Query 018752
Match_columns 351
No_of_seqs 425 out of 2416
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 05:31:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018752.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018752hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 100.0 5.2E-29 1.8E-33 218.2 12.9 140 33-178 5-145 (172)
2 3oi8_A Uncharacterized protein 99.9 2E-27 6.9E-32 204.7 14.7 139 34-178 2-141 (156)
3 3ocm_A Putative membrane prote 99.9 7.1E-27 2.4E-31 206.1 12.9 154 51-293 13-167 (173)
4 3lv9_A Putative transporter; C 99.9 6.2E-26 2.1E-30 192.6 12.5 124 53-178 2-126 (148)
5 3oco_A Hemolysin-like protein 99.9 1E-25 3.5E-30 192.8 7.6 120 57-178 3-124 (153)
6 3kxr_A Magnesium transporter, 99.9 2.1E-22 7.3E-27 182.5 18.6 128 35-178 25-155 (205)
7 3lfr_A Putative metal ION tran 99.9 3.1E-23 1.1E-27 174.3 11.0 104 73-178 2-108 (136)
8 3jtf_A Magnesium and cobalt ef 99.9 1.2E-22 4.2E-27 168.9 13.8 106 71-178 2-107 (129)
9 3k6e_A CBS domain protein; str 99.9 4.2E-23 1.5E-27 179.0 9.9 111 64-178 4-123 (156)
10 3hf7_A Uncharacterized CBS-dom 99.9 1E-22 3.5E-27 170.0 11.1 104 73-178 1-108 (130)
11 3i8n_A Uncharacterized protein 99.9 9.2E-23 3.2E-27 169.6 10.2 107 70-178 2-110 (130)
12 3nqr_A Magnesium and cobalt ef 99.9 4.8E-22 1.6E-26 164.6 12.3 105 72-178 1-107 (127)
13 4esy_A CBS domain containing m 99.9 6.5E-22 2.2E-26 172.2 12.3 112 61-178 7-144 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 1.9E-20 6.6E-25 176.3 13.8 135 34-178 90-238 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 1.1E-19 3.6E-24 184.5 16.6 135 34-178 110-258 (473)
16 2oux_A Magnesium transporter; 99.8 3E-19 1E-23 169.4 16.9 118 55-178 118-240 (286)
17 3ctu_A CBS domain protein; str 99.8 7.9E-20 2.7E-24 155.9 9.4 109 66-178 7-123 (156)
18 4gqw_A CBS domain-containing p 99.8 3.5E-19 1.2E-23 149.7 13.1 105 72-178 3-124 (152)
19 3kpb_A Uncharacterized protein 99.8 2.2E-19 7.5E-24 146.3 10.6 101 74-178 1-101 (122)
20 3sl7_A CBS domain-containing p 99.8 2.7E-19 9.4E-24 155.0 11.5 104 73-178 3-137 (180)
21 3lqn_A CBS domain protein; csg 99.8 1.8E-19 6.1E-24 152.5 10.0 106 69-178 10-124 (150)
22 2emq_A Hypothetical conserved 99.8 4.3E-19 1.5E-23 151.0 12.4 110 65-178 2-120 (157)
23 3fhm_A Uncharacterized protein 99.8 2.9E-19 9.9E-24 154.4 10.0 109 68-178 18-132 (165)
24 2ef7_A Hypothetical protein ST 99.8 1.2E-18 4.2E-23 144.2 12.8 103 71-178 1-106 (133)
25 2yzi_A Hypothetical protein PH 99.8 2.7E-18 9.3E-23 143.0 14.3 105 69-178 2-110 (138)
26 3gby_A Uncharacterized protein 99.8 1.3E-18 4.5E-23 143.8 11.6 102 72-178 3-107 (128)
27 2rc3_A CBS domain; in SITU pro 99.8 1.3E-18 4.4E-23 144.7 11.1 103 73-178 4-113 (135)
28 3k2v_A Putative D-arabinose 5- 99.8 8.4E-19 2.9E-23 148.9 9.9 103 74-178 28-134 (149)
29 1yav_A Hypothetical protein BS 99.8 1.2E-18 4.2E-23 149.2 10.6 105 70-178 10-123 (159)
30 2p9m_A Hypothetical protein MJ 99.8 3.6E-18 1.2E-22 141.9 12.7 104 71-178 5-117 (138)
31 2rih_A Conserved protein with 99.8 3E-18 1E-22 143.7 11.9 100 74-178 5-109 (141)
32 4fry_A Putative signal-transdu 99.8 3.2E-18 1.1E-22 146.1 11.9 102 74-178 7-117 (157)
33 1pbj_A Hypothetical protein; s 99.8 4.5E-18 1.5E-22 138.8 11.3 100 74-178 1-104 (125)
34 3fv6_A YQZB protein; CBS domai 99.7 7.7E-18 2.6E-22 144.6 12.5 103 71-178 14-122 (159)
35 1o50_A CBS domain-containing p 99.7 1E-17 3.5E-22 143.3 12.6 103 70-178 12-134 (157)
36 1y5h_A Hypothetical protein RV 99.7 3.9E-18 1.3E-22 141.1 9.6 104 71-178 5-113 (133)
37 2qrd_G Protein C1556.08C; AMPK 99.7 7E-18 2.4E-22 160.6 12.5 122 56-178 3-148 (334)
38 2pfi_A Chloride channel protei 99.7 1E-17 3.5E-22 143.0 12.1 110 66-178 5-129 (164)
39 2nyc_A Nuclear protein SNF4; b 99.7 1.1E-17 3.8E-22 139.5 12.1 105 70-178 4-122 (144)
40 2j9l_A Chloride channel protei 99.7 6.9E-18 2.4E-22 147.0 11.1 106 71-178 8-147 (185)
41 2o16_A Acetoin utilization pro 99.7 8.6E-18 2.9E-22 144.7 11.5 103 72-178 3-117 (160)
42 1pvm_A Conserved hypothetical 99.7 7.1E-18 2.4E-22 148.4 10.6 101 74-178 9-114 (184)
43 2uv4_A 5'-AMP-activated protei 99.7 2.2E-17 7.5E-22 140.5 10.9 102 71-178 20-132 (152)
44 2v8q_E 5'-AMP-activated protei 99.7 7.8E-18 2.7E-22 160.2 7.6 124 52-178 15-157 (330)
45 3t4n_C Nuclear protein SNF4; C 99.7 1.4E-17 4.6E-22 157.9 8.9 125 53-178 8-153 (323)
46 3ddj_A CBS domain-containing p 99.7 1.7E-16 5.8E-21 148.5 13.0 130 34-178 64-195 (296)
47 1vr9_A CBS domain protein/ACT 99.7 4E-16 1.4E-20 141.3 14.7 101 72-178 11-111 (213)
48 3t4n_C Nuclear protein SNF4; C 99.7 3.5E-16 1.2E-20 148.1 13.5 105 70-178 183-301 (323)
49 1zfj_A Inosine monophosphate d 99.7 4.2E-16 1.4E-20 158.1 14.0 131 34-178 54-192 (491)
50 3usb_A Inosine-5'-monophosphat 99.7 7.8E-16 2.7E-20 157.6 14.3 132 33-178 76-215 (511)
51 3kh5_A Protein MJ1225; AMPK, A 99.6 6.4E-16 2.2E-20 142.3 12.1 105 70-178 80-187 (280)
52 3ddj_A CBS domain-containing p 99.6 4.4E-16 1.5E-20 145.7 11.1 104 71-178 153-266 (296)
53 3org_A CMCLC; transporter, tra 99.6 6.8E-17 2.3E-21 169.1 4.9 105 72-178 451-607 (632)
54 3kh5_A Protein MJ1225; AMPK, A 99.6 1.6E-15 5.5E-20 139.6 13.6 101 75-178 4-123 (280)
55 3l2b_A Probable manganase-depe 99.6 5.5E-16 1.9E-20 142.2 9.9 102 73-178 6-225 (245)
56 4fxs_A Inosine-5'-monophosphat 99.6 9.2E-17 3.1E-21 163.9 4.5 132 33-178 52-190 (496)
57 2d4z_A Chloride channel protei 99.6 1.1E-15 3.8E-20 143.1 10.7 60 70-132 9-69 (250)
58 3pc3_A CG1753, isoform A; CBS, 99.6 7.9E-16 2.7E-20 157.6 10.1 103 71-178 381-488 (527)
59 2yzq_A Putative uncharacterize 99.6 2.1E-15 7.3E-20 139.4 11.1 103 72-178 124-260 (282)
60 2yzq_A Putative uncharacterize 99.6 1.7E-15 5.9E-20 140.1 8.2 99 74-178 1-99 (282)
61 2qrd_G Protein C1556.08C; AMPK 99.6 1.3E-14 4.3E-19 138.1 13.5 103 72-178 180-296 (334)
62 1me8_A Inosine-5'-monophosphat 99.6 4E-16 1.4E-20 159.4 2.3 133 33-178 60-202 (503)
63 4avf_A Inosine-5'-monophosphat 99.5 6E-16 2.1E-20 157.7 1.3 131 33-178 51-188 (490)
64 2cu0_A Inosine-5'-monophosphat 99.5 9.1E-16 3.1E-20 155.9 2.3 128 34-178 57-189 (486)
65 2v8q_E 5'-AMP-activated protei 99.5 5.3E-14 1.8E-18 133.7 13.5 102 74-178 190-304 (330)
66 1vrd_A Inosine-5'-monophosphat 99.4 5.2E-14 1.8E-18 143.0 2.0 112 57-178 82-196 (494)
67 4af0_A Inosine-5'-monophosphat 99.3 6.3E-13 2.2E-17 135.4 1.9 110 59-178 128-239 (556)
68 1jcn_A Inosine monophosphate d 99.3 1.5E-13 5E-18 140.5 -4.1 103 75-180 109-216 (514)
69 3ghd_A A cystathionine beta-sy 99.0 9E-10 3.1E-14 83.3 6.6 65 85-152 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.7 1.7E-08 5.7E-13 74.2 6.6 64 86-152 2-70 (70)
71 1vr9_A CBS domain protein/ACT 98.7 9.7E-09 3.3E-13 92.5 5.2 103 73-180 71-174 (213)
72 4esy_A CBS domain containing m 98.5 9.6E-08 3.3E-12 82.3 4.7 41 138-178 17-57 (170)
73 3l2b_A Probable manganase-depe 98.4 1.8E-07 6E-12 85.3 4.6 61 71-134 182-242 (245)
74 3ghd_A A cystathionine beta-sy 98.3 8.1E-07 2.8E-11 66.8 6.4 30 149-178 2-31 (70)
75 3kpb_A Uncharacterized protein 98.3 1E-06 3.6E-11 70.6 6.4 60 72-135 60-119 (122)
76 4fry_A Putative signal-transdu 98.3 7.3E-07 2.5E-11 75.2 5.3 61 71-136 75-135 (157)
77 3fv6_A YQZB protein; CBS domai 98.2 9.9E-07 3.4E-11 74.9 5.6 78 54-135 60-143 (159)
78 3lv9_A Putative transporter; C 98.2 2.5E-06 8.7E-11 71.2 8.0 41 138-178 22-64 (148)
79 1pbj_A Hypothetical protein; s 98.2 8.6E-07 2.9E-11 71.3 4.4 61 70-135 61-121 (125)
80 3fio_A A cystathionine beta-sy 98.2 2.5E-06 8.4E-11 62.3 6.4 31 148-178 1-31 (70)
81 2ef7_A Hypothetical protein ST 98.2 1E-06 3.5E-11 71.9 4.6 59 73-135 66-124 (133)
82 2yzi_A Hypothetical protein PH 98.2 3.1E-06 1.1E-10 69.5 7.3 41 138-178 6-46 (138)
83 3k2v_A Putative D-arabinose 5- 98.2 3.5E-06 1.2E-10 70.6 7.7 40 139-178 28-69 (149)
84 3lfr_A Putative metal ION tran 98.2 2.1E-06 7.3E-11 71.0 6.3 60 71-135 67-126 (136)
85 2d4z_A Chloride channel protei 98.2 2.9E-06 9.8E-11 79.0 7.8 41 138-178 12-52 (250)
86 2rc3_A CBS domain; in SITU pro 98.2 2.1E-06 7.3E-11 70.3 6.0 60 71-135 71-130 (135)
87 2rih_A Conserved protein with 98.2 3.1E-06 1.1E-10 69.9 7.1 58 72-134 69-126 (141)
88 2o16_A Acetoin utilization pro 98.2 3.3E-06 1.1E-10 71.8 7.2 41 138-178 4-44 (160)
89 3lhh_A CBS domain protein; str 98.2 4.1E-06 1.4E-10 72.3 7.9 75 54-135 89-163 (172)
90 1pvm_A Conserved hypothetical 98.2 4.1E-06 1.4E-10 72.8 7.7 61 71-135 72-132 (184)
91 3oco_A Hemolysin-like protein 98.2 3E-06 1E-10 71.4 6.6 75 54-135 68-142 (153)
92 3ctu_A CBS domain protein; str 98.1 3.5E-06 1.2E-10 70.8 7.0 40 139-178 15-56 (156)
93 3jtf_A Magnesium and cobalt ef 98.1 2.3E-06 7.7E-11 70.1 5.6 58 72-134 67-124 (129)
94 4gqw_A CBS domain-containing p 98.1 1.4E-06 4.7E-11 72.2 4.2 61 71-135 82-142 (152)
95 3gby_A Uncharacterized protein 98.1 4.8E-06 1.7E-10 67.8 6.9 41 138-178 4-44 (128)
96 1o50_A CBS domain-containing p 98.1 3E-06 1E-10 71.6 5.6 60 71-135 93-152 (157)
97 3lqn_A CBS domain protein; csg 98.1 3.9E-06 1.3E-10 70.0 6.2 41 138-178 14-56 (150)
98 3nqr_A Magnesium and cobalt ef 98.1 2.8E-06 9.7E-11 69.2 5.2 58 72-134 67-124 (127)
99 3k6e_A CBS domain protein; str 98.1 5.2E-06 1.8E-10 71.1 7.0 39 140-178 16-56 (156)
100 3fhm_A Uncharacterized protein 98.1 4.3E-06 1.5E-10 71.3 6.4 62 70-136 89-150 (165)
101 2p9m_A Hypothetical protein MJ 98.1 5.7E-06 2E-10 67.7 6.9 41 138-178 7-47 (138)
102 3sl7_A CBS domain-containing p 98.1 2.6E-06 8.8E-11 72.9 5.0 62 70-135 94-155 (180)
103 3i8n_A Uncharacterized protein 98.1 4.8E-06 1.6E-10 68.1 6.3 58 72-134 70-127 (130)
104 2uv4_A 5'-AMP-activated protei 98.1 6E-06 2.1E-10 69.3 7.1 61 72-134 85-149 (152)
105 1y5h_A Hypothetical protein RV 98.1 2.9E-06 1E-10 69.2 4.4 60 71-135 71-130 (133)
106 3hf7_A Uncharacterized CBS-dom 98.1 4.3E-06 1.5E-10 68.7 5.4 59 72-135 68-126 (130)
107 1yav_A Hypothetical protein BS 98.1 6.8E-06 2.3E-10 69.4 6.8 41 138-178 13-55 (159)
108 2emq_A Hypothetical conserved 98.0 7.3E-06 2.5E-10 68.7 6.3 41 138-178 10-52 (157)
109 2nyc_A Nuclear protein SNF4; b 98.0 1.2E-05 4.1E-10 66.0 7.3 40 139-178 8-50 (144)
110 2pfi_A Chloride channel protei 98.0 1.2E-05 4.2E-10 67.5 7.4 41 138-178 12-52 (164)
111 3oi8_A Uncharacterized protein 98.0 6.1E-06 2.1E-10 69.9 5.5 56 72-132 101-156 (156)
112 3kxr_A Magnesium transporter, 98.0 5.8E-06 2E-10 74.1 5.2 61 71-135 113-173 (205)
113 1me8_A Inosine-5'-monophosphat 98.0 3.3E-06 1.1E-10 86.1 4.0 100 72-175 159-260 (503)
114 3ocm_A Putative membrane prote 97.9 1.9E-05 6.4E-10 68.7 7.5 41 138-178 35-77 (173)
115 2j9l_A Chloride channel protei 97.9 1.7E-05 5.8E-10 68.1 6.9 40 138-177 10-55 (185)
116 3usb_A Inosine-5'-monophosphat 97.8 3.4E-05 1.1E-09 78.8 8.9 104 71-178 172-277 (511)
117 2yvy_A MGTE, Mg2+ transporter 97.8 2E-05 6.8E-10 73.5 5.1 61 71-135 196-256 (278)
118 3pc3_A CG1753, isoform A; CBS, 97.7 4.1E-05 1.4E-09 78.1 6.9 40 138-177 383-423 (527)
119 2oux_A Magnesium transporter; 97.7 2.8E-05 9.6E-10 73.1 4.5 61 71-135 198-258 (286)
120 3org_A CMCLC; transporter, tra 97.5 7.1E-05 2.4E-09 78.2 5.3 57 75-136 569-625 (632)
121 4avf_A Inosine-5'-monophosphat 97.5 7E-05 2.4E-09 76.1 4.8 102 72-177 145-248 (490)
122 2zy9_A Mg2+ transporter MGTE; 97.4 0.00011 3.7E-09 74.2 5.5 61 71-135 216-276 (473)
123 1vrd_A Inosine-5'-monophosphat 97.3 0.00012 4.2E-09 73.9 4.0 99 73-175 154-255 (494)
124 4fxs_A Inosine-5'-monophosphat 97.3 9.5E-05 3.2E-09 75.2 3.0 61 72-134 147-207 (496)
125 1jcn_A Inosine monophosphate d 97.1 0.00022 7.5E-09 72.5 4.0 98 72-173 171-271 (514)
126 4af0_A Inosine-5'-monophosphat 97.1 0.00019 6.4E-09 73.5 3.1 58 73-134 199-256 (556)
127 2cu0_A Inosine-5'-monophosphat 97.0 0.00048 1.6E-08 69.6 4.6 97 73-177 149-247 (486)
128 1zfj_A Inosine monophosphate d 96.9 0.0032 1.1E-07 63.3 9.4 99 72-174 150-250 (491)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.96 E-value=5.2e-29 Score=218.22 Aligned_cols=140 Identities=24% Similarity=0.438 Sum_probs=94.4
Q ss_pred CCCCHHHHHHHHHhcccccccCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEee
Q 018752 33 VLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVP 112 (351)
Q Consensus 33 ~~~s~eEL~~LI~~~~~es~~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriP 112 (351)
..+|++||+.+++ ++.+.|.|+++|++++++++.|.+++|+++|+|+.+++++++++++. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45678999999999999999999999999999888999999999999 999999999999999
Q ss_pred eeeCCCCcEEEEEEhhhhhcccccC-CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 113 VYSGNPTNIIGLILVKNLLSVDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 113 Vvd~~~~~IVGIVt~kDLl~~~~~~-~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
|++++.++++|+|+.+||+++...+ ..++.++| +++++|++++++.+++..|.+++.+++||+|+
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 145 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE 145 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 9986447899999999999875433 56899998 99999999999999999999999999999998
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=2e-27 Score=204.68 Aligned_cols=139 Identities=20% Similarity=0.356 Sum_probs=127.1
Q ss_pred CCCHHHHHHHHHhcccccccCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeee
Q 018752 34 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 113 (351)
Q Consensus 34 ~~s~eEL~~LI~~~~~es~~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPV 113 (351)
.+|++||+.|++. +.++|.|+++|++++++++.|.+++|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 4799999999983 5678999999999999999999999999999988899999999999 9999999999999999
Q ss_pred eeCCCCcEEEEEEhhhhhccccc-CCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 114 YSGNPTNIIGLILVKNLLSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 114 vd~~~~~IVGIVt~kDLl~~~~~-~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++.++++|+|+.+||+.+... ...++.++| +++++|++++++.+|+..|.+++.+++||+|+
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 141 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVIDE 141 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEECT
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEECC
Confidence 98753589999999999987544 356899996 66899999999999999999999999999998
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.94 E-value=7.1e-27 Score=206.14 Aligned_cols=154 Identities=19% Similarity=0.294 Sum_probs=135.7
Q ss_pred cccCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhh
Q 018752 51 AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL 130 (351)
Q Consensus 51 s~~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDL 130 (351)
+.++|.|+++|++++++++.|.+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 4567999999999999999999999999999988899999999999 999999999999999998654789999999999
Q ss_pred hccccc-CCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEecCCccccccccccCCCCCCCCCCccccccccc
Q 018752 131 LSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKVDNG 209 (351)
Q Consensus 131 l~~~~~-~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (351)
+.+... ...++. |++++++|++++++.+++..|.+++.+++||+|+
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde------------------------------- 138 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE------------------------------- 138 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-------------------------------
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-------------------------------
Confidence 976532 245777 5789999999999999999999999999999998
Q ss_pred cccccccccccccchhhhhccCCCCCCCCccccCCCCccccccCCCCCCCCCCCCCceEEEEeHHHHHHHHHhcccccch
Q 018752 210 VTAAGQNLRNKLESKDAQQTKKVPPATPTFNKRHRGCSYCILDFENGPFPDFPSNDEAVGVITMEDVIEELLQEEILDET 289 (351)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGiiT~~Dvie~l~~~ei~de~ 289 (351)
+|+++||||+.||+++|++ ||.||.
T Consensus 139 ------------------------------------------------------~g~lvGiIT~~Dil~~l~~-~i~de~ 163 (173)
T 3ocm_A 139 ------------------------------------------------------FGAIEGLVTPIDVFEAIAG-EFPDED 163 (173)
T ss_dssp ------------------------------------------------------TCCEEEEECHHHHHHHHHC-CCCCTT
T ss_pred ------------------------------------------------------CCCEEEEEeHHHHHHHHhC-cCCCcc
Confidence 4899999999999999984 999998
Q ss_pred hhhh
Q 018752 290 DEYV 293 (351)
Q Consensus 290 d~~~ 293 (351)
|.+.
T Consensus 164 ~~~~ 167 (173)
T 3ocm_A 164 ELPD 167 (173)
T ss_dssp SCC-
T ss_pred ccHh
Confidence 8754
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.93 E-value=6.2e-26 Score=192.62 Aligned_cols=124 Identities=20% Similarity=0.413 Sum_probs=100.2
Q ss_pred cCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhc
Q 018752 53 KGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 132 (351)
Q Consensus 53 ~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~ 132 (351)
++|.|+++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 46889999999999999999999999999988899999999999 99999999999999999875478999999999998
Q ss_pred ccccC-CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 133 VDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 133 ~~~~~-~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..... ..++.++| ++++++++++++.+++..|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 126 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE 126 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC
Confidence 75433 67899998 99999999999999999999999999999998
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.92 E-value=1e-25 Score=192.84 Aligned_cols=120 Identities=23% Similarity=0.386 Sum_probs=105.9
Q ss_pred CCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeee-eCCCCcEEEEEEhhhhhcccc
Q 018752 57 LTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVY-SGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 57 L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVv-d~~~~~IVGIVt~kDLl~~~~ 135 (351)
|+++|++++++++.|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+||+++..
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6778999999999999999999999878899999999999 99999999999999999 543478999999999997643
Q ss_pred cC-CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 136 RD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 136 ~~-~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.. ..+++++| ++++++++++++.+|+..|.+++.+.+||+|+
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 124 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE 124 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 32 57899998 99999999999999999999999999999998
No 6
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.89 E-value=2.1e-22 Score=182.47 Aligned_cols=128 Identities=9% Similarity=0.095 Sum_probs=115.3
Q ss_pred CCHHHHHHHHHhcccccccCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHc---CCcEe
Q 018752 35 LRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM---GHSRV 111 (351)
Q Consensus 35 ~s~eEL~~LI~~~~~es~~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~---~~sri 111 (351)
+..++.+.++. .+++++++++++++.|.+.+|+++|++ +++++++++|+. ++++.|+++ ++..+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 55666666665 278999999999999999999999996 788999999999 999999997 88999
Q ss_pred eeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 112 PVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 112 PVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
||++++ ++++|+|+.+||+.... ..+++++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~ 155 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHEP--HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDD 155 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSCT--TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT
T ss_pred EEEcCC-CeEEEEEEHHHHHhCCC--cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC
Confidence 999875 89999999999997643 46899999899999999999999999999999999999998
No 7
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.89 E-value=3.1e-23 Score=174.28 Aligned_cols=104 Identities=30% Similarity=0.509 Sum_probs=93.5
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc---cCCcchhhhhccCC
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---RDAVPLRKMIIRRI 149 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~---~~~~~V~dIM~r~v 149 (351)
+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+++.. ....++.++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988899999999999 99999999999999999875478999999999998754 1256899996 568
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++++++.+++..|.+++.+++||+|+
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDE 108 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECT
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 99999999999999999999999999998
No 8
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.89 E-value=1.2e-22 Score=168.91 Aligned_cols=106 Identities=34% Similarity=0.539 Sum_probs=95.8
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 150 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~ 150 (351)
..+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+++......+++++| ++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988999999999999 999999999999999998744789999999999987655567899996 6789
Q ss_pred EecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 151 RVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 151 ~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++++++.+++..|.+++.+++||+|+
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~ 107 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDE 107 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999998
No 9
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.88 E-value=4.2e-23 Score=179.00 Aligned_cols=111 Identities=17% Similarity=0.251 Sum_probs=95.2
Q ss_pred HHHHhhc-CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc------
Q 018752 64 IIAGALE-LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR------ 136 (351)
Q Consensus 64 mI~~~l~-l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~------ 136 (351)
||.+.++ |-..+++++|+|+.+++++++++|+. +|++.|.+++++++||++++ ++++|+|+.+|++++...
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 4444442 44568999999999999999999999 99999999999999999875 899999999999865422
Q ss_pred --CCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 137 --DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 137 --~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...++.++|.++++++++++++.+|++.|.+++ ++||+|+
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~ 123 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEec
Confidence 156899999999999999999999999998775 5999998
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.88 E-value=1e-22 Score=170.02 Aligned_cols=104 Identities=17% Similarity=0.322 Sum_probs=93.7
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC----CcchhhhhccC
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----AVPLRKMIIRR 148 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~----~~~V~dIM~r~ 148 (351)
+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+++...+ ..++.++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988899999999999 9999999999999999976457999999999999876543 24688986 88
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 149 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 149 v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++++++++.++++.|.+++.+++||+|+
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDE 108 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECT
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcC
Confidence 999999999999999999999999999998
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.88 E-value=9.2e-23 Score=169.60 Aligned_cols=107 Identities=22% Similarity=0.336 Sum_probs=93.3
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC--Ccchhhhhcc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIR 147 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~--~~~V~dIM~r 147 (351)
.|.+++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||+.+...+ ..+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 478899999999988889999999999 9999999999999999987547899999999999875432 56899997 7
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 148 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 148 ~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 110 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDE 110 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC
Confidence 7899999999999999999999999999998
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.87 E-value=4.8e-22 Score=164.62 Aligned_cols=105 Identities=30% Similarity=0.510 Sum_probs=93.1
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc--CCcchhhhhccCC
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRI 149 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~--~~~~V~dIM~r~v 149 (351)
++++|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+||++.... ...+++++| +++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCC
Confidence 3678999999877789999999999 999999999999999998754789999999999976532 356899996 668
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++++++.+++..|.+++.+.+||+|+
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 107 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDE 107 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECT
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 89999999999999999999999999997
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.87 E-value=6.5e-22 Score=172.22 Aligned_cols=112 Identities=16% Similarity=0.255 Sum_probs=98.0
Q ss_pred HHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----
Q 018752 61 ETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---- 136 (351)
Q Consensus 61 E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~---- 136 (351)
++..+.+. +.+++|+|||++ +++++++++|+. +|++.|.+++++++||+|++ |+++|+|+.+||++....
T Consensus 7 ~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhcccc
Confidence 44555555 468899999985 788999999999 99999999999999999876 899999999999865321
Q ss_pred ----------------------CCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 137 ----------------------DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 137 ----------------------~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...++.++|.+++++|.+++++.+|+..|.+++++.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~ 144 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD 144 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET
T ss_pred chhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC
Confidence 135789999999999999999999999999999999999987
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.83 E-value=1.9e-20 Score=176.32 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=118.5
Q ss_pred CCCHHHHHHHHHhcccccccC---------CCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHH
Q 018752 34 LLRRAELKTFVNFHGNEAGKG---------GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM 104 (351)
Q Consensus 34 ~~s~eEL~~LI~~~~~es~~~---------G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~ 104 (351)
.++.+++..+++.. .+. |.++..++.++.+++.+.+.+|+++|++ +++++++++++. ++++.|+
T Consensus 90 ~l~~d~~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~ 162 (278)
T 2yvy_A 90 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 162 (278)
T ss_dssp HSCHHHHHHHHHHH----HHHCHHHHHHHHHHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHH
T ss_pred cCCHHHHHHHHHhC----CCccHHHHHHHHHcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHH
Confidence 35667777777632 223 5688999999999999999999999996 788999999999 9999999
Q ss_pred Hc-----CCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 105 TM-----GHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 105 ~~-----~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++ +++++||++++ ++++|+|+.+|++.... ..++.++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 163 ~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 238 (278)
T 2yvy_A 163 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVADP--RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 238 (278)
T ss_dssp HHTTTCSCSSEEEEECTT-CBEEEEEEHHHHHHSCT--TCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HccCCccceeEEEEECCC-CCEEEEEEHHHHhcCCC--CCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC
Confidence 87 78999999875 89999999999987643 56899999899999999999999999999999999999998
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.82 E-value=1.1e-19 Score=184.48 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=121.1
Q ss_pred CCCHHHHHHHHHhcccccccC---------CCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHH
Q 018752 34 LLRRAELKTFVNFHGNEAGKG---------GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM 104 (351)
Q Consensus 34 ~~s~eEL~~LI~~~~~es~~~---------G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~ 104 (351)
.++.+|+..+++.. .++ +.++.++++++.+++.+.+.+|+++|++ +++++++++|+. ++++.|+
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 47788888888742 334 7899999999999999999999999996 889999999999 9999999
Q ss_pred Hc-----CCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 105 TM-----GHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 105 ~~-----~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++ +++++||++++ ++++|+|+.+|++.... +.+++++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~~--~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe 258 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVADP--RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 258 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSCT--TSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCCC--CCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC
Confidence 87 47999999875 89999999999987543 56899999899999999999999999999999999999998
No 16
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.81 E-value=3e-19 Score=169.37 Aligned_cols=118 Identities=17% Similarity=0.171 Sum_probs=108.7
Q ss_pred CCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHc-----CCcEeeeeeCCCCcEEEEEEhhh
Q 018752 55 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKN 129 (351)
Q Consensus 55 G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~-----~~sriPVvd~~~~~IVGIVt~kD 129 (351)
+.|+.+++..+.+++.+.+.+|+++|++ +++++++++++. ++++.|+++ +++++||++++ ++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHH
Confidence 3688889999999999999999999986 788999999999 999999998 88999999875 89999999999
Q ss_pred hhcccccCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 130 LLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 130 Ll~~~~~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++.... ..++.++|.+++++|++++++.+++..|.+++.+.+||+|+
T Consensus 194 ll~~~~--~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 240 (286)
T 2oux_A 194 LIVNDD--DTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY 240 (286)
T ss_dssp HTTSCT--TSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHcCCC--CCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 997643 46899999899999999999999999999999999999997
No 17
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.80 E-value=7.9e-20 Score=155.92 Aligned_cols=109 Identities=15% Similarity=0.198 Sum_probs=95.6
Q ss_pred HHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC--------
Q 018752 66 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-------- 137 (351)
Q Consensus 66 ~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~-------- 137 (351)
.....|...+|+++|+|..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+......
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccc
Confidence 3444577788999999988999999999999 99999999999999999875 8999999999998765321
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..++.++|.++++++.+++++.+++..|.+++ .+||+|+
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~ 123 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC
Confidence 46899999899999999999999999999886 6999987
No 18
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.80 E-value=3.5e-19 Score=149.71 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=93.6
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc----------------
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---------------- 135 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~---------------- 135 (351)
..++|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4678999999877889999999999 99999999999999999875 89999999999986421
Q ss_pred -cCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 136 -RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 136 -~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
....++.++|.++++++++++++.+++..|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~ 124 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS 124 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 1246899999888999999999999999999999999999997
No 19
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.80 E-value=2.2e-19 Score=146.31 Aligned_cols=101 Identities=12% Similarity=0.246 Sum_probs=92.7
Q ss_pred cccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcEec
Q 018752 74 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 153 (351)
Q Consensus 74 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~V~ 153 (351)
++|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++.+......++.++|.+++++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 478999986 678899999999 99999999999999999865 89999999999998765555689999989999999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 154 EDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 154 ~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++.+++..|.+++.+.+||+|+
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~ 101 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDD 101 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECC
Confidence 9999999999999999999999988
No 20
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.79 E-value=2.7e-19 Score=155.01 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=92.9
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc------------------
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD------------------ 134 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~------------------ 134 (351)
.++|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999876889999999999 99999999999999999875 8999999999998532
Q ss_pred -------------ccCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 135 -------------YRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 135 -------------~~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.....++.++|.++++++++++++.+|+..|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 137 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA 137 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 11246799999888999999999999999999999999999997
No 21
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.79 E-value=1.8e-19 Score=152.48 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=94.2
Q ss_pred hcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc---------CCc
Q 018752 69 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAV 139 (351)
Q Consensus 69 l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~---------~~~ 139 (351)
..|..++|+++|+|..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+.+... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3467889999999866789999999999 99999999999999999875 899999999999875431 246
Q ss_pred chhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 140 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 140 ~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++.++|.++++++.+++++.+++..|.+++. +||+|+
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~ 124 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE 124 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECT
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECC
Confidence 8999998999999999999999999999886 999987
No 22
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.79 E-value=4.3e-19 Score=150.98 Aligned_cols=110 Identities=20% Similarity=0.257 Sum_probs=91.9
Q ss_pred HHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc--------
Q 018752 65 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-------- 136 (351)
Q Consensus 65 I~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~-------- 136 (351)
..+...|...+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34556678899999999766788999999999 99999999999999999875 889999999999876432
Q ss_pred -CCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 137 -DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 137 -~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...++.++|.++++++++++++.+++..|.+++. +||+|+
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 2568999998999999999999999999999986 999987
No 23
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=2.9e-19 Score=154.44 Aligned_cols=109 Identities=9% Similarity=0.138 Sum_probs=97.2
Q ss_pred hhcCcccccccccccC-cceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc-----CCcch
Q 018752 68 ALELTEKTAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPL 141 (351)
Q Consensus 68 ~l~l~d~tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~-----~~~~V 141 (351)
...+..++|+++|+|+ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+||+++... ...++
T Consensus 18 ~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v 95 (165)
T 3fhm_A 18 YFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQSV 95 (165)
T ss_dssp CCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSBG
T ss_pred hHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCCH
Confidence 4457889999999974 4678999999999 99999999999999999875 899999999999875322 24689
Q ss_pred hhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 142 RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 142 ~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++|.++++++.+++++.+++..|.+++.+.+||+|+
T Consensus 96 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (165)
T 3fhm_A 96 SVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN 132 (165)
T ss_dssp GGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9999999999999999999999999999999999987
No 24
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.78 E-value=1.2e-18 Score=144.20 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=92.6
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC---Ccchhhhhcc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIR 147 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~---~~~V~dIM~r 147 (351)
|.+.+|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++.....+ ..++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999986 678899999999 999999999999999999 4 7999999999998754322 4689999888
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 148 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 148 ~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++.++++++++.+++..|.+++.+.+||+|+
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 106 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDD 106 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECC
Confidence 9999999999999999999999999999987
No 25
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.78 E-value=2.7e-18 Score=142.97 Aligned_cols=105 Identities=13% Similarity=0.275 Sum_probs=92.8
Q ss_pred hcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhc-cccc---CCcchhhh
Q 018752 69 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR---DAVPLRKM 144 (351)
Q Consensus 69 l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~-~~~~---~~~~V~dI 144 (351)
+.|...+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+||++ .... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 778999999999 99999999999999999865 89999999999973 3322 24689999
Q ss_pred hccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 145 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 145 M~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
|.++++++++++++.+++..|.+++.+.+ |+|+
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~ 110 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE 110 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC
Confidence 98999999999999999999999999999 9997
No 26
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.77 E-value=1.3e-18 Score=143.77 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=92.6
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC---CcchhhhhccC
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIRR 148 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~---~~~V~dIM~r~ 148 (351)
...+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ ++++|+|+.+|++++...+ ..+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46899999986 678899999999 9999999999999999986 7899999999999876543 25699999999
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 149 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 149 v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++.+++++.+++..|.+++.+.+||+|+
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~ 107 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADE 107 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECC
Confidence 999999999999999999999999999987
No 27
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.77 E-value=1.3e-18 Score=144.68 Aligned_cols=103 Identities=10% Similarity=0.173 Sum_probs=90.9
Q ss_pred cc-ccccccccC-cceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhc-cccc----CCcchhhhh
Q 018752 73 EK-TAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR----DAVPLRKMI 145 (351)
Q Consensus 73 d~-tV~dIMtPr-~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~-~~~~----~~~~V~dIM 145 (351)
++ +|+++|+|+ .+++++++++++. ++++.|.+++++++||++ + ++++|+|+.+||++ .... ...++.++|
T Consensus 4 ~m~~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (135)
T 2rc3_A 4 HMKTVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIM 80 (135)
T ss_dssp -CCBHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTS
T ss_pred cceeHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhc
Confidence 45 899999965 5788999999999 999999999999999998 4 78999999999985 2221 256899999
Q ss_pred ccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 146 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 146 ~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 113 (135)
T 2rc3_A 81 TRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD 113 (135)
T ss_dssp BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCeEECCCCcHHHHHHHHHHhCCCEEEEEeC
Confidence 899999999999999999999999999999986
No 28
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.77 E-value=8.4e-19 Score=148.86 Aligned_cols=103 Identities=22% Similarity=0.212 Sum_probs=94.0
Q ss_pred cccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----CCcchhhhhccCC
Q 018752 74 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 149 (351)
Q Consensus 74 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~----~~~~V~dIM~r~v 149 (351)
++|+++|+++.+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+||++.... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999766888999999999 99999999999999999875 899999999999876433 2568999998999
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++.+++++.+++..|.+++.+.+||+|+
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADG 134 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecC
Confidence 99999999999999999999999999998
No 29
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.77 E-value=1.2e-18 Score=149.19 Aligned_cols=105 Identities=19% Similarity=0.308 Sum_probs=92.9
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc---------CCcc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAVP 140 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~---------~~~~ 140 (351)
.+..++|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 577899999999766788999999999 99999999999999999875 799999999999875432 2468
Q ss_pred hhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 141 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 141 V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+.++|.++++++.+++++.+++..|.+++. +||+|+
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 999998899999999999999999998876 999987
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.76 E-value=3.6e-18 Score=141.95 Aligned_cols=104 Identities=13% Similarity=0.277 Sum_probs=92.2
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhh-hccccc---CCcchhhhhc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL-LSVDYR---DAVPLRKMII 146 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDL-l~~~~~---~~~~V~dIM~ 146 (351)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+ +..... ...++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 568899999985 678899999999 99999999999999999875 899999999999 764432 2568999988
Q ss_pred cCCcEecCCCCHHHHHHHHHhCC-----CcEEEEEec
Q 018752 147 RRIPRVSEDMPLYDILNEFQKGH-----SHIAVVYKD 178 (351)
Q Consensus 147 r~v~~V~~~~~L~daL~~m~~~~-----~~~apVVDe 178 (351)
++++++++++++.+++..|.+++ .+.+||+|+
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~ 117 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK 117 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC
Confidence 89999999999999999999999 999999996
No 31
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.76 E-value=3e-18 Score=143.73 Aligned_cols=100 Identities=11% Similarity=0.126 Sum_probs=90.5
Q ss_pred cccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCC--cEEEEEEhhhhhccccc---CCcchhhhhccC
Q 018752 74 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT--NIIGLILVKNLLSVDYR---DAVPLRKMIIRR 148 (351)
Q Consensus 74 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~--~IVGIVt~kDLl~~~~~---~~~~V~dIM~r~ 148 (351)
++|+++|++ +++++++++++. ++++.|.+++++++||++++ + +++|+|+.+||++.... ...++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999985 788999999999 99999999999999999875 6 89999999999876432 246899999899
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 149 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 149 v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++++ ++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~ 109 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNK 109 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECT
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcC
Confidence 9999999 9999999999999999999997
No 32
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.76 E-value=3.2e-18 Score=146.06 Aligned_cols=102 Identities=9% Similarity=0.153 Sum_probs=91.4
Q ss_pred cccccccccC----cceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc-----CCcchhhh
Q 018752 74 KTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKM 144 (351)
Q Consensus 74 ~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~-----~~~~V~dI 144 (351)
.+|+++|+++ .+++++++++++. +|++.|.+++++++||.+ + ++++|+|+.+||+++... ...++.++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6788999999999 999999999999999964 3 789999999999875422 25689999
Q ss_pred hccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 145 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 145 M~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
|.++++++.+++++.+++..|.+++.+.+||+|+
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 117 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG 117 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9899999999999999999999999999999986
No 33
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.75 E-value=4.5e-18 Score=138.83 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=89.6
Q ss_pred cccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----CCcchhhhhccCC
Q 018752 74 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 149 (351)
Q Consensus 74 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~----~~~~V~dIM~r~v 149 (351)
++|+++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|+++.... ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 478999986 778999999999 999999999999999999 4 899999999999865432 2568999988899
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 104 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEED 104 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEEC
Confidence 99999999999999999999999999987
No 34
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.75 E-value=7.7e-18 Score=144.61 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=92.0
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----CCcchhhhhc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMII 146 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~----~~~~V~dIM~ 146 (351)
|..++|+++|++ . +++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+++... ...++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 567899999984 3 4899999999 99999999999999999865 899999999999875421 2568999988
Q ss_pred c--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 147 R--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 147 r--~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+ +++++.+++++.+|+..|.+++.+.+||+|+
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 7 8899999999999999999999999999998
No 35
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.74 E-value=1e-17 Score=143.33 Aligned_cols=103 Identities=20% Similarity=0.240 Sum_probs=92.1
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcE-eeeeeCCCCcEEEEEEhhhhhcccc-------------
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSR-VPVYSGNPTNIIGLILVKNLLSVDY------------- 135 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sr-iPVvd~~~~~IVGIVt~kDLl~~~~------------- 135 (351)
.+..++|+++|++ +++++++++++. ++++.|.++++++ +||++++ +++|+|+.+||+++..
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4778899999985 788999999999 9999999999999 9999874 8999999999987521
Q ss_pred ------cCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 136 ------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 136 ------~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
....++.++|.+ ++++++++++.+|+..|.+++.+.+||+|+
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE 134 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC
Confidence 125689999888 999999999999999999999999999997
No 36
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.74 E-value=3.9e-18 Score=141.14 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=90.5
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhh-ccccc----CCcchhhhh
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL-SVDYR----DAVPLRKMI 145 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl-~~~~~----~~~~V~dIM 145 (351)
+.-++|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++ +.... ...++.++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELA 80 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHh
Confidence 345689999985 678899999999 99999999999999999765 8899999999998 44332 246899999
Q ss_pred ccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 146 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 146 ~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 81 RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 899999999999999999999999999999987
No 37
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.74 E-value=7e-18 Score=160.60 Aligned_cols=122 Identities=12% Similarity=0.153 Sum_probs=104.9
Q ss_pred CCCHHHHHHHHHhhcCc-ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 56 DLTHDETTIIAGALELT-EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 56 ~L~~~E~~mI~~~l~l~-d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.++++|+++++++++|- +.+|+++|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 45678899999999854 599999999999999999999999 9999999999999999997668999999999998643
Q ss_pred c--------cC------Ccchh-------hhhccCC--cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 135 Y--------RD------AVPLR-------KMIIRRI--PRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 135 ~--------~~------~~~V~-------dIM~r~v--~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
. .. ..++. ++|.+++ +++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 148 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDV 148 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC
Confidence 1 11 22332 3467777 99999999999999999999999999998
No 38
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.74 E-value=1e-17 Score=142.97 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=92.5
Q ss_pred HHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeC-CCCcEEEEEEhhhhhcccccC-------
Q 018752 66 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSG-NPTNIIGLILVKNLLSVDYRD------- 137 (351)
Q Consensus 66 ~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~-~~~~IVGIVt~kDLl~~~~~~------- 137 (351)
.+.+.+..++|+++|++ +++++++++++. ++++.|.+++++++||+++ +.++++|+|+.+||+......
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 34566788999999986 678899999999 9999999999999999986 248999999999998754321
Q ss_pred -CcchhhhhccC------CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 -AVPLRKMIIRR------IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 -~~~V~dIM~r~------v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..++.++|.++ ++++.+++++.+++..|.+++.+.+||+|+
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 129 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR 129 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC
Confidence 35788998776 789999999999999999999999999986
No 39
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.74 E-value=1.1e-17 Score=139.47 Aligned_cols=105 Identities=15% Similarity=0.217 Sum_probs=89.9
Q ss_pred cCccccccc---ccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc-----CCcch
Q 018752 70 ELTEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPL 141 (351)
Q Consensus 70 ~l~d~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~-----~~~~V 141 (351)
++-+.++++ +|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...++
T Consensus 4 ~~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v 79 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 79 (144)
T ss_dssp GGGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBH
T ss_pred chhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccH
Confidence 345677888 7863 778999999999 99999999999999999875 899999999999875432 14689
Q ss_pred hhhhcc------CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 142 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 142 ~dIM~r------~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++|.+ +++++++++++.+++..|.+++.+.+||+|+
T Consensus 80 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 122 (144)
T 2nyc_A 80 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 122 (144)
T ss_dssp HHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 999876 6899999999999999999999999999997
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.74 E-value=6.9e-18 Score=147.01 Aligned_cols=106 Identities=19% Similarity=0.238 Sum_probs=92.1
Q ss_pred CcccccccccccCcc--eEEE--cCCCCchHHHHHHHHHcCCcEeeee--eCCCCcEEEEEEhhhhhcccc---------
Q 018752 71 LTEKTAKDAMTPISK--AFSL--DLDATLTLDTLNAIMTMGHSRVPVY--SGNPTNIIGLILVKNLLSVDY--------- 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~--VvtV--~~d~tv~~eal~~m~~~~~sriPVv--d~~~~~IVGIVt~kDLl~~~~--------- 135 (351)
+...+|+++|++..+ ++++ ++++++. +|++.|.+++++++||+ ++ .++++|+|+.+||+....
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~-~~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRE-SQRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTT-TCBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECC-CCeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 467899999998533 6778 9999999 99999999999999999 44 489999999999986532
Q ss_pred -------------------cCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 136 -------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 136 -------------------~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
....++.++|.+++++|++++++.+|+..|.+++.+.+||+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 147 (185)
T 2j9l_A 86 VSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN 147 (185)
T ss_dssp CTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEEC
Confidence 1246799998899999999999999999999999999999986
No 41
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.74 E-value=8.6e-18 Score=144.65 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=92.0
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc------------cCCc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY------------RDAV 139 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~------------~~~~ 139 (351)
..++|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 46789999986 678899999999 99999999999999999865 88999999999986532 1256
Q ss_pred chhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 140 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 140 ~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++.++|.++++++++++++.+|+..|.+++.+.+||+|+
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 117 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK 117 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC
Confidence 899999889999999999999999999999999999987
No 42
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.74 E-value=7.1e-18 Score=148.39 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=91.5
Q ss_pred cccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc-----cCCcchhhhhccC
Q 018752 74 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-----RDAVPLRKMIIRR 148 (351)
Q Consensus 74 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~-----~~~~~V~dIM~r~ 148 (351)
++|+++|++ +++++++++++. +++++|.+++++++||++++ ++++|+|+.+||+.... ....++.++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999985 788999999999 99999999999999999865 88999999999987543 1256899998889
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 149 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 149 v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++++++++.++++.|.+++.+.+||+|+
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 114 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDD 114 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 999999999999999999999999999998
No 43
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.72 E-value=2.2e-17 Score=140.54 Aligned_cols=102 Identities=14% Similarity=0.171 Sum_probs=89.5
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC-----Ccchhhhh
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 145 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~-----~~~V~dIM 145 (351)
+.+++|+++ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+||+...... ..++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 466788888 3677899999999 99999999999999999875 8999999999998754322 45789997
Q ss_pred c------cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 146 I------RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 146 ~------r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
. ++++++.+++++.+++..|.+++.+.+||+|+
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE 132 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC
Confidence 5 78999999999999999999999999999997
No 44
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.71 E-value=7.8e-18 Score=160.24 Aligned_cols=124 Identities=12% Similarity=0.254 Sum_probs=99.8
Q ss_pred ccCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhh
Q 018752 52 GKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 131 (351)
Q Consensus 52 ~~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl 131 (351)
+.+|.+.+.+.+.+.+. |.+.+|+++|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+|+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 44666777777778887 56889999999999999999999999 9999999999999999997657899999999998
Q ss_pred cccccC------------Ccc-------hhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 132 SVDYRD------------AVP-------LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 132 ~~~~~~------------~~~-------V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...... ... ++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 157 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP 157 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC
Confidence 643110 112 23567889999999999999999999999999999986
No 45
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.71 E-value=1.4e-17 Score=157.91 Aligned_cols=125 Identities=12% Similarity=0.209 Sum_probs=106.5
Q ss_pred cCCCCCHHHHHHHHHhhcC-cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhh
Q 018752 53 KGGDLTHDETTIIAGALEL-TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 131 (351)
Q Consensus 53 ~~G~L~~~E~~mI~~~l~l-~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl 131 (351)
+.|.++++|+++++++++| .+.+|.|+|+|+.++++++.++|+. +|++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4566788999999999998 9999999999999999999999999 9999999999999999997667999999999998
Q ss_pred ccccc----C----------Ccchhhh------hccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 132 SVDYR----D----------AVPLRKM------IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 132 ~~~~~----~----------~~~V~dI------M~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..... . ...+.++ |.++++++++++++.+++..|.+++.+.+||+|+
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 153 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQ 153 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEec
Confidence 64310 0 1223444 3678899999999999999999999999999998
No 46
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.68 E-value=1.7e-16 Score=148.52 Aligned_cols=130 Identities=15% Similarity=0.215 Sum_probs=106.9
Q ss_pred CCCHHHHHHHHHhcccccccCCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeee
Q 018752 34 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 113 (351)
Q Consensus 34 ~~s~eEL~~LI~~~~~es~~~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPV 113 (351)
.+|..||...+.. +.. ......+++.+.+.+|+++|++ +++++.+++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~-------~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCK-------DSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----ccc-------ccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4667777665531 110 0334555666678899999996 678999999999 9999999999999999
Q ss_pred eeCCCCcEEEEEEhhhhhcccccC--CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 114 YSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 114 vd~~~~~IVGIVt~kDLl~~~~~~--~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++ ++++|+++.+|++...... ..++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 195 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD 195 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9875 8899999999998765432 46899999899999999999999999999999999999997
No 47
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.68 E-value=4e-16 Score=141.25 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=91.2
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcE
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPR 151 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~ 151 (351)
...+++++|++ +++++++++|+. +++++|.+++++++||++++ ++++|+|+.+|++.... ..+++++|.+++++
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~ 84 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFF 84 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCC
T ss_pred cccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEE
Confidence 34578999985 778999999999 99999999999999999865 88999999999987764 45899999999999
Q ss_pred ecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 152 VSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 152 V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++++.++++.|.+++.+.+||+|+
T Consensus 85 v~~~~~l~~a~~~m~~~~~~~lpVvd~ 111 (213)
T 1vr9_A 85 VHEEDNITHALLLFLEHQEPYLPVVDE 111 (213)
T ss_dssp EETTSBHHHHHHHHHHCCCSEEEEECT
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEcC
Confidence 999999999999999999999999987
No 48
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.67 E-value=3.5e-16 Score=148.14 Aligned_cols=105 Identities=15% Similarity=0.229 Sum_probs=92.9
Q ss_pred cCcccccccc---cccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC-----Ccch
Q 018752 70 ELTEKTAKDA---MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPL 141 (351)
Q Consensus 70 ~l~d~tV~dI---MtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~-----~~~V 141 (351)
.+...+|+++ |++ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++++...+ ..++
T Consensus 183 ~~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 763 778999999999 99999999999999999875 8999999999998765432 4589
Q ss_pred hhhhcc------CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 142 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 142 ~dIM~r------~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 301 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 301 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC
Confidence 999887 7899999999999999999999999999997
No 49
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.66 E-value=4.2e-16 Score=158.06 Aligned_cols=131 Identities=10% Similarity=0.174 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHhcccccccCCCCC-----HHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCC
Q 018752 34 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 108 (351)
Q Consensus 34 ~~s~eEL~~LI~~~~~es~~~G~L~-----~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 108 (351)
.++++||..++.. ++..|.|. +++++++.+++.+ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 5788899988873 33334444 6788899888764 679986 778999999999 99999999999
Q ss_pred cEeeeee--CCCCcEEEEEEhhhhhcccccCCcchhhhhcc-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 109 SRVPVYS--GNPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 109 sriPVvd--~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r-~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++||++ ++ ++++|+|+.+||+... ....++.++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 122 ~~~pVvd~~~~-~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~ 192 (491)
T 1zfj_A 122 SGVPIVETLAN-RKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN 192 (491)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT
T ss_pred CEEEEEEeCCC-CEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999998 54 8999999999998653 235789999887 8999999999999999999999999999998
No 50
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.65 E-value=7.8e-16 Score=157.58 Aligned_cols=132 Identities=11% Similarity=0.182 Sum_probs=108.6
Q ss_pred CCCCHHHHHHHHHhcccccccCCCCC-----HHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcC
Q 018752 33 VLLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 107 (351)
Q Consensus 33 ~~~s~eEL~~LI~~~~~es~~~G~L~-----~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 107 (351)
..+|+++|...+... +.-|.|. +++.+++.+++. ++++|++ +++++++++|+. +++++|.+++
T Consensus 76 dtvTe~~lAia~a~~----GgiGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~ 143 (511)
T 3usb_A 76 DTVTEADMAIAMARQ----GGLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYR 143 (511)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHC
T ss_pred hhhcHHHHHHHHHhc----CCceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcC
Confidence 457888997766532 2223332 556667888865 5577875 778999999999 9999999999
Q ss_pred CcEeeeeeC--CCCcEEEEEEhhhhhcccccCCcchhhhhcc-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 108 HSRVPVYSG--NPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 108 ~sriPVvd~--~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r-~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++||+++ + ++++|+|+.+||+... ....+|.++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 144 ~s~~pVvd~g~~-~~lvGiVt~rDl~~~~-~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe 215 (511)
T 3usb_A 144 ISGVPVVNNLDE-RKLVGIITNRDMRFIQ-DYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN 215 (511)
T ss_dssp CSEEEEESCTTT-CBEEEEEEHHHHTTCC-CSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEEEEEecCCC-CEEEEEEEehHhhhhc-cCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC
Confidence 999999986 5 8999999999998632 236789999887 8999999999999999999999999999998
No 51
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.65 E-value=6.4e-16 Score=142.29 Aligned_cols=105 Identities=12% Similarity=0.235 Sum_probs=92.8
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC---Ccchhhhhc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMII 146 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~---~~~V~dIM~ 146 (351)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|+++..... ..++.++|.
T Consensus 80 ~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~ 155 (280)
T 3kh5_A 80 AAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPIVNDE-NQLISLITERDVIRALLDKIDENEVIDDYIT 155 (280)
T ss_dssp HHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCB
T ss_pred HHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEEEcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhC
Confidence 3346799999986 778999999999 99999999999999999875 8999999999998764332 347999998
Q ss_pred cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 147 RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 147 r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++++++++++.++++.|.+++.+.+||+++
T Consensus 156 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~ 187 (280)
T 3kh5_A 156 RDVIVATPGERLKDVARTMVRNGFRRLPVVSE 187 (280)
T ss_dssp CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 99999999999999999999999999999944
No 52
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.65 E-value=4.4e-16 Score=145.72 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=93.3
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----------CCcc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----------DAVP 140 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~----------~~~~ 140 (351)
....+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 456799999985 678999999999 99999999999999999865 899999999999876431 2468
Q ss_pred hhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 141 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 141 V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+.++|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 266 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK 266 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 99999999999999999999999999999999999997
No 53
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.64 E-value=6.8e-17 Score=169.15 Aligned_cols=105 Identities=17% Similarity=0.052 Sum_probs=91.8
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHH-HcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC----C--------
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM-TMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----A-------- 138 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~-~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~----~-------- 138 (351)
.+++|+|+|+|++++.++++++++. ++.+.|. +++++++||+|++ ++++|+|+.+|+++..... .
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999988999999999999 9999999 7999999999875 8999999999998754221 0
Q ss_pred ---------------------------------------cchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 139 ---------------------------------------VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 139 ---------------------------------------~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++.++|.+++++|++++++.++++.|.+++.+++||+|+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEEC
Confidence 0267889999999999999999999999999999999943
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.64 E-value=1.6e-15 Score=139.62 Aligned_cols=101 Identities=15% Similarity=0.245 Sum_probs=87.7
Q ss_pred cccc-ccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC----------------
Q 018752 75 TAKD-AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---------------- 137 (351)
Q Consensus 75 tV~d-IMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~---------------- 137 (351)
++.+ +|++ +++++++++|+. +|++.|.+++++++||++++.++++|+++.+||+......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 4455 4553 788999999999 9999999999999999986458999999999998654211
Q ss_pred --CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 --AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 --~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 123 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND 123 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC
Confidence 35789999889999999999999999999999999999987
No 55
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.63 E-value=5.5e-16 Score=142.22 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=89.8
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----------------
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------------- 136 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~---------------- 136 (351)
..+|+++|++ ++.++++++++. +|++.|.+++++++||+|++ ++++|+|+.+|++++...
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 678999999999 99999999999999999875 899999999999864311
Q ss_pred --------------------------------------------------------------------------------
Q 018752 137 -------------------------------------------------------------------------------- 136 (351)
Q Consensus 137 -------------------------------------------------------------------------------- 136 (351)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------CCcchhhhhc-cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 137 ---------------------DAVPLRKMII-RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 137 ---------------------~~~~V~dIM~-r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~ 225 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE 225 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC
Confidence 0235788988 89999999999999999999999999999998
No 56
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.63 E-value=9.2e-17 Score=163.93 Aligned_cols=132 Identities=15% Similarity=0.245 Sum_probs=103.3
Q ss_pred CCCCHHHHHHHHHhcccccccCCCC-----CHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcC
Q 018752 33 VLLRRAELKTFVNFHGNEAGKGGDL-----THDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 107 (351)
Q Consensus 33 ~~~s~eEL~~LI~~~~~es~~~G~L-----~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 107 (351)
..+|++++...+.. .+.-|.| .+++++++.++ ++++++|++ +++++++++++. +++++|.+++
T Consensus 52 dtVTe~~ma~a~a~----~GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQ----EGGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHH----HTCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHH----cCCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 46889999887763 2234445 66788999998 456889984 778999999999 9999999999
Q ss_pred CcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhc-c-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 108 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 108 ~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~-r-~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++||++++ ++++|+|+.+||+... ....+|.++|. + +++++++++++.++++.|.+++.+.+||+|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 190 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND 190 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999975 8999999999998543 23578999987 4 5999999999999999999999999999998
No 57
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.62 E-value=1.1e-15 Score=143.10 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=53.6
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCC-CCcEEEEEEhhhhhc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLS 132 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~-~~~IVGIVt~kDLl~ 132 (351)
....++|+|||++ +++++.+++++. ++.++|.+++++++||++++ .++++|+|+.+||+.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3567899999985 789999999999 99999999999999999864 267999999999975
No 58
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.62 E-value=7.9e-16 Score=157.64 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=89.7
Q ss_pred CcccccccccccCcceEEEcCC-CCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc----CCcchhhhh
Q 018752 71 LTEKTAKDAMTPISKAFSLDLD-ATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMI 145 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d-~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~----~~~~V~dIM 145 (351)
|.+.+|+++|++ +++++.++ +++. +++++|.+++++++||++++.++++|+|+.+||++.... ...+|.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999985 77899999 9999 999999999999999998324899999999999865432 256899999
Q ss_pred ccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 146 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 146 ~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.+++++|++++++.+++++|.+++ ++||+|+
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~ 488 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGK 488 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeC
Confidence 999999999999999999997665 5799988
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.61 E-value=2.1e-15 Score=139.40 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=90.3
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhh------cccc----------
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL------SVDY---------- 135 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl------~~~~---------- 135 (351)
.+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++ +...
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 46789999974 678999999999 99999999999999999865 7899999999998 4331
Q ss_pred ------------------cCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 136 ------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 136 ------------------~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
....+++++|.++++++.+++++.+|++.|.+++.+.+||+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 260 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRG 260 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECC
Confidence 0146789999999999999999999999999999999999997
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.59 E-value=1.7e-15 Score=140.05 Aligned_cols=99 Identities=22% Similarity=0.250 Sum_probs=71.5
Q ss_pred cccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcEec
Q 018752 74 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 153 (351)
Q Consensus 74 ~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~V~ 153 (351)
++|+++|++ +++++++++++. +|++.|.+++++++||++++ ++++|+++.+|++.... ..+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 478999985 778899999999 99999999999999999864 89999999999987654 4579999888899999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 154 EDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 154 ~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++.+++..|.+++.+.+||+|+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999999999999999999997
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.58 E-value=1.3e-14 Score=138.05 Aligned_cols=103 Identities=8% Similarity=0.179 Sum_probs=90.1
Q ss_pred ccccccc---ccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC-----Ccchhh
Q 018752 72 TEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRK 143 (351)
Q Consensus 72 ~d~tV~d---IMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~-----~~~V~d 143 (351)
...+|++ +|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....+ ..++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 3578899 4874 678899999999 99999999999999999875 7899999999998754321 467899
Q ss_pred hhcc------CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 144 MIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 144 IM~r------~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+|.+ +++++.+++++.++++.|.+++.+.+||+|+
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 296 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE 296 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 9874 8899999999999999999999999999997
No 62
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.57 E-value=4e-16 Score=159.38 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=21.1
Q ss_pred CCCCHHHHHHHHHhcccccccCCC----CC-HHHHHHHHHhhcCcccccccc-cccCcceEEEcCCCCchHHHHHHHHHc
Q 018752 33 VLLRRAELKTFVNFHGNEAGKGGD----LT-HDETTIIAGALELTEKTAKDA-MTPISKAFSLDLDATLTLDTLNAIMTM 106 (351)
Q Consensus 33 ~~~s~eEL~~LI~~~~~es~~~G~----L~-~~E~~mI~~~l~l~d~tV~dI-MtPr~~VvtV~~d~tv~~eal~~m~~~ 106 (351)
..+++++|...+... +..|. ++ +++++++.++.. .++ |++ +++++++++|+. +++++|.++
T Consensus 60 ~~vt~~~la~~la~~----gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~ 126 (503)
T 1me8_A 60 QSVSGEKMAIALARE----GGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRT 126 (503)
T ss_dssp TTTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHT------TTC----------------------------
T ss_pred hhhhHHHHHHHHHhC----CCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHc
Confidence 356788998777631 11122 22 566778877654 345 986 788999999999 999999999
Q ss_pred CCcEeeeeeCC--CCcEEEEEEhhhhhcccccCCcchhhhhccC--CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 107 GHSRVPVYSGN--PTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 107 ~~sriPVvd~~--~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~--v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++||++++ .++++|+|+.+||+........+|+++|.++ ++++++++++.+++++|.+++.+.+||+|+
T Consensus 127 ~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe 202 (503)
T 1me8_A 127 THNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD 202 (503)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred CceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 99999999864 2789999999999863222356899998776 999999999999999999999999999998
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.55 E-value=6e-16 Score=157.67 Aligned_cols=131 Identities=12% Similarity=0.221 Sum_probs=24.4
Q ss_pred CCCCHHHHHHHHHhcccccccCCCCC-----HHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcC
Q 018752 33 VLLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 107 (351)
Q Consensus 33 ~~~s~eEL~~LI~~~~~es~~~G~L~-----~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~ 107 (351)
..+|++++...+... +..|.|. +++++++.++. +++++|++ +++++++++|+. +++++|.+++
T Consensus 51 ~tVTe~~lA~ala~~----GGiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQE----GGIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHH----TSEEEECCSSCHHHHHHHHHHHH-----HCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHc----CCCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 457889999777632 2234444 66678888774 46889984 778999999999 9999999999
Q ss_pred CcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhc-c-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 108 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 108 ~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~-r-~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
++++||++ + ++++|+|+.+||.... ....+|.++|. + +++++++++++.+++++|.+++.+.+||+|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~~-~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 188 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVKP-NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE 188 (490)
T ss_dssp -------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhcc-ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 99999998 4 7999999999997433 23578999987 4 6999999999999999999999999999998
No 64
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.54 E-value=9.1e-16 Score=155.92 Aligned_cols=128 Identities=13% Similarity=0.232 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHhcccccccCCCCC-----HHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCC
Q 018752 34 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 108 (351)
Q Consensus 34 ~~s~eEL~~LI~~~~~es~~~G~L~-----~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~ 108 (351)
.++.+|+...+.. .+..|.|. +++++++.+++.+. ++|+. +++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~-----~~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAE-----RLIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchh-----hcccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 5677889887763 22233443 57789999998864 47874 889999999999 99999999999
Q ss_pred cEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 109 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 109 sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++||+++ ++++|+|+.+||+. ....++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde 189 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE 189 (486)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec
Confidence 99999986 78999999999986 2356899998888999999999999999999999999999998
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.53 E-value=5.3e-14 Score=133.72 Aligned_cols=102 Identities=14% Similarity=0.190 Sum_probs=87.9
Q ss_pred cccccc--cccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccC-----Ccchhhhh-
Q 018752 74 KTAKDA--MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI- 145 (351)
Q Consensus 74 ~tV~dI--MtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~-----~~~V~dIM- 145 (351)
.+++++ |+ ..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...... ..++.++|
T Consensus 190 ~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~ 266 (330)
T 2v8q_E 190 KSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQ 266 (330)
T ss_dssp SBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGG
T ss_pred CCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHHh
Confidence 455665 54 14678999999999 99999999999999999865 8899999999999876432 46788887
Q ss_pred -----ccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 146 -----IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 146 -----~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++++++++++++.+++..|.+++.+.+||+|+
T Consensus 267 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 304 (330)
T 2v8q_E 267 HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE 304 (330)
T ss_dssp GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC
Confidence 478999999999999999999999999999997
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.39 E-value=5.2e-14 Score=142.99 Aligned_cols=112 Identities=9% Similarity=0.190 Sum_probs=8.0
Q ss_pred CCH-HHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 57 LTH-DETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 57 L~~-~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
++. +.++.+.+++. ++++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+||+...
T Consensus 82 ~~~e~~~~~v~~v~~-----~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~- 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVKK-----TENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK- 151 (494)
T ss_dssp SCHHHHHHHHHHHHT-----C-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhhh-----HhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc-
Confidence 444 34556666654 5788985 788999999999 99999999999999999875 7899999999998642
Q ss_pred cCCcchhhhhcc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 136 RDAVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 136 ~~~~~V~dIM~r--~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
....++.++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 196 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK 196 (494)
T ss_dssp ---------------------------------------------
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 235689999887 8999999999999999999999999999998
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.28 E-value=6.3e-13 Score=135.43 Aligned_cols=110 Identities=12% Similarity=0.257 Sum_probs=10.3
Q ss_pred HHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCC--CCcEEEEEEhhhhhccccc
Q 018752 59 HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDYR 136 (351)
Q Consensus 59 ~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~--~~~IVGIVt~kDLl~~~~~ 136 (351)
++|.+++..+-.+.. .|. .+.+++.++.|+. +++++|.+++++.+||+++. .++++|||+.+|+... .
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 456788888866553 454 2668999999999 99999999999999999853 3789999999998754 3
Q ss_pred CCcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 137 DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 137 ~~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...+|+++|..+++++++..++++|.++|.++++..+||||+
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp ------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 357899999999999999999999999999999999999998
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.25 E-value=1.5e-13 Score=140.48 Aligned_cols=103 Identities=14% Similarity=0.235 Sum_probs=59.8
Q ss_pred ccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCC--CCcEEEEEEhhhhhcccc-cCCcchhhhhcc--CC
Q 018752 75 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDY-RDAVPLRKMIIR--RI 149 (351)
Q Consensus 75 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~--~~~IVGIVt~kDLl~~~~-~~~~~V~dIM~r--~v 149 (351)
++.++|++ +++++++++++. +++++|.+++++.+||++++ .++++|+|+.+|+..... ....++.++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899985 677899999999 99999999999999999863 378999999999986421 225689999887 89
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVVYKDLN 180 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apVVDe~G 180 (351)
+++++++++.++++.|.+++.+.+||+|+.|
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g 216 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCD 216 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSS
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCC
Confidence 9999999999999999999999999999843
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.97 E-value=9e-10 Score=83.27 Aligned_cols=65 Identities=14% Similarity=0.268 Sum_probs=55.2
Q ss_pred ceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc-----CCcchhhhhccCCcEe
Q 018752 85 KAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPRV 152 (351)
Q Consensus 85 ~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~-----~~~~V~dIM~r~v~~V 152 (351)
+++++++++|+. +|+++|.+++++++||+++ ++++|||+.+||++.... ...+++++|.+++++|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367999999999 9999999999999999985 689999999999754321 2468999999988765
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.74 E-value=1.7e-08 Score=74.18 Aligned_cols=64 Identities=13% Similarity=0.256 Sum_probs=54.4
Q ss_pred eEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc-----CCcchhhhhccCCcEe
Q 018752 86 AFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPRV 152 (351)
Q Consensus 86 VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~-----~~~~V~dIM~r~v~~V 152 (351)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++++... ...+++++|.+++++|
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 57899999999 9999999999999999986 789999999999876422 2467999988877653
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.71 E-value=9.7e-09 Score=92.48 Aligned_cols=103 Identities=12% Similarity=0.150 Sum_probs=53.7
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCc-E
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP-R 151 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~-~ 151 (351)
+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...... ..+.+.|.+-.+ +
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 4469999986 678999999999 99999999999999999875 8999999999999765432 123333322111 1
Q ss_pred ecCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 018752 152 VSEDMPLYDILNEFQKGHSHIAVVYKDLN 180 (351)
Q Consensus 152 V~~~~~L~daL~~m~~~~~~~apVVDe~G 180 (351)
.....++.++++.|.+++.+.++|++..|
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp -----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 13345699999999999999999987633
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.47 E-value=9.6e-08 Score=82.25 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=39.2
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+.+|+++|.+++++|.+++++.+|++.|.+++++.+||+|+
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 57 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ 57 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC
Confidence 46899999999999999999999999999999999999998
No 73
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.39 E-value=1.8e-07 Score=85.29 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=50.5
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
....+|+++|+| .+++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|++++.
T Consensus 182 ~~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 182 VQSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLISTH 242 (245)
T ss_dssp GGGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC------
T ss_pred hcCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhchh
Confidence 346789999997 6888999999999 99999999999999999876 8999999999998764
No 74
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.34 E-value=8.1e-07 Score=66.84 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=28.5
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 149 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 149 v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++|.+++++.+|+++|.+++++.+||+|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~ 31 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 578999999999999999999999999987
No 75
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.29 E-value=1e-06 Score=70.64 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=53.1
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
...+++++|.+ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++++..
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLFG 119 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHC
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHhh
Confidence 44589999986 667899999999 99999999999999999875 89999999999987653
No 76
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.27 E-value=7.3e-07 Score=75.18 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=54.5
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 136 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~ 136 (351)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ + |+++|+|+.+||+++...
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 457899999986 678899999999 999999999999999998 4 899999999999987543
No 77
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.25 E-value=9.9e-07 Score=74.86 Aligned_cols=78 Identities=17% Similarity=0.244 Sum_probs=62.4
Q ss_pred CCCCCHHHHHHHHHhh---cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCC---cEEEEEEh
Q 018752 54 GGDLTHDETTIIAGAL---ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT---NIIGLILV 127 (351)
Q Consensus 54 ~G~L~~~E~~mI~~~l---~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~---~IVGIVt~ 127 (351)
.|.++.. +++..++ ...+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ + +++|+|+.
T Consensus 60 ~Givt~~--dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~ 135 (159)
T 3fv6_A 60 VGVLSRK--DLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTK 135 (159)
T ss_dssp EEEEEHH--HHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEH
T ss_pred EEEEeHH--HHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEH
Confidence 4556533 3333332 356789999999766788999999999 99999999999999999875 6 89999999
Q ss_pred hhhhcccc
Q 018752 128 KNLLSVDY 135 (351)
Q Consensus 128 kDLl~~~~ 135 (351)
+||+++..
T Consensus 136 ~dil~~l~ 143 (159)
T 3fv6_A 136 TNMTKILV 143 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 78
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.24 E-value=2.5e-06 Score=71.21 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=38.4
Q ss_pred Ccchhhhhcc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r--~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.+ +++++++++++.+|++.|.+++.+.+||+|+
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 64 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK 64 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC
Confidence 5689999987 8999999999999999999999999999987
No 79
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.22 E-value=8.6e-07 Score=71.32 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=54.3
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
.+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++.+..
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAKM 121 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHC
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3467899999986 677999999999 9999999999999999986 78999999999987653
No 80
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.21 E-value=2.5e-06 Score=62.34 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=28.8
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 148 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 148 ~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
+++++++++++.++++.|.+++.+.+||+|+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~ 31 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 4578999999999999999999999999987
No 81
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.20 E-value=1e-06 Score=71.91 Aligned_cols=59 Identities=20% Similarity=0.352 Sum_probs=52.9
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++....
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAID 124 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHHH
Confidence 5789999985 677899999999 99999999999999999865 89999999999987653
No 82
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.19 E-value=3.1e-06 Score=69.45 Aligned_cols=41 Identities=12% Similarity=0.177 Sum_probs=38.2
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.++++++++++++.+|+..|.+++.+.+||+|+
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 46 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND 46 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 35789999899999999999999999999999999999986
No 83
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.19 E-value=3.5e-06 Score=70.55 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=37.6
Q ss_pred cchhhhhcc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 139 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 139 ~~V~dIM~r--~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~ 69 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD 69 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 479999888 8999999999999999999999999999997
No 84
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.19 E-value=2.1e-06 Score=71.01 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=52.9
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
....+++++|++ +.++++++++. ++++.|.+++...+||++++ |+++|+|+.+|+++...
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 356789999974 67899999999 99999999999999999875 89999999999998754
No 85
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.18 E-value=2.9e-06 Score=79.03 Aligned_cols=41 Identities=7% Similarity=0.235 Sum_probs=39.0
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
...++++|.+++++|.+++++.+|+++|.+++++.+||||+
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~ 52 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT 52 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec
Confidence 46799999999999999999999999999999999999987
No 86
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.18 E-value=2.1e-06 Score=70.31 Aligned_cols=60 Identities=25% Similarity=0.419 Sum_probs=53.8
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
..+.+|+++|++ ++.++++++++. ++++.|.+++++++||++ + |+++|+|+.+|++.+..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHH
Confidence 467899999986 678899999999 999999999999999998 4 89999999999987653
No 87
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.18 E-value=3.1e-06 Score=69.93 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=52.3
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.+.+++++|++ ++.+++++ ++. ++++.|.++++.++||++++ |+++|+|+.+||+++.
T Consensus 69 ~~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 69 LDGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNKN-GELVGVLSIRDLCFER 126 (141)
T ss_dssp TTSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHSCH
T ss_pred CCCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcCC-CcEEEEEEHHHHHHHH
Confidence 36789999985 77899999 999 99999999999999999865 8999999999999764
No 88
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.17 E-value=3.3e-06 Score=71.80 Aligned_cols=41 Identities=10% Similarity=0.082 Sum_probs=38.0
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.++++++++++++.+|+..|.+++.+.+||+|+
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 44 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA 44 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 35789999889999999999999999999999999999987
No 89
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.17 E-value=4.1e-06 Score=72.26 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=60.0
Q ss_pred CCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcc
Q 018752 54 GGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSV 133 (351)
Q Consensus 54 ~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~ 133 (351)
.|.++. ++++.....-...+|+++| + +++++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++.+
T Consensus 89 vGivt~--~dl~~~~~~~~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~ 161 (172)
T 3lhh_A 89 VGIISA--KQLLSESIAGERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDA 161 (172)
T ss_dssp EEEEEH--HHHHHHHHTTCCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred EEEEEH--HHHHHHHhhcCcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHH
Confidence 355654 3344444433477899999 3 678999999999 99999999999999999875 899999999999976
Q ss_pred cc
Q 018752 134 DY 135 (351)
Q Consensus 134 ~~ 135 (351)
..
T Consensus 162 l~ 163 (172)
T 3lhh_A 162 LT 163 (172)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 90
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.15 E-value=4.1e-06 Score=72.83 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=54.7
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
....+|+++|++ .++++++++++. ++++.|.+++++++||++++ ++++|+|+.+||+++..
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 457789999985 678999999999 99999999999999999875 88999999999998654
No 91
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.15 E-value=3e-06 Score=71.37 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=59.3
Q ss_pred CCCCCHHHHHHHHHhhcCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcc
Q 018752 54 GGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSV 133 (351)
Q Consensus 54 ~G~L~~~E~~mI~~~l~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~ 133 (351)
.|.++..+ ++.....-...+|+++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+..|++..
T Consensus 68 vGivt~~d--l~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~ 140 (153)
T 3oco_A 68 IGYAYNYD--IVRQARIDDKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEE 140 (153)
T ss_dssp EEEEEHHH--HHHHHHHHTTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHH
T ss_pred EEEEEHHH--HHhHHhcCCCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHH
Confidence 35565433 33332222378899999 3 678999999999 99999999999999999875 899999999999976
Q ss_pred cc
Q 018752 134 DY 135 (351)
Q Consensus 134 ~~ 135 (351)
..
T Consensus 141 l~ 142 (153)
T 3oco_A 141 LF 142 (153)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 92
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.15 E-value=3.5e-06 Score=70.83 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=37.2
Q ss_pred cchhhhhc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 139 VPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 139 ~~V~dIM~--r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.+++++|. ++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 56 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC
Confidence 46899988 78999999999999999999999999999987
No 93
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.15 E-value=2.3e-06 Score=70.10 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=51.4
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.+.+++++|++ ++++++++++. ++++.|.+++..++||++++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 56789999964 67899999999 99999999999999999875 8999999999999764
No 94
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.14 E-value=1.4e-06 Score=72.24 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=53.2
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
....+|+++|++ .++++++++++. ++++.|.+++++++||++++ |+++|+|+.+||++...
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAAL 142 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHHH
Confidence 346789999986 567899999999 99999999999999999865 89999999999998654
No 95
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.11 E-value=4.8e-06 Score=67.75 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=38.7
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG 44 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC
Confidence 46799999999999999999999999999999999999987
No 96
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.10 E-value=3e-06 Score=71.57 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=53.5
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
....+|+++|++ ++++++++++. ++++.|.++++.++||++++ ++++|+|+.+||++...
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLALW 152 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHHH
Confidence 467789999985 67899999999 99999999999999999865 89999999999987653
No 97
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.10 E-value=3.9e-06 Score=69.96 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.4
Q ss_pred Ccchhhhhc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~--r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|. ++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~ 56 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP 56 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC
Confidence 357999988 56999999999999999999999999999987
No 98
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.10 E-value=2.8e-06 Score=69.17 Aligned_cols=58 Identities=10% Similarity=0.132 Sum_probs=51.7
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.+.+++++|++ +.++++++++. ++++.|.+++..++||++++ |+++|+|+..|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 56789999964 46899999999 99999999999999999875 8999999999998764
No 99
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.10 E-value=5.2e-06 Score=71.07 Aligned_cols=39 Identities=5% Similarity=-0.039 Sum_probs=35.6
Q ss_pred chhhhhc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 140 PLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 140 ~V~dIM~--r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++++|. .++.+|.+++++.+|+..|.+++...+||+|+
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~ 56 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC
Confidence 5778876 47899999999999999999999999999987
No 100
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.09 E-value=4.3e-06 Score=71.33 Aligned_cols=62 Identities=15% Similarity=0.216 Sum_probs=55.1
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 136 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~ 136 (351)
...+.+|+++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+||+.+...
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTTC
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHH
Confidence 4567899999985 678899999999 9999999999999999987 799999999999987643
No 101
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.09 E-value=5.7e-06 Score=67.70 Aligned_cols=41 Identities=7% Similarity=0.157 Sum_probs=38.0
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 47 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD 47 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC
Confidence 35789999889999999999999999999999999999987
No 102
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.09 E-value=2.6e-06 Score=72.86 Aligned_cols=62 Identities=21% Similarity=0.374 Sum_probs=54.7
Q ss_pred cCcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 70 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 70 ~l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
.....+|+++|++ .++++++++++. ++++.|.++++.++||++++ |+++|+|+.+||++...
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAAL 155 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHHH
Confidence 3457789999986 567899999999 99999999999999999865 89999999999997653
No 103
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.08 E-value=4.8e-06 Score=68.10 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=51.7
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.+.+++++|+ ++.++++++++. ++++.|.+++..++||++++ |+++|+|+..|++++.
T Consensus 70 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMR---PIQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSE---ECCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhc---CCcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 4678999996 367899999999 99999999999999999875 8999999999998764
No 104
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.08 E-value=6e-06 Score=69.30 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=53.1
Q ss_pred cccccccccccC----cceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 72 TEKTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 72 ~d~tV~dIMtPr----~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.+.+++++|.++ .++.++++++++. ++++.|.++++.++||++++ |+++|+|+..|+++..
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 356899999743 3677999999999 99999999999999999875 8999999999998754
No 105
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.05 E-value=2.9e-06 Score=69.17 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=53.4
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|+++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLP 130 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 356789999986 677899999999 9999999999999999986 78999999999997653
No 106
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.05 E-value=4.3e-06 Score=68.73 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=51.5
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
...+++++|. ++.++++++++. ++++.|.+++...+||++++ |+++|+|+.+|++++..
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEIV 126 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHHh
Confidence 3467899994 457899999999 99999999999999999875 89999999999997653
No 107
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.05 E-value=6.8e-06 Score=69.39 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=37.9
Q ss_pred Ccchhhhhcc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r--~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.+ +++++++++++.+|++.|.+++.+.+||+|+
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 55 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP 55 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 3578999877 8999999999999999999999999999987
No 108
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.01 E-value=7.3e-06 Score=68.68 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=37.6
Q ss_pred Ccchhhhhcc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r--~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.+ +++++++++++.+|+..|.+++.+.+||+|+
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 52 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT 52 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC
Confidence 4578999876 8899999999999999999999999999987
No 109
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.00 E-value=1.2e-05 Score=65.96 Aligned_cols=40 Identities=10% Similarity=0.350 Sum_probs=36.2
Q ss_pred cchhh---hhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 139 VPLRK---MIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 139 ~~V~d---IM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.++++ +|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 50 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE 50 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC
Confidence 45666 77788999999999999999999999999999987
No 110
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.00 E-value=1.2e-05 Score=67.50 Aligned_cols=41 Identities=12% Similarity=0.226 Sum_probs=38.3
Q ss_pred CcchhhhhccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|.++++++++++++.+|++.|.+++.+.+||+|+
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~ 52 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES 52 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec
Confidence 46799999999999999999999999999999999999985
No 111
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.00 E-value=6.1e-06 Score=69.94 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=50.3
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 132 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~ 132 (351)
.+.+++++|++ ++++++++++. ++++.|.+++...+||++++ |+++|+|+.+|++.
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dile 156 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDIIE 156 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHCC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhcC
Confidence 46789999974 67899999999 99999999999999999875 89999999999863
No 112
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.97 E-value=5.8e-06 Score=74.12 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=54.5
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
..+.+|+++|++ +++++++++++. ++++.|.++++..+||+|++ |+++|+|+..|++....
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVR 173 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 356789999975 678999999999 99999999999999999875 89999999999997654
No 113
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.97 E-value=3.3e-06 Score=86.07 Aligned_cols=100 Identities=15% Similarity=0.225 Sum_probs=20.0
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCC--
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 149 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v-- 149 (351)
.+.+|+++|++..+++++++++++. +++++|.++++..+||+|++ ++++|+|+.+||++...... ...+.+.+-.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4567999999755589999999999 99999999999999999976 89999999999998754321 1222211111
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEE
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVV 175 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apV 175 (351)
..+.. ....+.+..|.+.+.+++.|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 23444 66777788898889987544
No 114
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.93 E-value=1.9e-05 Score=68.68 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=37.4
Q ss_pred Ccchhhhhc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 138 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 138 ~~~V~dIM~--r~v~~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
..+++++|. ++++++++++++.+++..|.+++...+||+|+
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~ 77 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG 77 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC
Confidence 568999986 46889999999999999999999999999987
No 115
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.91 E-value=1.7e-05 Score=68.12 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=35.9
Q ss_pred CcchhhhhccC----CcEe--cCCCCHHHHHHHHHhCCCcEEEEEe
Q 018752 138 AVPLRKMIIRR----IPRV--SEDMPLYDILNEFQKGHSHIAVVYK 177 (351)
Q Consensus 138 ~~~V~dIM~r~----v~~V--~~~~~L~daL~~m~~~~~~~apVVD 177 (351)
..+++++|.+. ++++ ++++++.+|++.|.+++.+.+||++
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~ 55 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVV 55 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEES
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEE
Confidence 45799998776 7888 9999999999999999999999993
No 116
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.85 E-value=3.4e-05 Score=78.83 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=79.0
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 150 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~ 150 (351)
-.+.+|+++|++ .++++++++.++. +++++|.+++...+||+|++ ++++|+|+.+|+++..... ..+.+.+.+-.+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999996 5778999999999 99999999999999999976 8999999999999865432 233344333333
Q ss_pred --EecCCCCHHHHHHHHHhCCCcEEEEEec
Q 018752 151 --RVSEDMPLYDILNEFQKGHSHIAVVYKD 178 (351)
Q Consensus 151 --~V~~~~~L~daL~~m~~~~~~~apVVDe 178 (351)
.+.......+.+..+.+.+...+.|...
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a 277 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTA 277 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred eeeeeeccchHHHHHHHHhhccceEEeccc
Confidence 2444445567778888889987766544
No 117
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.76 E-value=2e-05 Score=73.48 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=54.0
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
..+.+|+++|++ +++++++++++. ++++.|.++++..+||++++ |+++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 357789999975 678999999999 99999999999999999875 89999999999997654
No 118
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.71 E-value=4.1e-05 Score=78.11 Aligned_cols=40 Identities=8% Similarity=0.130 Sum_probs=37.8
Q ss_pred CcchhhhhccCCcEecCC-CCHHHHHHHHHhCCCcEEEEEe
Q 018752 138 AVPLRKMIIRRIPRVSED-MPLYDILNEFQKGHSHIAVVYK 177 (351)
Q Consensus 138 ~~~V~dIM~r~v~~V~~~-~~L~daL~~m~~~~~~~apVVD 177 (351)
..+|+++|.++++++.++ +++.++++.|.+++...+||+|
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 367999999999999999 9999999999999999999999
No 119
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.66 E-value=2.8e-05 Score=73.06 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=54.3
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
..+.+|+++|++ +++++++++++. ++++.|.++++.++||++++ |+++|+|+..|++....
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVID 258 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 357789999985 678999999999 99999999999999999875 89999999999997653
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.50 E-value=7.1e-05 Score=78.15 Aligned_cols=57 Identities=5% Similarity=-0.028 Sum_probs=49.4
Q ss_pred ccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccccc
Q 018752 75 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 136 (351)
Q Consensus 75 tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~ 136 (351)
+|+++|++ +++++++++++. ++++.|.+++..++||+ ++ |+++|+|+.+|+++...+
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVv-e~-G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVT-ER-GKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEE-ET-TEEEEEEEGGGTEECCCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEE-EC-CEEEEEEehhhHHHHHhh
Confidence 48999986 667999999999 99999999999999999 43 789999999999987643
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.48 E-value=7e-05 Score=76.07 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=15.6
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccC--C
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--I 149 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~--v 149 (351)
.+.+|+++|+|+.+++++++++++. +++++|.+++...+||+|++ ++++|+|+.+|+++...... ...+.--+- .
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~-a~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPL-ASKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcc-hhhhccCcceee
Confidence 3567999999755688999999999 99999999999999999975 89999999999998643211 111110010 1
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEe
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAVVYK 177 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~apVVD 177 (351)
..+.......+.+..+.+.+...+ ++|
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I-~id 248 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVV-VVD 248 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEE-EEE
T ss_pred eeeccccchHHHHHHHhhcccceE-Eec
Confidence 123333344555666666777644 444
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.44 E-value=0.00011 Score=74.24 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=54.6
Q ss_pred CcccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccc
Q 018752 71 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 135 (351)
Q Consensus 71 l~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~ 135 (351)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++....
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHHH
Confidence 357789999975 678999999999 99999999999999999875 89999999999997653
No 123
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.30 E-value=0.00012 Score=73.92 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=22.0
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCc--
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP-- 150 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~-- 150 (351)
+.+|+++|+++.+++++++++++. +++++|.++++..+||+|++ ++++|+|+.+|+++..... ...++. ...+.
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~-~~~l~vg 229 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDE-KGRLLVG 229 (494)
T ss_dssp ---------------------------------------------------------CHHHHTCT-TCCBCT-TSCBCCE
T ss_pred CCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccc-hhhhccc
Confidence 467999999755788999999999 99999999999999999875 8999999999999765321 111121 11111
Q ss_pred -EecCCCCHHHHHHHHHhCCCcEEEE
Q 018752 151 -RVSEDMPLYDILNEFQKGHSHIAVV 175 (351)
Q Consensus 151 -~V~~~~~L~daL~~m~~~~~~~apV 175 (351)
-+.......+.+..+.+.+...+.+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 1333355667777788888776554
No 124
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.28 E-value=9.5e-05 Score=75.24 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=43.9
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
.+.+|+++|+|+.++++++++.++. +++++|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 4678999999765688999999999 99999999999999999976 8999999999999764
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.14 E-value=0.00022 Score=72.50 Aligned_cols=98 Identities=10% Similarity=0.111 Sum_probs=57.0
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCCc-
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 150 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v~- 150 (351)
.+.+++++|++..+++++++++++. +++++|.+++...+||+|++ ++++|+|+.+|+++...... ...+ +.....
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~~-~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRDYPL-ASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCCCTT-CCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhhCcc-hhcc-cCCceee
Confidence 3567899998655778999999999 99999999999999999875 89999999999997653211 1111 111111
Q ss_pred --EecCCCCHHHHHHHHHhCCCcEE
Q 018752 151 --RVSEDMPLYDILNEFQKGHSHIA 173 (351)
Q Consensus 151 --~V~~~~~L~daL~~m~~~~~~~a 173 (351)
.+.......+.+..+.+.+...+
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v 271 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVI 271 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEE
Confidence 13333345556666666666644
No 126
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.12 E-value=0.00019 Score=73.48 Aligned_cols=58 Identities=19% Similarity=0.299 Sum_probs=0.0
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhccc
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 134 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~ 134 (351)
+.+|+++||+ ++++++.+.+++ +|.++|.++++..+||+|++ ++++|+|+.+|+++..
T Consensus 199 ~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 199 ETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp --------------------------------------------------------------
T ss_pred ceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhh
Confidence 5689999996 799999999999 99999999999999999986 8999999999998753
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.98 E-value=0.00048 Score=69.60 Aligned_cols=97 Identities=19% Similarity=0.260 Sum_probs=17.6
Q ss_pred ccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCC--c
Q 018752 73 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI--P 150 (351)
Q Consensus 73 d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v--~ 150 (351)
+.+++++|++ +++++++++++. ++++.|.+++...+||++++ ++++|+|+.+||++...... ...+.+.+-. .
T Consensus 149 ~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~~ 223 (486)
T 2cu0_A 149 GKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVAA 223 (486)
T ss_dssp --------------------------------------------------------------CCTT-CCBCTTSCBCCEE
T ss_pred CCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeecc
Confidence 4578999985 678999999999 99999999999999999875 88999999999998754211 1111111111 1
Q ss_pred EecCCCCHHHHHHHHHhCCCcEEEEEe
Q 018752 151 RVSEDMPLYDILNEFQKGHSHIAVVYK 177 (351)
Q Consensus 151 ~V~~~~~L~daL~~m~~~~~~~apVVD 177 (351)
.+.. .. .+.+..|.+.+...+ |+|
T Consensus 224 ~~~~-~~-~~~a~~l~~~gvd~l-vvd 247 (486)
T 2cu0_A 224 AVSP-FD-IKRAIELDKAGVDVI-VVD 247 (486)
T ss_dssp EECT-TC-HHHHHHHHHTTCSEE-EEE
T ss_pred eech-hh-HHHHHHHHHhcCCce-EEE
Confidence 1333 33 566778888888875 555
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.86 E-value=0.0032 Score=63.34 Aligned_cols=99 Identities=12% Similarity=0.153 Sum_probs=68.1
Q ss_pred cccccccccccCcceEEEcCCCCchHHHHHHHHHcCCcEeeeeeCCCCcEEEEEEhhhhhcccccCCcchhhhhccCC--
Q 018752 72 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 149 (351)
Q Consensus 72 ~d~tV~dIMtPr~~VvtV~~d~tv~~eal~~m~~~~~sriPVvd~~~~~IVGIVt~kDLl~~~~~~~~~V~dIM~r~v-- 149 (351)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||++++ ++++|+|+..|+++...... ...+...+-.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 46789999984 2567899999999 99999999999999999875 89999999999997654210 1111100101
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEE
Q 018752 150 PRVSEDMPLYDILNEFQKGHSHIAV 174 (351)
Q Consensus 150 ~~V~~~~~L~daL~~m~~~~~~~ap 174 (351)
..+.......+.+..+.+.+...+.
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~iv 250 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIV 250 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEE
Confidence 1233333345556666667777654
Done!