Query 018764
Match_columns 350
No_of_seqs 178 out of 1536
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 03:50:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018764.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018764hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 4E-107 9E-112 784.6 25.5 299 24-330 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 3E-100 7E-105 734.3 25.3 298 27-329 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 2.3E-71 5.1E-76 517.2 10.2 229 44-294 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 8.3E-69 1.8E-73 511.5 19.8 233 41-327 14-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 4.7E-66 1E-70 487.1 18.2 231 39-316 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.2E-64 2.5E-69 476.2 20.0 232 30-315 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 3.3E-62 7.2E-67 473.7 20.6 239 40-333 16-290 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 3.3E-62 7.2E-67 458.9 19.9 221 41-315 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 1E-58 2.2E-63 437.8 15.9 224 43-311 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 3E-55 6.5E-60 431.7 18.7 259 42-320 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.4E-52 3E-57 436.1 20.3 255 42-316 55-404 (716)
12 PRK15061 catalase/hydroperoxid 100.0 5.5E-49 1.2E-53 407.2 20.1 256 42-317 57-411 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.6E-49 3.5E-54 373.0 10.3 219 44-311 27-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.4E-37 3.1E-42 295.7 15.6 221 46-313 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.4E-32 3.1E-37 286.7 14.7 221 43-314 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 5.8E-32 1.3E-36 280.8 16.5 220 46-313 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 2.4E-28 5.2E-33 243.8 16.1 252 43-313 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.2 5.6E-11 1.2E-15 120.2 12.4 216 47-313 453-725 (730)
19 PF07172 GRP: Glycine rich pro 76.5 1.5 3.3E-05 35.7 1.6 18 1-18 1-18 (95)
20 PF11895 DUF3415: Domain of un 48.9 15 0.00033 29.1 2.3 32 297-332 2-33 (80)
21 PTZ00411 transaldolase-like pr 44.2 84 0.0018 31.4 7.3 49 138-186 180-231 (333)
22 PRK12309 transaldolase/EF-hand 29.0 1.2E+02 0.0026 30.9 5.9 65 121-186 155-225 (391)
23 KOG0400 40S ribosomal protein 20.7 58 0.0013 28.3 1.5 33 169-202 31-64 (151)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=4e-107 Score=784.56 Aligned_cols=299 Identities=45% Similarity=0.803 Sum_probs=283.8
Q ss_pred cccCCCcccccCCChhHHHHHHHHHHHHHHhCccccchhhhhhhccccccCCCcceeccCCCCCccccccCCCCCCcchh
Q 018764 24 AQAQLSPSFYNSTCPNVANIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDSTNTIDSEKFAAPNNNSARGF 103 (350)
Q Consensus 24 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~~gf 103 (350)
+.++|+++||++|||++|+||+++|++++.++|+++|++|||+||||||+||||||||+++ ..||++++|. +++||
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf 96 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY 96 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence 4567999999999999999999999999999999999999999999999999999999964 3799999998 88999
Q ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCC
Q 018764 104 EVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGL 183 (350)
Q Consensus 104 ~~I~~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 183 (350)
++|+.||++||++||++|||||||++||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999877664 899999999999999999999
Q ss_pred CCCccceeeccccccccccccccccccccCCCCC-CCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHH
Q 018764 184 NDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTG-KPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSN 262 (350)
Q Consensus 184 ~~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~n 262 (350)
+.+ |||+||||||||++||.+|.+|||||.|++ .+||+||+.|++.|+..||..+++...+++|+.||.+|||+||+|
T Consensus 176 ~~~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~n 254 (324)
T PLN03030 176 NTQ-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSN 254 (324)
T ss_pred CHH-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHH
Confidence 999 999999999999999999999999999875 489999999999999999964333346789999999999999999
Q ss_pred hhhcCcccccchhhcCCCccchHHHHHHhhhCh----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 018764 263 LRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQ----TAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 330 (350)
Q Consensus 263 l~~~~glL~SD~~L~~d~~~~T~~~V~~yA~d~----~~F~~~Fa~Am~KM~~lgvltg~~GeIR~~C~~vn 330 (350)
|+.++|+|+|||+|++|+ +|+++|++||.|+ +.|+++|++||+|||+|+||||.+||||++|+++|
T Consensus 255 ll~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 255 LKNGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHhcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999999 9999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.2e-100 Score=734.33 Aligned_cols=298 Identities=56% Similarity=0.934 Sum_probs=287.6
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHhCccccchhhhhhhccccccCCCcceeccCCCCCccccccCCCCCCcchhHHH
Q 018764 27 QLSPSFYNSTCPNVANIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDSTNTIDSEKFAAPNNNSARGFEVI 106 (350)
Q Consensus 27 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~~gf~~I 106 (350)
||+++||++|||++|+||+++|++.++++++++|++|||+||||||+||||||||+++++..+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 59999999999999999999999999999999999999999999999999999999887778999999998 78999999
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018764 107 DNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDK 186 (350)
Q Consensus 107 ~~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~ 186 (350)
+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|+.++.+..+ .+||.|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877655 7899999999999999999999999
Q ss_pred ccceeeccccccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhc
Q 018764 187 FDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLR 266 (350)
Q Consensus 187 ~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~ 266 (350)
|||+|+||||||++||.+|.+|||+|+|++.+||+||+.|+..|++.||...++...+++|+.||.+|||+||+||+.+
T Consensus 159 -d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 159 -DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred -HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 9999999999999999999999999999988999999999999999999765556678999999999999999999999
Q ss_pred CcccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccc
Q 018764 267 KGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRV 329 (350)
Q Consensus 267 ~glL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lgvltg~~GeIR~~C~~v 329 (350)
+|+|+|||+|+.|+ +|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|++|
T Consensus 238 ~glL~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDP--RTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999 99999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2.3e-71 Score=517.25 Aligned_cols=229 Identities=50% Similarity=0.847 Sum_probs=209.3
Q ss_pred HHHHHHHHHHhCccccchhhhhhhccccc-cCCCcceeccCCCCCccccccCCCCCCcchhHHHHHHHHHHHHhcCCCCc
Q 018764 44 IREVLQNAFLSDIRIGASLIRLHFHDCFV-NGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVS 122 (350)
Q Consensus 44 Vr~~v~~~~~~~~~~aa~lLRL~FHDcfv-~GcDgSill~~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~le~~cp~~VS 122 (350)
||++|++.++.+++++|++|||+|||||+ +|||||||+. ..|+++++|.++.+++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 47999999995444999999999999999999999
Q ss_pred HHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCCCCCccceeecccccccccc
Q 018764 123 CADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSGAHTFGRAQ 202 (350)
Q Consensus 123 cADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsGaHTiG~~h 202 (350)
|||||+||+|+||+.+|||.|+|++||+|+.+++..++ .+||.|..++++|++.|+++||+++ |||||+||||||++|
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~-e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAE-EMVALSGAHTIGRAH 153 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HH-HHHHHHGGGGSTEES
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchh-hhcceecccccccce
Confidence 99999999999999999999999999999999998777 7899999999999999999999999 999999999999999
Q ss_pred ccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhcCcccccchhhcCCCcc
Q 018764 203 CKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA 282 (350)
Q Consensus 203 c~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~~glL~SD~~L~~d~~~ 282 (350)
|.+|. ||| + .+||+||+.|+.. .| ..++++ .+++| ||.+|||+||++|+.++|+|+||++|++|+
T Consensus 154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~-- 218 (230)
T PF00141_consen 154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDP-- 218 (230)
T ss_dssp GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHST--
T ss_pred ecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCH--
Confidence 99999 999 5 5799999999988 89 433333 77888 999999999999999999999999999999
Q ss_pred chHHHHHHhhhC
Q 018764 283 DTAAIVEDFGRN 294 (350)
Q Consensus 283 ~T~~~V~~yA~d 294 (350)
+|+++|++||+|
T Consensus 219 ~t~~~V~~yA~d 230 (230)
T PF00141_consen 219 ETRPIVERYAQD 230 (230)
T ss_dssp THHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=8.3e-69 Score=511.45 Aligned_cols=233 Identities=29% Similarity=0.466 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHHhCccccchhhhhhhcccc-------ccCCCcceeccCCCCCccccccCCCCCCcchhHHHHHHHHHH
Q 018764 41 ANIIREVLQNAFLSDIRIGASLIRLHFHDCF-------VNGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAV 113 (350)
Q Consensus 41 e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSill~~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~l 113 (350)
-+.++++| ..+.++|.++|.+|||+||||| ++||||||++. .|+++++|.++.+||++|++||+++
T Consensus 14 ~~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~ 86 (289)
T PLN02608 14 IEKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc
Confidence 34566667 4477799999999999999999 89999999984 6999999984447999999999987
Q ss_pred HHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCCCCCccceeec
Q 018764 114 EKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS 193 (350)
Q Consensus 114 e~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs 193 (350)
++|||||||+||||+||+.+|||.|+|++||+|+++++. +.+||+|+.+++++++.|+++||+++ |||+|+
T Consensus 87 -----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~-D~VaLs 157 (289)
T PLN02608 87 -----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDK-DIVALS 157 (289)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHH-HHhhhc
Confidence 489999999999999999999999999999999998863 46899999999999999999999999 999999
Q ss_pred cccccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhc--Ccc--
Q 018764 194 GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLR--KGL-- 269 (350)
Q Consensus 194 GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~--~gl-- 269 (350)
||||||++||. |+ +|.|. +..||.+|||+||+|++.+ +|+
T Consensus 158 GAHTiG~ahc~----r~-g~~g~-------------------------------~~~Tp~~FDN~Yy~~ll~~~~~gll~ 201 (289)
T PLN02608 158 GGHTLGRAHPE----RS-GFDGP-------------------------------WTKEPLKFDNSYFVELLKGESEGLLK 201 (289)
T ss_pred ccccccccccc----CC-CCCCC-------------------------------CCCCCCccChHHHHHHHcCCcCCccc
Confidence 99999999995 54 43221 1268999999999999998 788
Q ss_pred cccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccc
Q 018764 270 LQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCR 327 (350)
Q Consensus 270 L~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lgvltg~~GeIR~~C~ 327 (350)
|+|||+|+.|+ +|+++|+.||.|++.|+++|++||+||++|+|+||++||+.+.-+
T Consensus 202 L~SD~~L~~d~--~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 202 LPTDKALLEDP--EFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred cccCHhhhcCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 79999999999 999999999999999999999999999999999999999988653
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=4.7e-66 Score=487.06 Aligned_cols=231 Identities=26% Similarity=0.397 Sum_probs=208.7
Q ss_pred hHHHHHHHHHHHHHHhCccccchhhhhhhccccccCCCcceeccCC---CCCccccccCCCCCCcchhHHHHHHHHHHHH
Q 018764 39 NVANIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDST---NTIDSEKFAAPNNNSARGFEVIDNMKAAVEK 115 (350)
Q Consensus 39 ~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~---~~~~~E~~~~~N~~~~~gf~~I~~iK~~le~ 115 (350)
..++||+++|++.++ +++++|++|||+|||||+ ||+|+++++. ..+.+|+++++|.++.+||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 568899999999999 999999999999999994 8888877542 23357999999985559999999999976
Q ss_pred hcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCCCCCccceeeccc
Q 018764 116 ACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSGA 195 (350)
Q Consensus 116 ~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsGa 195 (350)
| +|||||||+||||+||+.+|||.|+|++||||+.++....++.+||.|+.+++++++.|+++||+++ |||+|+||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~-d~VaLsGa 161 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQ-EIVALSGA 161 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHH-HHHHhccc
Confidence 4 8999999999999999999999999999999999998777778899999999999999999999999 99999999
Q ss_pred cccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhcCc-------
Q 018764 196 HTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKG------- 268 (350)
Q Consensus 196 HTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~~g------- 268 (350)
||||++||.. ++|.|. |..||.+|||+||+||+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 115899999999999999999
Q ss_pred -ccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCC
Q 018764 269 -LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLT 316 (350)
Q Consensus 269 -lL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lgvlt 316 (350)
+|+||++|+.|+ +|+++|+.||.|++.|+++|++||+||++++|..
T Consensus 206 ~~L~sD~~L~~d~--~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 206 LMLPTDKALLEDP--KFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred eechhhHHHHcCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999 9999999999999999999999999999999863
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.2e-64 Score=476.19 Aligned_cols=232 Identities=29% Similarity=0.517 Sum_probs=207.8
Q ss_pred cccccC--CChhHHHHHHHHHHHHHHhCccccchhhhhhhc-----ccccc--CCCcceeccCCCCCccccccCCCCCCc
Q 018764 30 PSFYNS--TCPNVANIIREVLQNAFLSDIRIGASLIRLHFH-----DCFVN--GCDASILLDSTNTIDSEKFAAPNNNSA 100 (350)
Q Consensus 30 ~~fY~~--sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FH-----Dcfv~--GcDgSill~~~~~~~~E~~~~~N~~~~ 100 (350)
.+||.. -|+.+++.++..+++.+ .+|+++|.+|||+|| ||+++ ||||||.. .+|+++++|.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHH
Confidence 456753 48899999999999988 689999999999999 88886 99999944 3699999998655
Q ss_pred chhHHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHH
Q 018764 101 RGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRN 180 (350)
Q Consensus 101 ~gf~~I~~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 180 (350)
+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.. +++||.|+.++++|++.|++
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHH
Confidence 8999999999987 589999999999999999999999999999999998864 46799999999999999997
Q ss_pred -cCCCCCccceeeccccccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHH
Q 018764 181 -VGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKY 259 (350)
Q Consensus 181 -~Gl~~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Y 259 (350)
+||+++ |||+|+||||||++|| .|+ +|.|. . ..||.+|||+|
T Consensus 148 ~~Gl~~~-d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------------~-~~tp~~fDn~Y 190 (250)
T PLN02364 148 QMGLSDK-DIVALSGAHTLGRCHK----DRS-GFEGA------------------------------W-TSNPLIFDNSY 190 (250)
T ss_pred hcCCCHH-HheeeecceeeccccC----CCC-CCCCC------------------------------C-CCCCCccchHH
Confidence 699999 9999999999999999 354 33221 1 16899999999
Q ss_pred HHHhhhc--Ccccc--cchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCC
Q 018764 260 FSNLRLR--KGLLQ--SDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPL 315 (350)
Q Consensus 260 y~nl~~~--~glL~--SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lgvl 315 (350)
|++|+.+ +|+|. |||+|+.|+ +|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 191 y~~ll~~~~~gll~l~sD~~L~~d~--~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 191 FKELLSGEKEGLLQLVSDKALLDDP--VFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHhcCCcCCCccccchHHHccCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 89865 999999999 999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.3e-62 Score=473.69 Aligned_cols=239 Identities=27% Similarity=0.377 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHhCcc---ccchhhhhhhccccc------------cCCCcceeccCCCCCccccccCCCCCCcchhH
Q 018764 40 VANIIREVLQNAFLSDIR---IGASLIRLHFHDCFV------------NGCDASILLDSTNTIDSEKFAAPNNNSARGFE 104 (350)
Q Consensus 40 ~e~iVr~~v~~~~~~~~~---~aa~lLRL~FHDcfv------------~GcDgSill~~~~~~~~E~~~~~N~~~~~gf~ 104 (350)
+|..|+++|++.+..+.. .|+.+|||+||||++ +|||||||++.+ .|+++++|. +++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 589999999999986554 566799999999996 799999999743 699999998 454 8
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhh-cCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCC
Q 018764 105 VIDNMKAAVEKACRRVVSCADILTIAAERSVAL-SGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGL 183 (350)
Q Consensus 105 ~I~~iK~~le~~cp~~VScADilalAardaV~~-~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 183 (350)
+|+.+|..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 59999999999999998864 46799999999999999999999
Q ss_pred CCCccceeeccccccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHh
Q 018764 184 NDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNL 263 (350)
Q Consensus 184 ~~~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl 263 (350)
+++ |||+|+||||||++|. .||+++ .+++| .||.+|||+||+|+
T Consensus 163 ~~~-E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~l 206 (328)
T cd00692 163 SPD-ELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIET 206 (328)
T ss_pred CHH-HHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHH
Confidence 999 9999999999999982 366653 13577 69999999999998
Q ss_pred h-hcCc-------------------ccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccc
Q 018764 264 R-LRKG-------------------LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIR 323 (350)
Q Consensus 264 ~-~~~g-------------------lL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lgvltg~~GeIR 323 (350)
+ .+++ +|+||++|+.|+ +|+.+|++||+||++|+++|++||+||++|||.. ..+
T Consensus 207 l~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~--~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~----~~l 280 (328)
T cd00692 207 LLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDP--RTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN----ISL 280 (328)
T ss_pred HHcCCCCCCccccccccccCccccccccchHHHhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc----chh
Confidence 7 4555 499999999999 9999999999999999999999999999999873 478
Q ss_pred cccccccCCC
Q 018764 324 LNCRRVNGNN 333 (350)
Q Consensus 324 ~~C~~vn~~~ 333 (350)
.+|+.|++..
T Consensus 281 ~dcs~v~p~~ 290 (328)
T cd00692 281 TDCSDVIPPP 290 (328)
T ss_pred ccCcccCCCC
Confidence 8999999653
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.3e-62 Score=458.92 Aligned_cols=221 Identities=28% Similarity=0.477 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHhCccccchhhhhhhccccc-------cCCCcceeccCCCCCccccccCCCCCCcchhHHHHHHHHHH
Q 018764 41 ANIIREVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAV 113 (350)
Q Consensus 41 e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~l 113 (350)
.+-++..+.+.+. +...+|.+|||+||||.+ +||||||.+. .|+++++|.++..++++|++||+++
T Consensus 17 ~~~~~~~~~~~~~-~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLIA-EKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHHh-CCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc
Confidence 3446777888774 579999999999999964 7999999763 6999999996555999999999987
Q ss_pred HHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCCCCCccceeec
Q 018764 114 EKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS 193 (350)
Q Consensus 114 e~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs 193 (350)
++|||||||+||+|+||+.+|||.|+|++||+|+.++.+ +++||.|+.++++|++.|+++||+++ ||||||
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~-dlVALs 160 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDK-DIVALS 160 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHH-HHeeee
Confidence 589999999999999999999999999999999998753 56899999999999999999999999 999999
Q ss_pred cccccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhc--Ccc--
Q 018764 194 GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLR--KGL-- 269 (350)
Q Consensus 194 GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~--~gl-- 269 (350)
||||||++||. | ++|.|. +| .||.+|||+||++|+.+ +|+
T Consensus 161 GaHTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~ 204 (251)
T PLN02879 161 GGHTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQ 204 (251)
T ss_pred ccccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCcc
Confidence 99999999995 4 344321 12 58999999999999999 898
Q ss_pred cccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCC
Q 018764 270 LQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPL 315 (350)
Q Consensus 270 L~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lgvl 315 (350)
|+||++|+.|| +|+++|++||.||++|+++|++||+||++||+.
T Consensus 205 L~SD~aL~~D~--~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 205 LPTDKALLDDP--LFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred chhhHHHhcCC--cHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 67999999999 999999999999999999999999999999974
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1e-58 Score=437.75 Aligned_cols=224 Identities=33% Similarity=0.517 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHhCccccchhhhhhhcccccc--------CCCcceeccCCCCCccccccCCCCCCcchhHHHHHHHHHHH
Q 018764 43 IIREVLQNAFLSDIRIGASLIRLHFHDCFVN--------GCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVE 114 (350)
Q Consensus 43 iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~--------GcDgSill~~~~~~~~E~~~~~N~~~~~gf~~I~~iK~~le 114 (350)
.|++.|++.+.+++++++++|||+|||||+. ||||||+++ +|+++++|.++.+++++|+.||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 999999997 39999999976799999999999999
Q ss_pred HhcCCCCcHHHHHHHhhhhHhhhc--CCCcccccCCccCCCchh--hhhhccCCCCCCCCHHHHHHHHHHcCCCCCccce
Q 018764 115 KACRRVVSCADILTIAAERSVALS--GGPSWAVPLGRRDSRTAN--RALANQNLPGPSNSLDELKSSFRNVGLNDKFDLV 190 (350)
Q Consensus 115 ~~cp~~VScADilalAardaV~~~--GGP~~~v~~GRrD~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlV 190 (350)
. |++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|+++||+++ |||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~-e~V 152 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPS-ELV 152 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHH-HHH
Confidence 8 899999999999999999999 999999999999999774 223456688888899999999999999999 999
Q ss_pred eec-ccccc-ccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhcC-
Q 018764 191 ALS-GAHTF-GRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRK- 267 (350)
Q Consensus 191 aLs-GaHTi-G~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~~- 267 (350)
||+ ||||| |++||..|..|+ | .+|..||.+|||+||++++.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~ 198 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNW 198 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCc
Confidence 999 99999 999998876664 2 2355799999999999999998
Q ss_pred ---------------cccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhc
Q 018764 268 ---------------GLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGN 311 (350)
Q Consensus 268 ---------------glL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~ 311 (350)
++|+||++|+.|+ +|+.+|++||.|+++|+++|++||+||++
T Consensus 199 ~~~~~~~~~~~~~~~~~l~sD~~L~~d~--~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 199 EWRVGSPDPDGVKGPGLLPSDYALLSDS--ETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccccCCccCCCcccCCCchhhHHHhcCH--hHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 8999999999999 99999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=3e-55 Score=431.72 Aligned_cols=259 Identities=20% Similarity=0.329 Sum_probs=228.4
Q ss_pred HHHHHHHHHHHHhC--------ccccchhhhhhhccccc-------cCCC-cceeccCCCCCccccccCCCCCCcchhHH
Q 018764 42 NIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGCD-ASILLDSTNTIDSEKFAAPNNNSARGFEV 105 (350)
Q Consensus 42 ~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~N~~~~~gf~~ 105 (350)
+.|++.|.+++... ...+|.+|||+|||+.+ +|++ |+|.+. +|++++.|.++.++..+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHHH
Confidence 67999999999864 37999999999999986 6886 788765 69999999988789999
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhh---------------------------
Q 018764 106 IDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA--------------------------- 158 (350)
Q Consensus 106 I~~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~--------------------------- 158 (350)
++.||+++ |..||+||+|+||+..||+.+|||.|++.+||.|...+...
T Consensus 119 L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 99999987 45799999999999999999999999999999999754320
Q ss_pred ----------hhccCCCCCCCCHHHHHHHHHHcCCCCCccceee-ccccccccccccccccccccCCCCCCCCCCccHHH
Q 018764 159 ----------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL-SGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTL 227 (350)
Q Consensus 159 ----------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaL-sGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~ 227 (350)
+-+..||+|..++.+|++.|++|||+++ ||||| +||||||++||..|.+||. +||.+++.|
T Consensus 195 ~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~-E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~ 266 (409)
T cd00649 195 VQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIE 266 (409)
T ss_pred hhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHH-HHeeeccCCcceeecCcccccccCC-------CCCCcCHHH
Confidence 1122699999999999999999999999 99999 5999999999999999982 699999999
Q ss_pred HHHHh--hcCCCCCC-CCcccccC---CCCCCCcChHHHHHhhh------------------------------------
Q 018764 228 LKQLR--ELCPQGGN-GAVLANFD---VKTPDAFDNKYFSNLRL------------------------------------ 265 (350)
Q Consensus 228 ~~~L~--~~Cp~~~~-~~~~~~lD---~~tp~~FDn~Yy~nl~~------------------------------------ 265 (350)
+..|+ ..||.+.+ +...+.+| +.||.+|||+||++|+.
T Consensus 267 ~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~ 346 (409)
T cd00649 267 QQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKH 346 (409)
T ss_pred HHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCcccccccc
Confidence 99996 89997543 33455788 57999999999999998
Q ss_pred cCcccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 018764 266 RKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRM--GNLKPLTGNQG 320 (350)
Q Consensus 266 ~~glL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM--~~lgvltg~~G 320 (350)
++|||+||++|+.|| +|+++|++||.|+++||++|++||+|| +.+||++.--|
T Consensus 347 ~~gmL~SD~aL~~Dp--~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 347 APMMLTTDLALRFDP--EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred CcccchhhHhhhcCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999 999999999999999999999999999 69999885444
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.4e-52 Score=436.11 Aligned_cols=255 Identities=21% Similarity=0.306 Sum_probs=222.9
Q ss_pred HHHHHHHHHHHHhC--------ccccchhhhhhhccccc-------cCC-CcceeccCCCCCccccccCCCCCCcchhHH
Q 018764 42 NIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGC-DASILLDSTNTIDSEKFAAPNNNSARGFEV 105 (350)
Q Consensus 42 ~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~Gc-DgSill~~~~~~~~E~~~~~N~~~~~gf~~ 105 (350)
+.|+++|.+++... ...+|.+|||+||++.+ +|| .|+|.+. +|++++.|.++.+++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 56999999999864 36899999999999987 687 5888664 69999999987788999
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhh--------------------------h-
Q 018764 106 IDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR--------------------------A- 158 (350)
Q Consensus 106 I~~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~--------------------------~- 158 (350)
++.||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.. .
T Consensus 129 L~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 999988 589999999999999999999999999999999999943210 0
Q ss_pred ---------hhccCCCCCCCCHHHHHHHHHHcCCCCCccceeec-cccccccccccccccccccCCCCCCCCCCccHHHH
Q 018764 159 ---------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS-GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLL 228 (350)
Q Consensus 159 ---------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~ 228 (350)
+....+|.|..++.+|++.|++||||++ |||||+ ||||||++||.+|.+|| .+||++++.|+
T Consensus 205 ~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~-EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~~ 276 (716)
T TIGR00198 205 EMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDE-ETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIEE 276 (716)
T ss_pred hccccccCcccccCCCCCCCCHHHHHHHHHHcCCChH-HHeeeecCceeccccCCCcccccC-------CCCCCcCHHHH
Confidence 1122699999999999999999999999 999995 99999999999999998 27999999999
Q ss_pred HHHhhcCCCCC--C-CCcccccC---CCCCCCcChHHHHHhhhc----------------------------------Cc
Q 018764 229 KQLRELCPQGG--N-GAVLANFD---VKTPDAFDNKYFSNLRLR----------------------------------KG 268 (350)
Q Consensus 229 ~~L~~~Cp~~~--~-~~~~~~lD---~~tp~~FDn~Yy~nl~~~----------------------------------~g 268 (350)
+.|+..||.+. + +...+.+| +.||.+|||+||+||+.+ ++
T Consensus 277 ~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~ 356 (716)
T TIGR00198 277 QGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPI 356 (716)
T ss_pred HHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccC
Confidence 99999998532 2 23356677 679999999999999974 68
Q ss_pred ccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhh--cCCCCC
Q 018764 269 LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMG--NLKPLT 316 (350)
Q Consensus 269 lL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~--~lgvlt 316 (350)
+|+||++|..|| +|+++|++||.|++.|+++|++||+||+ .+|++.
T Consensus 357 mL~SDlaL~~Dp--~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 357 MLDADLALRFDP--EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred ccchhHHhccCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 999999999999 9999999999999999999999999999 566654
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=5.5e-49 Score=407.20 Aligned_cols=256 Identities=20% Similarity=0.324 Sum_probs=223.4
Q ss_pred HHHHHHHHHHHHhC--------ccccchhhhhhhccccc-------cCCC-cceeccCCCCCccccccCCCCCCcchhHH
Q 018764 42 NIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGCD-ASILLDSTNTIDSEKFAAPNNNSARGFEV 105 (350)
Q Consensus 42 ~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~N~~~~~gf~~ 105 (350)
+.|+++|.+.+... ...+|.+|||+||++.+ +||+ |+|.+. +|++++.|.++.++..+
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~ka~~~ 130 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLDKARRL 130 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHHHHHHH
Confidence 57999999999864 36899999999999986 6885 788664 79999999988889999
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhh---------------------------
Q 018764 106 IDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA--------------------------- 158 (350)
Q Consensus 106 I~~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~--------------------------- 158 (350)
++.||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 131 L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~ 206 (726)
T PRK15061 131 LWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLA 206 (726)
T ss_pred HHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchh
Confidence 99999987 45799999999999999999999999999999998654321
Q ss_pred -----------hhccCCCCCCCCHHHHHHHHHHcCCCCCccceeec-cccccccccccccccccccCCCCCCCCCCccHH
Q 018764 159 -----------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS-GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRT 226 (350)
Q Consensus 159 -----------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~ 226 (350)
+-+..+|+|..++.+|++.|++|||+++ |||||+ ||||||++||..|.+|| .+||.+++.
T Consensus 207 a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDe-EtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~~ 278 (726)
T PRK15061 207 AVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAPI 278 (726)
T ss_pred hhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHH-HheeeccCCceeeeCCCcCccccc-------CCCCCcCHH
Confidence 0012379999999999999999999999 999995 99999999999999997 279999999
Q ss_pred HHHHHh--hcCCCCCC-CCcccccC---CCCCCCcChHHHHHhhhc----------------------------------
Q 018764 227 LLKQLR--ELCPQGGN-GAVLANFD---VKTPDAFDNKYFSNLRLR---------------------------------- 266 (350)
Q Consensus 227 ~~~~L~--~~Cp~~~~-~~~~~~lD---~~tp~~FDn~Yy~nl~~~---------------------------------- 266 (350)
+++.|. +.||.+.+ +.....+| ..||.+|||+||++|+.+
T Consensus 279 ~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~ 358 (726)
T PRK15061 279 EEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKK 358 (726)
T ss_pred HHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccc
Confidence 999985 89997533 33455677 679999999999999984
Q ss_pred --CcccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhc--CCCCCC
Q 018764 267 --KGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGN--LKPLTG 317 (350)
Q Consensus 267 --~glL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~--lgvltg 317 (350)
.++|+||++|..|| +|+++|++||.|+++|+++|++||+||.+ +|+++.
T Consensus 359 ~~~~MLtSD~AL~~DP--~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~r 411 (726)
T PRK15061 359 HAPTMLTTDLALRFDP--EYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSR 411 (726)
T ss_pred cCcccccccHHhhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhh
Confidence 58999999999999 99999999999999999999999999954 777653
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.6e-49 Score=373.01 Aligned_cols=219 Identities=26% Similarity=0.348 Sum_probs=178.4
Q ss_pred HHHHHHHHHHhCccccchhhhhhhcccc-------ccCCCcceeccCCCCCccccc-cCCCCCCcchhHHHHHHHHHHHH
Q 018764 44 IREVLQNAFLSDIRIGASLIRLHFHDCF-------VNGCDASILLDSTNTIDSEKF-AAPNNNSARGFEVIDNMKAAVEK 115 (350)
Q Consensus 44 Vr~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSill~~~~~~~~E~~-~~~N~~~~~gf~~I~~iK~~le~ 115 (350)
|..--......++++++.+|||+||||| ++||||||+++.. .+|+. .+.|. .+++|+.|+.+
T Consensus 27 v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~------ 96 (264)
T cd08201 27 VTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP------ 96 (264)
T ss_pred cccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC------
Confidence 3333334455789999999999999999 8999999999742 46776 44454 67888877543
Q ss_pred hcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhhhhccCCCCCCCCHHHHHHHHHHcCCCCCccceeecc-
Q 018764 116 ACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSG- 194 (350)
Q Consensus 116 ~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsG- 194 (350)
+||||||||||+|+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+++||+++ |||+|||
T Consensus 97 ----~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~-DmVaLsgg 167 (264)
T cd08201 97 ----RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTS-EMIALVAC 167 (264)
T ss_pred ----ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChH-HHheeecC
Confidence 699999999999999999999999999999999988752 499999999999999999999999 9999996
Q ss_pred ccccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcChHHHHHhhhcCc------
Q 018764 195 AHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKG------ 268 (350)
Q Consensus 195 aHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~nl~~~~g------ 268 (350)
|||||++||..|.+++- |. ...+...++| .||.+|||+||.+++.+..
T Consensus 168 aHTiG~ahc~~f~~~~~---------~g----------------~~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~ 221 (264)
T cd08201 168 GHTLGGVHSEDFPEIVP---------PG----------------SVPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVV 221 (264)
T ss_pred CeeeeecccccchhhcC---------Cc----------------cccCCCCCCC-CCccccchHHHHHHhcCCCCCceee
Confidence 99999999998876531 10 0001233566 6999999999999998642
Q ss_pred ----ccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhc
Q 018764 269 ----LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGN 311 (350)
Q Consensus 269 ----lL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~ 311 (350)
.+.||..+++..+|.|. +.+| +++.|.+.++..+.||.+
T Consensus 222 ~~~~~~~sd~r~f~~d~n~t~---~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 222 GPNNTTNSDLRIFSSDGNVTM---NELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred cCCCCccchhhheecCccHHH---HHhc-ChHHHHHHHHHHHHHHhC
Confidence 46899999987755664 5566 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.4e-37 Score=295.65 Aligned_cols=221 Identities=19% Similarity=0.234 Sum_probs=178.5
Q ss_pred HHHHHHHHhCccccchhhhhhhccccc-------cCCCcc-eeccCCCCCccccccCCCCC--CcchhHHHHHHHHHHHH
Q 018764 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDSTNTIDSEKFAAPNNN--SARGFEVIDNMKAAVEK 115 (350)
Q Consensus 46 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~~~gf~~I~~iK~~le~ 115 (350)
+.+++.+....-+++.+|||+||++.+ +|++|+ |.|. +|++++.|.+ +.+.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 446677777778899999999999986 699999 6554 7999999997 66789999999998842
Q ss_pred hc-CC-CCcHHHHHHHhhhhHhhhcCC-----CcccccCCccCCCchhhhhh--ccCCCCCC------------CCHHHH
Q 018764 116 AC-RR-VVSCADILTIAAERSVALSGG-----PSWAVPLGRRDSRTANRALA--NQNLPGPS------------NSLDEL 174 (350)
Q Consensus 116 ~c-p~-~VScADilalAardaV~~~GG-----P~~~v~~GRrD~~~s~~~~~--~~~lP~p~------------~~~~~l 174 (350)
.- ++ .||+||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 21 22 699999999999999999999 99999999999987643211 11345332 234789
Q ss_pred HHHHHHcCCCCCccceeecccc-ccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCC
Q 018764 175 KSSFRNVGLNDKFDLVALSGAH-TFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPD 253 (350)
Q Consensus 175 ~~~F~~~Gl~~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~ 253 (350)
++.|.++||+++ |||||+||| ++|+.|..+ +.|. +..+|.
T Consensus 171 rd~f~rlglsd~-EmvaL~Gg~r~lG~~~~~s-------~~G~-------------------------------wT~~p~ 211 (297)
T cd08200 171 VDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHGV-------------------------------FTDRPG 211 (297)
T ss_pred HHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCCC-------------------------------CcCCCC
Confidence 999999999999 999999997 699877422 1121 225899
Q ss_pred CcChHHHHHhhhc--------------------Cc-----ccccchhhcCCCccchHHHHHHhhhC--hHHHHHHHHHHH
Q 018764 254 AFDNKYFSNLRLR--------------------KG-----LLQSDQELFSTPGADTAAIVEDFGRN--QTAFFKNFVISM 306 (350)
Q Consensus 254 ~FDn~Yy~nl~~~--------------------~g-----lL~SD~~L~~d~~~~T~~~V~~yA~d--~~~F~~~Fa~Am 306 (350)
+|||.||+||+.. .| .+.+|.+|.+|+ +.|++|+.||.| ++.||+||++||
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~--~~R~~ve~YA~dd~~~~F~~DF~~A~ 289 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRAVAEVYASDDAQEKFVKDFVAAW 289 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCH--HHHHHHHHHhcccchhHHHHHHHHHH
Confidence 9999999999952 01 267899999999 999999999998 999999999999
Q ss_pred HHhhcCC
Q 018764 307 IRMGNLK 313 (350)
Q Consensus 307 ~KM~~lg 313 (350)
.||+++.
T Consensus 290 ~Klmeld 296 (297)
T cd08200 290 TKVMNLD 296 (297)
T ss_pred HHHHhcC
Confidence 9999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=99.98 E-value=1.4e-32 Score=286.70 Aligned_cols=221 Identities=19% Similarity=0.233 Sum_probs=176.0
Q ss_pred HHHHHHHHH---HHhCccccchhhhhhhccccc-------cCCCcc-eeccCCCCCccccccCCC--CCCcchhHHHHHH
Q 018764 43 IIREVLQNA---FLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDSTNTIDSEKFAAPN--NNSARGFEVIDNM 109 (350)
Q Consensus 43 iVr~~v~~~---~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N--~~~~~gf~~I~~i 109 (350)
+|+++|.++ +....-..+.|||++||++.+ +|++|+ |.|. +|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 446666654 445566789999999999986 799998 7664 69999999 6667788999999
Q ss_pred HHHHHHhcCCCCcHHHHHHHhhhhHhhhc---CCC--cccccCCccCCCchhhhhhccCCC---C------------CCC
Q 018764 110 KAAVEKACRRVVSCADILTIAAERSVALS---GGP--SWAVPLGRRDSRTANRALANQNLP---G------------PSN 169 (350)
Q Consensus 110 K~~le~~cp~~VScADilalAardaV~~~---GGP--~~~v~~GRrD~~~s~~~~~~~~lP---~------------p~~ 169 (350)
|+++.. ..||.||+|+||+..|||.+ ||| .+++.+||.|....... ++...| . ...
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCC
Confidence 998742 27999999999999999999 898 68999999999876431 222222 1 122
Q ss_pred CHHHHHHHHHHcCCCCCccceeeccc-cccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccC
Q 018764 170 SLDELKSSFRNVGLNDKFDLVALSGA-HTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFD 248 (350)
Q Consensus 170 ~~~~l~~~F~~~Gl~~~~dlVaLsGa-HTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD 248 (350)
....|++.|..+||+++ |||||+|| |++|+.|..+ +.|. .
T Consensus 579 ~~~~l~d~a~~lglt~~-EmvaL~Gg~r~lG~~~~~s-------~~G~-------------------------------~ 619 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAP-EMTVLIGGMRVLGANHGGS-------KHGV-------------------------------F 619 (716)
T ss_pred HHHHHHHHHHhCCCChH-HHHheecchhhccccCCCC-------CCCC-------------------------------C
Confidence 45678999999999999 99999998 5999988532 1111 1
Q ss_pred CCCCCCcChHHHHHhhhcC--------------------c---cc--ccchhhcCCCccchHHHHHHhhhCh--HHHHHH
Q 018764 249 VKTPDAFDNKYFSNLRLRK--------------------G---LL--QSDQELFSTPGADTAAIVEDFGRNQ--TAFFKN 301 (350)
Q Consensus 249 ~~tp~~FDn~Yy~nl~~~~--------------------g---lL--~SD~~L~~d~~~~T~~~V~~yA~d~--~~F~~~ 301 (350)
..+|.+|||.||+||+... | ++ .+|..|.+|+ +.|++|+.||.|+ +.|++|
T Consensus 620 T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~--~lra~aE~YA~dd~~~~F~~D 697 (716)
T TIGR00198 620 TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNS--ILRAVAEVYAQDDAREKFVKD 697 (716)
T ss_pred cCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCH--HHHHHHHHHhcccccchHHHH
Confidence 2579999999999998621 2 22 6799999999 9999999999997 899999
Q ss_pred HHHHHHHhhcCCC
Q 018764 302 FVISMIRMGNLKP 314 (350)
Q Consensus 302 Fa~Am~KM~~lgv 314 (350)
|++||.|+++++-
T Consensus 698 F~~Aw~Klm~ldr 710 (716)
T TIGR00198 698 FVAAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=99.98 E-value=5.8e-32 Score=280.79 Aligned_cols=220 Identities=19% Similarity=0.260 Sum_probs=178.8
Q ss_pred HHHHHHHHhCccccchhhhhhhccccc-------cCCCcc-eeccCCCCCccccccCCCC--CCcchhHHHHHHHHHHHH
Q 018764 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDSTNTIDSEKFAAPNN--NSARGFEVIDNMKAAVEK 115 (350)
Q Consensus 46 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~--~~~~gf~~I~~iK~~le~ 115 (350)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. ++.+.+.+++.||+++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 456666776777889999999999986 799998 7665 699999998 666789999999999965
Q ss_pred hcC--CCCcHHHHHHHhhhhHhhhc---CC--CcccccCCccCCCchhhhhhc---cCCCCCC------------CCHHH
Q 018764 116 ACR--RVVSCADILTIAAERSVALS---GG--PSWAVPLGRRDSRTANRALAN---QNLPGPS------------NSLDE 173 (350)
Q Consensus 116 ~cp--~~VScADilalAardaV~~~---GG--P~~~v~~GRrD~~~s~~~~~~---~~lP~p~------------~~~~~ 173 (350)
.-. ..||.||+|+||+..|||.+ || |.|++.+||.|.+..... ++ ..+|.++ .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHHH
Confidence 432 26999999999999999998 68 999999999999875432 22 2456543 13478
Q ss_pred HHHHHHHcCCCCCccceeecccc-ccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCC
Q 018764 174 LKSSFRNVGLNDKFDLVALSGAH-TFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTP 252 (350)
Q Consensus 174 l~~~F~~~Gl~~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp 252 (350)
|++.|.++||+++ |||||+||| ++|..|-.+ +.|. ...+|
T Consensus 595 L~d~a~~lglt~~-EmvaL~Gg~r~Lg~~~~~S-------~~G~-------------------------------~T~~p 635 (726)
T PRK15061 595 LVDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHGV-------------------------------FTDRP 635 (726)
T ss_pred HHHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCCC-------------------------------CcCCC
Confidence 9999999999999 999999997 788877321 1111 12579
Q ss_pred CCcChHHHHHhhhcC--------------------c---c--cccchhhcCCCccchHHHHHHhhhC--hHHHHHHHHHH
Q 018764 253 DAFDNKYFSNLRLRK--------------------G---L--LQSDQELFSTPGADTAAIVEDFGRN--QTAFFKNFVIS 305 (350)
Q Consensus 253 ~~FDn~Yy~nl~~~~--------------------g---l--L~SD~~L~~d~~~~T~~~V~~yA~d--~~~F~~~Fa~A 305 (350)
.+|||.||+||+... | + +.+|..|.+|+ +.|++|+.||.| ++.|++||++|
T Consensus 636 ~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds--~lRa~aEvYA~dd~~~kF~~DF~~A 713 (726)
T PRK15061 636 GVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNS--QLRALAEVYASDDAKEKFVRDFVAA 713 (726)
T ss_pred CccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCH--HHHHHHHHHhcccchhHHHHHHHHH
Confidence 999999999999521 1 1 47899999999 999999999999 99999999999
Q ss_pred HHHhhcCC
Q 018764 306 MIRMGNLK 313 (350)
Q Consensus 306 m~KM~~lg 313 (350)
|.|+++++
T Consensus 714 w~Kvmeld 721 (726)
T PRK15061 714 WTKVMNLD 721 (726)
T ss_pred HHHHHhCC
Confidence 99999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.4e-28 Score=243.76 Aligned_cols=252 Identities=19% Similarity=0.299 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHhCc--------cccchhhhhhhccccc-------cCCCcceeccCCCCCccccccCCCCCCcchhHHHH
Q 018764 43 IIREVLQNAFLSDI--------RIGASLIRLHFHDCFV-------NGCDASILLDSTNTIDSEKFAAPNNNSARGFEVID 107 (350)
Q Consensus 43 iVr~~v~~~~~~~~--------~~aa~lLRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~~~~gf~~I~ 107 (350)
.|+..+..++.... ..+|.+|||+||-+.+ +|..+. .-++.++.++|.|.++.+++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHhh
Confidence 45666666665542 4789999999999986 233221 123567899999998889999999
Q ss_pred HHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCcccccCCccCCCchhhh-----------------------------
Q 018764 108 NMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA----------------------------- 158 (350)
Q Consensus 108 ~iK~~le~~cp~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~----------------------------- 158 (350)
.||+++ +..+|+||+++|++..|++.+|++++.+..||.|-..+...
T Consensus 146 PIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 999987 67999999999999999999999999999999998766540
Q ss_pred --------hhccCCCCCCCCHHHHHHHHHHcCCCCCccceeecc-ccccccccccccccccccCCCCCCCCCCccHHHHH
Q 018764 159 --------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSG-AHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLK 229 (350)
Q Consensus 159 --------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsG-aHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~ 229 (350)
+-+...|+|..+..+++..|++|+|+++ |.|||++ |||+|++|-..-...+ .++|.-.+--.+
T Consensus 222 MGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDe-ETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~q 293 (730)
T COG0376 222 MGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQ 293 (730)
T ss_pred eeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcH-hhhhhhhcccccccccCCCchhhc-------CCCccccchhhh
Confidence 1134578999999999999999999999 9999994 9999999976422111 256655554444
Q ss_pred HHh--hcCCCCCCC-Ccc---cccCCCCCCCcChHHHHHhhhc-----------------------------------Cc
Q 018764 230 QLR--ELCPQGGNG-AVL---ANFDVKTPDAFDNKYFSNLRLR-----------------------------------KG 268 (350)
Q Consensus 230 ~L~--~~Cp~~~~~-~~~---~~lD~~tp~~FDn~Yy~nl~~~-----------------------------------~g 268 (350)
.|- ..|-.+.+. ... -..+..||++|||+||.+|... ..
T Consensus 294 GlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~ 373 (730)
T COG0376 294 GLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPM 373 (730)
T ss_pred ccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCce
Confidence 444 233333222 112 2345679999999999999862 14
Q ss_pred ccccchhhcCCCccchHHHHHHhhhChHHHHHHHHHHHHHhhcCC
Q 018764 269 LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLK 313 (350)
Q Consensus 269 lL~SD~~L~~d~~~~T~~~V~~yA~d~~~F~~~Fa~Am~KM~~lg 313 (350)
+|++|.+|--|| ..+.|.++|..|++.|.+.|++||.||.+-+
T Consensus 374 MlttDlaLr~DP--~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 374 MLTTDLALRFDP--EYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred eeccchhhhcCh--HHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 799999999999 9999999999999999999999999998754
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.24 E-value=5.6e-11 Score=120.16 Aligned_cols=216 Identities=19% Similarity=0.286 Sum_probs=149.5
Q ss_pred HHHHHHHhCccccchhhhhhhccccc-------cCCCccee-ccCCCCCccccccCCCCC--CcchhHHHHHHHHHHHHh
Q 018764 47 VLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDASIL-LDSTNTIDSEKFAAPNNN--SARGFEVIDNMKAAVEKA 116 (350)
Q Consensus 47 ~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgSil-l~~~~~~~~E~~~~~N~~--~~~gf~~I~~iK~~le~~ 116 (350)
.+++.+....-....++-.+|-.+-+ +|.+|.-+ | .+.++++.|.. +.+-+.+++.|.+.+.
T Consensus 453 ~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirL------aPqkdWevN~P~~l~kvl~~le~iq~~fn-- 524 (730)
T COG0376 453 ALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRL------APQKDWEVNQPAELAKVLAVLEKIQKEFN-- 524 (730)
T ss_pred HHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEee------cccccCCCCCHHHHHHHHHHHHHHHHHhc--
Confidence 35566666666677788888887754 46666533 4 36789999963 2356788888888775
Q ss_pred cCCCCcHHHHHHHhhhhHhhhc---CCC--cccccCCccCCCchhhhhhccC-C-CC------------CCCCHHHHHHH
Q 018764 117 CRRVVSCADILTIAAERSVALS---GGP--SWAVPLGRRDSRTANRALANQN-L-PG------------PSNSLDELKSS 177 (350)
Q Consensus 117 cp~~VScADilalAardaV~~~---GGP--~~~v~~GRrD~~~s~~~~~~~~-l-P~------------p~~~~~~l~~~ 177 (350)
..||.||+|+|++..+|+.+ +|- .+|+..||.|.+.......... | |- ....-.-|++.
T Consensus 525 --kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDk 602 (730)
T COG0376 525 --KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDK 602 (730)
T ss_pred --CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHH
Confidence 47999999999999999875 665 4577899999977653211111 1 11 11123457778
Q ss_pred HHHcCCCCCccceeecccc-ccccccccccccccccCCCCCCCCCCccHHHHHHHhhcCCCCCCCCcccccCCCCCCCcC
Q 018764 178 FRNVGLNDKFDLVALSGAH-TFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFD 256 (350)
Q Consensus 178 F~~~Gl~~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FD 256 (350)
=+-.+|+.. ||++|.||- -+|. ||.|+ ...|.-| .|..+.
T Consensus 603 AqlL~Ltap-emtVLiGGlRvLg~-----------n~g~s-------------------------~~GVfT~--~pg~Lt 643 (730)
T COG0376 603 AQLLTLTAP-EMTVLIGGLRVLGA-----------NYGGS-------------------------KHGVFTD--RPGVLT 643 (730)
T ss_pred HHHhccCCc-cceEEEcceEeecc-----------CCCCC-------------------------ccceecc--Cccccc
Confidence 888999999 999999974 2222 12111 1122222 577778
Q ss_pred hHHHHHhhhc----------C----------cc-----cccchhhcCCCccchHHHHHHhhhC--hHHHHHHHHHHHHHh
Q 018764 257 NKYFSNLRLR----------K----------GL-----LQSDQELFSTPGADTAAIVEDFGRN--QTAFFKNFVISMIRM 309 (350)
Q Consensus 257 n~Yy~nl~~~----------~----------gl-----L~SD~~L~~d~~~~T~~~V~~yA~d--~~~F~~~Fa~Am~KM 309 (350)
|.||.||+.. + |- -..|..+-+++ ..|.+.+-||.| ++.|.+||+.||.|.
T Consensus 644 ndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns--~LRA~aEVYa~dda~ekFv~DFvaaw~kV 721 (730)
T COG0376 644 NDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRALAEVYASDDAKEKFVKDFVAAWTKV 721 (730)
T ss_pred chhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcH--HHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 8888888752 1 21 13577777777 999999999985 789999999999999
Q ss_pred hcCC
Q 018764 310 GNLK 313 (350)
Q Consensus 310 ~~lg 313 (350)
.++.
T Consensus 722 Mn~D 725 (730)
T COG0376 722 MNLD 725 (730)
T ss_pred hccc
Confidence 9875
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=76.50 E-value=1.5 Score=35.73 Aligned_cols=18 Identities=50% Similarity=0.656 Sum_probs=11.4
Q ss_pred CcchHHHHHHHHHHHHHh
Q 018764 1 MASLRFLLAAALVVAFVL 18 (350)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (350)
|||..++|+++++++++|
T Consensus 1 MaSK~~llL~l~LA~lLl 18 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLL 18 (95)
T ss_pred CchhHHHHHHHHHHHHHH
Confidence 897776666665555444
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=48.86 E-value=15 Score=29.08 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCccccccccccCC
Q 018764 297 AFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGN 332 (350)
Q Consensus 297 ~F~~~Fa~Am~KM~~lgvltg~~GeIR~~C~~vn~~ 332 (350)
....+|..||.||+.||.-. .---+|+.|-+.
T Consensus 2 ~m~~~F~~am~KlavLG~d~----~~LiDCSdVIP~ 33 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHDR----SDLIDCSDVIPV 33 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-G----GGSEE-GGGS--
T ss_pred hHHHHHHHHHHHHHHhcCCh----hhcccchhhccC
Confidence 35678999999999998643 224589888733
No 21
>PTZ00411 transaldolase-like protein; Provisional
Probab=44.17 E-value=84 Score=31.37 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=30.0
Q ss_pred cCCCcccccCCccCCCchhhhhhccCCCCC---CCCHHHHHHHHHHcCCCCC
Q 018764 138 SGGPSWAVPLGRRDSRTANRALANQNLPGP---SNSLDELKSSFRNVGLNDK 186 (350)
Q Consensus 138 ~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl~~~ 186 (350)
+|-.++..++||-+...-.........+.. -..+.++.+.|++.|+..+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~ 231 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTI 231 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeE
Confidence 477888999999865432211111111211 2357788889999998765
No 22
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=28.97 E-value=1.2e+02 Score=30.86 Aligned_cols=65 Identities=15% Similarity=0.279 Sum_probs=37.8
Q ss_pred CcHHHHHHHhhhhHh--hhcCCCcccccCCccCCCchhhhhhccCCCCCC----CCHHHHHHHHHHcCCCCC
Q 018764 121 VSCADILTIAAERSV--ALSGGPSWAVPLGRRDSRTANRALANQNLPGPS----NSLDELKSSFRNVGLNDK 186 (350)
Q Consensus 121 VScADilalAardaV--~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Gl~~~ 186 (350)
|.|-=-+.+....|+ ..+|-.++..++||-|...-.... ...+|... ..+.++.+.|++.|+..+
T Consensus 155 I~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g-~~~~~~~~dpGv~~v~~i~~~~~~~~~~T~ 225 (391)
T PRK12309 155 IHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETG-RDSYPGAEDPGVQSVTQIYNYYKKFGYKTE 225 (391)
T ss_pred CceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccC-CCccccccchHHHHHHHHHHHHHhcCCCcE
Confidence 444433444443333 235888899999998774332111 11244322 247888889999998766
No 23
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=20.68 E-value=58 Score=28.31 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHcCCCCCccc-eeecccccccccc
Q 018764 169 NSLDELKSSFRNVGLNDKFDL-VALSGAHTFGRAQ 202 (350)
Q Consensus 169 ~~~~~l~~~F~~~Gl~~~~dl-VaLsGaHTiG~~h 202 (350)
+++.+.+-.|+++||++. ++ |.|--+|-||+++
T Consensus 31 ddvkeqI~K~akKGltps-qIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPS-QIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChh-HceeeeecccCcchhh
Confidence 456677778999999998 86 5555799999886
Done!