query: 300 HLVSH-ERTEEVNQAL 314
H E + + +A
Sbjct: 294 HSAFEPENVDALVRAT 309
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 70.3 bits (171), Expect = 3e-14
Identities = 29/140 (20%), Positives = 46/140 (32%), Gaps = 32/140 (22%)
Query: 31 TYGRGPTKVILITGLAGTH------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84
TY VIL+ GLAGT D W L
Sbjct: 3 TYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQS----------------------H 40
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
G +V + G P + + V ++ G + ++ GHS G + + +
Sbjct: 41 GAKVYVANLSGFQSDDGP----NGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYV 96
Query: 145 AAMVPERVLSLALLNVTGGG 164
AA+ P+ V S+ + G
Sbjct: 97 AAVAPQLVASVTTIGTPHRG 116
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 68.4 bits (165), Expect = 1e-13
Identities = 55/323 (17%), Positives = 94/323 (29%), Gaps = 52/323 (16%)
Query: 22 DNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+G +I++ G G + I G G + +
Sbjct: 19 GDGHRIYWELSGNPNGKP-AVFIHGGPGGGISPHHRQLFDP------------------- 58
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+V FD RG GRS TT + D+ L + G +Q VFG S G+
Sbjct: 59 ----ERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGST 114
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK--------- 190
+A A PERV + L + Q S +
Sbjct: 115 LALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDV 174
Query: 191 ---------RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQI 241
A + ++ + + T +
Sbjct: 175 IAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFT 234
Query: 242 HACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GH 300
H ++ Q ++HGR+D+ Q+ A LA+ P A + + G GH
Sbjct: 235 HLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGH 293
Query: 301 LVSHERTEEVNQALIDLIKASEK 323
++Q L+ A+++
Sbjct: 294 SYDEP--GILHQ----LMIATDR 310
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 67.3 bits (162), Expect = 2e-13
Identities = 31/286 (10%), Positives = 77/286 (26%), Gaps = 33/286 (11%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G +L+ G +W L AG +V A D
Sbjct: 2 GKH-FVLVHGACHGGWSWYKLKPLLEA----------------------AGHKVTALDLA 38
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154
G +++ + + ++ + GHS+G M P+++ +
Sbjct: 39 ASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA 98
Query: 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR 214
L L+ + + + + + +
Sbjct: 99 AVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKL 158
Query: 215 RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274
+ E + S+ S+ + A + ++ + I D
Sbjct: 159 YQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRV--------YIVCTEDKG 210
Query: 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+ R + + V I++ G H+ +++ +L+++
Sbjct: 211 IPEEFQRWQIDNI-GVTEAIEIKGADHMAMLCEPQKLCASLLEIAH 255
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 66.8 bits (161), Expect = 3e-13
Identities = 46/300 (15%), Positives = 88/300 (29%), Gaps = 48/300 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G++ Y G+G VILI G + W + LA
Sbjct: 10 GGVETRYLEAGKGQP-VILIHGGGAGAESEGNWRNVIPILA------------------- 49
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D G G+++ P + +I + K + G+SMG
Sbjct: 50 ----RHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKV-SIVGNSMGGA 104
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
++ + E V +L L+ G + + T
Sbjct: 105 TGLGVSVLHSELVNALVLMGSAGLVVEIHE------------------DLRPIINYDFTR 146
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+L + + + + + AT + + + D + IR
Sbjct: 147 EGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK 206
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
V+ G+ D + + A + + + + +P GH E E+ A + +
Sbjct: 207 VQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 66.3 bits (161), Expect = 5e-13
Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 34/139 (24%)
Query: 31 TYGRGPTKVILITGLAGTH-----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
TY + ++L G+ G D W L G
Sbjct: 2 TYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR----------------------DG 39
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
+V + + S E + + + V ++ G + ++ GHS G +A
Sbjct: 40 AQVYVTEVSQLDTS-------EVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVA 92
Query: 146 AMVPERVLSLALLNVTGGG 164
A+ P+ + S + G
Sbjct: 93 AVRPDLIASATSVGAPHKG 111
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 64.5 bits (155), Expect = 1e-12
Identities = 31/281 (11%), Positives = 69/281 (24%), Gaps = 34/281 (12%)
Query: 40 ILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99
+LI + W L G +V A D G
Sbjct: 6 VLIHTICHGAWIWHKLKPLLEA----------------------LGHKVTALDLAASGVD 43
Query: 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159
+++ + + L ++ + G S G + A E++ + N
Sbjct: 44 PRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHN 103
Query: 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILY 219
+ CP + L ++ T + +E G +L
Sbjct: 104 SVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYT----------KDGKEITGLKLGFTLLR 153
Query: 220 QEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279
+ + + + + D I +
Sbjct: 154 ENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEF 213
Query: 280 ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
E ++ + G H + +T+E+ + L ++
Sbjct: 214 QLWQIENY-KPDKVYKVEGGDHKLQLTKTKEIAEILQEVAD 253
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 64.3 bits (155), Expect = 5e-12
Identities = 43/321 (13%), Positives = 85/321 (26%), Gaps = 43/321 (13%)
Query: 23 NGIKIFY---RTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G+ I + + + L+ G G+ + P L+ E
Sbjct: 90 EGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFRE----------------EY 133
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+ G SS P ++ A+ V LM LG+ ++
Sbjct: 134 TPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGS 193
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+L + + ++ L P ++ + + R + H
Sbjct: 194 FVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEH 253
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISAT-GMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
++ +V SS+ A+L K + + + W+ + + I T R
Sbjct: 254 STRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYR 313
Query: 259 SAGFL-------------------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G 298
D+ R + D G
Sbjct: 314 ETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVP---RSWIATTGNLVFFRDHAEG 370
Query: 299 GHLVSHERTEEVNQALIDLIK 319
GH + ER E+ L ++
Sbjct: 371 GHFAALERPRELKTDLTAFVE 391
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 63.0 bits (151), Expect = 8e-12
Identities = 40/301 (13%), Positives = 81/301 (26%), Gaps = 26/301 (8%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G++ Y G + + G + + A
Sbjct: 32 PGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE------------------- 72
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+G V A D G G+S PV + +YT + ++AL++ L + + G +
Sbjct: 73 ---SGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFL 129
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
L P R L ++N ++ F A + DL
Sbjct: 130 GLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQ 189
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ + + A + G++ Q + T+
Sbjct: 190 FMKRWAPTLTEAEASAYAAP-FPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDW 248
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+ G D + + + +++ GH V + +AL +
Sbjct: 249 NGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAE 308
Query: 320 A 320
Sbjct: 309 T 309
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 61.1 bits (146), Expect = 3e-11
Identities = 42/294 (14%), Positives = 82/294 (27%), Gaps = 42/294 (14%)
Query: 28 FYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87
F + R P V+L+ GL G+ W P L LA
Sbjct: 9 FAKPTARTPL-VVLVHGLLGSGADWQPVLSHLA----------------------RTQCA 45
Query: 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147
D G G + + + + + G+S+G + A
Sbjct: 46 ALTLDLPGHGTNPERHCDN-FAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQ 104
Query: 148 VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEE 207
L+L + GG F + + + + ++ L Y Q
Sbjct: 105 GAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVF-- 162
Query: 208 YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267
+ L E + + A + + + +++ + +
Sbjct: 163 --------SSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYV 214
Query: 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320
G D ++LAE + GH V HE+ + + + +I +
Sbjct: 215 CGEQDS-----KFQQLAES--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHS 261
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 52.8 bits (126), Expect = 2e-09
Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 39/144 (27%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G+ + + G+GP +++ + +
Sbjct: 9 YGLNLVFDRVGKGPPVLLV-------AEEASRWPE-----------------------AL 38
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
G D G GR+ P + +A V + V +G +
Sbjct: 39 PEGYAFYLLDLPGYGRTEGP----RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGP 94
Query: 143 KLAA-----MVPERVLSLALLNVT 161
L A + E V +L+
Sbjct: 95 HLEALGLRALPAEGVEVAEVLSSK 118
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 55.3 bits (131), Expect = 2e-09
Identities = 43/307 (14%), Positives = 77/307 (25%), Gaps = 40/307 (13%)
Query: 20 LNDNGIKIFYRTYGR--GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQ 74
+ G P V+L+ G A W P + LA
Sbjct: 9 FPSGTLASHALVAGDPQSPA-VVLLHGAGPGAHAASNWRPIIPDLA-------------- 53
Query: 75 DSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGH 134
V A D G G+S P + + + + L H
Sbjct: 54 ---------ENFFVVAPDLIGFGQSEYPETYPGHIMSWVG-MRVEQILGLMNHFGIEKSH 103
Query: 135 SMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194
+G + + + G L+ + F+ +
Sbjct: 104 IVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYREL 163
Query: 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
Y E R + + M + + + +
Sbjct: 164 IHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPH 223
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ V HGR D I + + L + L A ++ L GH ER + +
Sbjct: 224 DVL--------VFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPM 274
Query: 314 LIDLIKA 320
L++ +A
Sbjct: 275 LMEHFRA 281
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 53.0 bits (125), Expect = 1e-08
Identities = 34/299 (11%), Positives = 84/299 (28%), Gaps = 66/299 (22%)
Query: 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
K F+ + G V+L+ G G + L G
Sbjct: 3 KPFF--FEAGERAVLLLHGFTGNSADVRMLGRFLE----------------------SKG 38
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMA-KDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
A +G G + T + + + G+++ V G S+G + + KL
Sbjct: 39 YTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKL 98
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
VP C + +++ E + ++
Sbjct: 99 GYTVPIEG-----------IVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 147
Query: 205 LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264
+E + + ++ +
Sbjct: 148 ME---------------------------KFKQTPMKTLKALQELIADVRDHLDLIYAPT 180
Query: 265 SVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHER-TEEVNQALIDLIKA 320
V+ RHD + A + ++ PV ++ GH+++ ++ +++++ + +++
Sbjct: 181 FVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 239
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 51.9 bits (123), Expect = 3e-08
Identities = 37/309 (11%), Positives = 76/309 (24%), Gaps = 73/309 (23%)
Query: 22 DNGIKI-FYRTYGRGPTK-----VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQD 75
+NG ++ + T + +++ +G A D + + L+
Sbjct: 12 NNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST-------------- 57
Query: 76 SVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK---QAHVF 132
G V +D+ S E+T + + L K +
Sbjct: 58 --------NGFHVFRYDSLHHVGLS-SGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLI 108
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192
S+ A +A ++ + L ++ TL A+ F P
Sbjct: 109 AASLSARVAYEVI----------SDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDEL 158
Query: 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252
DLD + E +V + K+
Sbjct: 159 PNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTL----------------------DKVANT 196
Query: 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPGGHLVSHERTEEVN 311
+ I +D + + + ++ L G E +
Sbjct: 197 SVPLI--------AFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLR 248
Query: 312 QALIDLIKA 320
+ KA
Sbjct: 249 NFYQSVTKA 257
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (109), Expect = 1e-06
Identities = 27/241 (11%), Positives = 59/241 (24%), Gaps = 19/241 (7%)
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALM-DHLGWKQAHVFGHSMGAMIACK 143
I + +A I + V G+S GA +A +
Sbjct: 49 SIPTYGLQCTRAAPLD--------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFE 100
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA-AVDLDTHYSQ 202
+ + + + N + T S + E A+
Sbjct: 101 MCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFT 160
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-------MHKMTQKDIQ 255
+ V + +E V ++S+ G D Q + + Q +
Sbjct: 161 DMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPK 220
Query: 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH--LVSHERTEEVNQA 313
++ + L++ + + G H L+ E +
Sbjct: 221 AKYYGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESIISI 280
Query: 314 L 314
+
Sbjct: 281 I 281
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 43.4 bits (101), Expect = 1e-05
Identities = 18/159 (11%), Positives = 36/159 (22%), Gaps = 33/159 (20%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+++ G+ G + L G
Sbjct: 5 VVMVHGIGGASFNFAGIKSYLV----------------------SQGWSRDKLYAVDFWD 42
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLA 156
++++ V ++D G K+ + HSMG + +V ++
Sbjct: 43 ---KTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 99
Query: 157 LLNVTGGGF------QCCPKLDLQTLSIAIRFFRAKTPE 189
L P + SI
Sbjct: 100 TLGGANRLTTGKALPGTDPNQKILYTSIYSSADMIVMNY 138
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} Length = 376 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Score = 44.0 bits (103), Expect = 1e-05
Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 20/152 (13%)
Query: 23 NGIKIFYRTYGR---GPTKVILI-TGLAGTHDA--WGPQLKGLAGTDKPNDDDET--ILQ 74
+ + Y+++GR +++ L + W P L G + D I
Sbjct: 27 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWP---TLFGQGRAFDTSRYFIICL 83
Query: 75 DSVESGDGGAG---IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-WKQAH 130
+ + S G AG + A R G + P T + + ++D LG + A
Sbjct: 84 NYLGSPFGSAGPCSPDPDAEGQRPYG-AKFPR----TTIRDDVRIHRQVLDRLGVRQIAA 138
Query: 131 VFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162
V G SMG M + A PE V + + +
Sbjct: 139 VVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 170
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 5e-05
Identities = 24/141 (17%), Positives = 40/141 (28%), Gaps = 28/141 (19%)
Query: 23 NGIKIFYRTYGRGPTK----VILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDS 76
G +F+R G + V+L+ G+ + + W L LA
Sbjct: 14 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLA---------------- 57
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM 136
AG A D G+G S + A++D L V S+
Sbjct: 58 ------QAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSL 111
Query: 137 GAMIACKLAAMVPERVLSLAL 157
M + ++
Sbjct: 112 SGMYSLPFLTAPGSQLPGFVP 132
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 41.6 bits (97), Expect = 8e-05
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 5/68 (7%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
G C + V T+ M + AL G + V S G ++A
Sbjct: 59 LGYTPCWISPPPFMLNDTQV-----NTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQW 113
Query: 144 LAAMVPER 151
P
Sbjct: 114 GLTFFPSI 121
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 40.2 bits (93), Expect = 2e-04
Identities = 27/241 (11%), Positives = 52/241 (21%), Gaps = 48/241 (19%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTT--KIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+ A G G + + A++ G + GHS GA++
Sbjct: 86 QEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGHSGGALL 145
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A +LA + P VD
Sbjct: 146 AHELAFRLERA--------------------------------HGAPPAGIVLVDPYPPG 173
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
QE +E + + +
Sbjct: 174 HQEPIEVWSRQLGEGLFAGEL-------------EPMSDARLLAMGRYARFLAGPRPGRS 220
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL-VSHERTEEVNQALIDLIK 319
V ++ + + D+PG H + + V +A++ +
Sbjct: 221 SAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLD 280
Query: 320 A 320
A
Sbjct: 281 A 281
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 37.0 bits (84), Expect = 0.001
Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 219 YQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQIC 278
Q + + D Q I + +VI + D I
Sbjct: 83 LQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQIVPFS 142
Query: 279 YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+++ LA+++ A + ++ GH + E + + D++
Sbjct: 143 FSKDLAQQID--AALYEVQHGGHFLEDEGFTSLPI-VYDVLT 181
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 37.4 bits (86), Expect = 0.001
Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGWKQAHVFGHSMGAMIA 141
V A G +A A++ G K V GHS GA++A
Sbjct: 68 RGIAPVRAVPQPGYEEGEPLPSSMAA----VAAVQADAVIRTQGDKPFVVAGHSAGALMA 123
Query: 142 CKLAAMVPERVLSLALL 158
LA + +R +
Sbjct: 124 YALATELLDRGHPPRGV 140
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 36.6 bits (83), Expect = 0.003
Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 41/209 (19%)
Query: 113 MAKDVIALM-DHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171
L+ +FG+S G +A + A + + + +
Sbjct: 56 RLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRI------------- 102
Query: 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM 231
+ +K+ DLD + +E + + L E VK
Sbjct: 103 -----------IMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKT 151
Query: 232 QSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVA 291
+ Y + + + K + ++ D + E
Sbjct: 152 HAFYSYYVNLISTGQVKAD-------------IDLLTSGADF-DIPEWLASWEEATTGAY 197
Query: 292 RMIDLPGGH--LVSHERTEEVNQALIDLI 318
RM G H ++ E + L++ +
Sbjct: 198 RMKRGFGTHAEMLQGETLDRNAGILLEFL 226
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 351 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.98 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.98 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.96 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.96 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.95 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.94 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.94 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.93 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.93 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.91 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.91 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.91 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.91 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.9 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.89 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.88 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.88 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.87 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.84 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.84 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.82 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.81 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.79 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.79 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.79 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.78 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.78 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.77 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.76 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.76 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.74 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.73 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.72 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.71 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.67 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.66 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.6 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.55 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.4 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.39 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.39 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.34 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.33 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.27 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.25 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.23 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.18 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.17 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.17 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.16 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.07 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.04 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.02 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.99 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.99 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.93 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.84 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.55 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.53 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.51 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.51 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.5 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.41 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.39 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.23 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 96.91 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 96.9 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 96.79 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 96.63 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.63 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.52 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.45 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.45 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 95.88 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 95.75 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.74 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 95.73 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.67 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.61 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.53 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 90.71 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 89.71 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=9.6e-37 Score=262.30 Aligned_cols=273 Identities=21% Similarity=0.284 Sum_probs=180.9
Q ss_pred ccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchH-HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
++.+.++|++|+|.+.|+ +.|+|||+||++++...|. .+.+.|.+ +||+|+++|+|
T Consensus 2 e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~ 59 (297)
T d1q0ra_ 2 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLAD----------------------GGLHVIRYDHR 59 (297)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHT----------------------TTCEEEEECCT
T ss_pred CeEEEECCEEEEEEEecCCCCCEEEEECCCCcChhHHHHHHHHHHHh----------------------CCCEEEEEeCC
Confidence 356788999999999996 5678999999999998885 46777876 69999999999
Q ss_pred CCCCCCCCCC-CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 95 GMGRSSVPVK-KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 95 G~G~S~~~~~-~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
|||.|+.... ...++++++++|+..++++++.++++++||||||.+++.+|..+|++|+++|++++...... ..
T Consensus 60 G~G~S~~~~~~~~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~-----~~ 134 (297)
T d1q0ra_ 60 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDID-----FD 134 (297)
T ss_dssp TSTTSCCCCTTTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCC-----HH
T ss_pred CCcccccccccccccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEcccccccc-----ch
Confidence 9999975442 34579999999999999999999999999999999999999999999999999987642211 00
Q ss_pred hhhHHHHhhcccC------CHHH---HhhcCccccccH----HHH---HHhhcCC-chhhhhHHHHHh-hhhhccCCCCC
Q 018750 174 QTLSIAIRFFRAK------TPEK---RAAVDLDTHYSQ----EYL---EEYVGSS-TRRAILYQEYVK-GISATGMQSNY 235 (351)
Q Consensus 174 ~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~----~~~---~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 235 (351)
............. .... ............ ... ....... .........+.. ...........
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (297)
T d1q0ra_ 135 ANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAE 214 (297)
T ss_dssp HHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSC
T ss_pred hhhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchh
Confidence 0000000000000 0000 000000000000 000 0000100 001111111111 11110000000
Q ss_pred CcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHH
Q 018750 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i 314 (351)
.+ ..........+....++++++||++|+|++|.++|++.++.+.+.+ |+++++++++ ||+++.|+|+++++.|
T Consensus 215 ~~----~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i 289 (297)
T d1q0ra_ 215 PY----AHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVI 289 (297)
T ss_dssp CC----GGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCSSCCGGGHHHHHHHH
T ss_pred hh----hhhhhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCcchhhCHHHHHHHH
Confidence 00 0000011223344577899999999999999999999999999876 9999999998 9999999999999999
Q ss_pred HHHHHhc
Q 018750 315 IDLIKAS 321 (351)
Q Consensus 315 ~~fl~~~ 321 (351)
.+||++.
T Consensus 290 ~~~l~~~ 296 (297)
T d1q0ra_ 290 LAHTRSA 296 (297)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9999864
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=4.7e-37 Score=263.21 Aligned_cols=274 Identities=16% Similarity=0.182 Sum_probs=183.4
Q ss_pred CccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
+.++++++|.+|+|.+.|+ ..|+|||+||++++...|..+++.|.+ +|+|+++|+|
T Consensus 8 ~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~d~~ 64 (291)
T d1bn7a_ 8 DPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-----------------------SHRCIAPDLI 64 (291)
T ss_dssp CCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGGGGTTTHHHHTT-----------------------TSCEEEECCT
T ss_pred CCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEEeCC
Confidence 4678999999999999995 446799999999999999999999986 9999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|||.|+.+. ..++.+++++|+.+++++++.++++++||||||.+++.++.++|+++++++++++....... .... .
T Consensus 65 G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~-~~~~-~ 140 (291)
T d1bn7a_ 65 GMGKSDKPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTW-DEWP-E 140 (291)
T ss_dssp TSTTSCCCS--CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSG-GGSC-H
T ss_pred CCccccccc--cccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccc-hhhh-h
Confidence 999998765 47789999999999999999999999999999999999999999999999999876422111 0000 0
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc-------
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH------- 247 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 247 (351)
.................... ....+....+........ .......+.+........ .............
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 216 (291)
T d1bn7a_ 141 FARETFQAFRTADVGRELII-DQNAFIEGVLPKCVVRPL-TEVEMDHYREPFLKPVDR--EPLWRFPNEIPIAGEPANIV 216 (291)
T ss_dssp HHHHHHHHHTSTTHHHHHHT-TSCHHHHTHHHHTCSSCC-CHHHHHHHHGGGSSGGGG--HHHHHHHHHSCBTTBSHHHH
T ss_pred hhhhHHHHHhhhhhHHHhhh-hhhhhHHhhhhhhccccc-hHHHHHHHHHHhcchhhh--HHHHHHHHHhhhhhhhchhh
Confidence 11111111111111111000 000011111111111111 011111111110000000 0000000000000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.........++++++|+++|+|++|.++|++.++++.+.+ ++++++++++ ||+++.|+|+++++.|.+||+..
T Consensus 217 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 217 ALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 0112334557889999999999999999999999999986 9999999987 99999999999999999999864
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=3.4e-37 Score=261.04 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=174.1
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCcc---chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
++++++||.+++|.+.|+|+ +|||+||++++.. .|..+++.|++ +|+|+++|+
T Consensus 4 ~~~~~~dg~~l~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~D~ 59 (268)
T d1j1ia_ 4 ERFVNAGGVETRYLEAGKGQ-PVILIHGGGAGAESEGNWRNVIPILAR-----------------------HYRVIAMDM 59 (268)
T ss_dssp EEEEEETTEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECC
T ss_pred CeEEEECCEEEEEEEEcCCC-eEEEECCCCCCccHHHHHHHHHHHHhc-----------------------CCEEEEEcc
Confidence 46788999999999999986 5999999987654 47788888876 999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||||.|+.+. ..++.+++++++.++++.++. ++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 60 ~G~G~S~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~- 136 (268)
T d1j1ia_ 60 LGFGKTAKPD--IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDL- 136 (268)
T ss_dssp TTSTTSCCCS--SCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred cccccccCCc--cccccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhh-
Confidence 9999998765 467899999999999999987 479999999999999999999999999999999864322111100
Q ss_pred hhhhHHHHhhcccCCHHH-----HhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 173 LQTLSIAIRFFRAKTPEK-----RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
...... ...... ....................... .......+.. ........
T Consensus 137 ----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------~~~~~~~~ 194 (268)
T d1j1ia_ 137 ----RPIINY--DFTREGMVHLVKALTNDGFKIDDAMINSRYTYAT-DEATRKAYVA---------------TMQWIREQ 194 (268)
T ss_dssp ---------C--CSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH-SHHHHHHHHH---------------HHHHHHHH
T ss_pred ----hhhhhh--hhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhh-hhhhhhhhhh---------------hhhhhhcc
Confidence 000000 000000 00000000000100000000000 0000000000 00000000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.......+.++++++|+++|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+||++
T Consensus 195 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 195 GGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp TSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 1111223567889999999999999999999999999976 9999999998 9999999999999999999975
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.6e-37 Score=262.15 Aligned_cols=257 Identities=22% Similarity=0.312 Sum_probs=174.8
Q ss_pred cccccCCeEEEEEEcCCCCCeEEEEecCCCCccc---hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDA---WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
++++++|.+++|.+.|+|+ +|||+||++++... |..+++.|.+ +|+|+++|+|
T Consensus 6 ~~i~~~G~~~~Y~~~G~G~-pvvllHG~~~~~~~~~~~~~~~~~l~~-----------------------~~~vi~~Dl~ 61 (271)
T d1uk8a_ 6 KSILAAGVLTNYHDVGEGQ-PVILIHGSGPGVSAYANWRLTIPALSK-----------------------FYRVIAPDMV 61 (271)
T ss_dssp EEEEETTEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECCT
T ss_pred CEEEECCEEEEEEEEeeCC-eEEEECCCCCCccHHHHHHHHHHHHhC-----------------------CCEEEEEeCC
Confidence 4788999999999999986 59999999877654 5567888876 9999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
|||.|+.+.. ..++.+++++++..+++.++.++++|+||||||.+++.+|.++|++++++|++++....... ..
T Consensus 62 G~G~S~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~-----~~ 135 (271)
T d1uk8a_ 62 GFGFTDRPEN-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV-----TE 135 (271)
T ss_dssp TSTTSCCCTT-CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCC-----CH
T ss_pred CCCCcccccc-ccccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccc-----hh
Confidence 9999987654 46678999999999999999999999999999999999999999999999999886432111 11
Q ss_pred hhHHHHhhcccCCHHHHh---hcCc-cccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 175 TLSIAIRFFRAKTPEKRA---AVDL-DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
.......... ....... .... ................. .. .+.+.+.... .......... .
T Consensus 136 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~---~~~~~~~~~~------~ 200 (271)
T d1uk8a_ 136 GLNAVWGYTP-SIENMRNLLDIFAYDRSLVTDELARLRYEASI-QP----GFQESFSSMF---PEPRQRWIDA------L 200 (271)
T ss_dssp HHHHHHTCCS-CHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHT-ST----THHHHHHTTS---CSSTHHHHHH------H
T ss_pred hhhhhhhccc-hhHHHHHHHHHHhhhcccchhHHHHHHHhhhh-ch----hHHHHHHhhc---chhhhhhhhh------c
Confidence 1111111100 0000000 0000 00000000000000000 00 0000000000 0000000000 0
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
....+.+.++++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 201 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 201 ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp CCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred cccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhC-CCCEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 1123567889999999999999999999999999986 8999999998 9999999999999999999986
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=8.4e-37 Score=261.72 Aligned_cols=278 Identities=19% Similarity=0.201 Sum_probs=175.7
Q ss_pred CCccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 15 ~~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.....++++|.+|+|.+.|+|+ +|||+||+++++..|..+++.|.+ +|+|+++|+|
T Consensus 8 ~~~~~~~~~~~~l~y~~~G~gp-~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~ 63 (293)
T d1ehya_ 8 FKHYEVQLPDVKIHYVREGAGP-TLLLLHGWPGFWWEWSKVIGPLAE-----------------------HYDVIVPDLR 63 (293)
T ss_dssp SCEEEEECSSCEEEEEEEECSS-EEEEECCSSCCGGGGHHHHHHHHT-----------------------TSEEEEECCT
T ss_pred CcceEEEECCEEEEEEEECCCC-eEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEecCC
Confidence 3456788899999999999875 699999999999999999999987 9999999999
Q ss_pred CCCCCCCCCCC--CccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 95 GMGRSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 95 G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
|||.|+..... ..++++++++|+.+++++++.++++++||||||.+|+.+|.++|+++.++|++++..+.........
T Consensus 64 G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 143 (293)
T d1ehya_ 64 GFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGL 143 (293)
T ss_dssp TSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-------
T ss_pred cccCCccccccccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhh
Confidence 99999865432 3567899999999999999999999999999999999999999999999999998754322111000
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc----C-CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG----S-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
............. ..................+..++. . ..........+......... ..............
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 220 (293)
T d1ehya_ 144 GHVHESWYSQFHQ-LDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDN--IHGGFNYYRANIRP 220 (293)
T ss_dssp ----CCHHHHHTT-CHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTH--HHHHHHHHHHHSSS
T ss_pred hhhhhhhhhhhhc-cchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchh--hhhhhhhhhhcccc
Confidence 0000000000000 000000000011111111111111 0 01111111111111100000 00000000000000
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
............+++|+++|+|++|.+++.+...++.+.+.++++++++++ ||++++|+|+++++.|.+|++
T Consensus 221 ~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 221 DAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp SCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred chhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 000000112345789999999999999998777665555568999999998 999999999999999999974
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-37 Score=269.92 Aligned_cols=275 Identities=20% Similarity=0.287 Sum_probs=180.5
Q ss_pred cccccc-CCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 17 DAALND-NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 17 ~~~~~~-~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
..++++ +|++|+|.+.|+| |+|||+||+++++..|..+++.|.+ +||+|+++|+||
T Consensus 13 ~~~v~~~~g~~i~y~~~G~g-p~vlllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G 69 (322)
T d1zd3a2 13 HGYVTVKPRVRLHFVELGSG-PAVCLCHGFPESWYSWRYQIPALAQ----------------------AGYRVLAMDMKG 69 (322)
T ss_dssp EEEEEEETTEEEEEEEECCS-SEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEEECTT
T ss_pred eeEEEECCCCEEEEEEEcCC-CeEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEecccc
Confidence 345665 7999999999987 5799999999999999999999987 699999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh-
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ- 174 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~- 174 (351)
||.|+.+.....++.+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|+++++.............
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 149 (322)
T d1zd3a2 70 YGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESI 149 (322)
T ss_dssp STTSCCCSCGGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHH
T ss_pred ccccccccccccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhh
Confidence 9999887665678999999999999999999999999999999999999999999999999998754321111100000
Q ss_pred ---hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc----------------------------hhhhhHHHHH
Q 018750 175 ---TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST----------------------------RRAILYQEYV 223 (351)
Q Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~ 223 (351)
.................... ......+........ ........+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (322)
T d1zd3a2 150 KANPVFDYQLYFQEPGVAEAELE----QNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYV 225 (322)
T ss_dssp HTCGGGHHHHHTTSTTHHHHHHH----HTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHH
T ss_pred hccchhhhHHhhhccchhhhhhh----hhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHH
Confidence 00000000000000000000 000000000000000 0001111111
Q ss_pred hhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccc
Q 018750 224 KGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302 (351)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~ 302 (351)
+.+................. ...........++++||++|+|++|.+++++..+.+.+.+ ++.+++++++ ||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~ 300 (322)
T d1zd3a2 226 QQFKKSGFRGPLNWYRNMER----NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWT 300 (322)
T ss_dssp HHHHHHTTHHHHHTTSCHHH----HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCH
T ss_pred HHHhhccccccccccccccc----ccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCch
Confidence 11111100000000000000 0001112334678999999999999999999988888865 8999999998 9999
Q ss_pred cccChHHHHHHHHHHHHhcCC
Q 018750 303 SHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 303 ~~~~p~~~~~~i~~fl~~~~~ 323 (351)
++|+|++|++.|.+||++..+
T Consensus 301 ~~e~p~~v~~~i~~FL~~~~~ 321 (322)
T d1zd3a2 301 QMDKPTEVNQILIKWLDSDAR 321 (322)
T ss_dssp HHHSHHHHHHHHHHHHHHHTC
T ss_pred HHhCHHHHHHHHHHHHhhcCC
Confidence 999999999999999988653
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.4e-36 Score=256.51 Aligned_cols=263 Identities=22% Similarity=0.303 Sum_probs=170.2
Q ss_pred cCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 22 ~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
.||.+|+|.+.|+|+ +|||+||+++++..|..+++.|.+ +||+|+++|+||||.|+.
T Consensus 6 ~dG~~l~y~~~G~g~-~ivlvHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~S~~ 62 (274)
T d1a8qa_ 6 RDGVEIFYKDWGQGR-PVVFIHGWPLNGDAWQDQLKAVVD----------------------AGYRGIAHDRRGHGHSTP 62 (274)
T ss_dssp TTSCEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTSCC
T ss_pred cCCCEEEEEEECCCC-eEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEeCCCCccccc
Confidence 378999999999875 599999999999999999999976 599999999999999987
Q ss_pred CCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHh-CCcccceEEEeccCCCCCCCCCccchhhhHHHH
Q 018750 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
+. ..++..++++|+.++++.++.++++++||||||.+++.++.+ .|++|++++++++....................
T Consensus 63 ~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (274)
T d1a8qa_ 63 VW--DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF 140 (274)
T ss_dssp CS--SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH
T ss_pred cc--ccccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHH
Confidence 66 467899999999999999999999999999999999887655 589999999999765433222211111111111
Q ss_pred hhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC-CCcchhhhhhhcccCCHHHHHHhhc
Q 018750 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN-YGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
..+........ ..........+.................+........ ......... + ...+..+.+++
T Consensus 141 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~ 210 (274)
T d1a8qa_ 141 DALKNGVLTER------SQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDA-F---GYTDFTEDLKK 210 (274)
T ss_dssp HHHHHHHHHHH------HHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHH-H---HHCCCHHHHTT
T ss_pred HHHHhhhhhhh------HHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHH-h---hccchHHHHHh
Confidence 00000000000 0000111111111111100000000000000000000 000000000 0 01122356788
Q ss_pred cCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-Cccccc--cChHHHHHHHHHHHHh
Q 018750 260 AGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSH--ERTEEVNQALIDLIKA 320 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~--~~p~~~~~~i~~fl~~ 320 (351)
+++|+++|+|++|.+++.+.. +.+.+. .++++++++++ ||++++ ++|++|++.|.+||++
T Consensus 211 i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 211 FDIPTLVVHGDDDQVVPIDATGRKSAQI-IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHH-STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred ccceeeeeccCCCCCcCHHHHHHHHHHh-CCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 999999999999999998665 555555 59999999998 998876 5799999999999974
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=4.5e-36 Score=256.36 Aligned_cols=259 Identities=21% Similarity=0.300 Sum_probs=173.9
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHH---hcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKG---LAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 99 (351)
++.+|+|.+.|+|+ +|||+||++++...|..+... +.+ +||+|+++|+||||.|
T Consensus 18 ~~~~i~y~~~G~G~-~ivllHG~~~~~~~~~~~~~~l~~~~~----------------------~g~~v~~~D~~G~G~S 74 (283)
T d2rhwa1 18 SDFNIHYNEAGNGE-TVIMLHGGGPGAGGWSNYYRNVGPFVD----------------------AGYRVILKDSPGFNKS 74 (283)
T ss_dssp EEEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred CCEEEEEEEEcCCC-eEEEECCCCCChhHHHHHHHHHHHHHH----------------------CCCEEEEEeCCCCccc
Confidence 46789999999875 699999999999888765433 223 4999999999999999
Q ss_pred CCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
..+.. ..++...+++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++...................
T Consensus 75 ~~~~~-~~~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T d2rhwa1 75 DAVVM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLL 153 (283)
T ss_dssp CCCCC-SSCHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHH
T ss_pred ccccc-cccccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHH
Confidence 87654 35677788999999999999999999999999999999999999999999999986543222222222222222
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCc-hhhhhHHHHHhhhhhccCCCCCCcchhhhhh-hcccCCHHHHHHh
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHAC-WMHKMTQKDIQTI 257 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 257 (351)
............. ..+........ ............+..... ......... .......+....+
T Consensus 154 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 219 (283)
T d2rhwa1 154 FKLYAEPSYETLK----------QMLQVFLYDQSLITEELLQGRWEAIQRQPE----HLKNFLISAQKAPLSTWDVTARL 219 (283)
T ss_dssp HHHHHSCCHHHHH----------HHHHHHCSCGGGCCHHHHHHHHHHHHHCHH----HHHHHHHHHHHSCGGGGCCGGGG
T ss_pred HHHhhhhhhhhHH----------HHHHHhhcccccCcHHHHHHHHHHhhhhhh----hhhhhhhhhhhhhccccchHHHH
Confidence 2222222111110 11111111100 000011111100000000 000000000 0000111223457
Q ss_pred hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.++++|+++|+|++|.+++++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 220 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 220 GEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp GGCCSCEEEEEETTCSSSCTHHHHHHHHHS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred hhCCCCEEEEEeCCCCCcCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 789999999999999999999999999986 8999999998 9999999999999999999986
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.2e-36 Score=257.02 Aligned_cols=262 Identities=22% Similarity=0.301 Sum_probs=168.9
Q ss_pred cccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCC
Q 018750 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 99 (351)
.+.++++|+|.+.|+|+ +|||+||++++...|..+++.|.+ +||+|+++|+||||.|
T Consensus 8 ~~~~~v~i~y~~~G~G~-~ivllHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~S 64 (277)
T d1brta_ 8 ENSTSIDLYYEDHGTGQ-PVVLIHGFPLSGHSWERQSAALLD----------------------AGYRVITYDRRGFGQS 64 (277)
T ss_dssp ETTEEEEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred CcCCcEEEEEEEEccCC-eEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeCCCCCcc
Confidence 34457899999999876 599999999999999999998876 5999999999999999
Q ss_pred CCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhh-HHHHHHHHhCCcccceEEEeccCCCCCCCCCccc-----h
Q 018750 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD-----L 173 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-----~ 173 (351)
+... ..++++++++|+.++++.++.++++++|||||| .++..++..+|++|+++|++++..+......... .
T Consensus 65 ~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 142 (277)
T d1brta_ 65 SQPT--TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ 142 (277)
T ss_dssp CCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCH
T ss_pred cccc--cccchhhhhhhhhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhh
Confidence 8655 467999999999999999999999999999996 5566678888999999999997653321111110 0
Q ss_pred hhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHH
Q 018750 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
...................... .. ............... ............. +...... ......+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~ 209 (277)
T d1brta_ 143 EFFDGIVAAVKADRYAFYTGFF-ND---FYNLDENLGTRISEE-AVRNSWNTAASGG------FFAAAAA--PTTWYTDF 209 (277)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHH-HH---HTTHHHHBTTTBCHH-HHHHHHHHHHHSC------HHHHHHG--GGGTTCCC
T ss_pred hHHHHHHHhhhccchhhhhhcc-cc---ccccchhhhhhhhHH-Hhhhhhcccchhh------hhhhhhh--hhhhhhhH
Confidence 0000000000000000000000 00 000000000110000 0011100000000 0000000 00011122
Q ss_pred HHHhhccCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 254 IQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 254 ~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
...+.++++|+++|+|++|.+++++.. +.+.+. .++++++++++ ||++++|+|++|++.|.+||++
T Consensus 210 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 210 RADIPRIDVPALILHGTGDRTLPIENTARVFHKA-LPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp TTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHH-CTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHhcCccceeEeecCCCCcCHHHHHHHHHHh-CCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 345778899999999999999998764 555555 49999999998 9999999999999999999974
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2.8e-36 Score=257.50 Aligned_cols=260 Identities=21% Similarity=0.292 Sum_probs=174.6
Q ss_pred cccccCCeEEEEEEcCC-CCCeEEEEecCCCCcc---chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
..+..++.+++|...|+ +.|+|||+||++++.. .|..+++.|++ +|+|+++|+
T Consensus 7 ~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~ 63 (281)
T d1c4xa_ 7 KRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-----------------------NFFVVAPDL 63 (281)
T ss_dssp EEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-----------------------TSEEEEECC
T ss_pred EEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhC-----------------------CCEEEEEeC
Confidence 45677889999999996 5678999999987654 47888999987 999999999
Q ss_pred CCCCCCCCCCCCC---ccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 94 RGMGRSSVPVKKT---EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 94 ~G~G~S~~~~~~~---~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
||||.|+...... ..+.+++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++........
T Consensus 64 ~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~-- 141 (281)
T d1c4xa_ 64 IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR-- 141 (281)
T ss_dssp TTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC--
T ss_pred CCCccccccccccccchhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccc--
Confidence 9999998765322 24567889999999999999999999999999999999999999999999999864322111
Q ss_pred cchhhhHHHHhhcccCCHHHHh----hcCcccc-c--cHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhh
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRA----AVDLDTH-Y--SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (351)
.................... ....... . ............ ............... ...
T Consensus 142 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~ 206 (281)
T d1c4xa_ 142 --PPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA--NDPEVRRIQEVMFES-----------MKA 206 (281)
T ss_dssp --CHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH--HCHHHHHHHHHHHHH-----------HSS
T ss_pred --hhHHHHHHHhhhhcccchhhhhhhhhcccccccchhhhHHHHHhhhc--ccchhhhhhhhhhhH-----------Hhh
Confidence 11122122222111111100 0000000 0 000000000000 000000000000000 000
Q ss_pred hhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
... ........+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 207 ~~~--~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 207 GME--SLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp CCG--GGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred hhh--hhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 000 001123457889999999999999999999999999986 8999999998 9999999999999999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.9e-37 Score=264.90 Aligned_cols=265 Identities=19% Similarity=0.246 Sum_probs=175.2
Q ss_pred ccccccCCeEEEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 17 DAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
+.+++++|.+|+|...|+ ++|+|||+||+++++..|...+..+.+ +||+|+++|+|
T Consensus 4 ~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~~~~~~~----------------------~~~~vi~~D~~ 61 (290)
T d1mtza_ 4 ENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK----------------------EGITVLFYDQF 61 (290)
T ss_dssp EEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGG----------------------GTEEEEEECCT
T ss_pred cCeEEECCEEEEEEEcCCCCCCCeEEEECCCCCchHHHHHHHHHHHH----------------------CCCEEEEEeCC
Confidence 357889999999999996 557899999998888888777777766 69999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccch
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
|||.|+.+.. ..++++++++|+.++++++ +.++++++||||||.+++.+|.++|++|+++|++++... . .
T Consensus 62 G~G~S~~~~~-~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-------~-~ 132 (290)
T d1mtza_ 62 GCGRSEEPDQ-SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS-------V-P 132 (290)
T ss_dssp TSTTSCCCCG-GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB-------H-H
T ss_pred CCcccccccc-ccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccC-------c-c
Confidence 9999987654 5789999999999999987 788999999999999999999999999999999987531 1 1
Q ss_pred hhhHHHHhhcccCCHHHH-------hh-cCccccc---cHHHHHHhh-cCCchhhhhHHHHHhhhh-----hccCCCCCC
Q 018750 174 QTLSIAIRFFRAKTPEKR-------AA-VDLDTHY---SQEYLEEYV-GSSTRRAILYQEYVKGIS-----ATGMQSNYG 236 (351)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 236 (351)
.................. .. ......+ ......... .................. .........
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (290)
T d1mtza_ 133 LTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFT 212 (290)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTB
T ss_pred cchhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHh
Confidence 111111111111110000 00 0000000 000111111 111111111111000000 000000000
Q ss_pred cchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHH
Q 018750 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315 (351)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~ 315 (351)
.... ....+....++++++|+++|+|++|.++| +.++.+.+.+ ++++++++++ ||++++|+|+++++.|.
T Consensus 213 ~~~~-------~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 283 (290)
T d1mtza_ 213 ITGT-------IKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLS 283 (290)
T ss_dssp CCST-------TTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred Hhhh-------hhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 0000 01112234568889999999999999775 6678888876 8999999998 99999999999999999
Q ss_pred HHHHhc
Q 018750 316 DLIKAS 321 (351)
Q Consensus 316 ~fl~~~ 321 (351)
+||.++
T Consensus 284 ~FL~~h 289 (290)
T d1mtza_ 284 DFILKH 289 (290)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 999874
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=3e-36 Score=256.55 Aligned_cols=262 Identities=24% Similarity=0.312 Sum_probs=170.2
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 102 (351)
.+++|+|.+.|+|+ +|||+||+++++..|..++..|.+ +||+|+++|+||||.|+.+
T Consensus 11 ~~v~i~y~~~G~g~-~illlHG~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G~S~~~ 67 (279)
T d1hkha_ 11 TPIELYYEDQGSGQ-PVVLIHGYPLDGHSWERQTRELLA----------------------QGYRVITYDRRGFGGSSKV 67 (279)
T ss_dssp EEEEEEEEEESSSE-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTEEEEEECCTTSTTSCCC
T ss_pred CeEEEEEEEEccCC-eEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEechhhCCcccc
Confidence 35699999999875 599999999999999999988865 5999999999999999876
Q ss_pred CCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhh-HHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHh
Q 018750 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (351)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
. ..++++++++|+.+++++++.++++|+|||||| .++..+|..+|++|.++|++++..+..................
T Consensus 68 ~--~~~~~~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 145 (279)
T d1hkha_ 68 N--TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFD 145 (279)
T ss_dssp S--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHH
T ss_pred c--cccchhhhhhhhhhhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHH
Confidence 5 468999999999999999999999999999996 5666678888999999999987643322111111110010000
Q ss_pred ----hcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh
Q 018750 182 ----FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (351)
Q Consensus 182 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (351)
............. ................. ............... ..... ....+. .......+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~-~~~~~~-~~~~~~~~~~ 215 (279)
T d1hkha_ 146 GIEAAAKGDRFAWFTDF----YKNFYNLDENLGSRISE-QAVTGSWNVAIGSAP---VAAYA-VVPAWI-EDFRSDVEAV 215 (279)
T ss_dssp HHHHHHHHCHHHHHHHH----HHHHHTHHHHBTTTBCH-HHHHHHHHHHHTSCT---THHHH-THHHHT-CBCHHHHHHH
T ss_pred HHHHhhhhhhhhhhhhh----hhhhcccchhhhhhhhh-hhhhhhhhhhcccch---hhhhh-hhhhhh-cccccchhhh
Confidence 0000000000000 00000000111111111 111111111100000 00000 000111 1123445677
Q ss_pred hccCccEEEEeecCCccCCHH-HHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 258 RSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
+.+++|+++|+|++|.+++.+ ..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 216 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 216 RAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHCCCEEEEEETTCSSSCTTTTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cccCCceEEEEcCCCCccCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 888999999999999999865 456677765 8999999998 9999999999999999999974
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.5e-36 Score=253.38 Aligned_cols=265 Identities=22% Similarity=0.294 Sum_probs=177.3
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
++|++.||.+|+|.+.|+|+ +|||+||++++...|..+++.|.+ +||+|+++|+|||
T Consensus 1 s~f~~~dG~~l~y~~~G~g~-~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~ 57 (271)
T d1va4a_ 1 STFVAKDGTQIYFKDWGSGK-PVLFSHGWLLDADMWEYQMEYLSS----------------------RGYRTIAFDRRGF 57 (271)
T ss_dssp CEEECTTSCEEEEEEESSSS-EEEEECCTTCCGGGGHHHHHHHHT----------------------TTCEEEEECCTTS
T ss_pred CEEEeECCeEEEEEEEcCCC-eEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEecccc
Confidence 46889999999999999886 599999999999999999999987 6999999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHH-HHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC-KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~-~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
|.|+.+. ..++++++++++.++++.++.++++++|||+||.+++ .+|..+|+++.+++++++........+......
T Consensus 58 G~S~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~ 135 (271)
T d1va4a_ 58 GRSDQPW--TGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGV 135 (271)
T ss_dssp TTSCCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSB
T ss_pred ccccccc--cccccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhh
Confidence 9998765 4678999999999999999999999999999887655 557778999999999998754433222221111
Q ss_pred hHHHH-hhcccCCHHHHhhcCccccccHHHHHHhhcC---CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCH
Q 018750 176 LSIAI-RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS---STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (351)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
..... ......... . ......+....... ................... ........... ...
T Consensus 136 ~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~ 201 (271)
T d1va4a_ 136 PLDVFARFKTELLKD-R------AQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS---LKATVDCVTAF----AET 201 (271)
T ss_dssp CHHHHHHHHHHHHHH-H------HHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSC---HHHHHHHHHHH----HHC
T ss_pred hhhHHHHHHHHhhhh-h------hhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhh---hhhhhhccccc----chh
Confidence 11000 000000000 0 00000000000000 0000000000000000000 00000000000 011
Q ss_pred HHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 252 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
+....++++++|+++|+|++|.++|++...++.+.+.++++++++++ ||++++|+|+++++.|.+||++
T Consensus 202 ~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 202 DFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp CCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred hhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 22356788899999999999999998888777766668999999998 9999999999999999999974
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=3.6e-36 Score=255.14 Aligned_cols=265 Identities=21% Similarity=0.262 Sum_probs=174.6
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
++|.+.||.+|+|.+.|+|+ +|||+||++++...|..++..|.+ +||+|+++|+|||
T Consensus 1 ~~f~~~dG~~i~y~~~G~g~-pvvllHG~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~ 57 (273)
T d1a8sa_ 1 TTFTTRDGTQIYYKDWGSGQ-PIVFSHGWPLNADSWESQMIFLAA----------------------QGYRVIAHDRRGH 57 (273)
T ss_dssp CEEECTTSCEEEEEEESCSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTS
T ss_pred CEEEeeCCcEEEEEEECCCC-eEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEechhc
Confidence 36788899999999999876 599999999999999999999976 5999999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHH-HHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~-~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
|.|+.+. ..++++++++|+.+++++++.++.+++|||+||.+++. ++..+|++|.+++++++...............
T Consensus 58 G~S~~~~--~~~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~ 135 (273)
T d1a8sa_ 58 GRSSQPW--SGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGL 135 (273)
T ss_dssp TTSCCCS--SCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSB
T ss_pred Ccccccc--ccccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccc
Confidence 9998765 46899999999999999999999999999998865555 56667999999999987653322111111110
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHh-hcC----CchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEY-VGS----STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
.................. ......... ... ........+........... .......... ..
T Consensus 136 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~ 202 (273)
T d1a8sa_ 136 PMEVFDGIRQASLADRSQ------LYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH---KNAYDCIKAF----SE 202 (273)
T ss_dssp CHHHHHHHHHHHHHHHHH------HHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCH---HHHHHHHHHH----HH
T ss_pred hhhhhhhHHHHHHHHHHH------HHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccch---hhhhhhHHHh----hh
Confidence 000000000000000000 000000000 000 00000001111100000000 0000000000 01
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
.+....++++++|+++|+|++|.++|.+..+.+.+.+.++++++++++ ||++++|+|+++++.|.+||+
T Consensus 203 ~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 203 TDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp CCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred hhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 122356788999999999999999998888888776678999999998 999999999999999999997
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=5.4e-36 Score=259.53 Aligned_cols=270 Identities=14% Similarity=0.134 Sum_probs=176.3
Q ss_pred cccCCeEEEEEEcCC--CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 20 ~~~~g~~l~y~~~g~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
...+|.+++|.+.|+ ++|+|||+||+++++..|..++..|.+ +||+|+++|+||||
T Consensus 29 ~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~~~l~~----------------------~~~~vi~~Dl~G~G 86 (310)
T d1b6ga_ 29 PGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE----------------------SGARVIAPDFFGFG 86 (310)
T ss_dssp TTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHH----------------------TTCEEEEECCTTST
T ss_pred cCCCCEEEEEEEecCCCCCCEEEEECCCCCchHHHHHHHHHhhc----------------------cCceEEEeeecCcc
Confidence 457899999999987 457899999999999999999999987 59999999999999
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhH
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (351)
.|+.+.....++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++....... ......
T Consensus 87 ~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~----~~~~~~ 162 (310)
T d1b6ga_ 87 KSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPV----TQPAFS 162 (310)
T ss_dssp TSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTT----TCTHHH
T ss_pred ccccccccccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcc----cchhHH
Confidence 9997665567899999999999999999999999999999999999999999999999999986432111 111111
Q ss_pred HHHhhcccCCHHHHhhcCcccccc-HHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc------cCC
Q 018750 178 IAIRFFRAKTPEKRAAVDLDTHYS-QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH------KMT 250 (351)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 250 (351)
........................ ........... . ......+...+...... ............. ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (310)
T d1b6ga_ 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTL-T-EAEASAYAAPFPDTSYQ--AGVRKFPKMVAQRDQACIDIST 238 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTC-C-HHHHHHHHTTCSSGGGC--HHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHhhcchhhhhhhhhhhccchhhhhhhhhhccCccc-c-HHHHHHHHhhcchhhhh--hcchhhhhhhhhhhhhhhhhhh
Confidence 110000000000000000000011 11111111100 0 00001111100000000 0000000000000 000
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCC-ceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.........+++|+++++|++|.+++++..+.+.+.+ ++ .+++++++ ||+++.++|+.+++.|.+||++
T Consensus 239 ~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 239 EAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALI-NGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHS-TTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred hhhHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 1112234678999999999999999999999999876 55 47788887 9999999999999999999975
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.1e-35 Score=252.33 Aligned_cols=262 Identities=23% Similarity=0.262 Sum_probs=171.7
Q ss_pred cccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
++.+.||.+|+|..+|+ +.|+|||+||++++...|..++..|.+ +||+|+++|+|||
T Consensus 2 ~i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~ 59 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLS----------------------HGYRVIAHDRRGH 59 (275)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTS
T ss_pred EEEecCCCEEEEEEecCCCCCeEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEecccc
Confidence 35677999999999995 456899999999999999999999976 5999999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEch-hhHHHHHHHHhCCcccceEEEeccCCCCCCCCCcc----
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM-GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL---- 171 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~-Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---- 171 (351)
|.|+.+. ..++++++++|+.++++.++.++++++|||+ ||.++..+|..+|++|+++|++++..+........
T Consensus 60 G~s~~~~--~~~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 137 (275)
T d1a88a_ 60 GRSDQPS--TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGL 137 (275)
T ss_dssp TTSCCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSB
T ss_pred ccccccc--ccccccccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhh
Confidence 9998765 4689999999999999999999999999997 66677778899999999999999764322111111
Q ss_pred chhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhc----CCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcc
Q 018750 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (351)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
..................... ......+.. ...........+........ .......... +
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-- 202 (275)
T d1a88a_ 138 PLEVFDEFRAALAANRAQFYI---------DVPSGPFYGFNREGATVSQGLIDHWWLQGMMGA---ANAHYECIAA-F-- 202 (275)
T ss_dssp CHHHHHHHHHHHHHCHHHHHH---------HHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSC---HHHHHHHHHH-H--
T ss_pred hhhhhhhhhhhhhhhhHHHHH---------hhhhhhhhhcccchhhHHHHHHHHHHHhhcccc---hHHHHHHHHH-h--
Confidence 111111110100000000000 000000000 00000001111110000000 0000000000 0
Q ss_pred cCCHHHHHHhhccCccEEEEeecCCccCCHHHH-HHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
...+..+.+.++++|+++|+|++|.++|.+.. +.+.+. .++++++++++ ||++++|+|+++++.|.+||++
T Consensus 203 -~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 203 -SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAEL-LANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp -HHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred -hhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHh-CCCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 01122356778999999999999999987654 455554 58999999998 9999999999999999999974
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-35 Score=239.86 Aligned_cols=194 Identities=20% Similarity=0.309 Sum_probs=162.3
Q ss_pred CccccccCCeEEEEEEcCC----CCCeEEEEecCCCCccchHH--HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 16 PDAALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
.+.+++++|.+++|+..++ .+|+|||+||++++...|.. +++.|++ +||+|+
T Consensus 7 ~e~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~----------------------~gy~vi 64 (208)
T d1imja_ 7 REGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQ----------------------AGYRAV 64 (208)
T ss_dssp CCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHH----------------------TTCEEE
T ss_pred eEEEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHH----------------------cCCeEE
Confidence 3557889999999998754 45689999999999999976 4678887 699999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
++|+||||.|+.+.....++....++++.++++.++.++++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 65 a~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~------ 138 (208)
T d1imja_ 65 AIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICT------ 138 (208)
T ss_dssp EECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCG------
T ss_pred EeecccccCCCCCCcccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccc------
Confidence 99999999998776545666677788899999999999999999999999999999999999999999987520
Q ss_pred ccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccC
Q 018750 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (351)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
.
T Consensus 139 --~----------------------------------------------------------------------------- 139 (208)
T d1imja_ 139 --D----------------------------------------------------------------------------- 139 (208)
T ss_dssp --G-----------------------------------------------------------------------------
T ss_pred --c-----------------------------------------------------------------------------
Confidence 0
Q ss_pred CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHh
Q 018750 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
......+.++++|+|+|+|++|.++|... +..+.+ ++.++.++++ ||..++++|+++.+.+.+||++
T Consensus 140 -~~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~-~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 140 -KINAANYASVKTPALIVYGDQDPMGQTSF--EHLKQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp -GSCHHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTS-SSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred -ccccccccccccccccccCCcCcCCcHHH--HHHHhC-CCCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 00012356788999999999999988653 344544 8999999998 9999999999999999999985
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.1e-35 Score=245.28 Aligned_cols=250 Identities=16% Similarity=0.145 Sum_probs=160.6
Q ss_pred EEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 018750 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (351)
Q Consensus 27 l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 106 (351)
|+|+..|+|+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+...
T Consensus 2 i~y~~~G~g~~~lvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G~G~S~~~~--- 55 (256)
T d1m33a_ 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGFG--- 55 (256)
T ss_dssp CCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHT-----------------------TSEEEEECCTTSTTCCSCC---
T ss_pred eEEEEECCCCCeEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEeCCCCCCccccc---
Confidence 78999999988999999999999999999999987 8999999999999997654
Q ss_pred ccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC--CCccchhhhHHHHhhcc
Q 018750 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CPKLDLQTLSIAIRFFR 184 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 184 (351)
..++.+ +.+.+..++.++++++||||||.+++.+|.++|+++++++++++.+..... .+.............+.
T Consensus 56 ~~~~~d----~~~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (256)
T d1m33a_ 56 ALSLAD----MAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLS 131 (256)
T ss_dssp CCCHHH----HHHHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHH
T ss_pred cccccc----cccccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhh
Confidence 334443 344445566789999999999999999999999999999999875432111 11111111111111000
Q ss_pred cCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccE
Q 018750 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (351)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (351)
...... ...+................................+......... .+..+.++++++|+
T Consensus 132 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~P~ 197 (256)
T d1m33a_ 132 DDQQRT----------VERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKT----VDLRQPLQNVSMPF 197 (256)
T ss_dssp HHHHHH----------HHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH----CCCTTGGGGCCSCE
T ss_pred hhhHHH----------HHHHhhhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcc----cchHHHHHhccCCc
Confidence 000000 0000000000000111111111111111111000000001111000 11224567899999
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 265 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
++|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+||++.
T Consensus 198 lii~G~~D~~~p~~~~~~l~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 198 LRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp EEEEETTCSSSCGGGCC-CTTTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred cccccccCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 99999999999999999888865 8999999998 99999999999999999999875
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=8.9e-34 Score=246.02 Aligned_cols=124 Identities=24% Similarity=0.311 Sum_probs=108.0
Q ss_pred Ccccccc-CCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 16 PDAALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 16 ~~~~~~~-~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
...++++ ||.+|+|.+.|+ ..|+|||+||++++...|......+.+ +|+|+++|+
T Consensus 12 ~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l~~-----------------------~~~Vi~~D~ 68 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPA-----------------------KYRIVLFDQ 68 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSCTT-----------------------TEEEEEECC
T ss_pred CCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccchHHHhHHhhc-----------------------CCEEEEEec
Confidence 3455655 688999999995 335699999999988888766555544 999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
||||.|+.+.....++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|++++++++..
T Consensus 69 rG~G~S~~~~~~~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~ 137 (313)
T d1azwa_ 69 RGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp TTSTTSBSTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cccCCCCccccccchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEecccc
Confidence 999999977666778999999999999999999999999999999999999999999999999999763
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=4.8e-33 Score=237.88 Aligned_cols=272 Identities=14% Similarity=0.124 Sum_probs=170.0
Q ss_pred CccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+.++++++|.+|+|.+.|+++ +|||+||++++...|..+++.|++ +|+|+++|+||
T Consensus 9 ~~~fi~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~G 64 (298)
T d1mj5a_ 9 EKKFIEIKGRRMAYIDEGTGD-PILFQHGNPTSSYLWRNIMPHCAG-----------------------LGRLIACDLIG 64 (298)
T ss_dssp CCEEEEETTEEEEEEEESCSS-EEEEECCTTCCGGGGTTTGGGGTT-----------------------SSEEEEECCTT
T ss_pred CCEEEEECCEEEEEEEEcCCC-cEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEEeCCC
Confidence 357899999999999999875 699999999999999999999987 89999999999
Q ss_pred CCCCCCCCCC--CccchHhHHHHHHHHHH-HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 96 MGRSSVPVKK--TEYTTKIMAKDVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 96 ~G~S~~~~~~--~~~~~~~~~~dl~~~l~-~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
||.|+..... ......+..+++..++. ..+.++++++||||||.+++.++.++|++|.+++++++............
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~ 144 (298)
T d1mj5a_ 65 MGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPE 144 (298)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCG
T ss_pred CCCCCCCccccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhh
Confidence 9999876532 22334555555555554 44668999999999999999999999999999999987653221111111
Q ss_pred hhhhHHHHhhcccCCHHHHhh-----------cCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhh
Q 018750 173 LQTLSIAIRFFRAKTPEKRAA-----------VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQI 241 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
. ......... ......... ...................................... ....
T Consensus 145 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--- 216 (298)
T d1mj5a_ 145 Q-DRDLFQAFR-SQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPI---AGTP--- 216 (298)
T ss_dssp G-GHHHHHHHH-STTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCB---TTBS---
T ss_pred h-hhhhhhhhh-hhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhh---cchh---
Confidence 0 000000000 000000000 00000001111111000000000000000000000000 0000
Q ss_pred hhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 242 HACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
........+....+..+++|+++++|++|.+.+ ...+++.+.+ ++.+++++++||++++|+|++|++.|.+||++.
T Consensus 217 --~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~-p~~~~~~~~~GH~~~~e~P~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 217 --ADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTW-PNQTEITVAGAHFIQEDSPDEIGAAIAAFVRRL 292 (298)
T ss_dssp --HHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTC-SSEEEEEEEESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred --hhhhhhhhhhhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHC-CCCEEEEeCCCCchHHhCHHHHHHHHHHHHhhh
Confidence 000011123345678899999999999998776 4566777765 888888877799999999999999999999986
Q ss_pred CC
Q 018750 322 EK 323 (351)
Q Consensus 322 ~~ 323 (351)
..
T Consensus 293 ~~ 294 (298)
T d1mj5a_ 293 RP 294 (298)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2.7e-33 Score=234.04 Aligned_cols=245 Identities=15% Similarity=0.110 Sum_probs=163.5
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
++|||+||+++++..|..+++.|.+ +||+|+++|+||||.|+.+.. ..++.++++.+
T Consensus 3 ~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~ 59 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWYKLKPLLEA----------------------AGHKVTALDLAASGTDLRKIE-ELRTLYDYTLP 59 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEECCCTTSTTCCCCGG-GCCSHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEecCCCCCCCCCCCC-CCcchHHHHHH
Confidence 3699999999999999999999987 699999999999999987654 46788999999
Q ss_pred HHHHHHHhCC-cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH----
Q 018750 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR---- 191 (351)
Q Consensus 117 l~~~l~~~~~-~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 191 (351)
+..+++.... ++++++||||||.+++.++.++|++++++|++++.......... ..................
T Consensus 60 ~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 136 (258)
T d1xkla_ 60 LMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSS---FVLEQYNERTPAENWLDTQFLP 136 (258)
T ss_dssp HHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTT---HHHHHHHHTSCTTTTTTCEEEE
T ss_pred HhhhhhcccccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchH---HHHHHHhhhhhhhhhhhhhhhh
Confidence 9999988765 58999999999999999999999999999999986533221111 111111111110000000
Q ss_pred ----hhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEE
Q 018750 192 ----AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (351)
Q Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 267 (351)
............................ ...... ............ ......+..+++|+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~P~l~i 203 (258)
T d1xkla_ 137 YGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLA-LASSLV-----RPSSLFMEDLSK-------AKYFTDERFGSVKRVYI 203 (258)
T ss_dssp CSCTTSCCEEEECCHHHHHHHTSTTSCHHHHH-HHHHHC-----CCBCCCHHHHHH-------CCCCCTTTGGGSCEEEE
T ss_pred hhhhhhhcccccccHHHHHHHhhhcccHHHHH-Hhhhhh-----hhhhhhhhhhhh-------hhhcccccccccceeEe
Confidence 0000111112222222222211111110 000000 000000000000 00112345678999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 268 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+++.
T Consensus 204 ~g~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 204 VCTEDKGIPEEFQRWQIDNI-GVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp EETTCTTTTHHHHHHHHHHH-CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred eecCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 99999999999999999987 8999999998 99999999999999999999874
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=2.6e-33 Score=234.39 Aligned_cols=246 Identities=13% Similarity=0.106 Sum_probs=161.7
Q ss_pred EEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHH
Q 018750 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (351)
Q Consensus 39 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (351)
.|||||+++++..|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++++++.
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~----------------------~g~~Via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~ 61 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEA----------------------LGHKVTALDLAASGVDPRQIE-EIGSFDEYSEPLL 61 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHHTHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhh
Confidence 69999999999999999999987 699999999999999987654 4678999999999
Q ss_pred HHHHHhC-CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHH---hhc
Q 018750 119 ALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR---AAV 194 (351)
Q Consensus 119 ~~l~~~~-~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 194 (351)
++++.++ .++++|+||||||.+++.++.++|++|+++|++++..+.....+...................... ...
T Consensus 62 ~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (256)
T d3c70a1 62 TFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKE 141 (256)
T ss_dssp HHHHHSCTTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEE
T ss_pred hhhhhhccccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccc
Confidence 9988875 578999999999999999999999999999999976533222111111111100000000000000 000
Q ss_pred CccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCcc
Q 018750 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (351)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 274 (351)
........................... .... .....+..... ..........+++|+++|+|++|.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~G~~D~~ 208 (256)
T d3c70a1 142 ITGLKLGFTLLRENLYTLCGPEEYELA--KMLT----RKGSLFQNILA-------KRPFFTKEGYGSIKKIYVWTDQDEI 208 (256)
T ss_dssp EEEEECCHHHHHHHTSTTSCHHHHHHH--HHHC----CCBCCCHHHHT-------TSCCCCTTTGGGSCEEEEECTTCSS
T ss_pred cchhhhhhhhhhhhhhhhcchhhHHHh--hhhh----hhhhHHHhhhh-------hcchhhhhhccccceeEEeecCCCC
Confidence 001111222232222221111111000 0000 00000000000 0001112345678999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhc
Q 018750 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
+|++..+++.+.+ ++++++++++ ||++++|+|+++++.|.+|+++.
T Consensus 209 ~~~~~~~~~~~~~-p~~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 209 FLPEFQLWQIENY-KPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp SCHHHHHHHHHHS-CCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 9999999999986 8999999998 99999999999999999999764
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.98 E-value=1.1e-30 Score=224.45 Aligned_cols=123 Identities=27% Similarity=0.308 Sum_probs=111.0
Q ss_pred cccccc-CCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 17 DAALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 17 ~~~~~~-~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
+.++++ ||.+|+|.+.|+ ..|+|||+||++++...|..+...|++ +|+|+++|+|
T Consensus 13 ~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~~-----------------------~~~vi~~D~r 69 (313)
T d1wm1a_ 13 SGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPE-----------------------RYKVLLFDQR 69 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCTT-----------------------TEEEEEECCT
T ss_pred CCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccchHHHHHHhhc-----------------------CCEEEEEeCC
Confidence 455666 699999999996 346799999999999999998877765 9999999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
|||.|+.......++..++++|+..+++.++.++++++|||+||.++..+|..+|++|.+++++++..
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 70 GCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp TSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CcccccccccccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 99999887766788899999999999999999999999999999999999999999999999998763
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.98 E-value=1.9e-31 Score=223.42 Aligned_cols=258 Identities=14% Similarity=0.119 Sum_probs=152.6
Q ss_pred cCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 22 ~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
+.+.+|+|...+.++|+|||+||+++++..|.++++.|.+ .||+|+++|+||||.|..
T Consensus 2 l~~~~lh~~~~~~~~P~ivllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~Dl~G~G~s~~ 59 (264)
T d1r3da_ 2 LLSNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLAR----------------------TQCAALTLDLPGHGTNPE 59 (264)
T ss_dssp CCCEEEESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTT----------------------SSCEEEEECCTTCSSCC-
T ss_pred CcCCeEEEcCCCCCCCeEEEeCCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeccccccccc
Confidence 3467899988888888999999999999999999999987 699999999999999986
Q ss_pred CCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHh
Q 018750 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
... ..........+...+....+.++++++||||||.+++.++.++|+.+.+++++.+.....................
T Consensus 60 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (264)
T d1r3da_ 60 RHC-DNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQ 138 (264)
T ss_dssp -------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHH
T ss_pred ccc-cccchhhhhhhhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhh
Confidence 654 2222333333444444445667999999999999999999999999999888776543221111111000000000
Q ss_pred hcccCCHHHHhhcCccccccHHHHHHhhcCCch---hhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhh
Q 018750 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR---RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (351)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (351)
... ...... ............... .............. ......................+.+.
T Consensus 139 ~~~----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~ 205 (264)
T d1r3da_ 139 QWA----QRFSQQ-----PIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSA----NLGSSVAHMLLATSLAKQPYLLPALQ 205 (264)
T ss_dssp HHH----HHHHHS-----CHHHHHHHHTTSGGGTTCCHHHHHHHHHHHTT----SCHHHHHHHHHHTCGGGCCCCHHHHH
T ss_pred hhh----hhhhhh-----hhhhhhhhhhhhhhhcccchHHHHHHHHHHhh----hhhhhhHHhhhhccccccccchhhhh
Confidence 000 000000 000000010000000 00000000000000 00000000000011111223346678
Q ss_pred ccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 259 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
.+++|+++|+|++|..+ ..+.+. ++++++++++ ||++++|+|+++++.|.+||++..
T Consensus 206 ~~~~p~l~i~G~~D~~~-----~~~~~~--~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 206 ALKLPIHYVCGEQDSKF-----QQLAES--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp TCSSCEEEEEETTCHHH-----HHHHHH--HCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred ccCcceEEEEeCCcHHH-----HHHHhc--CCCeEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 88999999999999643 334442 6889999998 999999999999999999998754
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.97 E-value=2.9e-30 Score=230.79 Aligned_cols=283 Identities=13% Similarity=0.081 Sum_probs=173.3
Q ss_pred CCCCccccccCCeEEEEEEcC---CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 13 SAAPDAALNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 13 ~~~~~~~~~~~g~~l~y~~~g---~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
+..+.-.++++|.+|||.... ++.++|||+||++++...|.++++.|++.+.... ..|+||
T Consensus 80 n~~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~----------------~~f~VI 143 (394)
T d1qo7a_ 80 NSFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPET----------------LPFHLV 143 (394)
T ss_dssp TTSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTT----------------CCEEEE
T ss_pred HcCCCeEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcc----------------cceeee
Confidence 344555577899999997543 3446799999999999999999999997211111 139999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
++|+||||.|+.+.....++..++++++..+++.++.++++++|||+||.++..++..+|+++.++++++.........+
T Consensus 144 aPDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~ 223 (394)
T d1qo7a_ 144 VPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGP 223 (394)
T ss_dssp EECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSC
T ss_pred cccccccCCCCCCCCCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeeccccccccc
Confidence 99999999999887656899999999999999999999999999999999999999999999999999887654332222
Q ss_pred ccchhhhHH------HHhhcccCCHHHHhhc-C----------cccccc---HHHHHHhhcCCchhhhhHHHHHhhhhhc
Q 018750 170 KLDLQTLSI------AIRFFRAKTPEKRAAV-D----------LDTHYS---QEYLEEYVGSSTRRAILYQEYVKGISAT 229 (351)
Q Consensus 170 ~~~~~~~~~------~~~~~~~~~~~~~~~~-~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (351)
......... ................ . ...... .+..........................
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 303 (394)
T d1qo7a_ 224 SIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTE 303 (394)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTT
T ss_pred ccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhcc
Confidence 211111100 0000000000000000 0 000000 0000111111111111111111111000
Q ss_pred cCCCCCCcchhhhhhhc---ccC---CHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccc
Q 018750 230 GMQSNYGFDGQIHACWM---HKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302 (351)
Q Consensus 230 ~~~~~~~~~~~~~~~~~---~~~---~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~ 302 (351)
. ....+..++. ... .........+|++|+++++|++|...+++ .+.+.+....++.++++ ||++
T Consensus 304 ~------~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~ 374 (394)
T d1qo7a_ 304 S------FPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFA 374 (394)
T ss_dssp C------HHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCH
T ss_pred c------cchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCch
Confidence 0 0000000000 000 00111233567899999999999887763 35565533456778886 9999
Q ss_pred cccChHHHHHHHHHHHHh
Q 018750 303 SHERTEEVNQALIDLIKA 320 (351)
Q Consensus 303 ~~~~p~~~~~~i~~fl~~ 320 (351)
++|+|+++++.|.+||++
T Consensus 375 ~~E~Pe~~a~~I~~Fl~~ 392 (394)
T d1qo7a_ 375 ALERPRELKTDLTAFVEQ 392 (394)
T ss_dssp HHHCHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHH
Confidence 999999999999999986
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.96 E-value=1.7e-29 Score=223.67 Aligned_cols=278 Identities=14% Similarity=0.141 Sum_probs=157.7
Q ss_pred ccccCCeEEEEEEc--C-------CCCCeEEEEecCCCCccchH------HHHHHhcCCCCCCCCchhhhcccccCCCCC
Q 018750 19 ALNDNGIKIFYRTY--G-------RGPTKVILITGLAGTHDAWG------PQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (351)
Q Consensus 19 ~~~~~g~~l~y~~~--g-------~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (351)
+.+.||..|..... + ..+|+|||+||+++++..|. .++..|++
T Consensus 32 v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~---------------------- 89 (377)
T d1k8qa_ 32 VVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILAD---------------------- 89 (377)
T ss_dssp EECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHH----------------------
T ss_pred EEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHH----------------------
Confidence 45668876654321 1 13468999999999998884 36667776
Q ss_pred CCeEEEEecCCCCCCCCCCCCC-------Cccc-----hHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKK-------TEYT-----TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER 151 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~-------~~~~-----~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 151 (351)
+||+|+++|+||||.|+.+... ..++ ..++.+++..+++.++.++++|+||||||++++.+|..+|+.
T Consensus 90 ~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~ 169 (377)
T d1k8qa_ 90 AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKL 169 (377)
T ss_dssp TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHH
T ss_pred CCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhh
Confidence 7999999999999999854321 1222 345666777788888999999999999999999999999999
Q ss_pred cceEEEeccCCCCCCCCCccc-hhhh----HHHHhhccc------CCHHH--HhhcCccccccH----HHHHHhhcCCc-
Q 018750 152 VLSLALLNVTGGGFQCCPKLD-LQTL----SIAIRFFRA------KTPEK--RAAVDLDTHYSQ----EYLEEYVGSST- 213 (351)
Q Consensus 152 v~~lvl~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~------~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~- 213 (351)
+++++++....+......... .... ......... ..... ............ ...........
T Consensus 170 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T d1k8qa_ 170 AKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTM 249 (377)
T ss_dssp HTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGG
T ss_pred hhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcc
Confidence 998888765443211110000 0000 000000000 00000 000000000000 00000000000
Q ss_pred -h----------------hhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCC
Q 018750 214 -R----------------RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (351)
Q Consensus 214 -~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~ 276 (351)
. .......+.+..... ....+.....................++++++|+|+|+|++|.+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~ 328 (377)
T d1k8qa_ 250 NLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSG-KFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHC-SCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred cccHHHhhhhhhcccccchHHHHHHHHHHHhcC-cchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccC
Confidence 0 000011111111110 0011111111100000000001112467899999999999999999
Q ss_pred HHHHHHHHHHhCCC-ceEEEcCC-Ccccc---ccChHHHHHHHHHHHHh
Q 018750 277 ICYARRLAEKLYPV-ARMIDLPG-GHLVS---HERTEEVNQALIDLIKA 320 (351)
Q Consensus 277 ~~~~~~~~~~~~~~-~~~~~~~g-gH~~~---~~~p~~~~~~i~~fl~~ 320 (351)
++.++++.+.+ ++ .+++++++ ||+.+ .+.+++|...|.+||++
T Consensus 329 ~~~~~~l~~~l-p~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 329 PHDVDLLLSKL-PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHHHHHTTC-TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHHC-CCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 99999999987 55 47788998 99743 36689999999999986
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=9.6e-28 Score=197.97 Aligned_cols=224 Identities=15% Similarity=0.183 Sum_probs=144.2
Q ss_pred CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
+++|||+||++++...|..+++.|++ +||+|+++|+||||.|..... ..+..+..+
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~----------------------~G~~v~~~D~~G~G~s~~~~~--~~~~~~~~~ 66 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLES----------------------KGYTCHAPIYKGHGVPPEELV--HTGPDDWWQ 66 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHH----------------------TTCEEEECCCTTSSSCHHHHT--TCCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEeCCCCcccccccc--ccchhHHHH
Confidence 45699999999999999999999987 699999999999999875432 223333333
Q ss_pred ---HHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHh
Q 018750 116 ---DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (351)
Q Consensus 116 ---dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (351)
++...++..+.++++++||||||.+++.++.++|.. .+++++++.. .................
T Consensus 67 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~------- 132 (242)
T d1tqha_ 67 DVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMY-----IKSEETMYEGVLEYARE------- 132 (242)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSS-----CCCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHhhhhhcccCceEEEEcchHHHHhhhhcccCccc--cccccccccc-----ccchhHHHHHHHHHHHH-------
Confidence 344445666778999999999999999999999854 4555554421 11111111111000000
Q ss_pred hcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCC
Q 018750 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (351)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 272 (351)
..... ... .............. ........ ..........+..+++|+|+++|++|
T Consensus 133 -----------~~~~~-~~~---~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~p~lii~g~~D 188 (242)
T d1tqha_ 133 -----------YKKRE-GKS---EEQIEQEMEKFKQT----PMKTLKAL-----QELIADVRDHLDLIYAPTFVVQARHD 188 (242)
T ss_dssp -----------HHHHH-TCC---HHHHHHHHHHHTTS----CCTTHHHH-----HHHHHHHHHTGGGCCSCEEEEEETTC
T ss_pred -----------Hhhhc-cch---hhhHHHHHhhhhhh----ccchhhcc-----cccccccccccceeccccceeecccC
Confidence 00000 000 00000000000000 00000000 00112234567788999999999999
Q ss_pred ccCCHHHHHHHHHHhC-CCceEEEcCC-Ccccccc-ChHHHHHHHHHHHHhc
Q 018750 273 VIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKAS 321 (351)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~-~p~~~~~~i~~fl~~~ 321 (351)
.+++++.++.+.+.+. ++++++++++ ||+++++ .++++.+.|.+||++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 189 EMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp SSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 9999999999999873 5789999998 9999987 5899999999999875
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=5.1e-28 Score=203.24 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=92.3
Q ss_pred CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHH
Q 018750 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (351)
|||||+||++++...|..+++.|.+.. .+|+|+++|+||||.|..+. .+++++++++
T Consensus 3 ~PvvllHG~~~~~~~~~~~~~~l~~~~--------------------~~~~v~~~d~~G~g~S~~~~---~~~~~~~~~~ 59 (268)
T d1pjaa_ 3 KPVIVVHGLFDSSYSFRHLLEYINETH--------------------PGTVVTVLDLFDGRESLRPL---WEQVQGFREA 59 (268)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHHS--------------------TTCCEEECCSSCSGGGGSCH---HHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHhhC--------------------CCeEEEEeCCCCCCCCCCcc---ccCHHHHHHH
Confidence 459999999999999999999997511 27999999999999998664 6789999999
Q ss_pred HHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCC
Q 018750 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGG 163 (351)
Q Consensus 117 l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 163 (351)
+.++++.++ ++++|+||||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 60 l~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 60 VVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp HHHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred HHHHHhccC-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 999999998 999999999999999999999998 6999999998643
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.94 E-value=1.6e-26 Score=198.50 Aligned_cols=223 Identities=14% Similarity=0.126 Sum_probs=142.3
Q ss_pred ccCCeEEEEEEcCC------CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 21 NDNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 21 ~~~g~~l~y~~~g~------~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.-||..|+++.+-+ .+++||++||++++...|..+++.|.+ +||+|+++|+|
T Consensus 11 ~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~----------------------~G~~Vi~~D~r 68 (302)
T d1thta_ 11 VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST----------------------NGFHVFRYDSL 68 (302)
T ss_dssp ETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHT----------------------TTCCEEEECCC
T ss_pred cCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHH----------------------CCCEEEEecCC
Confidence 34788899887632 335899999999999999999999999 79999999999
Q ss_pred CC-CCCCCCCCCCccchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCc
Q 018750 95 GM-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 95 G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
|| |.|+... ..+++.++.+|+.++++.+ +.++++|+||||||.+++.+|.. .+++++|+.+|.. .
T Consensus 69 Gh~G~S~g~~--~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~-------~ 137 (302)
T d1thta_ 69 HHVGLSSGSI--DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVV-------N 137 (302)
T ss_dssp BCC----------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCS-------C
T ss_pred CCCCCCCCcc--cCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccc-------c
Confidence 98 8887654 4667888888888777766 56799999999999999998864 3589999988752 1
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
... .......... .......... ..... ........+....... . ....
T Consensus 138 ~~~-~~~~~~~~~~---~~~~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~--------------~--~~~~ 186 (302)
T d1thta_ 138 LRD-TLEKALGFDY---LSLPIDELPN----------DLDFE-GHKLGSEVFVRDCFEH--------------H--WDTL 186 (302)
T ss_dssp HHH-HHHHHHSSCG---GGSCGGGCCS----------EEEET-TEEEEHHHHHHHHHHT--------------T--CSSH
T ss_pred HHH-HHHHHHhhcc---chhhhhhccc----------ccccc-ccchhhHHHHHHHHHh--------------H--HHHH
Confidence 111 1111100000 0000000000 00000 0000000000000000 0 0011
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccChH
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTE 308 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p~ 308 (351)
......+.++++|+|+++|++|.++|++.++++.+.+. +++++++++| ||.+. ++++
T Consensus 187 ~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~ 245 (302)
T d1thta_ 187 DSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLV 245 (302)
T ss_dssp HHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHH
T ss_pred HHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChH
Confidence 23346778999999999999999999999999999874 4689999999 99864 5554
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.94 E-value=1.6e-25 Score=194.77 Aligned_cols=277 Identities=16% Similarity=0.133 Sum_probs=177.2
Q ss_pred CCeEEEEEEcCC----CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC
Q 018750 23 NGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (351)
Q Consensus 23 ~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~ 98 (351)
...+|.|+++|+ +.++||++|++.+++.. ..+++.|...++++|+ ..|.||++|..|.|.
T Consensus 27 ~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~-~~WW~~liG~g~alDt---------------~kyfVI~~n~lG~~~ 90 (376)
T d2vata1 27 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHV-TSWWPTLFGQGRAFDT---------------SRYFIICLNYLGSPF 90 (376)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCG-GGTCGGGBSTTSSBCT---------------TTCEEEEECCTTCSS
T ss_pred CCceEEEEeecccCCCCCCEEEEcCCCcCCccc-cccHHHhCCCCCccCc---------------cceEEEEeccCCCCc
Confidence 467899999995 45689999999988864 3456778889999999 899999999998876
Q ss_pred CCCCC---------------CCCccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 99 SSVPV---------------KKTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 99 S~~~~---------------~~~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
++.++ ....+++.|+++....+++++|++++. ++|.||||++|+++|..+|++|+++|.+++..
T Consensus 91 gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~ 170 (376)
T d2vata1 91 GSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 170 (376)
T ss_dssp SSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCS
T ss_pred CCCCCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhccccccc
Confidence 43221 123468999999999999999999975 77999999999999999999999999999874
Q ss_pred CCCCCCCccchhhhHHHHhhccc------------CCHH-HH---hhcCccccccHHHHHHhhcCCc-------------
Q 018750 163 GGFQCCPKLDLQTLSIAIRFFRA------------KTPE-KR---AAVDLDTHYSQEYLEEYVGSST------------- 213 (351)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~------------- 213 (351)
.... ............+.. ..+. .. .........+.+.+...+....
T Consensus 171 ~~s~----~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~ 246 (376)
T d2vata1 171 RQSG----WCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDA 246 (376)
T ss_dssp BCCH----HHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----------
T ss_pred ccch----HHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchh
Confidence 2110 000000000000000 0000 00 0000001111222222211100
Q ss_pred ----------------hhhhhHHHHHhhhhhc--cCCCCCCcchhhhhhhcccC----CHHHHHHhhccCccEEEEeecC
Q 018750 214 ----------------RRAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKM----TQKDIQTIRSAGFLVSVIHGRH 271 (351)
Q Consensus 214 ----------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvlii~g~~ 271 (351)
......+.|+...... .......+.......-.... ..+..+.+++|++|+|+|.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~s 326 (376)
T d2vata1 247 KKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARS 326 (376)
T ss_dssp -----------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTT
T ss_pred hhcccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCc
Confidence 0001122222211100 00011111111111111111 1245678999999999999999
Q ss_pred CccCCHHHHHHHHHHhCCCceEEEcCC--CccccccChHHHHHHHHHHHHh
Q 018750 272 DVIAQICYARRLAEKLYPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 272 D~~~~~~~~~~~~~~~~~~~~~~~~~g--gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
|.++|++..+++++.+ +++++.++++ ||..++.+++.+.+.|.+||++
T Consensus 327 D~lFPp~~~~e~a~~l-~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 327 DGLYSFDEHVEMGRSI-PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp CSSSCHHHHHHHHHHS-TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred ccCcCHHHHHHHHHhc-CCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9999999999999987 8999999985 9998888899999999999974
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.93 E-value=1.7e-24 Score=187.05 Aligned_cols=281 Identities=14% Similarity=0.110 Sum_probs=178.3
Q ss_pred ccCCeEEEEEEcCC----CCCeEEEEecCCCCccchH-----HHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEe
Q 018750 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (351)
Q Consensus 21 ~~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (351)
++...+|.|+++|. +.++||++|++.+++..+. .+++.|...++++|+ ..|.||++
T Consensus 20 ~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt---------------~kyfVI~~ 84 (357)
T d2b61a1 20 KLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDT---------------DRYFFISS 84 (357)
T ss_dssp EECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEET---------------TTCEEEEE
T ss_pred ccCCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCC---------------CceEEEEe
Confidence 44578999999995 4578999999999876542 245678888889998 78999999
Q ss_pred cCCCCCCCCCCCC-------------CCccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHHHHHhCCcccceEEE
Q 018750 92 DNRGMGRSSVPVK-------------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLAL 157 (351)
Q Consensus 92 D~~G~G~S~~~~~-------------~~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~lvl 157 (351)
|..|.|.++.++. ...+++.|+++....+++++|++++. ++|.||||++|+++|.++|++|+++|.
T Consensus 85 n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~ 164 (357)
T d2b61a1 85 NVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVN 164 (357)
T ss_dssp CCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred cccCCccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcc
Confidence 9999876432221 23568999999999999999999985 669999999999999999999999999
Q ss_pred eccCCCCCCCCCccchhhhHHHHhhcccCC------------HH-HHh---hcCccccccHHHHHHhhcCCch-------
Q 018750 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKT------------PE-KRA---AVDLDTHYSQEYLEEYVGSSTR------- 214 (351)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~---~~~~~~~~~~~~~~~~~~~~~~------- 214 (351)
+++.... ..............+.... +. ... ........+...+...+.....
T Consensus 165 i~~~a~~----s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~ 240 (357)
T d2b61a1 165 LCSSIYF----SAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWG 240 (357)
T ss_dssp ESCCSSC----CHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTS
T ss_pred ccccccc----chhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhcccccccccccc
Confidence 9986311 0000000000111111000 00 000 0000011112222222221110
Q ss_pred hhhhHHHHHhhhhhc--cCCCCCCcchhhhhhhccc---CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-
Q 018750 215 RAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHK---MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY- 288 (351)
Q Consensus 215 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~- 288 (351)
.....+.|++..... .......+........... ...+..+.+++|++|+|+|..+.|.++|++..++.++.+.
T Consensus 241 ~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~ 320 (357)
T d2b61a1 241 DYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQ 320 (357)
T ss_dssp CCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHh
Confidence 001122222221110 0011111111111111111 1234567899999999999999999999999988888762
Q ss_pred --CCceEEEcCC--CccccccChHHHHHHHHHHHHh
Q 018750 289 --PVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 289 --~~~~~~~~~g--gH~~~~~~p~~~~~~i~~fl~~ 320 (351)
.+++++++++ ||..++-+.+++.+.|.+||..
T Consensus 321 ~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 321 SGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp TTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred cCCCeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 3568899986 9999888999999999999975
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.93 E-value=6.6e-25 Score=189.94 Aligned_cols=280 Identities=16% Similarity=0.136 Sum_probs=177.3
Q ss_pred cCCeEEEEEEcCC----CCCeEEEEecCCCCccch---------HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 22 DNGIKIFYRTYGR----GPTKVILITGLAGTHDAW---------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 22 ~~g~~l~y~~~g~----~~p~vv~~HG~~~~~~~~---------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
....+|.|+++|. +.++||++|++.+++..- ..+++.|...++++|+ ..|.|
T Consensus 24 l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt---------------~~yfV 88 (362)
T d2pl5a1 24 LSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT---------------NQYFI 88 (362)
T ss_dssp ESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET---------------TTCEE
T ss_pred cCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCc---------------cccEE
Confidence 3578999999994 457899999999886431 2356678888899999 88999
Q ss_pred EEecCCCCCCCCCCCC-------------CCccchHhHHHHHHHHHHHhCCcceE-EEEEchhhHHHHHHHHhCCcccce
Q 018750 89 CAFDNRGMGRSSVPVK-------------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLS 154 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~-------------~~~~~~~~~~~dl~~~l~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~ 154 (351)
|++|..|.|.|+.++. ....++.|+++....+++++|++++. ++|.||||+.|+++|.+||+.|++
T Consensus 89 I~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~ 168 (362)
T d2pl5a1 89 ICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSN 168 (362)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEE
T ss_pred EeeccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhh
Confidence 9999999887654332 12357889999999999999999987 669999999999999999999999
Q ss_pred EEEeccCCCCCCCCCccchhhhHHHHhhcccCC-----------HH-HH---hhcCccccccHHHHHHhhcCCchhhh--
Q 018750 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT-----------PE-KR---AAVDLDTHYSQEYLEEYVGSSTRRAI-- 217 (351)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-- 217 (351)
+|.+++..... .............+.... +. .. .........+.+.+...+........
T Consensus 169 ~v~ia~sa~~s----~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~ 244 (362)
T d2pl5a1 169 CIVMASTAEHS----AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNIL 244 (362)
T ss_dssp EEEESCCSBCC----HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTT
T ss_pred hcccccccccC----HHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhcccccccccc
Confidence 99999864210 001101111111111100 00 00 00000111223333333222111100
Q ss_pred ----hHHHHHhhhhhccCCCCCC---cchhhhhhhccc--CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC
Q 018750 218 ----LYQEYVKGISATGMQSNYG---FDGQIHACWMHK--MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY 288 (351)
Q Consensus 218 ----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 288 (351)
..+.++.... ......+. +.......-... ...+..+.+++|++|+|+|..+.|.++|++..+++++.+.
T Consensus 245 ~~~~~ve~yl~~~g-~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~ 323 (362)
T d2pl5a1 245 STDFAVGSYLIYQG-ESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLE 323 (362)
T ss_dssp TTTTTSCGGGGSTT-CCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH-HHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHH
Confidence 0011111000 00011111 111111111111 1234567899999999999999999999999999999872
Q ss_pred ---CCceEEEcCC--CccccccChHHHHHHHHHHHHhc
Q 018750 289 ---PVARMIDLPG--GHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 289 ---~~~~~~~~~g--gH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
.+++++++++ ||..++.+.+++.+.|.+||+..
T Consensus 324 ~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~p 361 (362)
T d2pl5a1 324 AADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP 361 (362)
T ss_dssp HTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred hCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcCC
Confidence 2457888885 99999999999999999999753
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.91 E-value=1.4e-23 Score=184.34 Aligned_cols=224 Identities=18% Similarity=0.163 Sum_probs=148.2
Q ss_pred cccCCeEEEEEEcC---CC-CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 20 LNDNGIKIFYRTYG---RG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 20 ~~~~g~~l~y~~~g---~~-~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
+..+|.+|...... ++ .|+||++||+.++.+.|..+...|.+ +||.|+++|+||
T Consensus 111 ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~----------------------~G~~vl~~D~~G 168 (360)
T d2jbwa1 111 LVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLD----------------------RGMATATFDGPG 168 (360)
T ss_dssp EEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred cCcCCcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHh----------------------cCCEEEEEcccc
Confidence 45588888765543 22 37899999999998888888888888 799999999999
Q ss_pred CCCCCCCCCCCccchHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
+|.|..... ...+.+..+..+.+++... +.++|.|+||||||.+|+.+|...| +|+++|.+++.... .
T Consensus 169 ~G~s~~~~~-~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~-------~ 239 (360)
T d2jbwa1 169 QGEMFEYKR-IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDL-------D 239 (360)
T ss_dssp SGGGTTTCC-SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCS-------T
T ss_pred ccccCcccc-ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccH-------H
Confidence 999975543 2334566666666666554 3368999999999999999999887 69999998875311 0
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
.. ....+.. ...+........... ........+ +
T Consensus 240 ~~---------~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~-------------------------~ 273 (360)
T d2jbwa1 240 YW---------DLETPLT-----------KESWKYVSKVDTLEE-ARLHVHAAL-------------------------E 273 (360)
T ss_dssp TG---------GGSCHHH-----------HHHHHHHTTCSSHHH-HHHHHHHHT-------------------------C
T ss_pred HH---------hhhhhhh-----------hHHHHHhccCCchHH-HHHHHHhhc-------------------------c
Confidence 00 0000000 000000011110000 000000000 0
Q ss_pred HHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-CCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
....+.+|+||+|+++|++|. +|++.++.+.+.+. ++.+++++++ +|.. .+.+.+....|.+||.+.-
T Consensus 274 ~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 274 TRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVL 343 (360)
T ss_dssp CTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHH
T ss_pred hhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHHh
Confidence 113467889999999999998 58899999999873 2456777787 8864 4667777888888887754
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.91 E-value=6.6e-23 Score=165.73 Aligned_cols=169 Identities=20% Similarity=0.233 Sum_probs=126.4
Q ss_pred eEEEEecC---CCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 38 KVILITGL---AGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 38 ~vv~~HG~---~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
++|++|+. +++.. .+..+++.|++ +||.|+.+|+||+|.|..... +...
T Consensus 37 ~~vl~Hph~~~GG~~~~~~~~~la~~l~~----------------------~G~~vlrfd~RG~G~S~g~~~----~~~~ 90 (218)
T d2fuka1 37 TAIVCHPLSTEGGSMHNKVVTMAARALRE----------------------LGITVVRFNFRSVGTSAGSFD----HGDG 90 (218)
T ss_dssp EEEEECSCTTTTCSTTCHHHHHHHHHHHT----------------------TTCEEEEECCTTSTTCCSCCC----TTTH
T ss_pred EEEEECCCCCCCcCCCChHHHHHHHHHHH----------------------cCCeEEEeecCCCccCCCccC----cCcc
Confidence 56888854 33322 35667788887 799999999999999987643 2234
Q ss_pred HHHHHHHHHH----HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCH
Q 018750 113 MAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (351)
Q Consensus 113 ~~~dl~~~l~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
.++|+.++++ ..+.++++++||||||.+++.+|... .++++|+++++....
T Consensus 91 ~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------------- 145 (218)
T d2fuka1 91 EQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-----------------------
T ss_pred hHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch-----------------------
Confidence 4555555444 34567899999999999999998874 488999998741000
Q ss_pred HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
.+ ....+.+|+|+|+
T Consensus 146 -----------------------------------------------~~------------------~~~~~~~P~Lvi~ 160 (218)
T d2fuka1 146 -----------------------------------------------DF------------------SDVQPPAQWLVIQ 160 (218)
T ss_dssp -----------------------------------------------CC------------------TTCCCCSSEEEEE
T ss_pred -----------------------------------------------hh------------------hccccccceeeEe
Confidence 00 0013457999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
|++|.++|++.++++.+.+....++++++| +|++ ..+.+++.+.+.+|+++...
T Consensus 161 G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f-~~~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 161 GDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFF-HRKLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp ETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTC-TTCHHHHHHHHHHHHGGGCS
T ss_pred cCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCC-CCCHHHHHHHHHHHHHHhcC
Confidence 999999999999999988766788999999 9975 45667899999999987654
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.5e-23 Score=167.08 Aligned_cols=178 Identities=18% Similarity=0.239 Sum_probs=125.7
Q ss_pred eEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHH
Q 018750 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (351)
Q Consensus 38 ~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (351)
.||++||++++... |..+.+.|.+ +||.|+++|+||+|.+ ..+++++
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~----------------------~G~~v~~~d~p~~~~~---------~~~~~~~ 51 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLA----------------------DGVQADILNMPNPLQP---------RLEDWLD 51 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHH----------------------TTCEEEEECCSCTTSC---------CHHHHHH
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHh----------------------CCCEEEEeccCCCCcc---------hHHHHHH
Confidence 59999999988654 5678888888 7999999999999865 3566777
Q ss_pred HHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcC
Q 018750 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD 195 (351)
Q Consensus 116 dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (351)
.+....+..+ ++++|+||||||.+++.++.++|+.....+++....... ..+..
T Consensus 52 ~l~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~-~~~~~------------------------ 105 (186)
T d1uxoa_ 52 TLSLYQHTLH-ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAK-SLPTL------------------------ 105 (186)
T ss_dssp HHHTTGGGCC-TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSS-CCTTC------------------------
T ss_pred HHHHHHhccC-CCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccc-cchhh------------------------
Confidence 7766665544 789999999999999999999987544433333321100 00000
Q ss_pred ccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccC
Q 018750 196 LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIA 275 (351)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 275 (351)
.....+. ..........++++|+++|+|++|.++
T Consensus 106 -------~~~~~~~---------------------------------------~~~~~~~~~~~~~~p~lvi~g~~D~~v 139 (186)
T d1uxoa_ 106 -------QMLDEFT---------------------------------------QGSFDHQKIIESAKHRAVIASKDDQIV 139 (186)
T ss_dssp -------GGGGGGT---------------------------------------CSCCCHHHHHHHEEEEEEEEETTCSSS
T ss_pred -------hhhhhhh---------------------------------------cccccccccccCCCCEEEEecCCCCCC
Confidence 0000000 000011222345679999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEEcCC-Ccccccc---ChHHHHHHHHHHHHh
Q 018750 276 QICYARRLAEKLYPVARMIDLPG-GHLVSHE---RTEEVNQALIDLIKA 320 (351)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~---~p~~~~~~i~~fl~~ 320 (351)
|++.++.+++.+ +++++++++ ||+...+ ...++.+.|.+||.+
T Consensus 140 p~~~~~~l~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 140 PFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp CHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHc--CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 999999999976 689999998 9987654 346899999999864
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.91 E-value=1.7e-24 Score=183.95 Aligned_cols=216 Identities=15% Similarity=0.125 Sum_probs=143.6
Q ss_pred CCCCeEEEEecC--CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCC-Cccch
Q 018750 34 RGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK-TEYTT 110 (351)
Q Consensus 34 ~~~p~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~ 110 (351)
.+.|+|||+||+ +++...|.++...|.. +++|+++|+||||.|+..... ...++
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~-----------------------~~~V~al~~pG~~~~~~~~~~~~~~s~ 114 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQE-----------------------ERDFLAVPLPGYGTGTGTGTALLPADL 114 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTT-----------------------TCCEEEECCTTCCBC---CBCCEESSH
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCC-----------------------CceEEEEeCCCCCCCCCCccccccCCH
Confidence 456789999995 4667789999999997 899999999999998765431 23588
Q ss_pred HhHHHHHHH-HHHHhCCcceEEEEEchhhHHHHHHHHhC----CcccceEEEeccCCCCCCCCCccchhhhHHHHhhccc
Q 018750 111 KIMAKDVIA-LMDHLGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (351)
Q Consensus 111 ~~~~~dl~~-~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (351)
+++++++.+ +++..+.++++|+||||||.+|+++|.+. +++|.++|++++..... ............
T Consensus 115 ~~~a~~~~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~-------~~~~~~~~~~~~- 186 (283)
T d2h7xa1 115 DTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGH-------QEPIEVWSRQLG- 186 (283)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTC-------CHHHHHTHHHHH-
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCcccc-------ccchhhhhhhhH-
Confidence 999998765 66777888999999999999999999875 45799999999864211 111110000000
Q ss_pred CCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEE
Q 018750 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (351)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (351)
........ .......+.. ...+.+.+ . ......+++|++
T Consensus 187 ---~~~~~~~~-~~~~~~~l~a-----------~~~~~~~~------------------~--------~~~~~~~~~Pvl 225 (283)
T d2h7xa1 187 ---EGLFAGEL-EPMSDARLLA-----------MGRYARFL------------------A--------GPRPGRSSAPVL 225 (283)
T ss_dssp ---HHHHHTCS-SCCCHHHHHH-----------HHHHHHHH------------------H--------SCCCCCCCSCEE
T ss_pred ---HHhhcccc-cccccHHHHH-----------HHHHHHHH------------------h--------hccccccCCCeE
Confidence 00000000 0000000000 00000000 0 001246789999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccc-cChHHHHHHHHHHHHhc
Q 018750 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIKAS 321 (351)
Q Consensus 266 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~-~~p~~~~~~i~~fl~~~ 321 (351)
+|+|++|..++......+.+.+....+++.++|+|+.++ ++++++++.|.+||++.
T Consensus 226 ~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 226 LVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp EEEESSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcCCCcccccCCHHHHHHHHHHHHHhc
Confidence 999999999988877777766544578999999998664 67999999999999864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=2.8e-24 Score=176.98 Aligned_cols=217 Identities=12% Similarity=0.046 Sum_probs=130.2
Q ss_pred CeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC
Q 018750 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (351)
Q Consensus 24 g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (351)
|.+.-+...+..+++|||+||++++...|..+.+.|. +|.|+++|++|+|.
T Consensus 5 g~~~~~~~~~~~~~~l~~lhg~~g~~~~~~~la~~L~------------------------~~~v~~~~~~g~~~----- 55 (230)
T d1jmkc_ 5 GLQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLP------------------------SYKLCAFDFIEEED----- 55 (230)
T ss_dssp SSTTEEEESTTCSEEEEEECCTTCCGGGGHHHHHHCT------------------------TEEEEEECCCCSTT-----
T ss_pred CCceEEeecCCCCCeEEEEcCCCCCHHHHHHHHHHCC------------------------CCEEeccCcCCHHH-----
Confidence 4333333444445689999999999999999999994 69999999998863
Q ss_pred CCCccchHhHHHHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHhCCcccceE---EEeccCCCCCCCCCccchhhhHHH
Q 018750 104 KKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSL---ALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l---vl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
.++++.+.++.+ +.++++|+||||||.+|+.+|.++|+++..+ +.+.+..... ....
T Consensus 56 ---------~a~~~~~~i~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~-------~~~~--- 116 (230)
T d1jmkc_ 56 ---------RLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQG-------VSDL--- 116 (230)
T ss_dssp ---------HHHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECC-------CC-----
T ss_pred ---------HHHHHHHHHHHhCCCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccc-------hhhh---
Confidence 344444444444 4578999999999999999999887665554 4444321100 0000
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCC-ch-hhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHh
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (351)
........ ...+....... .. .............. .... .......
T Consensus 117 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-------~~~~~~~ 164 (230)
T d1jmkc_ 117 DGRTVESD--------------VEALMNVNRDNEALNSEAVKHGLKQKTHA-----------FYSY-------YVNLIST 164 (230)
T ss_dssp ------CC--------------HHHHHHHTTTCSGGGSHHHHHHHHHHHHH-----------HHHH-------HHHCCCC
T ss_pred hhhhhhhh--------------hhhhhhccccccccccHHHHHHHHHHHHH-----------HHHh-------hhccccc
Confidence 00000000 00111111110 00 00000000000000 0000 0011233
Q ss_pred hccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccccCh--HHHHHHHHHHHHhc
Q 018750 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT--EEVNQALIDLIKAS 321 (351)
Q Consensus 258 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~p--~~~~~~i~~fl~~~ 321 (351)
..+++|+++|+|++|..++... ..+.+...++.++++++|||+.++++| +++++.|.+||++.
T Consensus 165 ~~i~~p~l~i~g~~D~~~~~~~-~~w~~~~~~~~~~~~i~g~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 165 GQVKADIDLLTSGADFDIPEWL-ASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp SCBSSEEEEEECSSCCCCCTTE-ECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred ccccCcceeeeecCCcccchhH-HHHHHhccCCcEEEEEcCCChhhcCCccHHHHHHHHHHHHhhc
Confidence 5688999999999999988543 334554446788999999999988866 89999999999864
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.8e-24 Score=180.27 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=85.2
Q ss_pred CccccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 16 ~~~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+..++.+|..|.+...++ .+++|||+||+++++..|..+++.| +++|+++|+|
T Consensus 4 ~~~~~~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~~~~l~~~L-------------------------~~~v~~~d~~ 58 (286)
T d1xkta_ 4 RSLLVNPEGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRL-------------------------SIPTYGLQCT 58 (286)
T ss_dssp GGSCCCTTSCSEEECCCCCCCSCCEEEECCTTCCCGGGHHHHHTC-------------------------SSCEEEECCC
T ss_pred HHHhcCCCCCEEEEecCCCCCCCeEEEECCCCccHHHHHHHHHHc-------------------------CCeEEEEeCC
Confidence 3456677787777776654 3345999999999999999988876 3679999999
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHH-HHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEecc
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIA-LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~-~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (351)
|+|.|+ ++++++++..+ +.+..+.++++|+||||||.+|+.+|.++|+++.++++++.
T Consensus 59 g~~~~~--------~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 59 RAAPLD--------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp TTSCCS--------CHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred CCCCCC--------CHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 999874 56777777654 44555678999999999999999999999999988877664
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=2.9e-23 Score=164.07 Aligned_cols=170 Identities=16% Similarity=0.180 Sum_probs=136.1
Q ss_pred eEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHHHHH
Q 018750 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (351)
Q Consensus 38 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (351)
+|||+||++++...|..+.+.|.+ +||.++.+|.+|++.+.... ..+.+++.+++
T Consensus 4 PVv~vHG~~~~~~~~~~l~~~l~~----------------------~g~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i 58 (179)
T d1ispa_ 4 PVVMVHGIGGASFNFAGIKSYLVS----------------------QGWSRDKLYAVDFWDKTGTN---YNNGPVLSRFV 58 (179)
T ss_dssp CEEEECCTTCCGGGGHHHHHHHHH----------------------TTCCGGGEEECCCSCTTCCH---HHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH----------------------cCCeEEEEecCCcccccccc---chhhhhHHHHH
Confidence 499999999999999999999988 79999999999999886543 44677888899
Q ss_pred HHHHHHhCCcceEEEEEchhhHHHHHHHHhC--CcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcC
Q 018750 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD 195 (351)
Q Consensus 118 ~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (351)
.++++.++.++++++||||||.++..++.++ |++|+++|+++++..+... ..
T Consensus 59 ~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~--------------------------~~ 112 (179)
T d1ispa_ 59 QKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------------KA 112 (179)
T ss_dssp HHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------------BC
T ss_pred HHHHHhcCCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchh--------------------------hh
Confidence 9999999999999999999999999999887 6789999999975211000 00
Q ss_pred ccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccC
Q 018750 196 LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIA 275 (351)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 275 (351)
+. .......+|++.|+|+.|.++
T Consensus 113 ------------------------------l~---------------------------~~~~~~~~~~~~i~~~~D~~v 135 (179)
T d1ispa_ 113 ------------------------------LP---------------------------GTDPNQKILYTSIYSSADMIV 135 (179)
T ss_dssp ------------------------------CC---------------------------CSCTTCCCEEEEEEETTCSSS
T ss_pred ------------------------------cC---------------------------CcccccCceEEEEEecCCccc
Confidence 00 000123478999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 276 QICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
++..+ .+ ++++.+.+++ +|.....+| ++.+.|.+||+...
T Consensus 136 ~~~~~-----~l-~~~~~~~~~~~~H~~l~~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 136 MNYLS-----RL-DGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp CHHHH-----CC-BTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred Cchhh-----cC-CCceEEEECCCCchhhccCH-HHHHHHHHHHhccC
Confidence 98654 24 7888888888 999888887 78999999997654
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=2.5e-21 Score=166.91 Aligned_cols=227 Identities=14% Similarity=0.040 Sum_probs=139.3
Q ss_pred cccCCeEEEEEEc---CCCC-CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC
Q 018750 20 LNDNGIKIFYRTY---GRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (351)
Q Consensus 20 ~~~~g~~l~y~~~---g~~~-p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (351)
...+|.+|+.... +.++ |+||++||++++...|...+..|++ +||.|+++|+||
T Consensus 62 ~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~----------------------~Gy~vi~~D~rG 119 (318)
T d1l7aa_ 62 KSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWAL----------------------HGYATFGMLVRG 119 (318)
T ss_dssp EEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred ECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHH----------------------CCCEEEEEeeCC
Confidence 3447887764332 3333 7899999999999999999999988 799999999999
Q ss_pred CCCCCCCCCCC----------------ccchHhHHHHHHHHHHHh---C---CcceEEEEEchhhHHHHHHHHhCCcccc
Q 018750 96 MGRSSVPVKKT----------------EYTTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVL 153 (351)
Q Consensus 96 ~G~S~~~~~~~----------------~~~~~~~~~dl~~~l~~~---~---~~~v~lvG~S~Gg~~a~~~a~~~p~~v~ 153 (351)
+|.|....... .......+.|....++.+ . ..++.++|+|+||..++..+...+ ++.
T Consensus 120 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~-~~~ 198 (318)
T d1l7aa_ 120 QQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSD-IPK 198 (318)
T ss_dssp TSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCS-CCS
T ss_pred CCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCc-ccc
Confidence 99997654211 111223334444433332 2 246899999999999999999887 477
Q ss_pred eEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCC
Q 018750 154 SLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQS 233 (351)
Q Consensus 154 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (351)
+++...+... .. .......... ................... .. ....
T Consensus 199 ~~~~~~~~~~--------~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~-~~~~------- 245 (318)
T d1l7aa_ 199 AAVADYPYLS--------NF---ERAIDVALEQ-----------PYLEINSFFRRNGSPETEV---QA-MKTL------- 245 (318)
T ss_dssp EEEEESCCSC--------CH---HHHHHHCCST-----------TTTHHHHHHHHSCCHHHHH---HH-HHHH-------
T ss_pred eEEEeccccc--------cH---HHHhhccccc-----------ccchhhhhhhccccccccc---cc-cccc-------
Confidence 7776655311 00 0000000000 0000000000000000000 00 0000
Q ss_pred CCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-CccccccChHHHHH
Q 018750 234 NYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~p~~~~~ 312 (351)
........++++++|+|+++|++|.++|++.+..+.+.+..+.+++++++ ||.... ++.+
T Consensus 246 ---------------~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~----~~~~ 306 (318)
T d1l7aa_ 246 ---------------SYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIP----AFQT 306 (318)
T ss_dssp ---------------HTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCH----HHHH
T ss_pred ---------------cccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcH----HHHH
Confidence 01122345678999999999999999999999999998866789999998 997654 4445
Q ss_pred HHHHHHHhc
Q 018750 313 ALIDLIKAS 321 (351)
Q Consensus 313 ~i~~fl~~~ 321 (351)
.+.+||++.
T Consensus 307 ~~~~fl~~~ 315 (318)
T d1l7aa_ 307 EKLAFFKQI 315 (318)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555543
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.88 E-value=2.2e-21 Score=160.36 Aligned_cols=212 Identities=17% Similarity=0.145 Sum_probs=137.0
Q ss_pred ccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC
Q 018750 19 ALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~ 98 (351)
.+++.|..+.+...++++|+||++||++++...|..+++.|++ +||.|+++|+||||.
T Consensus 7 ~~~l~g~~~~~~~p~~~~~~vl~lHG~~~~~~~~~~~~~~la~----------------------~G~~V~~~D~~g~g~ 64 (238)
T d1ufoa_ 7 RLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAE----------------------RGFLLLAFDAPRHGE 64 (238)
T ss_dssp EEEETTEEEEEEEESSCCEEEEEECCTTCCHHHHHHTSTTTGG----------------------GTEEEEECCCTTSTT
T ss_pred EEEECCEEEEecCCCCCCeEEEEeCCCCCCHHHHHHHHHHHHH----------------------CCCEEEEecCCCCCC
Confidence 4667899888888877888999999999999888888888877 799999999999999
Q ss_pred CCCCCCCCc--cchHhH-------HHHHHHHHH---HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 99 SSVPVKKTE--YTTKIM-------AKDVIALMD---HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 99 S~~~~~~~~--~~~~~~-------~~dl~~~l~---~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
|........ ....+. .+++..++. ....+++.++|+|+||.+++.++..+|. +.+++.+.+......
T Consensus 65 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~ 143 (238)
T d1ufoa_ 65 REGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMK 143 (238)
T ss_dssp SSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCC
T ss_pred CcccccccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeeccccc
Confidence 976543211 111222 222222222 2233689999999999999999999985 555554443321100
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhc
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
. +.. ........... .+.
T Consensus 144 ~-~~~-------------------------~~~~~~~~~~~---------------~~~--------------------- 161 (238)
T d1ufoa_ 144 L-PQG-------------------------QVVEDPGVLAL---------------YQA--------------------- 161 (238)
T ss_dssp C-CTT-------------------------CCCCCHHHHHH---------------HHS---------------------
T ss_pred c-ccc-------------------------cccccccccch---------------hhh---------------------
Confidence 0 000 00000000000 000
Q ss_pred ccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-----CCceEEEcCC-CccccccChHHHHHHHHHHHH
Q 018750 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-----PVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (351)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~ 319 (351)
..........++|+|+++|++|.++|.+..+++.+.+. .+.++..++| ||...-+..+.+.+.+.+||+
T Consensus 162 ----~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 162 ----PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp ----CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred ----hhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 00000113345799999999999999999999988762 2456788898 998765555566666666665
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=1.1e-22 Score=147.62 Aligned_cols=100 Identities=22% Similarity=0.383 Sum_probs=85.3
Q ss_pred ccccccCCeEEEEEEcCCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
..+++++|.+|+|.+.|+|+| |||+||.+ ..| .+.|.+ +|+|+++|+|||
T Consensus 3 ~~~~~~~G~~l~y~~~G~G~p-vlllHG~~---~~w---~~~L~~-----------------------~yrvi~~DlpG~ 52 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVGKGPP-VLLVAEEA---SRW---PEALPE-----------------------GYAFYLLDLPGY 52 (122)
T ss_dssp EEEEEETTEEEEEEEECCSSE-EEEESSSG---GGC---CSCCCT-----------------------TSEEEEECCTTS
T ss_pred ceEEEECCEEEEEEEEcCCCc-EEEEeccc---ccc---cccccC-----------------------CeEEEEEecccc
Confidence 357889999999999999875 99999842 223 344554 999999999999
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 150 (351)
|.|+.+ .++.+++++++.++++.++.++++++||||||.+++.++...+.
T Consensus 53 G~S~~p----~~s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 53 GRTEGP----RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp TTCCCC----CCCHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCCCc----ccccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 999754 46899999999999999999999999999999999999987543
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.84 E-value=7.5e-21 Score=158.70 Aligned_cols=212 Identities=16% Similarity=0.129 Sum_probs=137.2
Q ss_pred EEcCCCCCeEEEEecC--CCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCc
Q 018750 30 RTYGRGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE 107 (351)
Q Consensus 30 ~~~g~~~p~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 107 (351)
...|.++|+|+|+||+ +++...|..+...|.. .+.|+++|+||+|.++.. .
T Consensus 36 l~~g~~~~~l~c~~~~~~gg~~~~y~~La~~L~~-----------------------~~~V~al~~pG~~~~e~~----~ 88 (255)
T d1mo2a_ 36 MADGPGEVTVICCAGTAAISGPHEFTRLAGALRG-----------------------IAPVRAVPQPGYEEGEPL----P 88 (255)
T ss_dssp EECCSCSSEEEEECCCSSSCSGGGGHHHHHHHTT-----------------------TCCEEEECCTTSSTTCCE----E
T ss_pred ccCCCCCCeEEEECCCCCCCCHHHHHHHHHhcCC-----------------------CceEEEEeCCCcCCCCCC----C
Confidence 3445677889999984 5677899999999997 799999999999988644 3
Q ss_pred cchHhHHHHHHHHH-HHhCCcceEEEEEchhhHHHHHHHHhCC---cccceEEEeccCCCCCCCCCccchhhhHHHHhhc
Q 018750 108 YTTKIMAKDVIALM-DHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (351)
Q Consensus 108 ~~~~~~~~dl~~~l-~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (351)
.+++++++++.+.+ +..+..+++|+||||||.+|+++|.+.+ ++|..++++++..+ .............
T Consensus 89 ~s~~~~a~~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p-------~~~~~~~~~~~~~ 161 (255)
T d1mo2a_ 89 SSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPP-------GHQDAMNAWLEEL 161 (255)
T ss_dssp SSHHHHHHHHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCS-------SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCC-------CCccchhhHHHHH
Confidence 48999999887666 4456689999999999999999998754 56999999998631 1111111111111
Q ss_pred ccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCcc
Q 018750 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (351)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (351)
......... .......+.. ...+.+.+ .. -....+++|
T Consensus 162 ~~~~~~~~~-----~~~~~~~l~a-----------~~~~~~~~---------------~~-----------~~~~~~~~p 199 (255)
T d1mo2a_ 162 TATLFDRET-----VRMDDTRLTA-----------LGAYDRLT---------------GQ-----------WRPRETGLP 199 (255)
T ss_dssp HTTCC---------CCCCHHHHHH-----------HHHHHHHH---------------HH-----------CCCCCCCCC
T ss_pred HHHhhcccc-----ccCCHHHHHH-----------HHHHHHHH---------------hc-----------CCCccccce
Confidence 110000000 0000000000 00000000 00 012457899
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCCCccccc-cChHHHHHHHHHHHH
Q 018750 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIK 319 (351)
Q Consensus 264 vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~-~~p~~~~~~i~~fl~ 319 (351)
++++.+++|...... ..+........+++.++|+|+.++ ++++++++.|.+||.
T Consensus 200 ~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~G~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 200 TLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp EEEEECCSSSSCCTT--CCCCCCCCSSCEEEECCSCCSSCSSCCHHHHHHHHHHHHT
T ss_pred EEEeecCCCCCcchh--hHHHHhCCCCcEEEEECCCCcccccccHHHHHHHHHHHhC
Confidence 999999888654432 233343345688999999998554 589999999999995
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.84 E-value=4.1e-20 Score=154.93 Aligned_cols=225 Identities=15% Similarity=0.134 Sum_probs=143.2
Q ss_pred cccccCCeEEEEEEcC---C--CCCeEEEEecCC--CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 18 AALNDNGIKIFYRTYG---R--GPTKVILITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g---~--~~p~vv~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
.+.+.||.+|.....- . +.|+||++||.+ .....|..+...|++ +||.|++
T Consensus 16 ~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~----------------------~G~~v~~ 73 (260)
T d2hu7a2 16 WVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAA----------------------AGFHVVM 73 (260)
T ss_dssp EEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHH----------------------HTCEEEE
T ss_pred EEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHh----------------------hcccccc
Confidence 3556688888655332 1 236899999843 344567788888887 7999999
Q ss_pred ecCCCCCCCCCCCC------CCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCC
Q 018750 91 FDNRGMGRSSVPVK------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (351)
Q Consensus 91 ~D~~G~G~S~~~~~------~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
+|.||++.+..... .....++|+.+.+..+.+....+++.++|+|+||..++.++..+|+.+++++..++..
T Consensus 74 ~d~r~~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~-- 151 (260)
T d2hu7a2 74 PNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVV-- 151 (260)
T ss_dssp ECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCC--
T ss_pred ceeeeccccccccccccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccch--
Confidence 99999877643210 0011123333333333333344689999999999999999999999999999888752
Q ss_pred CCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhh
Q 018750 165 FQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (351)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
...... ..... ....+......... +.+ ..
T Consensus 152 -------~~~~~~------~~~~~-----------~~~~~~~~~~~~~~------~~~-~~------------------- 181 (260)
T d2hu7a2 152 -------DWEEMY------ELSDA-----------AFRNFIEQLTGGSR------EIM-RS------------------- 181 (260)
T ss_dssp -------CHHHHH------HTCCH-----------HHHHHHHHHHCSCH------HHH-HH-------------------
T ss_pred -------hhhhhh------ccccc-----------cccccccccccccc------ccc-cc-------------------
Confidence 110000 00000 00011111111000 000 00
Q ss_pred hcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Ccccc-ccChHHHHHHHHHHHH
Q 018750 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-HERTEEVNQALIDLIK 319 (351)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~-~~~p~~~~~~i~~fl~ 319 (351)
......++++++|+|+++|++|.++|++.+.++.+.+ ...++++++++ ||.+. .++..++.+.+.+||.
T Consensus 182 ------~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~ 255 (260)
T d2hu7a2 182 ------RSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLA 255 (260)
T ss_dssp ------TCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHH
T ss_pred ------cchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHH
Confidence 0111235678899999999999999999999998776 34578999998 99754 4677788889999998
Q ss_pred hcC
Q 018750 320 ASE 322 (351)
Q Consensus 320 ~~~ 322 (351)
++.
T Consensus 256 ~hl 258 (260)
T d2hu7a2 256 TQR 258 (260)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.82 E-value=8.3e-23 Score=176.17 Aligned_cols=250 Identities=14% Similarity=0.139 Sum_probs=136.6
Q ss_pred cccccCCeEEEEEEcCC-CCCeEEEEecCCCCccchHH-------HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 018750 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGP-------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (351)
Q Consensus 18 ~~~~~~g~~l~y~~~g~-~~p~vv~~HG~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (351)
..+..++..+.|+...+ .+++|||+||++.+...|.. ++..+.+ +||+|+
T Consensus 39 ~~~~~~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~----------------------~Gy~V~ 96 (318)
T d1qlwa_ 39 GTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLR----------------------KGYSTY 96 (318)
T ss_dssp EEEEESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHH----------------------TTCCEE
T ss_pred CceeeceEEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHh----------------------CCCEEE
Confidence 34455666677776544 34569999999999988864 4555665 699999
Q ss_pred EecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcc-cceEEEeccCCCCCC
Q 018750 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQ 166 (351)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~ 166 (351)
++|+||||.|..+. ..++..++.+++.++++.+.. .++.++|||+||.++..++...+.. ...+++.+.......
T Consensus 97 ~~D~~G~G~S~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (318)
T d1qlwa_ 97 VIDQSGRGRSATDI--SAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLG 174 (318)
T ss_dssp EEECTTSTTSCCCC--HHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGG
T ss_pred EecCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEecccccccc
Confidence 99999999997654 245556666666666655432 4677889999999988877655332 222232222211100
Q ss_pred CCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCc---hhhhhHHHHHhhhhhccCCCCCCcchhhhh
Q 018750 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST---RRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (351)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (351)
.... ........... ......... .................... ...
T Consensus 175 ~~~~-~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 224 (318)
T d1qlwa_ 175 SMPT-PNPTVANLSKL----------------------AIKLDGTVLLSHSQSGIYPFQTAAMNPKGITA------IVS- 224 (318)
T ss_dssp GSCS-SCHHHHHHHHH----------------------HHHHTSEEEEEEGGGTTHHHHHHHHCCTTEEE------EEE-
T ss_pred chhh-hhhhHHHHHHH----------------------HhhhccccchhhhcccchhhhhhhhhhhHHHH------HHh-
Confidence 0000 00000000000 000000000 00000000000000000000 000
Q ss_pred hhcccCCHHHHHHhhccCccEEEEeecCCccCCHH-----HHHHHHHH---hCCCceEEEcC-----C-CccccccCh-H
Q 018750 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQIC-----YARRLAEK---LYPVARMIDLP-----G-GHLVSHERT-E 308 (351)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~-----~~~~~~~~---~~~~~~~~~~~-----g-gH~~~~~~p-~ 308 (351)
...............+++|+|+++|++|.++|+. ..+.+.+. ...+++++.++ | ||+++.|.+ +
T Consensus 225 -~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~ 303 (318)
T d1qlwa_ 225 -VEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNL 303 (318)
T ss_dssp -ESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHH
T ss_pred -hhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHH
Confidence 0000001112345667899999999999999843 23333332 34678888865 5 799998864 9
Q ss_pred HHHHHHHHHHHhcC
Q 018750 309 EVNQALIDLIKASE 322 (351)
Q Consensus 309 ~~~~~i~~fl~~~~ 322 (351)
++++.|.+||++..
T Consensus 304 ~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 304 QVADLILDWIGRNT 317 (318)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999864
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.81 E-value=8.8e-19 Score=151.22 Aligned_cols=209 Identities=13% Similarity=0.048 Sum_probs=126.6
Q ss_pred cccCCeEEEEEEc---C-CC-CCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 20 LNDNGIKIFYRTY---G-RG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 20 ~~~~g~~l~y~~~---g-~~-~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
.+.+|.+|+.... + ++ .|+||++||++.+...+.... .+++ +||.|+++|+|
T Consensus 61 ~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~-~~a~----------------------~G~~v~~~D~r 117 (322)
T d1vlqa_ 61 SGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWL-FWPS----------------------MGYICFVMDTR 117 (322)
T ss_dssp ECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGC-HHHH----------------------TTCEEEEECCT
T ss_pred ECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHH-HHHh----------------------CCCEEEEeecc
Confidence 3457888875443 2 22 368999999988776665443 4554 59999999999
Q ss_pred CCCCCCCCCCCC-----------------------ccchHhHHHHHHHHHHHh------CCcceEEEEEchhhHHHHHHH
Q 018750 95 GMGRSSVPVKKT-----------------------EYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLA 145 (351)
Q Consensus 95 G~G~S~~~~~~~-----------------------~~~~~~~~~dl~~~l~~~------~~~~v~lvG~S~Gg~~a~~~a 145 (351)
|+|.|....... .......+.|....++.+ ..+++.++|+|+||.+++..+
T Consensus 118 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~ 197 (322)
T d1vlqa_ 118 GQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVS 197 (322)
T ss_dssp TCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHH
T ss_pred ccCCCCCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHH
Confidence 999986543211 111223344555555443 124689999999999999888
Q ss_pred HhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhh
Q 018750 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKG 225 (351)
Q Consensus 146 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (351)
...| ++++++...+... .... ......... ......................
T Consensus 198 ~~~~-~~~a~v~~~~~~~--------~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-- 249 (322)
T d1vlqa_ 198 ALSK-KAKALLCDVPFLC--------HFRR---AVQLVDTHP--------------YAEITNFLKTHRDKEEIVFRTL-- 249 (322)
T ss_dssp HHCS-SCCEEEEESCCSC--------CHHH---HHHHCCCTT--------------HHHHHHHHHHCTTCHHHHHHHH--
T ss_pred hcCC-CccEEEEeCCccc--------cHHH---HHhhccccc--------------hhhHHhhhhcCcchhhhHHHHh--
Confidence 8776 6888887765421 0000 000000000 0000000000000000000000
Q ss_pred hhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Cccc
Q 018750 226 ISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302 (351)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~ 302 (351)
...+....+.++++|+|+++|++|.++|++.+..+.+.+...++++++++ ||..
T Consensus 250 -----------------------~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 250 -----------------------SYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp -----------------------HTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred -----------------------hhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCC
Confidence 00123345678899999999999999999999999998866789999998 9954
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.79 E-value=9.2e-19 Score=146.33 Aligned_cols=181 Identities=18% Similarity=0.181 Sum_probs=129.4
Q ss_pred CeEEEEEEc-CCCC-CeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCC
Q 018750 24 GIKIFYRTY-GRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (351)
Q Consensus 24 g~~l~y~~~-g~~~-p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (351)
+..|+|-.. ++++ |.||++||++++...+..+.+.|++ +||.|+++|.+|++...
T Consensus 38 ~~~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~----------------------~Gy~V~~~d~~~~~~~~- 94 (260)
T d1jfra_ 38 GGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLAS----------------------QGFVVFTIDTNTTLDQP- 94 (260)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHT----------------------TTCEEEEECCSSTTCCH-
T ss_pred CEEEEEcCCCCCCCccEEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeeCCCcCCc-
Confidence 356777543 3343 7899999999999999999999998 79999999999876542
Q ss_pred CCCCCccchHhHHHHHHHHHHH------hCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhh
Q 018750 102 PVKKTEYTTKIMAKDVIALMDH------LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (351)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~------~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
.....++.+.+..+.+. +..+++.++|||+||.+++.++...+ ++.++|.+++....
T Consensus 95 -----~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~----------- 157 (260)
T d1jfra_ 95 -----DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD----------- 157 (260)
T ss_dssp -----HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC-----------
T ss_pred -----hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc-----------
Confidence 11122233333333322 23357999999999999999998876 68888888764100
Q ss_pred hHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHH
Q 018750 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (351)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
.
T Consensus 158 -------------------------------------------------------------------------------~ 158 (260)
T d1jfra_ 158 -------------------------------------------------------------------------------K 158 (260)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HhhccCccEEEEeecCCccCCHHH-HHHHHHHhC--CCceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 256 TIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLY--PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 256 ~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
.+.++++|+|+++|++|.++|++. .+.+.+.+. ...++++++| +|........++.+.+..||+....
T Consensus 159 ~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~ 230 (260)
T d1jfra_ 159 TWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID 230 (260)
T ss_dssp CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred cccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhc
Confidence 113456899999999999999865 455555442 2456888898 9987766667888888888876643
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.79 E-value=2.7e-18 Score=138.08 Aligned_cols=181 Identities=16% Similarity=0.132 Sum_probs=127.9
Q ss_pred EEEEEcC-CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC--
Q 018750 27 IFYRTYG-RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV-- 103 (351)
Q Consensus 27 l~y~~~g-~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~-- 103 (351)
++....+ ++.|+||++||++++...|..+.+.|.. ++.|++++.+..+......
T Consensus 7 ~~~~~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~~~~~~~~~~~~ 63 (203)
T d2r8ba1 7 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLP-----------------------QATILSPVGDVSEHGAARFFR 63 (203)
T ss_dssp CEEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHST-----------------------TSEEEEECCSEEETTEEESSC
T ss_pred EeecCCCCCCCCEEEEECCCCCCHHHHHHHHHHhcc-----------------------CCeEEEecccccccccccccc
Confidence 4444444 4678999999999999999999999987 8889999877544432111
Q ss_pred --CCCcc---chHhHHHHHHHHHH----HhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchh
Q 018750 104 --KKTEY---TTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (351)
Q Consensus 104 --~~~~~---~~~~~~~dl~~~l~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
..... ++...++.+..+++ ..+.++++++|+|+||.+++.++..+|+.+.+++++++..+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~-------- 135 (203)
T d2r8ba1 64 RTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------- 135 (203)
T ss_dssp BCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------
T ss_pred ccCccccchhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccc--------
Confidence 00111 22333444444443 35668899999999999999999999999999999997521000
Q ss_pred hhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHH
Q 018750 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (351)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
.
T Consensus 136 -------------------------------------~------------------------------------------ 136 (203)
T d2r8ba1 136 -------------------------------------K------------------------------------------ 136 (203)
T ss_dssp -------------------------------------C------------------------------------------
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred HHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCCCccccccChHHHHHHHHHHHHhc
Q 018750 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (351)
Q Consensus 255 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~~ 321 (351)
........|++++||++|.++|++.++++.+.+. -+.+++++++||.+. + +..+.+.+||.+.
T Consensus 137 ~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~ggH~~~---~-~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 137 ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR---S-GEIDAVRGFLAAY 202 (203)
T ss_dssp CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC---H-HHHHHHHHHHGGG
T ss_pred cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCcCC---H-HHHHHHHHHHHhc
Confidence 0001224689999999999999999999988772 346788888899753 3 3456688999764
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.79 E-value=2e-18 Score=138.74 Aligned_cols=173 Identities=15% Similarity=0.082 Sum_probs=121.5
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCC----CCCccc
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV----KKTEYT 109 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~ 109 (351)
+..|+||++||++++...|..+.+.+.+ ++.|++++.+..+...... .....+
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~-----------------------~~~vv~p~~~~~~~~~~~~~~~~~~~~~~ 68 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDS-----------------------EASVLSVRGNVLENGMPRFFRRLAEGIFD 68 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHT-----------------------TSCEEEECCSEEETTEEESSCEEETTEEC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhcc-----------------------CCceeeecccccCCCCccccccCCCCCCc
Confidence 4568999999999999999999999987 8999998765433321110 001122
Q ss_pred hHh---HHHHHHH----HHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHH
Q 018750 110 TKI---MAKDVIA----LMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (351)
Q Consensus 110 ~~~---~~~dl~~----~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (351)
.++ .++++.. +.+..+. +++.++|+|+||.+++.++..+|+++.+++++++..+...
T Consensus 69 ~~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~-------------- 134 (202)
T d2h1ia1 69 EEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------- 134 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc--------------
Confidence 222 2223333 3344443 5899999999999999999999999999999887521000
Q ss_pred hhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhcc
Q 018750 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (351)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (351)
.......
T Consensus 135 -------------------------------------------------------------------------~~~~~~~ 141 (202)
T d2h1ia1 135 -------------------------------------------------------------------------MQLANLA 141 (202)
T ss_dssp -------------------------------------------------------------------------CCCCCCT
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000223
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhCC---CceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
..|+++++|++|.++|++.++++.+.+.. +.+++.+++||... .+..+.+.+||++
T Consensus 142 ~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ggH~~~----~~~~~~~~~wl~k 200 (202)
T d2h1ia1 142 GKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQLT----MGEVEKAKEWYDK 200 (202)
T ss_dssp TCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCC----HHHHHHHHHHHHH
T ss_pred cchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCcCC----HHHHHHHHHHHHH
Confidence 46899999999999999999999887732 46788889999653 4556678888875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=6.1e-18 Score=138.60 Aligned_cols=181 Identities=16% Similarity=0.159 Sum_probs=121.2
Q ss_pred CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCC---------C-----
Q 018750 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR---------S----- 99 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~---------S----- 99 (351)
+..++||++||+|++...|..+...+.. .++.+++++-|.+.. +
T Consensus 19 ~~~~~VI~lHG~G~~~~~~~~~~~~l~~----------------------~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~ 76 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGHGWAEAFAGIRS----------------------SHIKYICPHAPVRPVTLNMNVAMPSWFDII 76 (229)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTCC----------------------TTEEEEECCCCEEEEGGGTTEEEECSSCBC
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHhcC----------------------CCCEEEeCCCCCCccccCCCcccccccccc
Confidence 4446899999999999888888887766 689999988653210 0
Q ss_pred CCCCC--CCccchHhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccc
Q 018750 100 SVPVK--KTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (351)
Q Consensus 100 ~~~~~--~~~~~~~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
..... .....+++.++.+..+++.. ..++++++|+|+||.+|+.++.++|+++.++|.+++..+....
T Consensus 77 ~~~~~~~~~~~~i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~----- 151 (229)
T d1fj2a_ 77 GLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS----- 151 (229)
T ss_dssp CCSTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----
T ss_pred cccccchhhhHHHHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc-----
Confidence 00000 01112344445555555432 3468999999999999999999999999999999864210000
Q ss_pred hhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHH
Q 018750 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (351)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
.....
T Consensus 152 ------------------------------------~~~~~--------------------------------------- 156 (229)
T d1fj2a_ 152 ------------------------------------FPQGP--------------------------------------- 156 (229)
T ss_dssp ------------------------------------SCSSC---------------------------------------
T ss_pred ------------------------------------ccccc---------------------------------------
Confidence 00000
Q ss_pred HHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC-----CCceEEEcCC-CccccccChHHHHHHHHHHHHhcC
Q 018750 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-----PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (351)
Q Consensus 253 ~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~ 322 (351)
......++|++++||++|.++|.+.+++..+.+. .+.+++++++ ||... + +..+.+.+||++.-
T Consensus 157 --~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~-~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 157 --IGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---Q-QEMMDVKQFIDKLL 226 (229)
T ss_dssp --CCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---H-HHHHHHHHHHHHHS
T ss_pred --cccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC---H-HHHHHHHHHHHhHC
Confidence 0001224799999999999999998887776651 2567888998 99653 2 33566888998764
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.78 E-value=1.1e-17 Score=139.81 Aligned_cols=221 Identities=14% Similarity=0.112 Sum_probs=133.2
Q ss_pred ccccCCeEEEEEEcCC-----CC--CeEEEEecCCCC-----ccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe
Q 018750 19 ALNDNGIKIFYRTYGR-----GP--TKVILITGLAGT-----HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-----~~--p~vv~~HG~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (351)
++..||.+++|...-+ ++ |+||++||.++. ...+......+++ +||
T Consensus 8 ~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~----------------------~g~ 65 (258)
T d2bgra2 8 FIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST----------------------ENI 65 (258)
T ss_dssp EEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCC
T ss_pred EEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhc----------------------CCc
Confidence 7888999999987522 22 789999995222 1222333444565 699
Q ss_pred EEEEecCCCCCCCCCCC---CCCccchHhHHHHHHHHHHHh----CC--cceEEEEEchhhHHHHHHHHhCCcccceEEE
Q 018750 87 EVCAFDNRGMGRSSVPV---KKTEYTTKIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (351)
Q Consensus 87 ~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~dl~~~l~~~----~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl 157 (351)
.|+.+|.||.+.+.... ....+.. ...+++.++++.+ .+ +++.++|+|+||.+++.++..+|+.+...+.
T Consensus 66 ~V~~~d~rg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~ 144 (258)
T d2bgra2 66 IVASFDGRGSGYQGDKIMHAINRRLGT-FEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIA 144 (258)
T ss_dssp EEEEECCTTCSSSCHHHHGGGTTCTTS-HHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEE
T ss_pred EEEeecccccCCcchHHHHhhhhhhhh-HHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEE
Confidence 99999999987543110 0011111 1233334444433 22 4699999999999999999999988777777
Q ss_pred eccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCc
Q 018750 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (351)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (351)
.++.... .... .............. ...... ...
T Consensus 145 ~~~~~~~-------~~~~--------------------------~~~~~~~~~~~~~~-~~~~~~-~~~----------- 178 (258)
T d2bgra2 145 VAPVSRW-------EYYD--------------------------SVYTERYMGLPTPE-DNLDHY-RNS----------- 178 (258)
T ss_dssp ESCCCCG-------GGSB--------------------------HHHHHHHHCCCSTT-TTHHHH-HHS-----------
T ss_pred eeccccc-------cccc--------------------------ccccchhcccccch-hhHHHh-hcc-----------
Confidence 6654210 0000 00000000000000 000000 000
Q ss_pred chhhhhhhcccCCHHHHHHhhcc-CccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Ccccc-ccChHHHH
Q 018750 238 DGQIHACWMHKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-HERTEEVN 311 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~-~~~p~~~~ 311 (351)
.. ...+.++ ++|++++||++|..+|+..++++.+.+ ..+++++++++ +|... .+..+++.
T Consensus 179 -----------~~---~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~ 244 (258)
T d2bgra2 179 -----------TV---MSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIY 244 (258)
T ss_dssp -----------CS---GGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHH
T ss_pred -----------cc---cccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHH
Confidence 00 0112222 379999999999999999988888765 34678999999 99643 45678899
Q ss_pred HHHHHHHHhcC
Q 018750 312 QALIDLIKASE 322 (351)
Q Consensus 312 ~~i~~fl~~~~ 322 (351)
+.+.+||++.-
T Consensus 245 ~~i~~fl~~~l 255 (258)
T d2bgra2 245 THMSHFIKQCF 255 (258)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.77 E-value=3.1e-18 Score=138.41 Aligned_cols=181 Identities=19% Similarity=0.169 Sum_probs=118.7
Q ss_pred eEEEEEEcC---CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC----C
Q 018750 25 IKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----G 97 (351)
Q Consensus 25 ~~l~y~~~g---~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~----G 97 (351)
..+.|+..+ ++.|+||++||++++...|..+.+.|.. ++.+++++.+.. .
T Consensus 9 ~~~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~-----------------------~~~~l~~~~~~~~~~~~ 65 (209)
T d3b5ea1 9 LAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-----------------------TATLVAARGRIPQEDGF 65 (209)
T ss_dssp SSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-----------------------TSEEEEECCSEEETTEE
T ss_pred CcceeEecCCCCCCCCEEEEEcCCCCCHHHHHHHHHHhcc-----------------------CcEEEeeccCcCcccCc
Confidence 334455544 3568999999999999999999999987 888998875421 1
Q ss_pred CCCCCCCCCccchH-------hHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 018750 98 RSSVPVKKTEYTTK-------IMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (351)
Q Consensus 98 ~S~~~~~~~~~~~~-------~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (351)
...........+.. .+.+.|..+.+..+ .++++++|||+||.+++.++..+|+++.+++++++......
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~-- 143 (209)
T d3b5ea1 66 RWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-- 143 (209)
T ss_dssp ESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS--
T ss_pred cccccCCccccchhhHHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc--
Confidence 10000000112222 22233334444444 36899999999999999999999999999999987521000
Q ss_pred CccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhccc
Q 018750 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (351)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
T Consensus 144 -------------------------------------------------------------------------------- 143 (209)
T d3b5ea1 144 -------------------------------------------------------------------------------- 143 (209)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
. ......++|+++++|++|.++++ .++++.+.+ ..+.+++++++||... +++ .+.+.+||..
T Consensus 144 ~-----~~~~~~~~p~~~~~G~~D~~~~~-~~~~~~~~l~~~G~~v~~~~~~ggH~i~---~~~-~~~~~~wl~~ 208 (209)
T d3b5ea1 144 V-----PATDLAGIRTLIIAGAADETYGP-FVPALVTLLSRHGAEVDARIIPSGHDIG---DPD-AAIVRQWLAG 208 (209)
T ss_dssp C-----CCCCCTTCEEEEEEETTCTTTGG-GHHHHHHHHHHTTCEEEEEEESCCSCCC---HHH-HHHHHHHHHC
T ss_pred c-----cccccccchheeeeccCCCccCH-HHHHHHHHHHHCCCCeEEEEECCCCCCC---HHH-HHHHHHHhCC
Confidence 0 00022347999999999999984 344455444 3456888889899763 333 4567899863
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=7e-18 Score=141.20 Aligned_cols=105 Identities=15% Similarity=0.206 Sum_probs=74.2
Q ss_pred CeEEEEEEcC-CCCCeEEEEecCC-----CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 24 GIKIFYRTYG-RGPTKVILITGLA-----GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 24 g~~l~y~~~g-~~~p~vv~~HG~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
...+.+...+ +++|+||++||.+ .+...|..+.+.+.+ .+++.||.|+++|+|..+
T Consensus 18 ~~~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~------------------~~~~~g~~v~~~dYrl~p 79 (263)
T d1vkha_ 18 NKTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKS------------------MDTESTVCQYSIEYRLSP 79 (263)
T ss_dssp GGCEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHH------------------HCTTCCEEEEEECCCCTT
T ss_pred cceEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHH------------------HHHhCCeEEEEeccccCc
Confidence 3445666554 5678999999954 233445555444432 222269999999999765
Q ss_pred CCCCCCCCCccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcc
Q 018750 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER 151 (351)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 151 (351)
... ....+++..+.+..+++..+.++++|+|||+||.+++.++...++.
T Consensus 80 ~~~-----~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 80 EIT-----NPRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp TSC-----TTHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred chh-----hhHHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 543 2335677777788888888888999999999999999998876643
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.76 E-value=6.9e-17 Score=131.05 Aligned_cols=178 Identities=19% Similarity=0.183 Sum_probs=124.8
Q ss_pred CCCeEEEEecC---CCCcc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccc
Q 018750 35 GPTKVILITGL---AGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (351)
Q Consensus 35 ~~p~vv~~HG~---~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (351)
..+++|++||. +++.. ....+...|.+ +||.|+.+|+||.|.|....+.....
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~----------------------~G~~~lrfn~RG~g~S~G~~~~~~~e 80 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQK----------------------RGFTTLRFNFRSIGRSQGEFDHGAGE 80 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHH----------------------TTCEEEEECCTTSTTCCSCCCSSHHH
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHh----------------------cCeeEEEEecCccCCCccccccchhH
Confidence 45689999984 44432 23456667776 79999999999999998766422222
Q ss_pred hHhHHHHHHHHHHHh-CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCCCCccchhhhHHHHhhcccCCH
Q 018750 110 TKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~-~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (351)
.++....+..+.... ...+++++|+|+||.+++.++.+.+ .+.+++++.+......
T Consensus 81 ~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~---------------------- 137 (218)
T d2i3da1 81 LSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD---------------------- 137 (218)
T ss_dssp HHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC----------------------
T ss_pred HHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc----------------------
Confidence 222222222222222 2357899999999999999998875 4777888776521000
Q ss_pred HHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhccCccEEEEe
Q 018750 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (351)
...+....+|+|+++
T Consensus 138 -----------------------------------------------------------------~~~~~~~~~p~l~i~ 152 (218)
T d2i3da1 138 -----------------------------------------------------------------FSFLAPCPSSGLIIN 152 (218)
T ss_dssp -----------------------------------------------------------------CTTCTTCCSCEEEEE
T ss_pred -----------------------------------------------------------------hhhccccCCCceeee
Confidence 011233457999999
Q ss_pred ecCCccCCHHHHHHHHHHhCC----CceEEEcCC-CccccccChHHHHHHHHHHHHhcCC
Q 018750 269 GRHDVIAQICYARRLAEKLYP----VARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (351)
Q Consensus 269 g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~g-gH~~~~~~p~~~~~~i~~fl~~~~~ 323 (351)
|+.|.+++......+.+.+.. ..++++++| +|++. .+.+++.+.+.+||++...
T Consensus 153 g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~l~ 211 (218)
T d2i3da1 153 GDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLN 211 (218)
T ss_dssp ETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHT
T ss_pred cccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHHhcC
Confidence 999999999998888877632 358899998 99764 6779999999999987654
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.74 E-value=4.7e-18 Score=146.15 Aligned_cols=104 Identities=24% Similarity=0.341 Sum_probs=91.3
Q ss_pred CCCCCeEEEEecCCCCcc------chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 018750 33 GRGPTKVILITGLAGTHD------AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 106 (351)
.+.+.+|||+||++++.. .|..+.+.|.+ +||+|+++|+||+|.|+....
T Consensus 5 ~~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~----------------------~G~~V~~~~~~g~g~s~~~~~-- 60 (319)
T d1cvla_ 5 AATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQS----------------------HGAKVYVANLSGFQSDDGPNG-- 60 (319)
T ss_dssp TCCSSCEEEECCTTBSSEETTTEESSTTHHHHHHH----------------------TTCCEEECCCBCSSCTTSTTS--
T ss_pred CCCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHH----------------------CCCEEEEecCCCCCCCCCCcc--
Confidence 344546999999988765 37788899988 799999999999999875542
Q ss_pred ccchHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+.+++++++.++++.++.+++++|||||||.++..++.++|++|+++|+++++.
T Consensus 61 --~~~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 61 --RGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp --HHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --cHHHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 678899999999999999999999999999999999999999999999999864
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.73 E-value=6.4e-17 Score=132.80 Aligned_cols=195 Identities=12% Similarity=0.079 Sum_probs=131.1
Q ss_pred ccccccCCeEEEEEEcC---CCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 17 DAALNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 17 ~~~~~~~g~~l~y~~~g---~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
-.+...||..+..+... .+.|.||++|+..|.......+.+.|++ +||.|+++|+
T Consensus 6 v~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~----------------------~Gy~vl~pd~ 63 (233)
T d1dina_ 6 ISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVD----------------------QGYAAVCPDL 63 (233)
T ss_dssp CCEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHH----------------------TTCEEEEECG
T ss_pred EEEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHh----------------------cCCcceeeee
Confidence 34556678777655442 2346899999877766666777888887 7999999999
Q ss_pred CCCCCCCCCCCCC-------------ccchHhHHHHHHHHHHHhC-----CcceEEEEEchhhHHHHHHHHhCCcccceE
Q 018750 94 RGMGRSSVPVKKT-------------EYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (351)
Q Consensus 94 ~G~G~S~~~~~~~-------------~~~~~~~~~dl~~~l~~~~-----~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~l 155 (351)
.|.+......... ..+.+....|+...++.+. .+++.++|+|+||.+++.++... .+.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~ 141 (233)
T d1dina_ 64 YARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRA 141 (233)
T ss_dssp GGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEE
T ss_pred ccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--cccee
Confidence 8766554322111 1234445566666666552 14799999999999999988763 35555
Q ss_pred EEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCC
Q 018750 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (351)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (351)
+.+.+...
T Consensus 142 ~~~~~~~~------------------------------------------------------------------------ 149 (233)
T d1dina_ 142 VGYYGVGL------------------------------------------------------------------------ 149 (233)
T ss_dssp EEESCSCG------------------------------------------------------------------------
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 54433210
Q ss_pred CcchhhhhhhcccCCHHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC--CCceEEEcCC-CccccccC------
Q 018750 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY--PVARMIDLPG-GHLVSHER------ 306 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~g-gH~~~~~~------ 306 (351)
....+...++++|+|+++|++|..+|.+..+.+.+.+. ++.++++++| +|.+..+.
T Consensus 150 ---------------~~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~ 214 (233)
T d1dina_ 150 ---------------EKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVA 214 (233)
T ss_dssp ---------------GGGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCH
T ss_pred ---------------ccchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCH
Confidence 00001235678899999999999999998888877653 4568899999 99654322
Q ss_pred --hHHHHHHHHHHHHhcC
Q 018750 307 --TEEVNQALIDLIKASE 322 (351)
Q Consensus 307 --p~~~~~~i~~fl~~~~ 322 (351)
.++-.+.+.+||...+
T Consensus 215 ~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 215 SAAALANERTLDFLAPLQ 232 (233)
T ss_dssp HHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHcCc
Confidence 2344677888998754
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.72 E-value=4.1e-17 Score=138.13 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=84.0
Q ss_pred CeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 37 TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 37 p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
++|||+||++++... |..+.+.|.+ +||.|+.+|+||+|.++. ..+.++++
T Consensus 32 ~PVvlvHG~~~~~~~~~~~~~~~~L~~----------------------~Gy~v~~~d~~g~g~~d~-----~~sae~la 84 (317)
T d1tcaa_ 32 KPILLVPGTGTTGPQSFDSNWIPLSTQ----------------------LGYTPCWISPPPFMLNDT-----QVNTEYMV 84 (317)
T ss_dssp SEEEEECCTTCCHHHHHTTTHHHHHHT----------------------TTCEEEEECCTTTTCSCH-----HHHHHHHH
T ss_pred CcEEEECCCCCCCcchhHHHHHHHHHh----------------------CCCeEEEecCCCCCCCch-----HhHHHHHH
Confidence 469999999887654 6778899988 799999999999998752 33567777
Q ss_pred HHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCc---ccceEEEeccCC
Q 018750 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTG 162 (351)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~ 162 (351)
+.+..+++..+.+++.||||||||.++..++..+|+ +|+.+|.+++..
T Consensus 85 ~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 85 NAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 778888888888999999999999999999999884 699999999864
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=3.6e-17 Score=136.56 Aligned_cols=220 Identities=13% Similarity=0.159 Sum_probs=126.5
Q ss_pred ccccCCeEEEEEEcCC-------CCCeEEEEecCCCC---ccch--HHHHHHhcCCCCCCCCchhhhcccccCCCCCCCe
Q 018750 19 ALNDNGIKIFYRTYGR-------GPTKVILITGLAGT---HDAW--GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (351)
Q Consensus 19 ~~~~~g~~l~y~~~g~-------~~p~vv~~HG~~~~---~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (351)
.++.||.+|+....-+ .-|+||++||.+++ ...| ......|++ +||
T Consensus 7 ~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~----------------------~G~ 64 (258)
T d1xfda2 7 DIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS----------------------HGA 64 (258)
T ss_dssp CEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCC
T ss_pred EEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhc----------------------CCc
Confidence 4567899987654421 22789999996332 2233 233456777 799
Q ss_pred EEEEecCCCCCCCCC------CCCCCccchHhHHHHHHHHHHHhC--CcceEEEEEchhhHHHHHHHHhCCc----ccce
Q 018750 87 EVCAFDNRGMGRSSV------PVKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLS 154 (351)
Q Consensus 87 ~vi~~D~~G~G~S~~------~~~~~~~~~~~~~~dl~~~l~~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~ 154 (351)
.|+++|.||.+.+.. ..........+..+.+..+++... .+++.++|+|+||.+++.++...++ .+..
T Consensus 65 ~vv~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~ 144 (258)
T d1xfda2 65 VVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTC 144 (258)
T ss_dssp EEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSE
T ss_pred EEEEeccccccccchhHhhhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeee
Confidence 999999998553311 110011123333333333333323 2579999999999999988776654 3555
Q ss_pred EEEeccCCCCCCCCCccchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCC
Q 018750 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (351)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (351)
.+.+++.... ... ................
T Consensus 145 ~~~~~~~~~~-------~~~--------------------------~~~~~~~~~~~~~~~~------------------ 173 (258)
T d1xfda2 145 GSALSPITDF-------KLY--------------------------ASAFSERYLGLHGLDN------------------ 173 (258)
T ss_dssp EEEESCCCCT-------TSS--------------------------BHHHHHHHHCCCSSCC------------------
T ss_pred eeccccceee-------ecc--------------------------ccccccccccccccch------------------
Confidence 5555543210 000 0000000000000000
Q ss_pred CCcchhhhhhhcccCCHHHHHHhhc-cCccEEEEeecCCccCCHHHHHHHHHHh---CCCceEEEcCC-Cccccc-cChH
Q 018750 235 YGFDGQIHACWMHKMTQKDIQTIRS-AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTE 308 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvlii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-~~p~ 308 (351)
.. + ........+.. .++|+|+++|+.|..+|++.+.++.+.+ ..+.+++++++ +|.... +...
T Consensus 174 ~~--------~---~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~ 242 (258)
T d1xfda2 174 RA--------Y---EMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQ 242 (258)
T ss_dssp SS--------T---TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHH
T ss_pred HH--------h---hccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHH
Confidence 00 0 00011122233 3689999999999999999988887765 34678999998 997543 4566
Q ss_pred HHHHHHHHHHHhcC
Q 018750 309 EVNQALIDLIKASE 322 (351)
Q Consensus 309 ~~~~~i~~fl~~~~ 322 (351)
.+.+.+.+||++.-
T Consensus 243 ~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 243 HLYRSIINFFVECF 256 (258)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhh
Confidence 78899999998753
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.67 E-value=9.3e-17 Score=135.20 Aligned_cols=100 Identities=19% Similarity=0.277 Sum_probs=87.4
Q ss_pred CCCCeEEEEecCCCCccc-----hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc
Q 018750 34 RGPTKVILITGLAGTHDA-----WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (351)
+.+.+|||+||++++... |..+.+.|.+ +||+|+++|++|+|.+ ..
T Consensus 5 ~~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~----------------------~G~~v~~~~~~~~~~~-------~~ 55 (285)
T d1ex9a_ 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR----------------------DGAQVYVTEVSQLDTS-------EV 55 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHH----------------------TTCCEEEECCCSSSCH-------HH
T ss_pred CCCCCEEEECCCCCCccccchhhHHHHHHHHHh----------------------CCCEEEEeCCCCCCCc-------HH
Confidence 344459999999876543 7889999988 7999999999999865 34
Q ss_pred chHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 109 TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
+.+++.++|.++++..+.+++++|||||||.++..++..+|++|+++|.++++.
T Consensus 56 ~a~~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 56 RGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 678889999999999999999999999999999999999999999999999864
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.66 E-value=6.2e-15 Score=119.44 Aligned_cols=180 Identities=17% Similarity=0.131 Sum_probs=113.5
Q ss_pred CCCCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC--------CCCCC----
Q 018750 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG--------MGRSS---- 100 (351)
Q Consensus 33 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--------~G~S~---- 100 (351)
++.+++||++||+|++...|..+.+.|...+ .++.+++++-|. .....
T Consensus 11 ~~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~--------------------~~~~~i~p~ap~~~~~~~~~~~~~~w~~~ 70 (218)
T d1auoa_ 11 KPADACVIWLHGLGADRYDFMPVAEALQESL--------------------LTTRFVLPQAPTRPVTINGGYEMPSWYDI 70 (218)
T ss_dssp SCCSEEEEEECCTTCCTTTTHHHHHHHHTTC--------------------TTEEEEECCCCEEEEGGGTTEEEECSSCE
T ss_pred CCCCeEEEEEcCCCCChhhHHHHHHHHHHhC--------------------CCcEEEccCCCccccccCCCcccCccccc
Confidence 3455689999999999999988888887521 256677665431 10000
Q ss_pred -CCCCCCccc---hHhHHHHHHHHHH---HhC--CcceEEEEEchhhHHHHHHHHh-CCcccceEEEeccCCCCCCCCCc
Q 018750 101 -VPVKKTEYT---TKIMAKDVIALMD---HLG--WKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 101 -~~~~~~~~~---~~~~~~dl~~~l~---~~~--~~~v~lvG~S~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
........+ ++...+.+.++++ ..+ .++++++|+|+||.+++.++.. .+..+.+++.+++..+.....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~-- 148 (218)
T d1auoa_ 71 KAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDE-- 148 (218)
T ss_dssp EECSSSCEECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTT--
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccc--
Confidence 000001111 2222233333433 223 4689999999999999988765 466789999988642100000
Q ss_pred cchhhhHHHHhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCC
Q 018750 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (351)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
. ..
T Consensus 149 -----------------------------------------~------------------------------------~~ 151 (218)
T d1auoa_ 149 -----------------------------------------L------------------------------------EL 151 (218)
T ss_dssp -----------------------------------------C------------------------------------CC
T ss_pred -----------------------------------------c------------------------------------cc
Confidence 0 00
Q ss_pred HHHHHHhhccCccEEEEeecCCccCCHHHHHHHHHHhC---CCceEEEcCCCccccccChHHHHHHHHHHHHh
Q 018750 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (351)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~ggH~~~~~~p~~~~~~i~~fl~~ 320 (351)
. . ...+.|++++||++|.++|.+.+++..+.+. .+.+++.+++||... ++..+.|.+||.+
T Consensus 152 ~---~--~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~gH~i~----~~~~~~i~~wl~~ 215 (218)
T d1auoa_ 152 S---A--SQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVL----PQEIHDIGAWLAA 215 (218)
T ss_dssp C---H--HHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCC----HHHHHHHHHHHHH
T ss_pred c---h--hccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCccC----HHHHHHHHHHHHH
Confidence 0 0 1124699999999999999999988888773 256888888899654 3445668888865
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.60 E-value=2.9e-15 Score=124.50 Aligned_cols=176 Identities=14% Similarity=0.065 Sum_probs=109.9
Q ss_pred cCCCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCcc
Q 018750 32 YGRGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (351)
Q Consensus 32 ~g~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (351)
.++..|+||++||.+ ++...|..+...|.+ +||.|+.+|+|..+..
T Consensus 58 ~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~----------------------~G~~Vv~~~YRl~p~~--------- 106 (261)
T d2pbla1 58 EGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALS----------------------KGWAVAMPSYELCPEV--------- 106 (261)
T ss_dssp SSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHH----------------------TTEEEEEECCCCTTTS---------
T ss_pred CCCCCCeEEEECCCCCccCChhHhhhHHHHHhc----------------------CCceeecccccccccc---------
Confidence 345668999999964 445567777888887 7999999999965433
Q ss_pred chHhHHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCC------cccceEEEeccCCCCCCCCCccchhhhHHH
Q 018750 109 TTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVP------ERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (351)
Q Consensus 109 ~~~~~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (351)
++.+.++|+.+.++.+ ..+++.|+|||.||.++..++.... ..+++++.+++... +....
T Consensus 107 ~~p~~~~d~~~a~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---- 175 (261)
T d2pbla1 107 RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSD-------LRPLL---- 175 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCC-------CGGGG----
T ss_pred cCchhHHHHHHHHHHHHhcccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccc-------cchhh----
Confidence 3344444444444333 2378999999999999987665432 34788888876521 00000
Q ss_pred HhhcccCCHHHHhhcCccccccHHHHHHhhcCCchhhhhHHHHHhhhhhccCCCCCCcchhhhhhhcccCCHHHHHHhhc
Q 018750 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (351)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (351)
.. .....+.... +.... . .......+
T Consensus 176 ----~~------------------~~~~~~~~~~------~~~~~-~-------------------------SP~~~~~~ 201 (261)
T d2pbla1 176 ----RT------------------SMNEKFKMDA------DAAIA-E-------------------------SPVEMQNR 201 (261)
T ss_dssp ----GS------------------TTHHHHCCCH------HHHHH-T-------------------------CGGGCCCC
T ss_pred ----hh------------------hhcccccCCH------HHHHH-h-------------------------Cchhhccc
Confidence 00 0000000000 00000 0 00112345
Q ss_pred cCccEEEEeecCCccCCHHHHHHHHHHhCCCceEEEcCC-Ccccccc
Q 018750 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (351)
Q Consensus 260 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~ 305 (351)
.+.|+++++|++|..++...++++.+.+ +++.+++++ +|+-.++
T Consensus 202 ~~~P~li~~G~~D~~~~~~qs~~~~~~l--~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 202 YDAKVTVWVGGAERPAFLDQAIWLVEAW--DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp CSCEEEEEEETTSCHHHHHHHHHHHHHH--TCEEEEETTCCTTTTTG
T ss_pred CCCeEEEEEecCCCchHHHHHHHHHHHh--CCCceEeCCCCchhHHH
Confidence 6689999999999988888999999987 467788888 8976543
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.55 E-value=1.1e-13 Score=120.08 Aligned_cols=119 Identities=15% Similarity=0.186 Sum_probs=84.9
Q ss_pred cCCeEEEEEEcC---CCC-CeEEEEecCCCCcc----chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecC
Q 018750 22 DNGIKIFYRTYG---RGP-TKVILITGLAGTHD----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (351)
Q Consensus 22 ~~g~~l~y~~~g---~~~-p~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (351)
.||++|....+- .++ |+||+.||++.... .+......|++ +||.|+++|.
T Consensus 13 rDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~----------------------~GY~vv~~d~ 70 (347)
T d1ju3a2 13 RDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVR----------------------DGYAVVIQDT 70 (347)
T ss_dssp TTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHH----------------------TTCEEEEEEC
T ss_pred CCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHH----------------------CCCEEEEEee
Confidence 489998866543 233 68899999875322 22233445555 7999999999
Q ss_pred CCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC--cceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCC
Q 018750 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (351)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
||+|.|+..... .........|+.+.+..... .+|.++|+|+||.+++.+|...|..++++|...+...
T Consensus 71 RG~g~S~G~~~~-~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 71 RGLFASEGEFVP-HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp TTSTTCCSCCCT-TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred CCccccCCcccc-ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 999999875532 22333344555555555433 5899999999999999999998888999998887653
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.40 E-value=6.1e-12 Score=109.31 Aligned_cols=121 Identities=18% Similarity=0.075 Sum_probs=76.8
Q ss_pred ccccCCeEEEEEEc---CC--CCCeEEEEecCCC---Ccc--chHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 19 ALNDNGIKIFYRTY---GR--GPTKVILITGLAG---THD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 19 ~~~~~g~~l~y~~~---g~--~~p~vv~~HG~~~---~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
+...+|..|....+ +. ..|+||++||.+. +.. .+..++..+++ +|+.|
T Consensus 84 i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~----------------------~g~~V 141 (358)
T d1jkma_ 84 ILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA----------------------AGSVV 141 (358)
T ss_dssp EECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHH----------------------TTCEE
T ss_pred EeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHh----------------------hhhee
Confidence 33457766654433 32 2368999999753 222 34567777777 69999
Q ss_pred EEecCCCCCCCCCCCCCCccchHhHHHHHHHHHH---HhCCcceEEEEEchhhHHHHHHHHh-----CCcccceEEEecc
Q 018750 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD---HLGWKQAHVFGHSMGAMIACKLAAM-----VPERVLSLALLNV 160 (351)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~---~~~~~~v~lvG~S~Gg~~a~~~a~~-----~p~~v~~lvl~~~ 160 (351)
+.+|+|..+....... ...-++|..+.+..+.+ .++.++++|+|+|.||.+++.++.. ....+.++++..+
T Consensus 142 vsvdYRla~~~~pe~~-~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p 220 (358)
T d1jkma_ 142 VMVDFRNAWTAEGHHP-FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIP 220 (358)
T ss_dssp EEEECCCSEETTEECC-TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESC
T ss_pred eeeeecccccccccCC-CchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccc
Confidence 9999997643321111 12234444444443433 3567799999999999999877654 2345788888877
Q ss_pred CC
Q 018750 161 TG 162 (351)
Q Consensus 161 ~~ 162 (351)
..
T Consensus 221 ~~ 222 (358)
T d1jkma_ 221 YI 222 (358)
T ss_dssp CC
T ss_pred ee
Confidence 53
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.39 E-value=3.2e-12 Score=111.97 Aligned_cols=122 Identities=14% Similarity=-0.006 Sum_probs=81.1
Q ss_pred cccCCeEEEEEEc---CCCC-CeEEEEecCCCCcc-------c----hHHHHHHhcCCCCCCCCchhhhcccccCCCCCC
Q 018750 20 LNDNGIKIFYRTY---GRGP-TKVILITGLAGTHD-------A----WGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (351)
Q Consensus 20 ~~~~g~~l~y~~~---g~~~-p~vv~~HG~~~~~~-------~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
...||++|....+ +.++ |+||+.|+++.+.. . +....+.|++ +
T Consensus 30 ~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~----------------------~ 87 (381)
T d1mpxa2 30 PMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVE----------------------G 87 (381)
T ss_dssp ECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHH----------------------T
T ss_pred ECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHh----------------------C
Confidence 3447999985543 3333 67888998764211 1 1122344555 7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCc-------cchHhHHHHHHHHHHHh----CC--cceEEEEEchhhHHHHHHHHhCCcc
Q 018750 85 GIEVCAFDNRGMGRSSVPVKKTE-------YTTKIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPER 151 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~-------~~~~~~~~dl~~~l~~~----~~--~~v~lvG~S~Gg~~a~~~a~~~p~~ 151 (351)
||.|+.+|.||+|.|+....... ....+.++|+.+.++.+ .+ ++|.++|+|+||.+++.+|...|..
T Consensus 88 Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~ 167 (381)
T d1mpxa2 88 GYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA 167 (381)
T ss_dssp TCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT
T ss_pred CCEEEEEecCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccc
Confidence 99999999999999986432100 01122345555544432 22 4899999999999999999999989
Q ss_pred cceEEEeccCCC
Q 018750 152 VLSLALLNVTGG 163 (351)
Q Consensus 152 v~~lvl~~~~~~ 163 (351)
++++|..++...
T Consensus 168 l~a~v~~~~~~d 179 (381)
T d1mpxa2 168 LKVAVPESPMID 179 (381)
T ss_dssp EEEEEEESCCCC
T ss_pred cceeeeeccccc
Confidence 999999888654
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.39 E-value=2.1e-11 Score=107.65 Aligned_cols=76 Identities=14% Similarity=0.006 Sum_probs=62.4
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHhCC--------------------cceEEEEEchhhHHHHH
Q 018750 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--------------------KQAHVFGHSMGAMIACK 143 (351)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--------------------~~v~lvG~S~Gg~~a~~ 143 (351)
+||.|+.+|.||.|.|+.... .++.+ -.+|..++++.+.. .+|.++|+|+||.+++.
T Consensus 135 ~GYavv~~D~RG~g~S~G~~~--~~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~ 211 (405)
T d1lnsa3 135 RGFASIYVAGVGTRSSDGFQT--SGDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYG 211 (405)
T ss_dssp TTCEEEEECCTTSTTSCSCCC--TTSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCccc--cCChh-hhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHH
Confidence 799999999999999987653 33333 46677777777642 37999999999999999
Q ss_pred HHHhCCcccceEEEeccCC
Q 018750 144 LAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 144 ~a~~~p~~v~~lvl~~~~~ 162 (351)
+|...|..++++|..++..
T Consensus 212 aA~~~pp~LkAivp~~~~~ 230 (405)
T d1lnsa3 212 AATTGVEGLELILAEAGIS 230 (405)
T ss_dssp HHTTTCTTEEEEEEESCCS
T ss_pred HHhcCCccceEEEecCccc
Confidence 9999998999999988763
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.34 E-value=6.7e-11 Score=100.90 Aligned_cols=86 Identities=21% Similarity=0.217 Sum_probs=57.7
Q ss_pred CeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhH
Q 018750 37 TKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (351)
Q Consensus 37 p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (351)
|+||++||.+ ++...+..+...++.. .||.|+.+|+|.......+. .+++.
T Consensus 79 Pvvv~iHGGG~~~g~~~~~~~~~~~la~~---------------------~G~~V~~vdYrl~pe~~~~~-----~~~d~ 132 (317)
T d1lzla_ 79 PVLLWIHGGGFAIGTAESSDPFCVEVARE---------------------LGFAVANVEYRLAPETTFPG-----PVNDC 132 (317)
T ss_dssp EEEEEECCSTTTSCCGGGGHHHHHHHHHH---------------------HCCEEEEECCCCTTTSCTTH-----HHHHH
T ss_pred cEEEEecCcccccccccccchHHHhHHhh---------------------cCCccccccccccccccccc-----ccccc
Confidence 6899999964 4555666777766541 39999999999766543221 23333
Q ss_pred HHHH---HHHHHHhCC--cceEEEEEchhhHHHHHHHHhC
Q 018750 114 AKDV---IALMDHLGW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 114 ~~dl---~~~l~~~~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
.+.+ .+..+.++. ++|+++|+|.||.+++.++...
T Consensus 133 ~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 133 YAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhh
Confidence 3332 233334454 5799999999999999888764
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.33 E-value=1.7e-11 Score=104.36 Aligned_cols=114 Identities=14% Similarity=0.103 Sum_probs=70.3
Q ss_pred cCCeEEEEEEcC--CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 22 DNGIKIFYRTYG--RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 22 ~~g~~l~y~~~g--~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
..+..+..+.+. ...|+||++||.+ ++...+..++..++.. .|+.|+.+|+|..
T Consensus 63 ~~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~---------------------~g~~Vv~v~Yrla 121 (311)
T d1jjia_ 63 GRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARL---------------------SNSTVVSVDYRLA 121 (311)
T ss_dssp ETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH---------------------HTSEEEEEECCCT
T ss_pred CCCCcEEEEEEcCCCCceEEEEEcCCCCccCChhhhhhhhhhhhhc---------------------CCcEEEEeccccc
Confidence 333344444333 3457899999975 4555666677666541 4999999999965
Q ss_pred CCCCCCCCCCccchHhHHHHHHHHH---HHhCC--cceEEEEEchhhHHHHHHHHhC----CcccceEEEeccC
Q 018750 97 GRSSVPVKKTEYTTKIMAKDVIALM---DHLGW--KQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVT 161 (351)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l---~~~~~--~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl~~~~ 161 (351)
..... ...+++..+.+..+. +.++. +++.+.|+|.||.+++.++... .....+.+++.+.
T Consensus 122 p~~~~-----p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~ 190 (311)
T d1jjia_ 122 PEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPV 190 (311)
T ss_dssp TTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCC
T ss_pred ccccc-----chhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecce
Confidence 43322 223343333333333 33343 5799999999999888776543 2346777777765
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.27 E-value=1.5e-10 Score=95.48 Aligned_cols=52 Identities=13% Similarity=0.207 Sum_probs=41.0
Q ss_pred hHhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 110 TKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
...+++++...++.. ..+++.++|+|+||..++.++.++|+.+.+++.+++.
T Consensus 113 ~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~ 169 (255)
T d1jjfa_ 113 TKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 169 (255)
T ss_dssp HHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccC
Confidence 344555555555543 2356999999999999999999999999999999875
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.25 E-value=9.2e-11 Score=99.55 Aligned_cols=117 Identities=16% Similarity=0.145 Sum_probs=70.8
Q ss_pred ccccCCeEEEEEEc---CC--CCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 19 ALNDNGIKIFYRTY---GR--GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 19 ~~~~~g~~l~y~~~---g~--~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
.++.+|..+....+ +. +.|+||++||.+ ++...+..+...++.. .++.|+.
T Consensus 50 ~~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~---------------------~~~~v~~ 108 (308)
T d1u4na_ 50 DMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKD---------------------GRAVVFS 108 (308)
T ss_dssp EEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEE
T ss_pred EEecCCceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccchhhhhhhc---------------------ccccccc
Confidence 34456766554332 21 236899999975 4556677777777661 2467889
Q ss_pred ecCCCCCCCCCCCCCCccchHhHHHHHHHHHHHh---CC--cceEEEEEchhhHHHHHHHHhCCc----ccceEEEeccC
Q 018750 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (351)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~lvl~~~~ 161 (351)
+|+|....... ....+|..+.+..+.+.. +. +++++.|+|.||.+++.++....+ .+.+..++.+.
T Consensus 109 v~Yrl~p~~~~-----p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~ 183 (308)
T d1u4na_ 109 VDYRLAPEHKF-----PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPS 183 (308)
T ss_dssp ECCCCTTTSCT-----THHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCC
T ss_pred ccccccccccc-----ccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccc
Confidence 99985543321 223344444443333322 22 479999999999999888765432 35566666654
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.23 E-value=2e-09 Score=89.19 Aligned_cols=116 Identities=19% Similarity=0.194 Sum_probs=80.6
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCCc--cchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGTH--DAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~~--~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
.|+.+.+.....+.|+|+++||.+++. ..|.. +.+.... .++.|+.+|--+.+
T Consensus 14 ~~r~~~~~v~~~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~----------------------~~~iVV~p~g~~~~ 71 (267)
T d1r88a_ 14 MGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAG----------------------KGISVVAPAGGAYS 71 (267)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTT----------------------SSSEEEEECCCTTS
T ss_pred CCceeeEEEECCCCCEEEEcCCCCCCCCcchhhhccHHHHHHhh----------------------CCeEEEEECCCCCc
Confidence 467788777777778999999986643 34543 3444444 68999999852221
Q ss_pred C-CCCCCCCCccchHh-HHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 98 R-SSVPVKKTEYTTKI-MAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 98 ~-S~~~~~~~~~~~~~-~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
. +..+.. ....+++ +.++|...++.. ..+++.+.|+||||..|+.+|.++|+++.+++.+++.
T Consensus 72 ~y~~~~~~-~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~ 139 (267)
T d1r88a_ 72 MYTNWEQD-GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 139 (267)
T ss_dssp TTSBCSSC-TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CCcccccc-ccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCc
Confidence 1 111111 2233443 445677777643 3357899999999999999999999999999999976
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.18 E-value=1.2e-09 Score=91.66 Aligned_cols=116 Identities=18% Similarity=0.192 Sum_probs=77.1
Q ss_pred CeEEEEEEc--CCCCCeEEEEecCCCCcc--chHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCC
Q 018750 24 GIKIFYRTY--GRGPTKVILITGLAGTHD--AWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (351)
Q Consensus 24 g~~l~y~~~--g~~~p~vv~~HG~~~~~~--~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (351)
|..+.+... +...|+|+++||.+++.+ .|.. +.+.+.+ .++.+++++..+.
T Consensus 20 ~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~----------------------~~~~~v~~~~~~~ 77 (288)
T d1sfra_ 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQ----------------------SGLSVVMPVGGQS 77 (288)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTT----------------------SSCEEEEECCCTT
T ss_pred CcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHh----------------------CCCEEEEeccCCC
Confidence 555554443 345588999999887543 3322 2344444 6899999998766
Q ss_pred CCCCCCCCC-------Cccch-HhHHHHHHHHHHH-hC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 97 GRSSVPVKK-------TEYTT-KIMAKDVIALMDH-LG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 97 G~S~~~~~~-------~~~~~-~~~~~dl~~~l~~-~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+........ ..... ..+++++...++. .+ .+++.+.|+||||..|+.++.++|+++.+++.+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~ 153 (288)
T d1sfra_ 78 SFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGL 153 (288)
T ss_dssp CTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CCCccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCc
Confidence 544332210 01122 2345566655543 33 357999999999999999999999999999999976
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.17 E-value=2e-11 Score=100.32 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=77.5
Q ss_pred eEEEEecCCCCc---cchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHhHH
Q 018750 38 KVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (351)
Q Consensus 38 ~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (351)
+||++||++++. ..|..+...+.+.. .|+.|++++......+..... ....+.+++
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~--------------------pG~~V~~l~~g~~~~~~~~~~-~~~~~~~~~ 65 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKI--------------------PGIHVLSLEIGKTLREDVENS-FFLNVNSQV 65 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHS--------------------TTCCEEECCCSSSHHHHHHHH-HHSCHHHHH
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHC--------------------CCeEEEEEEcCCCcccccccc-hhhhHHHHH
Confidence 699999998764 35667666665411 289999999864333211110 112356667
Q ss_pred HHHHHHHHHh--CCcceEEEEEchhhHHHHHHHHhCCc-ccceEEEeccCCCCCCCCCc
Q 018750 115 KDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK 170 (351)
Q Consensus 115 ~dl~~~l~~~--~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~ 170 (351)
+.+.+.++.. +.+++.+|||||||.++-.++.+.++ +|..+|.++++..|....|.
T Consensus 66 e~v~~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~Gv~~~p~ 124 (279)
T d1ei9a_ 66 TTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPR 124 (279)
T ss_dssp HHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTCBCSCTT
T ss_pred HHHHHHHHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCCCccCCcc
Confidence 7766666543 33679999999999999999999875 59999999998766554443
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.17 E-value=1.1e-09 Score=91.40 Aligned_cols=118 Identities=20% Similarity=0.184 Sum_probs=81.2
Q ss_pred CCeEEEEEEcCCCCCeEEEEecCCCC--ccchHH---HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCC
Q 018750 23 NGIKIFYRTYGRGPTKVILITGLAGT--HDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (351)
Q Consensus 23 ~g~~l~y~~~g~~~p~vv~~HG~~~~--~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (351)
-|.+|.....+.+.|+|+|+||.++. ...|.. +.+.+.+ .++.|+.+|-...+
T Consensus 16 ~~r~i~~~~~~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~----------------------~~~ivV~P~~~~~~ 73 (280)
T d1dqza_ 16 MGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQ----------------------SGLSVIMPVGGQSS 73 (280)
T ss_dssp TTEEEEEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTT----------------------SSSEEEEECCCTTC
T ss_pred CCCcceEEeeCCCCCEEEECCCCCCCCccchhhhcchHHHHHHh----------------------CCcEEEEECCCCCC
Confidence 36777777777777899999998764 345543 3344554 69999999953222
Q ss_pred CCCC-------CCCCCccchHh-HHHHHHHHHHHh---CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCC
Q 018750 98 RSSV-------PVKKTEYTTKI-MAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (351)
Q Consensus 98 ~S~~-------~~~~~~~~~~~-~~~dl~~~l~~~---~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (351)
.... ........+++ +++++...++.. ..+++.+.|+||||..|+.+|.++|+++.+++.+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~ 149 (280)
T d1dqza_ 74 FYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp TTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred cCccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCcc
Confidence 1110 00011223433 456777777653 34578999999999999999999999999999999863
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.16 E-value=4.5e-09 Score=87.19 Aligned_cols=63 Identities=11% Similarity=-0.018 Sum_probs=46.0
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHh----------CCCceEEEcCC-CccccccCh--HHHHHHHHHHHHhcCC
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKL----------YPVARMIDLPG-GHLVSHERT--EEVNQALIDLIKASEK 323 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~----------~~~~~~~~~~g-gH~~~~~~p--~~~~~~i~~fl~~~~~ 323 (351)
..|+|++||++|..||...+.++.+.| ...++++++++ ||.+.-... .+....+.+||++..+
T Consensus 200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~ 275 (280)
T d1qfma2 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 275 (280)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999999998887 23467899998 996532222 2333456788877543
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.07 E-value=1.5e-09 Score=94.85 Aligned_cols=122 Identities=12% Similarity=-0.033 Sum_probs=80.5
Q ss_pred ccccCCeEEEEEEc---CCCC-CeEEEEecCCCCc------------cchHHHHHHhcCCCCCCCCchhhhcccccCCCC
Q 018750 19 ALNDNGIKIFYRTY---GRGP-TKVILITGLAGTH------------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82 (351)
Q Consensus 19 ~~~~~g~~l~y~~~---g~~~-p~vv~~HG~~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (351)
+...||++|+...+ +.++ |+||+.|+++... .........|++
T Consensus 33 ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~--------------------- 91 (385)
T d2b9va2 33 VPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVE--------------------- 91 (385)
T ss_dssp EECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHH---------------------
T ss_pred EECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHh---------------------
Confidence 34458999987655 3333 6677778774211 011223344555
Q ss_pred CCCeEEEEecCCCCCCCCCCCCCC--------ccchHhHHHHHHHHHHHh----CC--cceEEEEEchhhHHHHHHHHhC
Q 018750 83 GAGIEVCAFDNRGMGRSSVPVKKT--------EYTTKIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 83 ~~g~~vi~~D~~G~G~S~~~~~~~--------~~~~~~~~~dl~~~l~~~----~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
+||.|+.+|.||+|.|...-... .+. .+.++|..++++.+ .. .+|.++|+|+||.+++.+|...
T Consensus 92 -~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~-~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~ 169 (385)
T d2b9va2 92 -GGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTK-TDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDP 169 (385)
T ss_dssp -TTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSS-CCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSC
T ss_pred -CCcEEEEEcCCcccCCCCceeeccccccccccch-hhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhcc
Confidence 79999999999999998643211 111 12245555555443 22 4799999999999999999998
Q ss_pred CcccceEEEeccCCC
Q 018750 149 PERVLSLALLNVTGG 163 (351)
Q Consensus 149 p~~v~~lvl~~~~~~ 163 (351)
|..+++++..++...
T Consensus 170 ~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 170 HPALKVAAPESPMVD 184 (385)
T ss_dssp CTTEEEEEEEEECCC
T ss_pred CCcceEEEEeccccc
Confidence 888999998877643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.02 E-value=4e-10 Score=94.75 Aligned_cols=109 Identities=14% Similarity=0.221 Sum_probs=71.8
Q ss_pred CCCCeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchH
Q 018750 34 RGPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (351)
Q Consensus 34 ~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (351)
..+|++|++|||.++... +..+...+... .+++||++|+.... +. .-........
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~---------------------~d~NVI~VDW~~~a-~~-~Y~~a~~n~~ 124 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKV---------------------EEVNCICVDWKKGS-QT-SYTQAANNVR 124 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTT---------------------CCEEEEEEECHHHH-SS-CHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhc---------------------CCceEEEEeecccc-Cc-chHHHHHHHH
Confidence 456899999999876643 34445554431 47999999996422 21 1000111234
Q ss_pred hHHHHHHHHHH----HhC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCC
Q 018750 112 IMAKDVIALMD----HLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (351)
Q Consensus 112 ~~~~dl~~~l~----~~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
...+.+.++++ ..+ .++++|||||+||.+|-.++.+. .++.+++.++|+.+.+.
T Consensus 125 ~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~P~F~ 184 (337)
T d1rp1a2 125 VVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVEASFQ 184 (337)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCCTTTT
T ss_pred HHHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHHHhh-ccccceeccCCCccccC
Confidence 44455554444 334 47899999999999998666654 57999999999987654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.99 E-value=5.6e-10 Score=93.68 Aligned_cols=110 Identities=17% Similarity=0.274 Sum_probs=75.6
Q ss_pred CCCeEEEEecCCCCccc--hHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCCccchHh
Q 018750 35 GPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (351)
Q Consensus 35 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (351)
.+|++|++|||.++... +..+.+.+... ..++||++|+...... .-.........
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~---------------------~d~NVi~VDW~~~a~~--~Y~~a~~n~~~ 125 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQV---------------------EKVNCICVDWRRGSRT--EYTQASYNTRV 125 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTT---------------------CCEEEEEEECHHHHSS--CHHHHHHHHHH
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhc---------------------CCceEEEEechhhccc--chHHHHHhHHH
Confidence 46899999999876643 34444444431 4799999999643211 10001123444
Q ss_pred HHHHHHHHHHH----hC--CcceEEEEEchhhHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 018750 113 MAKDVIALMDH----LG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (351)
Q Consensus 113 ~~~dl~~~l~~----~~--~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
..+.+..+++. .+ .++++|||||+||.+|-.++...+.++.+++.++|+.+.+..
T Consensus 126 Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~F~~ 186 (338)
T d1bu8a2 126 VGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCFQG 186 (338)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCcccC
Confidence 55555555543 23 478999999999999999999998899999999999866543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.99 E-value=5e-09 Score=85.56 Aligned_cols=51 Identities=18% Similarity=0.211 Sum_probs=41.2
Q ss_pred HhHHHHHHHHHHHh-----CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 111 KIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 111 ~~~~~dl~~~l~~~-----~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+.+.+++..+++.. ..+++.++|+||||..++.++.++|+++.+++.+++.
T Consensus 102 ~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~ 157 (246)
T d3c8da2 102 LAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGS 157 (246)
T ss_dssp HHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCC
T ss_pred HHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcc
Confidence 33445666666653 2257999999999999999999999999999999986
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=5.1e-08 Score=86.85 Aligned_cols=132 Identities=16% Similarity=0.091 Sum_probs=81.7
Q ss_pred CCeEEEEEEcCC-----CCCeEEEEecCCCCccchHHHHHHhcCCCCCCCCchhhhcccccCC--CCCCCeEEEEecCC-
Q 018750 23 NGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG--DGGAGIEVCAFDNR- 94 (351)
Q Consensus 23 ~g~~l~y~~~g~-----~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~g~~vi~~D~~- 94 (351)
++..|+|+-... .+|+++.+.|.+|++..|..+.+.-.-. ++++. ..+... ---+-.+++.+|.|
T Consensus 30 ~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~---v~~~~----~~~~~N~~SW~~~anllfIDqPv 102 (452)
T d1ivya_ 30 GSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFL---VQPDG----VTLEYNPYSWNLIANVLYLESPA 102 (452)
T ss_dssp TTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEE---ECTTS----SCEEECTTCGGGSSEEEEECCST
T ss_pred CCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcE---EcCCC----CeeccCCcchhcccCEEEEecCC
Confidence 466788776642 3578999999999998875544321000 00000 000000 00024689999976
Q ss_pred CCCCCCCCCCCCccchHhHHHHHHHHHHH----h---CCcceEEEEEchhhHHHHHHHHhC----CcccceEEEeccC
Q 018750 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDH----L---GWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVT 161 (351)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~----~---~~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~lvl~~~~ 161 (351)
|.|.|.........+..+.+.|+.+++.. . ...+++|.|.|+||..+-.+|... .-.++++++.++.
T Consensus 103 GtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 103 GVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp TSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 99999654432334555666666555543 2 335899999999999888877542 2358999998875
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.84 E-value=1.2e-06 Score=76.96 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=81.8
Q ss_pred CeEEEEEEcC-----CCCCeEEEEecCCCCccchHHHHHH----------hcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 018750 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKG----------LAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (351)
Q Consensus 24 g~~l~y~~~g-----~~~p~vv~~HG~~~~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (351)
+..|+|+-.. ..+|.||.+.|.+|++..|..+.+. +..+-.+++ +-.++
T Consensus 27 ~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~----------------~~anl 90 (421)
T d1wpxa1 27 DKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWN----------------SNATV 90 (421)
T ss_dssp CCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGG----------------GSSEE
T ss_pred CceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccc----------------cccCE
Confidence 5678876443 2458899999999999887655531 111111111 24689
Q ss_pred EEecC-CCCCCCCCCCCCCccchHhHHHHHHHHHHHh---------CCcceEEEEEchhhHHHHHHHHhC------Cccc
Q 018750 89 CAFDN-RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---------GWKQAHVFGHSMGAMIACKLAAMV------PERV 152 (351)
Q Consensus 89 i~~D~-~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---------~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v 152 (351)
+.+|. -|.|.|..... ...+..+.++|+.+++... ...+++|.|-|+||..+-.+|... +-.+
T Consensus 91 lfiD~PvGtGfSy~~~~-~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inl 169 (421)
T d1wpxa1 91 IFLDQPVNVGFSYSGSS-GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNL 169 (421)
T ss_dssp EEECCSTTSTTCBCSSC-CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCC
T ss_pred EEEecCCCCCceecCCc-cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcce
Confidence 99995 59999965443 2445566677777666432 235899999999999888777542 2247
Q ss_pred ceEEEeccCC
Q 018750 153 LSLALLNVTG 162 (351)
Q Consensus 153 ~~lvl~~~~~ 162 (351)
+++++.++..
T Consensus 170 kGi~iGng~~ 179 (421)
T d1wpxa1 170 TSVLIGNGLT 179 (421)
T ss_dssp CEEEEESCCC
T ss_pred eeeEecCCcc
Confidence 7999988764
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.55 E-value=6.7e-08 Score=82.88 Aligned_cols=95 Identities=21% Similarity=0.261 Sum_probs=70.4
Q ss_pred eEEEEecCCCCc-------cchHH----HHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 018750 38 KVILITGLAGTH-------DAWGP----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (351)
Q Consensus 38 ~vv~~HG~~~~~-------~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 106 (351)
+|||+||+.+-. ..|.. +.+.|.+ +|++|++.....
T Consensus 9 PIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~----------------------~G~~V~~~~V~p----------- 55 (388)
T d1ku0a_ 9 PIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLND----------------------NGYRTYTLAVGP----------- 55 (388)
T ss_dssp CEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHH----------------------TTCCEEECCCCS-----------
T ss_pred CEEEeCCcccCCccccCcccccCCchhhhHHHHHh----------------------CCCEEEEeccCC-----------
Confidence 599999986532 34543 6677766 699999998752
Q ss_pred ccchHhHHHHHHHHHHHh----CC-------------------------cceEEEEEchhhHHHHHHHHhCCc-------
Q 018750 107 EYTTKIMAKDVIALMDHL----GW-------------------------KQAHVFGHSMGAMIACKLAAMVPE------- 150 (351)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~----~~-------------------------~~v~lvG~S~Gg~~a~~~a~~~p~------- 150 (351)
.-+.++-++++...|+.. |. +||+||||||||..+-.++...|+
T Consensus 56 ~~S~~~RA~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~ 135 (388)
T d1ku0a_ 56 LSSNWDRACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEERE 135 (388)
T ss_dssp SBCHHHHHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccc
Confidence 236677777777777632 21 489999999999999988875543
Q ss_pred ------------------ccceEEEeccCCCCC
Q 018750 151 ------------------RVLSLALLNVTGGGF 165 (351)
Q Consensus 151 ------------------~v~~lvl~~~~~~~~ 165 (351)
.|++|+.++++..+.
T Consensus 136 ~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 136 YAKEHNVSLSPLFEGGHRFVLSVTTIATPHDGT 168 (388)
T ss_dssp HHHHHTCCCCGGGTCCCCCEEEEEEESCCTTCC
T ss_pred cccccccccccccccCCcceEEEEeccCCCCCc
Confidence 699999999886554
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.53 E-value=1.1e-06 Score=73.18 Aligned_cols=103 Identities=18% Similarity=0.123 Sum_probs=64.7
Q ss_pred CeEEEEecCCCCccchHHH---HHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCCC----------------CC
Q 018750 37 TKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG----------------MG 97 (351)
Q Consensus 37 p~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G----------------~G 97 (351)
|+|.++||.+++...|... .....+ .+..|+.++... .+
T Consensus 50 PVLYlLhG~~~~~~~w~~~~~~~~~~~~----------------------~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~ 107 (299)
T d1pv1a_ 50 PTVFYLSGLTCTPDNASEKAFWQFQADK----------------------YGFAIVFPDTSPRGDEVANDPEGSWDFGQG 107 (299)
T ss_dssp CEEEEECCTTCCHHHHHHHSCHHHHHHH----------------------HTCEEEECCSSCCSTTSCCCTTCCSSSSSS
T ss_pred CEEEEcCCCCCCHHHHHHhhhHHHHHHH----------------------cCCceecCCCcccccccCCcccccccccCC
Confidence 7899999999988877432 222222 367777776422 11
Q ss_pred CCCCCCCC-----CccchHh-HHHHHHHHHHHh-CC---------cceEEEEEchhhHHHHHHHHh--CCcccceEEEec
Q 018750 98 RSSVPVKK-----TEYTTKI-MAKDVIALMDHL-GW---------KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLN 159 (351)
Q Consensus 98 ~S~~~~~~-----~~~~~~~-~~~dl~~~l~~~-~~---------~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~ 159 (351)
.+...... ..+.+++ +++++..+++.. .. ++..|.|+||||.-|+.+|.+ +|++..+++.++
T Consensus 108 ~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s 187 (299)
T d1pv1a_ 108 AGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFA 187 (299)
T ss_dssp CCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEES
T ss_pred CccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeecc
Confidence 11111100 0112233 445666666543 21 358999999999999999986 488898888888
Q ss_pred cC
Q 018750 160 VT 161 (351)
Q Consensus 160 ~~ 161 (351)
+.
T Consensus 188 ~~ 189 (299)
T d1pv1a_ 188 PI 189 (299)
T ss_dssp CC
T ss_pred Cc
Confidence 75
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.51 E-value=5.7e-07 Score=75.22 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=35.1
Q ss_pred CccEEEEeecCCccCCHHHHHHHHHHhC---C--CceEEEcCC-Cccccc
Q 018750 261 GFLVSVIHGRHDVIAQICYARRLAEKLY---P--VARMIDLPG-GHLVSH 304 (351)
Q Consensus 261 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~---~--~~~~~~~~g-gH~~~~ 304 (351)
+.|++++||.+|..|++..++.+.+.+. + +.+++..++ ||...-
T Consensus 90 ~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 4699999999999999999999998773 2 345566677 996653
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.50 E-value=3.7e-07 Score=74.87 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=27.2
Q ss_pred cceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 127 KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 127 ~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
+++.++|+|+||..++.++.. ++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 468899999999999987665 5567888877764
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.41 E-value=1.1e-06 Score=72.30 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=33.9
Q ss_pred CCcceEEEEEchhhHHHHHHHHhCCcccceEEEeccC
Q 018750 125 GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (351)
Q Consensus 125 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (351)
..+++.+.|+||||..++.+|.++|+.+.+++.+++.
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~ 178 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 178 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred CccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcc
Confidence 3457999999999999999999999999999999976
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.39 E-value=3.2e-05 Score=68.76 Aligned_cols=111 Identities=15% Similarity=0.085 Sum_probs=72.5
Q ss_pred CCeEEEEecCCCCccchHHHHHH----------hcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC-CCCCCCCCCC
Q 018750 36 PTKVILITGLAGTHDAWGPQLKG----------LAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-GMGRSSVPVK 104 (351)
Q Consensus 36 ~p~vv~~HG~~~~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~-G~G~S~~~~~ 104 (351)
+|+||.+.|.+|++..+..+.+. |..+-.+++ +-.+++.+|.| |.|.|.....
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn----------------~~an~lfIDqPvGvGfSy~~~~ 130 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWI----------------SKGDLLFIDQPTGTGFSVEQNK 130 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGG----------------GTSEEEEECCSTTSTTCSSCCS
T ss_pred CCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCccc----------------ccCCEEEEeCCCCcCeeecCCC
Confidence 48899999999999877554421 111111111 24689999975 9999965432
Q ss_pred --------CCccchHhHHHHHHHHHHHh-------CCcceEEEEEchhhHHHHHHHHhC------------CcccceEEE
Q 018750 105 --------KTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV------------PERVLSLAL 157 (351)
Q Consensus 105 --------~~~~~~~~~~~dl~~~l~~~-------~~~~v~lvG~S~Gg~~a~~~a~~~------------p~~v~~lvl 157 (351)
....+.++.++++..++... ...+++|.|.|+||..+-.+|... +-.++++.+
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~I 210 (483)
T d1ac5a_ 131 DEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLI 210 (483)
T ss_dssp SGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEE
T ss_pred CccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeee
Confidence 12234566777777666542 336899999999999888777543 114788888
Q ss_pred eccCC
Q 018750 158 LNVTG 162 (351)
Q Consensus 158 ~~~~~ 162 (351)
.++..
T Consensus 211 GNg~~ 215 (483)
T d1ac5a_ 211 GNGWI 215 (483)
T ss_dssp EEECC
T ss_pred cCCcc
Confidence 77653
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.0007 Score=60.65 Aligned_cols=117 Identities=12% Similarity=0.053 Sum_probs=71.7
Q ss_pred CCeEEEEEEcC--C---CCCeEEEEecCCC---CccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 23 NGIKIFYRTYG--R---GPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 23 ~g~~l~y~~~g--~---~~p~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
|-..|..+.-. . +-|++|++||.+. +...+... ...+. ++.-|+.+++|
T Consensus 95 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~-~~~~~----------------------~~vIvVt~nYR 151 (532)
T d2h7ca1 95 DCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL-ALAAH----------------------ENVVVVTIQYR 151 (532)
T ss_dssp CCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH-HHHHH----------------------HTCEEEEECCC
T ss_pred cCCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCch-hhhhc----------------------CceEEEEEeec
Confidence 44556665532 1 2378999999753 33333221 22233 47889999988
Q ss_pred ----CCCCCCCCCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHh--CCcccceEEEeccCC
Q 018750 95 ----GMGRSSVPVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (351)
Q Consensus 95 ----G~G~S~~~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 162 (351)
|+-.+........+-+.|+...|.-+-+ ..|- ++|.|+|+|.||..+...+.. ....+.++|+.++..
T Consensus 152 Lg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 152 LGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp CHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cCCCccccccccccccccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 4433322222245666666665554444 4453 579999999999887776553 234689999999764
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=96.91 E-value=0.0011 Score=59.34 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=51.5
Q ss_pred CCeEEEEecCC----CCCCCC-CCCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHhC--Ccc
Q 018750 84 AGIEVCAFDNR----GMGRSS-VPVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMV--PER 151 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~-~~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~ 151 (351)
++.-|+.+++| |+-... .......+-+.|++..|.-+-+ .+|- ++|.|+|+|.||..+....... ...
T Consensus 136 ~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~l 215 (532)
T d1ea5a_ 136 EEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDL 215 (532)
T ss_dssp HTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTT
T ss_pred cCccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhh
Confidence 47889999988 343322 1112235566666665554444 4443 5799999999998877665531 246
Q ss_pred cceEEEeccCC
Q 018750 152 VLSLALLNVTG 162 (351)
Q Consensus 152 v~~lvl~~~~~ 162 (351)
+.++|+.++..
T Consensus 216 F~~aI~~Sg~~ 226 (532)
T d1ea5a_ 216 FRRAILQSGSP 226 (532)
T ss_dssp CSEEEEESCCT
T ss_pred hhhheeecccc
Confidence 99999998764
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.90 E-value=0.0013 Score=59.06 Aligned_cols=79 Identities=14% Similarity=0.027 Sum_probs=52.0
Q ss_pred CCeEEEEecCC----CCCCCCC-CCCCCccchHhHHHHHHHHH---HHhCC--cceEEEEEchhhHHHHHHHHhC--Ccc
Q 018750 84 AGIEVCAFDNR----GMGRSSV-PVKKTEYTTKIMAKDVIALM---DHLGW--KQAHVFGHSMGAMIACKLAAMV--PER 151 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~~-~~~~~~~~~~~~~~dl~~~l---~~~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~ 151 (351)
++.-|+.+++| |+-.+.. ......+-+.|+...|.-+- ..+|- ++|.|+|+|.||..+..+.... ...
T Consensus 142 ~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~L 221 (542)
T d2ha2a1 142 EGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL 221 (542)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTT
T ss_pred ccceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHH
Confidence 37889999998 5433221 11223555666665555444 44453 4799999999999888766542 246
Q ss_pred cceEEEeccCC
Q 018750 152 VLSLALLNVTG 162 (351)
Q Consensus 152 v~~lvl~~~~~ 162 (351)
+.++|+.++..
T Consensus 222 F~~aI~~SG~~ 232 (542)
T d2ha2a1 222 FHRAVLQSGTP 232 (542)
T ss_dssp CSEEEEESCCS
T ss_pred hhhheeecccc
Confidence 89999998764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=96.79 E-value=0.0015 Score=57.62 Aligned_cols=78 Identities=19% Similarity=0.157 Sum_probs=51.2
Q ss_pred CeEEEEecCC----CCCCCCC--CCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHhC--Ccc
Q 018750 85 GIEVCAFDNR----GMGRSSV--PVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMV--PER 151 (351)
Q Consensus 85 g~~vi~~D~~----G~G~S~~--~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~~--p~~ 151 (351)
+.-|+.+++| |+=.... ......+-+.|++..+.-+-+ ..|- ++|.|+|+|.||..+...+... ...
T Consensus 127 ~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gL 206 (483)
T d1qe3a_ 127 EVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGL 206 (483)
T ss_dssp TCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS
T ss_pred ceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCc
Confidence 6889999988 4422111 111235666676665554444 4443 5799999999999887765432 246
Q ss_pred cceEEEeccCC
Q 018750 152 VLSLALLNVTG 162 (351)
Q Consensus 152 v~~lvl~~~~~ 162 (351)
+.++|+.++..
T Consensus 207 F~raI~~SGs~ 217 (483)
T d1qe3a_ 207 FQKAIMESGAS 217 (483)
T ss_dssp CSEEEEESCCC
T ss_pred ceeeccccCCc
Confidence 99999999864
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0034 Score=55.92 Aligned_cols=79 Identities=15% Similarity=0.049 Sum_probs=50.5
Q ss_pred CCeEEEEecCC----CCCCC-CCCCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHh--CCcc
Q 018750 84 AGIEVCAFDNR----GMGRS-SVPVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAM--VPER 151 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S-~~~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~ 151 (351)
.+.-|+.+++| |+-.. ........+-+.|+...|.-+-+ ..|- ++|.|+|+|.||..+...... ....
T Consensus 134 ~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~l 213 (526)
T d1p0ia_ 134 ERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSL 213 (526)
T ss_dssp HCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGG
T ss_pred cceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhh
Confidence 37889999988 33222 11122235566666665554444 4443 579999999999987655442 2346
Q ss_pred cceEEEeccCC
Q 018750 152 VLSLALLNVTG 162 (351)
Q Consensus 152 v~~lvl~~~~~ 162 (351)
+.++|+.++..
T Consensus 214 f~~aI~~Sg~~ 224 (526)
T d1p0ia_ 214 FTRAILQSGSF 224 (526)
T ss_dssp CSEEEEESCCT
T ss_pred hhhhhcccccc
Confidence 88999988764
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.63 E-value=0.0031 Score=56.92 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=52.1
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHh--CCcccc
Q 018750 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAM--VPERVL 153 (351)
Q Consensus 85 g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~--~p~~v~ 153 (351)
+.-|+.+++| |+-.+........+-+.|+...+.-+-+. +|- ++|.|+|+|.||..+...... ....+.
T Consensus 135 ~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~ 214 (579)
T d2bcea_ 135 NVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIK 214 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCS
T ss_pred CEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccc
Confidence 5788999988 44332222222456677777666555544 443 579999999999888765543 235699
Q ss_pred eEEEeccCC
Q 018750 154 SLALLNVTG 162 (351)
Q Consensus 154 ~lvl~~~~~ 162 (351)
++|+.++..
T Consensus 215 raI~~SGs~ 223 (579)
T d2bcea_ 215 RAISQSGVG 223 (579)
T ss_dssp EEEEESCCT
T ss_pred cceeccCCc
Confidence 999999764
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.52 E-value=0.004 Score=55.31 Aligned_cols=119 Identities=13% Similarity=-0.005 Sum_probs=68.3
Q ss_pred CCeEEEEEEcC-----CCCCeEEEEecCC---CCccchHHHHHHhcCCCCCCCCchhhhcccccCCCCCCCeEEEEecCC
Q 018750 23 NGIKIFYRTYG-----RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (351)
Q Consensus 23 ~g~~l~y~~~g-----~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (351)
|-..|..+.-. ++-|++|++||.+ |+...+..-...++.. ++.-|+.+++|
T Consensus 79 DCL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~---------------------~~vVvVt~nYR 137 (517)
T d1ukca_ 79 DCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASD---------------------DVIVFVTFNYR 137 (517)
T ss_dssp CCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTT---------------------SCCEEEEECCC
T ss_pred cCCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhc---------------------cccceEEEEec
Confidence 44556655522 1228999999975 2333333222222220 36788999988
Q ss_pred ----CCCCCCC--CCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHh----CCcccceEEEec
Q 018750 95 ----GMGRSSV--PVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAM----VPERVLSLALLN 159 (351)
Q Consensus 95 ----G~G~S~~--~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~----~p~~v~~lvl~~ 159 (351)
|+=.+.. ......+-+.|++..+.-+-+ .+|- ++|.|+|+|.||..+...... ....+.++|+.+
T Consensus 138 lg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qS 217 (517)
T d1ukca_ 138 VGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVES 217 (517)
T ss_dssp CHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEES
T ss_pred ccceeecCccccccccccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecc
Confidence 3322211 011135556666655554444 4443 579999999999877654432 123699999998
Q ss_pred cCC
Q 018750 160 VTG 162 (351)
Q Consensus 160 ~~~ 162 (351)
+..
T Consensus 218 g~~ 220 (517)
T d1ukca_ 218 SFW 220 (517)
T ss_dssp CCC
T ss_pred ccc
Confidence 764
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.45 E-value=0.0059 Score=54.43 Aligned_cols=118 Identities=14% Similarity=0.011 Sum_probs=68.3
Q ss_pred CCeEEEEEEcC-----CCCCeEEEEecCCC---Cccch--HHHHH--HhcCCCCCCCCchhhhcccccCCCCCCCeEEEE
Q 018750 23 NGIKIFYRTYG-----RGPTKVILITGLAG---THDAW--GPQLK--GLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (351)
Q Consensus 23 ~g~~l~y~~~g-----~~~p~vv~~HG~~~---~~~~~--~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (351)
|-..|..+.-. ++.|++|+|||.+. +...| ..+.. .+.. ++.-|+.
T Consensus 96 DCL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~----------------------~~vIvVt 153 (534)
T d1llfa_ 96 DCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMG----------------------KPIIHVA 153 (534)
T ss_dssp CCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTT----------------------CCCEEEE
T ss_pred cCCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhcc----------------------CCeEEEE
Confidence 34466666532 23478999999763 23333 22332 2333 5889999
Q ss_pred ecCC----CCCCCC--CCCCCCccchHhHHHHHHHHH---HHhCC--cceEEEEEchhhHHHHHHHH-hC----C---cc
Q 018750 91 FDNR----GMGRSS--VPVKKTEYTTKIMAKDVIALM---DHLGW--KQAHVFGHSMGAMIACKLAA-MV----P---ER 151 (351)
Q Consensus 91 ~D~~----G~G~S~--~~~~~~~~~~~~~~~dl~~~l---~~~~~--~~v~lvG~S~Gg~~a~~~a~-~~----p---~~ 151 (351)
+++| |+-... .......+-+.|++..+.-+- ...|- ++|.|+|+|.||..+..... .. | ..
T Consensus 154 ~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gL 233 (534)
T d1llfa_ 154 VNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPL 233 (534)
T ss_dssp ECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEES
T ss_pred eecCCCcccccCCcccccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhh
Confidence 9998 333221 000012455566665544444 44443 57999999999986654443 21 1 24
Q ss_pred cceEEEeccCC
Q 018750 152 VLSLALLNVTG 162 (351)
Q Consensus 152 v~~lvl~~~~~ 162 (351)
+.++|+.++..
T Consensus 234 F~raI~qSGs~ 244 (534)
T d1llfa_ 234 FRAGIMQSGAM 244 (534)
T ss_dssp CSEEEEESCCS
T ss_pred hhhhhhccCcc
Confidence 89999999754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.45 E-value=0.0049 Score=55.16 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=50.6
Q ss_pred CCeEEEEecCC----CCCCCCC--CCCCCccchHhHHHHHHHHHH---HhCC--cceEEEEEchhhHHHHHHHHhC----
Q 018750 84 AGIEVCAFDNR----GMGRSSV--PVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMV---- 148 (351)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~~--~~~~~~~~~~~~~~dl~~~l~---~~~~--~~v~lvG~S~Gg~~a~~~a~~~---- 148 (351)
++.-|+.+++| |+-.+.. ......+-+.|+...+.-+-+ ..|- ++|.|+|+|.||..+...+...
T Consensus 155 ~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~ 234 (544)
T d1thga_ 155 QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDN 234 (544)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCC
T ss_pred CCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCc
Confidence 47899999998 4433211 000134556666655554444 4443 5799999999998776555421
Q ss_pred ----CcccceEEEeccCCC
Q 018750 149 ----PERVLSLALLNVTGG 163 (351)
Q Consensus 149 ----p~~v~~lvl~~~~~~ 163 (351)
...+.++|+.++...
T Consensus 235 ~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 235 TYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp EETTEESCSEEEEESCCCC
T ss_pred ccchhhhhccccccccccc
Confidence 246899999998643
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.88 E-value=0.0087 Score=53.77 Aligned_cols=78 Identities=18% Similarity=0.069 Sum_probs=48.9
Q ss_pred CeEEEEecCC----CCCCCC-------CCCCCCccchHhHHHHHHHHHHH---hCC--cceEEEEEchhhHHHHHHHHhC
Q 018750 85 GIEVCAFDNR----GMGRSS-------VPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 85 g~~vi~~D~~----G~G~S~-------~~~~~~~~~~~~~~~dl~~~l~~---~~~--~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
+.-|+++++| |+=... .......+-+.|++..|.-+-+. +|- ++|.|+|+|.||..+.......
T Consensus 170 ~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp 249 (571)
T d1dx4a_ 170 NVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP 249 (571)
T ss_dssp TCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT
T ss_pred CeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccc
Confidence 5777888887 322110 11111355666666665555444 443 5799999999999887665432
Q ss_pred --CcccceEEEeccCC
Q 018750 149 --PERVLSLALLNVTG 162 (351)
Q Consensus 149 --p~~v~~lvl~~~~~ 162 (351)
...+.++|+.++..
T Consensus 250 ~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 250 VTRGLVKRGMMQSGTM 265 (571)
T ss_dssp TTTTSCCEEEEESCCT
T ss_pred cccccccccceecccc
Confidence 24688899888754
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=95.75 E-value=0.0062 Score=48.78 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=23.2
Q ss_pred HHHHHHHhCCcceEEEEEchhhHHHHHHHHh
Q 018750 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 117 l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+.++++.....++++.|||+||.+|..+|..
T Consensus 122 i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 122 VLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3344444455689999999999999987754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.74 E-value=0.064 Score=40.40 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=39.8
Q ss_pred hHhHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhCC----cccceEEEeccC
Q 018750 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (351)
Q Consensus 110 ~~~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 161 (351)
..++.+.+.+....-...+++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 79 ~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 4555566666666655579999999999999999887653 578999988743
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=95.73 E-value=0.0065 Score=48.63 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=21.9
Q ss_pred HHHHHhCCcceEEEEEchhhHHHHHHHHh
Q 018750 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 119 ~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
.+++.....++++.|||+||.+|..+|..
T Consensus 125 ~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 125 EQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 33334444689999999999999988764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.67 E-value=0.013 Score=46.61 Aligned_cols=31 Identities=32% Similarity=0.239 Sum_probs=22.8
Q ss_pred HHHHHHHhCCcceEEEEEchhhHHHHHHHHh
Q 018750 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (351)
Q Consensus 117 l~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~ 147 (351)
+..+++.....++++.|||+||.+|..++..
T Consensus 115 i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 3333444444589999999999999987765
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.61 E-value=0.0058 Score=49.11 Aligned_cols=31 Identities=26% Similarity=0.252 Sum_probs=22.7
Q ss_pred HHHHHHhCCcceEEEEEchhhHHHHHHHHhC
Q 018750 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 118 ~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
..++......++++.|||+||.+|..++...
T Consensus 128 ~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 128 KEVVAQNPNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHhCCCceEEEeccchHHHHHHHHHHHH
Confidence 3333333445899999999999999887653
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.53 E-value=0.0085 Score=48.05 Aligned_cols=31 Identities=19% Similarity=0.128 Sum_probs=23.0
Q ss_pred HHHHHHhCCcceEEEEEchhhHHHHHHHHhC
Q 018750 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (351)
Q Consensus 118 ~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 148 (351)
..+++.....++++.|||+||.+|..++...
T Consensus 129 ~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 129 EDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 3333333445899999999999999988753
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=90.71 E-value=0.19 Score=38.11 Aligned_cols=76 Identities=14% Similarity=-0.017 Sum_probs=44.8
Q ss_pred CeEEEEecCCCCCCCCCCCC-CCccchH----hHHHHHHHHHHHhCCcceEEEEEchhhHHHHHHHHhC-----------
Q 018750 85 GIEVCAFDNRGMGRSSVPVK-KTEYTTK----IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV----------- 148 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~-~~~~~~~----~~~~dl~~~l~~~~~~~v~lvG~S~Gg~~a~~~a~~~----------- 148 (351)
+-.+..+++|..-....... ....|.. ++.+.+.+..++-...+++|+|+|.|+.++-.++...
T Consensus 35 ~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~ 114 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTA 114 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCS
T ss_pred CCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCC
Confidence 56778888886533211110 0111223 3333444444444456999999999999998876431
Q ss_pred -------CcccceEEEecc
Q 018750 149 -------PERVLSLALLNV 160 (351)
Q Consensus 149 -------p~~v~~lvl~~~ 160 (351)
.++|.++++++-
T Consensus 115 ~~l~~~~~~~V~avvl~Gd 133 (207)
T d1qoza_ 115 VPLTAGAVSAVKAAIFMGD 133 (207)
T ss_dssp CCSCHHHHHHEEEEEEESC
T ss_pred CCCChhhhhcEEEEEEEeC
Confidence 135788888864
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=89.71 E-value=0.25 Score=37.33 Aligned_cols=62 Identities=15% Similarity=0.028 Sum_probs=35.2
Q ss_pred CeEEEEecCCCCCCCC-CCCCCCccchHhHHHHHH----HHHHHhCCcceEEEEEchhhHHHHHHHH
Q 018750 85 GIEVCAFDNRGMGRSS-VPVKKTEYTTKIMAKDVI----ALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (351)
Q Consensus 85 g~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~dl~----~~l~~~~~~~v~lvG~S~Gg~~a~~~a~ 146 (351)
+-.+..+++|...... ........|..+=+..+. +..++-...+++|+|+|.|+.++-.++.
T Consensus 35 ~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 35 GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred CCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHh
Confidence 4567788887542221 111101123333333333 3333434468999999999999987764
|