Query 018759
Match_columns 351
No_of_seqs 165 out of 215
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 05:37:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018759.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018759hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 51.3 40 0.0029 24.5 12.9 37 33-69 2-38 (107)
2 d1fxkc_ a.2.5.1 (C:) Prefoldin 36.8 75 0.0055 23.5 11.7 10 109-118 95-104 (133)
3 d2efla1 a.238.1.4 (A:1-288) Fo 24.8 1.6E+02 0.012 23.5 16.3 23 30-52 72-94 (288)
4 d1s35a2 a.7.1.1 (A:1169-1273) 20.8 1.2E+02 0.0089 20.7 9.5 38 31-68 32-69 (105)
5 d1u5pa2 a.7.1.1 (A:1772-1872) 20.3 1.2E+02 0.0087 20.4 7.7 39 30-68 29-67 (101)
6 d1fxka_ a.2.5.1 (A:) Prefoldin 17.6 1.6E+02 0.012 20.9 10.1 25 101-125 64-88 (107)
7 d2fzta1 a.46.3.1 (A:1-78) Hypo 17.5 1.5E+02 0.011 20.4 9.1 29 100-128 48-76 (78)
8 d1bh9a_ a.22.1.3 (A:) TAF(II)1 17.4 17 0.0012 23.2 0.6 14 319-332 2-15 (45)
9 d1t01a1 a.24.9.1 (A:1-125) Vin 16.4 54 0.0039 25.0 3.6 82 56-137 14-97 (125)
10 d2efka1 a.238.1.4 (A:10-288) C 15.7 2.5E+02 0.018 22.1 15.7 21 30-50 63-83 (279)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=51.32 E-value=40 Score=24.54 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=27.3
Q ss_pred hhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018759 33 DYDQELARLWSLSSALSQADDKKQTLQQKLQSLIQVK 69 (351)
Q Consensus 33 ~~~~~L~rL~~L~~~iqda~~~~~~L~~qI~~lLe~~ 69 (351)
.++..++++..|..-++.+...+..|+.++++.=.+.
T Consensus 2 ~lqe~~~~~q~lq~el~~~~~q~~~le~q~~E~~~vl 38 (107)
T d1fxka_ 2 NVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKAL 38 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677788888888888888888888888777654443
No 2
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=36.80 E-value=75 Score=23.49 Aligned_cols=10 Identities=20% Similarity=0.355 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 018759 109 NQEERLSMEV 118 (351)
Q Consensus 109 k~reeL~~~i 118 (351)
+|.++|...+
T Consensus 95 ~ri~~l~~~~ 104 (133)
T d1fxkc_ 95 SQKNELESTL 104 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 3
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.82 E-value=1.6e+02 Score=23.47 Aligned_cols=23 Identities=9% Similarity=0.020 Sum_probs=13.6
Q ss_pred ehhhhHHHHHHHhcHHHHHHHHH
Q 018759 30 EWEDYDQELARLWSLSSALSQAD 52 (351)
Q Consensus 30 ~~~~~~~~L~rL~~L~~~iqda~ 52 (351)
.|..+.+....++.....+.+.+
T Consensus 72 ~~~~~~~~~~~~a~~h~~~a~~l 94 (288)
T d2efla1 72 AFISNLNEMNDYAGQHEVISENM 94 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777666555554444443
No 4
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.79 E-value=1.2e+02 Score=20.68 Aligned_cols=38 Identities=11% Similarity=0.129 Sum_probs=18.6
Q ss_pred hhhhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018759 31 WEDYDQELARLWSLSSALSQADDKKQTLQQKLQSLIQV 68 (351)
Q Consensus 31 ~~~~~~~L~rL~~L~~~iqda~~~~~~L~~qI~~lLe~ 68 (351)
...++.-+.+.-.|.+-|..-..+...|...-+.++..
T Consensus 32 l~~v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~ 69 (105)
T d1s35a2 32 LEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAE 69 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 34444445555445555555555555555544444443
No 5
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=20.34 E-value=1.2e+02 Score=20.40 Aligned_cols=39 Identities=10% Similarity=0.031 Sum_probs=24.6
Q ss_pred ehhhhHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018759 30 EWEDYDQELARLWSLSSALSQADDKKQTLQQKLQSLIQV 68 (351)
Q Consensus 30 ~~~~~~~~L~rL~~L~~~iqda~~~~~~L~~qI~~lLe~ 68 (351)
+.+.++..+.+.-.+..-|..-....+.|....+.++..
T Consensus 29 d~~~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~ 67 (101)
T d1u5pa2 29 DLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDD 67 (101)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 455666666666666666666666666666666666654
No 6
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=17.65 E-value=1.6e+02 Score=20.86 Aligned_cols=25 Identities=12% Similarity=0.165 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 018759 101 KVEKEDAKNQEERLSMEVRSLLVAG 125 (351)
Q Consensus 101 ~~~~~~~~k~reeL~~~ir~l~~~~ 125 (351)
..+...+.++.+.|...+.++....
T Consensus 64 ~e~~~~l~~~~e~l~~~i~~l~~q~ 88 (107)
T d1fxka_ 64 DELTEELQEKLETLQLREKTIERQE 88 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555554444
No 7
>d2fzta1 a.46.3.1 (A:1-78) Hypothetical protein TM0693 {Thermotoga maritima [TaxId: 2336]}
Probab=17.50 E-value=1.5e+02 Score=20.43 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 018759 100 SKVEKEDAKNQEERLSMEVRSLLVAGTAL 128 (351)
Q Consensus 100 ~~~~~~~~~k~reeL~~~ir~l~~~~~~l 128 (351)
-++..+-++++...|.+.+.-+....+++
T Consensus 48 D~kR~e~i~k~~~~L~q~~~~ir~~~~~l 76 (78)
T d2fzta1 48 DRKRLEIIEKRKTALFQEINVIREARSSL 76 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444566667777777766665555444
No 8
>d1bh9a_ a.22.1.3 (A:) TAF(II)18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.35 E-value=17 Score=23.22 Aligned_cols=14 Identities=7% Similarity=-0.026 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhcCC
Q 018759 319 LNKGTFNLRNRINR 332 (351)
Q Consensus 319 LNknI~qL~~~~Gl 332 (351)
.+|||.++++.+|=
T Consensus 2 F~~ei~~mMy~~GD 15 (45)
T d1bh9a_ 2 FSKELRCMMYGFGD 15 (45)
T ss_dssp CHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHcCC
Confidence 48999999999993
No 9
>d1t01a1 a.24.9.1 (A:1-125) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=16.36 E-value=54 Score=24.98 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHHhhHHHHHHH
Q 018759 56 QTLQQKLQSLIQVKAESLKRSNELEEMRERLEARRLLMEKMSMRSKVEKEDAKN--QEERLSMEVRSLLVAGTALSVARK 133 (351)
Q Consensus 56 ~~L~~qI~~lLe~~~~~l~~~~~l~~~~~rl~~~~~~~~~~~~~~~~~~~~~~k--~reeL~~~ir~l~~~~~~l~~a~~ 133 (351)
+=|..||..++--..+.-.....++.+..-.+.....++.+..--+...++... =++++......+..++..+..+..
T Consensus 14 ePl~~QVstLV~~~e~~~~~~~~~~~l~~~~~aV~~Av~~fv~vG~~~a~~s~d~~lk~eM~~A~~~vr~ag~~l~~aa~ 93 (125)
T d1t01a1 14 EPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVRAAQ 93 (125)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccCccccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777775443332223333444444555556666665555554443322 456677777777778777776666
Q ss_pred HHHH
Q 018759 134 RLQE 137 (351)
Q Consensus 134 ~L~e 137 (351)
.+.+
T Consensus 94 ~l~~ 97 (125)
T d1t01a1 94 MLQA 97 (125)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5554
No 10
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.73 E-value=2.5e+02 Score=22.08 Aligned_cols=21 Identities=10% Similarity=0.101 Sum_probs=13.2
Q ss_pred ehhhhHHHHHHHhcHHHHHHH
Q 018759 30 EWEDYDQELARLWSLSSALSQ 50 (351)
Q Consensus 30 ~~~~~~~~L~rL~~L~~~iqd 50 (351)
.|..+.+.+...+.....+.+
T Consensus 63 ~~~~~~~~~~~~a~~~~~~~~ 83 (279)
T d2efka1 63 SFVQILQEVNDFAGQRELVAE 83 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 588887777666555444433
Done!