Query 018762
Match_columns 350
No_of_seqs 277 out of 1033
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 05:40:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018762.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018762hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyx_A ORF K3, K3RING; zinc-bi 99.7 5.8E-18 2E-22 127.2 4.5 56 102-160 4-59 (60)
2 2d8s_A Cellular modulator of i 99.7 3.3E-17 1.1E-21 129.3 5.3 58 102-160 13-70 (80)
3 2kiz_A E3 ubiquitin-protein li 98.9 1.6E-09 5.5E-14 80.5 5.1 52 102-160 12-63 (69)
4 2ep4_A Ring finger protein 24; 98.8 5.2E-09 1.8E-13 78.7 5.6 52 103-161 14-65 (74)
5 1x4j_A Ring finger protein 38; 98.8 3.1E-09 1.1E-13 80.5 3.4 51 102-159 21-71 (75)
6 2ect_A Ring finger protein 126 98.7 4.6E-09 1.6E-13 79.8 3.4 52 102-160 13-64 (78)
7 1iym_A EL5; ring-H2 finger, ub 98.7 3.5E-09 1.2E-13 75.2 2.2 50 103-159 4-54 (55)
8 2l0b_A E3 ubiquitin-protein li 98.7 7.9E-09 2.7E-13 81.7 3.7 51 102-159 38-88 (91)
9 1v87_A Deltex protein 2; ring- 98.6 3.2E-08 1.1E-12 80.1 4.3 52 104-160 25-94 (114)
10 2ecm_A Ring finger and CHY zin 98.6 3E-08 1E-12 70.2 3.1 50 103-159 4-54 (55)
11 2ecl_A Ring-box protein 2; RNF 98.5 2.8E-08 9.6E-13 77.1 2.9 50 104-160 15-76 (81)
12 2ct2_A Tripartite motif protei 98.5 1.1E-07 3.7E-12 73.1 5.6 54 102-160 13-68 (88)
13 2ea6_A Ring finger protein 4; 98.5 5.9E-08 2E-12 71.2 3.9 51 102-159 13-67 (69)
14 2yur_A Retinoblastoma-binding 98.4 1.4E-07 4.9E-12 71.4 4.5 50 102-159 13-63 (74)
15 2csy_A Zinc finger protein 183 98.4 2.9E-07 9.8E-12 70.5 5.7 48 102-159 13-60 (81)
16 3ng2_A RNF4, snurf, ring finge 98.4 9.1E-08 3.1E-12 70.8 2.6 52 102-160 8-63 (71)
17 2ysl_A Tripartite motif-contai 98.4 2.5E-07 8.5E-12 69.0 4.3 51 102-160 18-69 (73)
18 2d8t_A Dactylidin, ring finger 98.4 1.6E-07 5.6E-12 70.3 3.2 48 103-160 14-61 (71)
19 2ecy_A TNF receptor-associated 98.3 3.8E-07 1.3E-11 67.2 4.6 50 102-160 13-62 (66)
20 1chc_A Equine herpes virus-1 r 98.3 3.2E-07 1.1E-11 67.6 3.6 50 102-160 3-52 (68)
21 3dpl_R Ring-box protein 1; ubi 98.3 2.9E-07 9.9E-12 75.9 3.6 50 104-160 37-101 (106)
22 2ecn_A Ring finger protein 141 98.3 2.4E-07 8.2E-12 68.8 2.0 47 103-160 14-60 (70)
23 3ztg_A E3 ubiquitin-protein li 98.3 7.7E-07 2.6E-11 69.4 4.9 50 102-159 11-61 (92)
24 2xeu_A Ring finger protein 4; 98.3 2.8E-07 9.6E-12 66.6 2.2 51 103-160 2-56 (64)
25 2ecw_A Tripartite motif-contai 98.3 1.2E-06 4.2E-11 66.2 5.7 50 103-160 18-71 (85)
26 2ysj_A Tripartite motif-contai 98.3 1.3E-06 4.3E-11 63.7 5.5 45 102-154 18-63 (63)
27 2ecv_A Tripartite motif-contai 98.3 1.3E-06 4.4E-11 66.1 5.7 51 102-160 17-71 (85)
28 2ecj_A Tripartite motif-contai 98.2 9.6E-07 3.3E-11 62.8 4.6 45 102-154 13-58 (58)
29 2djb_A Polycomb group ring fin 98.2 1E-06 3.5E-11 66.1 4.7 49 102-160 13-62 (72)
30 1t1h_A Gspef-atpub14, armadill 98.2 1.1E-06 3.6E-11 66.6 3.7 50 102-160 6-55 (78)
31 2ct0_A Non-SMC element 1 homol 98.2 9.5E-07 3.3E-11 68.9 3.3 53 101-160 12-64 (74)
32 4a0k_B E3 ubiquitin-protein li 98.1 4.1E-07 1.4E-11 76.6 0.3 50 104-160 48-112 (117)
33 2egp_A Tripartite motif-contai 98.1 9.4E-07 3.2E-11 66.6 1.3 51 102-160 10-65 (79)
34 4ayc_A E3 ubiquitin-protein li 97.9 1.5E-06 5.2E-11 73.2 0.6 48 103-160 52-99 (138)
35 3lrq_A E3 ubiquitin-protein li 97.9 2.7E-06 9.1E-11 68.1 1.7 49 103-160 21-70 (100)
36 4ap4_A E3 ubiquitin ligase RNF 97.9 5.1E-06 1.7E-10 67.5 2.7 53 103-162 6-62 (133)
37 1g25_A CDK-activating kinase a 97.9 6.1E-06 2.1E-10 60.5 2.7 52 103-160 2-55 (65)
38 3k1l_B Fancl; UBC, ring, RWD, 97.8 8.6E-06 2.9E-10 80.4 3.8 55 102-159 306-372 (381)
39 3fl2_A E3 ubiquitin-protein li 97.8 5.1E-06 1.7E-10 68.4 1.7 49 103-160 51-99 (124)
40 2y43_A E3 ubiquitin-protein li 97.8 5.3E-06 1.8E-10 65.7 1.2 48 103-160 21-69 (99)
41 1e4u_A Transcriptional repress 97.8 2.2E-05 7.5E-10 61.1 4.4 56 102-162 9-64 (78)
42 1jm7_A BRCA1, breast cancer ty 97.7 7E-06 2.4E-10 65.7 1.5 50 103-160 20-70 (112)
43 4ap4_A E3 ubiquitin ligase RNF 97.7 1.5E-05 5.2E-10 64.7 3.1 52 102-160 70-125 (133)
44 2ckl_A Polycomb group ring fin 97.7 1.1E-05 3.8E-10 64.9 2.1 48 103-160 14-62 (108)
45 2ckl_B Ubiquitin ligase protei 97.7 1.5E-05 5.2E-10 68.6 3.0 49 103-160 53-102 (165)
46 3hct_A TNF receptor-associated 97.6 3.7E-05 1.3E-09 63.0 3.7 50 102-160 16-65 (118)
47 3l11_A E3 ubiquitin-protein li 97.6 7E-06 2.4E-10 66.6 -0.8 50 102-160 13-62 (115)
48 1z6u_A NP95-like ring finger p 97.6 1.9E-05 6.4E-10 68.1 1.6 49 103-160 77-125 (150)
49 1rmd_A RAG1; V(D)J recombinati 97.5 3.2E-05 1.1E-09 62.8 1.8 49 103-160 22-70 (116)
50 2kr4_A Ubiquitin conjugation f 97.5 0.00013 4.3E-09 57.1 5.0 49 102-160 12-60 (85)
51 2y1n_A E3 ubiquitin-protein li 97.3 9.4E-05 3.2E-09 73.6 3.7 49 104-161 332-380 (389)
52 2vje_B MDM4 protein; proto-onc 97.3 9.5E-05 3.2E-09 54.8 2.7 50 102-161 5-57 (63)
53 2ea5_A Cell growth regulator w 97.3 0.00027 9.2E-09 53.3 5.2 47 101-161 12-59 (68)
54 2kre_A Ubiquitin conjugation f 97.3 0.00019 6.6E-09 58.0 4.2 49 102-160 27-75 (100)
55 3knv_A TNF receptor-associated 97.2 8.4E-05 2.9E-09 63.5 1.1 50 101-159 28-77 (141)
56 2vje_A E3 ubiquitin-protein li 97.1 0.00022 7.5E-09 52.9 2.8 49 103-161 7-58 (64)
57 4ic3_A E3 ubiquitin-protein li 97.1 5.9E-05 2E-09 57.3 -0.4 45 103-161 23-68 (74)
58 1bor_A Transcription factor PM 97.1 0.00011 3.7E-09 52.9 0.6 45 103-160 5-49 (56)
59 1jm7_B BARD1, BRCA1-associated 97.0 7.4E-05 2.5E-09 61.0 -0.6 45 103-159 21-66 (117)
60 2c2l_A CHIP, carboxy terminus 97.0 0.00045 1.6E-08 62.5 4.3 49 103-160 207-255 (281)
61 1wgm_A Ubiquitin conjugation f 96.9 0.00093 3.2E-08 53.8 5.0 50 102-160 20-69 (98)
62 3hcs_A TNF receptor-associated 96.7 0.00097 3.3E-08 57.4 3.4 50 102-160 16-65 (170)
63 2yu4_A E3 SUMO-protein ligase 96.5 0.0016 5.5E-08 51.5 3.7 48 102-157 5-59 (94)
64 2ecg_A Baculoviral IAP repeat- 96.4 0.00065 2.2E-08 51.4 0.6 44 103-160 24-68 (75)
65 2f42_A STIP1 homology and U-bo 96.4 0.0019 6.4E-08 57.9 3.7 49 103-160 105-153 (179)
66 3nw0_A Non-structural maintena 96.1 0.0026 9E-08 59.0 3.2 50 104-161 180-230 (238)
67 3htk_C E3 SUMO-protein ligase 96.1 0.0038 1.3E-07 59.4 4.0 51 102-160 179-232 (267)
68 1wim_A KIAA0161 protein; ring 96.0 0.0034 1.2E-07 49.2 2.7 50 103-158 4-62 (94)
69 3t6p_A Baculoviral IAP repeat- 95.4 0.0023 7.9E-08 62.4 -0.3 45 103-161 294-339 (345)
70 2yho_A E3 ubiquitin-protein li 95.2 0.0036 1.2E-07 48.3 0.3 45 103-161 17-62 (79)
71 2lri_C Autoimmune regulator; Z 94.4 0.014 4.8E-07 44.3 1.6 55 98-161 6-63 (66)
72 2bay_A PRE-mRNA splicing facto 94.4 0.02 6.9E-07 42.3 2.4 47 105-161 4-51 (61)
73 1weo_A Cellulose synthase, cat 87.3 0.6 2E-05 37.9 4.2 52 103-160 15-70 (93)
74 2l43_A N-teminal domain from h 86.9 0.19 6.5E-06 39.8 1.1 56 101-159 22-77 (88)
75 1weu_A Inhibitor of growth fam 86.0 0.49 1.7E-05 38.1 3.1 50 101-158 33-86 (91)
76 1wen_A Inhibitor of growth fam 84.3 0.37 1.3E-05 36.8 1.6 51 101-159 13-67 (71)
77 1wev_A Riken cDNA 1110020M19; 81.0 0.076 2.6E-06 42.1 -3.6 56 102-160 14-75 (88)
78 3vk6_A E3 ubiquitin-protein li 77.8 1.3 4.4E-05 36.6 2.7 48 106-161 3-50 (101)
79 2ku3_A Bromodomain-containing 76.4 0.42 1.5E-05 36.5 -0.5 51 103-157 15-66 (71)
80 2k16_A Transcription initiatio 76.2 0.34 1.2E-05 36.6 -1.1 52 103-159 17-70 (75)
81 2e6r_A Jumonji/ARID domain-con 75.1 0.34 1.1E-05 38.7 -1.5 51 102-158 14-67 (92)
82 2l5u_A Chromodomain-helicase-D 72.0 1 3.5E-05 33.1 0.6 47 103-157 10-58 (61)
83 1f62_A Transcription factor WS 71.7 0.82 2.8E-05 32.0 0.1 45 106-156 2-49 (51)
84 1wem_A Death associated transc 71.2 2 6.8E-05 32.5 2.2 51 102-158 14-71 (76)
85 3u5n_A E3 ubiquitin-protein li 69.2 0.44 1.5E-05 42.6 -2.3 49 103-159 6-56 (207)
86 1xwh_A Autoimmune regulator; P 68.5 0.46 1.6E-05 35.4 -2.0 47 102-157 6-55 (66)
87 3o36_A Transcription intermedi 68.3 0.66 2.2E-05 40.6 -1.3 49 103-159 3-53 (184)
88 1mm2_A MI2-beta; PHD, zinc fin 68.2 0.72 2.5E-05 33.9 -0.9 46 103-157 8-56 (61)
89 2ysm_A Myeloid/lymphoid or mix 66.7 1.1 3.7E-05 36.2 -0.2 45 103-153 6-53 (111)
90 2vnf_A ING 4, P29ING4, inhibit 64.7 0.65 2.2E-05 34.1 -1.7 47 102-156 8-58 (60)
91 2ri7_A Nucleosome-remodeling f 64.6 1.4 4.7E-05 37.9 -0.0 52 102-158 6-60 (174)
92 2jmi_A Protein YNG1, ING1 homo 64.3 0.64 2.2E-05 37.3 -2.0 48 102-157 24-76 (90)
93 2lbm_A Transcriptional regulat 63.0 3.7 0.00013 35.4 2.4 45 103-156 62-116 (142)
94 3ql9_A Transcriptional regulat 61.5 5.2 0.00018 34.0 3.0 47 103-157 56-111 (129)
95 1wep_A PHF8; structural genomi 61.5 5.1 0.00017 30.5 2.7 53 102-159 10-65 (79)
96 2yt5_A Metal-response element- 61.0 0.84 2.9E-05 33.5 -1.7 52 102-158 4-62 (66)
97 2lv9_A Histone-lysine N-methyl 58.4 2.3 7.7E-05 34.1 0.2 49 103-157 27-76 (98)
98 4gne_A Histone-lysine N-methyl 55.7 3.3 0.00011 34.0 0.8 46 102-155 13-60 (107)
99 2yql_A PHD finger protein 21A; 55.4 0.95 3.2E-05 32.5 -2.2 46 103-156 8-55 (56)
100 2kwj_A Zinc finger protein DPF 52.4 3.5 0.00012 33.6 0.4 49 105-157 2-67 (114)
101 3v43_A Histone acetyltransfera 50.5 7 0.00024 31.6 2.0 33 104-141 5-43 (112)
102 1wew_A DNA-binding family prot 48.3 18 0.00061 27.5 3.9 50 101-157 13-72 (78)
103 2ko5_A Ring finger protein Z; 47.4 5.9 0.0002 32.5 1.0 46 104-160 28-73 (99)
104 2g6q_A Inhibitor of growth pro 46.5 1.3 4.4E-05 32.9 -2.8 48 101-156 8-59 (62)
105 3kv5_D JMJC domain-containing 46.3 3.3 0.00011 42.1 -0.8 53 102-159 35-90 (488)
106 1fp0_A KAP-1 corepressor; PHD 45.6 5.6 0.00019 31.7 0.6 47 103-157 24-72 (88)
107 2puy_A PHD finger protein 21A; 42.7 1.9 6.4E-05 31.3 -2.4 49 103-159 4-54 (60)
108 2vpb_A Hpygo1, pygopus homolog 42.7 9.9 0.00034 28.3 1.6 48 103-155 7-64 (65)
109 3c6w_A P28ING5, inhibitor of g 42.1 1.6 5.5E-05 32.0 -2.8 47 102-156 7-57 (59)
110 1x4i_A Inhibitor of growth pro 41.6 4.1 0.00014 30.8 -0.7 52 102-159 4-57 (70)
111 2xb1_A Pygopus homolog 2, B-ce 37.3 10 0.00034 30.7 0.9 51 105-159 4-63 (105)
112 3v43_A Histone acetyltransfera 35.5 5.5 0.00019 32.2 -0.9 47 105-156 62-111 (112)
113 2ro1_A Transcription intermedi 34.5 5.6 0.00019 35.2 -1.1 47 104-158 2-50 (189)
114 3ask_A E3 ubiquitin-protein li 33.8 8.3 0.00028 35.7 -0.1 48 105-157 175-225 (226)
115 2e6s_A E3 ubiquitin-protein li 30.2 5.5 0.00019 30.7 -1.7 45 106-156 28-76 (77)
116 3asl_A E3 ubiquitin-protein li 29.7 4.6 0.00016 30.4 -2.2 47 106-157 20-69 (70)
117 1we9_A PHD finger family prote 25.5 24 0.00083 25.3 1.2 52 102-157 4-58 (64)
118 3shb_A E3 ubiquitin-protein li 23.9 5.4 0.00018 30.8 -2.8 25 132-156 49-76 (77)
119 2rsd_A E3 SUMO-protein ligase 23.5 24 0.00082 26.0 0.8 49 101-156 7-64 (68)
No 1
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=99.70 E-value=5.8e-18 Score=127.16 Aligned_cols=56 Identities=38% Similarity=0.805 Sum_probs=49.5
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..||||+++. ++.+++||+|+|++++||++||++|+..+++.+||+|+++|+.
T Consensus 4 ~~~~~CrIC~~~~---~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 4 EDVPVCWICNEEL---GNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CSCCEETTTTEEC---SCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCEeEEeecCC---CCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 3567999999763 3457899999999999999999999999999999999999973
No 2
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=3.3e-17 Score=129.35 Aligned_cols=58 Identities=33% Similarity=0.771 Sum_probs=51.3
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|+||++++. .++.+++||+|+|++|+||++||++|+..+++.+||+|+++|..
T Consensus 13 ~~~~~C~IC~~~~~-~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 13 SSQDICRICHCEGD-DESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 70 (80)
T ss_dssp TTSCCCSSSCCCCC-SSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCC
T ss_pred CCCCCCeEcCcccc-CCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeec
Confidence 35679999998874 45567899999999999999999999999888999999999985
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.88 E-value=1.6e-09 Score=80.51 Aligned_cols=52 Identities=31% Similarity=0.784 Sum_probs=43.1
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+..+.....+||+ |.||..|+.+|+..+ .+||+|+..+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCM-----HLFHQVCVDQWLITN--KKCPICRVDIEA 63 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCSBSCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCC-----CHHHHHHHHHHHHcC--CCCcCcCccccC
Confidence 3567899999887555566778998 999999999999874 579999999875
No 4
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=5.2e-09 Score=78.71 Aligned_cols=52 Identities=25% Similarity=0.662 Sum_probs=42.6
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
++..|.||++++.+......+||. |.||..|+.+|++.+ ..||+|+.++..+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~-----H~f~~~Ci~~~~~~~--~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCK-----HAFHRKCLIKWLEVR--KVCPLCNMPVLQL 65 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTT-----EEEEHHHHHHHHHHC--SBCTTTCCBCSSC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCC-----CEecHHHHHHHHHcC--CcCCCcCcccccc
Confidence 467899999887554445567887 999999999999874 5999999998754
No 5
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=3.1e-09 Score=80.48 Aligned_cols=51 Identities=24% Similarity=0.674 Sum_probs=42.2
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
+++..|.||++++.+++....+||. |.||..|+.+|++. +.+||+|+.++.
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~-----H~fh~~Ci~~w~~~--~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCN-----HEFHAKCVDKWLKA--NRTCPICRADSG 71 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTT-----EEEETTHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCC-----CHhHHHHHHHHHHc--CCcCcCcCCcCC
Confidence 3567999999887555555678988 99999999999987 468999998875
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.74 E-value=4.6e-09 Score=79.75 Aligned_cols=52 Identities=21% Similarity=0.643 Sum_probs=42.6
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+.+......+||. |.||..|+.+|++. +.+||+|+.++..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCN-----HLFHDSCIVPWLEQ--HDSCPVCRKSLTG 64 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTS-----CEEETTTTHHHHTT--TCSCTTTCCCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCC-----CeecHHHHHHHHHc--CCcCcCcCCccCC
Confidence 3567999999887544445667988 99999999999975 4799999999875
No 7
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.72 E-value=3.5e-09 Score=75.24 Aligned_cols=50 Identities=32% Similarity=0.749 Sum_probs=41.2
Q ss_pred CCCeeeecccccccCCCccccc-cccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilP-C~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
++..|.||++++.+++....+| |+ |.||.+|+.+|++. +.+||+|+.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~-----H~f~~~Ci~~w~~~--~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCG-----HGFHAECVDMWLGS--HSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSC-----CEECTTHHHHTTTT--CCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCC-----CcccHHHHHHHHHc--CCcCcCCCCEeE
Confidence 4678999999886555566777 87 99999999999976 578999998764
No 8
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.69 E-value=7.9e-09 Score=81.66 Aligned_cols=51 Identities=29% Similarity=0.666 Sum_probs=42.5
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
+++..|.||++++.+++....+||+ |.||..|+.+|++. +.+||+|+..+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~-----H~Fh~~Ci~~wl~~--~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCH-----HYFHKPCVSIWLQK--SGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTT-----EEEEHHHHHHHHTT--TCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCC-----ChHHHHHHHHHHHc--CCcCcCcCccCC
Confidence 3567999999887555556678988 99999999999975 569999999875
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.58 E-value=3.2e-08 Score=80.13 Aligned_cols=52 Identities=23% Similarity=0.431 Sum_probs=40.4
Q ss_pred CCeeeecccccccCC---------------CccccccccCCccccccHHHHHHHHHh---cCCcccccccccccc
Q 018762 104 EAVCRICFIELGEGF---------------DALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQEVEN 160 (350)
Q Consensus 104 e~~CRICl~e~~e~~---------------e~lilPC~CkGsl~~vH~~CL~kWl~~---kg~~~CeICk~~y~~ 160 (350)
+..|.||++.+.+.. ....+||. |.||..||.+|+.. +.+.+||+|+..|..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~-----H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCS-----HAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSC-----CEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCC-----CcccHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 458999998874321 11157898 99999999999965 346899999999874
No 10
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.56 E-value=3e-08 Score=70.16 Aligned_cols=50 Identities=22% Similarity=0.510 Sum_probs=40.8
Q ss_pred CCCeeeecccccccCC-CccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGF-DALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~-e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
++..|.||++.+.+.+ ....+||. |.||.+|+.+|++.+ ..||+|+.++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCG-----HLLHRTCYEEMLKEG--YRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTS-----CEEETTHHHHHHHHT--CCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCC-----CcccHHHHHHHHHcC--CcCCCCCCcCC
Confidence 4568999998874433 35678998 999999999999885 89999998764
No 11
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=2.8e-08 Score=77.14 Aligned_cols=50 Identities=20% Similarity=0.474 Sum_probs=36.8
Q ss_pred CCeeeeccccccc-----------CCCccccc-cccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 104 EAVCRICFIELGE-----------GFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 104 e~~CRICl~e~~e-----------~~e~lilP-C~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+..|.||++++.+ ++....+| |+ |.||.+|+.+|++.+ .+||+|++++..
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~-----H~FH~~Ci~~Wl~~~--~~CP~CR~~~~~ 76 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECN-----HSFHNCCMSLWVKQN--NRCPLCQQDWVV 76 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTS-----CEEEHHHHHHHTTTC--CBCTTTCCBCCE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCC-----CccChHHHHHHHHhC--CCCCCcCCCcch
Confidence 3457777766532 22344555 87 999999999999874 699999999774
No 12
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=1.1e-07 Score=73.05 Aligned_cols=54 Identities=22% Similarity=0.435 Sum_probs=43.6
Q ss_pred CCCCeeeecccccccCCC-ccccccccCCccccccHHHHHHHHHhc-CCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFD-ALKMECGCKGELAFAHRECAVKWFSIK-GNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e-~lilPC~CkGsl~~vH~~CL~kWl~~k-g~~~CeICk~~y~~ 160 (350)
+++..|.||++.+.+.+. +..+||. |.||..|+.+|++.+ +...||+|+..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCG-----HTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSS-----CEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred cCCCCCccCCccccccCCCeEECCCC-----ChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 356789999988754332 6778998 999999999999875 45899999998764
No 13
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=5.9e-08 Score=71.19 Aligned_cols=51 Identities=22% Similarity=0.477 Sum_probs=40.6
Q ss_pred CCCCeeeecccccccC----CCccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~----~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
+++..|.||++.+.+. .....++|. |.||.+|+.+|+.. +..||+|+.++.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSS-----CEEEHHHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCC-----ChhcHHHHHHHHHc--CCCCCCCCCccC
Confidence 3567899999877432 112568898 99999999999987 579999999875
No 14
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.45 E-value=1.4e-07 Score=71.44 Aligned_cols=50 Identities=28% Similarity=0.505 Sum_probs=42.2
Q ss_pred CCCCeeeecccccccCCCccccc-cccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilP-C~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
+++..|.||++.+. ++..+| |. |.||+.|+.+|+..++...||+|+.++.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMT---DAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCT---TCEECSSSC-----CEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHh---CCeEcCCCC-----CHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 35689999997763 467788 88 9999999999999877789999999754
No 15
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=2.9e-07 Score=70.51 Aligned_cols=48 Identities=23% Similarity=0.531 Sum_probs=40.6
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
++...|.||++.+ .++..+||. |.||+.|+.+|+.. ...||+|+..+.
T Consensus 13 ~~~~~C~IC~~~~---~~p~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAF---QNPVVTKCR-----HYFCESCALEHFRA--TPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBC---CSEEECTTS-----CEEEHHHHHHHHHH--CSBCSSSCCBCC
T ss_pred CCCCCCcCCCchh---cCeeEccCC-----CHhHHHHHHHHHHC--CCcCCCcCcccc
Confidence 3567999999776 346778998 99999999999976 579999999986
No 16
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.41 E-value=9.1e-08 Score=70.85 Aligned_cols=52 Identities=21% Similarity=0.475 Sum_probs=41.5
Q ss_pred CCCCeeeecccccccC----CCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~----~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+.+. .....++|. |.||.+|+.+|++.+ .+||+|+..+..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCC-----ChHhHHHHHHHHHcC--CCCCCCCCccCh
Confidence 4567999999876432 223678898 999999999999874 699999999874
No 17
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=2.5e-07 Score=68.98 Aligned_cols=51 Identities=27% Similarity=0.581 Sum_probs=41.6
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh-cCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI-KGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~-kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++..+||. |.||..|+.+|++. +++..||+|+.++..
T Consensus 18 ~~~~~C~IC~~~~~---~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQ---KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCS---SEEECTTC-----CEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccC---CeEEcCCC-----ChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 35679999997753 46677998 99999999999974 356799999999764
No 18
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.37 E-value=1.6e-07 Score=70.33 Aligned_cols=48 Identities=21% Similarity=0.490 Sum_probs=40.3
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+ .++..+||. |.||..|+.+|+.. +..||+|+..+..
T Consensus 14 ~~~~C~IC~~~~---~~~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTC---VHPVSLPCK-----HVFCYLCVKGASWL--GKRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBC---SSEEEETTT-----EEEEHHHHHHCTTC--SSBCSSSCCBCCH
T ss_pred CCCCCccCCccc---CCCEEccCC-----CHHHHHHHHHHHHC--CCcCcCcCchhCH
Confidence 467899999775 346778998 99999999999975 4799999999874
No 19
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=3.8e-07 Score=67.24 Aligned_cols=50 Identities=22% Similarity=0.569 Sum_probs=40.9
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++..++|. |.||+.|+.+|++ +++..||+|+..+..
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLC---SPKQTECG-----HRFCESCMAALLS-SSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEES---SCCCCSSS-----CCCCHHHHHHHHT-TSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhc---CeeECCCC-----CHHHHHHHHHHHH-hCcCCCCCCCcCCCh
Confidence 45789999997763 45667998 9999999999997 456799999998763
No 20
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.31 E-value=3.2e-07 Score=67.60 Aligned_cols=50 Identities=26% Similarity=0.563 Sum_probs=40.7
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++... +....+||+ |.||..|+.+|+.. +..||+|+..+..
T Consensus 3 ~~~~~C~IC~~~~~--~~~~~~~C~-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 3 TVAERCPICLEDPS--NYSMALPCL-----HAFCYVCITRWIRQ--NPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCCSSCCSCCC--SCEEETTTT-----EEESTTHHHHHHHH--SCSTTTTCCCCCC
T ss_pred CCCCCCeeCCcccc--CCcEecCCC-----CeeHHHHHHHHHhC--cCcCcCCChhhHh
Confidence 35678999998753 224678998 99999999999976 4699999999875
No 21
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.31 E-value=2.9e-07 Score=75.88 Aligned_cols=50 Identities=20% Similarity=0.355 Sum_probs=38.3
Q ss_pred CCeeeecccccccC-------------C--CccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 104 EAVCRICFIELGEG-------------F--DALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 104 e~~CRICl~e~~e~-------------~--e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+..|.||++.+.+. + ....+||+ |.||..|+.+|+.. +.+||+|+.++..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~-----H~FH~~Ci~~Wl~~--~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCN-----HAFHFHCISRWLKT--RQVCPLDNREWEF 101 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTS-----CEEEHHHHHHHHTT--CSBCSSSCSBCCE
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccC-----cEECHHHHHHHHHc--CCcCcCCCCccee
Confidence 45799998776422 1 13457888 99999999999986 6799999999763
No 22
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=2.4e-07 Score=68.83 Aligned_cols=47 Identities=26% Similarity=0.692 Sum_probs=39.9
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++... + ..+||. |.||..|+.+|+. .+..||+|+.++..
T Consensus 14 ~~~~C~IC~~~~~---~-~~~~Cg-----H~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 14 DEEECCICMDGRA---D-LILPCA-----HSFCQKCIDKWSD--RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCSSSCCSCC---S-EEETTT-----EEECHHHHHHSSC--CCSSCHHHHHCTTC
T ss_pred CCCCCeeCCcCcc---C-cccCCC-----CcccHHHHHHHHH--CcCcCCCcCCcccC
Confidence 4679999998753 2 778998 9999999999998 47899999999874
No 23
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.27 E-value=7.7e-07 Score=69.38 Aligned_cols=50 Identities=28% Similarity=0.505 Sum_probs=42.8
Q ss_pred CCCCeeeecccccccCCCccccc-cccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilP-C~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
+++..|.||++.+. ++..+| |. |.|++.|+.+|+..++...||+|+..+.
T Consensus 11 ~~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMT---DAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECS---SCEECTTTC-----CEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhc---CceECCCCC-----CHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 45789999997763 577888 88 9999999999999877889999999874
No 24
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.26 E-value=2.8e-07 Score=66.57 Aligned_cols=51 Identities=22% Similarity=0.477 Sum_probs=40.9
Q ss_pred CCCeeeecccccccC----CCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~----~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+.+. .....++|+ |.||.+|+.+|++. +..||+|+..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCC-----CchhHHHHHHHHHc--CCCCCCCCccCCc
Confidence 356899999876432 223568898 99999999999987 5799999999875
No 25
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.26 E-value=1.2e-06 Score=66.23 Aligned_cols=50 Identities=26% Similarity=0.581 Sum_probs=41.6
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhc----CCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK----GNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~k----g~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++..+||. |.||+.|+.+|+..+ +...||+|+..+..
T Consensus 18 ~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLK---EPVSADCN-----HSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCS---SCEECTTS-----CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhC---cceeCCCC-----CHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 5678999997753 45678988 999999999999884 37899999999874
No 26
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=1.3e-06 Score=63.74 Aligned_cols=45 Identities=27% Similarity=0.620 Sum_probs=36.9
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhc-CCcccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK-GNKTCEVC 154 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~k-g~~~CeIC 154 (350)
+++..|.||++.+. ++..+||. |.||+.|+.+|++.+ ++..||+|
T Consensus 18 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQ---KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCS---SCEECTTS-----SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhC---CeEEeCCC-----CcchHHHHHHHHHcCCCCCcCcCC
Confidence 45679999997763 46777998 999999999999853 46799998
No 27
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=1.3e-06 Score=66.13 Aligned_cols=51 Identities=29% Similarity=0.656 Sum_probs=42.0
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh----cCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI----KGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~----kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++..+||. |.||..|+.+|+.. .+...||+|+..+..
T Consensus 17 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLT---QPLSLDCG-----HSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCS---SCBCCSSS-----CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccC---CceeCCCC-----CHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 35679999998763 46667988 99999999999987 357899999999874
No 28
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=9.6e-07 Score=62.81 Aligned_cols=45 Identities=29% Similarity=0.778 Sum_probs=36.7
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh-cCCcccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI-KGNKTCEVC 154 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~-kg~~~CeIC 154 (350)
+++..|.||++.+. ++..+||. |.||++|+.+|+.. +++..||+|
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLK---EPVIIECG-----HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCS---SCCCCSSC-----CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccC---ccEeCCCC-----CccCHHHHHHHHHhcCCCCCCCCC
Confidence 35679999998763 35668998 99999999999874 467899998
No 29
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.23 E-value=1e-06 Score=66.13 Aligned_cols=49 Identities=29% Similarity=0.477 Sum_probs=40.1
Q ss_pred CCCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++.. .+|. |.||..|+.+|++. +..||+|+..+..
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 13 TPYILCSICKGYLI---DATTITECL-----HTFCKSCIVRHFYY--SNRCPKCNIVVHQ 62 (72)
T ss_dssp CGGGSCTTTSSCCS---SCEECSSSC-----CEECHHHHHHHHHH--CSSCTTTCCCCCS
T ss_pred CCCCCCCCCChHHH---CcCEECCCC-----CHHHHHHHHHHHHc--CCcCCCcCcccCc
Confidence 35679999997763 3554 4998 99999999999976 5799999999875
No 30
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.17 E-value=1.1e-06 Score=66.59 Aligned_cols=50 Identities=24% Similarity=0.422 Sum_probs=41.8
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+ .++..+||. |.|++.|+.+|+.. ++.+||+|+..+..
T Consensus 6 ~~~~~C~IC~~~~---~~Pv~~~Cg-----H~fc~~Ci~~~~~~-~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 6 PEYFRCPISLELM---KDPVIVSTG-----QTYERSSIQKWLDA-GHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSSCTTTSCCC---SSEEEETTT-----EEEEHHHHHHHHTT-TCCBCTTTCCBCSS
T ss_pred cccCCCCCccccc---cCCEEcCCC-----CeecHHHHHHHHHH-CcCCCCCCcCCCCh
Confidence 3578999999775 347778998 99999999999974 57899999998763
No 31
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=9.5e-07 Score=68.94 Aligned_cols=53 Identities=23% Similarity=0.473 Sum_probs=40.0
Q ss_pred CCCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++....|.||++.... +. .-. .|. +.||..|+.+||+.+++.+||+|+.++..
T Consensus 12 ~~~i~~C~IC~~~i~~-g~-~C~--~C~---h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 12 PDAVKICNICHSLLIQ-GQ-SCE--TCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SSSSCBCSSSCCBCSS-SE-ECS--SSC---CEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred cCCCCcCcchhhHccc-CC-ccC--CCC---chhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 3456799999987642 21 111 343 88999999999998877999999988774
No 32
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.11 E-value=4.1e-07 Score=76.59 Aligned_cols=50 Identities=20% Similarity=0.405 Sum_probs=0.4
Q ss_pred CCeeeeccccccc-------------CCC--ccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 104 EAVCRICFIELGE-------------GFD--ALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 104 e~~CRICl~e~~e-------------~~e--~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++.|.||++++.+ +++ .+..+|+ |.||..|+.+|+.. +.+||+|+.++..
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~-----H~FH~~CI~~Wl~~--~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCN-----HAFHFHCISRWLKT--RQVCPLDNREWEF 112 (117)
T ss_dssp C-----------------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcC-----ceEcHHHHHHHHHc--CCcCCCCCCeeee
Confidence 3589999988743 112 2235787 99999999999987 5799999999763
No 33
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.05 E-value=9.4e-07 Score=66.60 Aligned_cols=51 Identities=29% Similarity=0.599 Sum_probs=41.8
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhc-----CCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK-----GNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~k-----g~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++..+||. |.||+.|+.+|+..+ +...||+|+..+..
T Consensus 10 ~~~~~C~IC~~~~~---~p~~l~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLT---EPLSLDCG-----HSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECS---SCCCCSSS-----CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccC---CeeECCCC-----CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 35679999998763 46668998 999999999999863 36899999999864
No 34
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.94 E-value=1.5e-06 Score=73.24 Aligned_cols=48 Identities=21% Similarity=0.648 Sum_probs=39.9
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+ .++..+||+ |.||..|+.+|+.. +..||+|+..+..
T Consensus 52 ~~~~C~iC~~~~---~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 52 NELQCIICSEYF---IEAVTLNCA-----HSFCSYCINEWMKR--KIECPICRKDIKS 99 (138)
T ss_dssp HHSBCTTTCSBC---SSEEEETTS-----CEEEHHHHHHHTTT--CSBCTTTCCBCCC
T ss_pred ccCCCcccCccc---CCceECCCC-----CCccHHHHHHHHHc--CCcCCCCCCcCCC
Confidence 346799999776 346788998 99999999999975 5789999998764
No 35
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.92 E-value=2.7e-06 Score=68.15 Aligned_cols=49 Identities=24% Similarity=0.574 Sum_probs=41.2
Q ss_pred CCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++.. .+|. |.||+.|+.+|+..++ ..||+|+..+..
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~FC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 21 EVFRCFICMEKLR---DARLCPHCS-----KLCCFSCIRRWLTEQR-AQCPHCRAPLQL 70 (100)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTC-----CEEEHHHHHHHHHHTC-SBCTTTCCBCCG
T ss_pred CCCCCccCCcccc---CccccCCCC-----ChhhHHHHHHHHHHCc-CCCCCCCCcCCH
Confidence 5679999998763 4666 8998 9999999999999753 799999999864
No 36
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.87 E-value=5.1e-06 Score=67.50 Aligned_cols=53 Identities=21% Similarity=0.447 Sum_probs=42.6
Q ss_pred CCCeeeecccccccC----CCccccccccCCccccccHHHHHHHHHhcCCcccccccccccccc
Q 018762 103 EEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENLP 162 (350)
Q Consensus 103 ee~~CRICl~e~~e~----~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~vp 162 (350)
++..|.||++.+.+. .....++|+ |.||.+|+.+|++. +..||+|+..+....
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINHKR 62 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTC-----CEEEHHHHHHHHTT--CSBCTTTCCBCTTTC
T ss_pred CCCCCcccChhhhCccccccCeEecCCC-----ChhhHHHHHHHHHh--CCCCCCCCCcCcccc
Confidence 467899999887432 223678998 99999999999986 469999999998654
No 37
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.87 E-value=6.1e-06 Score=60.54 Aligned_cols=52 Identities=17% Similarity=0.364 Sum_probs=39.7
Q ss_pred CCCeeeeccc-ccccCCC-ccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFI-ELGEGFD-ALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~-e~~e~~e-~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++ .+.+... ...++|+ |.||..|+.+|+.. ++..||+|+..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCG-----HTLCESCVDLLFVR-GAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTC-----CCEEHHHHHHHHHT-TSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCC-----CHhHHHHHHHHHHc-CCCcCCCCCCcccc
Confidence 3568999998 4432221 2457998 99999999999874 56889999999874
No 38
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.82 E-value=8.6e-06 Score=80.42 Aligned_cols=55 Identities=29% Similarity=0.660 Sum_probs=40.6
Q ss_pred CCCCeeeecccccccCCCccccccc---cCCccccccHHHHHHHHHhcCC---------ccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECG---CKGELAFAHRECAVKWFSIKGN---------KTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~---CkGsl~~vH~~CL~kWl~~kg~---------~~CeICk~~y~ 159 (350)
++...|.||++...++++.-...|. |+ |.||..||.+||+...+ ..||.|++++.
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~---h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCV---LKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCC---CCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred cCCccCcccceeecCCCCCccccccCCccC---CccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 4678999999887543443334453 54 89999999999987432 58999999866
No 39
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.81 E-value=5.1e-06 Score=68.44 Aligned_cols=49 Identities=16% Similarity=0.371 Sum_probs=40.7
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++..+||. |.||+.|+.+|+.. +...||+|+..+..
T Consensus 51 ~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVF---RPITTVCQ-----HNVCKDCLDRSFRA-QVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCS---SEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHc---CcEEeeCC-----CcccHHHHHHHHhH-CcCCCCCCCccCCC
Confidence 4578999997763 56778998 99999999999983 45799999999864
No 40
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.78 E-value=5.3e-06 Score=65.69 Aligned_cols=48 Identities=25% Similarity=0.514 Sum_probs=39.3
Q ss_pred CCCeeeecccccccCCCcccc-ccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lil-PC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++... ||+ |.||+.|+.+|+.. +..||+|+..+..
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFN---IAMIIPQCS-----HNYCSLCIRKFLSY--KTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTC-----CEEEHHHHHHHHTT--CCBCTTTCCBCCG
T ss_pred CCCCcccCChhhC---CcCEECCCC-----CHhhHHHHHHHHHC--CCCCCCCCCcCCh
Confidence 4679999997763 35555 898 99999999999985 4799999998774
No 41
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.75 E-value=2.2e-05 Score=61.10 Aligned_cols=56 Identities=23% Similarity=0.394 Sum_probs=43.6
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENLP 162 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~vp 162 (350)
+++..|.||++.+. ..+....||.|. |.|++.|+.+|... ++..||+|+..|..-+
T Consensus 9 ~~~~~CpICle~~~-~~d~~~~p~~CG---H~fC~~Cl~~~~~~-~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 9 EDPVECPLCMEPLE-IDDINFFPCTCG---YQICRFCWHRIRTD-ENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCBCTTTCCBCC-TTTTTCCSSTTS---CCCCHHHHHHHTTS-SCSBCTTTCCBCSSCS
T ss_pred ccCCcCCccCccCc-cccccccccCCC---CCcCHHHHHHHHhc-CCCCCCCCCCccCCCc
Confidence 35678999998763 344566786663 89999999999764 5789999999998643
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.75 E-value=7e-06 Score=65.66 Aligned_cols=50 Identities=22% Similarity=0.599 Sum_probs=40.4
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhc-CCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK-GNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~k-g~~~CeICk~~y~~ 160 (350)
+...|.||++.+ .++..+||. |.||..|+.+|+..+ +...||+|+..+..
T Consensus 20 ~~~~C~IC~~~~---~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELI---KEPVSTKCD-----HIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCC---SSCCBCTTS-----CCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhh---cCeEECCCC-----CHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 356899999775 245668998 999999999999864 34689999998763
No 43
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.72 E-value=1.5e-05 Score=64.68 Aligned_cols=52 Identities=21% Similarity=0.476 Sum_probs=40.8
Q ss_pred CCCCeeeecccccccC----CCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~----~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+.+. ......+|+ |.||..|+.+|++. +.+||+|+..+..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTS-----BEEEHHHHHHHHHH--CSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCC-----ChhhHHHHHHHHHc--CCCCCCCCCcCCh
Confidence 3567899999876431 123567787 99999999999987 4699999999874
No 44
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.70 E-value=1.1e-05 Score=64.85 Aligned_cols=48 Identities=25% Similarity=0.551 Sum_probs=39.9
Q ss_pred CCCeeeecccccccCCCcccc-ccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lil-PC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++... ||. |.||..|+.+|+.. +..||+|+..+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFI---DATTIIECL-----HSFCKTCIVRYLET--SKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCS---SEEEETTTC-----CEEEHHHHHHHHTS--CSBCTTTCCBSCS
T ss_pred CcCCCccCChHHh---CcCEeCCCC-----ChhhHHHHHHHHHh--CCcCcCCCccccc
Confidence 4679999997763 46665 998 99999999999986 4899999999874
No 45
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.70 E-value=1.5e-05 Score=68.64 Aligned_cols=49 Identities=27% Similarity=0.628 Sum_probs=40.0
Q ss_pred CCCeeeecccccccCCCcccc-ccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lil-PC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++... ||. |.||..|+.+|+.. ++..||+|+..+..
T Consensus 53 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLK---NTMTTKECL-----HRFCADCIITALRS-GNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCS---SEEEETTTC-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhh---CcCEeCCCC-----ChhHHHHHHHHHHh-CcCCCCCCCCcCCC
Confidence 4579999997763 35555 898 99999999999985 46899999999853
No 46
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.60 E-value=3.7e-05 Score=62.96 Aligned_cols=50 Identities=26% Similarity=0.557 Sum_probs=41.0
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++..+||. |.|++.|+.+|+..++ ..||+|+..+..
T Consensus 16 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 65 (118)
T 3hct_A 16 ESKYECPICLMALR---EAVQTPCG-----HRFCKACIIKSIRDAG-HKCPVDNEILLE 65 (118)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHHHC-SBCTTTCCBCCG
T ss_pred CCCCCCCcCChhhc---CeEECCcC-----ChhhHHHHHHHHhhCC-CCCCCCCCCcCH
Confidence 35679999997753 46778888 9999999999998753 499999998774
No 47
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.58 E-value=7e-06 Score=66.63 Aligned_cols=50 Identities=20% Similarity=0.479 Sum_probs=41.5
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++..+||. |.||..|+.+|+.. ++..||+|+..+..
T Consensus 13 ~~~~~C~iC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILV---EPVTLPCN-----HTLCKPCFQSTVEK-ASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCS---SCEECTTS-----CEECHHHHCCCCCT-TTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccC---ceeEcCCC-----CHHhHHHHHHHHhH-CcCCCCCCCcccCc
Confidence 35689999997752 46778998 99999999999974 46899999999874
No 48
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.56 E-value=1.9e-05 Score=68.13 Aligned_cols=49 Identities=16% Similarity=0.497 Sum_probs=40.9
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+ .++..+||. |.|++.|+.+|+.. +...||+|+..+..
T Consensus 77 ~~~~C~IC~~~~---~~pv~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 77 QSFMCVCCQELV---YQPVTTECF-----HNVCKDCLQRSFKA-QVFSCPACRHDLGQ 125 (150)
T ss_dssp HHTBCTTTSSBC---SSEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCT
T ss_pred cCCEeecCChhh---cCCEEcCCC-----CchhHHHHHHHHHh-CCCcCCCCCccCCC
Confidence 457899999775 346778998 99999999999985 45689999999874
No 49
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.48 E-value=3.2e-05 Score=62.82 Aligned_cols=49 Identities=20% Similarity=0.493 Sum_probs=40.7
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+ .++..+||. |.||..|+.+|+... ...||+|+..+..
T Consensus 22 ~~~~C~IC~~~~---~~p~~~~Cg-----H~fC~~Ci~~~~~~~-~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 22 KSISCQICEHIL---ADPVETSCK-----HLFCRICILRCLKVM-GSYCPSCRYPCFP 70 (116)
T ss_dssp HHTBCTTTCSBC---SSEEECTTS-----CEEEHHHHHHHHHHT-CSBCTTTCCBCCG
T ss_pred CCCCCCCCCcHh---cCcEEcCCC-----CcccHHHHHHHHhHC-cCcCCCCCCCCCH
Confidence 467899999775 346678998 999999999999873 5689999999774
No 50
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=97.47 E-value=0.00013 Score=57.13 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=41.4
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
.++..|-||++-+ .++..+||+ |.|-+.|+.+|+.. +.+||+|+..+..
T Consensus 12 p~~~~CpI~~~~m---~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLM---TDPVRLPSG-----TVMDRSIILRHLLN--SPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBC---SSEEECTTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCCG
T ss_pred chheECcccCchh---cCCeECCCC-----CEECHHHHHHHHhc--CCCCCCCcCCCCh
Confidence 3678999998765 358889987 88999999999985 5799999998764
No 51
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=97.35 E-value=9.4e-05 Score=73.59 Aligned_cols=49 Identities=22% Similarity=0.556 Sum_probs=41.3
Q ss_pred CCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccccc
Q 018762 104 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 104 e~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
...|.||++.. .++..+||. |.+|..|+.+|+.. +...||+|+..+...
T Consensus 332 ~~~C~ICle~~---~~pv~lpCG-----H~FC~~Ci~~wl~~-~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 332 FQLCKICAEND---KDVKIEPCG-----HLMCTSCLTSWQES-EGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSBCTTTSSSB---CCEEEETTC-----CEECHHHHHHHHHH-TCSBCTTTCCBCCEE
T ss_pred CCCCCccCcCC---CCeEEeCCC-----ChhhHHHHHHHHhc-CCCCCCCCCCccCCc
Confidence 46999998765 357789999 89999999999984 467999999998863
No 52
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.33 E-value=9.5e-05 Score=54.77 Aligned_cols=50 Identities=20% Similarity=0.383 Sum_probs=38.7
Q ss_pred CCCCeeeecccccccCCCccc--cccccCCcccc-ccHHHHHHHHHhcCCccccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALK--MECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li--lPC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
+.+..|.||++.. .+... .||+ |. +-.+|+.+|.+. +..||+|+..+..+
T Consensus 5 ~~~~~C~IC~~~~---~~~~~~~~pCg-----H~~~C~~C~~~~~~~--~~~CPiCR~~i~~~ 57 (63)
T 2vje_B 5 NLLKPCSLCEKRP---RDGNIIHGRTG-----HLVTCFHCARRLKKA--GASCPICKKEIQLV 57 (63)
T ss_dssp GGGSBCTTTSSSB---SCEEEEETTEE-----EEEECHHHHHHHHHT--TCBCTTTCCBCCEE
T ss_pred CcCCCCcccCCcC---CCeEEEecCCC-----CHhHHHHHHHHHHHh--CCcCCCcCchhhce
Confidence 4567999999763 23333 4999 87 899999999865 47999999998753
No 53
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.33 E-value=0.00027 Score=53.30 Aligned_cols=47 Identities=19% Similarity=0.411 Sum_probs=37.8
Q ss_pred CCCCCeeeecccccccCCCccccccccCCcccc-ccHHHHHHHHHhcCCccccccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lilPC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
.+++..|.||++.. .+...+||. |. +-..|+.+ ...||+|+..+...
T Consensus 12 ~~~~~~C~IC~~~~---~~~v~~pCg-----H~~~C~~C~~~------~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 12 EENSKDCVVCQNGT---VNWVLLPCR-----HTCLCDGCVKY------FQQCPMCRQFVQES 59 (68)
T ss_dssp CCCSSCCSSSSSSC---CCCEETTTT-----BCCSCTTHHHH------CSSCTTTCCCCCCE
T ss_pred CCCCCCCCCcCcCC---CCEEEECCC-----ChhhhHHHHhc------CCCCCCCCcchhce
Confidence 34567999999763 457789999 88 99999983 37899999998863
No 54
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=97.28 E-value=0.00019 Score=58.02 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=41.5
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
.++..|-||++-+ .++..+||+ |.|-+.|+.+|+.. +.+||+|+..+..
T Consensus 27 p~~~~CpI~~~~m---~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLM---TDPVRLPSG-----TIMDRSIILRHLLN--SPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBC---SSEEEETTT-----EEEEHHHHHHHTTS--CSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcc---cCCeECCCC-----CEEchHHHHHHHHc--CCCCCCCCCCCCh
Confidence 3678999998765 368889987 88999999999974 6799999998764
No 55
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.18 E-value=8.4e-05 Score=63.48 Aligned_cols=50 Identities=24% Similarity=0.462 Sum_probs=40.7
Q ss_pred CCCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
.+++..|.||++.+. ++..++|. |.|++.|+.+|+.. +...||+|+.++.
T Consensus 28 l~~~~~C~IC~~~~~---~pv~~~Cg-----H~FC~~Ci~~~~~~-~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 28 LEAKYLCSACRNVLR---RPFQAQCG-----HRYCSFCLASILSS-GPQNCAACVHEGI 77 (141)
T ss_dssp CCGGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHGGG-SCEECHHHHHTTC
T ss_pred CCcCcCCCCCChhhc---CcEECCCC-----CccCHHHHHHHHhc-CCCCCCCCCCccc
Confidence 356789999997753 46778888 99999999999974 5579999999753
No 56
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=97.13 E-value=0.00022 Score=52.93 Aligned_cols=49 Identities=29% Similarity=0.461 Sum_probs=37.8
Q ss_pred CCCeeeecccccccCCCcccc--ccccCCcccc-ccHHHHHHHHHhcCCccccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKM--ECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lil--PC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
++..|.||++.. .+...+ ||+ |. +=.+|+.+|.+. +..||+|+..+..+
T Consensus 7 ~~~~C~IC~~~~---~~~~~~~~pCg-----H~~~C~~C~~~~~~~--~~~CPiCR~~i~~~ 58 (64)
T 2vje_A 7 AIEPCVICQGRP---KNGCIVHGKTG-----HLMACFTCAKKLKKR--NKPCPVCRQPIQMI 58 (64)
T ss_dssp GGSCCTTTSSSC---SCEEEEETTEE-----EEEECHHHHHHHHHT--TCCCTTTCCCCCEE
T ss_pred CcCCCCcCCCCC---CCEEEECCCCC-----ChhhHHHHHHHHHHc--CCcCCCcCcchhce
Confidence 456899999764 234444 998 88 458999999974 56899999998753
No 57
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.12 E-value=5.9e-05 Score=57.29 Aligned_cols=45 Identities=24% Similarity=0.619 Sum_probs=37.9
Q ss_pred CCCeeeecccccccCCCccccccccCCcccc-ccHHHHHHHHHhcCCccccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
++..|.||++.. .++..+||. |. +...|+.+| ..||+|+..+...
T Consensus 23 ~~~~C~iC~~~~---~~~~~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~~ 68 (74)
T 4ic3_A 23 EEKLCKICMDRN---IAIVFVPCG-----HLVTCKQCAEAV------DKCPMCYTVITFK 68 (74)
T ss_dssp HHTBCTTTSSSB---CCEEEETTC-----CBCCCHHHHTTC------SBCTTTCCBCSEE
T ss_pred cCCCCCCCCCCC---CCEEEcCCC-----ChhHHHHhhhcC------ccCCCcCcCccCc
Confidence 467999999764 356778998 88 999999999 6899999998853
No 58
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.07 E-value=0.00011 Score=52.93 Aligned_cols=45 Identities=16% Similarity=0.260 Sum_probs=37.0
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.+. ++..+||. |.|+..|+.+| ...||+|+.++..
T Consensus 5 ~~~~C~IC~~~~~---~p~~l~Cg-----H~fC~~Ci~~~-----~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 5 QFLRCQQCQAEAK---CPKLLPCL-----HTLCSGCLEAS-----GMQCPICQAPWPL 49 (56)
T ss_dssp CCSSCSSSCSSCB---CCSCSTTS-----CCSBTTTCSSS-----SSSCSSCCSSSSC
T ss_pred cCCCceEeCCccC---CeEEcCCC-----CcccHHHHccC-----CCCCCcCCcEeec
Confidence 5678999997763 46778998 89999999883 5789999998763
No 59
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.04 E-value=7.4e-05 Score=61.04 Aligned_cols=45 Identities=18% Similarity=0.374 Sum_probs=38.1
Q ss_pred CCCeeeecccccccCCCcccc-ccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lil-PC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
++..|.||++.+ .++..+ ||. |.|++.|+.+|+. ..||+|+..+.
T Consensus 21 ~~~~C~IC~~~~---~~pv~~~~Cg-----H~fC~~Ci~~~~~----~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNIL---REPVCLGGCE-----HIFCSNCVSDCIG----TGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCC---SSCBCCCSSS-----CCBCTTTGGGGTT----TBCSSSCCBCS
T ss_pred hCCCCCCCChHh---hCccEeCCCC-----CHHHHHHHHHHhc----CCCcCCCCcCc
Confidence 467999999775 346667 898 9999999999997 68999999975
No 60
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.01 E-value=0.00045 Score=62.46 Aligned_cols=49 Identities=12% Similarity=0.096 Sum_probs=40.8
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+...|.||++-+ .+++++||. |-|-+.|+.+|+..++ .+||+|+.++..
T Consensus 207 ~~~~c~i~~~~~---~dPv~~~~g-----h~f~~~~i~~~~~~~~-~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELM---REPCITPSG-----ITYDRKDIEEHLQRVG-HFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBC---SSEEECSSC-----CEEETTHHHHHHHHTC-SSCTTTCCCCCG
T ss_pred cccCCcCcCCHh---cCCeECCCC-----CEECHHHHHHHHHHCC-CCCcCCCCCCch
Confidence 567999998765 368899997 8999999999998754 449999998864
No 61
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=96.93 E-value=0.00093 Score=53.80 Aligned_cols=50 Identities=10% Similarity=0.056 Sum_probs=40.7
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
.++..|-||++-+ .++..+||. -|-|-+.|+.+|+.. +.+||+|+..+..
T Consensus 20 p~~~~CpI~~~~m---~dPV~~~cG----~htf~r~cI~~~l~~--~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLM---CDPVVLPSS----RVTVDRSTIARHLLS--DQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBC---SSEEECTTT----CCEEEHHHHHHHTTT--SCBCTTTCSBCCT
T ss_pred cHhcCCcCccccc---cCCeECCCC----CeEECHHHHHHHHHh--CCCCCCCCCCCCh
Confidence 3678999998765 357888876 167899999999985 5699999998764
No 62
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=96.67 E-value=0.00097 Score=57.41 Aligned_cols=50 Identities=26% Similarity=0.557 Sum_probs=40.8
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+++..|.||++.+. ++...+|. |.|.+.|+.+|+..++ .+||+|+..+..
T Consensus 16 ~~~~~C~IC~~~~~---~pv~~~Cg-----H~fC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALR---EAVQTPCG-----HRFCKACIIKSIRDAG-HKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHHHC-SBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhc---CcEECCCC-----CHHHHHHHHHHHHhCC-CCCCCCccCcch
Confidence 45789999997763 46777887 9999999999998743 599999988764
No 63
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.54 E-value=0.0016 Score=51.51 Aligned_cols=48 Identities=19% Similarity=0.392 Sum_probs=39.4
Q ss_pred CCCCeeeecccccccCCCccccc-cccCCccccccHHHHHHHHHhc----CCccccc--cccc
Q 018762 102 EEEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIK----GNKTCEV--CKQE 157 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilP-C~CkGsl~~vH~~CL~kWl~~k----g~~~CeI--Ck~~ 157 (350)
+++..|.||++-+ .+++.+| |. |.|-+.|+.+|+... +..+||+ |+..
T Consensus 5 ~~~~~CPI~~~~~---~dPV~~~~cG-----h~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEM---KKPVKNKVCG-----HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBC---SSEEEESSSC-----CEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchh---cCCEEcCCCC-----CeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 3568999999776 3588886 98 899999999999874 3579999 9865
No 64
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.42 E-value=0.00065 Score=51.40 Aligned_cols=44 Identities=25% Similarity=0.652 Sum_probs=35.8
Q ss_pred CCCeeeecccccccCCCccccccccCCcccc-ccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++.. .++..+||. |. +...|+.+ ...||+|+.++..
T Consensus 24 ~~~~C~IC~~~~---~~~~~~pCg-----H~~~C~~C~~~------~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRN---IAIVFVPCG-----HLVTCKQCAEA------VDKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSC---CCBCCSSSC-----CCCBCHHHHHH------CSBCTTTCCBCCC
T ss_pred CCCCCCcCCCCC---CCEEEecCC-----CHHHHHHHhhC------CCCCccCCceecC
Confidence 457899999764 356778998 88 99999964 3789999999875
No 65
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=96.41 E-value=0.0019 Score=57.95 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=41.4
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
++..|.||++-+ .++++.||+ |-|=+.|+.+|+...+. +||+|+.++..
T Consensus 105 ~~f~CPI~~elm---~DPV~~~~G-----htfer~~I~~~l~~~~~-tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELM---REPCITPSG-----ITYDRKDIEEHLQRVGH-FDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBC---SSEEECTTS-----CEEEHHHHHHHHHHTCS-BCTTTCCBCCG
T ss_pred HhhcccCccccC---CCCeECCCC-----CEECHHHHHHHHHhCCC-CCCCCcCCCCh
Confidence 678999998776 358889997 89999999999987554 79999998764
No 66
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=96.13 E-value=0.0026 Score=58.96 Aligned_cols=50 Identities=24% Similarity=0.527 Sum_probs=38.4
Q ss_pred CCeeeecccccccCCCccccccc-cCCccccccHHHHHHHHHhcCCccccccccccccc
Q 018762 104 EAVCRICFIELGEGFDALKMECG-CKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 104 e~~CRICl~e~~e~~e~lilPC~-CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
-..|.||.+-... + .-|. |. +.+|..|+.+|++.+++..||.|+.....-
T Consensus 180 i~~C~iC~~iv~~-g----~~C~~C~---~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 180 VKICNICHSLLIQ-G----QSCETCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp CCBCTTTCSBCSS-C----EECSSSC---CEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCcCcchhhHHhC-C----cccCccC---hHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 5789999866532 1 2232 43 789999999999988889999999987753
No 67
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.0038 Score=59.36 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=42.2
Q ss_pred CCCCeeeecccccccCCCcccc-ccccCCccccccHHHHHHHHHhcCCccccc--ccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEV--CKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lil-PC~CkGsl~~vH~~CL~kWl~~kg~~~CeI--Ck~~y~~ 160 (350)
..+..|.||++-+ .+++.. .|+ |.|=+.|+.+|+..++...||+ |+..+..
T Consensus 179 ~~el~CPIcl~~f---~DPVts~~CG-----HsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 179 KIELTCPITCKPY---EAPLISRKCN-----HVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp BCCSBCTTTSSBC---SSEEEESSSC-----CEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred ceeeECcCccCcc---cCCeeeCCCC-----CcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 4568999999776 356764 888 8999999999998777889999 9998764
No 68
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=95.98 E-value=0.0034 Score=49.17 Aligned_cols=50 Identities=16% Similarity=0.422 Sum_probs=37.8
Q ss_pred CCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHHhc---C---Cccccc--ccccc
Q 018762 103 EEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSIK---G---NKTCEV--CKQEV 158 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~~k---g---~~~CeI--Ck~~y 158 (350)
+...|.||+++.. ..+... .+|. |.|.++|+.+++..+ | ...||. |+..+
T Consensus 4 ~~~~C~IC~~~~~-~~~~~~l~~Cg-----H~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~ 62 (94)
T 1wim_A 4 GSSGCKLCLGEYP-VEQMTTIAQCQ-----CIFCTLCLKQYVELLIKEGLETAISCPDAACPKQG 62 (94)
T ss_dssp SBCCCSSSCCCCB-GGGEEEETTTT-----EEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCC
T ss_pred CCcCCcccCcccc-cccceEcCCCC-----CcccHHHHHHHHHHHhhcCCcccccCccccCCCCC
Confidence 4678999998763 223333 4798 999999999999764 2 469999 99883
No 69
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=95.42 E-value=0.0023 Score=62.40 Aligned_cols=45 Identities=24% Similarity=0.728 Sum_probs=38.0
Q ss_pred CCCeeeecccccccCCCccccccccCCcccc-ccHHHHHHHHHhcCCccccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
++..|.||++.. .++..+||. |. +...|+.+| ..||+|+..+...
T Consensus 294 ~~~~C~IC~~~~---~~~v~lpCg-----H~~fC~~C~~~~------~~CP~CR~~i~~~ 339 (345)
T 3t6p_A 294 EERTCKVCMDKE---VSVVFIPCG-----HLVVCQECAPSL------RKCPICRGIIKGT 339 (345)
T ss_dssp TTCBCTTTSSSB---CCEEEETTC-----CEEECTTTGGGC------SBCTTTCCBCCEE
T ss_pred CCCCCCccCCcC---CceEEcCCC-----ChhHhHHHHhcC------CcCCCCCCCccCe
Confidence 568999999764 357778999 88 999999998 6899999998853
No 70
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=95.23 E-value=0.0036 Score=48.30 Aligned_cols=45 Identities=29% Similarity=0.716 Sum_probs=36.7
Q ss_pred CCCeeeecccccccCCCccccccccCCcccc-ccHHHHHHHHHhcCCccccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~-vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
++..|.||++.. .+...+||+ |. +=..|+.+| ..||+|+..+...
T Consensus 17 ~~~~C~IC~~~~---~~~v~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 17 EAMLCMVCCEEE---INSTFCPCG-----HTVCCESCAAQL------QSCPVCRSRVEHV 62 (79)
T ss_dssp HHTBCTTTSSSB---CCEEEETTC-----BCCBCHHHHTTC------SBCTTTCCBCCEE
T ss_pred CCCEeEEeCccc---CcEEEECCC-----CHHHHHHHHHhc------CcCCCCCchhhCe
Confidence 457899998764 357789999 77 779999987 3999999999863
No 71
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=94.37 E-value=0.014 Score=44.27 Aligned_cols=55 Identities=22% Similarity=0.353 Sum_probs=37.1
Q ss_pred CCCCCCCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHHh--cCCccccccccccccc
Q 018762 98 EDIPEEEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEVENL 161 (350)
Q Consensus 98 e~i~eee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~y~~v 161 (350)
++.+..+..|.||... ++.+. .-|. +.||..|+.-.+.. ++.+.|+.|...-...
T Consensus 6 ~~~~~~~~~C~vC~~~----~~ll~Cd~C~-----~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~p~ 63 (66)
T 2lri_C 6 QQNLAPGARCGVCGDG----TDVLRCTHCA-----AAFHWRCHFPAGTSRPGTGLRCRSCSGDVTPA 63 (66)
T ss_dssp TTCCCTTCCCTTTSCC----TTCEECSSSC-----CEECHHHHCTTTCCCCSSSCCCTTTTTCCCCC
T ss_pred ccCCCCCCCcCCCCCC----CeEEECCCCC-----CceecccCCCccCcCCCCCEECccccCCCccC
Confidence 3444556789999743 23221 2233 78999999887765 4789999998765433
No 72
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=94.36 E-value=0.02 Score=42.30 Aligned_cols=47 Identities=6% Similarity=0.050 Sum_probs=37.6
Q ss_pred CeeeecccccccCCCcccc-ccccCCccccccHHHHHHHHHhcCCccccccccccccc
Q 018762 105 AVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 105 ~~CRICl~e~~e~~e~lil-PC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
..|.||++-+. ++.+. +|. +-+=++|+++|++.++ +||+++.++...
T Consensus 4 ~~CpIs~~~m~---dPV~~~~sG-----~~yer~~I~~~l~~~~--~cP~t~~~L~~~ 51 (61)
T 2bay_A 4 MLCAISGKVPR---RPVLSPKSR-----TIFEKSLLEQYVKDTG--NDPITNEPLSIE 51 (61)
T ss_dssp CCCTTTCSCCS---SEEEETTTT-----EEEEHHHHHHHHHHHS--BCTTTCCBCCGG
T ss_pred EEecCCCCCCC---CCEEeCCCC-----cEEcHHHHHHHHHhCC--CCcCCcCCCChh
Confidence 57999987653 57777 676 7899999999998754 599999988753
No 73
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=87.25 E-value=0.6 Score=37.93 Aligned_cols=52 Identities=29% Similarity=0.481 Sum_probs=38.7
Q ss_pred CCCeeeecccccc--cCCCccc--cccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 103 EEAVCRICFIELG--EGFDALK--MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 103 ee~~CRICl~e~~--e~~e~li--lPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
+..+|.||-++.+ +.+++++ +.|. --+=+.|.+-=.+. |+..|+.||+.|+-
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~-----FPvCrpCyEYErke-G~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECG-----FPACRPCYEYERRE-GTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSC-----CCCCHHHHHHHHHT-SCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccC-----ChhhHHHHHHHHhc-cCccccccCCcccc
Confidence 4579999987654 3455553 4455 34788999887765 89999999999984
No 74
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=86.94 E-value=0.19 Score=39.85 Aligned_cols=56 Identities=25% Similarity=0.421 Sum_probs=35.4
Q ss_pred CCCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
.+++..|.||.....+.++.+ +-|. +=-..||..|+.-=..-.|.+.|+.|.....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~l-l~CD--~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVI-LFCD--MCNLAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEE-EECS--SSCCCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred CCCCCcCCcCCCCCCCCCCCE-EECC--CCCchhhcccCCCCccCCCceECccccCccc
Confidence 346789999986532222233 2332 1125799999974334468899999987654
No 75
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=86.00 E-value=0.49 Score=38.08 Aligned_cols=50 Identities=24% Similarity=0.485 Sum_probs=32.4
Q ss_pred CCCCCeeeecccccccCCCccc--cccccCCccccccHHHHHHHHHh--cCCcccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEV 158 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~li--lPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~y 158 (350)
+++...| ||.... .++ ++ --|.|+. .+||..|+. +.. ++.+.|+.|+..-
T Consensus 33 ~~e~~yC-iC~~~~--~g~-MI~CD~~dC~~--~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 33 PNEPTYC-LCHQVS--YGE-MIGCDNPDCSI--EWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp SCCCBCS-TTCCBC--CSC-CCCCSCSSCSC--CCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCCCcEE-ECCCCC--CCC-EeEecCCCCCC--CCEecccCC--cCcCCCCCEECcCccCcC
Confidence 4466788 997653 222 32 2344642 589999997 433 3679999997653
No 76
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=84.29 E-value=0.37 Score=36.77 Aligned_cols=51 Identities=24% Similarity=0.468 Sum_probs=32.3
Q ss_pred CCCCCeeeecccccccCCCcccc--ccccCCccccccHHHHHHHHHh--cCCccccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKM--ECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEVE 159 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lil--PC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~y~ 159 (350)
+++...| ||.... .++ ++. -|.|.. .+||..|+. +.. ++.+.|+.|...-+
T Consensus 13 ~~~~~~C-~C~~~~--~g~-MI~CD~~~C~~--~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 13 PNEPTYC-LCHQVS--YGE-MIGCDNPDCSI--EWFHFACVG--LTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp TTSCCCS-TTCCCS--CSS-EECCSCSSCSC--CCEETTTTT--CSSCCSSCCCCTTTSSCSS
T ss_pred CCCCCEE-ECCCCC--CCC-EeEeeCCCCCC--ccEecccCC--cCcCCCCCEECCCCCcccc
Confidence 4466788 897653 232 322 233542 589999998 443 37899999976533
No 77
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=81.01 E-value=0.076 Score=42.06 Aligned_cols=56 Identities=16% Similarity=0.287 Sum_probs=36.8
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHH------hcCCcccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS------IKGNKTCEVCKQEVEN 160 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~------~kg~~~CeICk~~y~~ 160 (350)
|++..|.+|.....+.++.++.==.|. ..+|..|+.-=+. -++.+.|+.|....+.
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~---~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~ 75 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECH---NLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKR 75 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSC---CEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCC
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCC---CeEcCccCCCcccccccCCCCCCeeCccccchhhh
Confidence 356799999866433233333211222 7899999976543 3578999999887664
No 78
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=77.80 E-value=1.3 Score=36.57 Aligned_cols=48 Identities=21% Similarity=0.488 Sum_probs=35.8
Q ss_pred eeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCccccccccccccc
Q 018762 106 VCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 161 (350)
Q Consensus 106 ~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~v 161 (350)
.|-+|.-... --....||+ |.|=++|+..|-+. ++++|+.|+.++..+
T Consensus 3 fC~~C~~Pi~--iygRmIPCk-----HvFCydCa~~~~~~-~~k~Cp~C~~~V~rV 50 (101)
T 3vk6_A 3 FCDKCGLPIK--VYGRMIPCK-----HVFCYDCAILHEKK-GDKMCPGCSDPVQRI 50 (101)
T ss_dssp BCTTTCSBCS--EEEEEETTC-----CEEEHHHHHHHHHT-TCCBCTTTCCBCSEE
T ss_pred ecCccCCCeE--EEeeecccc-----ccHHHHHHHHHHhc-cCCCCcCcCCeeeee
Confidence 3555643321 112357999 99999999999875 578999999999976
No 79
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=76.41 E-value=0.42 Score=36.51 Aligned_cols=51 Identities=29% Similarity=0.585 Sum_probs=33.0
Q ss_pred CCCeeeecccccccCCCccccccc-cCCccccccHHHHHHHHHhcCCccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECG-CKGELAFAHRECAVKWFSIKGNKTCEVCKQE 157 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~-CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~ 157 (350)
++..|.||.....+.++.++ -|. |. ..+|..|+.-=..-+|.+.|+.|...
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll-~CD~C~---~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVIL-FCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEE-ECSSSC---CEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEE-ECCCCC---CccccccCCCCcCCCCCcCCccCcCc
Confidence 56789999865422333332 222 22 68999999743344688999999764
No 80
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=76.18 E-value=0.34 Score=36.64 Aligned_cols=52 Identities=13% Similarity=0.192 Sum_probs=32.8
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh--cCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~y~ 159 (350)
+...|.||.... .++.++. |. +=-.++|..|+.--... .+.+.|+.|.....
T Consensus 17 ~~~~C~~C~~~~--~~~~mi~-CD--~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 17 QIWICPGCNKPD--DGSPMIG-CD--DCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp EEECBTTTTBCC--SSCCEEE-CS--SSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCcCCCCCCCCC--CCCCEEE-cC--CCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 456899997653 2333322 21 11279999999754332 26799999987655
No 81
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.06 E-value=0.34 Score=38.66 Aligned_cols=51 Identities=24% Similarity=0.468 Sum_probs=31.5
Q ss_pred CCCCeeeecccccccCCCcccccc-ccCCccccccHHHHHHHH--HhcCCcccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVKWF--SIKGNKTCEVCKQEV 158 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC-~CkGsl~~vH~~CL~kWl--~~kg~~~CeICk~~y 158 (350)
++...|.||..... . +.+ +-| .|. ..+|..|+.-=+ .-++.+.|+.|...-
T Consensus 14 ~~~~~C~vC~~~~~-~-~~l-l~CD~C~---~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~ 67 (92)
T 2e6r_A 14 IDSYICQVCSRGDE-D-DKL-LFCDGCD---DNYHIFCLLPPLPEIPRGIWRCPKCILAE 67 (92)
T ss_dssp CCCCCCSSSCCSGG-G-GGC-EECTTTC---CEECSSSSSSCCSSCCSSCCCCHHHHHHH
T ss_pred cCCCCCccCCCcCC-C-CCE-EEcCCCC---chhccccCCCCcccCCCCCcCCccCcCcc
Confidence 35678999986532 1 222 223 232 689999996212 224789999997653
No 82
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=71.96 E-value=1 Score=33.08 Aligned_cols=47 Identities=19% Similarity=0.398 Sum_probs=31.0
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHH--hcCCccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 157 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~--~kg~~~CeICk~~ 157 (350)
++..|.+|... ++.+. |. +=-+.+|..|+..=+. -++.+.|+.|..+
T Consensus 10 ~~~~C~vC~~~----g~ll~--CD--~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG----GEIIL--CD--TCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC----SSEEE--CS--SSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCC----CcEEE--CC--CCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 46789999753 23332 21 2226899999986443 2478999999764
No 83
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=71.74 E-value=0.82 Score=32.01 Aligned_cols=45 Identities=22% Similarity=0.407 Sum_probs=27.4
Q ss_pred eeeecccccccCCCccc-cccccCCccccccHHHHHHHHHh--cCCcccccccc
Q 018762 106 VCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQ 156 (350)
Q Consensus 106 ~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~ 156 (350)
.|.+|.... ++++.+. ..|. +.+|..|+.-=+.. ++.+.|+.|..
T Consensus 2 ~C~vC~~~~-~~~~ll~Cd~C~-----~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKG-EDDKLILCDECN-----KAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSS-CCSCCEECTTTC-----CEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCC-CCCCEEECCCCC-----hhhCcccCCCCcCCCCCCcEECcCccc
Confidence 588997653 2222221 2233 78999999532222 46789999965
No 84
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=71.25 E-value=2 Score=32.49 Aligned_cols=51 Identities=16% Similarity=0.238 Sum_probs=31.1
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHH-------hcCCcccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS-------IKGNKTCEVCKQEV 158 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~-------~kg~~~CeICk~~y 158 (350)
++...| ||.... .++.++.==.|+ .++|..|+.-=-. ......|+.|....
T Consensus 14 ~~~~~C-~C~~~~--~~~~MI~Cd~C~---~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 14 PNALYC-ICRQPH--NNRFMICCDRCE---EWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TTCCCS-TTCCCC--CSSCEEECSSSC---CEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCCEE-ECCCcc--CCCCEEEeCCCC---CcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 346778 787654 233444322343 7999999842111 23579999998654
No 85
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=69.16 E-value=0.44 Score=42.57 Aligned_cols=49 Identities=24% Similarity=0.452 Sum_probs=32.7
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh--cCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~y~ 159 (350)
++..|.+|..+ ++ + +-| .+--+.+|..|+..-+.. +|.+.|+.|...-+
T Consensus 6 ~~~~C~~C~~~----g~-l-l~C--d~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNG----GD-L-LCC--EKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCC----EE-E-EEC--SSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCC----Cc-e-EEc--CCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 45689999744 22 2 222 233378999999766543 47899999987644
No 86
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=68.48 E-value=0.46 Score=35.41 Aligned_cols=47 Identities=21% Similarity=0.366 Sum_probs=30.9
Q ss_pred CCCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHH--hcCCccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 157 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~--~kg~~~CeICk~~ 157 (350)
+++..|.+|... ++.+. ..|. ..+|..|+..=+. -++.+.|+.|...
T Consensus 6 ~~~~~C~vC~~~----g~ll~CD~C~-----~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDG----GELICCDGCP-----RAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCC----SSCEECSSCC-----CEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCC----CCEEEcCCCC-----hhhcccccCCCcCcCCCCCeECccccCc
Confidence 457799999853 23322 2233 6899999974332 2478999999754
No 87
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=68.32 E-value=0.66 Score=40.56 Aligned_cols=49 Identities=22% Similarity=0.424 Sum_probs=32.4
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh--cCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~y~ 159 (350)
++..|.+|..+ ++.+ -|. +=-..+|..|+..-+.. +|.+.|+.|+..-.
T Consensus 3 ~~~~C~~C~~~----g~ll--~Cd--~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 3 NEDWCAVCQNG----GELL--CCE--KCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp SCSSCTTTCCC----SSCE--ECS--SSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCccccCCCC----Ceee--ecC--CCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 45689999744 2322 222 22278999998665543 47899999987543
No 88
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=68.16 E-value=0.72 Score=33.90 Aligned_cols=46 Identities=22% Similarity=0.358 Sum_probs=30.2
Q ss_pred CCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHHh--cCCccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQE 157 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~ 157 (350)
++..|.+|... ++.+. .-|. +.+|..|+..=+.. ++.+.|+.|...
T Consensus 8 ~~~~C~vC~~~----g~ll~Cd~C~-----~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 8 HMEFCRVCKDG----GELLCCDTCP-----SSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCCC----SSCBCCSSSC-----CCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCcCCCCCCC----CCEEEcCCCC-----HHHcccccCCCcCcCCCCccCChhhcCc
Confidence 46789999743 23221 2243 67999999743332 477999999765
No 89
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=66.69 E-value=1.1 Score=36.16 Aligned_cols=45 Identities=20% Similarity=0.340 Sum_probs=26.2
Q ss_pred CCCeeeecccccccCCCcc-ccccccCCccccccHHHHHHHHHh--cCCccccc
Q 018762 103 EEAVCRICFIELGEGFDAL-KMECGCKGELAFAHRECAVKWFSI--KGNKTCEV 153 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~l-ilPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeI 153 (350)
+++.|.||.... +.++.+ =..|. +.+|..||...+.. ++.+.|+-
T Consensus 6 ~~~~C~~C~~~g-~~~~ll~C~~C~-----~~~H~~Cl~~~~~~~~~~~W~C~~ 53 (111)
T 2ysm_A 6 SGANCAVCDSPG-DLLDQFFCTTCG-----QHYHGMCLDIAVTPLKRAGWQCPE 53 (111)
T ss_dssp CCSCBTTTCCCC-CTTTSEECSSSC-----CEECTTTTTCCCCTTTSTTCCCTT
T ss_pred CCCCCcCCCCCC-CCcCCeECCCCC-----CCcChHHhCCccccccccCccCCc
Confidence 567999997653 211212 12333 78999999876642 24444433
No 90
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=64.67 E-value=0.65 Score=34.14 Aligned_cols=47 Identities=21% Similarity=0.473 Sum_probs=29.6
Q ss_pred CCCCeeeecccccccCCCcccc--ccccCCccccccHHHHHHHHHh--cCCcccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKM--ECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQ 156 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lil--PC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~ 156 (350)
++...| ||.... .+ .++. -|.|+ ..++|..|+. +.. .+.+.|+.|..
T Consensus 8 ~e~~~C-~C~~~~--~g-~mi~CD~cdC~--~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 8 NEPTYC-LCHQVS--YG-EMIGCDNPDCS--IEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp -CCEET-TTTEEC--CS-EEEECSCTTCS--SCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCEE-ECCCcC--CC-CEEEeCCCCCC--CceEehhcCC--CCcCCCCCEECcCccC
Confidence 456778 897653 22 2322 34454 2589999998 543 37799999864
No 91
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=64.56 E-value=1.4 Score=37.95 Aligned_cols=52 Identities=17% Similarity=0.310 Sum_probs=32.5
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHH---hcCCcccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS---IKGNKTCEVCKQEV 158 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~---~kg~~~CeICk~~y 158 (350)
++...| +|..... ++..++.=-.|. .++|..|+.---. ..+...|+.|+..-
T Consensus 6 ~~~~~C-~C~~~~~-~~~~mi~Cd~C~---~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 6 DTKLYC-ICKTPED-ESKFYIGCDRCQ---NWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp -CCEET-TTTEECC-TTSCEEECTTTC---CEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCcEe-eCCCCCC-CCCCEeECCCCC---chhChhhcCCchhhccCccCeecCCCcchh
Confidence 356799 9986642 223343322443 8999999953222 24679999998764
No 92
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=64.30 E-value=0.64 Score=37.29 Aligned_cols=48 Identities=25% Similarity=0.391 Sum_probs=31.4
Q ss_pred CCCCeeeecccccccCCCccc--cccccCCccccccHHHHHHHHHh--cCCccccc-cccc
Q 018762 102 EEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSI--KGNKTCEV-CKQE 157 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li--lPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeI-Ck~~ 157 (350)
++...| ||.... .++ ++ --|.|.. .+||..|+. |.. .+.+.|+. |...
T Consensus 24 ~~~~yC-iC~~~~--~g~-MI~CD~c~C~~--eWfH~~CVg--l~~~p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 24 QEEVYC-FCRNVS--YGP-MVACDNPACPF--EWFHYGCVG--LKQAPKGKWYCSKDCKEI 76 (90)
T ss_dssp CCSCCS-TTTCCC--SSS-EECCCSSSCSC--SCEETTTSS--CSSCTTSCCCSSHHHHHH
T ss_pred CCCcEE-EeCCCC--CCC-EEEecCCCCcc--ccCcCccCC--CCcCCCCCccCChhhcch
Confidence 456788 897643 233 32 3455653 689999996 332 36899999 9843
No 93
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=63.03 E-value=3.7 Score=35.42 Aligned_cols=45 Identities=16% Similarity=0.354 Sum_probs=31.5
Q ss_pred CCCeeeecccccccCCCccc-cccccCCccccccHHHHHHHHH---------hcCCcccccccc
Q 018762 103 EEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFS---------IKGNKTCEVCKQ 156 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~---------~kg~~~CeICk~ 156 (350)
.+..|++|.++ ++.+. ..|. +.||..|+..=+. ..+.+.|+.|..
T Consensus 62 ~~d~C~vC~~G----G~LlcCD~Cp-----r~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEG----GNLICCDFCH-----NAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCC----SSEEECSSSC-----CEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCeecccCCC----CcEEeCCCCC-----CeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 35799999744 34332 2343 7899999996552 358899999974
No 94
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=61.53 E-value=5.2 Score=34.01 Aligned_cols=47 Identities=17% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHH------H---hcCCccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWF------S---IKGNKTCEVCKQE 157 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl------~---~kg~~~CeICk~~ 157 (350)
.+..|++|.++ ++.+ -| ++--+.||.+|+..=+ + ..+.+.|..|...
T Consensus 56 ~~~~C~vC~dG----G~Ll--cC--d~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 56 MDEQCRWCAEG----GNLI--CC--DFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CBSSCTTTCCC----SEEE--EC--SSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCcCeecCCC----CeeE--ec--CCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 45689999744 3333 12 2333899999999742 2 3578999999543
No 95
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=61.48 E-value=5.1 Score=30.54 Aligned_cols=53 Identities=13% Similarity=0.133 Sum_probs=32.6
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh---cCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~---kg~~~CeICk~~y~ 159 (350)
++...| ||..... .+..++.=-.|. .++|..|+.-=-.. -....|+.|.....
T Consensus 10 ~~~~~C-~C~~~~d-~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 10 LVPVYC-LCRQPYN-VNHFMIECGLCQ---DWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCCCS-TTSCSCC-SSSCEEEBTTTC---CEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred CCccEE-EcCCccC-CCCceEEcCCCC---CcEEeeecCcccccccCCCeEECCCcccccC
Confidence 356778 8976642 233444322343 79999999532221 25689999997654
No 96
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=60.99 E-value=0.84 Score=33.49 Aligned_cols=52 Identities=23% Similarity=0.439 Sum_probs=33.7
Q ss_pred CCCCeeeecccccccCCCccc--cccccCCccccccHHHHHHHHH-----hcCCcccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFS-----IKGNKTCEVCKQEV 158 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li--lPC~CkGsl~~vH~~CL~kWl~-----~kg~~~CeICk~~y 158 (350)
+++..|.+|.....+.++.++ ..|. ..+|..|+.-=+. .++.+.|+.|...-
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~-----~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCG-----QGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSC-----CEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCC-----hHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 356799999865323223332 2344 7899999875332 35789999997653
No 97
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=58.37 E-value=2.3 Score=34.07 Aligned_cols=49 Identities=20% Similarity=0.350 Sum_probs=28.2
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHH-HhcCCccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWF-SIKGNKTCEVCKQE 157 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl-~~kg~~~CeICk~~ 157 (350)
+...| ||.... +++.++.==.|. .++|..|+.-=. ...+.+.|+.|+..
T Consensus 27 d~vrC-iC~~~~--~~~~mi~Cd~C~---~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 27 DVTRC-ICGFTH--DDGYMICCDKCS---VWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CBCCC-TTSCCS--CSSCEEEBTTTC---BEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CCEEe-ECCCcc--CCCcEEEcCCCC---CcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 45677 786543 223443322333 799999985311 11246899999743
No 98
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=55.67 E-value=3.3 Score=34.03 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=28.1
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh--cCCccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCK 155 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk 155 (350)
+++..|.+|... ++ ..-|..++=-+.+|..|+. +.. +|++.|+-|.
T Consensus 13 ~~~~~C~~C~~~----G~--ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~ 60 (107)
T 4gne_A 13 MHEDYCFQCGDG----GE--LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQ 60 (107)
T ss_dssp SSCSSCTTTCCC----SE--EEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGB
T ss_pred CCCCCCCcCCCC----Cc--EeEECCCCCCcccccccCc--CCcCCCCCEECCCCC
Confidence 456789999732 22 3446521222699999998 543 4667776443
No 99
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.42 E-value=0.95 Score=32.52 Aligned_cols=46 Identities=24% Similarity=0.421 Sum_probs=28.9
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHH--hcCCcccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQ 156 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~--~kg~~~CeICk~ 156 (350)
++..|.+|... ++.+ -|. +=-+.+|..|+..=+. -++.+.|+.|..
T Consensus 8 ~~~~C~vC~~~----g~ll--~Cd--~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS----GQLL--MCD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS----SCCE--ECS--SSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC----CeEE--EcC--CCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 46789999753 2222 222 2227899999974332 246788988864
No 100
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=52.43 E-value=3.5 Score=33.62 Aligned_cols=49 Identities=20% Similarity=0.464 Sum_probs=27.2
Q ss_pred Ceeeeccccccc----C-CCccccccc-cCCccccccHHHHHHHHH-----hcCCc------cccccccc
Q 018762 105 AVCRICFIELGE----G-FDALKMECG-CKGELAFAHRECAVKWFS-----IKGNK------TCEVCKQE 157 (350)
Q Consensus 105 ~~CRICl~e~~e----~-~e~lilPC~-CkGsl~~vH~~CL~kWl~-----~kg~~------~CeICk~~ 157 (350)
..|.||+.+..+ + .+.++ -|. |. ..+|..||..... .++.+ .|.+|+..
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li-~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~ 67 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELV-SCADCG---RSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTS 67 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCE-ECSSSC---CEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCe-EeCCCC---CccchhhCCChhhhhhccCCCccCccccCccCccccc
Confidence 479999865421 1 12332 222 22 6799999976532 23555 45566653
No 101
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=50.51 E-value=7 Score=31.60 Aligned_cols=33 Identities=21% Similarity=0.491 Sum_probs=20.1
Q ss_pred CCeeeeccccccc----CCCccc--cccccCCccccccHHHHHH
Q 018762 104 EAVCRICFIELGE----GFDALK--MECGCKGELAFAHRECAVK 141 (350)
Q Consensus 104 e~~CRICl~e~~e----~~e~li--lPC~CkGsl~~vH~~CL~k 141 (350)
...|.+|+..... ..+.++ .-|. +.+|..||..
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~-----~~~H~~Cl~~ 43 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCG-----NSGHPSCLKF 43 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTC-----CEECHHHHTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcC-----CCCCCchhcC
Confidence 5689999865311 122333 2343 7899999953
No 102
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=48.32 E-value=18 Score=27.45 Aligned_cols=50 Identities=26% Similarity=0.603 Sum_probs=30.1
Q ss_pred CCCCCeeeecccccccCCCccccccc---cCCccccccHHHHHHHHHh-------cCCccccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKMECG---CKGELAFAHRECAVKWFSI-------KGNKTCEVCKQE 157 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lilPC~---CkGsl~~vH~~CL~kWl~~-------kg~~~CeICk~~ 157 (350)
+++...| ||.... .+..++ -|. |+ .++|..|+--=-.. .....|+.|+..
T Consensus 13 ~~~~~~C-iC~~~~--~~g~MI-~CD~~~C~---~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 13 PEIKVRC-VCGNSL--ETDSMI-QCEDPRCH---VWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCCCC-SSCCCC--CCSCEE-ECSSTTTC---CEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCCEEe-ECCCcC--CCCCEE-EECCccCC---ccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 4567888 797652 222332 343 54 59999999521111 136889999765
No 103
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=47.43 E-value=5.9 Score=32.46 Aligned_cols=46 Identities=24% Similarity=0.654 Sum_probs=33.5
Q ss_pred CCeeeecccccccCCCccccccccCCccccccHHHHHHHHHhcCCcccccccccccc
Q 018762 104 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 160 (350)
Q Consensus 104 e~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~~ 160 (350)
-..|+.|.-+. +.++ .|+ -||.=..||..-++. +..|+||+++...
T Consensus 28 ~~nCKsCWf~~----k~LV-~C~----dHYLCl~CLtlmL~~--SdrCpIC~~pLPt 73 (99)
T 2ko5_A 28 PQFCKSCWFEN----KGLV-ECN----NHYLCLNCLTLLLSV--SNRCPICKMPLPT 73 (99)
T ss_dssp CCCCCSSCSCC----SSEE-ECS----SCEEEHHHHHHTCSS--SSEETTTTEECCC
T ss_pred cccChhhcccc----CCee-eec----chhhHHHHHHHHHhh--ccCCcccCCcCCc
Confidence 36788887542 2343 354 289999999988875 6799999999764
No 104
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=46.48 E-value=1.3 Score=32.90 Aligned_cols=48 Identities=23% Similarity=0.500 Sum_probs=29.4
Q ss_pred CCCCCeeeecccccccCCCcccc--ccccCCccccccHHHHHHHHHh--cCCcccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKM--ECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQ 156 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lil--PC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~ 156 (350)
+++...| ||.... .+ .++. -|.|+ ..+||..|+. +.. ++.+.|+.|..
T Consensus 8 ~~e~~yC-~C~~~~--~g-~MI~CD~c~C~--~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 8 PNEPTYC-LCNQVS--YG-EMIGCDNEQCP--IEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp --CCEET-TTTEEC--CS-EEEECSCTTCS--SCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCCCcEE-ECCCCC--CC-CeeeeeCCCCC--cccEecccCC--cCcCCCCCEECcCccc
Confidence 3456788 897652 23 2322 34464 2699999997 333 36789999965
No 105
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=46.35 E-value=3.3 Score=42.11 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=32.5
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh---cCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~---kg~~~CeICk~~y~ 159 (350)
.+...| ||.... +.+..++.=..|. .++|..|+.-=-.. -+...|+.|.....
T Consensus 35 ~~~~yC-~C~~~~-d~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 90 (488)
T 3kv5_D 35 PPPVYC-VCRQPY-DVNRFMIECDICK---DWFHGSCVGVEEHHAVDIDLYHCPNCAVLHG 90 (488)
T ss_dssp CCCEET-TTTEEC-CTTSCEEEBTTTC---CEEEHHHHTCCGGGGGGEEEBCCHHHHHHHC
T ss_pred CCCeEE-eCCCcC-CCCCCeEEccCCC---CceeeeecCcCcccccCCCEEECCCCcCCcC
Confidence 345667 787654 2234455544565 79999999432111 14589999987644
No 106
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=45.65 E-value=5.6 Score=31.72 Aligned_cols=47 Identities=19% Similarity=0.425 Sum_probs=31.2
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh--cCCccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQE 157 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~~ 157 (350)
++..|.+|... ++.+. |.+=-+.+|..|+..=+.. +|.+.|+.|...
T Consensus 24 n~~~C~vC~~~----g~LL~----CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 24 SATICRVCQKP----GDLVM----CNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSCCSSSCSS----SCCEE----CTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCcCcCcCCC----CCEEE----CCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 56799999754 23332 2233378999999543322 478999999865
No 107
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=42.73 E-value=1.9 Score=31.29 Aligned_cols=49 Identities=22% Similarity=0.399 Sum_probs=31.0
Q ss_pred CCCeeeecccccccCCCccccccccCCccccccHHHHHHHHH--hcCCccccccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQEVE 159 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~--~kg~~~CeICk~~y~ 159 (350)
++..|.+|... ++.+ -|. +=-..+|..|+..=+. -++.+.|+.|.....
T Consensus 4 ~~~~C~vC~~~----g~ll--~Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 54 (60)
T 2puy_A 4 HEDFCSVCRKS----GQLL--MCD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQDQML 54 (60)
T ss_dssp CCSSCTTTCCC----SSCE--ECS--SSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHH
T ss_pred CCCCCcCCCCC----CcEE--EcC--CCCcCEECCcCCCCcCCCCCCceEChhccChhh
Confidence 45689999753 2222 222 2227899999984332 247799999976543
No 108
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=42.66 E-value=9.9 Score=28.30 Aligned_cols=48 Identities=23% Similarity=0.582 Sum_probs=27.3
Q ss_pred CCCeeeecccccccCCCcccccc--ccCCccccccHHHHHH----H--HH--hcCCccccccc
Q 018762 103 EEAVCRICFIELGEGFDALKMEC--GCKGELAFAHRECAVK----W--FS--IKGNKTCEVCK 155 (350)
Q Consensus 103 ee~~CRICl~e~~e~~e~lilPC--~CkGsl~~vH~~CL~k----W--l~--~kg~~~CeICk 155 (350)
....|.+|...+.+ +..+ .-| .|+ .+||..|+-- - +. ..+.+.|+-|.
T Consensus 7 ~~~~C~~C~~p~~~-~~~m-I~CD~~C~---~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVND-DQDA-ILCEASCQ---KWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCT-TSCE-EEBTTTTC---CEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCC-CCCe-EecccCcc---ccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 45689999977532 2222 334 354 7999999831 1 11 11356787775
No 109
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=42.13 E-value=1.6 Score=31.98 Aligned_cols=47 Identities=23% Similarity=0.414 Sum_probs=29.4
Q ss_pred CCCCeeeecccccccCCCccc--cccccCCccccccHHHHHHHHHh--cCCcccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQ 156 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li--lPC~CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~ 156 (350)
++...| ||.... .+ .++ --|.|+. .++|..|+. +.. ++.+.|+.|..
T Consensus 7 ~e~~yC-~C~~~~--~g-~mi~CD~~~C~~--~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYC-LCHQVS--YG-EMIGCDNPDCPI--EWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp -CCEET-TTTEEC--CS-EEEECSCTTCSS--CEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCcEE-ECCCCC--CC-CeeEeeCCCCCC--CCEecccCC--cccCCCCCEECcCccC
Confidence 356778 897653 23 232 2334542 589999998 443 36789999965
No 110
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.58 E-value=4.1 Score=30.85 Aligned_cols=52 Identities=19% Similarity=0.270 Sum_probs=31.6
Q ss_pred CCCCeeeecccccccCCCccc--cccccCCccccccHHHHHHHHHhcCCccccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 159 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~li--lPC~CkGsl~~vH~~CL~kWl~~kg~~~CeICk~~y~ 159 (350)
++...| ||.... .+ .++ .-|.|.. .+||.+|+.-=-...+.+.|+.|.....
T Consensus 4 ~~~~yC-~C~~~~--~g-~MI~CD~cdC~~--~WfH~~Cvgl~~~p~~~w~Cp~C~~~~~ 57 (70)
T 1x4i_A 4 GSSGYC-ICNQVS--YG-EMVGCDNQDCPI--EWFHYGCVGLTEAPKGKWYCPQCTAAMK 57 (70)
T ss_dssp SCCCCS-TTSCCC--CS-SEECCSCTTCSC--CCEEHHHHTCSSCCSSCCCCHHHHHHHH
T ss_pred CCCeEE-EcCCCC--CC-CEeEeCCCCCCc--cCCcccccccCcCCCCCEECCCCCcccc
Confidence 356677 486542 22 232 2355542 6999999972111246789999987654
No 111
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=37.32 E-value=10 Score=30.71 Aligned_cols=51 Identities=22% Similarity=0.498 Sum_probs=33.1
Q ss_pred CeeeecccccccCCCcccccc-ccCCccccccHHHHHH----H--H--HhcCCccccccccccc
Q 018762 105 AVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVK----W--F--SIKGNKTCEVCKQEVE 159 (350)
Q Consensus 105 ~~CRICl~e~~e~~e~lilPC-~CkGsl~~vH~~CL~k----W--l--~~kg~~~CeICk~~y~ 159 (350)
..|.||...+.+ +..++.=| .|+ .+||..|+.- - + ...+...|+.|...-.
T Consensus 4 ~~C~iC~~p~~~-~~~mi~Cdd~C~---~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVND-DQDAILCEASCQ---KWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCT-TSCEEECTTTTC---CEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCC-CCCEEEecCCcc---cccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 479999877533 23454444 686 7999999841 1 1 0125689999987644
No 112
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=35.48 E-value=5.5 Score=32.23 Aligned_cols=47 Identities=26% Similarity=0.542 Sum_probs=27.8
Q ss_pred CeeeecccccccCCCccccccc-cCCccccccHHHHHHHHHh--cCCcccccccc
Q 018762 105 AVCRICFIELGEGFDALKMECG-CKGELAFAHRECAVKWFSI--KGNKTCEVCKQ 156 (350)
Q Consensus 105 ~~CRICl~e~~e~~e~lilPC~-CkGsl~~vH~~CL~kWl~~--kg~~~CeICk~ 156 (350)
..|.+|.....+ ++.+ +-|. |. +.+|..|+..=+.. ++.+.|+.|+.
T Consensus 62 ~~C~vC~~~~~~-~~~l-l~Cd~C~---~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKN-ADNM-LFCDSCD---RGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCT-TCCC-EECTTTC---CEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CccccccCcCCC-ccce-EEcCCCC---CeeecccCCCCCCCCCCCCeECCCCCC
Confidence 367777654212 2222 2222 32 78999998644433 46799999975
No 113
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=34.50 E-value=5.6 Score=35.18 Aligned_cols=47 Identities=19% Similarity=0.415 Sum_probs=30.6
Q ss_pred CCeeeecccccccCCCccccccccCCccccccHHHHHHHHH--hcCCcccccccccc
Q 018762 104 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQEV 158 (350)
Q Consensus 104 e~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~--~kg~~~CeICk~~y 158 (350)
++.|.+|..+ ++.+ - |.+=-+.+|..|+..=+. -+|.+.|+.|...-
T Consensus 2 ~~~C~~C~~~----g~ll--~--Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKP----GDLV--M--CNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCC----SSCC--C--CTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCC----Ccee--E--CCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4579999744 2322 2 233337899999954332 25789999998763
No 114
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=33.82 E-value=8.3 Score=35.70 Aligned_cols=48 Identities=17% Similarity=0.253 Sum_probs=25.0
Q ss_pred CeeeecccccccCCCccccccccCCccccccHHHHHHHHH--hcC-Cccccccccc
Q 018762 105 AVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKG-NKTCEVCKQE 157 (350)
Q Consensus 105 ~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~--~kg-~~~CeICk~~ 157 (350)
..|.+|.... +++ .+ +-| .+=-..+|..||.-=+. -+| .+.|+.|..+
T Consensus 175 c~C~vC~~~~-~~~-~l-L~C--D~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 175 CACHLCGGRQ-DPD-KQ-LMC--DECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCSSSCCCC-C---CC-EEC--SSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCcCCCCCC-CCC-Ce-EEc--CCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 4688886542 222 22 222 12226899999973222 246 7899999754
No 115
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.18 E-value=5.5 Score=30.70 Aligned_cols=45 Identities=27% Similarity=0.347 Sum_probs=26.9
Q ss_pred eeeecccccccCCCccc-cccccCCccccccHHHHHHHHH--hcC-Ccccccccc
Q 018762 106 VCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFS--IKG-NKTCEVCKQ 156 (350)
Q Consensus 106 ~CRICl~e~~e~~e~li-lPC~CkGsl~~vH~~CL~kWl~--~kg-~~~CeICk~ 156 (350)
.|.+|.... ++++.+. -.|. +.+|..||.-=+. -+| .+.|+.|..
T Consensus 28 ~C~vC~~~~-~~~~ll~CD~C~-----~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKH-EPNMQLLCDECN-----VAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCC-CSTTEEECSSSC-----CEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcC-CCCCEEEcCCCC-----ccccccccCCCccCCCCCCCcCCcCccC
Confidence 788997542 2222221 2233 6899999873222 246 788998864
No 116
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=29.67 E-value=4.6 Score=30.43 Aligned_cols=47 Identities=19% Similarity=0.289 Sum_probs=26.7
Q ss_pred eeeecccccccCCCccccccccCCccccccHHHHHHHHHh--cC-Cccccccccc
Q 018762 106 VCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KG-NKTCEVCKQE 157 (350)
Q Consensus 106 ~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~--kg-~~~CeICk~~ 157 (350)
.|.+|.... .++.+ +-|. +=-+.+|..||.-=+.. +| .+.|+.|..+
T Consensus 20 ~C~~C~~~~--~~~~l-l~CD--~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQ--DPDKQ-LMCD--ECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCS--CGGGE-EECT--TTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcC--CCCCE-EEcC--CCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 566776432 12222 3333 22278999999732222 46 7899999754
No 117
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=25.46 E-value=24 Score=25.34 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=32.1
Q ss_pred CCCCeeeecccccccCCCccccccccCCccccccHHHHHHHHHh---cCCccccccccc
Q 018762 102 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQE 157 (350)
Q Consensus 102 eee~~CRICl~e~~e~~e~lilPC~CkGsl~~vH~~CL~kWl~~---kg~~~CeICk~~ 157 (350)
+++..|.||...+.+ ++.++.==.|. .++|..|+.--... -....|+.|..+
T Consensus 4 ~e~~~C~~C~~~~~~-~~~mI~Cd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAA-DEFWICCDLCE---MWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCS-SSCEEECSSSC---CEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCC-CCCEEEccCCC---CCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 356789999876532 23343311332 79999998643221 256889999764
No 118
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=23.90 E-value=5.4 Score=30.85 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=18.1
Q ss_pred ccccHHHHHHHHHh--cCC-cccccccc
Q 018762 132 AFAHRECAVKWFSI--KGN-KTCEVCKQ 156 (350)
Q Consensus 132 ~~vH~~CL~kWl~~--kg~-~~CeICk~ 156 (350)
+.+|..||.-=+.. ++. +.|+.|+.
T Consensus 49 ~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 49 MAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp CEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CccCcccCCCcccCCCCCCceECcCccc
Confidence 78999999854433 355 89999975
No 119
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=23.52 E-value=24 Score=26.02 Aligned_cols=49 Identities=27% Similarity=0.680 Sum_probs=27.6
Q ss_pred CCCCCeeeecccccccCCCcccccc---ccCCccccccHHHHHHHHH------hcCCcccccccc
Q 018762 101 PEEEAVCRICFIELGEGFDALKMEC---GCKGELAFAHRECAVKWFS------IKGNKTCEVCKQ 156 (350)
Q Consensus 101 ~eee~~CRICl~e~~e~~e~lilPC---~CkGsl~~vH~~CL~kWl~------~kg~~~CeICk~ 156 (350)
+++...| ||.... + +..+ .-| .|+ .++|..|+--=-. .-.+..|+.|+.
T Consensus 7 ~e~~v~C-~C~~~~-~-~g~m-I~CD~~~C~---~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 7 PEAKVRC-ICSSTM-V-NDSM-IQCEDQRCQ---VWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp SSCEECC-TTCCCS-C-CSCE-EECSCTTTC---EEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCCEEe-ECCCCc-C-CCCE-EEECCCCCC---CeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 4456677 786443 2 2233 335 375 6999999731000 012478999974
Done!