Your job contains 1 sequence.
>018761
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIV
TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV
LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI
FLFALVDASCFQAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGW
HMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL
TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018761
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076954 - symbol:AT3G02690 species:3702 "Arabi... 593 1.1e-57 1
TIGR_CMR|SPO_3584 - symbol:SPO_3584 "membrane protein, dr... 137 3.4e-11 2
UNIPROTKB|Q3Z7M8 - symbol:DET1056 "Membrane protein, puta... 147 5.1e-08 1
TIGR_CMR|DET_1056 - symbol:DET_1056 "membrane protein, pu... 147 5.1e-08 1
UNIPROTKB|P0AA70 - symbol:yedA "putative membrane transpo... 119 5.4e-08 2
TIGR_CMR|BA_0829 - symbol:BA_0829 "transporter, EamA fami... 142 2.4e-07 1
UNIPROTKB|Q3AAZ7 - symbol:CHY_1867 "Putative membrane pro... 139 5.3e-07 1
TIGR_CMR|CHY_1867 - symbol:CHY_1867 "putative membrane pr... 139 5.3e-07 1
UNIPROTKB|Q8E8X4 - symbol:SO_4527 "10 TMS drug/metabolite... 99 5.4e-07 2
TIGR_CMR|SO_4527 - symbol:SO_4527 "integral membrane doma... 99 5.4e-07 2
TIGR_CMR|BA_2736 - symbol:BA_2736 "transporter, EamA fami... 131 4.5e-06 1
TIGR_CMR|BA_3061 - symbol:BA_3061 "transporter, EamA fami... 113 9.1e-06 2
UNIPROTKB|P31437 - symbol:yicL "inhibitor of heme biosynt... 93 2.9e-05 2
TIGR_CMR|BA_1759 - symbol:BA_1759 "transporter, EamA fami... 112 7.9e-05 2
UNIPROTKB|Q4KB90 - symbol:PFL_3388 "Putative membrane pro... 111 0.00096 1
>TAIR|locus:2076954 [details] [associations]
symbol:AT3G02690 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;ISS] InterPro:IPR000620 Pfam:PF00892 GO:GO:0009507
EMBL:AC021640 EMBL:CP002686 GO:GO:0016020 eggNOG:COG0697
EMBL:AF428434 EMBL:AY045633 EMBL:AY133570 EMBL:AY087405
IPI:IPI00547917 RefSeq:NP_566180.1 UniGene:At.18824
UniGene:At.53162 UniGene:At.75116 IntAct:Q93V85 STRING:Q93V85
PRIDE:Q93V85 EnsemblPlants:AT3G02690.1 GeneID:821274
KEGG:ath:AT3G02690 GeneFarm:3094 TAIR:At3g02690
HOGENOM:HOG000275238 InParanoid:Q93V85 OMA:NGQHVAL PhylomeDB:Q93V85
ProtClustDB:CLSN2688009 Genevestigator:Q93V85 Uniprot:Q93V85
Length = 417
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 109/150 (72%), Positives = 126/150 (84%)
Query: 197 DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLN 256
D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+N
Sbjct: 263 DGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVIN 322
Query: 257 HDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASI 316
HDPV+ S+++L+++D++ALLYTSIFGSA+SYGVYFY PMFASI
Sbjct: 323 HDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFASI 382
Query: 317 FGFLYLGETFSPLQLVGAAVTVVAIYLVNF 346
FG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 383 FGYLYLNETFSSLQLVGAAVTLVAIYLVNF 412
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 91/198 (45%), Positives = 118/198 (59%)
Query: 61 TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV 120
+N +T ++ SSS+VDCV G+DVEC+ + D EE + G+ G LEW V
Sbjct: 73 SNNSTEETESSSSSSSVDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTV 127
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+SPFFFWGTAMVAMKEVLP G FFVAAFRLIPAGLLL+ FA +GR LP G NAW SI
Sbjct: 128 LISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSI 187
Query: 181 FLFALVDASCFQAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGW 240
LFALVDA+CFQ + G G +++ +Q + V + + V A G
Sbjct: 188 ALFALVDATCFQGFLAQGLQRTSAGLGS--VIIDSQPLTVAVLASFLFGESIGIVRAGGL 245
Query: 241 HMVIGGLPLMVISVLNHD 258
+ + GL L+ + + D
Sbjct: 246 LLGVAGLLLLEVPSVTSD 263
>TIGR_CMR|SPO_3584 [details] [associations]
symbol:SPO_3584 "membrane protein, drug/metabolite
transporter (DMT) family" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168779.1
ProteinModelPortal:Q5LMH9 GeneID:3193360 KEGG:sil:SPO3584
PATRIC:23380645 HOGENOM:HOG000275237 KO:K15269 OMA:NLTFTAW
Uniprot:Q5LMH9
Length = 306
Score = 137 (53.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 215 AQSMAVGTVMVR-WVSKYSDPVMA-TGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 272
A SMAVG V+ R W + P++ T W + GGL L+ ++ L G L+ ++
Sbjct: 156 ALSMAVGVVLTRKW--RPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPG-----LSLTN 208
Query: 273 ILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLV 332
+ AL + + G A++Y ++F P+ A I G+L LGE SP+Q +
Sbjct: 209 LAALAWLGLIGGALTYILWFRGLARIEPAAVSLLGILSPLTAVILGWLALGEALSPVQGL 268
Query: 333 GAAVTVVAIYL 343
GA + + A+++
Sbjct: 269 GAVIVLGAVWI 279
Score = 79 (32.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFL 182
WG++ + LP F VA R +PAGLLL+ RKLP W+ L
Sbjct: 21 WGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLV----RKLPP--RGWIGRLL 69
>UNIPROTKB|Q3Z7M8 [details] [associations]
symbol:DET1056 "Membrane protein, putative" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 209 WWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 267
+W+LLAA ++ V R + KYS +T + + G L+++ P + + E
Sbjct: 150 FWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YAIWAGTLLLMVGA----PGLLKEISE 203
Query: 268 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 327
+S LA++Y IF +AISY +Y Y P+FA FL+LGE +
Sbjct: 204 APASSTLAVVYLGIFPTAISYLLYSYALSKARISQVISFLYLNPVFAIGIAFLWLGEIPA 263
Query: 328 PLQLVGAAVTVVAIYLVNFRG 348
P+ L+G + + + LVN G
Sbjct: 264 PISLLGGLLALAGVILVNRYG 284
>TIGR_CMR|DET_1056 [details] [associations]
symbol:DET_1056 "membrane protein, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 209 WWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 267
+W+LLAA ++ V R + KYS +T + + G L+++ P + + E
Sbjct: 150 FWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YAIWAGTLLLMVGA----PGLLKEISE 203
Query: 268 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 327
+S LA++Y IF +AISY +Y Y P+FA FL+LGE +
Sbjct: 204 APASSTLAVVYLGIFPTAISYLLYSYALSKARISQVISFLYLNPVFAIGIAFLWLGEIPA 263
Query: 328 PLQLVGAAVTVVAIYLVNFRG 348
P+ L+G + + + LVN G
Sbjct: 264 PISLLGGLLALAGVILVNRYG 284
>UNIPROTKB|P0AA70 [details] [associations]
symbol:yedA "putative membrane transport protein"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IMP;RCA] [GO:0022857 "transmembrane transporter
activity" evidence=IMP;RCA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000620
InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0697 GO:GO:0022857 EMBL:X13330
PIR:JS0266 RefSeq:NP_416468.1 RefSeq:YP_490212.1
ProteinModelPortal:P0AA70 EnsemblBacteria:EBESCT00000001675
EnsemblBacteria:EBESCT00000014501 GeneID:12932061 GeneID:946461
KEGG:ecj:Y75_p1928 KEGG:eco:b1959 PATRIC:32119247 EchoBASE:EB1131
EcoGene:EG11141 HOGENOM:HOG000258419 OMA:AYMALVQ
ProtClustDB:PRK11272 BioCyc:EcoCyc:EG11141-MONOMER
BioCyc:ECOL316407:JW1942-MONOMER Genevestigator:P0AA70
TIGRFAMs:TIGR00950 Uniprot:P0AA70
Length = 306
Score = 119 (46.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 44/146 (30%), Positives = 67/146 (45%)
Query: 206 SGEWW----MLLAAQSMAVGTVMVRWVSKYSDPV--MATGWHMVIGGLPLMVISVLNHDP 259
SG W +L+ + S A G+V + S+ + PV MA M+ G+ LM+ S+
Sbjct: 146 SGNPWGAILILIGSISWAFGSV---YGSRITLPVGMMAGAIEMLAAGVVLMIASM----- 197
Query: 260 VYGESVKELTS-SDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFG 318
+ GE + L S S LA+ Y ++FGS I+ Y Y P+ A + G
Sbjct: 198 IAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLG 257
Query: 319 FLYLGETFSPLQLVGAAVTVVAIYLV 344
GET S ++ + V V A+ LV
Sbjct: 258 TGLGGETLSKIEWLALGVIVFAVVLV 283
Score = 69 (29.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 110 MELGMLLE-WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR 168
M LL + L + + WG+ ++ + +A R + AG+LL+ F +G
Sbjct: 1 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH 60
Query: 169 KLP 171
KLP
Sbjct: 61 KLP 63
>TIGR_CMR|BA_0829 [details] [associations]
symbol:BA_0829 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:IFLGEEL
RefSeq:NP_843346.1 RefSeq:YP_017467.1 RefSeq:YP_027065.1
IntAct:Q81UN5 DNASU:1088044 EnsemblBacteria:EBBACT00000010024
EnsemblBacteria:EBBACT00000015709 EnsemblBacteria:EBBACT00000022247
GeneID:1088044 GeneID:2814609 GeneID:2853121 KEGG:ban:BA_0829
KEGG:bar:GBAA_0829 KEGG:bat:BAS0789 HOGENOM:HOG000084080
ProtClustDB:CLSK915986 BioCyc:BANT260799:GJAJ-869-MONOMER
BioCyc:BANT261594:GJ7F-899-MONOMER Uniprot:Q81UN5
Length = 303
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/140 (24%), Positives = 66/140 (47%)
Query: 204 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGE 263
+ SG+ WM+ A + +V +W +K + P+MAT + + G + L+ ++ +
Sbjct: 150 FNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIFGVILLLPFNIGSF------ 203
Query: 264 SVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLG 323
+V + +S I +LLYT + + + + P+F +I FL+LG
Sbjct: 204 TVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFNPIFTAILAFLFLG 263
Query: 324 ETFSPLQLVGAAVTVVAIYL 343
E + +Q+VG + + YL
Sbjct: 264 EELTWIQIVGTMIVMTGCYL 283
>UNIPROTKB|Q3AAZ7 [details] [associations]
symbol:CHY_1867 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_360687.1 STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867
PATRIC:21276829 HOGENOM:HOG000245425 OMA:HIPPLAY
ProtClustDB:CLSK941309 BioCyc:CHYD246194:GJCN-1866-MONOMER
Uniprot:Q3AAZ7
Length = 303
Score = 139 (54.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 211 MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS 270
++LAA + + TV+ + S+ +D V+ + ++G + L+ I +L H P++ L
Sbjct: 155 LILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS-----LQP 209
Query: 271 SDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQ 330
IL + Y + F + ++Y YF P+ AS F + LGE +
Sbjct: 210 KAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKITFEF 269
Query: 331 LVGAAVTVVAIYLVNFRGSV 350
+ G V ++ IY+V + G V
Sbjct: 270 IAGTMVILLGIYIVQWAGQV 289
>TIGR_CMR|CHY_1867 [details] [associations]
symbol:CHY_1867 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_360687.1
STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867 PATRIC:21276829
HOGENOM:HOG000245425 OMA:HIPPLAY ProtClustDB:CLSK941309
BioCyc:CHYD246194:GJCN-1866-MONOMER Uniprot:Q3AAZ7
Length = 303
Score = 139 (54.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 211 MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS 270
++LAA + + TV+ + S+ +D V+ + ++G + L+ I +L H P++ L
Sbjct: 155 LILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS-----LQP 209
Query: 271 SDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQ 330
IL + Y + F + ++Y YF P+ AS F + LGE +
Sbjct: 210 KAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKITFEF 269
Query: 331 LVGAAVTVVAIYLVNFRGSV 350
+ G V ++ IY+V + G V
Sbjct: 270 IAGTMVILLGIYIVQWAGQV 289
>UNIPROTKB|Q8E8X4 [details] [associations]
symbol:SO_4527 "10 TMS drug/metabolite efflux pump (DME)
family" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 226 RWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIF 282
RW+ ++ D ++ T W +++GGL L+ ++ L P ++ S D++ +L++ +
Sbjct: 154 RWMQRWDVGDFLVLTAWQLLLGGLMLIPLAWLMAGP------PQIPSMDVVPSLIWLATA 207
Query: 283 GSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 342
+A++Y + + P+ A G L +GET Q G V ++++
Sbjct: 208 NTAVAYWAWLWSMRNLGPEIMGMVALVNPVVAVSLGVLIVGETLDMRQWAGILVILLSLL 267
Query: 343 LV 344
L+
Sbjct: 268 LM 269
Score = 81 (33.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCF 191
L A + F
Sbjct: 60 SLLAFCNIGAF 70
>TIGR_CMR|SO_4527 [details] [associations]
symbol:SO_4527 "integral membrane domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 226 RWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIF 282
RW+ ++ D ++ T W +++GGL L+ ++ L P ++ S D++ +L++ +
Sbjct: 154 RWMQRWDVGDFLVLTAWQLLLGGLMLIPLAWLMAGP------PQIPSMDVVPSLIWLATA 207
Query: 283 GSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 342
+A++Y + + P+ A G L +GET Q G V ++++
Sbjct: 208 NTAVAYWAWLWSMRNLGPEIMGMVALVNPVVAVSLGVLIVGETLDMRQWAGILVILLSLL 267
Query: 343 LV 344
L+
Sbjct: 268 LM 269
Score = 81 (33.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCF 191
L A + F
Sbjct: 60 SLLAFCNIGAF 70
>TIGR_CMR|BA_2736 [details] [associations]
symbol:BA_2736 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000258419 RefSeq:NP_845086.1 RefSeq:YP_019376.1
RefSeq:YP_028809.1 DNASU:1087282 EnsemblBacteria:EBBACT00000011317
EnsemblBacteria:EBBACT00000018593 EnsemblBacteria:EBBACT00000023481
GeneID:1087282 GeneID:2815576 GeneID:2848087 KEGG:ban:BA_2736
KEGG:bar:GBAA_2736 KEGG:bat:BAS2549 OMA:PHIFSKR
ProtClustDB:CLSK916775 BioCyc:BANT260799:GJAJ-2614-MONOMER
BioCyc:BANT261594:GJ7F-2707-MONOMER Uniprot:Q81PR5
Length = 305
Score = 131 (51.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 36/168 (21%), Positives = 71/168 (42%)
Query: 182 LFALVDASCFQAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV---MAT 238
+ AL+ P + S +W + +++ +G++ + + V +
Sbjct: 124 IIALIGVVFVSLPGMHQEISFIWSIACFVLIIGELFYGIGSIRSKEILSDLQSVSLFLIN 183
Query: 239 GWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIFGSAISYGVYFYXXXX 297
G M GG+ L+++S + P +V L S + +LY GS +G+Y++
Sbjct: 184 GIQMFYGGVLLLIVSFIVEQP----NVTVLASWSVQWPILYLIFIGSIGGHGLYYWLLSK 239
Query: 298 XXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 345
P+ A I G++ LGE +P+ +GA +V ++L N
Sbjct: 240 TNPVFPSTWLYVSPLIAIIVGYIILGEPLNPIMGIGACFILVGVFLAN 287
>TIGR_CMR|BA_3061 [details] [associations]
symbol:BA_3061 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:NTLTWPV
HOGENOM:HOG000093012 ProtClustDB:CLSK916911 RefSeq:NP_845391.1
RefSeq:YP_019702.1 RefSeq:YP_029105.1 DNASU:1088199
EnsemblBacteria:EBBACT00000010502 EnsemblBacteria:EBBACT00000015515
EnsemblBacteria:EBBACT00000023157 GeneID:1088199 GeneID:2817371
GeneID:2850052 KEGG:ban:BA_3061 KEGG:bar:GBAA_3061 KEGG:bat:BAS2848
BioCyc:BANT260799:GJAJ-2910-MONOMER
BioCyc:BANT261594:GJ7F-3013-MONOMER Uniprot:Q81NW1
Length = 303
Score = 113 (44.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 228 VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS 287
++KYS + T W +IG +PL++ + N + + V L+ +L Y+ IF +
Sbjct: 176 ITKYS-AMRVTSWSTLIGIVPLVIYCLFNVNSLTWP-VDTLSWG---SLAYSIIFATIFG 230
Query: 288 YGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 347
+++ P+FA IF + +GE + +QLVG + V +Y+V +
Sbjct: 231 LAMWYVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVK-K 289
Query: 348 GSV 350
G +
Sbjct: 290 GGI 292
Score = 54 (24.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAG--LLLITFASSQGRKLPSG 173
+EW +LVS WG K + + + R + A LLLITF + ++
Sbjct: 6 MEW-LLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLRIER- 63
Query: 174 FNAWVSIFLFALVDASCFQ 192
W+ + +V + +Q
Sbjct: 64 -KDWLRLVAVGIVGTTMYQ 81
>UNIPROTKB|P31437 [details] [associations]
symbol:yicL "inhibitor of heme biosynthesis" species:83333
"Escherichia coli K-12" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000620 InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006810 EMBL:L10328 eggNOG:COG0697
TIGRFAMs:TIGR00950 PIR:E65167 RefSeq:NP_418116.1 RefSeq:YP_491775.1
ProteinModelPortal:P31437 EnsemblBacteria:EBESCT00000004055
EnsemblBacteria:EBESCT00000015184 GeneID:12930633 GeneID:948176
KEGG:ecj:Y75_p3515 KEGG:eco:b3660 PATRIC:32122809 EchoBASE:EB1639
EcoGene:EG11688 HOGENOM:HOG000083322 OMA:NRPARDE
ProtClustDB:CLSK880756 BioCyc:EcoCyc:EG11688-MONOMER
BioCyc:ECOL316407:JW3634-MONOMER Genevestigator:P31437
Uniprot:P31437
Length = 307
Score = 93 (37.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/141 (22%), Positives = 62/141 (43%)
Query: 209 WWMLLAAQSMAVGTVMVRW-VSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVK 266
+W + +A + A T +++Y PV+ GW M+IGGL L+ P Y
Sbjct: 160 FWGIASAFAAAFYTTYPSTLIARYGTLPVV--GWSMLIGGLILL--------PFYARQGT 209
Query: 267 E--LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGE 324
+ S ILA Y + G+++++ +Y P+ +++ L LG
Sbjct: 210 NFVVNGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGI 269
Query: 325 TFSPLQLVGAAVTVVAIYLVN 345
TF+ +G + + ++ L++
Sbjct: 270 TFTLPDWLGTLLILSSVILIS 290
Score = 72 (30.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW 177
VL++ WG++ V + ++ ++ + F+ RLI AGL+L+T + G K+ S N
Sbjct: 11 VLIAAVL-WGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNH 69
Query: 178 ---VSIFLFALVDASCFQ 192
+S+ +F++V A Q
Sbjct: 70 KDAISLLIFSVVGALTVQ 87
>TIGR_CMR|BA_1759 [details] [associations]
symbol:BA_1759 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000083322 RefSeq:NP_844189.1 RefSeq:YP_027897.1
RefSeq:YP_052624.1 IntAct:Q81SA6 DNASU:1086541
EnsemblBacteria:EBBACT00000009207 EnsemblBacteria:EBBACT00000015226
EnsemblBacteria:EBBACT00000021776 GeneID:1086541 GeneID:2820885
GeneID:2852628 KEGG:ban:BA_1759 KEGG:bar:GBAA_1759 KEGG:bat:BAS1631
OMA:VSTEWLV ProtClustDB:CLSK916350
BioCyc:BANT260799:GJAJ-1702-MONOMER
BioCyc:BANT261594:GJ7F-1773-MONOMER Uniprot:Q81SA6
Length = 322
Score = 112 (44.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 31/138 (22%), Positives = 66/138 (47%)
Query: 210 WMLLAAQSMAVGTVMVRWV-SKYSDPVMATGWHMVIGGLPLMVISVLN-HDPVYGESVKE 267
W +L+ S+A ++ + + ++S V+ GW M+IGG+ + ++ ++ + + +VK
Sbjct: 165 WGILSGLSLAFYSLYSKGLLERWSSSVIV-GWGMIIGGIGVTIVHFISTKEFILLSTVKY 223
Query: 268 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 327
+ S + + + IFG+ I++ +Y P+ A I L L F
Sbjct: 224 VKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQ 283
Query: 328 PLQLVGAAVTVVAIYLVN 345
QL+GA +V + +++
Sbjct: 284 SFQLLGAFCVIVMVLILS 301
Score = 47 (21.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 128 WGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW 177
WG + A +++ T ++ RL+ +G++L+ AS G F W
Sbjct: 20 WGLSGTAAQQLFQYDNISTEWLVTIRLLISGIILLIIASF-GTSKKEIFGIW 70
>UNIPROTKB|Q4KB90 [details] [associations]
symbol:PFL_3388 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000076
GenomeReviews:CP000076_GR HOGENOM:HOG000184106 RefSeq:YP_260493.1
STRING:Q4KB90 GeneID:3476281 KEGG:pfl:PFL_3388 PATRIC:19876105
eggNOG:NOG311597 OMA:IFFYNLC ProtClustDB:CLSK300052
BioCyc:PFLU220664:GIX8-3403-MONOMER Uniprot:Q4KB90
Length = 318
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 49/221 (22%), Positives = 93/221 (42%)
Query: 126 FFWGTAM-VAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFA 184
FF+ + +++V + VA L PA + L ++A + R L +++ L
Sbjct: 92 FFYNLCFFLGLEQVKASRASLIVA---LNPAVIALASWALFKER-LGRRKLLGIALCLCG 147
Query: 185 LVDASCFQAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVI 244
C + P+ + + W G+ +L V ++ R ++ + +++
Sbjct: 148 AALVICSRDPSALAAQAGSW-QGDLLILGCVLGWGVYSLFSRGLNHSLGSLQTVTCSILL 206
Query: 245 GGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXX 304
G L L +++ + ++V L + L+LLY + GSA++Y Y+
Sbjct: 207 GTLMLCAATLIRGEFDL-QAVARLNLAQGLSLLYLGVLGSALAYIWYYDGLRRIGATRCG 265
Query: 305 XXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 345
P+ A I G L LGE SP+ +G A+ + IY N
Sbjct: 266 VFIALNPLTAVILGALVLGEQLSPVMGLGGALILGGIYQCN 306
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 301 0.00096 115 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 621 (66 KB)
Total size of DFA: 218 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.51u 0.14s 25.65t Elapsed: 00:00:01
Total cpu time: 25.51u 0.14s 25.65t Elapsed: 00:00:01
Start: Fri May 10 02:28:40 2013 End: Fri May 10 02:28:41 2013