BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018751
         (351 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0U822|MON1_PHANO Vacuolar fusion protein MON1 OS=Phaeosphaeria nodorum (strain SN15
           / ATCC MYA-4574 / FGSC 10173) GN=MON1 PE=3 SV=1
          Length = 722

 Score = 34.7 bits (78), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 234 VQIMFPVEPPVVCEFDWEFDEVDEFTDKLVEEEALAEDQKDAFKDFV 280
            Q MFP +P     F+ EFDEVDE +     EEA+    +   K F+
Sbjct: 154 AQSMFPPDPQFDAAFNREFDEVDEMSVDGSNEEAVMRQWRAKLKHFL 200


>sp|A2QCU8|SCONB_ASPNC Probable E3 ubiquitin ligase complex SCF subunit sconB
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=sconB PE=3 SV=1
          Length = 670

 Score = 31.6 bits (70), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 16  AAAKASSSSQENHKEEDEQQKTSKAHRAKRVKASKPETEPEYFEDQ-RNMEDLWKEVFPV 74
           A+  A SS     K E  +++T+   R  +  A +PE   +YF+ + R  ++++K+ F V
Sbjct: 264 ASPVADSSGTGKRKPEPSEEETAVVKRHCQSLAMRPEGSEDYFKTRYRPWKEVYKDRFKV 323

Query: 75  GTEW 78
           GT W
Sbjct: 324 GTNW 327


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.384 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,135,219
Number of Sequences: 539616
Number of extensions: 5703533
Number of successful extensions: 36709
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 35557
Number of HSP's gapped (non-prelim): 1220
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)