Query 018767
Match_columns 350
No_of_seqs 477 out of 1275
Neff 12.0
Searched_HMMs 46136
Date Fri Mar 29 03:52:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018767.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018767hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 3.1E-43 6.8E-48 291.3 29.2 347 1-349 114-471 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 1E-36 2.2E-41 264.9 25.0 331 3-346 115-502 (502)
3 KOG0254 Predicted transporter 100.0 1.9E-35 4.2E-40 256.8 31.7 349 1-349 140-500 (513)
4 PRK10077 xylE D-xylose transpo 100.0 2.6E-34 5.6E-39 249.8 29.3 333 4-349 121-474 (479)
5 TIGR01299 synapt_SV2 synaptic 100.0 6.1E-35 1.3E-39 257.5 23.4 325 1-339 253-740 (742)
6 PF00083 Sugar_tr: Sugar (and 100.0 1E-40 2.2E-45 287.5 -14.7 341 2-347 101-451 (451)
7 TIGR00898 2A0119 cation transp 100.0 6.1E-33 1.3E-37 242.5 22.5 325 1-342 178-504 (505)
8 TIGR00879 SP MFS transporter, 100.0 2.7E-31 5.8E-36 231.4 29.6 338 3-341 127-479 (481)
9 KOG0253 Synaptic vesicle trans 100.0 1.8E-31 3.9E-36 207.5 21.3 324 1-340 164-527 (528)
10 PRK10642 proline/glycine betai 100.0 1.7E-31 3.6E-36 231.5 21.5 299 5-338 120-435 (490)
11 PRK09952 shikimate transporter 100.0 3.7E-28 8E-33 207.7 23.0 290 5-335 127-435 (438)
12 PRK10406 alpha-ketoglutarate t 100.0 1.5E-27 3.3E-32 203.9 21.6 282 5-332 126-423 (432)
13 KOG0255 Synaptic vesicle trans 100.0 8.2E-27 1.8E-31 204.2 25.7 332 1-347 169-507 (521)
14 COG2814 AraJ Arabinose efflux 100.0 5E-27 1.1E-31 189.5 19.1 276 1-328 99-381 (394)
15 PRK12307 putative sialic acid 100.0 4.8E-27 1E-31 201.2 19.9 274 2-310 105-385 (426)
16 COG2271 UhpC Sugar phosphate p 100.0 7E-28 1.5E-32 192.0 10.6 301 2-333 116-435 (448)
17 KOG0252 Inorganic phosphate tr 99.9 3.8E-28 8.3E-33 194.6 7.8 330 4-348 145-513 (538)
18 PRK15075 citrate-proton sympor 99.9 6E-26 1.3E-30 194.3 21.7 262 5-310 119-396 (434)
19 PRK10489 enterobactin exporter 99.9 1.9E-26 4.2E-31 196.7 18.5 300 2-349 109-416 (417)
20 PRK11551 putative 3-hydroxyphe 99.9 1.3E-26 2.8E-31 197.3 17.4 264 1-309 101-371 (406)
21 PRK11663 regulatory protein Uh 99.9 1.1E-26 2.5E-31 198.5 16.9 304 1-337 109-429 (434)
22 TIGR00903 2A0129 major facilit 99.9 1.3E-26 2.8E-31 192.6 16.4 275 2-328 78-361 (368)
23 TIGR00891 2A0112 putative sial 99.9 4.5E-25 9.8E-30 188.1 23.3 285 1-310 98-392 (405)
24 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4E-26 8.7E-31 193.6 16.5 284 1-309 94-396 (412)
25 PRK09556 uhpT sugar phosphate 99.9 1.6E-26 3.4E-31 199.6 14.0 279 1-307 120-411 (467)
26 PRK03545 putative arabinose tr 99.9 2E-25 4.3E-30 188.7 20.3 274 1-329 95-377 (390)
27 PRK11273 glpT sn-glycerol-3-ph 99.9 8.2E-25 1.8E-29 188.1 22.3 295 2-329 119-432 (452)
28 TIGR00893 2A0114 d-galactonate 99.9 7.6E-25 1.6E-29 186.3 19.9 301 2-325 81-392 (399)
29 TIGR00895 2A0115 benzoate tran 99.9 7.1E-25 1.5E-29 186.5 18.5 288 1-305 103-397 (398)
30 TIGR00883 2A0106 metabolite-pr 99.9 2.1E-24 4.5E-29 183.4 21.3 273 5-319 98-387 (394)
31 TIGR00894 2A0114euk Na(+)-depe 99.9 1E-24 2.3E-29 188.6 19.6 300 2-330 130-448 (465)
32 PRK09705 cynX putative cyanate 99.9 1.9E-24 4.1E-29 182.5 19.7 284 1-340 95-389 (393)
33 PRK05122 major facilitator sup 99.9 1E-24 2.2E-29 185.3 18.1 278 3-338 112-394 (399)
34 PRK12382 putative transporter; 99.9 3.4E-24 7.4E-29 181.5 19.8 270 2-328 111-385 (392)
35 TIGR00712 glpT glycerol-3-phos 99.9 1.6E-24 3.5E-29 185.7 17.7 309 2-336 117-437 (438)
36 KOG2532 Permease of the major 99.9 3.5E-24 7.7E-29 180.5 17.2 298 2-333 127-448 (466)
37 PRK03893 putative sialic acid 99.9 4.2E-24 9E-29 186.7 18.2 300 1-310 106-430 (496)
38 TIGR00890 2A0111 Oxalate/Forma 99.9 4.3E-24 9.2E-29 180.4 17.5 275 1-321 89-371 (377)
39 PRK11010 ampG muropeptide tran 99.9 5.7E-24 1.2E-28 183.8 18.0 291 2-334 106-404 (491)
40 PRK10091 MFS transport protein 99.9 3E-23 6.5E-28 174.9 20.2 270 1-323 89-367 (382)
41 PRK10504 putative transporter; 99.9 1.9E-23 4.1E-28 181.2 19.1 291 1-308 96-415 (471)
42 PRK14995 methyl viologen resis 99.9 1.3E-23 2.8E-28 182.5 17.9 293 1-308 92-413 (495)
43 TIGR00900 2A0121 H+ Antiporter 99.9 4.6E-23 9.9E-28 173.3 19.2 264 2-308 91-363 (365)
44 PRK10213 nepI ribonucleoside t 99.9 1.3E-22 2.8E-27 171.2 21.1 259 1-313 106-371 (394)
45 TIGR00711 efflux_EmrB drug res 99.9 6.4E-23 1.4E-27 178.9 19.8 294 1-308 88-410 (485)
46 TIGR00899 2A0120 sugar efflux 99.9 1.3E-22 2.9E-27 171.1 21.1 273 1-326 85-368 (375)
47 PRK15034 nitrate/nitrite trans 99.9 1.5E-22 3.3E-27 169.5 19.3 281 1-332 126-454 (462)
48 PRK15402 multidrug efflux syst 99.9 1.2E-22 2.5E-27 172.9 18.5 278 1-322 99-384 (406)
49 TIGR00881 2A0104 phosphoglycer 99.9 1.8E-23 4E-28 176.6 13.0 284 2-310 82-374 (379)
50 PRK09874 drug efflux system pr 99.9 1.1E-22 2.4E-27 173.4 17.8 280 1-330 105-396 (408)
51 TIGR00897 2A0118 polyol permea 99.9 3.6E-22 7.7E-27 169.4 20.7 283 2-327 104-396 (402)
52 TIGR00710 efflux_Bcr_CflA drug 99.9 3E-22 6.5E-27 169.6 19.2 262 1-307 91-360 (385)
53 PRK03699 putative transporter; 99.9 1.8E-22 4E-27 170.8 17.7 273 1-326 93-374 (394)
54 KOG2533 Permease of the major 99.9 1.2E-23 2.6E-28 177.6 9.7 201 1-220 132-352 (495)
55 PRK03633 putative MFS family t 99.9 1.2E-21 2.5E-26 165.2 21.6 264 1-322 92-362 (381)
56 PF07690 MFS_1: Major Facilita 99.9 1.2E-22 2.7E-27 169.8 13.4 261 1-299 83-352 (352)
57 cd06174 MFS The Major Facilita 99.9 1.5E-21 3.3E-26 163.2 19.8 255 1-328 85-348 (352)
58 COG2223 NarK Nitrate/nitrite t 99.9 1.9E-22 4E-27 161.4 13.1 283 2-330 104-399 (417)
59 PRK11043 putative transporter; 99.9 1.1E-21 2.4E-26 166.7 18.8 260 1-308 92-357 (401)
60 PRK11195 lysophospholipid tran 99.9 3.5E-21 7.6E-26 162.5 21.2 266 7-316 92-364 (393)
61 TIGR00902 2A0127 phenyl propri 99.9 1.5E-21 3.3E-26 164.4 18.8 273 1-324 92-371 (382)
62 PLN00028 nitrate transmembrane 99.9 2.4E-22 5.1E-27 173.5 13.5 285 2-328 123-429 (476)
63 PRK15011 sugar efflux transpor 99.9 2.6E-21 5.7E-26 163.6 19.4 279 2-334 104-392 (393)
64 PRK11646 multidrug resistance 99.9 1.4E-21 3E-26 165.3 17.6 257 1-309 97-360 (400)
65 PRK15403 multidrug efflux syst 99.9 4.6E-21 9.9E-26 162.8 20.7 303 1-349 102-412 (413)
66 PRK11102 bicyclomycin/multidru 99.9 2.6E-21 5.6E-26 163.3 18.3 259 1-303 77-344 (377)
67 PRK10473 multidrug efflux syst 99.9 3.8E-21 8.2E-26 163.0 18.3 252 2-308 90-349 (392)
68 TIGR00892 2A0113 monocarboxyla 99.9 2.7E-22 5.7E-27 172.4 10.8 295 2-323 106-412 (455)
69 PRK11128 putative 3-phenylprop 99.9 6.1E-21 1.3E-25 160.8 18.8 271 1-322 92-369 (382)
70 PRK11902 ampG muropeptide tran 99.9 6.6E-21 1.4E-25 161.8 18.5 277 3-324 94-382 (402)
71 PRK06814 acylglycerophosphoeth 99.9 1.1E-20 2.3E-25 180.5 19.5 275 1-308 106-396 (1140)
72 KOG1330 Sugar transporter/spin 99.9 4.2E-22 9.2E-27 160.8 7.2 272 2-308 120-412 (493)
73 PRK10054 putative transporter; 99.9 8.5E-21 1.9E-25 160.3 15.3 277 2-326 95-378 (395)
74 PRK08633 2-acyl-glycerophospho 99.9 4.8E-20 1E-24 176.7 20.3 264 2-307 102-383 (1146)
75 PRK09528 lacY galactoside perm 99.9 1.8E-20 3.8E-25 160.2 15.0 261 35-334 137-405 (420)
76 TIGR00896 CynX cyanate transpo 99.8 1.3E-19 2.8E-24 151.5 19.3 255 1-309 85-349 (355)
77 TIGR00901 2A0125 AmpG-related 99.8 1.1E-19 2.4E-24 152.1 16.0 257 3-292 83-355 (356)
78 PRK10133 L-fucose transporter; 99.8 1.6E-19 3.4E-24 154.2 16.1 258 1-309 115-408 (438)
79 TIGR00885 fucP L-fucose:H+ sym 99.8 3.3E-19 7.3E-24 150.8 17.7 253 2-308 93-381 (410)
80 PRK11652 emrD multidrug resist 99.8 4.5E-19 9.8E-24 150.4 18.3 259 1-308 94-360 (394)
81 TIGR00889 2A0110 nucleoside tr 99.8 2.4E-19 5.3E-24 152.3 16.6 292 2-338 91-408 (418)
82 TIGR01272 gluP glucose/galacto 99.8 7.5E-19 1.6E-23 142.8 17.7 255 2-308 9-290 (310)
83 TIGR00792 gph sugar (Glycoside 99.8 2.6E-19 5.7E-24 154.1 15.9 259 4-308 100-380 (437)
84 TIGR00886 2A0108 nitrite extru 99.8 1.7E-19 3.7E-24 151.6 12.3 257 2-294 90-365 (366)
85 TIGR00882 2A0105 oligosacchari 99.8 1.7E-18 3.8E-23 146.8 17.8 277 6-327 102-390 (396)
86 TIGR02718 sider_RhtX_FptX side 99.8 3.5E-18 7.7E-23 144.7 18.4 272 7-322 101-381 (390)
87 PF05977 MFS_3: Transmembrane 99.8 4.9E-18 1.1E-22 146.0 16.5 271 2-318 102-380 (524)
88 KOG3764 Vesicular amine transp 99.8 3.2E-19 6.9E-24 141.3 5.7 277 1-326 157-448 (464)
89 TIGR00805 oat sodium-independe 99.7 8.2E-17 1.8E-21 142.7 16.6 292 3-308 172-581 (633)
90 KOG2504 Monocarboxylate transp 99.7 3.1E-18 6.7E-23 146.5 6.1 308 6-333 138-476 (509)
91 PRK10207 dipeptide/tripeptide 99.7 2.1E-16 4.5E-21 136.4 16.3 290 6-305 108-438 (489)
92 PF11700 ATG22: Vacuole efflux 99.7 2.4E-15 5.2E-20 128.2 19.4 294 8-338 131-473 (477)
93 COG2807 CynX Cyanate permease 99.7 2.2E-15 4.7E-20 118.7 16.9 254 3-310 99-361 (395)
94 TIGR00924 yjdL_sub1_fam amino 99.7 6.8E-15 1.5E-19 127.0 19.1 317 2-328 101-464 (475)
95 PRK09669 putative symporter Ya 99.7 1.3E-15 2.9E-20 131.0 14.6 254 6-308 112-388 (444)
96 KOG2615 Permease of the major 99.7 2.6E-16 5.6E-21 124.3 9.2 276 2-308 120-414 (451)
97 COG0738 FucP Fucose permease [ 99.7 1.6E-15 3.5E-20 121.3 12.5 256 2-310 103-386 (422)
98 PF13347 MFS_2: MFS/sugar tran 99.6 3E-14 6.5E-19 122.1 19.9 257 6-308 106-384 (428)
99 PRK10429 melibiose:sodium symp 99.6 5.2E-15 1.1E-19 128.2 14.8 263 6-308 109-393 (473)
100 PRK09584 tppB putative tripept 99.6 9.2E-15 2E-19 126.9 15.4 287 4-303 113-439 (500)
101 TIGR00788 fbt folate/biopterin 99.6 1.6E-15 3.5E-20 130.5 10.3 280 7-308 124-413 (468)
102 KOG4686 Predicted sugar transp 99.6 4.2E-15 9.1E-20 113.0 11.0 296 2-334 135-444 (459)
103 TIGR00806 rfc RFC reduced fola 99.6 2E-15 4.4E-20 124.9 8.3 286 2-302 114-409 (511)
104 PTZ00207 hypothetical protein; 99.6 1.9E-13 4.1E-18 118.5 20.4 310 2-329 119-549 (591)
105 TIGR02332 HpaX 4-hydroxyphenyl 99.6 3E-14 6.4E-19 121.3 15.4 179 147-337 7-194 (412)
106 TIGR01301 GPH_sucrose GPH fami 99.6 1.5E-13 3.2E-18 116.6 19.2 297 15-337 126-476 (477)
107 TIGR01299 synapt_SV2 synaptic 99.6 2.8E-14 6.1E-19 127.3 15.4 177 147-335 166-357 (742)
108 PRK10054 putative transporter; 99.6 5.1E-14 1.1E-18 119.2 15.3 160 163-334 22-184 (395)
109 PRK11663 regulatory protein Uh 99.6 3.4E-14 7.5E-19 121.9 14.4 173 151-335 26-201 (434)
110 PRK11462 putative transporter; 99.6 2.2E-13 4.7E-18 117.3 18.8 254 7-308 113-387 (460)
111 PF06609 TRI12: Fungal trichot 99.6 2.8E-13 6E-18 116.8 19.2 290 1-306 129-465 (599)
112 TIGR00710 efflux_Bcr_CflA drug 99.6 3E-14 6.5E-19 120.8 13.3 163 163-337 20-185 (385)
113 TIGR00891 2A0112 putative sial 99.6 8.3E-14 1.8E-18 118.9 15.1 177 147-335 11-191 (405)
114 COG2271 UhpC Sugar phosphate p 99.6 4.3E-14 9.4E-19 113.9 11.6 179 147-337 28-211 (448)
115 COG2270 Permeases of the major 99.6 6E-13 1.3E-17 107.5 17.8 292 3-338 115-434 (438)
116 PRK09848 glucuronide transport 99.6 1.7E-13 3.6E-18 118.3 15.6 252 8-308 114-388 (448)
117 PF03825 Nuc_H_symport: Nucleo 99.6 3.5E-13 7.5E-18 112.9 16.9 259 2-308 90-364 (400)
118 PRK03545 putative arabinose tr 99.6 1.5E-13 3.2E-18 116.6 14.9 157 167-335 28-187 (390)
119 TIGR00895 2A0115 benzoate tran 99.6 4E-14 8.7E-19 120.5 11.6 175 149-335 18-195 (398)
120 TIGR00893 2A0114 d-galactonate 99.5 1.1E-13 2.4E-18 117.7 13.8 160 165-336 11-173 (399)
121 PRK10213 nepI ribonucleoside t 99.5 2.3E-13 4.9E-18 115.2 14.9 156 168-335 40-198 (394)
122 PRK10489 enterobactin exporter 99.5 2.2E-13 4.7E-18 116.6 14.9 187 137-335 10-199 (417)
123 PRK11551 putative 3-hydroxyphe 99.5 1.1E-13 2.3E-18 118.2 12.3 160 164-335 31-193 (406)
124 COG2814 AraJ Arabinose efflux 99.5 3.4E-13 7.4E-18 109.9 14.3 172 150-333 15-189 (394)
125 PF01306 LacY_symp: LacY proto 99.5 5.4E-14 1.2E-18 115.7 9.4 280 14-338 115-406 (412)
126 COG2211 MelB Na+/melibiose sym 99.5 2.8E-13 6.1E-18 112.7 13.6 257 7-308 116-396 (467)
127 PRK10473 multidrug efflux syst 99.5 1.7E-13 3.6E-18 116.4 12.7 172 153-336 8-182 (392)
128 PRK12307 putative sialic acid 99.5 3.2E-13 6.8E-18 116.1 13.9 150 150-311 20-171 (426)
129 PLN00028 nitrate transmembrane 99.5 6.6E-13 1.4E-17 115.1 15.5 157 164-333 52-220 (476)
130 PRK03699 putative transporter; 99.5 5.7E-13 1.2E-17 113.1 14.0 167 147-325 6-176 (394)
131 TIGR00711 efflux_EmrB drug res 99.5 1.3E-13 2.7E-18 120.6 10.3 169 155-335 9-180 (485)
132 PRK03893 putative sialic acid 99.5 5E-13 1.1E-17 117.2 13.8 156 147-314 19-176 (496)
133 PF07690 MFS_1: Major Facilita 99.5 2.3E-13 4.9E-18 113.9 11.1 151 165-327 13-167 (352)
134 PRK14995 methyl viologen resis 99.5 3.8E-13 8.2E-18 117.4 12.7 176 149-336 7-186 (495)
135 PRK15403 multidrug efflux syst 99.5 6.7E-13 1.4E-17 113.1 13.7 160 165-336 33-195 (413)
136 TIGR00712 glpT glycerol-3-phos 99.5 6.7E-13 1.5E-17 114.2 13.6 179 148-335 27-209 (438)
137 PRK10091 MFS transport protein 99.5 6.6E-13 1.4E-17 112.2 13.2 160 165-336 20-182 (382)
138 KOG1330 Sugar transporter/spin 99.5 8.7E-14 1.9E-18 113.3 7.4 186 147-344 32-221 (493)
139 TIGR00881 2A0104 phosphoglycer 99.5 2E-13 4.4E-18 115.4 10.0 160 164-335 11-174 (379)
140 TIGR00900 2A0121 H+ Antiporter 99.5 6.9E-13 1.5E-17 111.6 13.1 152 165-323 16-170 (365)
141 PRK11273 glpT sn-glycerol-3-ph 99.5 1E-12 2.2E-17 113.5 14.2 160 167-335 48-211 (452)
142 PRK11652 emrD multidrug resist 99.5 1.8E-12 3.8E-17 110.2 15.0 160 165-336 25-187 (394)
143 PRK11646 multidrug resistance 99.5 1.4E-12 3E-17 110.7 14.2 157 166-334 28-187 (400)
144 PF03209 PUCC: PUCC protein; 99.5 1.3E-11 2.8E-16 100.1 18.4 261 7-308 93-363 (403)
145 PRK10504 putative transporter; 99.5 1.3E-12 2.7E-17 113.8 13.4 169 154-334 16-187 (471)
146 PRK15402 multidrug efflux syst 99.5 2.2E-12 4.9E-17 110.0 14.5 161 164-336 29-192 (406)
147 PRK09874 drug efflux system pr 99.4 4E-12 8.8E-17 108.6 15.7 159 164-335 30-196 (408)
148 PRK15462 dipeptide/tripeptide 99.4 1E-12 2.2E-17 112.1 11.7 145 164-319 25-176 (493)
149 TIGR00886 2A0108 nitrite extru 99.4 2.9E-12 6.2E-17 107.9 14.3 135 161-307 14-151 (366)
150 PRK15034 nitrate/nitrite trans 99.4 4E-12 8.7E-17 107.3 14.7 151 147-305 33-186 (462)
151 PRK09556 uhpT sugar phosphate 99.4 9.4E-13 2E-17 114.2 10.5 178 149-333 30-213 (467)
152 PF03137 OATP: Organic Anion T 99.4 1.9E-14 4.1E-19 124.5 -0.0 297 3-308 141-514 (539)
153 PRK11195 lysophospholipid tran 99.4 3.9E-12 8.6E-17 107.7 13.9 151 169-335 24-176 (393)
154 PRK11102 bicyclomycin/multidru 99.4 1.5E-12 3.2E-17 110.1 11.1 158 166-335 9-169 (377)
155 PRK05122 major facilitator sup 99.4 7.6E-12 1.6E-16 106.6 15.2 145 164-312 31-178 (399)
156 PRK10077 xylE D-xylose transpo 99.4 9.9E-12 2.1E-16 108.6 16.2 150 185-336 59-218 (479)
157 PRK11043 putative transporter; 99.4 7.8E-12 1.7E-16 106.5 15.2 147 170-328 28-177 (401)
158 TIGR00890 2A0111 Oxalate/Forma 99.4 1.2E-12 2.6E-17 110.7 10.1 157 164-333 19-178 (377)
159 TIGR00897 2A0118 polyol permea 99.4 3.2E-12 7E-17 108.8 12.7 134 167-308 32-168 (402)
160 TIGR00903 2A0129 major facilit 99.4 2.2E-12 4.7E-17 107.8 11.4 160 164-336 7-169 (368)
161 TIGR00924 yjdL_sub1_fam amino 99.4 2.5E-12 5.4E-17 111.2 11.0 146 162-319 24-179 (475)
162 TIGR00879 SP MFS transporter, 99.4 2.9E-12 6.2E-17 111.9 11.6 141 185-335 75-219 (481)
163 KOG2563 Permease of the major 99.4 4.1E-12 8.8E-17 103.4 11.3 264 5-308 142-421 (480)
164 PRK10207 dipeptide/tripeptide 99.4 8.1E-12 1.7E-16 108.1 13.9 158 147-316 14-178 (489)
165 PRK12382 putative transporter; 99.4 7.9E-12 1.7E-16 106.2 13.3 144 165-312 32-178 (392)
166 TIGR00885 fucP L-fucose:H+ sym 99.4 1.3E-11 2.8E-16 104.9 14.4 133 165-306 20-154 (410)
167 TIGR00894 2A0114euk Na(+)-depe 99.4 4.5E-12 9.7E-17 110.1 11.7 147 178-334 71-221 (465)
168 PRK03633 putative MFS family t 99.4 1E-11 2.2E-16 105.0 13.2 143 154-308 12-156 (381)
169 TIGR00892 2A0113 monocarboxyla 99.4 1E-11 2.2E-16 107.2 12.8 167 147-326 18-188 (455)
170 TIGR00887 2A0109 phosphate:H+ 99.4 2.5E-11 5.5E-16 106.3 15.4 145 185-335 60-227 (502)
171 PRK15462 dipeptide/tripeptide 99.4 1.2E-10 2.6E-15 99.6 18.7 296 7-305 104-437 (493)
172 TIGR00805 oat sodium-independe 99.3 3.3E-11 7.1E-16 107.4 13.7 162 147-308 32-234 (633)
173 PRK10406 alpha-ketoglutarate t 99.3 5.6E-11 1.2E-15 102.2 14.3 145 157-305 31-183 (432)
174 cd06174 MFS The Major Facilita 99.3 2.9E-11 6.4E-16 101.1 12.3 147 164-322 15-164 (352)
175 PRK09705 cynX putative cyanate 99.3 4.1E-11 8.9E-16 101.6 13.1 132 164-308 25-158 (393)
176 PF06609 TRI12: Fungal trichot 99.3 3.1E-11 6.8E-16 104.3 12.2 149 166-327 62-212 (599)
177 PRK10642 proline/glycine betai 99.3 8.3E-11 1.8E-15 102.7 15.0 178 153-335 21-215 (490)
178 PTZ00207 hypothetical protein; 99.3 1.1E-10 2.3E-15 101.7 15.4 164 164-335 43-208 (591)
179 COG2223 NarK Nitrate/nitrite t 99.3 2.4E-11 5.1E-16 98.4 10.5 174 150-334 16-195 (417)
180 TIGR00880 2_A_01_02 Multidrug 99.3 2.5E-11 5.4E-16 87.1 9.7 134 189-334 6-140 (141)
181 PF05977 MFS_3: Transmembrane 99.3 6.2E-11 1.4E-15 102.6 13.7 169 139-318 5-176 (524)
182 KOG2615 Permease of the major 99.3 7.3E-12 1.6E-16 99.6 7.3 110 185-307 72-181 (451)
183 PRK15075 citrate-proton sympor 99.3 3.7E-11 8E-16 103.3 12.3 153 149-305 16-176 (434)
184 PRK09528 lacY galactoside perm 99.3 9.5E-11 2.1E-15 100.5 14.4 161 166-334 28-193 (420)
185 PRK06814 acylglycerophosphoeth 99.3 9.7E-11 2.1E-15 112.8 15.8 188 139-335 6-197 (1140)
186 PRK09584 tppB putative tripept 99.3 8.2E-11 1.8E-15 102.5 13.8 144 164-318 37-187 (500)
187 KOG3626 Organic anion transpor 99.3 1.9E-10 4.1E-15 100.5 15.6 290 5-308 239-649 (735)
188 PRK10133 L-fucose transporter; 99.3 2.2E-10 4.7E-15 98.3 15.5 134 164-306 42-177 (438)
189 PRK08633 2-acyl-glycerophospho 99.3 8.6E-11 1.9E-15 113.5 14.1 115 185-308 51-165 (1146)
190 TIGR01301 GPH_sucrose GPH fami 99.3 3.1E-10 6.8E-15 96.7 15.6 188 147-336 4-222 (477)
191 TIGR00899 2A0120 sugar efflux 99.3 8.8E-11 1.9E-15 99.2 12.1 158 167-336 16-180 (375)
192 TIGR00806 rfc RFC reduced fola 99.2 5.7E-10 1.2E-14 93.1 15.0 158 164-334 42-204 (511)
193 TIGR00898 2A0119 cation transp 99.2 5.8E-11 1.3E-15 104.4 9.6 151 170-335 111-266 (505)
194 PRK09952 shikimate transporter 99.2 3.2E-10 7E-15 97.5 13.6 112 191-306 74-185 (438)
195 KOG0569 Permease of the major 99.2 4.8E-10 1E-14 94.6 14.1 143 185-336 64-208 (485)
196 TIGR00901 2A0125 AmpG-related 99.2 3.1E-10 6.8E-15 95.1 11.4 160 166-335 6-181 (356)
197 PRK11010 ampG muropeptide tran 99.2 5.8E-10 1.3E-14 97.1 13.3 162 164-336 28-198 (491)
198 PRK11902 ampG muropeptide tran 99.2 6.6E-10 1.4E-14 94.7 13.2 165 159-335 10-184 (402)
199 TIGR00896 CynX cyanate transpo 99.2 3.6E-10 7.9E-15 94.7 11.3 131 164-308 16-148 (355)
200 PF06813 Nodulin-like: Nodulin 99.1 5.5E-10 1.2E-14 86.4 10.7 166 161-334 15-183 (250)
201 TIGR00882 2A0105 oligosacchari 99.1 4.2E-10 9E-15 95.8 10.6 165 164-334 18-185 (396)
202 KOG3764 Vesicular amine transp 99.1 1.4E-10 3.1E-15 93.0 5.8 141 185-337 110-252 (464)
203 TIGR00883 2A0106 metabolite-pr 99.1 1.2E-09 2.5E-14 93.0 11.6 111 192-306 46-156 (394)
204 PRK15011 sugar efflux transpor 99.1 4.3E-09 9.4E-14 89.4 15.0 157 167-336 34-198 (393)
205 KOG0255 Synaptic vesicle trans 99.1 1.1E-09 2.4E-14 96.6 11.7 136 185-335 122-257 (521)
206 KOG2325 Predicted transporter/ 99.1 3.1E-10 6.8E-15 95.1 7.5 291 2-323 129-465 (488)
207 KOG0254 Predicted transporter 99.0 3.9E-09 8.5E-14 92.7 12.6 137 185-335 93-232 (513)
208 KOG2532 Permease of the major 99.0 2.8E-09 6E-14 90.9 9.6 141 185-335 77-219 (466)
209 PRK11128 putative 3-phenylprop 99.0 1E-08 2.2E-13 86.8 12.5 145 164-320 20-167 (382)
210 TIGR00902 2A0127 phenyl propri 99.0 1.4E-08 3E-13 86.0 12.9 143 164-319 20-166 (382)
211 TIGR00792 gph sugar (Glycoside 98.9 7.5E-09 1.6E-13 89.4 10.8 160 171-336 23-198 (437)
212 PF03092 BT1: BT1 family; Int 98.9 2E-09 4.3E-14 91.8 7.0 282 4-308 87-380 (433)
213 COG3104 PTR2 Dipeptide/tripept 98.9 5.2E-09 1.1E-13 87.1 7.9 176 147-333 21-206 (498)
214 COG3104 PTR2 Dipeptide/tripept 98.9 1E-07 2.2E-12 79.6 14.7 318 3-329 117-484 (498)
215 TIGR02718 sider_RhtX_FptX side 98.9 7.6E-08 1.7E-12 81.8 14.3 173 154-334 7-186 (390)
216 COG0738 FucP Fucose permease [ 98.9 7.3E-08 1.6E-12 78.2 12.9 134 165-307 30-165 (422)
217 KOG3098 Uncharacterized conser 98.9 2.3E-07 5E-12 78.0 16.2 268 2-306 101-412 (461)
218 KOG2504 Monocarboxylate transp 98.9 1.8E-08 3.9E-13 87.2 9.7 175 147-333 45-222 (509)
219 KOG2816 Predicted transporter 98.8 1.8E-08 3.8E-13 85.7 9.4 253 18-307 127-391 (463)
220 PF00083 Sugar_tr: Sugar (and 98.8 4.2E-11 9.1E-16 103.8 -6.8 142 185-335 50-194 (451)
221 KOG2533 Permease of the major 98.8 6.2E-08 1.3E-12 83.1 12.4 141 185-337 85-232 (495)
222 KOG2325 Predicted transporter/ 98.8 3.6E-08 7.7E-13 83.0 10.5 143 185-335 75-232 (488)
223 PF01770 Folate_carrier: Reduc 98.8 5.6E-08 1.2E-12 80.2 10.3 280 2-297 93-391 (412)
224 KOG2816 Predicted transporter 98.8 1.9E-07 4.2E-12 79.5 13.1 136 190-340 71-207 (463)
225 KOG0252 Inorganic phosphate tr 98.8 4.9E-08 1.1E-12 80.3 8.6 148 185-337 88-250 (538)
226 TIGR00889 2A0110 nucleoside tr 98.7 1.6E-07 3.4E-12 80.4 11.2 150 168-335 23-182 (418)
227 TIGR00880 2_A_01_02 Multidrug 98.7 2.9E-08 6.4E-13 71.0 5.0 86 2-87 50-140 (141)
228 PRK09669 putative symporter Ya 98.7 1.8E-07 4E-12 80.9 10.4 134 167-306 28-170 (444)
229 PRK10429 melibiose:sodium symp 98.7 3.4E-07 7.4E-12 79.8 11.8 135 165-305 23-166 (473)
230 PF01306 LacY_symp: LacY proto 98.6 6.5E-08 1.4E-12 80.3 6.5 153 165-328 24-184 (412)
231 PF13347 MFS_2: MFS/sugar tran 98.6 4.8E-07 1E-11 77.9 10.8 160 171-334 25-200 (428)
232 PRK11462 putative transporter; 98.5 3.6E-06 7.8E-11 73.0 13.3 136 166-307 27-171 (460)
233 PF05631 DUF791: Protein of un 98.5 1.3E-05 2.9E-10 64.7 15.2 154 173-338 59-222 (354)
234 PF06963 FPN1: Ferroportin1 (F 98.4 1.4E-05 3.1E-10 67.5 15.2 133 168-302 278-412 (432)
235 KOG0253 Synaptic vesicle trans 98.4 9.7E-07 2.1E-11 70.9 7.2 152 171-336 101-254 (528)
236 KOG3762 Predicted transporter 98.4 9.7E-07 2.1E-11 74.3 7.1 141 174-326 397-541 (618)
237 TIGR00788 fbt folate/biopterin 98.3 7E-06 1.5E-10 71.3 11.2 175 147-336 25-212 (468)
238 KOG3810 Micronutrient transpor 98.3 1.8E-05 3.9E-10 63.1 11.7 276 4-301 96-381 (433)
239 COG2807 CynX Cyanate permease 98.2 3.1E-05 6.8E-10 62.4 11.8 149 164-326 28-180 (395)
240 PF02487 CLN3: CLN3 protein; 98.1 6.4E-05 1.4E-09 62.5 12.4 60 246-306 336-395 (402)
241 PRK09848 glucuronide transport 98.1 9.6E-05 2.1E-09 64.2 14.3 126 173-303 34-172 (448)
242 TIGR00926 2A1704 Peptide:H+ sy 98.1 6E-05 1.3E-09 67.6 13.1 132 173-308 13-150 (654)
243 TIGR00939 2a57 Equilibrative N 98.1 8.8E-05 1.9E-09 63.4 12.9 116 185-302 311-428 (437)
244 PF03825 Nuc_H_symport: Nucleo 98.1 2.3E-05 5E-10 66.3 9.3 124 164-301 18-144 (400)
245 PF03209 PUCC: PUCC protein; 98.0 9E-05 2E-09 61.1 10.1 112 196-308 29-151 (403)
246 PF03092 BT1: BT1 family; Int 97.9 9E-05 1.9E-09 63.7 10.0 154 172-334 14-177 (433)
247 PF11700 ATG22: Vacuole efflux 97.9 0.00043 9.3E-09 60.0 14.0 143 185-337 74-252 (477)
248 PF12832 MFS_1_like: MFS_1 lik 97.9 2.6E-05 5.6E-10 48.5 4.8 60 160-219 12-73 (77)
249 KOG2563 Permease of the major 97.9 9.9E-05 2.2E-09 61.3 9.4 118 185-308 83-202 (480)
250 PF05978 UNC-93: Ion channel r 97.9 0.00047 1E-08 49.6 11.6 109 185-306 41-149 (156)
251 PF07672 MFS_Mycoplasma: Mycop 97.9 0.00053 1.1E-08 52.9 12.1 51 35-85 2-61 (267)
252 COG2211 MelB Na+/melibiose sym 97.8 0.00037 8E-09 59.2 10.9 165 165-335 29-210 (467)
253 PF00854 PTR2: POT family; In 97.6 0.0054 1.2E-07 51.9 15.0 82 4-85 34-122 (372)
254 PF05631 DUF791: Protein of un 97.5 0.0014 3E-08 53.4 10.4 172 1-207 119-304 (354)
255 PF01733 Nucleoside_tran: Nucl 97.5 2.3E-05 5.1E-10 64.0 0.0 117 185-302 186-304 (309)
256 TIGR00769 AAA ADP/ATP carrier 97.4 0.0055 1.2E-07 52.9 13.5 113 195-307 58-190 (472)
257 TIGR00769 AAA ADP/ATP carrier 97.3 0.055 1.2E-06 46.9 18.3 40 23-62 149-188 (472)
258 KOG4332 Predicted sugar transp 97.3 0.0067 1.5E-07 47.3 11.3 131 154-289 255-387 (454)
259 PF13000 Acatn: Acetyl-coenzym 97.2 0.0058 1.3E-07 52.1 10.8 48 15-62 130-177 (544)
260 PF03137 OATP: Organic Anion T 97.2 5.7E-05 1.2E-09 66.4 -1.4 149 158-306 13-201 (539)
261 KOG0637 Sucrose transporter an 97.1 0.0012 2.5E-08 55.4 5.8 156 147-304 32-201 (498)
262 PF01770 Folate_carrier: Reduc 97.1 0.012 2.6E-07 49.5 11.7 129 167-308 23-155 (412)
263 KOG0637 Sucrose transporter an 97.0 0.0021 4.5E-08 53.9 6.6 54 14-67 153-207 (498)
264 COG0477 ProP Permeases of the 97.0 0.02 4.3E-07 46.8 12.5 132 167-308 21-158 (338)
265 KOG3626 Organic anion transpor 97.0 0.011 2.3E-07 53.3 10.7 161 147-307 96-298 (735)
266 KOG3574 Acetyl-CoA transporter 96.9 0.026 5.7E-07 46.5 11.5 40 269-308 392-431 (510)
267 TIGR00926 2A1704 Peptide:H+ sy 96.8 0.043 9.3E-07 49.9 13.2 77 6-82 88-178 (654)
268 TIGR01272 gluP glucose/galacto 96.8 0.0058 1.3E-07 50.2 7.2 61 246-307 11-71 (310)
269 KOG1479 Nucleoside transporter 96.7 0.016 3.5E-07 48.4 9.1 82 4-90 118-208 (406)
270 KOG1237 H+/oligopeptide sympor 96.7 0.1 2.2E-06 46.6 14.3 79 5-83 154-242 (571)
271 PF03219 TLC: TLC ATP/ADP tran 96.5 0.051 1.1E-06 47.4 11.2 39 24-62 165-203 (491)
272 KOG3762 Predicted transporter 96.4 0.0055 1.2E-07 52.6 4.6 83 1-83 457-544 (618)
273 PF00854 PTR2: POT family; In 96.3 0.011 2.4E-07 50.0 6.4 111 213-326 3-117 (372)
274 COG2270 Permeases of the major 96.1 0.041 8.9E-07 46.1 8.1 108 185-301 62-170 (438)
275 PF06813 Nodulin-like: Nodulin 96.0 0.0083 1.8E-07 47.0 3.8 87 2-89 95-185 (250)
276 PF06963 FPN1: Ferroportin1 (F 96.0 0.32 6.9E-06 41.8 13.2 142 185-326 42-194 (432)
277 PF06779 DUF1228: Protein of u 95.9 0.027 5.8E-07 35.6 5.0 67 165-231 9-77 (85)
278 KOG3574 Acetyl-CoA transporter 95.9 0.089 1.9E-06 43.6 9.0 49 167-217 49-104 (510)
279 COG0477 ProP Permeases of the 95.8 0.012 2.6E-07 48.0 4.2 76 2-77 93-176 (338)
280 COG3202 ATP/ADP translocase [E 95.7 0.43 9.3E-06 41.1 12.5 38 25-62 170-207 (509)
281 PRK03612 spermidine synthase; 95.6 0.29 6.2E-06 43.4 12.0 47 280-326 143-191 (521)
282 KOG4686 Predicted sugar transp 95.5 0.0016 3.5E-08 51.1 -1.9 115 185-308 83-198 (459)
283 PF05978 UNC-93: Ion channel r 95.3 0.022 4.8E-07 41.1 3.5 58 2-59 88-145 (156)
284 KOG3098 Uncharacterized conser 94.9 0.51 1.1E-05 40.7 11.0 106 185-303 54-159 (461)
285 KOG4332 Predicted sugar transp 94.5 0.12 2.7E-06 40.6 5.7 54 173-226 62-117 (454)
286 PF02487 CLN3: CLN3 protein; 94.4 0.024 5.2E-07 47.7 1.9 62 1-62 333-394 (402)
287 KOG1479 Nucleoside transporter 94.3 1 2.2E-05 38.1 11.0 54 154-207 24-82 (406)
288 PF03219 TLC: TLC ATP/ADP tran 94.2 0.97 2.1E-05 39.7 11.3 114 194-307 72-205 (491)
289 KOG1237 H+/oligopeptide sympor 94.1 1.2 2.6E-05 40.1 11.8 157 168-325 58-238 (571)
290 KOG2881 Predicted membrane pro 93.0 2.3 5.1E-05 33.1 10.0 33 193-225 252-284 (294)
291 COG3202 ATP/ADP translocase [E 91.3 8.8 0.00019 33.5 12.5 115 193-307 74-209 (509)
292 PF13000 Acatn: Acetyl-coenzym 86.5 9.7 0.00021 33.5 9.6 36 269-304 141-176 (544)
293 PF02990 EMP70: Endomembrane p 83.1 17 0.00036 32.7 10.1 28 185-212 301-328 (521)
294 TIGR00939 2a57 Equilibrative N 78.3 23 0.00051 30.9 9.2 28 190-217 54-81 (437)
295 PRK15015 carbon starvation pro 76.0 65 0.0014 29.7 13.1 35 30-65 79-114 (701)
296 KOG3880 Predicted small molecu 75.9 2.3 5E-05 34.5 2.3 60 246-305 342-401 (409)
297 KOG3880 Predicted small molecu 74.6 2.6 5.6E-05 34.3 2.3 62 1-62 340-401 (409)
298 PRK10697 DNA-binding transcrip 73.2 4.5 9.7E-05 27.5 2.8 31 79-109 57-87 (118)
299 PF11947 DUF3464: Protein of u 72.6 13 0.00029 26.7 5.1 40 258-297 106-145 (153)
300 COG1422 Predicted membrane pro 68.8 48 0.001 25.0 10.4 13 75-87 58-70 (201)
301 COG5336 Uncharacterized protei 67.5 32 0.0007 22.9 5.6 49 278-326 38-89 (116)
302 PF07857 DUF1632: CEO family ( 67.1 36 0.00078 27.1 7.0 25 64-88 114-138 (254)
303 PRK09609 hypothetical protein; 62.5 87 0.0019 25.8 10.4 17 44-60 48-64 (312)
304 PF01733 Nucleoside_tran: Nucl 62.5 2.6 5.6E-05 34.7 0.1 58 3-60 248-305 (309)
305 COG5336 Uncharacterized protei 59.6 18 0.00039 24.0 3.4 20 197-216 58-78 (116)
306 PF11151 DUF2929: Protein of u 58.6 34 0.00074 19.8 5.0 43 47-89 14-56 (57)
307 KOG3810 Micronutrient transpor 56.5 28 0.00061 29.3 4.9 93 201-308 62-156 (433)
308 COG1288 Predicted membrane pro 56.5 78 0.0017 27.5 7.4 27 63-89 217-245 (481)
309 PRK03612 spermidine synthase; 55.6 21 0.00047 32.0 4.6 54 8-62 115-168 (521)
310 PF10183 ESSS: ESSS subunit of 48.7 37 0.00081 22.7 3.8 27 63-89 58-85 (105)
311 TIGR02978 phageshock_pspC phag 48.2 18 0.00039 24.9 2.3 27 64-90 31-63 (121)
312 PF04341 DUF485: Protein of un 47.1 77 0.0017 20.5 5.2 40 136-177 6-45 (91)
313 KOG3097 Predicted membrane pro 45.2 85 0.0019 26.3 5.9 35 187-221 64-98 (390)
314 PF08997 UCR_6-4kD: Ubiquinol- 43.8 48 0.001 19.1 3.1 41 28-68 2-42 (56)
315 PRK02237 hypothetical protein; 43.4 55 0.0012 21.9 3.8 44 185-228 60-103 (109)
316 TIGR00986 3a0801s05tom22 mitoc 41.9 92 0.002 22.2 4.9 26 27-52 57-82 (145)
317 KOG2601 Iron transporter [Inor 41.9 1.8E+02 0.0039 25.1 7.3 34 188-221 70-103 (503)
318 PF02694 UPF0060: Uncharacteri 41.4 49 0.0011 22.1 3.3 44 185-228 58-101 (107)
319 PF04281 Tom22: Mitochondrial 38.9 92 0.002 22.1 4.6 28 27-54 59-86 (137)
320 PRK10263 DNA translocase FtsK; 38.3 1.1E+02 0.0024 30.9 6.5 20 190-209 61-80 (1355)
321 COG3162 Predicted membrane pro 38.1 1.2E+02 0.0025 20.0 5.7 66 133-200 11-76 (102)
322 PF11299 DUF3100: Protein of u 37.4 1.5E+02 0.0032 23.3 5.8 35 269-304 194-228 (241)
323 PLN02601 beta-carotene hydroxy 36.1 2.2E+02 0.0048 22.9 6.6 22 187-208 136-157 (303)
324 PF06779 DUF1228: Protein of u 35.9 1.2E+02 0.0026 19.4 5.5 64 14-80 5-72 (85)
325 KOG3312 Predicted membrane pro 35.6 93 0.002 22.1 4.1 28 82-109 27-54 (186)
326 COG2274 SunT ABC-type bacterio 35.2 3.7E+02 0.0079 25.7 9.1 20 189-208 165-184 (709)
327 KOG4830 Predicted sugar transp 34.4 40 0.00088 27.0 2.6 44 170-213 39-93 (412)
328 PF05297 Herpes_LMP1: Herpesvi 33.4 14 0.0003 29.4 0.0 15 323-337 176-190 (381)
329 COG0814 SdaC Amino acid permea 31.8 3.5E+02 0.0076 23.7 10.8 33 34-66 9-41 (415)
330 COG0861 TerC Membrane protein 31.0 2.8E+02 0.0061 22.3 10.1 27 17-43 30-56 (254)
331 PF03741 TerC: Integral membra 30.9 2.3E+02 0.0051 21.3 8.7 24 20-43 13-36 (183)
332 KOG1278 Endosomal membrane pro 30.6 33 0.00071 30.5 1.7 18 190-207 372-389 (628)
333 PF12273 RCR: Chitin synthesis 29.8 15 0.00032 25.7 -0.4 17 65-81 1-17 (130)
334 PF13940 Ldr_toxin: Toxin Ldr, 29.3 85 0.0018 15.7 2.3 20 188-207 15-34 (35)
335 KOG1277 Endosomal membrane pro 28.7 2.7E+02 0.0059 24.5 6.5 20 192-211 338-357 (593)
336 COG1422 Predicted membrane pro 28.2 99 0.0021 23.5 3.5 13 65-77 44-56 (201)
337 TIGR00267 conserved hypothetic 27.8 2.6E+02 0.0055 20.8 10.6 26 192-217 124-149 (169)
338 PF07556 DUF1538: Protein of u 26.3 2.4E+02 0.0053 21.9 5.4 85 2-87 61-148 (212)
339 PF11833 DUF3353: Protein of u 25.5 2E+02 0.0043 22.0 4.8 28 35-62 137-164 (194)
340 PF05545 FixQ: Cbb3-type cytoc 25.0 34 0.00073 18.9 0.6 11 324-334 23-33 (49)
341 PF06123 CreD: Inner membrane 24.4 5E+02 0.011 23.0 9.4 38 191-228 301-338 (430)
342 TIGR02230 ATPase_gene1 F0F1-AT 24.3 2.2E+02 0.0048 18.9 5.3 9 204-212 66-74 (100)
343 PF01405 PsbT: Photosystem II 24.3 1E+02 0.0022 14.9 2.2 11 80-90 18-28 (29)
344 COG2119 Predicted membrane pro 23.9 1.4E+02 0.0031 22.4 3.6 39 187-225 140-178 (190)
345 KOG0055 Multidrug/pheromone ex 23.5 7.3E+02 0.016 25.5 9.0 19 61-79 805-823 (1228)
346 PF15050 SCIMP: SCIMP protein 23.4 28 0.0006 23.5 0.0 11 64-74 4-14 (133)
347 PF13829 DUF4191: Domain of un 23.3 1.9E+02 0.0041 22.6 4.4 48 63-110 50-99 (224)
348 COG3462 Predicted membrane pro 22.1 2.5E+02 0.0055 18.9 4.1 8 99-106 88-95 (117)
349 PF15061 DUF4538: Domain of un 22.1 69 0.0015 18.6 1.4 19 63-81 4-22 (58)
350 PRK11715 inner membrane protei 21.4 5.8E+02 0.013 22.6 9.8 38 191-228 307-344 (436)
351 PF11947 DUF3464: Protein of u 21.4 1.2E+02 0.0025 22.1 2.8 24 136-159 52-75 (153)
352 PRK11875 psbT photosystem II r 20.2 1.3E+02 0.0029 14.7 2.1 10 81-90 19-28 (31)
353 PF04117 Mpv17_PMP22: Mpv17 / 20.2 1E+02 0.0022 18.4 2.0 31 20-50 30-60 (68)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-43 Score=291.31 Aligned_cols=347 Identities=31% Similarity=0.535 Sum_probs=299.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC------chhhHHHhhchHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI------IPWRILALTGLVP 74 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~------~~Wr~~f~~~~~~ 74 (350)
+++++++++|++.|+..|......+.|+.|..|++.||....+.+.+..+|.+++..++.. -.|++.+.+..++
T Consensus 114 ~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 114 PSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999999999766542 2699999999999
Q ss_pred HHHHHHHHhccCCChHHHHH-hCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHh-ccCCCcchhhhhhcccc-hhHHHH
Q 018767 75 CVLLLVGLCFVPESPRWLAK-VGLDKEFQVALRKLRGKDADITREAAEIQVYILT-LRSLPKASIRDLFKSKY-IRSVII 151 (350)
Q Consensus 75 ~~~~~~~~~~~~esp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~ 151 (350)
+++.++...++||||||+.. |++.++|++.++..++.+++.++.+++.++..++ .++.++.+++++++++. ++...+
T Consensus 194 ~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i 273 (485)
T KOG0569|consen 194 ALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLI 273 (485)
T ss_pred HHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHH
Confidence 99999999999999999987 8999999999999998765544443333333222 23346778999999864 455667
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 152 GVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
.+.+....++.+.+...+|...++++.|++... ......++...+.++++.++.||+|||+.++.+..++.+..+++.
T Consensus 274 ~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 274 GIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 777888889999999999999999999999875 888888999999999999999999999999999999999888887
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS 309 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 309 (350)
......+... +|..+..+.+.+.+...++.+.+|+.|-+.+|++|++.|+.+.++...++++..++-......+.+..
T Consensus 354 ~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~ 431 (485)
T KOG0569|consen 354 IALFLSNSFG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI 431 (485)
T ss_pred HHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7666554332 34455667888889999999999999999999999999999999999999999999999999998886
Q ss_pred ccchhhHHHHhhHHHhhheeeecccCCCCCHHHHHHhhhc
Q 018767 310 SSGTFFIYSAFSVITVLFVAKFVPETKGKTLEQIQASINK 349 (350)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (350)
+...+..+.+.+.+..+..++++||||+|+.+|+.++.++
T Consensus 432 g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~ 471 (485)
T KOG0569|consen 432 GPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEK 471 (485)
T ss_pred cchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHh
Confidence 6688889999999999999999999999999998887664
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1e-36 Score=264.91 Aligned_cols=331 Identities=23% Similarity=0.317 Sum_probs=226.9
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC---------------------
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI--------------------- 61 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~--------------------- 61 (350)
++.++++|+++|++.|...+....++.|++|+++|++++++......+|.++++.++..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGS 194 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 56789999999999999999999999999999999999999999999988888766421
Q ss_pred ------chhhHHHhhchHHHHHHHHHHhccCCChHHHHHhCChH-HHHHHHHHHhcCCcchH-HHHHHHHHHHHhccCCC
Q 018767 62 ------IPWRILALTGLVPCVLLLVGLCFVPESPRWLAKVGLDK-EFQVALRKLRGKDADIT-REAAEIQVYILTLRSLP 133 (350)
Q Consensus 62 ------~~Wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 133 (350)
.+||++|.+.++++++.++..+++||||+|+..++|.+ ++++.+++..+.+.+.+ ++.++.+ ++++..
T Consensus 195 ~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 270 (502)
T TIGR00887 195 CVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKAS----TAVEVP 270 (502)
T ss_pred ccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchh----ccccch
Confidence 26999999999988888888889999999998887764 46666665543221111 1111110 011112
Q ss_pred cchhhhhhcccc---hhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--------------HHHHHHHHHhhh
Q 018767 134 KASIRDLFKSKY---IRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--------------LGTILYACVQVP 196 (350)
Q Consensus 134 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 196 (350)
+.+++++++++. .++..+......+.....++....+.|.++++.|.+... .......++.++
T Consensus 271 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 350 (502)
T TIGR00887 271 KASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVP 350 (502)
T ss_pred hhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 235777776422 112223222222322223445666788888888776431 123334456677
Q ss_pred HHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC
Q 018767 197 ITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP 276 (350)
Q Consensus 197 ~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 276 (350)
+.+++++++||+|||+.++.+..+..++..+++....... ....+........+++.+..+..+.+..|.+|
T Consensus 351 g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p 422 (502)
T TIGR00887 351 GYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS--------THGFLAIYVLAQFFANFGPNATTFIVPGEVFP 422 (502)
T ss_pred HHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc--------hhHHHHHHHHHHHHHhcCCCchhhhhhhccCc
Confidence 8899999999999999988887777766665544321111 11111222222333455566777788999999
Q ss_pred cchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh-----------ccchhhHHHHhhHHHhhheeeecccCCCCCHHHHHH
Q 018767 277 INIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS-----------SSGTFFIYSAFSVITVLFVAKFVPETKGKTLEQIQA 345 (350)
Q Consensus 277 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (350)
++.|+++.|+.+.+++++++++|.+.+.+.+.. ....+.++++..++..+. .+++||++++++||+++
T Consensus 423 ~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 423 TRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEELSG 501 (502)
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHhhhC
Confidence 999999999999999999999999999988742 123556666666655554 46779999999888765
Q ss_pred h
Q 018767 346 S 346 (350)
Q Consensus 346 ~ 346 (350)
|
T Consensus 502 ~ 502 (502)
T TIGR00887 502 E 502 (502)
T ss_pred C
Confidence 3
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-35 Score=256.82 Aligned_cols=349 Identities=36% Similarity=0.577 Sum_probs=289.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhchHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTGLVPC 75 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~~~~~ 75 (350)
+|+++++++|+++|+|.|+.....+.|++|..|++.||...+..+....+|..++..++... +||..+.+..+++
T Consensus 140 ~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~ 219 (513)
T KOG0254|consen 140 PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPA 219 (513)
T ss_pred hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999998888777 6999999999999
Q ss_pred HHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcC-CcchHHHHHHHHHHHH--hccCCCcchhhhhhcccchhHHHHH
Q 018767 76 VLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGK-DADITREAAEIQVYIL--TLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 76 ~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
++..+..+++||||+|+.++++.+++++.++++++. +.+.+.+.++.+.... ......+..+.+++++...++..+.
T Consensus 220 ~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~ 299 (513)
T KOG0254|consen 220 VILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIG 299 (513)
T ss_pred HHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHH
Confidence 997777889999999999999999999999999883 3444444333331111 1111222246667765577888889
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHhCCCCc-hHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQAGLSSG-KLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+.+..+.++++++...+|.+.+++..+.+.. .......++..+++..++..+.||+|||+.++.+...+.++.++++..
T Consensus 300 ~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~ 379 (513)
T KOG0254|consen 300 LLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVV 379 (513)
T ss_pred HHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998877 577778888888899999999999999999999999999999998887
Q ss_pred HHhccccc-ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 232 FFLKGQNM-FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
........ ......+..+...+++...+..+..+++|.+.+|.+|.+.|+.+.++....+++.+.+-........+...
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~ 459 (513)
T KOG0254|consen 380 GVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG 459 (513)
T ss_pred HHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 66544321 22233567777788888899999999999999999999999999999999999988888777766666544
Q ss_pred -cchhhHHHHhhHHHhh-heeeecccCCCCCHHHHHHhhhc
Q 018767 311 -SGTFFIYSAFSVITVL-FVAKFVPETKGKTLEQIQASINK 349 (350)
Q Consensus 311 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 349 (350)
...+..+.+++.+... ..++++||+++++.+|+++.+++
T Consensus 460 ~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 460 IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 6677778887777777 78899999999999999886654
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.6e-34 Score=249.75 Aligned_cols=333 Identities=36% Similarity=0.625 Sum_probs=234.7
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC------------CchhhHHHhhc
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS------------IIPWRILALTG 71 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------------~~~Wr~~f~~~ 71 (350)
+.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.++++.++. ..+||+.|++.
T Consensus 121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~ 200 (479)
T PRK10077 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASE 200 (479)
T ss_pred HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHH
Confidence 457899999999999999999999999999999999999999999999998876542 23899999998
Q ss_pred hHHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHH
Q 018767 72 LVPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVII 151 (350)
Q Consensus 72 ~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (350)
+++.++..+..+++||+|+|+..+++.+++++..++..+.++. .+..++..+...+++ .. .+..+. ........
T Consensus 201 ~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~---~~~~~~-~~~~~~~~ 274 (479)
T PRK10077 201 AIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA-TQALQEIKHSLDHGR-KT---GGKLLM-FGVGVIVI 274 (479)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH-HHHHHHHHHHHHHhh-hh---hhhhcc-hhHHHHHH
Confidence 8888777666778999999988888888777666665443221 111111111111000 00 011111 11112222
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 152 GVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
......+....+++...++.|.+.++.+.+... ......++..+++.+++++++||+|||+.+..+.+++.++.+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~ 354 (479)
T PRK10077 275 GVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLG 354 (479)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHH
Confidence 222333334444556667888888888877654 555667788889999999999999999999999888888777765
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH---
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM--- 306 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--- 306 (350)
.....+.. ..........+..++.....+..+.++.|.+|++.|+++.|+.+..+++++++++.+.+.+.
T Consensus 355 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~ 427 (479)
T PRK10077 355 TAFYTQAP-------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNS 427 (479)
T ss_pred HHHhcCcc-------cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 43321111 12233334444445555555666799999999999999999999999999999988877655
Q ss_pred ---h-hhccchhhHHHHhhHHHhhheeeecccCCCCCHHHHHHhhhc
Q 018767 307 ---S-WSSSGTFFIYSAFSVITVLFVAKFVPETKGKTLEQIQASINK 349 (350)
Q Consensus 307 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (350)
+ .+....+.++++++++..++.+++.||+++++.+|.+++.++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 428 WLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred chhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 2 244556677777777777777778899999999888877654
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=6.1e-35 Score=257.45 Aligned_cols=325 Identities=18% Similarity=0.248 Sum_probs=231.2
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC-----------------ch
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI-----------------IP 63 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~-----------------~~ 63 (350)
+|++.++++|+++|++.|+..+...+++.|++|+++|++.+++..+++.+|.++++.++.. .+
T Consensus 253 ~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~g 332 (742)
T TIGR01299 253 QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHS 332 (742)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccccc
Confidence 3677899999999999999999999999999999999999999999999999888864421 16
Q ss_pred hhHHHhhchHHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcch----HHH--HHHHHHHHHh------ccC
Q 018767 64 WRILALTGLVPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADI----TRE--AAEIQVYILT------LRS 131 (350)
Q Consensus 64 Wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~------~~~ 131 (350)
||+.+++.+++.++.++..+++||||+|+..+++.+++.+.++++++.+... .+. .++.+..... +++
T Consensus 333 WR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (742)
T TIGR01299 333 WRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESD 412 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhccccc
Confidence 9999999988888888888899999999999999999999999987654321 111 0000000000 000
Q ss_pred CC-----------------cchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHh----------------
Q 018767 132 LP-----------------KASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQA---------------- 178 (350)
Q Consensus 132 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 178 (350)
.. ..+++++|+++.+++.++. .+.++.....++.+..|.|.++++.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l-~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~ 491 (742)
T TIGR01299 413 TGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKL-MGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDK 491 (742)
T ss_pred ccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 00 0135667776665555554 4445555556788888988765331
Q ss_pred --------------------------CC-----C----------------------------------------------
Q 018767 179 --------------------------GL-----S---------------------------------------------- 181 (350)
Q Consensus 179 --------------------------~~-----~---------------------------------------------- 181 (350)
|+ .
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 571 (742)
T TIGR01299 492 VAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEF 571 (742)
T ss_pred hhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhh
Confidence 00 0
Q ss_pred ------------------Cc------hHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccc
Q 018767 182 ------------------SG------KLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQ 237 (350)
Q Consensus 182 ------------------~~------~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
+. .....+..++.+++.+++|+++||+|||+++.++.++.+++.++++... +
T Consensus 572 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~---s- 647 (742)
T TIGR01299 572 QNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN---S- 647 (742)
T ss_pred hhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc---c-
Confidence 00 0224556688899999999999999999999888888887777664331 1
Q ss_pred ccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHH
Q 018767 238 NMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIY 317 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 317 (350)
....+...++.+++... ..+..+++++|.+|++.|+++.|+.+....+|++++|.+.+.+.+.....++.+.
T Consensus 648 -------~~~ll~~~~l~g~~~~~-~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~ 719 (742)
T TIGR01299 648 -------ESAMIALLCLFGGLSIA-AWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFA 719 (742)
T ss_pred -------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 12223333333333333 3344559999999999999999999999999999999999988776544556666
Q ss_pred HHhhHHHhhheeeecccCCCCC
Q 018767 318 SAFSVITVLFVAKFVPETKGKT 339 (350)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~ 339 (350)
+++.++++++. +++||++++.
T Consensus 720 a~~lll~~ll~-~~LPET~~~~ 740 (742)
T TIGR01299 720 SAALACGGLLA-LKLPDTRGQV 740 (742)
T ss_pred HHHHHHHHHHH-HhCCCCcccc
Confidence 66555554444 4569988764
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1e-40 Score=287.53 Aligned_cols=341 Identities=36% Similarity=0.633 Sum_probs=264.9
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----h---hhHHHhhchHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----P---WRILALTGLVP 74 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~---Wr~~f~~~~~~ 74 (350)
|++.+.++|+++|++.|+..+....++.|..|+++|++..++.+.++.+|.+++..++... + ||..+.+..++
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~ 180 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIP 180 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7899999999999999999999999999999999999999999999999999988776544 4 99999999999
Q ss_pred HHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccc-hhHHHHHH
Q 018767 75 CVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKY-IRSVIIGV 153 (350)
Q Consensus 75 ~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 153 (350)
+++.++...++||||+|+..++|.+|+++.+++.++.+.+.++..++.++ .++ .++.+.+++++++++. +++....+
T Consensus 181 ~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~~~~~~~~ 258 (451)
T PF00083_consen 181 SLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAE-KKE-SQESKASWRDLFRNKKYRKRLLIAL 258 (451)
T ss_pred cccccccccccccccceecccccccccccccccccccccccccccccccc-ccc-ccccceeeeeccccccccccccccc
Confidence 98887888899999999999999999999998866553222222111111 111 1111256777887654 45666666
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH-HH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT-SF 232 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~-~~ 232 (350)
.+..+....+.....+|.+.+.++.+.++.........+...++.+++..+.||+|||+.++.+..++.++.+.++. ..
T Consensus 259 ~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~ 338 (451)
T PF00083_consen 259 LLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFF 338 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 66666666677777888888888888777655556666778888888889999999999999998888877777651 11
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc-c
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS-S 311 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~ 311 (350)
...+.+ .+.....+....+....+..+..+..+.+..|.+|++.|+++.++....+++++++++.+...+.+..+ .
T Consensus 339 ~~~~~~---~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 415 (451)
T PF00083_consen 339 LGVSSS---SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGW 415 (451)
T ss_pred cccccc---cccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111110 011223333344455566667788888999999999999999999999999999999999988877644 7
Q ss_pred chhhHHHHhhHHHhhheeeecccCCCCCHHHHHHhh
Q 018767 312 GTFFIYSAFSVITVLFVAKFVPETKGKTLEQIQASI 347 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (350)
..+.++++++.+..++.++++|||++++.+|+++++
T Consensus 416 ~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 416 GVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 778888888888888999999999999999999864
No 7
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=6.1e-33 Score=242.46 Aligned_cols=325 Identities=19% Similarity=0.259 Sum_probs=228.3
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-hhhHHHhhchHHHHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-PWRILALTGLVPCVLLL 79 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-~Wr~~f~~~~~~~~~~~ 79 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ +||+.|++.+++.++..
T Consensus 178 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~ 257 (505)
T TIGR00898 178 PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFF 257 (505)
T ss_pred ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 47788999999999999999999999999999999999999999999999999999988776 89999999888888877
Q ss_pred HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchH-HHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHH
Q 018767 80 VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADIT-REAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVL 158 (350)
Q Consensus 80 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+..+++||+|+|+..+++.+++.+.+++..+.+.... ++..+.+...+.+++.++.+++++++++..+...+.....++
T Consensus 258 ~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 258 LLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred HHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 6778899999999999999998888877654332211 111111111111111223567888887776666555444443
Q ss_pred HHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccc
Q 018767 159 QQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQN 238 (350)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
.....++.... .....+.+. .......++..+++.++.+++.||+|||+.+.++.++.+++.+.+... ....
T Consensus 338 ~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~---~~~~ 409 (505)
T TIGR00898 338 TTAFSYYGLVL----DLGNLGGNI-YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFV---PVDL 409 (505)
T ss_pred HHHHHHHHHhc----cccccCCCh-HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc---CCCc
Confidence 32222222222 222233322 245556678888899999999999999999988887777766655332 1110
Q ss_pred cccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHH
Q 018767 239 MFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYS 318 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 318 (350)
.+.......+..++... ..+..+.+..|.+|++.|+++.|+.+....+|++++|.+.+ +.+.+....+.+++
T Consensus 410 ------~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~ 481 (505)
T TIGR00898 410 ------YFLRTALAVLGKFGITS-AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFG 481 (505)
T ss_pred ------hHHHHHHHHHHHHHHHH-HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHH
Confidence 12222222222223333 33444589999999999999999999999999999999998 55555566677777
Q ss_pred HhhHHHhhheeeecccCCCCCHHH
Q 018767 319 AFSVITVLFVAKFVPETKGKTLEQ 342 (350)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~ 342 (350)
+...+.++.. +++||+++++++|
T Consensus 482 ~~~~~~~~~~-~~lpet~~~~l~~ 504 (505)
T TIGR00898 482 GLALLAGILT-LFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHHHHH-HcCcCCCCCCCCC
Confidence 6666665544 5678998877653
No 8
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.7e-31 Score=231.44 Aligned_cols=338 Identities=38% Similarity=0.624 Sum_probs=237.2
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc---CC----chhhHHHhhchHHH
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG---SI----IPWRILALTGLVPC 75 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~---~~----~~Wr~~f~~~~~~~ 75 (350)
++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++ .. .+||+.|++.++..
T Consensus 127 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~ 206 (481)
T TIGR00879 127 VEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPA 206 (481)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999998 43 38999999977777
Q ss_pred HHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHH---HHHHHHHhccCCCcchhhhhhccc--chhHHH
Q 018767 76 VLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAA---EIQVYILTLRSLPKASIRDLFKSK--YIRSVI 150 (350)
Q Consensus 76 ~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 150 (350)
++.++..+++||+|++...+++.++.++..++....+.+..+..+ ..+.....+.+..+..+++.++.. ..++.+
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (481)
T TIGR00879 207 GLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLF 286 (481)
T ss_pred HHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHH
Confidence 777777788999999887777766665555554433222111111 101111111111111233333321 234445
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 151 IGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
+...+..+..........++.|.+.++.+.+... .......++.+++.++.|++.||+|||+.+..+..+..++.+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 366 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVL 366 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 5555555555555566778888888888887754 66667788889999999999999999999888877777666665
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
............ .......+....++..+++.+..+....++.|.+|++.|+++.++.+...++|++++|.+.+.+.+.
T Consensus 367 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 367 GILGASFVTGSS-KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred HHHhhcccCCcc-cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 432221111000 0001233334445555666666677768889999999999999999999999999999999998876
Q ss_pred -hccchhhHHHHhhHHHhhheeeecccCCCCCHH
Q 018767 309 -SSSGTFFIYSAFSVITVLFVAKFVPETKGKTLE 341 (350)
Q Consensus 309 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (350)
+....+++.++++++.+++.+++.+|+++++.+
T Consensus 446 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 446 IGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred cCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 555567777777777777777778888776654
No 9
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.8e-31 Score=207.50 Aligned_cols=324 Identities=21% Similarity=0.256 Sum_probs=234.3
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|+..+-.. ..+.+|.+....+.... ||||.......+..
T Consensus 164 pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~ 241 (528)
T KOG0253|consen 164 PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLM 241 (528)
T ss_pred CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHH
Confidence 6889999999999999999 899999999999999999877766 88888888887766543 99999888888888
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcc-----------hHHHHHH---HHHHHHhccCCCcchhhhhhc
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDAD-----------ITREAAE---IQVYILTLRSLPKASIRDLFK 142 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 142 (350)
+.....+++||||||+..+++++++.+.++++...|.. .+++++| ..+...+..++......+++.
T Consensus 242 ~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls 321 (528)
T KOG0253|consen 242 FAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS 321 (528)
T ss_pred HHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC
Confidence 88888899999999999999999999999988654321 1111111 111122223344556677777
Q ss_pred ccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhC--------------------CCCc--hHHHHHHHHHhhhHHhh
Q 018767 143 SKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAG--------------------LSSG--KLGTILYACVQVPITVV 200 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~--~~~~~~~~~~~~~~~~~ 200 (350)
.+.+|..+.....++...+. ++........+++... .+.. ..-..+..+..+.|.++
T Consensus 322 p~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLI 400 (528)
T KOG0253|consen 322 PKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLI 400 (528)
T ss_pred hHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhH
Confidence 66655555544444433333 2333222222222110 0111 14567788999999999
Q ss_pred HhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchh
Q 018767 201 GAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIK 280 (350)
Q Consensus 201 ~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 280 (350)
.+++.||+|||+.+....+++.+..+++... .. ........+..-++...++... |.|..|++|+..|
T Consensus 401 t~~iverlGRKkTMal~l~~f~iflfll~~c---~~--------rn~~tvllf~arafisg~fqva-YvYtPEVyPTavR 468 (528)
T KOG0253|consen 401 TGVIVERLGRKKTMALSLILFGIFLFLLTTC---KT--------RNAYTVLLFTARAFISGAFQVA-YVYTPEVYPTAVR 468 (528)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHh---cC--------cchhHHHHHHHHHHHhchheEE-EEecCcccchhhh
Confidence 9999999999999999888888877776332 22 1222333334444444444444 5999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhHHHhhheeeecccCCCCCH
Q 018767 281 GVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSVITVLFVAKFVPETKGKTL 340 (350)
Q Consensus 281 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (350)
+++.|.+....++|+++.|.++ ...+.....+..++.++++++++...++-.|+|+|+.
T Consensus 469 atgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 9999999999999999999998 5555566778888999998888888888889998863
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=231.47 Aligned_cols=299 Identities=19% Similarity=0.204 Sum_probs=188.8
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc----C--------CchhhHHHhhch
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG----S--------IIPWRILALTGL 72 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~----~--------~~~Wr~~f~~~~ 72 (350)
.++++|+++|++.|+.++...+++.|++|+++||++.++...+..+|..+++.+. . ..|||++|++.+
T Consensus 120 ~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~ 199 (490)
T PRK10642 120 LLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIAL 199 (490)
T ss_pred HHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHH
Confidence 3889999999999999999999999999999999999999988888887776443 2 248999999988
Q ss_pred HHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 73 VPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 73 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
+++++.+++...+||+|+|...+++.++.. . +..++.++.++++++++ +++.....
T Consensus 200 ~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------~-------------~~~~~~~~~~~~~~~~~-~~~~~~~~ 255 (490)
T PRK10642 200 PLGIIGLYLRHALEETPAFQQHVDKLEQGD----------R-------------EGLQDGPKVSFKEIATK-HWRSLLTC 255 (490)
T ss_pred HHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------c-------------ccccccccCCHHHHHHH-hHHHHHHH
Confidence 777766666778999998754322111100 0 00001123346666653 33333332
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
..... .....++....+.|.+++ ..+.+... .......++.+++.++.|+++||+|||+.+..+.++..+....+.
T Consensus 256 ~~~~~-~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 256 IGLVI-ATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 22222 222334556667777764 45766544 445566777888999999999999999988776654443332221
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS 309 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 309 (350)
... ...+ .........+.+.+.+...+... .+..|.+|++.|+++.|+.+....+++.++|.+.+++.+..
T Consensus 335 ~~~--~~~~------~~~~~~~~~~~g~~~~~~~g~~~-~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 335 ILI--NSNV------IGLIFAGLLMLAVILNCFTGVMA-STLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHH--hCCC------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 1111 12222233333333333333343 77889999999999999877767777889999999887753
Q ss_pred c--cchhhHHHHhhHHHhhheeeecccCCCC
Q 018767 310 S--SGTFFIYSAFSVITVLFVAKFVPETKGK 338 (350)
Q Consensus 310 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (350)
+ ....+...+..++ +++..++.||++++
T Consensus 406 ~~~~~~~~~~~~~~~i-~~~~~~~~pes~~~ 435 (490)
T PRK10642 406 QNLMMPAYYLMVVAVI-GLITGVTMKETANR 435 (490)
T ss_pred CCchHHHHHHHHHHHH-HHHHHHHhccccCC
Confidence 2 2233333333333 33333456877554
No 11
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=3.7e-28 Score=207.69 Aligned_cols=290 Identities=15% Similarity=0.086 Sum_probs=178.9
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC------------CchhhHHHhhch
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS------------IIPWRILALTGL 72 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------------~~~Wr~~f~~~~ 72 (350)
.++++|+++|++.|+.++....++.|++|+++|++..+..+.+..+|.+++..+.. ..|||++|++.+
T Consensus 127 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~ 206 (438)
T PRK09952 127 LLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSI 206 (438)
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHH
Confidence 58889999999999999999999999999999999999999999999988865432 348999999988
Q ss_pred HHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchh-hhhhcccchhHHHH
Q 018767 73 VPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASI-RDLFKSKYIRSVII 151 (350)
Q Consensus 73 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 151 (350)
++.++.+......||+|+|...+++.++ .+++.+. +.+++++..+..
T Consensus 207 ~~~l~~~~l~~~~~es~~~~~~~~~~~~------------------------------~~~~~~~~~~l~~~~~~~~~-- 254 (438)
T PRK09952 207 VLVLIALWVRNGMEESAEFEQQQHEQAA------------------------------AKKRIPVIEALLRHPGAFLK-- 254 (438)
T ss_pred HHHHHHHHHHHhCCCChhHHHHHhhccc------------------------------ccccCCHHHHHHHchHHHHH--
Confidence 8776666666678999876432211100 0001111 223333222211
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 152 GVSLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
....... .....+....+.|.+. ++.+.+... ......++..+++.++.|+++||+|||+.+..+.++..++...+
T Consensus 255 ~~~~~~~-~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~ 333 (438)
T PRK09952 255 IIALRLC-ELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPF 333 (438)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 1111222 2222334444555554 445666543 33444566677888899999999999998877665554433332
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHH-HHHHHHHHHHhHHHHh
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVN-WSGAWAVSYTFNFLMS 307 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~~~~~l~~ 307 (350)
..... ..+. .........+...+.+.. .+..++++.|.+|++.|+++.++.+... .+++.++|.+.+.+.+
T Consensus 334 ~~~~~-~~~~------~~~~~~~~~l~~~~~~~~-~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 334 FMALE-AQSI------FWIVFFSIMLANIAHDMV-VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHH-cCCh------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 1110 122222222223333333 3334588999999999999999976664 4899999999999987
Q ss_pred hh--ccchhhHHHHhhHHHhhheeeecccC
Q 018767 308 WS--SSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 308 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
.. .+.....+.++..+.+.+..+..+|+
T Consensus 406 ~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 406 YFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 42 23333333433344443333445553
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.96 E-value=1.5e-27 Score=203.94 Aligned_cols=282 Identities=17% Similarity=0.210 Sum_probs=173.4
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC------------CchhhHHHhhch
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS------------IIPWRILALTGL 72 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------------~~~Wr~~f~~~~ 72 (350)
.++++|+++|++.|+.++...+++.|++|+++|+++.++...+...|.++++.+.. ..|||++|++.+
T Consensus 126 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~ 205 (432)
T PRK10406 126 LLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGA 205 (432)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 58899999999999999999999999999999999999988888888777765432 348999999988
Q ss_pred HHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 73 VPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 73 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
+++++.+..+..+||+|++..++ ..++.+++++++++..+...+
T Consensus 206 ~~~ll~~~~~~~~~e~~~~~~~~-----------------------------------~~~~~~~~~l~~~~~~~~~~~- 249 (432)
T PRK10406 206 VLAVVALWLRRQLDETSQQETRA-----------------------------------LKEAGSLKGLWRNRRAFIMVL- 249 (432)
T ss_pred HHHHHHHHHHhcCCCCchHHHhh-----------------------------------hcccccHHHHHhhHHHHHHHH-
Confidence 88877766667788887431000 001124566666433222111
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
...+.....++.+..+.|.+++ +.+.+..+ .......+...++.++.|+++||++||+.+..+..+..+....+.
T Consensus 250 --~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 327 (432)
T PRK10406 250 --GFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPIL 327 (432)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 1122212223445566776654 46776544 445555666778888999999999999877665544333322221
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHH-HHHHHHHHhHHHHhh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWS-GAWAVSYTFNFLMSW 308 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~ 308 (350)
... ....+ ....+....+.....+. ..+..+.+..|.+|++.|+++.|+.+...++ .+...|.+.+.+.+.
T Consensus 328 ~~~-~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~ 399 (432)
T PRK10406 328 SAL-QNVSS------PYAAFGLVMCALLIVSF-YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI 399 (432)
T ss_pred HHH-HcCCc------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 111 11111 12111111111111111 2233457889999999999999999988665 344578888766444
Q ss_pred hccchhhHHHHhhHHHhhheeeec
Q 018767 309 SSSGTFFIYSAFSVITVLFVAKFV 332 (350)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~ 332 (350)
+.+.....+.+...+.+.+..+++
T Consensus 400 g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 400 GMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHh
Confidence 434444444434333333333333
No 13
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=8.2e-27 Score=204.21 Aligned_cols=332 Identities=22% Similarity=0.203 Sum_probs=229.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc--hhhHHHhhchHHHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII--PWRILALTGLVPCVLL 78 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~--~Wr~~f~~~~~~~~~~ 78 (350)
+|++.+++.|+++|++.++...++..++.|+.++++|+.+..+ ......|..+++.+++++ +||+.+++..++.++.
T Consensus 169 ~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~ 247 (521)
T KOG0255|consen 169 PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLF 247 (521)
T ss_pred CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999 666666666666666655 8999999999999987
Q ss_pred HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCC---cchHHHHHHH-H-HHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 79 LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKD---ADITREAAEI-Q-VYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 79 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
++.+++.||||+|+..+++.+++.+.++++.+.+ .+..+...+. . ........+++..+.++++.+..++..+..
T Consensus 248 ~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~ 327 (521)
T KOG0255|consen 248 LLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYL 327 (521)
T ss_pred HHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHH
Confidence 7777777899999999999999999999886543 2222221111 1 111112222335678888876444444434
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
.+..+.....++.. +......|.+. .......+.....+....+...|++|||.....+..+..++++..++...
T Consensus 328 ~~~~~~~~~~y~gl----~~~~~~lg~~~-~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~ 402 (521)
T KOG0255|consen 328 LFIWFVFSLVYYGL----SLNVSGLGGNI-YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPD 402 (521)
T ss_pred HHHHHHHhHHHHhh----hhhhhhcCchH-HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 43332211111111 11222222222 14455555577778888899999999999999999998888888866544
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccch
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGT 313 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 313 (350)
... .+.......+..++.+.++... +.+..|++|+..|..+.+.......+|++++|.+............
T Consensus 403 ~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~ 473 (521)
T KOG0255|consen 403 DLG--------GWLHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLG 473 (521)
T ss_pred cch--------hHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccch
Confidence 322 1123333334444445555555 5999999999999999999999999999999999865544322223
Q ss_pred hhHHHHhhHHHhhheeeecccCCCCCHHHHHHhh
Q 018767 314 FFIYSAFSVITVLFVAKFVPETKGKTLEQIQASI 347 (350)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (350)
...++....+.+.+...++||++++.+.+..++.
T Consensus 474 ~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~ 507 (521)
T KOG0255|consen 474 LILFGWLALLLGLLSLLLLPETKGKPLPGTLLDA 507 (521)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHH
Confidence 3334666666666666889999998875544443
No 14
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5e-27 Score=189.47 Aligned_cols=276 Identities=17% Similarity=0.158 Sum_probs=192.5
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+||+.++++|++.|+..|.+++...++..|..|++||++++++...+..++.++|.+++.++ |||+.|++.+..++
T Consensus 99 p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~l 178 (394)
T COG2814 99 PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLAL 178 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999888888877766 89999999988888
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+.+ ..+..+| |+.. .++++.+..+..+.+|++..+.......+
T Consensus 179 l~~~~~~~~lP--~~~~----------------------------------~~~~~~~~~~~~~~l~~p~v~~~l~~t~l 222 (394)
T COG2814 179 LALLLLWKLLP--PSEI----------------------------------SGSLPGPLRTLLRLLRRPGVLLGLLATFL 222 (394)
T ss_pred HHHHHHHHhCC--CccC----------------------------------CCCCCcchhHHHHHhcCchHHHHHHHHHH
Confidence 855 4566688 2100 00011112234556776655555444444
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
....+ +..++|.-|.+.+..|++.+. +....++++.++|+.++|++.|| +.|+.+.....+..+....+....
T Consensus 223 ~~~g~---F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~- 297 (394)
T COG2814 223 FMTGH---FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG- 297 (394)
T ss_pred HHcch---hhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-
Confidence 33332 345556666666677888766 88888999999999999999999 888888777666666666653322
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccch
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGT 313 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 313 (350)
++ .+..+....+.+........... ....+ .-++.+..+.+++....++|..+|..++|.+.++.+...
T Consensus 298 --~~-------~~~~~~~~~~wg~a~~~~~~~~~-~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~ 366 (394)
T COG2814 298 --AS-------PALALALLFLWGFAFSPALQGLQ-TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAA 366 (394)
T ss_pred --ch-------HHHHHHHHHHHHHHhhhhhhHHH-HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Confidence 11 22333333332222222222222 34444 235678999999999999999999999999999855555
Q ss_pred hhHHHHhhHHHhhhe
Q 018767 314 FFIYSAFSVITVLFV 328 (350)
Q Consensus 314 ~~~~~~~~~~~~~~~ 328 (350)
....+++..+.+...
T Consensus 367 ~~~~~a~l~~~a~~~ 381 (394)
T COG2814 367 TGWVGAALLLLALLL 381 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555554444444433
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=4.8e-27 Score=201.24 Aligned_cols=274 Identities=18% Similarity=0.183 Sum_probs=179.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC----chhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI----IPWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~----~~Wr~~f~~~~~~~~~ 77 (350)
|++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+... .+||+.|++..+..++
T Consensus 105 ~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~ 184 (426)
T PRK12307 105 GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL 184 (426)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999998877654 3899999886554444
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
.+......||++++..++.+. ++++.+ ...+..+.++++.++++..+.........+
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~------------~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (426)
T PRK12307 185 VIYIRARAPESKEWEEAKLSG------------KGKHSQ-----------SAWSVFSLSMKGLFNRAQFPLTLCVFIVLF 241 (426)
T ss_pred HHHHHHHCCCChHHHHhhhhc------------cccccc-----------cchhhhhHHHHHHHhhchHHHHHHHHHHHH
Confidence 444444467766442211000 000000 000001224566777655444333222222
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhc
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLK 235 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
..+.....+..+.|.+.++.+.+... .......++.+++.++.|++.||++||+.+..+..+..+....... ..
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~---~~ 317 (426)
T PRK12307 242 -SIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR---IP 317 (426)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH---Hc
Confidence 22222233455677777777776554 5556677889999999999999999999887776665544433321 11
Q ss_pred ccccccCchhHHHHHHHHHHHHH-HhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 236 GQNMFLDWVPVLAVGGILIYIAF-FSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
.. ... ......++.. ...+..+....++.|.+|++.|+++.|+.+....+++.++|.+.+.+.+..+
T Consensus 318 ~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 318 QD-------NYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred cc-------cHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 11 111 1112222222 2222333444778999999999999999999999999999999999988744
No 16
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=7e-28 Score=191.97 Aligned_cols=301 Identities=18% Similarity=0.229 Sum_probs=199.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc--CCc----hhhHHHhhchHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG--SII----PWRILALTGLVPC 75 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~--~~~----~Wr~~f~~~~~~~ 75 (350)
+...+.++-+++|..+|.-+|.+...++.|++++|||+..++++++.++|..+.+++. +.+ +||..|++.++++
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiia 195 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIA 195 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 4567888999999999999999999999999999999999999999999999998887 544 8999999998888
Q ss_pred HH-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhh-----hhcccchhHH
Q 018767 76 VL-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRD-----LFKSKYIRSV 149 (350)
Q Consensus 76 ~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 149 (350)
++ +++.++..+|+|+-.- -+..|+ .++ ++.+.+ +++++.+..+.++ +++||..+
T Consensus 196 iival~~~~~~rd~Pqs~G-LP~ie~-------~~~---------d~~e~~-~~~~~~~~ls~~~i~~~YVL~Nk~iW-- 255 (448)
T COG2271 196 IIVALILLFLLRDRPQSEG-LPPIEE-------YRG---------DPLEIY-EEEKENEGLTAWQIFVKYVLKNKLIW-- 255 (448)
T ss_pred HHHHHHHHHHhCCCccccC-CCCHHH-------hhc---------Cchhhh-hhhccCCCccHHHHHHHHHHcChHHH--
Confidence 77 6677778899984210 000000 000 000000 1111111133333 34544433
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhccc--CCceeehhhhHHHHHH
Q 018767 150 IIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKS--GRRPLIMISAAGTFLG 224 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~--grr~~~~~~~~~~~~~ 224 (350)
.+.+.....+..-+.+..+.|.++. ..+++... .....+-.++++|++++|+++||+ |||....+.+.+....
T Consensus 256 --~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~ 333 (448)
T COG2271 256 --LLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITA 333 (448)
T ss_pred --HHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 3333333333345677778887654 46777655 778888999999999999999996 6666654433333322
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHH-HHHHHHHHhH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWS-GAWAVSYTFN 303 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~ 303 (350)
++.. ....++. ........+...+++..+..-+.-..+.|..|++..|++.|+...+.++ |+..+....+
T Consensus 334 ~~~~---~w~~~~~------~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 334 SLVL---YWLAPNG------SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHH---HHcCCCc------cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 2222 2222211 1233333333333443343334446788999999999999999999999 9999999999
Q ss_pred HHHhh-hccchhhHHHHhhHHHhhheeeecc
Q 018767 304 FLMSW-SSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 304 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
++.|. ++...|.++.+.++++.++.....+
T Consensus 405 ~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 405 YIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred eeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 98887 5566666666666666555544444
No 17
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.8e-28 Score=194.61 Aligned_cols=330 Identities=21% Similarity=0.264 Sum_probs=230.5
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-------------------hh
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-------------------PW 64 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-------------------~W 64 (350)
.++...|++.|+|.|+-+|.+.++.+|...+++||...+.+.+....|.+.|.+++..+ -|
T Consensus 145 ~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vW 224 (538)
T KOG0252|consen 145 MTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVW 224 (538)
T ss_pred hHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHH
Confidence 46788999999999999999999999999999999999888777777777766555433 29
Q ss_pred hHHHhhchHHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCc---chhhhhh
Q 018767 65 RILALTGLVPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPK---ASIRDLF 141 (350)
Q Consensus 65 r~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 141 (350)
|..|.+++++.+..++.++.+|||++|.....++-+ ...++..+.... +.++.+.. +...+..+ ..+...+
T Consensus 225 Rl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~--~a~~d~~k~~~~---~~~~~~~~-~~~~~~~~~~~~~F~~~f 298 (538)
T KOG0252|consen 225 RIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLK--QAAGDMKKVLSV---DIEAESTA-ESDVPPPSNSFGLFSRLF 298 (538)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHh--hhhhcccccccc---ccchhhcc-ccCCCCcccccchHHHHH
Confidence 999999999999999999999999998633332211 111222111111 00000000 11111111 1233333
Q ss_pred cccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch-----------HHHHHHHHHhhhHHhhHhhhhcccCC
Q 018767 142 KSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK-----------LGTILYACVQVPITVVGAFLMDKSGR 210 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~l~d~~gr 210 (350)
..++ -+.++.....++..-..++....+...+++..+..+.. ....+..+..++|.++...++|++||
T Consensus 299 ~~~h-g~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGR 377 (538)
T KOG0252|consen 299 LRWH-GKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGR 377 (538)
T ss_pred HHHH-HHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhh
Confidence 3332 24444555555555555677788888888877766544 12334445566788889999999999
Q ss_pred ceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHH
Q 018767 211 RPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLV 290 (350)
Q Consensus 211 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 290 (350)
|+..+.+++++.+..+.++..+..... .....+...+..++...+.......+.+|.+|++.|++..|+...+
T Consensus 378 k~iq~~GF~~~~i~~~~~~~~y~~~~~-------~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 378 KYIQLMGFFIMTIFFFVIAGPYNQLEN-------TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAAS 450 (538)
T ss_pred HHHHHhhHHHHHHHHHHHcCCcccccc-------cCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHh
Confidence 999999999999888887655442111 2333445556666777788777789999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHh-----h-hccchhhHHHHhhHHHhhheeeecccCCCCCHHHHHHhhh
Q 018767 291 NWSGAWAVSYTFNFLMS-----W-SSSGTFFIYSAFSVITVLFVAKFVPETKGKTLEQIQASIN 348 (350)
Q Consensus 291 ~~~g~~~~~~~~~~l~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (350)
+-.|++++.....++.+ . +..+.+++++.++.+..+.. +++||+++|++||++++.+
T Consensus 451 GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 451 GKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGKSLEEISNEEE 513 (538)
T ss_pred ccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeecccccCHHHhcChhh
Confidence 99999999999999988 3 33455666776666655544 6677999999998865543
No 18
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=6e-26 Score=194.27 Aligned_cols=262 Identities=20% Similarity=0.230 Sum_probs=159.6
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC------------CchhhHHHhhch
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS------------IIPWRILALTGL 72 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------------~~~Wr~~f~~~~ 72 (350)
.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.++. ..|||++|++..
T Consensus 119 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 119 LVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 46899999999999999999999999999999999999988877766665554443 248999999865
Q ss_pred HHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 73 VPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 73 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
+...+........||++++..+++ +.+.+..+++..++ ++....
T Consensus 199 ~~~~~~~~~~~~~~e~~~~~~~~~---------------------------------~~~~~~~~~~~~~~---~~~~~~ 242 (434)
T PRK15075 199 LIVPFIFLIRRSLEETEEFLARKH---------------------------------RPSMREIFRSLAAN---WRIVLA 242 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHhhh---------------------------------ccccccHHHHHHHh---HHHHHH
Confidence 544333333334455432210000 00001112222221 122222
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
.....+.....++....+.|.++++ .+.+..+ .......++.+++.++.|+++||+|||+.+..+..+..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~- 321 (434)
T PRK15075 243 GMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPA- 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH-
Confidence 2222222233355667778887765 6777655 55667778888999999999999999998776544433221111
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHH-HHHHHHHHHhHHHHhh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNW-SGAWAVSYTFNFLMSW 308 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~~~ 308 (350)
......... .........+...+.+. ..+..+.+..|.+|++.|+++.++.+.... +++.++|.+.+.+.+.
T Consensus 322 ~~~~~~~~~------~~~~~~~~~~~~~~~g~-~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 322 LSWLVAAPS------FARMLAVELWLSFLYGS-YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHHHHcCCc------hHHHHHHHHHHHHHHHH-HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 111111110 11111212222223332 233334788999999999999999766555 4588899999999887
Q ss_pred hc
Q 018767 309 SS 310 (350)
Q Consensus 309 ~~ 310 (350)
.+
T Consensus 395 ~g 396 (434)
T PRK15075 395 TG 396 (434)
T ss_pred cC
Confidence 43
No 19
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=1.9e-26 Score=196.65 Aligned_cols=300 Identities=13% Similarity=0.049 Sum_probs=205.4
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
+++.+++.|+++|++.+...+...+++.|+.|+++|+++.++......+|..+++.+++.+ +||+.|++.++..++
T Consensus 109 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~ 188 (417)
T PRK10489 109 SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFI 188 (417)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4567889999999998888888899999999999999999999999999999999988765 899999888777777
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
..+....+||+++.. +++. +. .++ ....++..++++..+...+...+..
T Consensus 189 ~~~~~~~l~~~~~~~--~~~~---------------~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (417)
T PRK10489 189 TLLPLLRLPALPPPP--QPRE---------------HP---LRS-----------LLAGFRFLLASPVVGGIALLGGLLT 237 (417)
T ss_pred HHHHHHhCCCCCCCC--cccc---------------cc---hHH-----------HHHHHHHHHcChHHHHHHHHHHHHH
Confidence 666666777754210 0000 00 000 0112334455444333332222111
Q ss_pred HHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 158 LQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
. ......+.|.+.++ .+.+... .......++.+++.++.+++.||.++++.+..+..+..++.+.+...
T Consensus 238 ~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--- 309 (417)
T PRK10489 238 M-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--- 309 (417)
T ss_pred H-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc---
Confidence 1 12334456666666 6776654 56667788899999999999999877777777666665555443221
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccch
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGT 313 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~ 313 (350)
++ .+.......+.+.+.+. ..+...+++.|..|++.|+++.|+.+....+|..++|.+.|.+.+. +....
T Consensus 310 ~~--------~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~ 380 (417)
T PRK10489 310 PM--------WILAVLCLALFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVAS 380 (417)
T ss_pred ch--------HHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhH
Confidence 11 12222333333332222 2334447889999999999999999999999999999999999987 44556
Q ss_pred hhHHHHhhHHHhhheeeecccCCCCCHHHHHHhhhc
Q 018767 314 FFIYSAFSVITVLFVAKFVPETKGKTLEQIQASINK 349 (350)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (350)
+...+++..+.+++.....+++|+++++|++++..+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (417)
T PRK10489 381 ASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDASD 416 (417)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 666777767767777777888888888888877654
No 20
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=1.3e-26 Score=197.29 Aligned_cols=264 Identities=19% Similarity=0.227 Sum_probs=177.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.++..+ +||+.|++.++..+
T Consensus 101 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (406)
T PRK11551 101 WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPL 180 (406)
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 36778899999999999999999999999999999999999999999999999998887543 89999988776555
Q ss_pred HH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+. .+...++||+|++..++++.++ ++...+..++++..++... ...
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~-~~~ 227 (406)
T PRK11551 181 LLVPLLMRWLPESRAFAQAAGAGKQ--------------------------------RAPVLRALFGEGRATATLL-LWI 227 (406)
T ss_pred HHHHHHHHhCCCChhHHhccCcchh--------------------------------hhhhHHHHhhhhhhhHHHH-HHH
Confidence 53 4455668998764322111000 0000111111111111111 111
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
..+......+....+.|.+.++.+.+... .......++.+++.++.|++.||+|||+.+..+.....++...+. .
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~ 304 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA---A 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---h
Confidence 11121222344555677777777877655 666777888999999999999999999988765554444433331 1
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS 309 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 309 (350)
.++ .+.......+.+.+. .+..+...++..|.+|++.|+++.|+.+....+|..++|.+.|.+.+..
T Consensus 305 ~~~--------~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 305 APS--------FAGMLLAGFAAGLFV-VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred cCc--------HHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 111 222222222233222 2333445588999999999999999999999999999999999998864
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=1.1e-26 Score=198.54 Aligned_cols=304 Identities=16% Similarity=0.105 Sum_probs=181.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+..+|..+++.+.+.+ |||+.|++.+++.+
T Consensus 109 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~ 188 (434)
T PRK11663 109 SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAI 188 (434)
T ss_pred hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999998877654 99999998877665
Q ss_pred H-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhh-----hhcccchhHHH
Q 018767 77 L-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRD-----LFKSKYIRSVI 150 (350)
Q Consensus 77 ~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 150 (350)
+ .++..+++||+|++...+...++ +++.++. .+ +++..+.+.++ .++++..+..
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~-----------~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (434)
T PRK11663 189 VVGLFLCWRLRDKPQAMGLPSVGEW-----------RHDALEL---AQ-----QQEGAGLSRKEILTKYVLLNPYIWLL- 248 (434)
T ss_pred HHHHHHHHHcCCCHhhcCCCCcccc-----------ccccccc---ch-----hccccCCChhhhHHHHHhcChHHHHH-
Confidence 5 44455667888753211100000 0000000 00 00000111222 2333322222
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC--Cceeeh-hhhHHHHHH
Q 018767 151 IGVSLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSG--RRPLIM-ISAAGTFLG 224 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g--rr~~~~-~~~~~~~~~ 224 (350)
.+..+........+..+.|.++ ++.|.+..+ .......++.+++.++.|+++||+. +|+... .......+.
T Consensus 249 ---~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 249 ---SFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 2222222222345556777766 456777655 5666778889999999999999983 333322 211111111
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
...+.. ....+ ...........+ +...+........+.|.+|++.|+++.|+.+...++|++++|.+.|.
T Consensus 326 ~~~~~~---~~~~~------~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~ 395 (434)
T PRK11663 326 VGSLWL---MPFAS------YVMQAACFFTIG-FFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAK 395 (434)
T ss_pred HHHHHH---ccccc------HHHHHHHHHHHH-HHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence 111111 11110 111111111111 11222222223567899999999999999999999999999999999
Q ss_pred HHhh-hccchhhHHHHhhHHHhhheeeecccCCC
Q 018767 305 LMSW-SSSGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 305 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
+.+. ++...+...+++..+.++..+...+++++
T Consensus 396 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 396 VLEIWHWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 9987 44445555555555555544444444433
No 22
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.95 E-value=1.3e-26 Score=192.55 Aligned_cols=275 Identities=13% Similarity=0.054 Sum_probs=174.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
|++.++++|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.+++++++..+ |||+.|++.++++++
T Consensus 78 ~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAA 156 (368)
T ss_pred cHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 678899999999999985 566667779999999999999999999999999998887766 999999997776665
Q ss_pred -HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 78 -LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 78 -~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
.++.++++||+|++.. +. .+ .+ + ...+++++++++..+.... .
T Consensus 157 ~~~~~~~~lp~~p~~~~---~~--------------~~--~~--~-----------~~~~~~~ll~~~~~~~~~~----~ 200 (368)
T TIGR00903 157 GIILVLAALPALPFQAA---EG--------------FG--FK--D-----------AVKEFGALAGRKDLWIIGA----I 200 (368)
T ss_pred HHHHHHHHcCCCCCCCC---CC--------------cc--hH--H-----------HHHHHHHHHcChhHHHHHH----H
Confidence 4556677899885411 00 00 00 0 0013567777655443333 3
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCc---eeehh-hhHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRR---PLIMI-SAAGTFLGCFLAGTSF 232 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr---~~~~~-~~~~~~~~~~~~~~~~ 232 (350)
.++....++.+..|.|.++++.+++... .....+....+.+..++++||..|| +.... ......+....+ .
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~~g~s~~~--~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~---~ 275 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRPAGLEDIA--GDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLAL---A 275 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChHH--HHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH---H
Confidence 3333334556677899988887766432 2222333333444457888887654 22221 222222222121 1
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSG 312 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 312 (350)
...+ ....+....+.+ ++.....+..+++..|.+|++.|+++.|+.+..+++++..+|.+.+.+.. +...
T Consensus 276 ~~~~--------~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~ 345 (368)
T TIGR00903 276 FELN--------RLALFAFIGIAG-LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEA 345 (368)
T ss_pred Hccc--------cHHHHHHHHHHH-HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHH
Confidence 1111 122222222222 22333334455899999999999999999999999999999999987773 3345
Q ss_pred hhhHHHHhhHHHhhhe
Q 018767 313 TFFIYSAFSVITVLFV 328 (350)
Q Consensus 313 ~~~~~~~~~~~~~~~~ 328 (350)
.+..+++...+.++..
T Consensus 346 ~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 346 YFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5666666655555544
No 23
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=4.5e-25 Score=188.08 Aligned_cols=285 Identities=17% Similarity=0.130 Sum_probs=179.1
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----h--hhHHHhhchHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----P--WRILALTGLVP 74 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~--Wr~~f~~~~~~ 74 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.++..+ + ||+.|++.+++
T Consensus 98 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~ 177 (405)
T TIGR00891 98 PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILP 177 (405)
T ss_pred ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999887654 4 99999987777
Q ss_pred HHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHH-HH
Q 018767 75 CVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVII-GV 153 (350)
Q Consensus 75 ~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 153 (350)
.++.++....+||++++..++++.++.++..++..+++..... ..++.....++..+ ..+.... ..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~ 244 (405)
T TIGR00891 178 IIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIAN-----------IVMTLAAAMVQSAG--KRWPTFVYLV 244 (405)
T ss_pred HHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhh-----------hhhhhhHHhhhhhh--hhhHHHHHHH
Confidence 6666666777899876543322221111111111110000000 00000001111111 1111111 11
Q ss_pred HHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
....+.... ......+.|.+. ++.+.+..+ .......++.+++.++.+++.||+|||+.+..+.....+......
T Consensus 245 ~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~- 322 (405)
T TIGR00891 245 VLVLFANLY-SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVF- 322 (405)
T ss_pred HHHHHHHHH-HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHH-
Confidence 111111111 223334445444 456777655 566777888999999999999999999988776655433222211
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
.. .. + .+.......+...+ ..+..+....++.|.+|++.|+++.|+.+....+|+.++|.+.|.+.+..+
T Consensus 323 -~~-~~-~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 323 -AI-GA-N------VAVLGLGLFFQQML-VQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred -Hh-CC-c------hHHHHHHHHHHHHH-HccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11 11 1 12222222222222 233334445888999999999999999999999999999999999998744
No 24
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.94 E-value=4e-26 Score=193.64 Aligned_cols=284 Identities=13% Similarity=0.118 Sum_probs=174.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC----------chhhHHHhh
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI----------IPWRILALT 70 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~----------~~Wr~~f~~ 70 (350)
+|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++. .|||+.|++
T Consensus 94 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~ 173 (412)
T TIGR02332 94 TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLL 173 (412)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHH
Confidence 4678899999999999999999999999999999999999999999999999998877643 389999999
Q ss_pred chHHHHH-HHHHHhccCCChHH---HHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccch
Q 018767 71 GLVPCVL-LLVGLCFVPESPRW---LAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYI 146 (350)
Q Consensus 71 ~~~~~~~-~~~~~~~~~esp~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (350)
.+++.++ ..+.++++||+|+. +.+ ++.+...+..+.++.+.++... ..++.+...+..++++++ +.
T Consensus 174 ~~~~~l~~~~~~~~~~~~~p~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~- 243 (412)
T TIGR02332 174 EGFPSVILGVMTWFWLDDSPDKAKWLDE----EDKKALKEMIDNDQLTLEQPEG----AFAHAAMPQRSMLREIFT-PA- 243 (412)
T ss_pred HHHHHHHHHHHHhhccCCCcccCCCCCH----HHHHHHHHHHHhcccccccccc----ccccccccHHHHHHHhcC-hH-
Confidence 8777766 45566778998842 111 1111111111111000000000 000000000112333332 21
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHh--CCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceee-hhhhHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQA--GLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLI-MISAAGT 221 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~-~~~~~~~ 221 (350)
++......++.....+.+..+.|.++++. +.+... .......++.+++.++.|+++||++||+.. .......
T Consensus 244 ---~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 244 ---IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFA 320 (412)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHH
Confidence 22233333333344566777888888775 344333 567778888999999999999999987653 3333233
Q ss_pred HHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHH
Q 018767 222 FLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYT 301 (350)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 301 (350)
.++. .+. ... . + .............+. ....+..+....|.+|++.|+++.|+.+...++|++++|.+
T Consensus 321 ~~~~-~~~--~~~-~-~------~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~ 388 (412)
T TIGR02332 321 AAGW-LLA--SAT-D-H------NLIQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFL 388 (412)
T ss_pred HHHH-HHH--Hhc-C-C------HHHHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 2222 111 111 1 1 111111111111111 11223333556788999999999999999999999999999
Q ss_pred hHHHHhhh
Q 018767 302 FNFLMSWS 309 (350)
Q Consensus 302 ~~~l~~~~ 309 (350)
.+.+.+..
T Consensus 389 ~g~i~~~~ 396 (412)
T TIGR02332 389 IGILKDAT 396 (412)
T ss_pred cccccccC
Confidence 99998863
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.94 E-value=1.6e-26 Score=199.59 Aligned_cols=279 Identities=13% Similarity=0.057 Sum_probs=170.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-------hhhHHHhhchH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-------PWRILALTGLV 73 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-------~Wr~~f~~~~~ 73 (350)
+|++.++++|+++|++.+...+...+++.||+|+++||+++++...+.++|.++++.+...+ +||..|.+.++
T Consensus 120 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~ 199 (467)
T PRK09556 120 VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSI 199 (467)
T ss_pred chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999988776422 59998888776
Q ss_pred HHHH-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchh-hhhhcccchhHHHH
Q 018767 74 PCVL-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASI-RDLFKSKYIRSVII 151 (350)
Q Consensus 74 ~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 151 (350)
++++ +++.+++.+|+|+... ..++ ++. .. +..+ ++ .+ ..+.++......+ +..++++..+..
T Consensus 200 ~~~~~~i~~~~~~~~~p~~~~---~~~~-~~~---~~-~~~~--~~---~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-- 263 (467)
T PRK09556 200 IALIIGFIGLRYGSDSPEELG---WGKA-EEI---FG-EPIS--EE---DK-ETESTDMTKWQIFVEYVLKNPVIWLL-- 263 (467)
T ss_pred HHHHHHHHHHHhCCCChhhcC---CCCh-hhc---cc-Cccc--hh---hh-ccccccCcHHHHHHHHHHcChHHHHH--
Confidence 6665 4445556677764211 0000 000 00 0000 00 00 0000000000111 124454433322
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 152 GVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
.+..++..........+.|.+++ +.|.+..+ .......++.+++.+++|+++||++||+..........++...+
T Consensus 264 --~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 264 --CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 22222222234456677786664 57777655 55666778899999999999999999987665443333322221
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHH-HHHHHHHHhHHHHh
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWS-GAWAVSYTFNFLMS 307 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~ 307 (350)
.. . ..++ ...........+.+ ..+........+.|.+|++.||++.|+.+...++ |.+++|.+.|.+.+
T Consensus 342 ~~--~-~~~~------~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 342 VY--Q-HATS------EYMYLASLFALGFL-VFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HH--H-hcCc------HHHHHHHHHHHHHH-HhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 11 1 1111 22222222222221 1121112225677999999999999999999997 77999999999998
No 26
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2e-25 Score=188.74 Aligned_cols=274 Identities=15% Similarity=0.089 Sum_probs=177.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+ |||+.|++.++..+
T Consensus 95 ~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 174 (390)
T PRK03545 95 WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGAL 174 (390)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHH
Confidence 47889999999999999988999999999999999999999999999999999999888654 99999999887776
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+.. .....+||.|+ ++. .+..+.++.++++..+.......+
T Consensus 175 l~~~~~~~~~~~~~~-----~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
T PRK03545 175 ITLLLLIKLLPLLPS-----EHS---------------------------------GSLKSLPLLFRRPALVSLYLLTVV 216 (390)
T ss_pred HHHHHHHHhCCCCCC-----CCc---------------------------------chHHHHHHHHhCcHHHHHHHHHHH
Confidence 644 33445666542 000 001123456666544433332222
Q ss_pred HHHHHhhcchhhhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
.... ......+.+.+ .+..+.+... .......++.++++++.|++.||++||.. ..+..+..++...+..
T Consensus 217 ~~~~----~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~-- 289 (390)
T PRK03545 217 VVTA----HFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLP-- 289 (390)
T ss_pred HHHH----HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHH--
Confidence 2221 12222334434 3445766655 55667778899999999999999998764 3333333333222211
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh-cc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS-SS 311 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~ 311 (350)
..++ .+.......+.+.+.. ...+.....+.|..| +.|+++.|+.+...++|..+||.+.|.+.+.. ..
T Consensus 290 ~~~~--------~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~ 359 (390)
T PRK03545 290 AANS--------EWHLSVLSIFWGIAIM-CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLS 359 (390)
T ss_pred Hhch--------HHHHHHHHHHHHHHHh-cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh
Confidence 1111 2222333333333332 223333366777766 57899999999999999999999999999874 44
Q ss_pred chhhHHHHhhHHHhhhee
Q 018767 312 GTFFIYSAFSVITVLFVA 329 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~ 329 (350)
..+...+.+..+..+..+
T Consensus 360 ~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 360 SIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555555544444443
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=8.2e-25 Score=188.14 Aligned_cols=295 Identities=13% Similarity=0.160 Sum_probs=170.8
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHH-HHHHhcC----CchhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSS-VAYIIGS----IIPWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~----~~~Wr~~f~~~~~~~~ 76 (350)
+++.+++.|+++|++.+...+.....+.|++|+++|++++++.+.+..+|.. .+++++. ..+||+.|++.+++.+
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred cHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4567788999999999998888888999999999999999999999988864 4454322 2289999998877666
Q ss_pred H-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhh-----hhcccchhHHH
Q 018767 77 L-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRD-----LFKSKYIRSVI 150 (350)
Q Consensus 77 ~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 150 (350)
+ .++..+++||+|+....+ +.++.+ .+.. +. .++++.++.+.++ .++++..+...
T Consensus 199 ~~~~l~~~~~~~~~~~~~~~-~~~~~~-------~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (452)
T PRK11273 199 LVALFAFAMMRDTPQSCGLP-PIEEYK-------NDYP-------DD----YNEKHEQELTAKQIFMQYVLPNKLLWYIA 259 (452)
T ss_pred HHHHHHHHHccCCHhhcCCC-Chhhhh-------hccc-------cc----cccccCCCccHHHHHHHHHHcChHHHHHH
Confidence 6 455567789887531100 111100 0000 00 0000001111222 34443333322
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC--Cceeehh-hhHHHHHH
Q 018767 151 IGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSG--RRPLIMI-SAAGTFLG 224 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g--rr~~~~~-~~~~~~~~ 224 (350)
+...+.. ...+....+.|.++++ .+++... ....+..++.+++.++.|+++||++ ||..... ...+..++
T Consensus 260 l~~~~~~----~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~ 335 (452)
T PRK11273 260 IANVFVY----LLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 335 (452)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 2222222 2234456677777765 5666544 5556677888889999999999994 4443221 11222222
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHH-HHHHhH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWA-VSYTFN 303 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~~~~ 303 (350)
...+ ......+ ...........+... .+.......+..|.+|++.||++.|+.+...++|+.+ +|.+.|
T Consensus 336 ~~~~---~~~~~~~------~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 336 TIVY---WLNPAGN------PTVDMACMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHH---HHhcccC------hHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 2111 1111111 122222222222211 1111222256779999999999999999999998765 799999
Q ss_pred HHHhh-hccchhhHHHHhhHHHhhhee
Q 018767 304 FLMSW-SSSGTFFIYSAFSVITVLFVA 329 (350)
Q Consensus 304 ~l~~~-~~~~~~~~~~~~~~~~~~~~~ 329 (350)
.+.+. ++...+.+.++.++++.+...
T Consensus 406 ~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 406 YTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99887 444555555555555444443
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=7.6e-25 Score=186.27 Aligned_cols=301 Identities=18% Similarity=0.194 Sum_probs=184.2
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
|++.++++|+++|++.+...+....++.|++|+++|++.+++......+|..+++.+++.+ +||+.|++.++..++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 6778999999999999999999999999999999999999999999999999999888754 899999988777666
Q ss_pred HH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 78 LL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 78 ~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
.. +.....||+|+.. +...++.++...+ ... .+.+.+++++.++.+.++.++++..+.....
T Consensus 161 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKA--KWLTEEEKYIVVG--GLL---------AEQQGKGPSTPKKYQIKELLKDRRVWGLALG---- 223 (399)
T ss_pred HHHHhhheecCCCCcc--ccCCHHHHhhcch--hhc---------cccccccccCCCccchHHHhcCHHHHHHHHH----
Confidence 44 4445567765311 0001110000000 000 0000011112233345566665443333222
Q ss_pred HHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhh-hHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMIS-AAGTFLGCFLAGTSF 232 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~-~~~~~~~~~~~~~~~ 232 (350)
.+...........+.|.+.+ ..+.+..+ .......++.+++.++.|++.||++||+..... .....++.+......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 22222223445556666554 45665544 666777888899999999999999999632221 111112211111111
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc--
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS-- 310 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-- 310 (350)
....... ............ +...+..+..+++..|.+|++.|+++.|+.+.+..+|+.++|.+.|.+.+..+
T Consensus 304 ~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~ 377 (399)
T TIGR00893 304 FATNYVN-----IPYAALALVALG-FFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF 377 (399)
T ss_pred HHhccch-----hHHHHHHHHHHH-HhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch
Confidence 1111000 111222222222 22333456667999999999999999999999999999999999999988743
Q ss_pred cchhhHHHHhhHHHh
Q 018767 311 SGTFFIYSAFSVITV 325 (350)
Q Consensus 311 ~~~~~~~~~~~~~~~ 325 (350)
...+...+++.++..
T Consensus 378 ~~~~~~~~~~~~~~~ 392 (399)
T TIGR00893 378 AGALMVVAALALIGA 392 (399)
T ss_pred hHHHHHHHHHHHHHH
Confidence 334444444444333
No 29
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=7.1e-25 Score=186.48 Aligned_cols=288 Identities=19% Similarity=0.254 Sum_probs=182.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+ +||+.|++.++..+
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 182 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPL 182 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHH
Confidence 35677889999999999999999999999999999999999999999999999998887654 89999988765544
Q ss_pred H-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 L-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+ ..+...++||++++..++ +.++.++..++......+..++ +..+ .+.+++..+...+..++++..+.... ..+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 257 (398)
T TIGR00895 183 LLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS--ALPE-QKATQGTKRSVFKALFQGKTARITVL-LWL 257 (398)
T ss_pred HHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc--cccc-cccccchhhHHHHHHhcchhHHHHHH-HHH
Confidence 4 555567789988765544 3333333222222111000000 0000 00000011112222333333232222 222
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
..+...........+.|.+.++.+.+... .......++.+++.++.+++.||++||+.. ....+..+....+.. .
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~--~ 334 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGS--T 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHH--H
Confidence 22233333455566777777777777655 666777888999999999999999998433 333333333222221 1
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
..+ .........+.+.+.+... +...++..|.+|++.|+++.|+.+....+|..++|.+.|.+
T Consensus 335 ~~~--------~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 335 LFS--------PTLLLLLGAIAGFFVNGGQ-SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hhC--------HHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 111 2333334444444444444 44458999999999999999999999999999999999865
No 30
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=2.1e-24 Score=183.37 Aligned_cols=273 Identities=20% Similarity=0.193 Sum_probs=178.4
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC------------CchhhHHHhhch
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS------------IIPWRILALTGL 72 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~------------~~~Wr~~f~~~~ 72 (350)
.+++.|+++|++.+...+....++.|++|+++|++..++...+..+|.++++.++. ..+||+.|++.+
T Consensus 98 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 177 (394)
T TIGR00883 98 LLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSA 177 (394)
T ss_pred HHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999887642 338999999887
Q ss_pred HHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 73 VPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 73 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
+..++..+.....||+|++..+++ +++..+.+.++.++++. ++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~-~~~~~~ 224 (394)
T TIGR00883 178 VLVLIGLYLRRNLEETPVFEKAQE--------------------------------KHKKKRGPIRETLTKHR-KPFLLG 224 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHh--------------------------------ccccccCCHHHHHHhch-HHHHHH
Confidence 777666666666787764321100 01112234455555433 222222
Q ss_pred HHHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
.... +...........+.|.+. ++.+.+..+ .......+...++.++.|++.||+|||+.+.....+..+......
T Consensus 225 ~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (394)
T TIGR00883 225 LGLV-IATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL 303 (394)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 2222 222222444556667666 456666655 556677788899999999999999999977655444433322211
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHH-HHHHHHHHHHHHHHhHHHHhh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLV-VLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~ 308 (350)
... ....+ .+.......+.+.+.+....+. .+++.|.+|++.|+++.++. +....+|..++|.+.|.+.+.
T Consensus 304 ~~~-~~~~~------~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 304 MAL-LDSGS------FTLFFFLVLGLALIGGMYTGPM-GSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred HHH-hcCCc------hHHHHHHHHHHHHHHHHHhhhH-HHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 111 11111 2333333334444444444444 48999999999999999985 455668888999999999987
Q ss_pred hc-cchhhHHHH
Q 018767 309 SS-SGTFFIYSA 319 (350)
Q Consensus 309 ~~-~~~~~~~~~ 319 (350)
.+ +.......+
T Consensus 376 ~g~~~~~~~~~~ 387 (394)
T TIGR00883 376 TGDWYAIGYYLA 387 (394)
T ss_pred cCcchhHHHHHH
Confidence 44 333333333
No 31
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.93 E-value=1e-24 Score=188.60 Aligned_cols=300 Identities=13% Similarity=0.055 Sum_probs=180.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~~~~~~ 76 (350)
+++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|.++++++++.+ +||+.|++.+++++
T Consensus 130 ~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~ 209 (465)
T TIGR00894 130 GIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGC 209 (465)
T ss_pred CchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHH
Confidence 4567899999999999999999999999999999999999999999999999988776543 89999999888877
Q ss_pred HHHH-HHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLV-GLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..+ .+.+.+|+|+.. +...++.++..+ + ....++++.+.+.+++++++++..+.. .+
T Consensus 210 ~~~~~~~~~~~~~p~~~--~~~~~~~~~~i~--------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 268 (465)
T TIGR00894 210 AWSLLWFVFPADDPSIH--PCISKFEKKYIN--------------S-SLQGQKGSTRQSLPIKAIPKSLPVWAI----WF 268 (465)
T ss_pred HHHHHHHHHhcCCcccC--CCCCHHHHHHHH--------------h-hcccccCCCCCCCCHHHHhcCHHHHHH----HH
Confidence 7544 444567777421 000010000000 0 000000011123356777775443333 33
Q ss_pred HHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhh---hHHHHHHH---H
Q 018767 156 MVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMIS---AAGTFLGC---F 226 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~---~~~~~~~~---~ 226 (350)
..+......+.+..|.|.++++ .+.+..+ ....+..++.+++.+++|+++||+++|+..... .....++. .
T Consensus 269 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (465)
T TIGR00894 269 AIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPG 348 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 3333333455666788877654 5776655 666677888999999999999998755432110 11111111 1
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 227 LAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
............ ....+....+...+.+. ..+..+....|..|. .+|.+.++.+..+.+++.++|.+.|.+.
T Consensus 349 ~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 349 IFAYALPYLSAA------FYLTIIILTLANAVSSG-PLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHcCCc------hHHHHHHHHHHHHHhhh-hhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 111111111111 12222222222222222 223333455677665 7899999999999999999999999887
Q ss_pred hhh----ccchhhHHHHhhHHHhhheee
Q 018767 307 SWS----SSGTFFIYSAFSVITVLFVAK 330 (350)
Q Consensus 307 ~~~----~~~~~~~~~~~~~~~~~~~~~ 330 (350)
+.. +...+.+.++..++..++...
T Consensus 421 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 421 SQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 642 233455555555555544433
No 32
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=1.9e-24 Score=182.52 Aligned_cols=284 Identities=13% Similarity=0.068 Sum_probs=180.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhchHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTGLVPC 75 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~~~~~ 75 (350)
+|++.+++.|+++|++.+...+....++.|++| ++|+++++++..+...|..+++.++..+ +||+.+.+.++..
T Consensus 95 ~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~ 173 (393)
T PRK09705 95 PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPA 173 (393)
T ss_pred cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 478889999999999999999999999999987 7899999999887777777776665543 8999887655554
Q ss_pred HHHHHHHhcc-CCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHH
Q 018767 76 VLLLVGLCFV-PESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVS 154 (350)
Q Consensus 76 ~~~~~~~~~~-~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (350)
++..+..+.. ++.|+ . + ++ ++.+.++.++++..+....
T Consensus 174 ~~~~~~~~~~~~~~~~-------~-~-----------------------------~~-~~~~~~~~l~~~~~~~l~~--- 212 (393)
T PRK09705 174 VVALFAWWWQSAREVA-------S-S-----------------------------HK-TTTTPVRVVFTPRAWTLGV--- 212 (393)
T ss_pred HHHHHHHHHHhcCCCc-------c-c-----------------------------cC-CCcCCcccccCHhHHHHHH---
Confidence 4433333222 22110 0 0 00 0001122333332222221
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
........+.....+.|.+.++.+.+... ....+..++.++++++.+++.||++||+....+..+..++...+...
T Consensus 213 -~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~- 290 (393)
T PRK09705 213 -YFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL- 290 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc-
Confidence 22222223445666777777777777665 66778889999999999999999999998887766666655443211
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccC-CcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh-c
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIF-PINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS-S 310 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~ 310 (350)
+.+ .... ...+.+.+.+... +.......+.. |++.+++..|+.+...++++.++|.+.|++.|.. .
T Consensus 291 --~~~-------~~~~--~~~l~g~g~g~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 291 --PLQ-------LPVL--WAMVCGLGLGGAF-PLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred --cch-------HHHH--HHHHHHHhccchH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 110 1111 1122223333322 33335556666 4678899999999999999999999999999973 3
Q ss_pred cch-hhHHHHhhHHHhhheeeecccCCCCCH
Q 018767 311 SGT-FFIYSAFSVITVLFVAKFVPETKGKTL 340 (350)
Q Consensus 311 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (350)
+.. +.+.+..+++..+....+.+|+++|..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 359 YLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 333 444444444445555667788776643
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=1e-24 Score=185.28 Aligned_cols=278 Identities=15% Similarity=0.145 Sum_probs=176.6
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHHH
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVLL 78 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~ 78 (350)
++.+++.|+++|++.+...+....++.|++|+++|++++++...+...|.++++.+++.+ |||+.+++..+..++.
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 112 LLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999888888888887776654 8999988766665554
Q ss_pred HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHH
Q 018767 79 LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVL 158 (350)
Q Consensus 79 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
.+.....||+++ .+ + ++.++++.+++. +.......+...
T Consensus 192 ~~~~~~~~~~~~-----~~-~---------------------------------~~~~~~~~~~~~--~~~~~~~~~~~~ 230 (399)
T PRK05122 192 LLLARPRPAVPP-----VK-G---------------------------------ERLPFRRVLGRV--WPYGMGLALASI 230 (399)
T ss_pred HHHHhcCCCCCC-----CC-c---------------------------------cchhHHHHHHHH--HHHHHHHHHHHH
Confidence 443333343221 00 0 000112222211 111111111111
Q ss_pred HHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccc
Q 018767 159 QQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQN 238 (350)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
.+.....+.+.+..+.+.+..........++.+++.++.|++.||++||+.+..+..+..++...+... ++
T Consensus 231 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 301 (399)
T PRK05122 231 ----GFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA---PS-- 301 (399)
T ss_pred ----HHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh---cc--
Confidence 122334455555555565443355667778888899999999999999998877776666665544321 11
Q ss_pred cccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHH
Q 018767 239 MFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIY 317 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~ 317 (350)
.+.......+.+.+.+....... ....|..|++.|+++.|+.+....+|..+++.+.|.+.+. ++...+...
T Consensus 302 ------~~~~~~~~~l~G~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 374 (399)
T PRK05122 302 ------PWMALIGAALTGFGFSLVFPALG-VEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAA 374 (399)
T ss_pred ------HHHHHHHHHHHHHhHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 23333333344444443333333 6677889999999999999999999999999999999887 434445555
Q ss_pred HHhhHHHhhheeeecccCCCC
Q 018767 318 SAFSVITVLFVAKFVPETKGK 338 (350)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~ 338 (350)
+++.++..+.. .+.+++++|
T Consensus 375 ~~~~~~~~~~~-~~~~~~~~~ 394 (399)
T PRK05122 375 ALAALLGLALT-WLLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHH-HHhcccccc
Confidence 44444444333 344444433
No 34
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=3.4e-24 Score=181.49 Aligned_cols=270 Identities=16% Similarity=0.149 Sum_probs=174.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
|++.+++.|+++|++.+...+...+++.|+.|+|+|++++++.+.+...|..+++++++.+ |||+.+.+..+..++
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 190 (392)
T PRK12382 111 KFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLL 190 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 4567899999999999988898999999999999999999999998888888888887654 899887765554444
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
........||.++. + + ++.+.++..+.. ++... ...+..
T Consensus 191 ~~~~~~~~~~~~~~-----~--~--------------------------------~~~~~~~~~~~~-~~~~~-~~~l~~ 229 (392)
T PRK12382 191 AWAFNGTVRKVPAH-----A--G--------------------------------ERPSLWSVVGLI-WKPGL-GLALQG 229 (392)
T ss_pred HHHHHHhccCCCCC-----c--c--------------------------------cCchHHHHHHHH-HHhHH-HHHHHH
Confidence 33333333433210 0 0 000111111110 01111 111111
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccc
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQ 237 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
. .......+.+.++++.+.+..........++.+++.++.|++.||+|||+.+..+..+..++...+... ++
T Consensus 230 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---~~- 301 (392)
T PRK12382 230 V----GFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA---PT- 301 (392)
T ss_pred H----HHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc---cc-
Confidence 1 122334455556666666544455556677788899999999999999999988877777665554321 11
Q ss_pred ccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhH
Q 018767 238 NMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFI 316 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~ 316 (350)
.+.......+.+.+.+...... .+...|.+|+++|+++.|+.+....+|..++|.+.+.+.+. ++...+..
T Consensus 302 -------~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 373 (392)
T PRK12382 302 -------AWVALAGAALTGAGCSLIFPAL-GVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLA 373 (392)
T ss_pred -------HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 2233333334443433333333 36778889999999999999999999999999999999987 44445555
Q ss_pred HHHhhHHHhhhe
Q 018767 317 YSAFSVITVLFV 328 (350)
Q Consensus 317 ~~~~~~~~~~~~ 328 (350)
.+.+.++..++.
T Consensus 374 ~~~~~~~~~~~~ 385 (392)
T PRK12382 374 GAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHH
Confidence 555444444433
No 35
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.93 E-value=1.6e-24 Score=185.71 Aligned_cols=309 Identities=13% Similarity=0.137 Sum_probs=181.2
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC-----chhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI-----IPWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~-----~~Wr~~f~~~~~~~~ 76 (350)
+++.+.+.|++.|++.|..++....++.|++|+++|++++++.+.+..+|..+++.+... .+||+.|++.+++.+
T Consensus 117 ~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~ 196 (438)
T TIGR00712 117 SIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAI 196 (438)
T ss_pred hHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 345677899999999999999899999999999999999999999999998888765432 389999999887776
Q ss_pred H-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcch-hhhhhcccchhHHHHHHH
Q 018767 77 L-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKAS-IRDLFKSKYIRSVIIGVS 154 (350)
Q Consensus 77 ~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 154 (350)
+ .++..+++||+|+.... ++.++. +++..+...+ + .+.+.+.+.. .+..++++..+.......
T Consensus 197 i~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 197 IVALFAFAMMRDTPQSCGL-PPIEEY-------RNDYPDDYNE------K-AEQELTAKEIFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred HHHHHHHHhccCCHHhcCC-CCchhc-------cccccccccc------c-cccccchHHHHHHHHccCchHHHHHHHHH
Confidence 6 44556678888753210 000000 0000000000 0 0000000111 122455544333333222
Q ss_pred HHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+.. ...+....+.|.++++ .+.+... ....+..+.++++.+++|++.||+++++....+.....+..+.....
T Consensus 262 ~~~----~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 337 (438)
T TIGR00712 262 FVY----LLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVY 337 (438)
T ss_pred HHH----HHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHH
Confidence 222 2234455677777665 5666554 56677778899999999999999975543333332222221111111
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHH-HHHHHHhHHHHhh-h
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGA-WAVSYTFNFLMSW-S 309 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~-~ 309 (350)
. ...... .+.........+.. ..+..........|.+|++.|+++.|+.+...++|+ .++|.+.|.+.++ +
T Consensus 338 ~-~~~~~~-----~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g 410 (438)
T TIGR00712 338 W-MNPAGN-----PLVDMICMIVIGFL-IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 410 (438)
T ss_pred H-hcCCCc-----hHHHHHHHHHHHHH-HccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc
Confidence 1 111110 12111111222211 111111212457799999999999999999988875 6899999999887 4
Q ss_pred ccchhhHHHHhhHHHhhheeeecccCC
Q 018767 310 SSGTFFIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
+...+.+..++.+++.+......+|+|
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 411 WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 445555666666566665556666654
No 36
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=3.5e-24 Score=180.46 Aligned_cols=298 Identities=14% Similarity=0.141 Sum_probs=196.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~~~~~~ 76 (350)
+++.+++.|++||++.|..+|....+.++|.|++||++..++..++..+|.+++.++++.+ ||+.+|++.++.++
T Consensus 127 ~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~ 206 (466)
T KOG2532|consen 127 GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGL 206 (466)
T ss_pred cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHH
Confidence 3557899999999999999999999999999999999999999999999999888777655 89999999999888
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHh--ccCCCcchhhhhhcccchhHHHHHH
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILT--LRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
+.. +...+..|+|+- +++. .++|.+..++.... .++..+.+++++++++. ++++
T Consensus 207 i~~~~w~~~~~d~P~~---h~~i----------------s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~----vwai 263 (466)
T KOG2532|consen 207 IWFILWFLFYSDSPSK---HPNI----------------SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPP----VWAI 263 (466)
T ss_pred HHHHHHHHHhcCCccc---CCCC----------------CHHHHHHHHhcccccccCCCCCCCHHHHHcCHH----HHHH
Confidence 854 445667788842 1110 11111222211111 12224778999999654 3444
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCce---------eehhhhHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRP---------LIMISAAGT 221 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~---------~~~~~~~~~ 221 (350)
.+..+....++..+..|.|.++++ ++++... +..++..+...+..+++|.++||..+|. .-.++....
T Consensus 264 ~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ 343 (466)
T KOG2532|consen 264 WISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGP 343 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHH
Confidence 445555555677888889988875 5666544 8888999999999999999999986641 112222222
Q ss_pred HHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHH
Q 018767 222 FLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYT 301 (350)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 301 (350)
+++++.+ ...+..+ .+..+.++.+.....+....... .-..|. .+++.+..+|+.+....+.++++|.+
T Consensus 344 ai~l~~l---~~~~~~~------~~~a~~~l~~~~~~~g~~~~Gf~-~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 344 AVFLLVL---AFTSDEH------RLLAVILLTIAIGLSGFNISGFY-KNHQDI-APQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred HHHHHee---eecCCCc------chHHHHHHHHHHHHcccchhhhH-hhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3322222 2222111 22223222222222222222222 333333 44567999999999999999999999
Q ss_pred hHHHHhh----hccchhhHHHHhhHHHhhheeeecc
Q 018767 302 FNFLMSW----SSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 302 ~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
.+.+... .+...|.+.+++.++..++..++..
T Consensus 413 vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 413 VGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred eeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 9998832 3345566677777776666555543
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.92 E-value=4.2e-24 Score=186.68 Aligned_cols=300 Identities=15% Similarity=0.120 Sum_probs=178.8
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+....++.|++|+++|+++.++...+..+|..+++.+.+.+ +||+.|++..+..+
T Consensus 106 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 106 PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 36778899999999999999999999999999999999999999999999999998877655 89999988666555
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHH---HHHHhccCCCcchh-------------hhh
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQ---VYILTLRSLPKASI-------------RDL 140 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------------~~~ 140 (350)
+.++....+||++++..++++.++.++..+.....+........... .............+ ...
T Consensus 186 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (496)
T PRK03893 186 FALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISF 265 (496)
T ss_pred HHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Confidence 55555666788776543322211111111111000000000000000 00000000000000 000
Q ss_pred --hcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeeh
Q 018767 141 --FKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIM 215 (350)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~ 215 (350)
..+...++.........+..+........+.|.+.+ +.|.+..+ .......++.+++.++.|++.||+|||+.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 345 (496)
T PRK03893 266 MVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV 345 (496)
T ss_pred HHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 000111111211222222222112234456677764 67777655 6677788889999999999999999999877
Q ss_pred hhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHH
Q 018767 216 ISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGA 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 295 (350)
.+..+..+..+.... .... .............+.+.+..+...+++.|.+|++.|+++.|+.+....+|+
T Consensus 346 ~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~ 415 (496)
T PRK03893 346 CSLLISQLLIIPVFA---IGGA-------NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGG 415 (496)
T ss_pred HHHHHHHHHHHHHhh---cccc-------HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHH
Confidence 765554444333211 1110 111121222222222333334444788999999999999999999999999
Q ss_pred HHHHHHhHHHHhhhc
Q 018767 296 WAVSYTFNFLMSWSS 310 (350)
Q Consensus 296 ~~~~~~~~~l~~~~~ 310 (350)
.++|.+.|.+.+..+
T Consensus 416 ~lgp~l~g~l~~~~g 430 (496)
T PRK03893 416 ALAPILGALIAQRLD 430 (496)
T ss_pred HHHHHHHHHHhccCC
Confidence 999999999988743
No 38
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=4.3e-24 Score=180.35 Aligned_cols=275 Identities=15% Similarity=0.036 Sum_probs=177.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.++++|+++|++.+..++.....+.|++| ++|+++.++...+.++|..+++++...+ +||+.|++.++..+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 357788999999999999888888888999987 6799999999999999987655444333 89999999888777
Q ss_pred HHHH-HHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLV-GLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..+ ..++++|+|+.. .++ +++ .++++.+.++.++++..+........
T Consensus 168 ~~~~~~~~~~~~~~~~~-~~~---------------~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (377)
T TIGR00890 168 LVIVLGAFLIGYPPGQL-IKT---------------NIE---------------VSVKDYTVWEMLRTPQFWVLYLSFFL 216 (377)
T ss_pred HHHHHHHHheecCchhc-ccc---------------Ccc---------------cchhhhhHHHHHcCccHHHHHHHHHH
Confidence 6544 344555544210 000 000 00011123455565544433332222
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
.... ......+.+.+.++.+.+..+ .......++.++++++.|++.||+|||+.+..+.....++...+...
T Consensus 217 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-- 290 (377)
T TIGR00890 217 NAVS----GLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI-- 290 (377)
T ss_pred HhHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc--
Confidence 2211 122233344455667766544 56677788899999999999999999999888777777666554322
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhcc-c
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSS-G 312 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~ 312 (350)
+... .........+.+...+... +....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.+..++ .
T Consensus 291 -~~~~------~~~~~~~~~~~g~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 362 (377)
T TIGR00890 291 -PMLN------DVLFLATVALVFFTWGGTI-SLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEY 362 (377)
T ss_pred -ccch------hHHHHHHHHHHHHHhccch-hccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhh
Confidence 1100 1222222223333333333 33337889999999999999999999999999999999999887443 3
Q ss_pred hhhHHHHhh
Q 018767 313 TFFIYSAFS 321 (350)
Q Consensus 313 ~~~~~~~~~ 321 (350)
.+.+.+++.
T Consensus 363 ~f~~~~~~~ 371 (377)
T TIGR00890 363 TFIVTGAFA 371 (377)
T ss_pred HHHHHHHHH
Confidence 444444333
No 39
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=5.7e-24 Score=183.81 Aligned_cols=291 Identities=13% Similarity=0.101 Sum_probs=183.8
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC-----CchhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS-----IIPWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~-----~~~Wr~~f~~~~~~~~ 76 (350)
+++.+.+.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++. ..|||..|++.++..+
T Consensus 106 ~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~l 185 (491)
T PRK11010 106 QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLI 185 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999888885544 3489999999888777
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+..+..+++||+++.. ++ ++ + . + +....++++.++++..+.......+.
T Consensus 186 l~~l~~~~~~e~~~~~---~~-~~-------------~--~--~----------~~~~~~l~~~~~~~~~~~~ll~~~l~ 234 (491)
T PRK11010 186 PCIIATLLAPEPTDTI---PV-PK-------------T--L--E----------QAVVAPLRDFFGRNNAWLILLLIVLY 234 (491)
T ss_pred HHHHHHHhcCCCcccc---cc-cc-------------c--h--h----------hhHHHHHHHHHcCcCHHHHHHHHHHH
Confidence 7666655678865310 00 00 0 0 0 00112355666655434333322222
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCch--HHH-HHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGK--LGT-ILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
.... ........|++.++.|.+..+ ... ....++.+++.+++|+++||+|+|+.+.++..+..+....+.....
T Consensus 235 ~~~~---~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~ 311 (491)
T PRK11010 235 KLGD---AFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI 311 (491)
T ss_pred HHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2111 112223344444567877766 333 3445788999999999999999988777655554444433322111
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccch
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGT 313 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 313 (350)
..+ + .........+.....+.+.... +++..+..|++.+++..++.+....+|..+++.+.|.+.+..++..
T Consensus 312 ~~~-~------~~~l~~~~~l~~~~~g~~~~~~-~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~ 383 (491)
T PRK11010 312 TDK-N------LYSMGAAVFFENLCGGMGTAAF-VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPT 383 (491)
T ss_pred ccc-c------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 111 1 1222222222222223333333 4888899999999999999999999999999899999998754544
Q ss_pred hhHHHHhhHHHhhheeeeccc
Q 018767 314 FFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~ 334 (350)
++.+..+..+.+++.....++
T Consensus 384 ~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 384 FYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 444444444444444334443
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.92 E-value=3e-23 Score=174.85 Aligned_cols=270 Identities=11% Similarity=0.012 Sum_probs=166.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+ +||+.|++.++..+
T Consensus 89 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 168 (382)
T PRK10091 89 SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNI 168 (382)
T ss_pred CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHH
Confidence 47888999999999999998888899999999999999999999999999988888776554 89999999887766
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+.. ....++||.++ +.+. + .+.. .+.++++..+.......
T Consensus 169 ~~~~~~~~~lp~~~~----~~~~---------------~------------------~~~~-~~~~~~~~~~~~~~~~~- 209 (382)
T PRK10091 169 AVLASIYFWVPDIRD----EAKG---------------G------------------LREQ-FHFLRSPAPWLIFAATM- 209 (382)
T ss_pred HHHHHHHHhCCCCCc----cccc---------------C------------------HHHH-HHHhcChHHHHHHHHHH-
Confidence 643 34556777542 0000 0 0001 11233332222211111
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
...........+..|++.+..+.++.. .......++.+++.++.+++.||+|+|+.+..+..+..++.+.+.....
T Consensus 210 --~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~ 287 (382)
T PRK10091 210 --FGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG 287 (382)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 111111112223334444456777655 6667788889999999999999999999888777766666544422111
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hcc-
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSS- 311 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~- 311 (350)
. .+.......+...+......+.......+..|++.++.+ ..+....+|..++|.+.|.+.+. .++
T Consensus 288 --~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~ 355 (382)
T PRK10091 288 --M--------KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYN 355 (382)
T ss_pred --h--------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcc
Confidence 1 122222222222222222223332344455555555544 34677889999999999999985 333
Q ss_pred chhhHHHHhhHH
Q 018767 312 GTFFIYSAFSVI 323 (350)
Q Consensus 312 ~~~~~~~~~~~~ 323 (350)
..+...+++..+
T Consensus 356 ~~~~~~~~~~~~ 367 (382)
T PRK10091 356 YVALPAALLSFA 367 (382)
T ss_pred hHHHHHHHHHHH
Confidence 334444333333
No 41
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=1.9e-23 Score=181.22 Aligned_cols=291 Identities=15% Similarity=0.118 Sum_probs=182.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..++|.+++.+ +||+.|++..+...
T Consensus 96 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 96 GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999988887655 89999999877666
Q ss_pred HHHHH-HhccCCChHHHHHhCChHHHHHHHHH---------HhcCCc-chHH-HHHH----------HHHHHHhccCCCc
Q 018767 77 LLLVG-LCFVPESPRWLAKVGLDKEFQVALRK---------LRGKDA-DITR-EAAE----------IQVYILTLRSLPK 134 (350)
Q Consensus 77 ~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~-~~~~----------~~~~~~~~~~~~~ 134 (350)
+..+. ....|+.+. .+.+.+........ ..+.+. .... .... .....+.+.+++.
T Consensus 176 l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (471)
T PRK10504 176 IGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRAL 252 (471)
T ss_pred HHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 64433 344455431 11222222111100 011110 0000 0000 0000011111112
Q ss_pred chhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCc
Q 018767 135 ASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRR 211 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr 211 (350)
.+. ++++++.+.......++... .......+.|++++. .+.+... ....+..++.+++.++.+++.||+|||
T Consensus 253 ~~~-~l~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 253 FSL-KLFRTRTFSLGLAGSFAGRI----GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred cCH-HHhcccchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 222 46676665444433333222 233445566766653 5666544 556666777777889999999999999
Q ss_pred eeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHH
Q 018767 212 PLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVN 291 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 291 (350)
+.+..+..+..+...++.... ...+ .+.........+.+.+....+.. ....+..|++.++.+.++.++..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 398 (471)
T PRK10504 328 RVLVATTLGLALVSLLFMLVA--LLGW------YYLLPFVLFLQGMVNSTRFSSMN-TLTLKDLPDNLASSGNSLLSMIM 398 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhcc--cccc------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCHHhccchHHHHHHHH
Confidence 999888777766655543221 1100 12222223333344444444444 77888999999999999999999
Q ss_pred HHHHHHHHHHhHHHHhh
Q 018767 292 WSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 292 ~~g~~~~~~~~~~l~~~ 308 (350)
.+|..+++.+.|.+.+.
T Consensus 399 ~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 399 QLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988775
No 42
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=1.3e-23 Score=182.53 Aligned_cols=293 Identities=13% Similarity=0.061 Sum_probs=185.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhccc-CccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIA-PRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPC 75 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~ 75 (350)
+|++.++++|+++|+|.+...+.....+.+.+ |+++|++++++......+|..++|.+++.+ +||+.|++..+.+
T Consensus 92 ~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~ 171 (495)
T PRK14995 92 PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIV 171 (495)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHH
Confidence 47889999999999999998888888787765 679999999999999999999999988766 8999999987777
Q ss_pred HHH-HHHHhccCCChHHHHHhCChHHHHHHH---------HHHhc--CCc-chHHHHHH-------HHH-HHHhccCCCc
Q 018767 76 VLL-LVGLCFVPESPRWLAKVGLDKEFQVAL---------RKLRG--KDA-DITREAAE-------IQV-YILTLRSLPK 134 (350)
Q Consensus 76 ~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~---------~~~~~--~~~-~~~~~~~~-------~~~-~~~~~~~~~~ 134 (350)
++. ++..+++||+|+. ++++.+...... ..+.. .+. ........ ... ...+.+..++
T Consensus 172 ~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p 249 (495)
T PRK14995 172 LVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP 249 (495)
T ss_pred HHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 664 3445667876531 111111111100 00010 000 00000000 000 0011111111
Q ss_pred chhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCc
Q 018767 135 ASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRR 211 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr 211 (350)
.-..+++|++.........+.... ......++.|.+++. .|.+..+ ....+..++..++.++.|++.||+|+|
T Consensus 250 ~~~~~lf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~ 325 (495)
T PRK14995 250 MIDMRLFTHRIILSGVVMAMTAMI----TLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR 325 (495)
T ss_pred CcCHHHhCCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 112356676544333322222221 233445566666554 5777655 677778888999999999999999999
Q ss_pred eeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHH
Q 018767 212 PLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVN 291 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 291 (350)
+.+..+..+..++...+... ..... .+.......+.+.+.+....+.. ..+.+..|++.++.+.++.++..
T Consensus 326 ~~~~~g~~~~~~~~~~l~~~---~~~~~-----~~~~~~~~~l~G~g~g~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 326 LVATGGMALSALSFYGLAMT---DFSTQ-----QWQAWGLMALLGFSAASALLAST-SAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHh---cCCCc-----hHHHHHHHHHHHHhHHHHHHHHH-HHHHhcCCHHhcchHHHHHHHHH
Confidence 98877777766665554322 11110 22233344444555555444454 67778899999999999999999
Q ss_pred HHHHHHHHHHhHHHHhh
Q 018767 292 WSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 292 ~~g~~~~~~~~~~l~~~ 308 (350)
.+|+.+|+.+.+.+.++
T Consensus 397 ~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 397 ELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988764
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=4.6e-23 Score=173.31 Aligned_cols=264 Identities=11% Similarity=-0.011 Sum_probs=179.3
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
|++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.+++.+ +||+.|++.++..++
T Consensus 91 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~ 170 (365)
T TIGR00900 91 NIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAI 170 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999999999999888766 899999887776666
Q ss_pred HHHHHhcc--CCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 78 LLVGLCFV--PESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 78 ~~~~~~~~--~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
..+....+ ||+++. ++.+. .++...+ ....+++.++++..+.......+
T Consensus 171 ~~~~~~~~~~~~~~~~----~~~~~--------------~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T TIGR00900 171 SALLIVSVRIPELAAS----EIQAL--------------SNAVLRD-----------TREGIKFVLKNPLLRTLLLLALL 221 (365)
T ss_pred HHHHHHhcccccCCCc----ccccc--------------chhHHHH-----------HHhHHHHHHcCcHHHHHHHHHHH
Confidence 54443333 332210 00000 0000000 01134455665554444333332
Q ss_pred HHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
..... ......+.|.+.++ .+.+..+ .......++.+++.++.+++.||++||+.+..+..+..++........
T Consensus 222 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 222 FNLVF---APAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHH---HHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc
Confidence 22221 11222556666654 5666554 666677888899999999999999999988776655555554443221
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
+ + .+.......+.+.+.+.. .+...++..|..|++.|+++.|+.+....++..++|.+.|.+.+.
T Consensus 299 ---~-~------~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 299 ---P-N------FPLFLVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred ---h-h------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 233333444444444443 344448899999999999999999999999999999999998875
No 44
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=1.3e-22 Score=171.21 Aligned_cols=259 Identities=14% Similarity=0.087 Sum_probs=167.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.++++|+++|++.+...+...+++.|++|+++|+++.++...+.++|..++|++++.+ |||+.|++.++..+
T Consensus 106 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~ 185 (394)
T PRK10213 106 NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGV 185 (394)
T ss_pred ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999988888888765 89999998777666
Q ss_pred HHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..+. ....||+|+. + ++...+.++.++++..+.......+
T Consensus 186 ~~~l~~~~~~p~~~~~----~----------------------------------~~~~~~~~~~l~~~~~~~~~~~~~~ 227 (394)
T PRK10213 186 LCIFWIIKSLPSLPGE----P----------------------------------SHQKQNTFRLLQRPGVMAGMIAIFM 227 (394)
T ss_pred HHHHHHHHHCCCCCcc----c----------------------------------ccchhHHHHHhcCHHHHHHHHHHHH
Confidence 54433 3446775420 0 0001123345555443333322222
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
..... +....+..|.+.++.|.+... ......+++.+++.++.+++.||.+ |+.+..+..+..+....+...
T Consensus 228 ~~~~~---~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~-- 301 (394)
T PRK10213 228 SFAGQ---FAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLW-- 301 (394)
T ss_pred HHHHH---HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHH--
Confidence 22111 122233346666777887765 5566777889999999999999954 444333333322222222111
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccch
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGT 313 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 313 (350)
.++ .+.......+.+.+++....... +.+.+..|+ .++...+......++|..+||.+.|.+.+..+...
T Consensus 302 ~~~--------~~~~~~~~~l~G~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~ 371 (394)
T PRK10213 302 GSD--------KIVATGVAIIWGLTFALVPVGWS-TWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTS 371 (394)
T ss_pred hhh--------HHHHHHHHHHHHHHHHhhhHHHH-HHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhh
Confidence 111 23333344444444444443343 567777774 46677788888889999999999999998744333
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=6.4e-23 Score=178.88 Aligned_cols=294 Identities=15% Similarity=0.121 Sum_probs=187.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.++++|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+++.+++.+ +||+.|++.+++++
T Consensus 88 ~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~ 167 (485)
T TIGR00711 88 PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGI 167 (485)
T ss_pred CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHH
Confidence 46788999999999999999999999999999999999999999999999999998888765 89999999887776
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHH---------HH-hcCCcch--HHHHH-HH--------HHHHHhccCCCc
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALR---------KL-RGKDADI--TREAA-EI--------QVYILTLRSLPK 134 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~---------~~-~~~~~~~--~~~~~-~~--------~~~~~~~~~~~~ 134 (350)
+.. +..+..||+++ ..+++.+....... .. +.++.+. +.+.. .. .....+.+++++
T Consensus 168 ~~~~~~~~~~~~~~~--~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (485)
T TIGR00711 168 IVVVVAFFILPRDKP--AASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNP 245 (485)
T ss_pred HHHHHHHHHcCCccc--cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 644 34455676543 11122221111100 00 1111111 00000 00 000001111111
Q ss_pred chhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCc
Q 018767 135 ASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRR 211 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr 211 (350)
....+.++++......+..++..+. ......+.|.++++ .+.+..+ ....+..++.+++.++.|++.||+|||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~ 321 (485)
T TIGR00711 246 LVDLRLFKYRNFTIGCVYMSLLGLG----LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR 321 (485)
T ss_pred ccCHHHHcCCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH
Confidence 1223456665544443333332222 33445566766654 5776655 666778888999999999999999999
Q ss_pred eeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHH
Q 018767 212 PLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVN 291 (350)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 291 (350)
+.+..+..+..++...+... ...+.. .+.......+.+.+.+....+.. ....+..|++.|+++.|+.+..+
T Consensus 322 ~~~~~g~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 393 (485)
T TIGR00711 322 KLVTIGLILYAVGFYWRAFT--FTPDTP-----FLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIARGSSLSNFTR 393 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCCCCC-----HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHhHHHHHHHHHH
Confidence 98888777766666554311 111110 22233333444444444444554 66678889999999999999999
Q ss_pred HHHHHHHHHHhHHHHhh
Q 018767 292 WSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 292 ~~g~~~~~~~~~~l~~~ 308 (350)
.+|+.+++.+.+.+.++
T Consensus 394 ~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 394 QLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988764
No 46
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=1.3e-22 Score=171.10 Aligned_cols=273 Identities=15% Similarity=0.129 Sum_probs=168.5
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhH--HhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLL--TTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVP 74 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~ 74 (350)
+|++.+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|..+++.+++.+ +||+.|++.++.
T Consensus 85 ~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~ 164 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALA 164 (375)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHH
Confidence 3667788899999988888888888899999887777654 5777777778888887776654 899999998887
Q ss_pred HHHHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 75 CVLLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 75 ~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
.++.. +..+++||+|+...++ .++.+.++.++++..+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 208 (375)
T TIGR00899 165 FVLCGVLVWLFLPSYPRGAPGA------------------------------------LTRLEVRGLLASRDTRLLFVAC 208 (375)
T ss_pred HHHHHHHHHHhCCCcccCcccc------------------------------------cCcchhhhhhcCcchHHHHHHH
Confidence 66644 4455588876321000 0001122344444434333332
Q ss_pred HHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
.+.... ......+.|.+. ++.+.++.+ ...........++.++.|++.||+|||+.+..+.....+.......
T Consensus 209 ~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 209 TLMWGC----NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHH----HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 222221 122233344443 556776655 3344445566778889999999999999887665544433332211
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
.++ .+.......+.+.+.+.. .+....+..|..|++ ++++.++.+...++|..++|.+.|.+.+..+
T Consensus 285 ---~~~--------~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 285 ---DNS--------LWALLMLQLLNAIFIGIL-AGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111 222222223333333333 234447788888765 6799999999999999999999999988743
Q ss_pred -cchhhHHHHhhHHHhh
Q 018767 311 -SGTFFIYSAFSVITVL 326 (350)
Q Consensus 311 -~~~~~~~~~~~~~~~~ 326 (350)
...+.+.++...+..+
T Consensus 352 ~~~~~~~~~~~~~~~~~ 368 (375)
T TIGR00899 352 YHAVYWFAIVMLIVALF 368 (375)
T ss_pred chhHHHHHHHHHHHHHH
Confidence 4444444444444433
No 47
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.91 E-value=1.5e-22 Score=169.48 Aligned_cols=281 Identities=12% Similarity=0.067 Sum_probs=180.2
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHH----HHHhcC----------------
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSV----AYIIGS---------------- 60 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~----~~~~~~---------------- 60 (350)
+|++.+++.|++.|++ |..++.....+++|+|+++||+++|+.....++|..+ +|.+..
T Consensus 126 ~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~ 204 (462)
T PRK15034 126 TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQAD 204 (462)
T ss_pred CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 3778999999999998 7788999999999999999999999996555555544 443221
Q ss_pred --CchhhHHHhhchHHHHHHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchh
Q 018767 61 --IIPWRILALTGLVPCVLLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASI 137 (350)
Q Consensus 61 --~~~Wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (350)
..+||...++.+++.++..+. +++++|.|+ ++.+..+.
T Consensus 205 g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---------------------------------------~~~~~~~~ 245 (462)
T PRK15034 205 GSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---------------------------------------SRASIADQ 245 (462)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---------------------------------------cccCHHHH
Confidence 224888877777766664443 444444331 01112234
Q ss_pred hhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeeh
Q 018767 138 RDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIM 215 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~ 215 (350)
.+.+|+++.|...+ ..++.+..+..+.++.|++.++. ++... .......+...+..+++|+++||+|+|+++.
T Consensus 246 ~~vlk~~~~Wllsl----ly~~tFG~fvg~s~~lp~~~~~~-~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~ 320 (462)
T PRK15034 246 LPVLQRLHLWLLSL----LYLATFGSFIGFSAGFAMLAKTQ-FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTL 320 (462)
T ss_pred HHHhCCCchhHHHH----HHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHH
Confidence 55677665443333 33444444666777787776552 32222 2344456778888999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCc------------------
Q 018767 216 ISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI------------------ 277 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~------------------ 277 (350)
++.+.+.++.............. ..+.............+.+.+++. .++.+.+|+
T Consensus 321 ~~~i~~~i~~~~~~l~lp~~~~~-----~~~~~~~~~~~l~~~~G~gngsvf-k~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 321 INFIFMAIFSALLFLTLPGTGSG-----NFIAFYAVFMGLFLTAGLGSGSTF-QMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred HHHHHHHHHHHHHHHHhcccccc-----HHHHHHHHHHHHHHHhcccchHHH-HhhHHHHhhhhhhcccccccchhHHhh
Confidence 88877776654432222111000 022333333333344455555554 777787874
Q ss_pred ---chhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-h-ccchhhHHHHhhHHHhhheeeec
Q 018767 278 ---NIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-S-SSGTFFIYSAFSVITVLFVAKFV 332 (350)
Q Consensus 278 ---~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 332 (350)
++-|.+.|+....+.+|+++.|.+.+...+. + +...++.+.+..+++.++.+.+.
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 1457889999999999999999999888776 3 33446666666666666655443
No 48
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=1.2e-22 Score=172.90 Aligned_cols=278 Identities=14% Similarity=0.082 Sum_probs=176.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|.+..++......+|..++|.+++.+ +||+.|++.++..+
T Consensus 99 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~ 178 (406)
T PRK15402 99 QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAA 178 (406)
T ss_pred ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHH
Confidence 36778899999999999988899999999999999999999988888778888888776554 89999998777766
Q ss_pred HHHH-HHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLV-GLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..+ .....||+++.. ++. .+ ..+ ...++++.++++..+.......+
T Consensus 179 ~~~~~~~~~~~~~~~~~---~~~--------------~~----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 226 (406)
T PRK15402 179 LSFFGLWRAMPETAGRV---GEK--------------LS----LKE-----------LGRDYKLVLKNRRFVAGALALGL 226 (406)
T ss_pred HHHHHHHHhCCCCCccc---ccc--------------cc----HHH-----------HHHHHHHHHcCcHHHHHHHHHHH
Confidence 6444 345567764210 000 00 000 01134456665543333332222
Q ss_pred HHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
.... ......+.|.++ ++.+.++.+ .......++.+++.++.+++.||+++|+.+.++..+..++...+....
T Consensus 227 ~~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~ 302 (406)
T PRK15402 227 VSLP----LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALAT 302 (406)
T ss_pred HHHH----HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 122233345444 456776554 344455667888999999999999999988888777766666654433
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSG 312 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 312 (350)
.....+ .........+.+.+.+....... ...... +++.|++..+..+..+.++..+++.+.+.+.+..+..
T Consensus 303 ~~~~~~------~~~~~~~~~~~g~g~~~~~~~~~-~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 303 VISSHA------YLWLTAGLSLYAFGIGLANAGLY-RLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred Hccccc------HHHHHHHHHHHHHHHHHHhhhHH-HHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Confidence 221111 22233334444444444333332 333333 4478999999999999999999999999988775444
Q ss_pred hhhHHHHhhH
Q 018767 313 TFFIYSAFSV 322 (350)
Q Consensus 313 ~~~~~~~~~~ 322 (350)
.+....++..
T Consensus 375 ~~~~~~~~~~ 384 (406)
T PRK15402 375 LFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 49
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=1.8e-23 Score=176.62 Aligned_cols=284 Identities=14% Similarity=0.085 Sum_probs=170.8
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHH-hcC----CchhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYI-IGS----IIPWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~-~~~----~~~Wr~~f~~~~~~~~ 76 (350)
|++.+++.|+++|++.+...+...+++.|++|+++|+++.++...+..+|..+++. ++. ..+||+.|++.+++.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999988883 443 3389999988777665
Q ss_pred H-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 L-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+ .++...+.||+|+....+++.++ .+++.++ .++..+++.+..+...++.++++..+...+...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEM----------PNEEPDG----DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVF 227 (379)
T ss_pred HHHHHHheeeCCCccccccCccccC----------ccccccc----ccccccccccchHHHHHHHHhcchHHHHHHHHHH
Confidence 5 45556667777642111000000 0000000 0000000011112234455555543333332222
Q ss_pred HHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
... .......+.|.+.+ ..+.+..+ .......++.+++.++.+++.||..+|+...............+....
T Consensus 228 ~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
T TIGR00881 228 VYV----VRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW 303 (379)
T ss_pred HHH----HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Confidence 222 23344555666554 45776655 666777888999999999999986443332222222221111111111
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
.....+ ...........+ ....+..+....+..|.+|++.|+++.|+.+....+|+.++|.+.|.+.+..+
T Consensus 304 ~~~~~~------~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 304 LNPAAN------PLMDLICLFALG-FLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred cCcchh------HHHHHHHHHHHH-HHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 111100 122222222222 22223333444778999999999999999999999999999999999988743
No 50
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.90 E-value=1.1e-22 Score=173.44 Aligned_cols=280 Identities=13% Similarity=0.027 Sum_probs=174.1
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..+++.+++.+ +||+.|++.++..+
T Consensus 105 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (408)
T PRK09874 105 QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLF 183 (408)
T ss_pred hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 357788999999999855 5677788899999999999999999999999999988888765 89999998877766
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+.. +..+++||+++.. ++ ++ ..+ ..+..+.++++..........+
T Consensus 184 ~~~~~~~~~~~~~~~~~---~~-~~------------------~~~------------~~~~~~~~~~~~~~~~~~~~~~ 229 (408)
T PRK09874 184 LCFLVTLFCIRENFQPV---SK-KE------------------MLH------------MREVVTSLKNPKLVLSLFVTTL 229 (408)
T ss_pred HHHHHHHHHhccCcccc---cc-hh------------------hhH------------HHHHHHhCcCCchHHHHHHHHH
Confidence 644 3445566643210 00 00 000 0011122333322221111111
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch------HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK------LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
.. . ........+.+.+..+.+.+... ......+++.+++.+..|++.||+|||+.+..+..+..++.+...
T Consensus 230 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 230 II--Q-VATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HH--H-HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 11 1 11122233344444443322221 223345667778888999999999999998877766655554432
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW- 308 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~- 308 (350)
.. ++ .+...+...+.+.+.+...... .+...+..|++.|++..++.+....+|..++|.+.|.+.+.
T Consensus 307 ~~---~~--------~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~ 374 (408)
T PRK09874 307 FV---QT--------PLQLGILRFLLGAADGALLPAV-QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY 374 (408)
T ss_pred Hh---cc--------HHHHHHHHHHHHhhhHhhHHHH-HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc
Confidence 21 11 2333333333343443333333 36777888999999999999999999999999999999886
Q ss_pred hccchhhHHHHhhHHHhhheee
Q 018767 309 SSSGTFFIYSAFSVITVLFVAK 330 (350)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~ 330 (350)
++...+.+.+++.++..+..+.
T Consensus 375 g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 375 GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 4445566666655555554433
No 51
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=3.6e-22 Score=169.41 Aligned_cols=283 Identities=12% Similarity=0.072 Sum_probs=171.0
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHH-HHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGS-SVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
|++.+++.|+++|++.+...+...+++.|++|+++|++++|+.+.+.++|. ++++.+++.+ ||+..++.......
T Consensus 104 ~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 183 (402)
T TIGR00897 104 NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVL 183 (402)
T ss_pred cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 456778899999999988888888889999999999999999999999986 5788776543 76655544333322
Q ss_pred HH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+. .+..++.+|.++. .+++++ ++ .+ +.+..++++++++..+.....
T Consensus 184 ~~~~~~~~~~~~~~~~-~~~~~~--------------~~----~~-----------~~~~~~~~~~~~~~~~~~~~~--- 230 (402)
T TIGR00897 184 TGGVIALFSNKDIFTP-QHMQTR--------------EK----FS-----------ELGKAATILFTNPNVLLGGMV--- 230 (402)
T ss_pred HHHHHHHhccCCCCCc-ccccCC--------------cc----hh-----------hHHHHHHHHHcChhHHHHHHH---
Confidence 32 2233334443210 000000 00 00 001124456665543333222
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeeh-hhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIM-ISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~-~~~~~~~~~~~~~~~~~ 232 (350)
.+...........+.|.+.++.+.+..+ .......++..++.+..|+++||++||+.+. .+.+...++.+.+....
T Consensus 231 -~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~ 309 (402)
T TIGR00897 231 -RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIP 309 (402)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223455666788888888887765 4455677889999999999999999988764 22223333322222111
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hcc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSS 311 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~ 311 (350)
....++ .+.......+.+.+.+. ..+.. ....|..| ++|+++.|+.+....+|+.++|.+.+.+.+. +..
T Consensus 310 ~~~~~~------~~~~~~~~~~~G~~~~~-~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~ 380 (402)
T TIGR00897 310 QHFGHS------FAVALIIAIALGIFLAG-YVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAI 380 (402)
T ss_pred HccCCc------HHHHHHHHHHHHHHHHH-HHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 111111 22222333333333332 23443 55667655 5799999999999999999999999999987 444
Q ss_pred chhhHHHHhhHHHhhh
Q 018767 312 GTFFIYSAFSVITVLF 327 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~ 327 (350)
..+++.+++..+..++
T Consensus 381 ~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 381 GVVWIFAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555454443
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=3e-22 Score=169.57 Aligned_cols=262 Identities=15% Similarity=0.135 Sum_probs=169.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+ +||+.|++.++..+
T Consensus 91 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 170 (385)
T TIGR00710 91 NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGI 170 (385)
T ss_pred ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 36678899999999999999999999999999999999999999999999999998888765 89999988777666
Q ss_pred HHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+.. +..+..||+++.. ++. +. + + ...++++.++++..+........
T Consensus 171 ~~~~~~~~~~~~~~~~~---~~~---------------~~-~---~-----------~~~~~~~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR00710 171 LLSALIFFILPETLPYE---ARI---------------QI-S---T-----------YFETFLLLLKSKMFWGYALIYGA 217 (385)
T ss_pred HHHHHHHHhCCCCCCCc---ccC---------------CH-H---H-----------HHHHHHHHHcCchhHHHHHHHHH
Confidence 643 4445567754210 000 00 0 0 01123455555544433332222
Q ss_pred HHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
... .......+.|.+.+ +.+.++.+ .......++.+++.++.|++.||++||+.+..+..+..++...+....
T Consensus 218 ~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (385)
T TIGR00710 218 SFG----GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITA 293 (385)
T ss_pred HHH----HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 12334445555544 56776655 566677788899999999999999999988887776666665554332
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
...... .........+.+.+.+... +.......|..| +.++++.++.+.....++.+.+.+.+...+
T Consensus 294 ~~~~~~------~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 294 ILGLGS------WAMIIGPMMFVGIGNSMIS-SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred Hhccch------HHHHHHHHHHHHHHHHHHH-HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 211100 1122222233333333333 333477788877 568999999998887766666656664433
No 53
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=1.8e-22 Score=170.78 Aligned_cols=273 Identities=11% Similarity=0.058 Sum_probs=169.5
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC-----chhhHHHhhchHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI-----IPWRILALTGLVPC 75 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~-----~~Wr~~f~~~~~~~ 75 (350)
+|++.+++.|+++|++.|...+....++.|++|+++|++.++.......+|..++|.+.+. .+||+.|.+.+++.
T Consensus 93 ~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~ 172 (394)
T PRK03699 93 HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVY 172 (394)
T ss_pred chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999998888888887777766543 38999999877766
Q ss_pred HHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 76 VLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 76 ~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++..+..++ ++.|+. ++++. + ++++ ..++.++ +. ++...+
T Consensus 173 ~~~~~~~~~-~~~p~~--~~~~~-------------~---------------~~~~----~~~~~~~----~~-~~~~~~ 212 (394)
T PRK03699 173 VAIFILTLF-SEFPAL--GKHAP-------------K---------------ADKP----VAKEKWG----IG-VLFLAI 212 (394)
T ss_pred HHHHHHHHh-cCCccc--cccCc-------------c---------------ccCc----cccccCC----hH-HHHHHH
Confidence 654443332 222310 00000 0 0000 0011111 11 111222
Q ss_pred HHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
..+........+..+.|.+.+ +.+.+..+ .......++..++.++.|+++||++||+.+.....+..+...++.
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--- 289 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV--- 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH---
Confidence 222222223455667777774 56777655 556667788899999999999999999988766655444333321
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hcc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSS 311 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~ 311 (350)
..++ ...........+.+.+. ..+...++..|..|.+ ++...+.......+|+.++|.+.|.+.+. +..
T Consensus 290 ~~~~--------~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~ 359 (394)
T PRK03699 290 NTDD--------PSHLLYAILGLGFFSSA-IYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ 359 (394)
T ss_pred HcCC--------chHHHHHHHHHHHHHHH-HHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch
Confidence 1111 12222223333333332 2333336667766644 57778888889999999999999999887 444
Q ss_pred chhhHHHHhhHHHhh
Q 018767 312 GTFFIYSAFSVITVL 326 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~ 326 (350)
..++..+++..++.+
T Consensus 360 ~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 360 AALLTANGLYAVVFV 374 (394)
T ss_pred hhhhhhHHHHHHHHH
Confidence 455555555444433
No 54
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.2e-23 Score=177.61 Aligned_cols=201 Identities=15% Similarity=0.142 Sum_probs=141.6
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----------hhhHHHhh
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----------PWRILALT 70 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----------~Wr~~f~~ 70 (350)
+|++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|++++..+ ||||.|++
T Consensus 132 ~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI 211 (495)
T KOG2533|consen 132 HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFII 211 (495)
T ss_pred hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhH
Confidence 37889999999999999999999999999999999999999999999999999999887662 89999999
Q ss_pred chHHHHH-HHHHHhccCCChH--HHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchh
Q 018767 71 GLVPCVL-LLVGLCFVPESPR--WLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIR 147 (350)
Q Consensus 71 ~~~~~~~-~~~~~~~~~esp~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (350)
.++++++ +++.++++|+.|. |...+.+++-. .++.+..+.+ ...++.+...+++.++++..+
T Consensus 212 ~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~---~~~~~~~~~~------------~~~~~~~~~~~~~a~~dp~vw 276 (495)
T KOG2533|consen 212 EGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELV---VERLRESPSG------------GIENKFKWKGFKEALKDPGVW 276 (495)
T ss_pred HHHHHHHHHheEEEEecCChhhccccchHHHHHH---HHHHHhccCC------------CcccccCHHHHHHHHhchhHH
Confidence 8888777 5667788999995 21111111000 1111100000 000113445666777765544
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcc----cCCceeehhhhHH
Q 018767 148 SVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDK----SGRRPLIMISAAG 220 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~----~grr~~~~~~~~~ 220 (350)
...+ ..++.....+.+.+++|.++++ .+++..+ .+.++..++++++.+++|.++|| ..+|........+
T Consensus 277 ~~~l----~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 277 PFSL----CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred HHHH----HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4443 3333344467788899998887 3455544 78889999999999999999999 4455444443333
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=1.2e-21 Score=165.23 Aligned_cols=264 Identities=14% Similarity=0.057 Sum_probs=166.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCch---hhHHHhhchHHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSIIP---WRILALTGLVPCVL 77 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~---Wr~~f~~~~~~~~~ 77 (350)
+|++.++++|+++|++.+...+.....+.|..++++|++++++...+.++|..+++.+++.+. ++...+..+.....
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 171 (381)
T PRK03633 92 VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAA 171 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 467889999999999999988888888889999999999999999999999999999988761 22222222222211
Q ss_pred -HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 78 -LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 78 -~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
..+.....+|+++ +++++.+.++.++++..+.........
T Consensus 172 ~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (381)
T PRK03633 172 ILPLLFTRILNQQA---------------------------------------ENHDSTSIWPMLKLRQARLGVNGCIIS 212 (381)
T ss_pred HHHHHHhcccCCCC---------------------------------------CCCCCCCHHHHHHhcchHHHHHHHHHH
Confidence 1111112222110 000112334455655434322222221
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
... ......+.|.+.++.+.+... .......++.+++.+..|++.||+++|+.+..+.....++..... .
T Consensus 213 ~~~----~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~- 284 (381)
T PRK03633 213 GIV----LGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---S- 284 (381)
T ss_pred HHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---h-
Confidence 111 223334567777777776554 556667788889999999999999999988877666666554332 0
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhcc-ch
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSS-GT 313 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~~ 313 (350)
. ........+.+.+.. ...+...+.+.|..|++.++...+..+...++|+.++|.+.|.+.|+.++ ..
T Consensus 285 -~---------~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~ 353 (381)
T PRK03633 285 -Q---------AAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLL 353 (381)
T ss_pred -h---------HHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 0 111111222222222 23344457788999888888888888888999999999999999887443 44
Q ss_pred hhHHHHhhH
Q 018767 314 FFIYSAFSV 322 (350)
Q Consensus 314 ~~~~~~~~~ 322 (350)
+.+.+.+..
T Consensus 354 f~~~~~~~l 362 (381)
T PRK03633 354 FIMIASVSF 362 (381)
T ss_pred HHHHHHHHH
Confidence 444444443
No 56
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=1.2e-22 Score=169.80 Aligned_cols=261 Identities=21% Similarity=0.280 Sum_probs=174.5
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+ +||+.|++.++..+
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 162 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSL 162 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHH
T ss_pred hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhh
Confidence 35668999999999999999999999999999999999999999999999999999988766 89999999988888
Q ss_pred HHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..++ ..+.+++|+....+++.++. ++.+++....+++..+++..+........
T Consensus 163 ~~~il~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T PF07690_consen 163 IAAILFILFLPEPPPPRERESPKESE-------------------------SKKPKPLKPGFKSLFKNPVLWILLIAFFL 217 (352)
T ss_dssp HHHHHHHCCC---STTTT--SSTTTT---------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHH
T ss_pred hhhhhHhhhhhhcccccccccccccc-------------------------cccccccccccccccccchhhhhhhhhhH
Confidence 86543 34555544211111000000 00000011124555554443322222222
Q ss_pred HHHHHhhcchhhhhhHHHH-HHHhCCC-Cch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSET-FVQAGLS-SGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
..+ .......+.|.+ .+..+.+ ..+ .......+...++.++.|++.||+++|+..........+....+...
T Consensus 218 ~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T PF07690_consen 218 FFF----VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLL 293 (352)
T ss_dssp HHH----HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred HHH----HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 221 234456666765 5667777 334 45777788888889999999999999887777666666655555333
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHH
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVS 299 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 299 (350)
....+ .........+.+.+.+... +....+..|..|++.|+++.|+.+...++|+.++|
T Consensus 294 ~~~~~--------~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 294 PFSSS--------PVWLIIALFLIGFGFGIVF-PILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCH--------HHHHHHHHHHHHHHHHHHC-HHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhh--------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 32211 2333334444444444444 44459999999999999999999999999999987
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=1.5e-21 Score=163.21 Aligned_cols=255 Identities=23% Similarity=0.287 Sum_probs=188.0
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|++.|++.+...+...+++.|++|+|+|++.+++......+|..+++.+++.+ +||+.+++.++..+
T Consensus 85 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (352)
T cd06174 85 SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGL 164 (352)
T ss_pred ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36778899999999999999999999999999999999999999999999999999888876 79999998887777
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+..+...+++ +..+. ..+.
T Consensus 165 ~~~~~~~~~~---------------------------------------------------------~~~~~----~~~~ 183 (352)
T cd06174 165 LLALLLLFLL---------------------------------------------------------RLLLL----LALA 183 (352)
T ss_pred HHHHHHHHHH---------------------------------------------------------HHHHH----HHHH
Confidence 6555443322 00111 1122
Q ss_pred HHHHhhcchhhhhhHHHHHHHh-CCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCce-eehhhhHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFVQA-GLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRP-LIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~-~~~~~~~~~~~~~~~~~~~~ 232 (350)
.+...........+.+.+.++. +.++.+ .......++..++.++.+++.||++||+ .+..+..+..++........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 2222223455566667666654 666554 6777888899999999999999999999 88888777777766664321
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hcc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSS 311 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~ 311 (350)
+ .+.......+.+.+.+.. .+....+..|..|+++|++..++.+....++..++|.+.+.+.+. +..
T Consensus 264 ---~--------~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~ 331 (352)
T cd06174 264 ---S--------LALLLVALLLLGFGLGFA-FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYG 331 (352)
T ss_pred ---c--------HHHHHHHHHHHHHHHhcc-chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 1 233344444444444444 445559999999999999999999999999999999999999876 444
Q ss_pred chhhHHHHhhHHHhhhe
Q 018767 312 GTFFIYSAFSVITVLFV 328 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~ 328 (350)
..+.+.+++..+..+..
T Consensus 332 ~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 332 GVFLILAALALLAALLL 348 (352)
T ss_pred hHHHHHHHHHHHHHHHh
Confidence 55555555555554443
No 58
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=1.9e-22 Score=161.43 Aligned_cols=283 Identities=21% Similarity=0.282 Sum_probs=199.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc----CCch---hhHHHhhchHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG----SIIP---WRILALTGLVP 74 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~----~~~~---Wr~~f~~~~~~ 74 (350)
|++++++++.+.|++ |+.+.+...++++|+|||++|.++|+.. ..++|..+...++ ...+ ||....+..+.
T Consensus 104 ~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~ 181 (417)
T COG2223 104 STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVA 181 (417)
T ss_pred chHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457999999999998 5688999999999999999999999998 6677766555444 4447 99988887777
Q ss_pred HHH-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 75 CVL-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 75 ~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
.++ .+..++.+.|.|+..... ++..+..++..+++++.|..
T Consensus 182 l~v~~v~~~~~~~d~p~~r~~~----------------------------------~~~~~~~~~~v~~~~~~W~l---- 223 (417)
T COG2223 182 LAIAAVLAWLGMNDVPEHRASV----------------------------------KPQLPAQLKAVFSNKDTWLL---- 223 (417)
T ss_pred HHHHHHHHHHHhCCChhhhccc----------------------------------cccchhHHHHHhcCcchHHH----
Confidence 666 555666777777421000 00011345666666554443
Q ss_pred HHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
.+.++.++.++..+..++|.+++ +++.+... .......+.+.+..+++|+++||+|.+|++......++++......
T Consensus 224 sllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~ 303 (417)
T COG2223 224 SLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSL 303 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHc
Confidence 33444455556777778887664 57777766 6666777788889999999999999999999988888888777754
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
......+ ................+.+.+...+. .++...+|.+ .|.+.|+....+.+|++.-|...+...+..+
T Consensus 304 ~~~~~~~----~~~~~~~~~~~l~l~~~~G~GnGsvf-k~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 304 FLTGFGH----GGSFVVFVAVFLALFVFAGLGNGSVF-KMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred ccccccc----CcchHHHHHHHHHHHHHhccCcchhe-eechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 4322211 11134444445555556666666665 8888888764 6999999999999999999999999988733
Q ss_pred --cchhhHHHHhhHHHhhheee
Q 018767 311 --SGTFFIYSAFSVITVLFVAK 330 (350)
Q Consensus 311 --~~~~~~~~~~~~~~~~~~~~ 330 (350)
...++.+..+.+++.+..+.
T Consensus 378 ~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 378 SYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666666655443
No 59
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=1.1e-21 Score=166.72 Aligned_cols=260 Identities=13% Similarity=0.060 Sum_probs=167.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+ +||+.|++.++..+
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~ 171 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITL 171 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 36778899999999998888888889999999999999998888887788877777776654 99999998877777
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+..+..++++|+++. ++. ++++.++++.++++..+.........
T Consensus 172 ~~~~~~~~~~~~~~~----~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (401)
T PRK11043 172 LLILPTLRLKPSKKA----RKQ--------------------------------SQDALTFKQLLKSKTYLGNVLIFAAC 215 (401)
T ss_pred HHHHHHHHcCCCCCc----ccc--------------------------------chHHHHHHHHHcChhHHHHHHHHHHH
Confidence 765555555554320 000 00112345555554433322222211
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
.. .+.....+.|.+.++.+.+... .......++.+++.+..+++.||+++|+..........++...+......
T Consensus 216 ~~----~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 216 SA----AFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HH----HHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1233344567777777777654 44555667788889999999999999887655555544444333222221
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
..+. .+..+......+.+.+... +.......|..| +.++++.|+.++.+..++..++.+.+.+.+.
T Consensus 292 ~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 292 SHPS------LVPLLIPFCVMAAANGAIY-PIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred ccCc------HHHHHHHHHHHHHHHHHHH-HHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1111 2222333333343444333 333356667766 4689999999999998999999999888764
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=3.5e-21 Score=162.48 Aligned_cols=266 Identities=11% Similarity=-0.007 Sum_probs=166.7
Q ss_pred hhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHhhchHHHHHHHHHHh
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILALTGLVPCVLLLVGLC 83 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~~~~~~~~~~~~~~~ 83 (350)
++.|+++|++.+...|...+++.|++|+++|++++++.+....+|.++||.+++.+ .|+..+.+.+...++..+..+
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~ 171 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999877 455555555444444455556
Q ss_pred ccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhc
Q 018767 84 FVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVG 163 (350)
Q Consensus 84 ~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (350)
.+||+|+... ++.++.. ....+. ....+.+++++..+.......+....
T Consensus 172 ~l~~~~~~~~--~~~~~~~--------------~~~~~~-----------~~~~~~l~~~~~~~~~~~~~~~~~~~---- 220 (393)
T PRK11195 172 FIPRLGARRP--GQSWNPI--------------ALLRDF-----------FHACRVLWRDKLGRFSLAGTTLFWGA---- 220 (393)
T ss_pred cCCCCccccc--ccCCCHH--------------HHHHHH-----------HHHHHHHHhCchhHHHHHHHHHHHHH----
Confidence 7888763210 0000000 000000 01124556655544443332222222
Q ss_pred chhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccc
Q 018767 164 INGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
.....+..+.+. +..+.++.+ .......++.+++++..+++.||.++|+.+..+.. ..+....+.. .++
T Consensus 221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~---~~~---- 292 (393)
T PRK11195 221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMAL---QHS---- 292 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHH---HhH----
Confidence 122223333333 335666555 66777888999999999999999998887766643 2222222211 111
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcch-hhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhH
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINI-KGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFI 316 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 316 (350)
.+.......+.+.+.+....+.. +...|..|++. +|++.++.+..++++..++..+.+.+...+-...+.+
T Consensus 293 ----~~~~~~~~~~~G~~~g~~~~~~~-~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (393)
T PRK11195 293 ----LLPAYPLLILIGALGGFFVVPMN-ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVI 364 (393)
T ss_pred ----HHHHHHHHHHHHHhhhhhhhhHH-HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 23233333344444444444554 66777766654 7999999999999999999999997755444444433
No 61
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=1.5e-21 Score=164.44 Aligned_cols=273 Identities=12% Similarity=-0.013 Sum_probs=187.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
++++.+++.|+++|.+.+...|...++..|+ +++|++..+....+.++|.+++|++++.+ |||..|++..+...
T Consensus 92 ~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 92 HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA 169 (382)
T ss_pred hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 3678889999999999998899988887764 47889999999999999999999887766 99999987655433
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+.++.. .++|+++. +++ ++ ++++.+..+.++.+|++..+.......+.
T Consensus 170 ~~~~~~-~~~~~~~~---~~~-~~---------------------------~~~~~~~~~~~~~l~~~~~~~~l~~~~l~ 217 (382)
T TIGR00902 170 FMLIGF-LIKPTIPP---KDA-IP---------------------------EDESQGDSAFIALLKNPMNLRFLAAVCLI 217 (382)
T ss_pred HHHHHH-HcCCCCCC---Ccc-cc---------------------------ccccccchhHHHHHcChHHHHHHHHHHHH
Confidence 333333 33443210 000 00 00011122456777776554444433332
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
... ......+.|.+.++.|.+... .......++.+++.++.+++.||+|+|+.+.++.+...+....+....
T Consensus 218 ~~~----~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-- 291 (382)
T TIGR00902 218 QGA----HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE-- 291 (382)
T ss_pred HHH----HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--
Confidence 222 333444556666778888766 556667788888999999999999999999988888888777664322
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHH-HHHHHHHHHHHHhHHHHhhhccch
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVL-VNWSGAWAVSYTFNFLMSWSSSGT 313 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~~~~ 313 (350)
+ .+.......+.+..++....+.. .++.+. |++.|+++.++++. ...+|..++|.+.|.+.|+.+...
T Consensus 292 -~--------~~~~~~~q~l~g~~~~~~~~~~~-~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~ 360 (382)
T TIGR00902 292 -A--------FPLIFLLQILHCGTFAVCHLAAM-RYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGT 360 (382)
T ss_pred -h--------HHHHHHHHHHHHHHHHHHHHHHH-HHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 1 34444455666666666555554 788888 99899999999874 567999999999999999865555
Q ss_pred hhHHHHhhHHH
Q 018767 314 FFIYSAFSVIT 324 (350)
Q Consensus 314 ~~~~~~~~~~~ 324 (350)
++..+++.++.
T Consensus 361 ~~~~~~~~~~~ 371 (382)
T TIGR00902 361 FVFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHHH
Confidence 66666655543
No 62
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.89 E-value=2.4e-22 Score=173.52 Aligned_cols=285 Identities=14% Similarity=0.089 Sum_probs=153.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHH----HHhcC---------CchhhHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVA----YIIGS---------IIPWRILA 68 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~----~~~~~---------~~~Wr~~f 68 (350)
|++.++++|+++|++.+.. +....++.|++|+++||+++++......+|..++ +.+.. ..|||+.|
T Consensus 123 s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f 201 (476)
T PLN00028 123 SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF 201 (476)
T ss_pred CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence 5677889999999998865 4456788999999999999999876655555544 33321 13899999
Q ss_pred hhchHHHHHHHHHHhccC-CChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchh
Q 018767 69 LTGLVPCVLLLVGLCFVP-ESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIR 147 (350)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~-esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (350)
++.+++.++..+..++++ +.|+ ++.++. ++ +. +.++......+++.++++..+
T Consensus 202 ~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~----~~---~~--------------~~~~~~~~~~~~~~~~~~~~~ 255 (476)
T PLN00028 202 FVPGLLHIIMGILVLTLGQDLPD-----GNYREL----KK---SG--------------TMPKDSFSKVLRYGVTNYRTW 255 (476)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCC-----CchhhH----Hh---cC--------------ccccccHHHHHHHHHcCchhH
Confidence 998887776544444443 4342 000000 00 00 000000111234444544332
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceee----hhhhHH
Q 018767 148 SVIIGVSLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLI----MISAAG 220 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~----~~~~~~ 220 (350)
...... +...........+.|.++ ++.+.+... .......++.+++.+++|+++||++||+.. ......
T Consensus 256 ~~~~~~----~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 256 ILALTY----GYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIV 331 (476)
T ss_pred HHHHHH----HHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHH
Confidence 222221 111111223344555554 445777655 666778889999999999999999876321 111111
Q ss_pred HHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHH
Q 018767 221 TFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSY 300 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 300 (350)
..+..+.........+ .........++..+...... ..+++..+..| +.++++.|+.+..+++|+.++|.
T Consensus 332 ~~l~~i~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~ 401 (476)
T PLN00028 332 QTLGGVFCIWLGRANS--------LGAAIVVMILFSIFVQAACG-ATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQL 401 (476)
T ss_pred HHHHHHHHHHhcccch--------HHHHHHHHHHHHHHHHHhhh-hhcccCcccCh-hhchhhhhhhhccccHHHHHHHH
Confidence 1111111111111110 12222222333333322222 23466667654 67899999998888888888887
Q ss_pred HhHHHHhh-hccchhhHHHHhhHHHhhhe
Q 018767 301 TFNFLMSW-SSSGTFFIYSAFSVITVLFV 328 (350)
Q Consensus 301 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 328 (350)
+.+ ..+. ++...+.+.+++.++++++.
T Consensus 402 l~~-~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 402 LFF-TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHH-hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 764 1122 23445555555555444433
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=2.6e-21 Score=163.62 Aligned_cols=279 Identities=12% Similarity=0.102 Sum_probs=159.4
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccch--hhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLR--GLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPC 75 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~ 75 (350)
+++.+++.+.+.|...+...|...+++.|+.++++| +...++.+.+.++|.+++|++++.+ |||..|++.++..
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~ 183 (393)
T PRK15011 104 NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAF 183 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHH
Confidence 455555555554444456778888888888776655 4556788888888988888888655 9999999888776
Q ss_pred HHH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHH
Q 018767 76 VLL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVS 154 (350)
Q Consensus 76 ~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (350)
++. +....++||.++. +++ ++ + +....++ +++..........
T Consensus 184 ~~~~~~~~~~~~~~~~~---~~~-~~-----------------------------~--~~~~~~~--~~~~~~~~~~~~~ 226 (393)
T PRK15011 184 IVCGVMVWLFLPSMRKE---LPL-AT-----------------------------G--TLEAPRR--NRRDTLLLFVICT 226 (393)
T ss_pred HHHHHHHHhhcCccCCC---Ccc-cc-----------------------------c--ccccccc--ccccHHHHHHHHH
Confidence 664 4445567876520 000 00 0 0000000 0011111111111
Q ss_pred HHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
... ........+.|.+. ++.+.+..+ .......++.+++.++.|+++||+|||+.+..+.....+.....
T Consensus 227 ~~~----~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--- 299 (393)
T PRK15011 227 LMW----GTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--- 299 (393)
T ss_pred HHH----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---
Confidence 111 11223344566554 456766554 44444556677889999999999999987765544443332222
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhcc
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSS 311 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 311 (350)
...++ .+..+....+.....+...... ..+..|.+|++ |+++.++++...++|..++|.+.|.+.+..++
T Consensus 300 ~~~~~--------~~~~l~~~~l~~~~~g~~~~~~-~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~ 369 (393)
T PRK15011 300 LMAHS--------PAILLGLQLLNAIYIGILGGIG-MLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY 369 (393)
T ss_pred HHHhh--------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11111 2222222222222222222222 36678888864 89999999999999999999999999887444
Q ss_pred chhhHHHHhhHHHhhheeeeccc
Q 018767 312 GTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
...+.......+.+++.+++.||
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 370 HAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 33333333333444444444443
No 64
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.88 E-value=1.4e-21 Score=165.32 Aligned_cols=257 Identities=14% Similarity=0.085 Sum_probs=163.6
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHhhchHHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILALTGLVPCVL 77 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~~~~~~~~~ 77 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..++|.+++.+ +||+.|++.++..++
T Consensus 97 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 97 HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVL 176 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 36778899999999999888899999999999999999999999999999999999888776 899999988776665
Q ss_pred HH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 78 LL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 78 ~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
.. +..++.||.+. ++. +++.+.++++.++++............
T Consensus 177 ~~i~~~~~~~~~~~-----~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
T PRK11646 177 AAAFNAWLLPAYKL-----STV-------------------------------RTPVREGMTRVLRDKRFVTYVLTLTGY 220 (400)
T ss_pred HHHHHHHhCCcccc-----ccc-------------------------------chhhHHHHHHHHcCchHHHHHHHHHHH
Confidence 43 33444555210 000 000111344555554433222221111
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhc-ccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMD-KSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d-~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
.. .......+.|.+.++.+.++.. .......+....+....+++.| |++.++.+..+..+..++...+....
T Consensus 221 ~~----~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~- 295 (400)
T PRK11646 221 YM----LAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS- 295 (400)
T ss_pred HH----HHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh-
Confidence 11 1122334567766665555433 3344444445444444455554 56656555566555555544443221
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS 309 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 309 (350)
+ .+.......++..+......+.. +++.|..|++.|+++.|+.+....+|..++|.+.|.+.+++
T Consensus 296 --~--------~~~~~~~~~l~~~g~~~~~p~~~-~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 296 --N--------LQQLFTLICLFYIGSIIAEPARE-TLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred --h--------HHHHHHHHHHHHHHHHHHHccHH-HHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 1 12222222333333333333444 88899999999999999999999999999999999999874
No 65
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=4.6e-21 Score=162.76 Aligned_cols=303 Identities=12% Similarity=0.100 Sum_probs=177.8
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+ |||+.|++.++..+
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~ 181 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGL 181 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 46788999999999999877777888999999999999999999999999999998888755 89999999888777
Q ss_pred HHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..+. .+.+||+++. +++. .+. + ....+++++++++..+...+...+
T Consensus 182 i~~~~~~~~lp~~~~~---~~~~--------------~~~-~--------------~~~~~~~~ll~~~~~~~~~l~~~~ 229 (413)
T PRK15403 182 IAFVGLLLAMPETVKR---GAVP--------------FSA-K--------------SVLRDFRNVFRNRLFLTGAATLSL 229 (413)
T ss_pred HHHHHHHHhCCCCccc---cCCC--------------CCh-H--------------HHHHHHHHHHcCHHHHHHHHHHHH
Confidence 75543 5567887531 0000 000 0 001234566676544443333222
Q ss_pred HHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
... .......+.|.+.++ .+.+..+ ........+.++++.+.+++.++..+++.......+..++..++....
T Consensus 230 ~~~----~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~ 305 (413)
T PRK15403 230 SYI----PMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGN 305 (413)
T ss_pred HHH----HHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 222 233444456666655 4676655 445556667777777787766554444443332233333333332221
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSG 312 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 312 (350)
....+. .+.......++..+.+....... ...-+. ....+|++.++.+.....+...++...+++.+++...
T Consensus 306 ~~~~~~------~~~~~~~~~l~~~G~~~~~p~~~-~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~ 377 (413)
T PRK15403 306 LLWPHV------WLWSVLGTSLYAFGIGLIFPTLF-RFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRL 377 (413)
T ss_pred HHcccc------HHHHHHHHHHHHHHHHHHhHHHH-HHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 111110 11223333444444444333332 222221 2223799999999999999999999999988776666
Q ss_pred hhhHHHHhhHHHhhheeeecccCCCCCHHHHHHhhhc
Q 018767 313 TFFIYSAFSVITVLFVAKFVPETKGKTLEQIQASINK 349 (350)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (350)
.+....++..+.... .+.++.++.+.+|..|..||
T Consensus 378 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 412 (413)
T PRK15403 378 PFHLLAVVAGVIVVF--TLAGLLNRVRQHQAAELAEE 412 (413)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHhhhhhhhhhhHhhc
Confidence 665555554443332 22233333344444444444
No 66
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=2.6e-21 Score=163.27 Aligned_cols=259 Identities=16% Similarity=0.204 Sum_probs=160.3
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+ +||+.|++.++..+
T Consensus 77 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (377)
T PRK11102 77 QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAI 156 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999887755 89999998777766
Q ss_pred HH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+. ++..+++||+++. +++ + +.+. + +...++++.++++......+...+
T Consensus 157 ~~~~~~~~~~~~~~~~---~~~-~------------~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 205 (377)
T PRK11102 157 LAAALVFFFIPETLPK---ERR-Q------------PFHL-R--------------TTIRNFASLFRHKRVLGYMLASGF 205 (377)
T ss_pred HHHHHHHHhCCccCcc---ccc-C------------CCCh-H--------------HHHHHHHHHHcChHHHHHHHHHHH
Confidence 64 4445667776421 000 0 0000 0 001133445555433322222111
Q ss_pred HHHHHhhcchhhhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
..........+.|.+ .+..+.+..+ .......++.+++.++.+++.||+|||+.+..+..+..+..+.+....
T Consensus 206 ----~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
T PRK11102 206 ----SFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSA 281 (377)
T ss_pred ----HHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222333333443 4456777655 666777888899999999999999999988877765444433332221
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHH-HHHHHHHHHhH
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNW-SGAWAVSYTFN 303 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~~~~ 303 (350)
..+.. .+.................... .....|..| +.++++.++.+.... +|..+++.+.+
T Consensus 282 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 282 LLDLG-------FWALVVGVAAFVGCVSMISSNA-MAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHhhh-------HHHHHHHHHHHHHHHHHhhHHH-HHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11110 1222222223333333322233 356777776 678999998877643 55656665543
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=3.8e-21 Score=162.97 Aligned_cols=252 Identities=18% Similarity=0.191 Sum_probs=152.1
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
|++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+ +||+.|++.++..++
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i 169 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGIL 169 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHH
Confidence 5667889999999999999999999999999999999999999999888888888877644 899999988776666
Q ss_pred H-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 78 L-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 78 ~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
. ++....+||+++. +++.+ .......++.++++..........+.
T Consensus 170 ~~~~~~~~~~~~~~~---~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (392)
T PRK10473 170 VLLLSLFILKETRPA---RAPAA-------------------------------SSKPRENSESLLNRFFLSRLVITTLS 215 (392)
T ss_pred HHHHHHHHcCCCCCc---ccCCc-------------------------------cchHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4 3445567776421 00000 00001122334444333222222221
Q ss_pred HHHHhhcchhhhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
... ......+.|.+ .++.|.+... .......++.+++.++.+++.||+|||+.+..+..+..++.+.+.....
T Consensus 216 ~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 216 VTV----ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHH----HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 11222333443 3456776654 5566778888999999999999999999988887777666665543321
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.............+.+.+... ....+..|.+.|+ +.......++..+++.+.+.+.+.
T Consensus 292 -----------~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~ 349 (392)
T PRK10473 292 -----------HAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAV 349 (392)
T ss_pred -----------HHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222222222233332222 2334445544442 333333445556666666666654
No 68
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=2.7e-22 Score=172.35 Aligned_cols=295 Identities=14% Similarity=0.024 Sum_probs=168.3
Q ss_pred Cceehhh-hHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 2 DLCYLTL-EDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~-~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
|++.+++ .|+++|++.+...+...+++.|+++ ++|+++.++...+..+|..+++++++.+ |||+.|++.+++.+
T Consensus 106 ~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~ 184 (455)
T TIGR00892 106 NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLL 184 (455)
T ss_pred hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 4556654 5799999999877788888899985 7899999999999999999888887755 89999999888776
Q ss_pred HHHHHHhcc-CCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LLLVGLCFV-PESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~~~~~~~~-~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+..+..+++ ++.+... +.+.++ . +...+++.. ++. +.+ ...++..+....+.++++..+......+
T Consensus 185 ~~~v~~~~~~~~~~~~~--~~~~~~-~---~~~~~~~~~-~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 251 (455)
T TIGR00892 185 HCCVCGALMRPVGPSQR--VSKSKS-K---EGLPPDGST-KKL--SKK---STAEKINRFLDFSLFTHRGFLVYLSGNV- 251 (455)
T ss_pred HHHHHHHHhCCCCcccc--cccccc-c---ccCCCCCcc-ccc--ccc---chhhhhhhhcchHHhcCchHHHHHHHHH-
Confidence 654443333 3322110 000000 0 000000000 000 000 0000000100113455544332222222
Q ss_pred HHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhccc--CCceeehhhhHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKS--GRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~--grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
...........+.+.+.++.+.+... ......+++.++++++.|++.||. ++|+...++......+...+..
T Consensus 252 ---l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~- 327 (455)
T TIGR00892 252 ---IMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC- 327 (455)
T ss_pred ---HHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH-
Confidence 22222334445666666777777655 566677888888999999999974 3333333322222111111111
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh--
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS-- 309 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-- 309 (350)
....+ .+...+...+.+.+.+... +...+.+.|.+|++.++++.|+++....+|+.++|.+.|.+.+..
T Consensus 328 ~~~~~--------~~~~~i~~~~~G~~~g~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~ 398 (455)
T TIGR00892 328 ALAGD--------YTGLVIYCIFFGLSFGSVG-ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKN 398 (455)
T ss_pred HHhch--------HHHHHHHHHHHHHHhchHH-HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCC
Confidence 11111 2333333444444433333 344488889999999999999999999999999999999988763
Q ss_pred ccchhhHHHHhhHH
Q 018767 310 SSGTFFIYSAFSVI 323 (350)
Q Consensus 310 ~~~~~~~~~~~~~~ 323 (350)
+...+.+.+++.++
T Consensus 399 ~~~~f~~~~~~~li 412 (455)
T TIGR00892 399 YKYIFYASGSIVVS 412 (455)
T ss_pred cchHHHHhhHHHHH
Confidence 33444444444333
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.88 E-value=6.1e-21 Score=160.85 Aligned_cols=271 Identities=13% Similarity=0.052 Sum_probs=174.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|++.|++.+...+...+++.++ +++|++..+......++|..++|++++.+ |||..|++.++..+
T Consensus 92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 92 HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 3677888999999999998999888888876 45678888888888888888888888765 99999988776554
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+..+...+.||.++ +++.++ +.++...++++++|++..+......++.
T Consensus 170 ~~~~~~~~~~~~~~----~~~~~~----------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~ 217 (382)
T PRK11128 170 SMLLGQLLRPTIMP----QGESRQ----------------------------QESAGWPAWKALLKEPTVWRFLLCVSLL 217 (382)
T ss_pred HHHHHHHccCCCCC----cccccc----------------------------ccccccchHHHHHcChhHHHHHHHHHHH
Confidence 44444444555321 000000 0001123567778776555444433333
Q ss_pred HHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 157 VLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
... ......+.+.+.++.+.+... .......+..++..++.+++.||+++|+.+..+.....+....+...
T Consensus 218 ~~~----~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~--- 290 (382)
T PRK11128 218 QGS----HAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST--- 290 (382)
T ss_pred HHH----hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh---
Confidence 222 223334445555677777654 45556667788888999999999999999888877776665544322
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHH-HHHHHHHHHHHHHhHHHHhhhccch
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVV-LVNWSGAWAVSYTFNFLMSWSSSGT 313 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~~~ 313 (350)
++ .+.......+.+...+....... .+..+. +++++++..+..+ ....+|..++|.+.|.+.|..+...
T Consensus 291 ~~--------~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~ 360 (382)
T PRK11128 291 TA--------LPWLIVIQILHCGTFTVCHLAAM-RYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAGV 360 (382)
T ss_pred hh--------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 11 34444444455555554444444 666676 5555788888876 4456777899999999999854444
Q ss_pred hhHHHHhhH
Q 018767 314 FFIYSAFSV 322 (350)
Q Consensus 314 ~~~~~~~~~ 322 (350)
++..+++.+
T Consensus 361 ~~~~~~~~~ 369 (382)
T PRK11128 361 FWVMALVAL 369 (382)
T ss_pred HHHHHHHHH
Confidence 444444433
No 70
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.87 E-value=6.6e-21 Score=161.77 Aligned_cols=277 Identities=13% Similarity=0.033 Sum_probs=165.3
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC-----chhhHHHhhchHHHHH
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI-----IPWRILALTGLVPCVL 77 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~-----~~Wr~~f~~~~~~~~~ 77 (350)
++.+.+..++.++..+...+...+++.|+.|+|||+++.++...+..+|.++++.++.. .|||..|++.++..++
T Consensus 94 ~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~ 173 (402)
T PRK11902 94 LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLA 173 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 55677788888888888899999999999999999999999999999999998875543 3899999998777666
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
..+..+++||+++.. ++.++. .+ +.+.+++++++++..+.......+..
T Consensus 174 ~~l~~~~~~e~~~~~---~~~~~~-----------------~~-----------~~~~~~~~l~~~~~~~~~l~~~~l~~ 222 (402)
T PRK11902 174 GALTTLWAPEPEVPA---RPPRSL-----------------GE-----------AVVGPLRDFFSRRGAWALLLLIVLYK 222 (402)
T ss_pred HHHHHHhcCCCcccc---cccchh-----------------HH-----------HHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 555556677765310 000000 00 01124566777776555544433333
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCch--HHHHH-HHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGK--LGTIL-YACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
..... ......+.+.++.|.+... ..... ..++.+++.++++++.||+|||+.+..+..+..+..+.+......
T Consensus 223 ~~~~~---~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~ 299 (402)
T PRK11902 223 LGDAF---AGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT 299 (402)
T ss_pred hHHHH---HHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22111 1122334455567777655 23222 234578899999999999999988776666555544333222221
Q ss_pred cccccccCchhHHHHHHHHH---HHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhcc
Q 018767 235 KGQNMFLDWVPVLAVGGILI---YIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSS 311 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 311 (350)
.+ + .+.......+ ..+.......+....++.+.+|.+. .+..+....++...++.+.|.+.+..++
T Consensus 300 ~~-~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~ 368 (402)
T PRK11902 300 PK-H------LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGW 368 (402)
T ss_pred CC-c------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 11 1 1222222211 1112222222333366666666544 4555556667777667788998887544
Q ss_pred ch-hhHHHHhhHHH
Q 018767 312 GT-FFIYSAFSVIT 324 (350)
Q Consensus 312 ~~-~~~~~~~~~~~ 324 (350)
.. +...+.++.+.
T Consensus 369 ~~~f~~~~~~~~~~ 382 (402)
T PRK11902 369 PGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 44 44444443333
No 71
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=180.50 Aligned_cols=275 Identities=11% Similarity=-0.058 Sum_probs=182.5
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.++++|+++|++.+...|...+++.|++++++|++++++.+++.++|.++||++++.+ +|++.|+..++..+
T Consensus 106 ~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~ 185 (1140)
T PRK06814 106 NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAV 185 (1140)
T ss_pred hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999877 89999966666666
Q ss_pred HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHH
Q 018767 77 LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLM 156 (350)
Q Consensus 77 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+.++..+++|+++.- .++...+ .. ...+ ....++.+.+++..+...+...+.
T Consensus 186 ~~~~~~~~~~~~~~~--~~~~~~~------------~~---~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1140)
T PRK06814 186 LGWLASLFIPKTGNA--APDLKID------------RN---IIRS-----------TITLLKYAKADKRIWLAILGISWF 237 (1140)
T ss_pred HHHHHHhhCCCCCCC--CCCCeec------------cc---hHHH-----------HHHHHHHHhcCchHHHHHHHHHHH
Confidence 666666677775420 0000000 00 0000 011345555655544444433333
Q ss_pred HHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
.+. ...+..+.|.+.++ .+.+... .......++.+++.++.|++.|+.++++.+..+.++..++.+.+.+...
T Consensus 238 ~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (1140)
T PRK06814 238 WLV----GAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASS 313 (1140)
T ss_pred HHH----HHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccc
Confidence 222 23333455655544 5666554 6677888899999999999999888777776666555554443332100
Q ss_pred hccc-cc--------ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 234 LKGQ-NM--------FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 234 ~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.... .. ......+...+..++++.+.+....+.. +++.+..|++.||++.|+.++...++..+++.+.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~ 392 (1140)
T PRK06814 314 SVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLF-AALQAWANPAHRARVIAANNVLNAAFMVAGTIILAL 392 (1140)
T ss_pred ccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHH-HHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 0000023334444444544444444544 899999999999999999999999999999999998
Q ss_pred HHhh
Q 018767 305 LMSW 308 (350)
Q Consensus 305 l~~~ 308 (350)
+.+.
T Consensus 393 l~~~ 396 (1140)
T PRK06814 393 LQAL 396 (1140)
T ss_pred HHHh
Confidence 8754
No 72
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=4.2e-22 Score=160.80 Aligned_cols=272 Identities=18% Similarity=0.182 Sum_probs=164.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhchHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTGLVPCV 76 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~~~~~~ 76 (350)
.||+++++|.+.|+|++...|.++.+++|.+|+++|++++++++.+..+|..+|.+.+..+ .|||.|++.+++++
T Consensus 120 ~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~v 199 (493)
T KOG1330|consen 120 HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGV 199 (493)
T ss_pred HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHH
Confidence 4789999999999999999999999999999999999999999999999999999888877 49999999999888
Q ss_pred HH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+. ++.+++++|+++- ..++. .++++. .+......++.+...+++..+...+....
T Consensus 200 i~~~L~~~f~~eP~rg-----a~~~~-------~~~~~~------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a 255 (493)
T KOG1330|consen 200 IVGLLVFLFVREPERG-----ARDEV-------DGENKM------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIA 255 (493)
T ss_pred HHHHHHHhhccCcccc-----ccccc-------ccCCcC------------CCCccchHHHHHHHHccCceeeehHHHHH
Confidence 85 5556677775431 11100 000000 00011111223333443433333333333
Q ss_pred HHHHHhhcchhhhhhHHH----HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCc----eeehhhhHHHHHH-
Q 018767 156 MVLQQFVGINGIGFYTSE----TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRR----PLIMISAAGTFLG- 224 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr----~~~~~~~~~~~~~- 224 (350)
..+. ...++++.|. ..+-.+.+... ....+...++.+|.+++|.++||+.|+ .......+....+
T Consensus 256 ~~fv----~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~ 331 (493)
T KOG1330|consen 256 AQFV----IGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGA 331 (493)
T ss_pred HHHh----ccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhh
Confidence 3332 2333444443 33334434333 777788888999999999999994321 1222222222211
Q ss_pred --HHHHHHHHHhcccccccCchhHHHHHHHHHHHHH-HhhcccchhhhhhcccCCcchhhhHhHHHHHHHH-HHHHHHHH
Q 018767 225 --CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAF-FSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNW-SGAWAVSY 300 (350)
Q Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~~~ 300 (350)
.+.+.......... .....+.+.+++.. ....+.+.. -+..|+.|++.|.++.++...+.. +|.+-+|+
T Consensus 332 ~~s~~~L~~~~~~~~~------s~~~~~il~~~g~~~~~~~~a~n~-~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ 404 (493)
T KOG1330|consen 332 PLSIPFLFLFPAFTSS------SMIFGLILFLVGETISWFNWATNN-PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPY 404 (493)
T ss_pred hHHHHHHHHHHhhhhH------HHHHHHHHHHHHHHHHhccccccc-ceeeEecCcccccHHHHHHHHHHHHhccCCCcc
Confidence 11111111111111 12222222223322 233333343 778899999999999999888755 46666677
Q ss_pred HhHHHHhh
Q 018767 301 TFNFLMSW 308 (350)
Q Consensus 301 ~~~~l~~~ 308 (350)
+.|.+.+.
T Consensus 405 ivGilsd~ 412 (493)
T KOG1330|consen 405 IVGILSDK 412 (493)
T ss_pred eehhHHHH
Confidence 99988875
No 73
>PRK10054 putative transporter; Provisional
Probab=99.86 E-value=8.5e-21 Score=160.26 Aligned_cols=277 Identities=15% Similarity=0.085 Sum_probs=170.4
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHhhchHHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILALTGLVPCVLL 78 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~~~~~~~~~~ 78 (350)
|++.++++|++.|.+.+...+...++..|..|+++|+++.++.....++|..++|.+++.+ +||.+|++.++..++.
T Consensus 95 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~ 174 (395)
T PRK10054 95 NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFP 174 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHH
Confidence 5667788899999888888888999999999999999999999999999999999888876 8999999887776665
Q ss_pred HH-HHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 79 LV-GLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 79 ~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
.+ ..+++||+++. ++.++ + +..+.++.++++..+.......+..
T Consensus 175 ~i~~~~~~~~~~~~----~~~~~-------------------~------------~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (395)
T PRK10054 175 LVFIQIWVQRSEKA----IATET-------------------G------------SVWSPSVLLQDKALLWFTCSGFLAS 219 (395)
T ss_pred HHHHHHHHhccccc----cccch-------------------h------------hhhhhhhhccCceehHHHHHHHHHH
Confidence 43 34445554310 00000 0 0011244566555444443333322
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhc
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLK 235 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
............+.+.. .+.+.+... .......+.........|++.||.++|+.+..+..+..++...+.... +
T Consensus 220 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 296 (395)
T PRK10054 220 FVSGAFASCISQYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG--N 296 (395)
T ss_pred HHHHHhhhhHHHHHHHh-cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc--h
Confidence 22111111222222221 222222222 334444455556667889999999999988877766666655543211 1
Q ss_pred ccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccc-hh
Q 018767 236 GQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSG-TF 314 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-~~ 314 (350)
+ .+...+...+++.+... ..+...+.+.+..|++.|+++.+..+ ...+|..++|.+.|.+.|+.+.. .+
T Consensus 297 ~--------~~~~~~~~~~~~~g~~~-~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~ 366 (395)
T PRK10054 297 S--------LLLWGMSAAVFTVGEII-YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLF 366 (395)
T ss_pred H--------HHHHHHHHHHHHHHHHH-HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHH
Confidence 1 22223333333333332 23344478889999999999988655 67789999999999999985443 44
Q ss_pred hHHHHhhHHHhh
Q 018767 315 FIYSAFSVITVL 326 (350)
Q Consensus 315 ~~~~~~~~~~~~ 326 (350)
.+.+....+..+
T Consensus 367 ~~~~~~~~~~~~ 378 (395)
T PRK10054 367 VILALAIVAAWL 378 (395)
T ss_pred HHHHHHHHHHHH
Confidence 444444333333
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.85 E-value=4.8e-20 Score=176.67 Aligned_cols=264 Identities=14% Similarity=-0.022 Sum_probs=173.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-------------hhhHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-------------PWRILA 68 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-------------~Wr~~f 68 (350)
+++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+ +|++.+
T Consensus 102 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~ 181 (1146)
T PRK08633 102 WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPA 181 (1146)
T ss_pred cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHH
Confidence 5678999999999999999999999999999999999999999999999999998887755 133444
Q ss_pred hhch-HHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchh
Q 018767 69 LTGL-VPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIR 147 (350)
Q Consensus 69 ~~~~-~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (350)
.+.. ...++.++..+.+||+|+....+.+.++ .. ... .....++.+++++..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~---~~~-----------~~~~~~~~l~~~~~~~ 235 (1146)
T PRK08633 182 GLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK------------YL---FPK-----------LLWRNLKLLRSDRVLW 235 (1146)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCcccccccc------------cc---cHH-----------HHHHHHHHHhcCcHHH
Confidence 3333 3333444555667887642111000000 00 000 0011344556655444
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHH-HHHhCCCCc-h--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHH
Q 018767 148 SVIIGVSLMVLQQFVGINGIGFYTSET-FVQAGLSSG-K--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFL 223 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~ 223 (350)
..++...+.... ......+.|.+ .+..+.+.. . .......++.+++.++.+++.||+++++.+.++.++..+
T Consensus 236 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 236 LAIIGLSYFWFI----SQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHH----HHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHH
Confidence 433333332222 22233344444 455677766 4 666777888899999999999999999888877776666
Q ss_pred HHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhH
Q 018767 224 GCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 303 (350)
+.+.+.... + .+..++..++++.+.+....+.. +++.+..|++.||++.|+.+++..+|..+++.+.+
T Consensus 312 ~~~~~~~~~---~--------~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 312 SLFLLPTAP---S--------LASVLVLFFLFGFSAGLFIVPLN-ALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred HHHHHHHhh---h--------HHHHHHHHHHHHHHHHHhhHHHH-HHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 655553321 1 23333444444444444444444 88899999999999999999999999988888777
Q ss_pred HHHh
Q 018767 304 FLMS 307 (350)
Q Consensus 304 ~l~~ 307 (350)
.+..
T Consensus 380 ~l~~ 383 (1146)
T PRK08633 380 LFSG 383 (1146)
T ss_pred HHHH
Confidence 6654
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.85 E-value=1.8e-20 Score=160.19 Aligned_cols=261 Identities=13% Similarity=0.095 Sum_probs=148.5
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHhhchHHHHHHHHHHhcc-CCChHHHHHhCChHHHHHHHHHHhc
Q 018767 35 NLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILALTGLVPCVLLLVGLCFV-PESPRWLAKVGLDKEFQVALRKLRG 110 (350)
Q Consensus 35 ~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~~~~~~~~~~~~~~~~~-~esp~~~~~~~~~~~~~~~~~~~~~ 110 (350)
+++++..+......++|..+++.+++.+ +||++|++.++..++..+..++. +|.++.... ++++
T Consensus 137 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------- 204 (420)
T PRK09528 137 RRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKV--ANAL---------- 204 (420)
T ss_pred hhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhh--ccch----------
Confidence 4567777888888888888888887766 89999999887777755555444 333210000 0000
Q ss_pred CCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHH
Q 018767 111 KDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTI 188 (350)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 188 (350)
.+++++.+....++.+|++..+...+..................+......+.+.+... ....
T Consensus 205 ---------------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 269 (420)
T PRK09528 205 ---------------GANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNS 269 (420)
T ss_pred ---------------hcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Confidence 00001111123344566654443333222221111110111222222222222333222 4555
Q ss_pred HHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhh
Q 018767 189 LYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPW 268 (350)
Q Consensus 189 ~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (350)
...++..++.++.|++.||+|||+.+..+..+..+...++... ++ .+.......+.+.......... .
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~---~~--------~~~~~~~~~l~g~~~~~~~~~~-~ 337 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA---TG--------PLEVSILKLLHAFEVPFLLVGV-F 337 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc---cc--------HHHHHHHHHHHHHHHHHHHHHH-H
Confidence 5667778899999999999999999888777776665555322 11 2333332333333332222223 3
Q ss_pred hhhcccCCcchhhhHhHH-HHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHHhhheeeeccc
Q 018767 269 VIMSEIFPINIKGVAGSL-VVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 269 ~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
.++.|.+|++.|++..+. .+....+|..++|.+.|.+.+. ++...+...+++.++..++.+...++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 778888999999888765 5777889999999999999987 44555666666665555555444444
No 76
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.85 E-value=1.3e-19 Score=151.55 Aligned_cols=255 Identities=15% Similarity=0.101 Sum_probs=161.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc------hhhHHHhhchHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------PWRILALTGLVP 74 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------~Wr~~f~~~~~~ 74 (350)
++++.+++.|+++|++.+...+....++.|++| ++|+++.++...+.++|..+++.++..+ +||+.|...++.
T Consensus 85 ~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~ 163 (355)
T TIGR00896 85 PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALP 163 (355)
T ss_pred ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 356778899999999999888888889999886 6899999999999999888887776544 399998776554
Q ss_pred HHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHH
Q 018767 75 CVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVS 154 (350)
Q Consensus 75 ~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (350)
.++..+ .++||.++ +++. +++..+...++.+|++..+...+...
T Consensus 164 ~~~~~~--~~~~~~~~----~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 164 ALLALL--AWIPQVRR----RVAA------------------------------NQTTTRLTPVRIWRSPLAWQVTVFFG 207 (355)
T ss_pred HHHHHH--HHhhhhcc----ccCC------------------------------CCCCCCCCCchhhcCHhHHHHHHHHH
Confidence 443322 23344321 0000 00001122344555544333222222
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC-CceeehhhhHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSG-RRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g-rr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+ ....+.....+.|.+.++.+.+... .......++.++++++.|++.||++ ||+.+..+..+..++.+.+...
T Consensus 208 ~----~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
T TIGR00896 208 L----QSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA 283 (355)
T ss_pred H----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh
Confidence 1 2222344556778777777777655 6677788899999999999999994 5556666666666655544322
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhccc-CCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEI-FPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS 309 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 309 (350)
. . ..... ...+++.+.+... +...+.+.+. .+++.++...++.+...+++..++|.+.|.+.|+.
T Consensus 284 ~---~--------~~~~~-~~~l~g~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 284 P---M--------HGLWA-WALVLGLGQGGAF-PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred h---h--------hHHHH-HHHHHHHhhhhHh-HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 01111 2223333333322 3322444444 44566789999999999999999999999998874
No 77
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.84 E-value=1.1e-19 Score=152.06 Aligned_cols=257 Identities=12% Similarity=0.033 Sum_probs=159.2
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----h--------hhHHHhh
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----P--------WRILALT 70 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~--------Wr~~f~~ 70 (350)
.+.+....++.+.+.+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+ + ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 344666777888888888899999999999999999999999999999999999887544 6 9999999
Q ss_pred chHHHHHHHHHHh-ccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHH
Q 018767 71 GLVPCVLLLVGLC-FVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSV 149 (350)
Q Consensus 71 ~~~~~~~~~~~~~-~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (350)
.++..++..+..+ ..||+++. +++.+ ++..+ .+.+++++++++..++.
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~---~~~~~-----------------~~~~~-----------~~~~~~~~~~~~~~~~~ 211 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQED---ASVPK-----------------PLTQA-----------VLKPIREFFQRKNMIQA 211 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcc---cccch-----------------hHHHH-----------HHHHHHHHHHhcCchHH
Confidence 8887777555544 35664320 00000 00000 01234555555442223
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHH-HHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHH
Q 018767 150 IIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYA-CVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCF 226 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 226 (350)
........+.. ........+.|.+.++.|.+..+ ......+ +..+++.+++|++.||+|||+.+..+.++..+...
T Consensus 212 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 212 LLLLLLIVLYK-LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 32222222222 22334445566666667777655 2333333 56778999999999999999998877777666555
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHH
Q 018767 227 LAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNW 292 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 292 (350)
.+..........+......+.......+...+.+....+. .++..|.+|+++||+..|+.+...+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAF-VAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHH-HHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4433211110000000001223333333344444444444 4999999999999999999887654
No 78
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=1.6e-19 Score=154.18 Aligned_cols=258 Identities=14% Similarity=0.142 Sum_probs=162.0
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC-------------------
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI------------------- 61 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~------------------- 61 (350)
+|++.++++|+++|+|.|...+....++.|+.|+++|.+.+++.+..+.+|..+++.++..
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~ 194 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTP 194 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccCh
Confidence 4678899999999999999999999999998877777778899999999998888876431
Q ss_pred -----------chhhHHHhh-chHHHHHHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Q 018767 62 -----------IPWRILALT-GLVPCVLLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILT 128 (350)
Q Consensus 62 -----------~~Wr~~f~~-~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (350)
.+||++|+. ..+..++.++. ....||.+. ++ +.+ +
T Consensus 195 ~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~---~~-~~~----------------------------~ 242 (438)
T PRK10133 195 EQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS---DN-HSD----------------------------A 242 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---cc-ccc----------------------------c
Confidence 156666754 33333333222 333454321 00 000 0
Q ss_pred ccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHH-HH-HhCCCCch--HHHHHHHHHhhhHHhhHhhh
Q 018767 129 LRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSET-FV-QAGLSSGK--LGTILYACVQVPITVVGAFL 204 (350)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l 204 (350)
++.+...+.+++++++..+...+..++.... ......|.+.+ .+ ..+.++.. .......++.++++++++++
T Consensus 243 ~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l 318 (438)
T PRK10133 243 KQGSFSASLSRLARIRHWRWAVLAQFCYVGA----QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWL 318 (438)
T ss_pred cccchhhhHHHHHhCchHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001112345667766554443333222222 22222344433 33 45777665 67788888999999999999
Q ss_pred hcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHh
Q 018767 205 MDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAG 284 (350)
Q Consensus 205 ~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 284 (350)
.||+|||+++..+..+..+.+.+... ... . ..+....+.+.+.+..++... +...|..|++ .+++.
T Consensus 319 ~~r~g~~~~l~~~~~~~~~~~~~~~~---~~~--------~-~~~~~~~l~glg~~~i~P~~~-s~a~~~~~~~-~~~as 384 (438)
T PRK10133 319 ISRFAPHKVLAAYALIAMALCLISAF---AGG--------H-VGLIALTLCSAFMSIQYPTIF-SLGIKNLGQD-TKYGS 384 (438)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHH---cCC--------h-HHHHHHHHHHHHHHHHHHHHH-HHHHcccchh-hccch
Confidence 99999999888776665544433321 111 1 123334445555555554444 8888887764 57777
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHhhh
Q 018767 285 SLVVLVNWSGAWAVSYTFNFLMSWS 309 (350)
Q Consensus 285 ~~~~~~~~~g~~~~~~~~~~l~~~~ 309 (350)
++.. ...+|+.++|.+.|.+.+..
T Consensus 385 ~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 385 SFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred hHHh-HHhccchHHHHHHHHHHHhc
Confidence 7776 45578889999999988863
No 79
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=3.3e-19 Score=150.84 Aligned_cols=253 Identities=15% Similarity=0.092 Sum_probs=166.1
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-------------------
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------------------- 62 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------------------- 62 (350)
|++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.++..+
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~ 172 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPE 172 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHH
Confidence 6788999999999999999999999999999999999999999999999998888775433
Q ss_pred -----------hhhHHHhhchHHHHHHHHHHhc--cCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhc
Q 018767 63 -----------PWRILALTGLVPCVLLLVGLCF--VPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTL 129 (350)
Q Consensus 63 -----------~Wr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (350)
+||++|++.+++.++..+...+ .||.++ + ++ +
T Consensus 173 ~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~--~~----------------------------~ 217 (410)
T TIGR00885 173 ELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S--DA----------------------------K 217 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c--cc----------------------------c
Confidence 4999998877766654433322 443210 0 00 0
Q ss_pred cCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch----HHHHHHHHHhhhHHhhHhhhh
Q 018767 130 RSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK----LGTILYACVQVPITVVGAFLM 205 (350)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~ 205 (350)
+.+...+.++.+|++..+...+..++..... .....+.+.+.++.+.+.+. ........+..+|.++++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e----~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~ 293 (410)
T TIGR00885 218 QISFSASLSRLARIRHYREGVIAQFFYVGVQ----IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLI 293 (410)
T ss_pred cccchhhHHHHHhChhHHHHHHHHHHHHHHH----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001113345566655444444433333332 22334555555543322221 234444567789999999999
Q ss_pred cccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhH
Q 018767 206 DKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGS 285 (350)
Q Consensus 206 d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 285 (350)
||+++|+.+.+...+..+..++... .++ ........+.+.+.+..+ |..++...+..+++.+..+.+
T Consensus 294 ~r~~~~~~l~i~~~~~~~~~ll~~~---~~~---------~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 294 SYLAAHKVLMAYAIIGMALCLGSIF---AGG---------HVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHH---cCC---------hHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHH
Confidence 9999999887777666666555532 111 222344445555555555 555699999998876555555
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhh
Q 018767 286 LVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
+.... +|+.+.|.+.|.+.|.
T Consensus 361 l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 361 LVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHH--hccchHHHHHHHHHHH
Confidence 55544 9999999999999984
No 80
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.83 E-value=4.5e-19 Score=150.41 Aligned_cols=259 Identities=17% Similarity=0.069 Sum_probs=159.9
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|++.+++.|+++|++.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+ +||+.|++.++..+
T Consensus 94 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~ 173 (394)
T PRK11652 94 HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGA 173 (394)
T ss_pred ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Confidence 36778899999999999888888888999999999999999999999998888888777654 89999998777665
Q ss_pred HH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 77 LL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 77 ~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+. .+..++.||+++.. ++ + . +.+.++++.++++..+........
T Consensus 174 ~~~~~~~~~~~~~~~~~---~~--~----------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 218 (394)
T PRK11652 174 GVTFSMARWMPETRPAD---AR--R----------------T--------------RVLASYRTLLSNRRFNCYLLMLIG 218 (394)
T ss_pred HHHHHHHHhCCccCccc---cc--h----------------h--------------HHHHHHHHHHcChHHHHHHHHHHH
Confidence 53 44455678865210 00 0 0 001234455555544433332222
Q ss_pred HHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
... .......+.+.+.++ .+.+..+ .......++.+++..+.+++.||.+++... ......++.+......
T Consensus 219 ~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~ 292 (394)
T PRK11652 219 TLA----GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPG 292 (394)
T ss_pred HHH----HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 211 122223333444444 6666544 445556677778888888888888733222 2222222222221111
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.....+ .+.......+.+.+.+...... .++..|.+|+ .++++.++.+....+|+.+++.+.+.+.+.
T Consensus 293 ~~~~~~------~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 293 WFGVMN------VWTLLVPAALFFFGAGMLFPLA-TSGAMEPFPY-LAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred Hhcccc------HHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccc-cchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 111101 2333333344444444434334 4777888874 689999999999999999999999887654
No 81
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.83 E-value=2.4e-19 Score=152.28 Aligned_cols=292 Identities=10% Similarity=0.033 Sum_probs=168.8
Q ss_pred CceehhhhHhhhhhccccccchhhhhhh--------cccCccchhhHHhHHHHHHHHHHHHHHHhcCCchhhHHHhhchH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIA--------EIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSIIPWRILALTGLV 73 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~Wr~~f~~~~~ 73 (350)
|++.+.+.|++.|++.+...+...++.. |......|.+..|. .++.+|+.+++.++...+|+ +|++.++
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~--lG~~ig~~l~g~l~~~~~~~-~f~~~~~ 167 (418)
T TIGR00889 91 TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT--IGFIAAMWAVSLLDIELSNI-QLYITAG 167 (418)
T ss_pred CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh--HHHHHHHHHHHHhcccchhH-HHHHHHH
Confidence 5677889999999987777666555432 32333345555553 34455555554442222355 3555555
Q ss_pred HHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 74 PCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 74 ~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
..++..+..+++||+|+- +++.++ + .. +..+.+.++.+|++.....+...
T Consensus 168 ~~~~~~~~~~~~~e~~~~---~~~~~~-------------~----~~----------~~~~~~~~~~~k~~~~~~~~~~~ 217 (418)
T TIGR00889 168 SSALLGVFALTLPDIPVA---KSTAKM-------------S----IK----------VMLGLDAFILFKNKRMAIFFFFS 217 (418)
T ss_pred HHHHHHHHHhcCCCCCCC---cccccc-------------C----HH----------HHhhhhHHHHhcCCCeeeHHHHH
Confidence 555544455678887631 000000 0 00 00011234456665544443333
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCC--------c--hHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSS--------G--KLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFL 223 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~ 223 (350)
++.... ......+.+.+.++.+.++ . ........+..+++.+..|++.||+|||+.+..+.++..+
T Consensus 218 ~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v 293 (418)
T TIGR00889 218 MLLGAP----LQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWAL 293 (418)
T ss_pred HHHHhH----HHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 332221 1222344455555555432 1 1556667778888899999999999999999988887777
Q ss_pred HHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHH-HHHHHHHHHHHHHh
Q 018767 224 GCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVV-LVNWSGAWAVSYTF 302 (350)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~ 302 (350)
....+... .... +..+...+...+.+.+.+...... ..++.|.+|++.|+++.|+.+ ....+|..++|.+.
T Consensus 294 ~~~l~~~~---~~~~----~~~~~l~l~~~l~g~~~~~~~~~~-~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 294 RFGFFAYG---DPEY----FGYALLFLSMIVYGCAFDFFNISG-SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHHHHc---Ccch----hhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 65554331 1100 001222333334444444333333 378899999999999999997 56789999999999
Q ss_pred HHHHhhh-------ccchhhHHHHhhHHHhhheeeecccCCCC
Q 018767 303 NFLMSWS-------SSGTFFIYSAFSVITVLFVAKFVPETKGK 338 (350)
Q Consensus 303 ~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (350)
|.+.++. +...+.+.+++..+.+++.+++.+|+++.
T Consensus 366 G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 366 GVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 9998863 22345566666666667677777776544
No 82
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.82 E-value=7.5e-19 Score=142.77 Aligned_cols=255 Identities=14% Similarity=0.095 Sum_probs=164.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-------------------
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------------------- 62 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------------------- 62 (350)
+|+.+++.-++.|.|.+...+....++++..++|++.+.+++.+..+++|..++|.+++.+
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 6788999999999999999999999999999999999999999999999999999887732
Q ss_pred -hhhHHHhhchHHHHHHHHHHh--ccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhh
Q 018767 63 -PWRILALTGLVPCVLLLVGLC--FVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRD 139 (350)
Q Consensus 63 -~Wr~~f~~~~~~~~~~~~~~~--~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (350)
+||++|++.+...++..+.+. .+||.++ ++++ + . .+++ ....++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~----------------~----~-----~~~~--~~~~~~ 135 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA----------------R----V-----SSGD--TTQKTS 135 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc----------------c----c-----cccc--ccchhh
Confidence 589999865554444333333 3455321 0000 0 0 0000 001112
Q ss_pred hhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH---hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceee
Q 018767 140 LFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ---AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLI 214 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~ 214 (350)
.++++.... ..+..+.....-.....|.+.++.+ .+.++.+ ........+.++|+++.+++.||+|+|+.+
T Consensus 136 ~~~~~~~~l----~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l 211 (310)
T TIGR01272 136 AFQFTHLVL----GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL 211 (310)
T ss_pred HHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 333332222 2223333332334555566666654 3666555 667778888999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHH
Q 018767 215 MISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSG 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 294 (350)
..+..+..++.++.. ..+. ........+.+.+.+..++.. .+...+..|++ .+++.++. ....+|
T Consensus 212 ~~~~~l~~~~~~l~~---~~~~---------~~~~~~~~l~g~~~s~i~P~~-~s~a~~~~~~~-~~~asai~-~~~~~G 276 (310)
T TIGR01272 212 AFNAFLAVLLSIGAA---LTHG---------YVAMWFVLALGLFNSIMFPTI-FSLALNALGRH-TSQGSGIL-CLAIVG 276 (310)
T ss_pred HHHHHHHHHHHHHHH---HcCC---------HHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhh-hhhhHHHH-HHHHhc
Confidence 777666665543332 1111 111223334444444444444 47777877764 46666764 567899
Q ss_pred HHHHHHHhHHHHhh
Q 018767 295 AWAVSYTFNFLMSW 308 (350)
Q Consensus 295 ~~~~~~~~~~l~~~ 308 (350)
+.+.|.+.|.+.|.
T Consensus 277 g~i~P~l~G~lad~ 290 (310)
T TIGR01272 277 GAIVPLLQGSLADC 290 (310)
T ss_pred chHHHHHHHHHHHh
Confidence 99999999999886
No 83
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.82 E-value=2.6e-19 Score=154.10 Aligned_cols=259 Identities=14% Similarity=0.060 Sum_probs=159.4
Q ss_pred eehhhhHhhhhhccccccchhhhhhhccc-CccchhhHHhHHHHHHHHHHHHHHHhc-----------CCchhhHHHhhc
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIA-PRNLRGLLTTLNQLLIVTGSSVAYIIG-----------SIIPWRILALTG 71 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~-----------~~~~Wr~~f~~~ 71 (350)
..+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+. ...+||+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 34567788888888887778888888987 468899999998888777766554332 123799999888
Q ss_pred hHHHHHHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHH
Q 018767 72 LVPCVLLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVI 150 (350)
Q Consensus 72 ~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (350)
+++.++.. +..+.+||+++. .+.++ +++.+....++++++++..+...
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~----~~~~~---------------------------~~~~~~~~~~~~l~~~~~~~~~~ 228 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSE----IPKNI---------------------------EKKLSLKQIFKALFKNDQLLILC 228 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCC----CCccc---------------------------ccCCCHHHHHHHHhCCHHHHHHH
Confidence 87777654 445567775410 00000 00001122345666665544444
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 151 IGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
....+..... .....+.+++.+....+... .......++.+++.++.+++.||+|||+.+..+..+..++.+.+
T Consensus 229 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~ 304 (437)
T TIGR00792 229 LAYLFYNLAF----NIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIF 304 (437)
T ss_pred HHHHHHHHHH----HHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3333332222 22222233332221112222 44555678888999999999999999999888877776665554
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-------cchhhhHhHHHHHHHHHHHHHHHHH
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-------INIKGVAGSLVVLVNWSGAWAVSYT 301 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~ 301 (350)
... .+ + .+.......+.+.+.+.. .+..+++.+|..+ ++.+|.+.|+.++...+|..+++.+
T Consensus 305 ~~~---~~-~------~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 305 FFA---GS-N------LPLILVLIILAGFGQNFV-TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred HHc---ch-h------HHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 321 11 1 122233333333333333 3444577777754 4567999999999999999999999
Q ss_pred hHHHHhh
Q 018767 302 FNFLMSW 308 (350)
Q Consensus 302 ~~~l~~~ 308 (350)
.|.+.+.
T Consensus 374 ~g~ll~~ 380 (437)
T TIGR00792 374 VGLILGI 380 (437)
T ss_pred HHHHHHH
Confidence 9999875
No 84
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.81 E-value=1.7e-19 Score=151.64 Aligned_cols=257 Identities=16% Similarity=0.144 Sum_probs=148.2
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc----C----------CchhhHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG----S----------IIPWRIL 67 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~----~----------~~~Wr~~ 67 (350)
|++.+++.|+++|++.+ ..+....++.|++|+++|+++.++.....++|..+++.++ . ..+||+.
T Consensus 90 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~ 168 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWA 168 (366)
T ss_pred hHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 67788999999999865 4566788999999999999999998865555555554433 2 2379999
Q ss_pred H-hhchHHHH-HHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccc
Q 018767 68 A-LTGLVPCV-LLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKY 145 (350)
Q Consensus 68 f-~~~~~~~~-~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (350)
| +..++... +.++...+.+|+|+. +++.++. +.++... . .+++.....++.++++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~-~-----------~~~~~~~~~~~~~~~~~ 226 (366)
T TIGR00886 169 FVIVPAGILLLPALLIFFVGADTPPG---KPATGKL-------SFKGARW-S-----------VGTGALGDQLKVFRDRH 226 (366)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcc---cccchhc-------ccccccc-c-----------ccchhHHHHHHHHhccc
Confidence 9 44344333 344455566776631 0000000 0000000 0 00000113344555544
Q ss_pred hhHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHH
Q 018767 146 IRSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTF 222 (350)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~ 222 (350)
.+........... .......+.|.+.+ ..+.+..+ .......+..+++.+++|++.||+|||+.+..+.....
T Consensus 227 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 302 (366)
T TIGR00886 227 TWILALLYSVTFG----SFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVA 302 (366)
T ss_pred hhhHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHH
Confidence 3333332222221 23344455565554 45766655 45666778888999999999999999988776665555
Q ss_pred HHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHH
Q 018767 223 LGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSG 294 (350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 294 (350)
.+..++..... ...+ .............+.+.+.... +....|..| +++|++.|+.+..+++|
T Consensus 303 ~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 303 MGAFLVVLGLV-SPLS------LAVFIVLFVALFFFSGAGNGST-FALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHhcCC-Ccch------HHHHHHHHHHHHHHhccccchh-hhcchhhch-hhcccHHHHHHHhccCC
Confidence 54444422111 0001 2222333333344444444443 478888887 57899999999887765
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.81 E-value=1.7e-18 Score=146.82 Aligned_cols=277 Identities=9% Similarity=0.069 Sum_probs=162.4
Q ss_pred hhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHhhchHHHHHHHHHH
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILALTGLVPCVLLLVGL 82 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~~~~~~~~~~~~~~ 82 (350)
+++.|++.|++.+...+....+..|..+ ++++..+......++|..+++.+++.+ +||.+|++.++..++..+..
T Consensus 102 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 102 AIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHH
Confidence 4556888888888888888888777533 344556666666777778888777755 99999999887777754443
Q ss_pred hc-cCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHh
Q 018767 83 CF-VPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQF 161 (350)
Q Consensus 83 ~~-~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (350)
+. .||+|+.. +.+++ . + .++++.+..+.++.+|++..+...+..+....
T Consensus 180 ~~~~~~~~~~~----~~~~~-------~---------------~-~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~--- 229 (396)
T TIGR00882 180 MFAKPKAPSSA----TVANA-------L---------------G-ANASAFSLKLALELFRQRKFWMFVLYVVGVAC--- 229 (396)
T ss_pred HHhCCCCchhh----hhhcc-------c---------------c-cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHH---
Confidence 33 45543210 00000 0 0 00011122345677777654433332222111
Q ss_pred hcchhhhhhHHHHHHHh----CCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhc
Q 018767 162 VGINGIGFYTSETFVQA----GLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLK 235 (350)
Q Consensus 162 ~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
.+.....+.+.+.++. +.+... .......+...++.+..+++.||+|||+.+.++..+..+....... ..
T Consensus 230 -~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~---~~ 305 (396)
T TIGR00882 230 -VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF---AT 305 (396)
T ss_pred -HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh---cC
Confidence 1222222334443332 222222 4455566777888899999999999999988877776665554322 11
Q ss_pred ccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHH-HHHHHHHHHHHHHHHhHHHHhh-hccch
Q 018767 236 GQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSL-VVLVNWSGAWAVSYTFNFLMSW-SSSGT 313 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~-~~~~~ 313 (350)
+ .+.......+.+.+..... .....+..+..|++.++++.+. .+....+|+.+++.+.|.+.+. ++...
T Consensus 306 ~--------~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~ 376 (396)
T TIGR00882 306 T--------ALEVVILKMLHAFEVPFLL-VGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGA 376 (396)
T ss_pred C--------hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHH
Confidence 1 2333333333333322221 1223566777888888887766 5778999999999999999987 54556
Q ss_pred hhHHHHhhHHHhhh
Q 018767 314 FFIYSAFSVITVLF 327 (350)
Q Consensus 314 ~~~~~~~~~~~~~~ 327 (350)
+.+.+++..+.+++
T Consensus 377 f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 377 YLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666655555443
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.80 E-value=3.5e-18 Score=144.65 Aligned_cols=272 Identities=11% Similarity=-0.089 Sum_probs=160.6
Q ss_pred hhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCC----chhhHHHhhchHHHHHHHHHH
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSI----IPWRILALTGLVPCVLLLVGL 82 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~----~~Wr~~f~~~~~~~~~~~~~~ 82 (350)
+..-++.++..+...+...++..|..++++++...+....+..+|.++++..... .|||..|++.++..++..+..
T Consensus 101 ~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 101 VGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3344445555666667777788888888888888888888888888888865443 499999999888777655544
Q ss_pred hccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHhh
Q 018767 83 CFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFV 162 (350)
Q Consensus 83 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (350)
.+++|+++. +++.+ +.+..++++.+|++..+......++.....
T Consensus 181 ~~~~~~~~~---~~~~~-------------------------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~-- 224 (390)
T TIGR02718 181 LWLKDRAVA---SPEAP-------------------------------LARRASLFRFFRRPLAWSLLALALLSAMTA-- 224 (390)
T ss_pred HHcCCCCcC---ccccc-------------------------------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHH--
Confidence 444443210 00000 001123566777666554444333333222
Q ss_pred cchhhhhhHHHHHHHhCCCCch--HHHHHHH-HHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccc
Q 018767 163 GINGIGFYTSETFVQAGLSSGK--LGTILYA-CVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNM 239 (350)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
.....+.+.+.++.|.+.++ ....... ...+++.++.|++.||+|+|+.+..+..+..+...............
T Consensus 225 --~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 301 (390)
T TIGR02718 225 --VSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAP- 301 (390)
T ss_pred --HHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCC-
Confidence 22223445556677888766 3333333 45667788999999999999988876655533322221111100000
Q ss_pred ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCc-chhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhcc-chhhHH
Q 018767 240 FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI-NIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSS-GTFFIY 317 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~~~~~~ 317 (350)
..........+.....+....... +...+..++ +.+++..++.+....+|..++|.+.|.+.+..++ ..+...
T Consensus 302 ----~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~ 376 (390)
T TIGR02718 302 ----GIAVAWSCSAFGSLITGITSVAIY-TAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSG 376 (390)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 011111111222222333333333 555555555 7889999999999999999999999999987544 444444
Q ss_pred HHhhH
Q 018767 318 SAFSV 322 (350)
Q Consensus 318 ~~~~~ 322 (350)
+++..
T Consensus 377 ~~~~l 381 (390)
T TIGR02718 377 TVLAV 381 (390)
T ss_pred HHHHH
Confidence 43333
No 87
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.79 E-value=4.9e-18 Score=146.03 Aligned_cols=271 Identities=16% Similarity=0.115 Sum_probs=180.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
+.+.+++.-++.|++.+...|.-.+++.|..|+++...+.++.+...++..++||.+++.+ |-.+.|.+.++.-++
T Consensus 102 ~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 102 SPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLI 181 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677889999999999999999999999999999999999999999999999999888876 677788887765555
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
.+......+..++ +++..+ ++. . +.-+..++-..+++..+..+....+..
T Consensus 182 ~i~~l~~~~~~~~----~~~~~~-e~~--------------~-----------~~l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 182 SILALLRWKPPPP----PSSLPR-ERF--------------F-----------SALREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHcccccc----ccccch-hhh--------------h-----------hhHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4443333332211 000000 000 0 000112222333333333322222222
Q ss_pred HHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHh
Q 018767 158 LQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
+. ...+...+|.+.+ ..+.+... ......+++.++|+++.+++.+|+++++.+..+.+..+++.+.+++...
T Consensus 232 l~----~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~- 306 (524)
T PF05977_consen 232 LF----ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPS- 306 (524)
T ss_pred Hh----hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchH-
Confidence 11 1222334566554 45665544 7778889999999999999999999998888887777776666644321
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhcc-ch
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSS-GT 313 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-~~ 313 (350)
.+......++.+.+......... +...+..|++.||++.+++.+....+..+|..+.|.+.+..+. ..
T Consensus 307 ----------~~~~~~~l~l~G~~~~~~~~~~~-t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~a 375 (524)
T PF05977_consen 307 ----------FWLALIALFLAGAAWIIANSSLN-TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTA 375 (524)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 23444444444544444444444 8888999999999999999999999999999999999987443 33
Q ss_pred hhHHH
Q 018767 314 FFIYS 318 (350)
Q Consensus 314 ~~~~~ 318 (350)
+.+.+
T Consensus 376 l~~a~ 380 (524)
T PF05977_consen 376 LLIAG 380 (524)
T ss_pred HHHHH
Confidence 43333
No 88
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=3.2e-19 Score=141.35 Aligned_cols=277 Identities=12% Similarity=-0.045 Sum_probs=177.4
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccc-hhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNL-RGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPC 75 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~ 75 (350)
++++++++.|.+||+|.+.....+.++++|.+|+++ |++++|+...+.++|.++||+.|+.+ |.+.+|++.+++.
T Consensus 157 ~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~ 236 (464)
T KOG3764|consen 157 NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVL 236 (464)
T ss_pred chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHH
Confidence 468899999999999999999999999999999765 79999999999999999999999988 9999999999999
Q ss_pred HHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHH
Q 018767 76 VLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSL 155 (350)
Q Consensus 76 ~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++...+.+++-|..+- +.+..++..++++++++++...... .
T Consensus 237 Lld~~L~l~vi~p~~~-----------------------------------~~~~~~~~~~~~~Ll~dP~I~~~ag---a 278 (464)
T KOG3764|consen 237 LLDGALQLLVIEPTEM-----------------------------------DPDSTEQGTPMWSLLMDPYILLIAG---A 278 (464)
T ss_pred HHHHHHHHheeCcccc-----------------------------------CccccccCccHHHHHhCchHhhhhc---c
Confidence 8866665554442110 0001223456777877655332222 1
Q ss_pred HHHHHhhcchhhhhhHHH-HHHHhCCCCc-h--HHHHHHHHHhhhHHhhHhhhhcccCCceeeh--hhhHHHHHHHHHHH
Q 018767 156 MVLQQFVGINGIGFYTSE-TFVQAGLSSG-K--LGTILYACVQVPITVVGAFLMDKSGRRPLIM--ISAAGTFLGCFLAG 229 (350)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~--~~~~~~~~~~~~~~ 229 (350)
..+++.. ....-..++. ..+++. ++. + .......+...+++.+.|.+.||++.-+.+. .+.+....++...
T Consensus 279 i~~~n~~-lafLePtlslwm~e~m~-~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i- 355 (464)
T KOG3764|consen 279 ITFSNSS-LAFLEPTLSLWMLETMF-TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI- 355 (464)
T ss_pred hhhccch-HHHhCcccHHHHHHhcc-CCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh-
Confidence 1222111 2222233333 334444 333 2 6677788889999999999999999443333 2333222222222
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcc---hhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPIN---IKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
...++... .+.......+.+........|.. .+..|.-..+ .-|...++......+|.++||.++|.+.
T Consensus 356 --P~~~~~~~-----L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv 427 (464)
T KOG3764|consen 356 --PFATSIAQ-----LWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV 427 (464)
T ss_pred --HhhhhHHH-----HhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe
Confidence 11111100 12222233333333333444554 5555654444 5688999999999999999999999998
Q ss_pred hh-hccchhhHHHHhhHHHhh
Q 018767 307 SW-SSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 307 ~~-~~~~~~~~~~~~~~~~~~ 326 (350)
+. +..+...+.+....+-+-
T Consensus 428 ~~iGF~wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 428 EAIGFEWLMTIIGILNLIYAP 448 (464)
T ss_pred eehhHHHHHHHHHHHHHHHHH
Confidence 86 555555555555554443
No 89
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.74 E-value=8.2e-17 Score=142.68 Aligned_cols=292 Identities=15% Similarity=0.121 Sum_probs=172.7
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc--------------------
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-------------------- 62 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-------------------- 62 (350)
+..++++|+++|+|.+..++.+.+++.|++|+++|++++++...+..+|.++|+++++.+
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~ 251 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPT 251 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCC
Confidence 456789999999999999999999999999999999999999999999999998887543
Q ss_pred ------hhhHHHhhchHHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcch
Q 018767 63 ------PWRILALTGLVPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKAS 136 (350)
Q Consensus 63 ------~Wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (350)
+||..|++.+++.++..+.++++|++.+....+.+.++.++ +......++...+ . ....++....
T Consensus 252 dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~--~~~~~~~~~~~~~---~----~~~~~~~~~~ 322 (633)
T TIGR00805 252 DPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHET--EKLEKSEDKSRKK---N----SDITKDFPKI 322 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhh--hcccccccccchh---h----hhhHHHHHHH
Confidence 17777888777777755555566654210000000000000 0000000000000 0 0000011234
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHH-HhhhHHhhHhhhhcccCC--
Q 018767 137 IRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYAC-VQVPITVVGAFLMDKSGR-- 210 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~-~~~~~~~~~g~l~d~~gr-- 210 (350)
++++++++......+...+ .......+..+.|.+++ .++.+... .......+ +.+++.+++|+++||+++
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~----~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~ 398 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVI----DSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNV 398 (633)
T ss_pred HHHHHcCcHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccH
Confidence 5667776654443333322 22334556667777765 46777655 33333343 567899999999999984
Q ss_pred ceeehhhhHHHHHHHHHHHHHHHh-----------------------c----------cc--------------------
Q 018767 211 RPLIMISAAGTFLGCFLAGTSFFL-----------------------K----------GQ-------------------- 237 (350)
Q Consensus 211 r~~~~~~~~~~~~~~~~~~~~~~~-----------------------~----------~~-------------------- 237 (350)
|+.+..+.....++.+........ . ..
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AG 478 (633)
T TIGR00805 399 KKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAG 478 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccC
Confidence 455665555555554442210000 0 00
Q ss_pred --------cc--cc-------------------Cc--h-hHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhH
Q 018767 238 --------NM--FL-------------------DW--V-PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGS 285 (350)
Q Consensus 238 --------~~--~~-------------------~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 285 (350)
+. +. .. . ....++...+..........|.. ..+...+|+++|+.+.|
T Consensus 479 C~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~-~i~lR~V~~~~rs~alg 557 (633)
T TIGR00805 479 CSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLY-MVLLRVVNPEEKSLAIG 557 (633)
T ss_pred CCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchh-eEEeeccCcccchHHhh
Confidence 00 00 00 0 12222333333333444455655 67788999999999999
Q ss_pred HHHHHHH-HHHHHHHHHhHHHHhh
Q 018767 286 LVVLVNW-SGAWAVSYTFNFLMSW 308 (350)
Q Consensus 286 ~~~~~~~-~g~~~~~~~~~~l~~~ 308 (350)
+...+.+ +|.+-+|.+.|.+.|.
T Consensus 558 ~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 558 LQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHHHHHHHhcCCChhHHHhhhhhc
Confidence 9988855 5778899999999874
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=3.1e-18 Score=146.54 Aligned_cols=308 Identities=17% Similarity=0.153 Sum_probs=184.4
Q ss_pred hhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHHHHHH
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVLLLVG 81 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~~~~ 81 (350)
++..=++.|+|.|..+..+...+..++ +++|+.+.|+...+.++|..+-|.+...+ |||+.+++.+.+.+-..+.
T Consensus 138 ~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~ 216 (509)
T KOG2504|consen 138 YLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVA 216 (509)
T ss_pred HHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 344668899999999999999999877 57899999999999999999999888877 9999988766655544333
Q ss_pred -HhccCCChHHHHHhCChHHHHHHHH------------HHhcCCcchHH----HHHHHHHHHHhcc-CCCcchh----hh
Q 018767 82 -LCFVPESPRWLAKVGLDKEFQVALR------------KLRGKDADITR----EAAEIQVYILTLR-SLPKASI----RD 139 (350)
Q Consensus 82 -~~~~~esp~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~----~~ 139 (350)
...-|.+++-... .++..+... ....++....+ ...+.++..++.+ ...+... .+
T Consensus 217 ~~~~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 293 (509)
T KOG2504|consen 217 GALLRPLSPPKKPN---EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLS 293 (509)
T ss_pred HHHcCCCCcCCCch---hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHH
Confidence 3333433221000 000000000 00000000000 0000000000000 0111111 35
Q ss_pred hhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCcee--eh
Q 018767 140 LFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPL--IM 215 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~--~~ 215 (350)
+++++ .++.+.+.......++.....++|.+.++.+.++.+ ....+.++..+++.++.|++.|+...++. ..
T Consensus 294 ll~~~----~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 294 LLKDP----KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred HHcCc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 56653 333344444444455677778888888888888777 77888999999999999999999884433 33
Q ss_pred hhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHH
Q 018767 216 ISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGA 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 295 (350)
++.+...++.... .... ....+....++.+.............+.|+.+.++-..+.|+...+..++.
T Consensus 370 ~~ll~~gl~~~~~---p~~~---------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~ 437 (509)
T KOG2504|consen 370 LTLLIAGLARLFL---PFAT---------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGA 437 (509)
T ss_pred HHHHHHHHHHHHH---HHhc---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHH
Confidence 3343444333222 2111 233333344444444444445554688999999999999999999999999
Q ss_pred HHHHHHhHHHHhh-hccchhhHHHHhhHHHhhheeeecc
Q 018767 296 WAVSYTFNFLMSW-SSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 296 ~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
.++|.+.|.+.|. +.+...+.++.+..+.+...++..+
T Consensus 438 l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 438 LVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999988887 3244333333333333333333333
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.72 E-value=2.1e-16 Score=136.35 Aligned_cols=290 Identities=11% Similarity=0.012 Sum_probs=156.0
Q ss_pred hhhhHhhhhhccccccchhhhhhhcccCcc--chhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHHHH
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIAPRN--LRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVLLL 79 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~~ 79 (350)
++++|+++|+|.|...+...+++.|.+|++ +|+++.+++..+.++|..++|.+++++ |||+.|++.++..++.+
T Consensus 108 l~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 108 IFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999877 457789999999999998888877766 99999998655433344
Q ss_pred HHHhccCCChHHHH--HhCChHHHHHHHH----------HH--hcCCcchHHHHHHH------HHHHHhccCCCcchhhh
Q 018767 80 VGLCFVPESPRWLA--KVGLDKEFQVALR----------KL--RGKDADITREAAEI------QVYILTLRSLPKASIRD 139 (350)
Q Consensus 80 ~~~~~~~esp~~~~--~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 139 (350)
+.+...++..+... .+++..+...... .. ..++.......... .....++.+. .+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~-----~~ 262 (489)
T PRK10207 188 LVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKL-----DK 262 (489)
T ss_pred HHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CH
Confidence 44433332211000 0010011111000 00 00000000000000 0000001111 13
Q ss_pred hhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCC-----c-hHHHHHHHHHhhhHHhhHhhhhcccCCce
Q 018767 140 LFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSS-----G-KLGTILYACVQVPITVVGAFLMDKSGRRP 212 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~ 212 (350)
.+|++......+ ++........+.......+.+.++ .+.+. . ........+..++.+++.+++.||.++|+
T Consensus 263 ~~r~r~~~~~~l--~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~ 340 (489)
T PRK10207 263 TGRNKMFVAFVL--MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKG 340 (489)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCC
Confidence 334322111111 111111222222232333433332 22211 1 13444455667678888899999999887
Q ss_pred e-------ehhhhHHHHHHHHHHHHHHH-hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHh
Q 018767 213 L-------IMISAAGTFLGCFLAGTSFF-LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAG 284 (350)
Q Consensus 213 ~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 284 (350)
. +.+|.++..++.+.++.... ....+. ....+..+....+.+.+..... +....++.+..|++.++.++
T Consensus 341 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~--~~s~~~~i~~~~l~g~Ge~~~~-~~g~~~~~~~aP~~~~g~~~ 417 (489)
T PRK10207 341 KDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQG--LTSPWFIVLVYLFQSLGELFIS-ALGLAMIAALVPQHLMGFIL 417 (489)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--ccCHHHHHHHHHHHHHHHHHHh-HHHHHHHHHhChHHHHHHHH
Confidence 4 66666666666544322111 111100 0112334444444444444444 44448888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHH
Q 018767 285 SLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 285 ~~~~~~~~~g~~~~~~~~~~l 305 (350)
|+.+....+|+.++..+....
T Consensus 418 g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 418 GMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998887655
No 92
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.70 E-value=2.4e-15 Score=128.21 Aligned_cols=294 Identities=14% Similarity=0.123 Sum_probs=175.3
Q ss_pred hhHhhhhhccccccchhhhhhhcccCccch--------------------------hhHHhHHHHHHHHHHHHHHHhcCC
Q 018767 8 LEDFSTGYGIGVFSYVVPIFIAEIAPRNLR--------------------------GLLTTLNQLLIVTGSSVAYIIGSI 61 (350)
Q Consensus 8 ~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~~~~~~~~ 61 (350)
+.-++.-++.+...+...+++.|..+++++ ++..+.-.....+|.++...+.-.
T Consensus 131 ~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~ 210 (477)
T PF11700_consen 131 VLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL 210 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 344444456666777888999999998888 888888877777887776655433
Q ss_pred c------------hhhHHHhhchHHHHH-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Q 018767 62 I------------PWRILALTGLVPCVL-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILT 128 (350)
Q Consensus 62 ~------------~Wr~~f~~~~~~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (350)
+ +-|..+.+.++.-++ .+...+++||.|+....++..+..+...++
T Consensus 211 ~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~--------------------- 269 (477)
T PF11700_consen 211 LVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKR--------------------- 269 (477)
T ss_pred HHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHH---------------------
Confidence 2 247778776665444 667778888876420000000000000000
Q ss_pred ccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhh
Q 018767 129 LRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLM 205 (350)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~ 205 (350)
-...+++..|.++..+ ..+..+...-+...+......+ .++.+++..+ ...+...+.+++|+++.|++.
T Consensus 270 ----l~~t~k~~~~~~~~~~----fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~ 341 (477)
T PF11700_consen 270 ----LWRTFKEIRKLRQLFL----FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQ 341 (477)
T ss_pred ----HHHHHHHHHhChHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112333333222222 2333333333344444444444 3478888877 667778899999999999999
Q ss_pred cccCCc--eeehhhhHHHHHHHHHHHH--HHHh-cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchh
Q 018767 206 DKSGRR--PLIMISAAGTFLGCFLAGT--SFFL-KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIK 280 (350)
Q Consensus 206 d~~grr--~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 280 (350)
||+|.| +++..+.....+..+.-.+ .... ..++ .+...+...+.+ .+..+..+..-++.+|+.|+++.
T Consensus 342 ~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~------~~~f~~~a~~~G-~~~G~~qs~sRs~~~~LiP~g~e 414 (477)
T PF11700_consen 342 DRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKS------PWEFWVLAVLIG-LFMGGIQSASRSLFSRLIPPGRE 414 (477)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCccc------HHHHHHHHHHHH-HHhhhHHHHHHHHHHHhCCCchh
Confidence 999998 7766655554332222211 0000 0011 233333333333 33344455666999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhHHHHhhhc--cchhhHHHHhhHHHhhheeeecccCCCC
Q 018767 281 GVAGSLVVLVNWSGAWAVSYTFNFLMSWSS--SGTFFIYSAFSVITVLFVAKFVPETKGK 338 (350)
Q Consensus 281 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (350)
+..+|++.......+.+||.+.+.+.+..+ ...+....++.+ .++..+..++.+|++
T Consensus 415 ~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~-~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 415 AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFL-IGLILLFFVDVEKGR 473 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH-HHHHHHhhccchhhh
Confidence 999999999999999999999999998743 233333333333 334344555555544
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.70 E-value=2.2e-15 Score=118.73 Aligned_cols=254 Identities=20% Similarity=0.175 Sum_probs=172.6
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhchHHHHH
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTGLVPCVL 77 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~~~~~~~ 77 (350)
...++.+-.+.|.|.+...+..+..+.+.+| |+-+..++++....++|..+++.+.-.+ +||....+-+.++++
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all 177 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL 177 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence 3457788899999999999999999999997 6789999999999888777776555443 799999888888888
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
.++.++.-. .|. +. ...+.+..+-..++|++.-+...+ ++
T Consensus 178 Al~~WlPq~--~r~-----~~-----------------------------~~~~~~~~~~~~vw~~~~aW~vtL----fm 217 (395)
T COG2807 178 ALLIWLPQA--LRE-----QA-----------------------------ASIATKLVSVRKVWRSPLAWQVTL----FM 217 (395)
T ss_pred HHHHHhhhc--ccc-----cc-----------------------------cccccccccccccccCchhHHHHH----HH
Confidence 776654321 110 00 001112223345677665455444 33
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC-CceeehhhhHHHHHHHHHHHHHHHh
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSG-RRPLIMISAAGTFLGCFLAGTSFFL 234 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g-rr~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
..+...++....|+|.++.+.|.+..+ .......+.+++.++....+.+|.. +|+.......++.++.+.+.+..
T Consensus 218 GlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P-- 295 (395)
T COG2807 218 GLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP-- 295 (395)
T ss_pred HhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh--
Confidence 444444778888999999999999877 7778888999999999999999754 55555556666666666654321
Q ss_pred cccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcc-cCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 018767 235 KGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSE-IFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 310 (350)
.+. .+.. ..+++.+.+..+ ++......+ .-.++..+.-.|+.+.++++-+.++|.+.|++.|..+
T Consensus 296 -~~~------~~lw---~~llG~G~G~~F-~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 296 -GQL------PILW---ALLLGLGQGGAF-PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred -hhH------HHHH---HHHHhCccchHH-HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 111 1222 233333333322 333344444 3344555778899999999999999999999999843
No 94
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.67 E-value=6.8e-15 Score=127.02 Aligned_cols=317 Identities=13% Similarity=-0.029 Sum_probs=165.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccc---hhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNL---RGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVP 74 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~ 74 (350)
+++.+++.|++.|+|.|...+...++++|++|+++ |+++.++...+.++|.++++.+++.+ |||+.|.+.++.
T Consensus 101 ~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~ 180 (475)
T TIGR00924 101 YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVG 180 (475)
T ss_pred cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 45667889999999999999999999999998764 88899999999999999999888766 899999987765
Q ss_pred HHHHHHHHhccC----CChHHHHHhCChHHHHHHHHH--------------HhcCCcchHHHHHH-------HHHHHHhc
Q 018767 75 CVLLLVGLCFVP----ESPRWLAKVGLDKEFQVALRK--------------LRGKDADITREAAE-------IQVYILTL 129 (350)
Q Consensus 75 ~~~~~~~~~~~~----esp~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-------~~~~~~~~ 129 (350)
.++..+.+...+ +.|+.. ++.+.++.+..... ....+......... ........
T Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (475)
T TIGR00924 181 MVIGLLTFFAGRHMLRDIGSVP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAF 259 (475)
T ss_pred HHHHHHHHHHcccccccCCCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555444433332 222100 00000000000000 00000000000000 00000000
Q ss_pred cCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCC------chHHHHHHHHHhhhHHhhHh
Q 018767 130 RSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSS------GKLGTILYACVQVPITVVGA 202 (350)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~g 202 (350)
++ ...+.-+++. .. .+.+.+........+.-.....+.+.++ .+.+. ......+..+..++..++..
T Consensus 260 ~~----~~~~~~~~~~-~~-~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~ 333 (475)
T TIGR00924 260 KP----RLDAVARNKM-YA-YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLA 333 (475)
T ss_pred hc----cCCHHHHhHH-HH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHH
Confidence 00 0011111111 11 2222222222222222333333333322 22221 11555566666666665544
Q ss_pred ----hhhcc-cCCceee--hhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccC
Q 018767 203 ----FLMDK-SGRRPLI--MISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIF 275 (350)
Q Consensus 203 ----~l~d~-~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 275 (350)
++.|| .+.+... .+|.++..++...++......+.. .....++.+....+...+-.. ..|...+++.+..
T Consensus 334 ~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~--~~~s~~~~i~~~~~~~~ge~~-~~p~~~~~~~~~a 410 (475)
T TIGR00924 334 MIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG--GLTSPWFMVLIYLFQTLGELM-ISPLGLSWWTKIA 410 (475)
T ss_pred HHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC--CccCHHHHHHHHHHHHHHHHH-HhHHHHHHHHHhC
Confidence 44444 2223333 566777766666654432211110 011134444444444444444 4455559999999
Q ss_pred CcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh-ccchhhHHHHhhHHHhhhe
Q 018767 276 PINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS-SSGTFFIYSAFSVITVLFV 328 (350)
Q Consensus 276 p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 328 (350)
|++.||+..|+......+|..+++.+.....+.. ....+...+.+..+.+++.
T Consensus 411 P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 411 PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988887765543 3334444444444444444
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.67 E-value=1.3e-15 Score=131.04 Aligned_cols=254 Identities=12% Similarity=0.031 Sum_probs=146.0
Q ss_pred hhhhHhhhhhccccccchhhhhhhccc-CccchhhHHhHHHHHHHHHHHHHHHhc----CC-------chhhHHHhhchH
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIA-PRNLRGLLTTLNQLLIVTGSSVAYIIG----SI-------IPWRILALTGLV 73 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~~----~~-------~~Wr~~f~~~~~ 73 (350)
+++.-++.+.+.........++..|+. ++++|.+..++...+..+|..+++.+. .. .+|+..+.+.++
T Consensus 112 ~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~i 191 (444)
T PRK09669 112 ACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGL 191 (444)
T ss_pred HHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 444555556566666666778899988 558899888888777777766665422 11 268888877776
Q ss_pred HHHHHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 74 PCVLLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 74 ~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
++++..+. .+..+|.++. ++ +++.+...++++.++++.++.....
T Consensus 192 i~~v~~~~~~~~~~e~~~~----~~------------------------------~~~~~~~~~~~~~~~n~~~~~l~~~ 237 (444)
T PRK09669 192 LGVVLFFCCFFMTKERYTP----EV------------------------------DNSSSVWKDLKLLLGNSQWRIMFIF 237 (444)
T ss_pred HHHHHHHHHhCCeEEecCC----CC------------------------------cCCCCHHHHHHHHhCCchHHHHHHH
Confidence 66554433 4445553210 00 0011112346667787766555443
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHhCCCCch---HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQAGLSSGK---LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
.++....... .....+++.+. ..+... .......+..+++.++++++.||+|+|+.+..+.....+....+.
T Consensus 238 ~~~~~~~~~~----~~~~~~y~~~~-~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 312 (444)
T PRK09669 238 NVVLLTAVVT----RGGATLYYVNY-VLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIF 312 (444)
T ss_pred HHHHHHHHHH----Hhhhhheeeee-ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 3333222211 11111222121 122222 334445567778888999999999999998877655544332221
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-------cchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-------INIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
....++ .+...+...+.+.+.+ ...+..+++++|..+ .+..|...+..+.+..+|..+++.+.
T Consensus 313 ---~~~~~~------~~~~~~~~~i~g~~~~-~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 313 ---FIPPSN------VWLIFALNILFNFIQN-LTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred ---HhCcch------HHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 2233333333444443 334555688888775 23347778999999999999999999
Q ss_pred HHHHhh
Q 018767 303 NFLMSW 308 (350)
Q Consensus 303 ~~l~~~ 308 (350)
|.+.+.
T Consensus 383 g~ll~~ 388 (444)
T PRK09669 383 GWILAW 388 (444)
T ss_pred HHHHHH
Confidence 998875
No 96
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.67 E-value=2.6e-16 Score=124.33 Aligned_cols=276 Identities=12% Similarity=0.072 Sum_probs=149.9
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCchh------hHHHhh----c
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSIIPW------RILALT----G 71 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~W------r~~f~~----~ 71 (350)
|+..+++.|++.|+..| ...+..++++|.+++|+|++.++.+...+++|.++||.+|+++.- +.+|.. .
T Consensus 120 ~F~afv~aR~l~Gi~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v 198 (451)
T KOG2615|consen 120 NFAAFVLARFLGGIFKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLV 198 (451)
T ss_pred HHHHHHHHHHhhhhccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHH
Confidence 56566777999999987 667888999999999999999999999999999999999998822 223332 2
Q ss_pred hHHHHH-HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhH--
Q 018767 72 LVPCVL-LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRS-- 148 (350)
Q Consensus 72 ~~~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 148 (350)
.++... .....+++||+-+. +++.++. .+..+..++.. +..+.+...-....+++....
T Consensus 199 ~i~a~~~v~~~~~~lpETL~~---rk~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~v~~lrn~p~~~~i 260 (451)
T KOG2615|consen 199 FILAAGDVTFFPWFLPETLPL---RKRNDEH-----------STLQEAADDRL----ALLKFARIFKVAALRNPPLLDFI 260 (451)
T ss_pred HHHHHHHHHHHHHhCCccccc---hhhcccc-----------cchhhhhhhhh----hhcchhhhhhhhhhcCccccchH
Confidence 222222 33456778998421 1111110 00000000000 000000000011122221111
Q ss_pred -HHHHHHHHHHHHhhcchhhhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC--CceeehhhhHHHH
Q 018767 149 -VIIGVSLMVLQQFVGINGIGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSG--RRPLIMISAAGTF 222 (350)
Q Consensus 149 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g--rr~~~~~~~~~~~ 222 (350)
..-.+.+..+.....+....++.+.+ .+.+|+++.+ ......++.+.+......+..||.+ .+-.+..+..++.
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 11111122222222223333333333 2456676655 4444455555544444455555544 2222222222222
Q ss_pred HHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 223 LGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
-..+.+ ..... +........+..+........+. .++....|+++||+.+|+..+.+.++-++||.+.
T Consensus 341 P~~lll---s~~~~--------~~~l~~~s~l~sf~~A~~vt~Lt-~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 341 PAFLLL---SLART--------PVVLYLGSTLKSFSTASVVTCLT-SLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HHHHHH---hcccc--------chhhhHHHHHHHHHHHHhhHHHH-HHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 222221 11111 23334444444444455555555 8888999999999999999999999999999999
Q ss_pred HHHHhh
Q 018767 303 NFLMSW 308 (350)
Q Consensus 303 ~~l~~~ 308 (350)
|....+
T Consensus 409 g~i~~W 414 (451)
T KOG2615|consen 409 GVIFSW 414 (451)
T ss_pred heeEEE
Confidence 988765
No 97
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.6e-15 Score=121.26 Aligned_cols=256 Identities=16% Similarity=0.156 Sum_probs=177.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-------------------
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------------------- 62 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------------------- 62 (350)
++..++++-|+.|.|.+.....+..++....++++..+.+.+.+..+++|.+++|++++.+
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~ 182 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKG 182 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999988754
Q ss_pred ----hhhHHHhhchHHHHHHHHHHhc--cCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcch
Q 018767 63 ----PWRILALTGLVPCVLLLVGLCF--VPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKAS 136 (350)
Q Consensus 63 ----~Wr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (350)
.||++|...+...++..+.... .||.+.- ..++.+.++..
T Consensus 183 ~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~----------------------------------~~~~~~~~~~~ 228 (422)
T COG0738 183 ADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA----------------------------------APSLGASGSAG 228 (422)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc----------------------------------cccccccccch
Confidence 2777777766555554443333 3443210 00001111115
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCcee
Q 018767 137 IRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPL 213 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~ 213 (350)
..+.+++++.+.-.+..+++..... ....+++.+..+ .|.+..+ ...+....+.++|.+++.++..|+...+.
T Consensus 229 ~~~l~~~~~~~~gvl~~FlYVG~Ev----a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~ 304 (422)
T COG0738 229 LSSLFQNKHLRLGVLAIFLYVGAEV----AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKY 304 (422)
T ss_pred HHHHHhChHHHHHHHHHHHHHhHHH----HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 6788888887777777777666554 334455555555 5656555 67778888999999999999999999888
Q ss_pred ehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHH
Q 018767 214 IMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWS 293 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 293 (350)
+.+...+..+.++...... ....+......+.+.+..+ |..++...+..|.+ ....|..-....+
T Consensus 305 Laf~a~~~ill~~~~~l~~------------g~v~~~~l~~ig~F~simf-PTIfslal~~l~~~--ts~~s~~l~maiv 369 (422)
T COG0738 305 LAFYALIAILLLLAVALIG------------GVVALYALFLIGLFNSIMF-PTIFSLALKNLGEH--TSVGSGLLVMAIV 369 (422)
T ss_pred HHHHHHHHHHHHHHHHHhc------------ChHHHHHHHHHHHHhHHHH-HHHHHHHHhccCcc--ccccceeeeehee
Confidence 8776665555555443321 1333444444554555544 54458899988833 3344444555778
Q ss_pred HHHHHHHHhHHHHhhhc
Q 018767 294 GAWAVSYTFNFLMSWSS 310 (350)
Q Consensus 294 g~~~~~~~~~~l~~~~~ 310 (350)
|+++.|++.|++.|..+
T Consensus 370 GGAiiP~l~G~i~d~~g 386 (422)
T COG0738 370 GGAIIPPLQGVIADMFG 386 (422)
T ss_pred cchHHHHHHHHHHHhhh
Confidence 99999999999998844
No 98
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.65 E-value=3e-14 Score=122.11 Aligned_cols=257 Identities=16% Similarity=0.174 Sum_probs=171.8
Q ss_pred hhhhHhhhhhccccccchhhhhhhcccC-ccchhhHHhHHHHHHHHHHHHHHHhcCCc-----------hhhHHHhhchH
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIAP-RNLRGLLTTLNQLLIVTGSSVAYIIGSII-----------PWRILALTGLV 73 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----------~Wr~~f~~~~~ 73 (350)
+.+.-++..++.........++..|..+ +++|.+..+.-..+..+|.++...+...+ +|++..++.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 4566666788888888888999999997 57899999999988888886555444332 59998888777
Q ss_pred HHHHHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 74 PCVLLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 74 ~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
+.++.. +..+..+|.++ +. +.++++.+-++.++++++++.++.....
T Consensus 186 v~~v~~~i~~~~~ke~~~------~~--------------------------~~~~~~~~~~~~~~~~~~nr~~~~l~~~ 233 (428)
T PF13347_consen 186 VGLVFFLITFFFVKERSV------EV--------------------------TEQEKKISLRDSLRSLFRNRPFRILLLA 233 (428)
T ss_pred HHHHHhhhhhheeeeccc------cc--------------------------cccccccccccchhhhcccchHHHHHHH
Confidence 777754 44556777211 00 0001122234456778887776665555
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHH-hCCCCch-HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQ-AGLSSGK-LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
..+...... ......+++.+. .+.+... .......+..+++.++.++++||+|+|+.+..+..+.+++.+.+.+
T Consensus 234 ~~~~~~~~~----~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 234 FFLQWLAFA----LMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHhhhh----hhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 444444332 223333444333 2333222 5566778888999999999999999999999999998888877654
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCc-------chhhhHhHHHHHHHHHHHHHHHHHhH
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI-------NIKGVAGSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~~~~~~~~~~g~~~~~~~~~ 303 (350)
... .+ .+...+...+.+.+.+... ...+++.+|..+. +..|...|+.+....++..+++.+.+
T Consensus 310 ~~~-~~--------~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 310 LGP-GS--------PWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHh-hh--------HHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 432 11 3444444444444444443 5556888888763 33488999999999999999999999
Q ss_pred HHHhh
Q 018767 304 FLMSW 308 (350)
Q Consensus 304 ~l~~~ 308 (350)
.+.+.
T Consensus 380 ~~l~~ 384 (428)
T PF13347_consen 380 LLLAL 384 (428)
T ss_pred HHHHH
Confidence 88764
No 99
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.64 E-value=5.2e-15 Score=128.21 Aligned_cols=263 Identities=11% Similarity=0.033 Sum_probs=145.5
Q ss_pred hhhhHhhhhhccccccchhhhhhhccc-CccchhhHHhHHHHHHHHHHHHHHHh--------cCC---chhhHHHhhchH
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIA-PRNLRGLLTTLNQLLIVTGSSVAYII--------GSI---IPWRILALTGLV 73 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~~--------~~~---~~Wr~~f~~~~~ 73 (350)
+++.-++.+++.....+...++..|.. ++++|.+..++...+.++|..+.+.+ +.. .+|+....+.++
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 344455566677777777888999998 58999999988666666654443322 111 157777766666
Q ss_pred HHHHHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHH
Q 018767 74 PCVLLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIG 152 (350)
Q Consensus 74 ~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (350)
..++.. +..+..+|.++. ++.++ .++++.+.+..++.+++|+.++..+..
T Consensus 189 ~~~~~~~~~~~~~~e~~~~----~~~~~-------------------------~~~~~~~~~~~~~~~~~n~~~~~ll~~ 239 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSS----DNQVS-------------------------AEGSHLTLKDIVALIYKNDQLSCLLGM 239 (473)
T ss_pred HHHHHHHHHHcCceecCCc----ccccc-------------------------ccccCCCHHHHHHHHhcCHHHHHHHHH
Confidence 655543 334446664310 00000 000001112233445555444433333
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
.++.... ......+.+++.+....+... .......+..+++.++.+++.||+|+|+.+..+..+..++.+.+..
T Consensus 240 ~~~~~~~----~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~ 315 (473)
T PRK10429 240 ALAYNIA----SNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLL 315 (473)
T ss_pred HHHHHHH----HHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 2222221 222222333333322222222 3444556778889999999999999999988777766655544422
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-------cchhhhHhHHHHHHHHHHHHHHHHHhH
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-------INIKGVAGSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~ 303 (350)
.......+ .+..++...+.+.+.+... +..+++..|..+ .+..|...|....+..++..+++.+.|
T Consensus 316 ~~~~~~~~------~~~~~i~~~l~g~~~~~~~-~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 316 MGLAAPHN------ALLIVIAGILLNIGTALFW-VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred HhccCchh------HHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111111 2233333333333333333 444578888854 233477889999999999999999999
Q ss_pred HHHhh
Q 018767 304 FLMSW 308 (350)
Q Consensus 304 ~l~~~ 308 (350)
.+.+.
T Consensus 389 ~~l~~ 393 (473)
T PRK10429 389 VVLGL 393 (473)
T ss_pred HHHHH
Confidence 98764
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=9.2e-15 Score=126.92 Aligned_cols=287 Identities=11% Similarity=0.037 Sum_probs=146.2
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccCccc--hhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNL--RGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
+.+.+.|+++|++.|...+...+++.|++|+++ |..+.+++..+.++|..++|.+++++ |||+.|++.++..++
T Consensus 113 ~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 113 GIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 456788999999999999999999999998654 45678888899999999999888766 899999987764444
Q ss_pred HHHH----HhccCCChHHHHHhCChHHHHHHH-----------HHHhcCCcchHHHHHHH------HHHHHhccCCCcch
Q 018767 78 LLVG----LCFVPESPRWLAKVGLDKEFQVAL-----------RKLRGKDADITREAAEI------QVYILTLRSLPKAS 136 (350)
Q Consensus 78 ~~~~----~~~~~esp~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 136 (350)
.++. ...++|.++. .++++.+...... ......+.+........ ........+
T Consensus 193 ~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 266 (500)
T PRK09584 193 TVVNFAFCQRWVKQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFA----- 266 (500)
T ss_pred HHHHHHHhHHHhccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 3322 2223332110 0000011100000 00000000000000000 000000000
Q ss_pred hhhhhcccchhHHHHHHH--HHHHHHhhcchhhhhhHHHHHHH-h-----CCCCch-HHHHHHHHHhhhHHhhH----hh
Q 018767 137 IRDLFKSKYIRSVIIGVS--LMVLQQFVGINGIGFYTSETFVQ-A-----GLSSGK-LGTILYACVQVPITVVG----AF 203 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-~~~~~~~~~~~~~~~~~----g~ 203 (350)
.++..+++....+. +.....+..+.-...+......+ . |..... ....+..+..++..++. ++
T Consensus 267 ----~~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~ 342 (500)
T PRK09584 267 ----MKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNK 342 (500)
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 00011122222111 11111111111112222211111 1 111111 44455555555555555 55
Q ss_pred hhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhH
Q 018767 204 LMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVA 283 (350)
Q Consensus 204 l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 283 (350)
+.||.+..+.+.++.++.+++.+.+.......+.+.. ...++.+....+ .........|....++.+..|++.||+.
T Consensus 343 l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~--vs~~~~~~~~~l-~~~ge~~~~p~g~s~~~~~aP~~~rg~~ 419 (500)
T PRK09584 343 MGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGI--VSVNWLIASYGL-QSIGELMISGLGLAMVAQLVPQRLMGFI 419 (500)
T ss_pred hCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc--cCHHHHHHHHHH-HHHHHHHHhHHHHHHHHHhCcHHHHHHH
Confidence 5556555566777788888887776554432221111 012233333333 3344444556666999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhH
Q 018767 284 GSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 284 ~~~~~~~~~~g~~~~~~~~~ 303 (350)
+|.......+|+.++..+.+
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99887777777777666654
No 101
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.63 E-value=1.6e-15 Score=130.45 Aligned_cols=280 Identities=12% Similarity=0.025 Sum_probs=163.3
Q ss_pred hhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHH---HHHHHHHHHHhcCCc----hhhHHHhhchHHHHHHH
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLL---IVTGSSVAYIIGSII----PWRILALTGLVPCVLLL 79 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~---~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~~ 79 (350)
.+.+++.+++.+...+...++..|..+ +++....+..... .++|.++++.+++.+ +||..|++.+.+.++..
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~ 202 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL 202 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 348899999999999999999999998 5554433333322 235666666666544 89999998877777766
Q ss_pred HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHH
Q 018767 80 VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQ 159 (350)
Q Consensus 80 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
+...+++|++.....+.+.++.. .. ........+ . .++.....++.++++..++.+...++.+..
T Consensus 203 ~~~~~~~E~~~~~~~~~~~~~~~----~~------~~~~~~~~~-~----~~~~~~~l~~~l~~~~i~~~l~fifl~~~~ 267 (468)
T TIGR00788 203 FVSNLSKERRAFVRPRIGTYLEM----NM------ALLTLGVLA-N----VKVQILGLRGAIQLLEIAKPLIFIFLSYAN 267 (468)
T ss_pred HHHHhcccccccccccccccchh----hh------hhhhhhHHH-H----HHHHHHHHHHHHhcHHHHHHHHHHHHHHhh
Confidence 66677888531100000000000 00 000000000 0 000011233344544433333222221111
Q ss_pred HhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH-Hhcc
Q 018767 160 QFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF-FLKG 236 (350)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-~~~~ 236 (350)
... .....+. ...+..|.++.. ......+++.+++....+++.+|++.|+.+.++.++..++........ ..+.
T Consensus 268 -~~~-~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~ 344 (468)
T TIGR00788 268 -LPG-ASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNL 344 (468)
T ss_pred -cCC-CCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeecccc
Confidence 111 1111111 111346777665 667778899999999999999999999998888877777654432111 0000
Q ss_pred cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 237 QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.....+ .+.......+.....+....+.. .++.+..|++.+++..++.+++.++|..+++.+++.+.++
T Consensus 345 ~~gi~~--~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 345 AFGISD--EVFVLGDSIIAEVLAQLKFMPFL-VLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred ccCCCC--eeeeeehhHHHHHHHHHHHccHH-HHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 12223333445555666666775 9999999999999999999999999999999999988876
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.63 E-value=4.2e-15 Score=112.95 Aligned_cols=296 Identities=14% Similarity=0.046 Sum_probs=159.1
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-hhhHHHhhchHHHHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-PWRILALTGLVPCVLLLV 80 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-~Wr~~f~~~~~~~~~~~~ 80 (350)
.+|.++++||+.|+|.-..-+....|+.-|+..|+.+.++|+.....-+|..+-..+..++ +.-.-++-+..-..+.+.
T Consensus 135 aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~ 214 (459)
T KOG4686|consen 135 AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLW 214 (459)
T ss_pred HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHH
Confidence 5789999999999998888888999999999999999999999888888766544333333 111111111111111111
Q ss_pred HHh---ccCCChHHHHHhC-ChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhh--hcccchhHHHHHHH
Q 018767 81 GLC---FVPESPRWLAKVG-LDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDL--FKSKYIRSVIIGVS 154 (350)
Q Consensus 81 ~~~---~~~esp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 154 (350)
+.+ ....|-.-....+ .++++++.+++ ++....+.....+. ++ +.++...+.+.
T Consensus 215 l~~~~~tc~~slical~lg~~D~rAerilh~-------------------e~g~~Ge~pkLtdv~~f~-ppfw~~~iicv 274 (459)
T KOG4686|consen 215 LCFEVKTCKQSLICALSLGLSDDRAERILHL-------------------EEGFLGEEPKLTDVNTFY-PPFWVLVIICV 274 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHhh-------------------hcCcccCCcccccccccC-ccHHHHHHHHH
Confidence 100 0000000000000 00111111111 00000011111121 22 22233333333
Q ss_pred HHHHHHhhcchhhhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+.... ...+....|.+ .+.+|+++.. ...+.......+.+++.|.++||+|++-..+.+..+..+..-.....
T Consensus 275 ~yyva----~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F 350 (459)
T KOG4686|consen 275 LYYVA----WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF 350 (459)
T ss_pred HHHHH----HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh
Confidence 33322 22233333444 4567888655 44555556666788999999999999988777655544433332221
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc-
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS- 310 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~- 310 (350)
.... ++.. +.+.+..+... ....|..++.+.|.++-|++.|.++..+++|-.+.|++.|.+.+..+
T Consensus 351 t~ls---------Py~~---m~~lGLsysll-AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 351 TFLS---------PYTS---MTFLGLSYSLL-ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred hhcc---------HHHH---HHHHhhhHHHH-HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 1111 2222 22233233222 23346778888999999999999999999999999999999988633
Q ss_pred c---chhhHHHHhhHHHhhheeeeccc
Q 018767 311 S---GTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 311 ~---~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
+ ..+++......+..+...+.+.+
T Consensus 418 y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 418 YDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 2 23444444444444433344433
No 103
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.61 E-value=2e-15 Score=124.89 Aligned_cols=286 Identities=8% Similarity=0.045 Sum_probs=163.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHh---hchHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILAL---TGLVPC 75 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~---~~~~~~ 75 (350)
++..+.+.|++.|+++|+.. ....++..|+|+++|+++.++..++..+|.+++++++..+ |||+.+. +.....
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 56789999999999999999 9999999999999999999999999999999999888766 8987553 444445
Q ss_pred HHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHH-HHHHHHhccCCCcchhhhhhcccchhHHHHHHH
Q 018767 76 VLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAE-IQVYILTLRSLPKASIRDLFKSKYIRSVIIGVS 154 (350)
Q Consensus 76 ~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (350)
.+++++.+++|..++-+.-+++.+.......+.....++...+..+ .+......-..-...+++..+++. ++.-.
T Consensus 193 ~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~----vl~WS 268 (511)
T TIGR00806 193 TFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQ----LLLWS 268 (511)
T ss_pred HHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcc----hhhhh
Confidence 5567777888865553332221110000000000000000000000 000000000000112233334332 22233
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHhCCCCc-h--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETFVQAGLSSG-K--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+.+.....+++-+..|...+.++..-+.. . ..-++..+.+.+.++..|++-.++.+-..+.++.....-+.+++ +.
T Consensus 269 lWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~-~m 347 (511)
T TIGR00806 269 LWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVF-WM 347 (511)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhh-hh
Confidence 34444455567777788777776644322 2 55566667777788888988666533323333322222222221 11
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
...+ + .+.......++...+........ .-++.....+.-|...|+++++..+-..+-..+.
T Consensus 348 ~~t~--~------Iw~~Y~~yvlf~~~y~flitia~-~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 348 SQSH--D------IWVLYVTYVLFRGIYQFLVPIAT-FQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred hccc--c------hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 1111 1 56666777777777776665555 4444555555568899999888777666555443
No 104
>PTZ00207 hypothetical protein; Provisional
Probab=99.60 E-value=1.9e-13 Score=118.52 Aligned_cols=310 Identities=11% Similarity=0.031 Sum_probs=176.7
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHH-HHHhcCCc--hhhHHHhhchHHHHH-
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSV-AYIIGSII--PWRILALTGLVPCVL- 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~~~~--~Wr~~f~~~~~~~~~- 77 (350)
+++.+.+.|+++|+|.+...+.+...+.+|+| ++||++.|+...+.++|.++ +++....+ +|+..|++.++..++
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVV 197 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999996 78999999999999999976 44444444 898888776666555
Q ss_pred HHHHHhc--cCCChHHHHHhCChHHHHHHHHHHhcC------Cc------------------------------------
Q 018767 78 LLVGLCF--VPESPRWLAKVGLDKEFQVALRKLRGK------DA------------------------------------ 113 (350)
Q Consensus 78 ~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~~------~~------------------------------------ 113 (350)
.++...+ .|++|++..++++.++.++..++..+. .+
T Consensus 198 ~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~ 277 (591)
T PTZ00207 198 GILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKV 277 (591)
T ss_pred HHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 4444444 354455543443333333221111000 00
Q ss_pred ------------------------------chHHHHHHH-H--HH-HHhc--------c---CCCcchhhhhhcccchhH
Q 018767 114 ------------------------------DITREAAEI-Q--VY-ILTL--------R---SLPKASIRDLFKSKYIRS 148 (350)
Q Consensus 114 ------------------------------~~~~~~~~~-~--~~-~~~~--------~---~~~~~~~~~~~~~~~~~~ 148 (350)
+.+.+..+. + .+ .+.+ + .+...++.+.+++..+|.
T Consensus 278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wl 357 (591)
T PTZ00207 278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWC 357 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHH
Confidence 000000000 0 00 0000 0 001114444444434343
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHh-CC-CCc--h-HHHHHHHHHhhhHHhhHhhhhcccCCce----e----eh
Q 018767 149 VIIGVSLMVLQQFVGINGIGFYTSETFVQA-GL-SSG--K-LGTILYACVQVPITVVGAFLMDKSGRRP----L----IM 215 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~-~~~~~~~~~~~~~~~~~g~l~d~~grr~----~----~~ 215 (350)
.+ ...++....-......+.++.+.. |. .+. . ....+.++++.+|.+..|.+.....||+ . .+
T Consensus 358 l~----~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 358 LL----WSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIAL 433 (591)
T ss_pred HH----HHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHH
Confidence 33 334433333445555666777777 65 222 1 3678889999999999998873322222 1 11
Q ss_pred hhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHH
Q 018767 216 ISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGA 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 295 (350)
....++.++.+++... .+ .....+...+.+.+++..++... ..++|+|. ++-|+-.-+.....-+|+
T Consensus 434 ~~~~~~~~~~lll~~~--~p---------~~~L~~~~~lvg~~~G~~~~~~~-~i~selFg-k~~g~~yN~~~~a~pigs 500 (591)
T PTZ00207 434 FIPSVCIITMLTLFLT--LP---------KAALPLPYFIAAFANGFMAATIA-LVTRTIFA-KDPAKHYNFCFLGSVLSA 500 (591)
T ss_pred HHHHHHHHHHHHHHHH--CC---------ccHhHHHHHHHHHHhhHhHHHHH-HHHHHHhc-cchHHHhhHHhHHHHHHH
Confidence 1111133333333222 11 13345555666667777666666 89999999 777887777777777777
Q ss_pred HHH-HHHhHHHHhhh----c----------cchhhHHHHhhHHHhhhee
Q 018767 296 WAV-SYTFNFLMSWS----S----------SGTFFIYSAFSVITVLFVA 329 (350)
Q Consensus 296 ~~~-~~~~~~l~~~~----~----------~~~~~~~~~~~~~~~~~~~ 329 (350)
.+- -.+.|.++|.. + ..++.++++++.+..+...
T Consensus 501 ~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 501 IFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 765 56777777641 1 2346677776666655543
No 105
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.60 E-value=3e-14 Score=121.33 Aligned_cols=179 Identities=15% Similarity=0.066 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
++.....++.+..............|.+.++++.+..+ +......++..++.++.|++.||+|||+.+..+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 44555555555555555566677777777888888776 6777788888999999999999999999998888888887
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
....+... + .........+.+.+.+. ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.
T Consensus 87 ~~~~~~~~---~--------~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 87 STATMFAT---G--------PESLYLLRILVGIAEAG-FLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHhc---C--------HHHHHHHHHHHHHHHhh-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77764431 1 23333333344444433 334444788999999999999999999999999999999998
Q ss_pred HHhh-------hccchhhHHHHhhHHHhhheeeecccCCC
Q 018767 305 LMSW-------SSSGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 305 l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
+.+. ++...+.+.++..++..++.++++||+++
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 8642 44556666666666666666667777653
No 106
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.60 E-value=1.5e-13 Score=116.65 Aligned_cols=297 Identities=13% Similarity=0.069 Sum_probs=169.0
Q ss_pred hccccccchhhhhhhcccCccch--hhHHhHHHHHHHHHHHHHHHhcCCc-------------------hhhHHHhhchH
Q 018767 15 YGIGVFSYVVPIFIAEIAPRNLR--GLLTTLNQLLIVTGSSVAYIIGSII-------------------PWRILALTGLV 73 (350)
Q Consensus 15 ~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~~~~-------------------~Wr~~f~~~~~ 73 (350)
++.....+...+++.|..|+++| +.+.++.+...++|.++++.+++.. +-|..|++.++
T Consensus 126 ~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~ 205 (477)
T TIGR01301 126 VANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDII 205 (477)
T ss_pred HHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHH
Confidence 36677778889999999998865 6799999999999999998877643 45778888877
Q ss_pred HHHHH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhccc--chhHHH
Q 018767 74 PCVLL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSK--YIRSVI 150 (350)
Q Consensus 74 ~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 150 (350)
..++. ++..+.++|.|.... ++..++ +.++ .++.+....+++++++- ..+...
T Consensus 206 ~l~i~~l~t~~~v~E~~~~~~-~~~~~~------~~~~-----------------~~~~~~~~~~~~i~~~~~~mP~~m~ 261 (477)
T TIGR01301 206 LLAILTYIALSAVKENPLIGS-DDFINS------EAAP-----------------PSKHGEEAFFGELFGAFKYLPRPVW 261 (477)
T ss_pred HHHHHHHHHeeeeeccCCCcc-ccchhh------hccc-----------------ccccchhhhHHHHHHHHHHCCHHHH
Confidence 77775 445666888762110 000000 0000 00000111233333321 112222
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHH-HH-hCCCCc------------hHHHHHHHHHhhhHHhhHhhhhcccCC-ceeeh
Q 018767 151 IGVSLMVLQQFVGINGIGFYTSETF-VQ-AGLSSG------------KLGTILYACVQVPITVVGAFLMDKSGR-RPLIM 215 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~------------~~~~~~~~~~~~~~~~~~g~l~d~~gr-r~~~~ 215 (350)
..+...++..+. .+.+..|.+.+. ++ ++.++. .+......+...+.+++-.++.+|+|+ |+...
T Consensus 262 ~l~~vqffsW~a-~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~ 340 (477)
T TIGR01301 262 ILLLVTCLNWIA-WFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWG 340 (477)
T ss_pred HHHHHHHHHHHH-HHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 223333333332 333333433333 22 221111 034455556666777778889999985 66667
Q ss_pred hhhHHHHHHHHHHHHHHHhccc--c-----ccc---CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcc--hhhhH
Q 018767 216 ISAAGTFLGCFLAGTSFFLKGQ--N-----MFL---DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPIN--IKGVA 283 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~--~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~ 283 (350)
++.++.++++....+.....++ . ... ....+..+......+..+ .....++++++++..|++ ..|..
T Consensus 341 ~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~-A~~~siPfal~s~~~~~~~~~~G~~ 419 (477)
T TIGR01301 341 IVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPL-AITYSIPFALASIRSSNLGAGQGLS 419 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHH-HHHHHHhHHHHHHHccccCCCCcch
Confidence 7877777777776544321110 0 000 000123333333333333 334567789999998854 44999
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHhh-h-c-cchhhHHHHhhHHHhhheeeecccCCC
Q 018767 284 GSLVVLVNWSGAWAVSYTFNFLMSW-S-S-SGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 284 ~~~~~~~~~~g~~~~~~~~~~l~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
+|+.|.+..+.+.+.....|.+.+. + . ...+.+-++..+++++...+.+|+++.
T Consensus 420 mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 420 MGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999888885554 2 2 233444455555666666777776653
No 107
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=2.8e-14 Score=127.33 Aligned_cols=177 Identities=14% Similarity=0.074 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
+..+..+.+..+....-...+....|.+.++.+.+... +......++.+++.+++|+++||+|||+.++++.++..++
T Consensus 166 ~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~ 245 (742)
T TIGR01299 166 WALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFF 245 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 33333333333333222344566677777788887665 6677788999999999999999999999999988877777
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.++.++... .+.+++..++.+.+.+... +...+++.|.+|++.|+...++.+....+|.++++.+...
T Consensus 246 ~ll~afa~s-----------~~~llv~R~l~G~g~g~~~-p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~ 313 (742)
T TIGR01299 246 AFFSSFVQG-----------YGFFLFCRLLSGFGIGGAI-PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWA 313 (742)
T ss_pred HHHHHHHhh-----------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766643321 2333444444444444444 5556999999999999999999999999999999987766
Q ss_pred HHhhh-------------ccchhhHHHHhhHHHhhheeeecccC
Q 018767 305 LMSWS-------------SSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 305 l~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+.... +|..++.+.++..+.+++..+++||+
T Consensus 314 il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 314 IIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPES 357 (742)
T ss_pred HHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 55321 12334444455555555556677876
No 108
>PRK10054 putative transporter; Provisional
Probab=99.59 E-value=5.1e-14 Score=119.19 Aligned_cols=160 Identities=15% Similarity=0.054 Sum_probs=109.2
Q ss_pred cchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccc
Q 018767 163 GINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNM 239 (350)
Q Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
+......+.+.++ ++.|.+..+ .......+...+++++.|+++||+|||+.+..+.+...++.+.+.+...
T Consensus 22 g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~------ 95 (395)
T PRK10054 22 GRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNN------ 95 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhH------
Confidence 3444444555444 567888766 6666777888899999999999999999998888777776665543321
Q ss_pred ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHH
Q 018767 240 FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSA 319 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (350)
.+..+....+.+.... ...+...++..|..|+++|+++.++.+...++|..++|.+.+.+.+.++...+...++
T Consensus 96 -----~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~ 169 (395)
T PRK10054 96 -----VTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAI 169 (395)
T ss_pred -----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 2222222223333323 2334445888999999999999999999999999999999998876565666665555
Q ss_pred hhHHHhhheeeeccc
Q 018767 320 FSVITVLFVAKFVPE 334 (350)
Q Consensus 320 ~~~~~~~~~~~~~~~ 334 (350)
+..+..+...++.++
T Consensus 170 ~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 170 CSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHHHHhc
Confidence 555444434343443
No 109
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.59 E-value=3.4e-14 Score=121.91 Aligned_cols=173 Identities=14% Similarity=0.062 Sum_probs=120.2
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 151 IGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
....+..+..+..........|.+.++.+.+..+ .......++..++.++.|++.||+|||+.+.++.++..++.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH
Confidence 3333444443333345567788888888888766 66677888899999999999999999999998888888877766
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
..... .+.......+.+.+.+....+. ..++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 106 ~~~~~-----------~~~l~~~~~l~g~~~g~~~~~~-~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 106 GFSSS-----------LWAFALLWVLNAFFQGWGWPVC-AKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHhH-----------HHHHHHHHHHHHHHHHccchHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44321 2223333333344444444444 48899999999999999999999999999999999998876
Q ss_pred -hccchhhHHHHhhHHHhhheeeecccC
Q 018767 309 -SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 309 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
++...+.+.+++..+.++...++++|+
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 444455555555444444333444443
No 110
>PRK11462 putative transporter; Provisional
Probab=99.58 E-value=2.2e-13 Score=117.33 Aligned_cols=254 Identities=13% Similarity=0.068 Sum_probs=140.7
Q ss_pred hhhHhhhhhccccccchhhhhhhcccC-ccchhhHHhHHHHHHHHHHHHHHHhcCC-----------chhhHHHhhchHH
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAP-RNLRGLLTTLNQLLIVTGSSVAYIIGSI-----------IPWRILALTGLVP 74 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~-----------~~Wr~~f~~~~~~ 74 (350)
.+.-++..++.......-.++..|..+ ++||.+..++...+..+|..+++.+... .+|+....+.+++
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 334445566666677777788888886 7889999999999988887766544321 1577766666665
Q ss_pred HHHHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 75 CVLLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 75 ~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
.+++. +.....+|.++. +. ++...+..++..++|+.++......
T Consensus 193 ~~i~~~i~~~~~kE~~~~-----~~------------------------------~~~~~~~~l~~~~~Nk~~~~l~~~~ 237 (460)
T PRK11462 193 AFMMLAFCFFTTKERVEA-----PP------------------------------TTTSMREDLRDIWQNDQWRIVGLLT 237 (460)
T ss_pred HHHHHHHHHhcceeccCC-----Cc------------------------------cCCCHHHHHHHHhCChHHHHHHHHH
Confidence 55543 333345553210 00 0001122455667776655444333
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCch-HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGK-LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
.+.............+|..+.. +..... .......++.+++.+++++++||+++|+....+.....+...++ .
T Consensus 238 ~~~~~~~~~~~~~~~y~~~y~~---g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~---~ 311 (460)
T PRK11462 238 IFNILAVCVRGGAMMYYVTWIL---GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAM---F 311 (460)
T ss_pred HHHHHHHHHHHhHhhhhhhhhc---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---H
Confidence 3333322221222233333321 211111 44556677888899999999999999988765444333322222 1
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-------cchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-------INIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
..+..+ .........+.+.+. ....+..+++..|... .+..|...+.......+|..+++.+.|.+
T Consensus 312 ~~~~~~------~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 312 FVPMQA------SITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HhchhH------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 112222222223222 3333444566666654 22235556777788999999999999988
Q ss_pred Hhh
Q 018767 306 MSW 308 (350)
Q Consensus 306 ~~~ 308 (350)
.+.
T Consensus 385 L~~ 387 (460)
T PRK11462 385 LAY 387 (460)
T ss_pred HHH
Confidence 765
No 111
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.58 E-value=2.8e-13 Score=116.81 Aligned_cols=290 Identities=15% Similarity=0.108 Sum_probs=154.8
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
+|...++++-.+.|+|.|.... ....++|..|.|.|+...++...........++.++..+ +|||.|++.++...
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~ 207 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSG 207 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHH
Confidence 4677899999999999776654 556689999999998877766655544443445554433 89999999888766
Q ss_pred HHHHHH--hccCCChHHHHHhCCh---HHHHHHHHHH------------------hcCC-cch--HHHHHHH--------
Q 018767 77 LLLVGL--CFVPESPRWLAKVGLD---KEFQVALRKL------------------RGKD-ADI--TREAAEI-------- 122 (350)
Q Consensus 77 ~~~~~~--~~~~esp~~~~~~~~~---~~~~~~~~~~------------------~~~~-~~~--~~~~~~~-------- 122 (350)
+.++.. ++.| |++...++++ .+..+.++.+ .+.. ... .+.....
T Consensus 208 i~~vl~~~fY~P--P~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv 285 (599)
T PF06609_consen 208 IALVLIFFFYFP--PPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLV 285 (599)
T ss_pred HHHHHHHHHhCC--CchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHH
Confidence 644332 2334 3332222211 1111112211 1111 111 1111000
Q ss_pred --HHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhh-hhhHHHHHHHhCCCCc-----hHHHHHHHHHh
Q 018767 123 --QVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGI-GFYTSETFVQAGLSSG-----KLGTILYACVQ 194 (350)
Q Consensus 123 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 194 (350)
-..+.....+++.-..+++|++ |.....+.+.+..... ++.. .+|......-++.+.. .....+.+++.
T Consensus 286 ~F~~wE~~~~~~~Pl~P~~Lf~~~--r~~~~~lvi~fi~G~~-~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~ 362 (599)
T PF06609_consen 286 AFVVWEWFGAPKDPLFPHRLFKDR--RGFAALLVISFISGMN-FFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGS 362 (599)
T ss_pred HHHHhhhhccCCCCcCCHHHhccc--hHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHH
Confidence 0001001111222334566652 2222222222222222 3333 3344433333433331 15667788888
Q ss_pred hhHHhhHhhhhcccCCceee-hhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcc
Q 018767 195 VPITVVGAFLMDKSGRRPLI-MISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSE 273 (350)
Q Consensus 195 ~~~~~~~g~l~d~~grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 273 (350)
.+|..+.|.+..+++|-|.. +++..++.+++..++. ...++ .........+.+.+.+....+.. ..+.-
T Consensus 363 ~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~---~~~~n------~~~~i~~~~l~g~giG~~~~~~~-~~~ql 432 (599)
T PF06609_consen 363 CAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAA---VRPDN------KNAAIAFLVLAGFGIGGILVPAI-VIAQL 432 (599)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHH---ccCCC------cchHHHHHHHHHHhHHHHHHHHH-HeeEe
Confidence 88889999999988875554 4555555544443322 22222 11122222233333333333333 55566
Q ss_pred cCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 274 IFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 274 ~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
..|++.-+++.|+..+++.+|+.++..+...+.
T Consensus 433 ~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 433 IVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred eeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 788888999999999999999999998886554
No 112
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.58 E-value=3e-14 Score=120.78 Aligned_cols=163 Identities=16% Similarity=0.081 Sum_probs=116.8
Q ss_pred cchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccc
Q 018767 163 GINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
.........|.+.++.+.++.+ .......++..++.++.|++.||+|||+.+..+..+..++.+...... +
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~---~---- 92 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN---N---- 92 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc---c----
Confidence 3445555667788888888766 677778888999999999999999999999988888777777664331 1
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHH
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSA 319 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~ 319 (350)
.+.......+.+.+.+...... .+++.|.+|+++|+++.+..+....+|..++|.+.+.+.+. ++...+.+.++
T Consensus 93 ----~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 167 (385)
T TIGR00710 93 ----IETLLVLRFVQAFGASAGSVIS-QALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSL 167 (385)
T ss_pred ----HHHHHHHHHHHHcchhHHHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 2333333333333333333334 48899999999999999999999999999999999988876 44455555555
Q ss_pred hhHHHhhheeeecccCCC
Q 018767 320 FSVITVLFVAKFVPETKG 337 (350)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ 337 (350)
...+..+...+..||+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 168 AGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 555555555455666543
No 113
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.57 E-value=8.3e-14 Score=118.90 Aligned_cols=177 Identities=16% Similarity=0.114 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
++....+.+................|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+.++..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44444445555554445566677778888888888776 6777888999999999999999999999999888877777
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.+...... + .+..+....+.+.+.+...... .+++.|.+|+++|+++.++.+....+|..+++.+.+.
T Consensus 91 ~~~~~~~~---~--------~~~l~~~~~l~G~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 91 TLACGFAP---G--------YITMFIARLVIGIGMGGEYGSS-AAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHhc---c--------HHHHHHHHHHHHhhhhhhhHHH-HHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654321 1 2333444444444444433334 4889999999999999999999999999999999988
Q ss_pred HHhhhc--cchhhHHHHhhHHHhhheeeecccC
Q 018767 305 LMSWSS--SGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 305 l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+.+..+ +...+...++..+..++.....||+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 191 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFALWLRKNIPEA 191 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 876532 3333333333333334333445654
No 114
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=4.3e-14 Score=113.89 Aligned_cols=179 Identities=12% Similarity=0.093 Sum_probs=145.1
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
++.++..++.....+..--.+..-.|.+.++.+++..+ ...+...+...++.++.|.++||.+.|+.+.++++++++.
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~ 107 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIV 107 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHH
Confidence 45555555555555555566777888888888888887 7778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh--
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF-- 302 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~-- 302 (350)
.+++++... .....+...+-+.+.+.+++|.. ..+..-+|++.||+..++-|++.++|+.+.|.+.
T Consensus 108 nil~Gfs~s-----------~~~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l 175 (448)
T COG2271 108 NILFGFSPS-----------LFLFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL 175 (448)
T ss_pred HHHHhhhhH-----------HHHHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccchHHHHHHH
Confidence 999987652 34555556666777788888877 8889999999999999999999999999999999
Q ss_pred HHHHhh-hccchhhHHHHhhHHHhhheeeecccCCC
Q 018767 303 NFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 303 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
+.+..+ ++...|+.-++++++.+++.++..+++.+
T Consensus 176 a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 176 AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 777766 55667777888888888888777776543
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.56 E-value=6e-13 Score=107.52 Aligned_cols=292 Identities=16% Similarity=0.119 Sum_probs=177.0
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc------C----------------
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG------S---------------- 60 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~------~---------------- 60 (350)
++..++.-.+..++.....+...+++.+..++++-++..+.-.....+|..+.-+.. .
T Consensus 115 ~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~ 194 (438)
T COG2270 115 LLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD 194 (438)
T ss_pred HHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc
Confidence 345566777888888888899999999999998888877665555555544443332 1
Q ss_pred CchhhHHHhhchHHHHH-HHHHHhccCCChHHHHHhCCh-HHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhh
Q 018767 61 IIPWRILALTGLVPCVL-LLVGLCFVPESPRWLAKVGLD-KEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIR 138 (350)
Q Consensus 61 ~~~Wr~~f~~~~~~~~~-~~~~~~~~~esp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (350)
...=|..+.+.++.-++ .+...+.++|.++- +... ...++.. + +-..+++
T Consensus 195 ~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~---~~~~~~~l~~g~--------------k-----------~L~~t~k 246 (438)
T COG2270 195 GEDVRITGLLAALWWLLFALPMILNVHDAEKI---SSPPPTALRNGF--------------K-----------ELKSTFK 246 (438)
T ss_pred cccchhHHHHHHHHHHHHHhHHHhcccccccc---cccchHHHHHHH--------------H-----------HHHHHHH
Confidence 11466777776665555 44555666665420 0000 0000000 0 0122455
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeeh
Q 018767 139 DLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIM 215 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~ 215 (350)
+..+++.....++..++.. -+.+.+......+- .++|.++.+ .......+..++|+++.|++.||+|.|+++.
T Consensus 247 ~i~~~~~i~~FLiA~~~~~----DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 247 EIRGRKNLVLFLIARFFYI----DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred HHhcccchHHHHHHHHHHH----hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh
Confidence 5555444333333322222 22333333333333 377888777 5666778899999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHH
Q 018767 216 ISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGA 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 295 (350)
.+.++..+.++..... .. .....+..++.+.+.+ +..+..-++..++.|+++.++.+|+++..++..+
T Consensus 323 ~~lvi~~~~~~~~~~~---~~--------~~~f~i~gll~g~s~G-~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S 390 (438)
T COG2270 323 IGLVILSIAALYLIFL---EG--------ELDFWILGLLVGTSLG-GAQASSRSYLARLVPKGKEGRFFGLYALTGRAAS 390 (438)
T ss_pred HHHHHHHHHHHHHHHc---cc--------cHHHHHHHHHHHHhcc-hHHHHHHHHHHHhCCCccccceeehhhhhhhHHH
Confidence 8887766655554221 11 1222222233333333 3344556899999999999999999999999999
Q ss_pred HHHHHHhHHHHhhhccchh-hHHHHhhHHHhhheeeecccCCCC
Q 018767 296 WAVSYTFNFLMSWSSSGTF-FIYSAFSVITVLFVAKFVPETKGK 338 (350)
Q Consensus 296 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 338 (350)
+++|.+.+.+.+..+.... ....++.....+..+...|+.+++
T Consensus 391 ~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 391 FLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCCCc
Confidence 9999999999887443332 222233333444455666655433
No 116
>PRK09848 glucuronide transporter; Provisional
Probab=99.55 E-value=1.7e-13 Score=118.31 Aligned_cols=252 Identities=12% Similarity=0.066 Sum_probs=138.7
Q ss_pred hhHhhhhhccccccchhhhhhhcccC-ccchhhHHhHHHHH-----HHHHHHHHHHhcCCc------hhhHHHhhchHHH
Q 018767 8 LEDFSTGYGIGVFSYVVPIFIAEIAP-RNLRGLLTTLNQLL-----IVTGSSVAYIIGSII------PWRILALTGLVPC 75 (350)
Q Consensus 8 ~~R~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~G~~~~~~~~~~~------~Wr~~f~~~~~~~ 75 (350)
+.-++.+++.+...+...++..|..+ +++|.+..++-..+ ..+|..++|.++... +|.....+.++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~ 193 (448)
T PRK09848 114 LTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAG 193 (448)
T ss_pred HHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 34456677777777777777777664 46788876665543 234455555554332 1211112222233
Q ss_pred HHH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHH
Q 018767 76 VLL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVS 154 (350)
Q Consensus 76 ~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (350)
++. ++.....||+++. +. ++...+..++++++++.........+
T Consensus 194 ~~~~~~~~~~~~e~~~~---~~--------------------------------~~~~~~~~~~~l~~n~~f~~~~~~~~ 238 (448)
T PRK09848 194 MVLYFICFKSTRENVVR---IV--------------------------------AQPSLKISLQTLKRNRPLFMLCIGAL 238 (448)
T ss_pred HHHHHHHHcCcEeccCC---Cc--------------------------------cCCCHHHHHHHHhCCchHHHHHHHHH
Confidence 332 2233345664310 00 00111224566778776555444333
Q ss_pred HHHHHHhhcchhhhhhHHHHHHH-hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETFVQ-AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+..... .......+++.++ .+.+... .......++.+++.++.+++.||+|+|+.+.++..+..++.+.+..
T Consensus 239 ~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~- 313 (448)
T PRK09848 239 CVLIST----FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW- 313 (448)
T ss_pred HHHHHH----HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-
Confidence 333322 2222334433332 3333322 2223334567788899999999999999999888777776655532
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcc-------hhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPIN-------IKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.+..+ .+.......+.+.+.+... +..++...|..|.+ .+|...|+.+....+|..+++.+.+.
T Consensus 314 --~~~~~------~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 314 --VSVWS------LPVALVALAIASIGQGVTM-TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred --cCchh------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 2222333333344433333 33447777776643 45899999999999999999999998
Q ss_pred HHhh
Q 018767 305 LMSW 308 (350)
Q Consensus 305 l~~~ 308 (350)
+.+.
T Consensus 385 ~l~~ 388 (448)
T PRK09848 385 ILGL 388 (448)
T ss_pred HHHH
Confidence 8764
No 117
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.55 E-value=3.5e-13 Score=112.95 Aligned_cols=259 Identities=14% Similarity=0.090 Sum_probs=158.1
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHH-----HHhcCCch---hhHHHhhchH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVA-----YIIGSIIP---WRILALTGLV 73 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~-----~~~~~~~~---Wr~~f~~~~~ 73 (350)
+++.+++.-++..+......|...++..+...+ +++-.|-.-...++|.+++ ..+.+..+ ....+++.+.
T Consensus 90 ~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 167 (400)
T PF03825_consen 90 SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAI 167 (400)
T ss_pred cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Confidence 456666777777777777888888888887753 2222233333333333333 22333332 2345566555
Q ss_pred HHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 74 PCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 74 ~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
..++.....+.+|+.|.- ++.+. +.++....+..+++|+|+....++..
T Consensus 168 ~~~ll~~~~l~lp~~~~~--~~~~~-----------------------------~~~~~~~~~~~~llk~~~~~~Fll~~ 216 (400)
T PF03825_consen 168 LSLLLAGFALFLPKTPPK--RSAKE-----------------------------SVKKLLGLDALKLLKNPRFLVFLLAA 216 (400)
T ss_pred HHHHHHHHHHhCCCCccc--cccCC-----------------------------CcccccchHHHHHhcCccHHHHHHHH
Confidence 555544445567877620 00000 00111122334678877655544444
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhC-CCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAG-LSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
++.... ......|.+.+.++.| .+... ....+..++.++.-...+++..|+|.|+++.++.+..++=..+++.
T Consensus 217 ~l~~~~----~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 217 FLIGIS----HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHH----HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 3344455566677777 44333 4456677888899999999999999999999888887777666643
Q ss_pred HHHhcccccccCchhHHHH----HHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHH-HHHHHHHHHHHhHHH
Q 018767 231 SFFLKGQNMFLDWVPVLAV----GGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLV-NWSGAWAVSYTFNFL 305 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l 305 (350)
.. ++ .+... +.....+..++....+.. .++.+..|++.|+++.++++.. ..+|..+|..+.|++
T Consensus 293 ~~--~~--------~~~~~~~~~l~q~lhG~tf~~~~~a~~-~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 293 FS--DP--------WPFIVALQLLGQLLHGLTFGLFHAASV-RYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred hc--CC--------cHHHHHHHHHHHhhhhHHHHHHHHHHH-HHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 21 11 11111 112345656666555555 8999999999999999998876 679999999999999
Q ss_pred Hhh
Q 018767 306 MSW 308 (350)
Q Consensus 306 ~~~ 308 (350)
.|.
T Consensus 362 ~~~ 364 (400)
T PF03825_consen 362 YDA 364 (400)
T ss_pred HHH
Confidence 987
No 118
>PRK03545 putative arabinose transporter; Provisional
Probab=99.55 E-value=1.5e-13 Score=116.57 Aligned_cols=157 Identities=15% Similarity=0.063 Sum_probs=112.7
Q ss_pred hhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCch
Q 018767 167 IGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWV 244 (350)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
.....|.+.++++.+..+ +......++..++.+..|++.||+|||+++..+..+..++.+...... +
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---~-------- 96 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW---N-------- 96 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc---c--------
Confidence 334567788888888777 556667778888889999999999999999999888888777664432 1
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHH
Q 018767 245 PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVI 323 (350)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 323 (350)
.+..+....+.+.+.+. ..+...+++.|.+|+++|+++.|+......+|..++|.+.+.+.+. ++...+++.+++..+
T Consensus 97 ~~~l~~~r~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l 175 (390)
T PRK03545 97 FTVLLISRIGIAFAHAI-FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALI 175 (390)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 23333333333333322 3344448889999999999999999999999999999999988776 555566666666655
Q ss_pred HhhheeeecccC
Q 018767 324 TVLFVAKFVPET 335 (350)
Q Consensus 324 ~~~~~~~~~~~~ 335 (350)
..+......|+.
T Consensus 176 ~~~~~~~~~~~~ 187 (390)
T PRK03545 176 TLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHhCCCC
Confidence 554444445543
No 119
>TIGR00895 2A0115 benzoate transport.
Probab=99.55 E-value=4e-14 Score=120.54 Aligned_cols=175 Identities=16% Similarity=0.091 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHH
Q 018767 149 VIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCF 226 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 226 (350)
......+..+...........+.|.+.++.+.+..+ .......++.+++.++.|+++||+|||+.+..+..+..++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 97 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTL 97 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 333333333333333455667778888888887665 666777788899999999999999999999988877777666
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 227 LAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
+.... .+ .+.......+.+.+.+.. .+...+++.|.+|++.|+++.++.+....+|..+++.+.+.+.
T Consensus 98 ~~~~~---~~--------~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 98 LCALA---TN--------VTQLLILRFLAGLGLGGL-MPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred HHHHc---cc--------hHHHHHHHHHHhcccccc-hhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 65432 11 233333333333333333 3444589999999999999999999999999999999999888
Q ss_pred hh-hccchhhHHHHhhHHHhhheeeecccC
Q 018767 307 SW-SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 307 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+. ++...+.+.+++..+..++...+.+|+
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 166 PVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred hcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 76 444455555445555544444555654
No 120
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.55 E-value=1.1e-13 Score=117.74 Aligned_cols=160 Identities=17% Similarity=0.083 Sum_probs=118.2
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.......|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+.++..++........ +
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~---~------ 81 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG---A------ 81 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc---C------
Confidence 44556667777888888766 777888899999999999999999999999998888777777664432 1
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFS 321 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (350)
.+.......+.+.+.+... +....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+. ++...+...++..
T Consensus 82 --~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 82 --YVSLYILRVLLGAAEAPFF-PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred --HHHHHHHHHHHHHHHHhhh-hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 3444444445554444444 44448999999999999999999999999999999999987766 4445555555555
Q ss_pred HHHhhheeeecccCC
Q 018767 322 VITVLFVAKFVPETK 336 (350)
Q Consensus 322 ~~~~~~~~~~~~~~~ 336 (350)
.+..+...+..+|++
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 159 IIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHhhheecCCC
Confidence 555555555555543
No 121
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.54 E-value=2.3e-13 Score=115.21 Aligned_cols=156 Identities=15% Similarity=0.074 Sum_probs=112.3
Q ss_pred hhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchh
Q 018767 168 GFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVP 245 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (350)
....|.+.++.+.+..+ .......++..++.++.|++.||+|||+.+..+.++..++.+..... ++ .
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---~~--------~ 108 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA---NS--------F 108 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH---Ch--------H
Confidence 33566677888888776 56667788888999999999999999999999999888877665432 11 2
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHH
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVIT 324 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 324 (350)
+..++...+.+.+.+.. .+...+++.|.+|+++|+.+.+.......+|..++|.+.+.+.+. ++...+++.+++.++.
T Consensus 109 ~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 109 SLLLIGRACLGLALGGF-WAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHHHHHHHHhhHHH-HHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 33444444444444443 344458889999999999999999999999999999999999876 4445555555544444
Q ss_pred hhheeeecccC
Q 018767 325 VLFVAKFVPET 335 (350)
Q Consensus 325 ~~~~~~~~~~~ 335 (350)
.+......||+
T Consensus 188 ~l~~~~~~p~~ 198 (394)
T PRK10213 188 IFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHCCCC
Confidence 33333334554
No 122
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=2.2e-13 Score=116.60 Aligned_cols=187 Identities=17% Similarity=0.092 Sum_probs=117.7
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceee
Q 018767 137 IRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLI 214 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~ 214 (350)
++.+.+++.++.......+..+. ........|.+.++.+.+..+ .......++..+++++.|+++||+|||+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l 85 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFG----LGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI 85 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE
Confidence 33444555555544443333332 344455667777777666554 777778888899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHH
Q 018767 215 MISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSG 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 294 (350)
..+..+..++...+........++ .+.......+.+.+.+....+.. +.+.|..|+++|+++.++.+....+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (417)
T PRK10489 86 LLARGTCGLGFIGLALNAFLPEPS------LLAIYLLGLWDGFFGSLGVTALL-AATPALVGRENLMQAGAITMLTVRLG 158 (417)
T ss_pred EehHHHHHHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHh-hhhhhccCHHHHHHHHHHHHHHHhHH
Confidence 988777766665543322211111 22233333333333333333344 78889999999999999999999999
Q ss_pred HHHHHHHhHHHHhhh-ccchhhHHHHhhHHHhhheeeecccC
Q 018767 295 AWAVSYTFNFLMSWS-SSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 295 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
..++|.+.+.+.+.. +.+.+.+.++... ...+..+..|++
T Consensus 159 ~~~g~~l~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 199 (417)
T PRK10489 159 SVISPALGGLLIAAGGVAWNYGLAAAGTF-ITLLPLLRLPAL 199 (417)
T ss_pred HHhHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHhCCCC
Confidence 999999999988763 3344444333333 333333444543
No 123
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.53 E-value=1.1e-13 Score=118.16 Aligned_cols=160 Identities=16% Similarity=0.091 Sum_probs=112.4
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
........|.+.++.+.++.+ .......++..++.++.|+++||+|||+.+..+.++..++.+..... .+
T Consensus 31 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~~----- 102 (406)
T PRK11551 31 LQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA---WD----- 102 (406)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh---cc-----
Confidence 445566677888888888766 77777888999999999999999999999998887777666554332 11
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (350)
.+..++...+.+.+.+... +...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+. ++...+++.+++
T Consensus 103 ---~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (406)
T PRK11551 103 ---FPSLLVARLLTGVGLGGAL-PNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVG 178 (406)
T ss_pred ---HHHHHHHHHHHHhhHHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 2333444444444444333 34448899999999999999999999999999999988777665 333445554544
Q ss_pred hHHHhhheeeecccC
Q 018767 321 SVITVLFVAKFVPET 335 (350)
Q Consensus 321 ~~~~~~~~~~~~~~~ 335 (350)
..+..+....++||+
T Consensus 179 ~~~~~~~~~~~l~~~ 193 (406)
T PRK11551 179 PLLLVPLLMRWLPES 193 (406)
T ss_pred HHHHHHHHHHhCCCC
Confidence 444444444455654
No 124
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=3.4e-13 Score=109.89 Aligned_cols=172 Identities=15% Similarity=0.059 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHH
Q 018767 150 IIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFL 227 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 227 (350)
++.+.+..+...+.-+...-.+|.+.++++.+... .....+..+..++.++...+.||+.||++++....++.++.++
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l 94 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL 94 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 33344444444444556677788899999999887 8888999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 228 AGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
.++... ....++.-.+.+...+. +.++..+++.++.|+++|+++.++.+....+...+|..++.++.+
T Consensus 95 ~alAp~-----------f~~Ll~aR~~~g~a~G~-f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 95 SALAPS-----------FAVLLLARALAGLAHGV-FWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHhcc-----------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 876643 23344444444444444 445555999999999999999999999999999999999999998
Q ss_pred h-hccchhhHHHHhhHHHhhheeeecc
Q 018767 308 W-SSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 308 ~-~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
. ++...|+..+.+.++..+..+..+|
T Consensus 163 ~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 163 LFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7 6778888899888888888888888
No 125
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.52 E-value=5.4e-14 Score=115.75 Aligned_cols=280 Identities=13% Similarity=0.084 Sum_probs=161.6
Q ss_pred hhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc---hhhHHHhhchHHHHHHHHHHhc-cCCCh
Q 018767 14 GYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---PWRILALTGLVPCVLLLVGLCF-VPESP 89 (350)
Q Consensus 14 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---~Wr~~f~~~~~~~~~~~~~~~~-~~esp 89 (350)
|+...+..|..-+++.++.. +.+.=.|=.-+..++|.+++..+++.+ +=+..||+....+++..++... -|+.+
T Consensus 115 ~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~ 192 (412)
T PF01306_consen 115 GLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVP 192 (412)
T ss_dssp TTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SS
T ss_pred HHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCc
Confidence 33333444555555555432 223333444455556666666665554 4567788777666654444333 33433
Q ss_pred HHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhh
Q 018767 90 RWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGF 169 (350)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (350)
+....++..+ . ++++.+.+...+++|+++.+...+....... .+..+-.
T Consensus 193 ~~~~~~~~~~---------------~------------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~----~Y~vfdq 241 (412)
T PF01306_consen 193 PQAEVADALG---------------A------------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAA----IYDVFDQ 241 (412)
T ss_dssp SSS-SSTTSS---------------S------------------HHHHHHHTTSHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred hhhhhhcccc---------------c------------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHH----HHHHHHH
Confidence 1100000000 0 0000111234566666554444332222221 1333333
Q ss_pred hHHHHHHHhCCCCch------HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCc
Q 018767 170 YTSETFVQAGLSSGK------LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDW 243 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (350)
..+.++....-+..+ .......+..++...+..++.+|+|.|+.++++..++.+=....++...
T Consensus 242 qf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~---------- 311 (412)
T PF01306_consen 242 QFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN---------- 311 (412)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S----------
T ss_pred HHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc----------
Confidence 344444433322211 5566777888889999999999999999999998888887777644322
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHH-HHHHHHHHHHHHHHhHHHHhhh-ccchhhHHHHhh
Q 018767 244 VPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLV-VLVNWSGAWAVSYTFNFLMSWS-SSGTFFIYSAFS 321 (350)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 321 (350)
++.....-.+.+.-+.....+.. -|+.+.+|++..++...+. +....+|..+.+.+.|.+.|+. ....+++++.+.
T Consensus 312 -~~~i~~~klLH~~e~~l~lva~f-kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv 389 (412)
T PF01306_consen 312 -PWVISLIKLLHALEFPLLLVAAF-KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIV 389 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHH
Confidence 45556666666666666555665 8999999999988998885 5678999999999999999984 456788888887
Q ss_pred HHHhhheeeecccCCCC
Q 018767 322 VITVLFVAKFVPETKGK 338 (350)
Q Consensus 322 ~~~~~~~~~~~~~~~~~ 338 (350)
....++..+.+++.++.
T Consensus 390 ~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 390 LPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHS--SSST
T ss_pred HHHHHHheeeecCCCcc
Confidence 77777777777665543
No 126
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.52 E-value=2.8e-13 Score=112.70 Aligned_cols=257 Identities=16% Similarity=0.103 Sum_probs=159.2
Q ss_pred hhhHhhhhhccccccchhhhhhhcccC-ccchhhHHhHHHHHHHHHHHHHHHhcCCc-----------hhhHHHhhchHH
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAP-RNLRGLLTTLNQLLIVTGSSVAYIIGSII-----------PWRILALTGLVP 74 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----------~Wr~~f~~~~~~ 74 (350)
++.-.+.+++.......-.++..|..+ ++||.+..++-+.+.++|.++...+...+ ||+..-.+.+++
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 445566777778787888888888875 68899999999999999866654433222 688887777777
Q ss_pred HHHHHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHH
Q 018767 75 CVLLLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGV 153 (350)
Q Consensus 75 ~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (350)
+++.++. ++.++|.+. ..+..++ ..+.+.+.++..+++|+.++......
T Consensus 196 ~~i~~l~~~~~v~ER~~--~~~~~~~----------------------------~~~~~~~~~~~~~~~Nrp~~~~l~~~ 245 (467)
T COG2211 196 GVILLLFCFFNVKERVV--ETQPTKT----------------------------GVKLKLKDSFLLIFKNRPLLLLLLMN 245 (467)
T ss_pred HHHHHHHHHHHhhcccC--ccccCcc----------------------------cccccHHHHHHHHHccchHHHHHHHH
Confidence 7765544 444666442 0000000 00111122344567776655554433
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCch----HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGK----LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAG 229 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 229 (350)
.+..... +.......++. ++..+... ........+.+++.++..++.+|+|+|+++..+.++.+++.+++.
T Consensus 246 l~~~~~~----~i~~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 246 LLLFIAF----NIRGSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred HHHHHHH----HHHhhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 3333222 22222222222 22233322 344555566666689999999999999999999888888888774
Q ss_pred HHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-------cchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 230 TSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-------INIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
+.. .+ .........+..........+++|++++|... .+..|...+.+.++.-+|.+++..+.
T Consensus 321 f~~---~~-------~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 321 FTP---AG-------SVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred hhc---Cc-------chHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 433 21 13333333333334444556788899988753 22338888999999999999999999
Q ss_pred HHHHhh
Q 018767 303 NFLMSW 308 (350)
Q Consensus 303 ~~l~~~ 308 (350)
|+..+.
T Consensus 391 g~~L~~ 396 (467)
T COG2211 391 GWILGA 396 (467)
T ss_pred HHHHHH
Confidence 988765
No 127
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.52 E-value=1.7e-13 Score=116.40 Aligned_cols=172 Identities=15% Similarity=0.126 Sum_probs=118.2
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~ 230 (350)
..........+........|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+.....++......
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 33333333334455556788888888888766 5666777888899999999999999999999888777777666543
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-h
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-S 309 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~ 309 (350)
.. + .+.......+.+.+.+.. .+...+++.|.+|+++|+++.+..+....++..++|.+.+.+.+. +
T Consensus 88 ~~---~--------~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 88 AE---T--------SSLFLAGRFLQGIGAGCC-YVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred hC---c--------HHHHHHHHHHHHhhhhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 21 1 222233333333333322 234458899999999999999999999999999999998887765 4
Q ss_pred ccchhhHHHHhhHHHhhheeeecccCC
Q 018767 310 SSGTFFIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
+...+.+.+++..+..++...+.+|++
T Consensus 156 ~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 156 WQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 445566666666655555555556654
No 128
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.51 E-value=3.2e-13 Score=116.07 Aligned_cols=150 Identities=17% Similarity=0.045 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHH
Q 018767 150 IIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFL 227 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 227 (350)
.....+.............+..|.+.++.+.++.+ .......++..++.++.|+++||+|||+.+..+.+...++...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 99 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL 99 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 33334444443334455566667777888888766 6677788889999999999999999999999999888888777
Q ss_pred HHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 228 AGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
...... .+...+...+.+.+.+... +....++.|.+|+++|+++.++......+|..+++.+.+.+.+
T Consensus 100 ~~~~~~-----------~~~l~~~r~l~G~g~g~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 100 SGLASG-----------VIMLTLSRFIVGMGMAGEY-ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHhH-----------HHHHHHHHHHHHHHHhhHH-HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 654421 2333333344443333333 3344889999999999999999999999999999998888776
Q ss_pred hhcc
Q 018767 308 WSSS 311 (350)
Q Consensus 308 ~~~~ 311 (350)
..++
T Consensus 168 ~~~w 171 (426)
T PRK12307 168 AYGW 171 (426)
T ss_pred cCCH
Confidence 5333
No 129
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.51 E-value=6.6e-13 Score=115.11 Aligned_cols=157 Identities=12% Similarity=-0.011 Sum_probs=104.1
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
........|.+.++++.+..+ .......++..++.++.|+++||+|||+++..+.++..++.++.+... +
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---s----- 123 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS---S----- 123 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc---C-----
Confidence 345556677788888988766 555667778888999999999999999998887777776665554321 1
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh----h------hcc
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS----W------SSS 311 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----~------~~~ 311 (350)
.....+...+.+.+.+ ...+.. .++.|.+|++.|+++.|+.+...++|..+++.+.+.+.. . ++.
T Consensus 124 ---~~~l~~~r~l~G~~~~-~~~~~~-~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr 198 (476)
T PLN00028 124 ---ATGFIAVRFFIGFSLA-TFVSCQ-YWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWR 198 (476)
T ss_pred ---HHHHHHHHHHHHHHHH-hhHHHH-HHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhH
Confidence 2222233333333322 233333 678899999999999999998888888888776655432 1 344
Q ss_pred chhhHHHHhhHHHhhheeeecc
Q 018767 312 GTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
..+.+.+++.++.++..+++.+
T Consensus 199 ~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 199 IAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 5566666666555544444333
No 130
>PRK03699 putative transporter; Provisional
Probab=99.50 E-value=5.7e-13 Score=113.05 Aligned_cols=167 Identities=8% Similarity=-0.071 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
++..+.+.+..+.............|.+.++.+.+..+ .......++..++.++.|++.||+|||+.+..+.++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44444444444444333456677778888888888766 6667778889999999999999999999998888777777
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
..+.... ++ .+.......+.+.+.+...... ..++.|.+|++.|+.+.+..+....+|+.++|.+.+.
T Consensus 86 ~~l~~~~---~~--------~~~~~~~~~l~G~~~g~~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 153 (394)
T PRK03699 86 VAGLMFS---HS--------LALFSIAMFVLGVVSGITMSIG-TFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAY 153 (394)
T ss_pred HHHHHHc---ch--------HHHHHHHHHHHHHhhHhhccch-hHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665432 11 2333333444444444444344 4788999999999999999888888999999999888
Q ss_pred HHhh--hccchhhHHHHhhHHHh
Q 018767 305 LMSW--SSSGTFFIYSAFSVITV 325 (350)
Q Consensus 305 l~~~--~~~~~~~~~~~~~~~~~ 325 (350)
+.+. ++...+...+++.++..
T Consensus 154 l~~~~~gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 154 LLARSIEWYWVYACIGLVYVAIF 176 (394)
T ss_pred HHhccccHHHHHHHHHHHHHHHH
Confidence 7653 44455555555444443
No 131
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.50 E-value=1.3e-13 Score=120.62 Aligned_cols=169 Identities=15% Similarity=0.104 Sum_probs=120.7
Q ss_pred HHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 155 LMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
+..+.............|.+.++.+.+..+ +......++..++.++.|+++||+|||+.+..+..+..++.++....
T Consensus 9 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~- 87 (485)
T TIGR00711 9 LGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA- 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-
Confidence 333333333456667788888888887665 77788889999999999999999999999999888888877766432
Q ss_pred HhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hcc
Q 018767 233 FLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSS 311 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~ 311 (350)
++ ....+....+.+.+.+ ...+...+++.|.+|++.|+++.++......+|..++|.+.+.+.++ ++.
T Consensus 88 --~~--------~~~l~~~~~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 88 --PN--------LELMIIFRVIQGFGGG-PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred --CC--------HHHHHHHHHHHHhhhh-hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 11 2333333333333333 33445558999999999999999999999999999999999998876 455
Q ss_pred chhhHHHHhhHHHhhheeeecccC
Q 018767 312 GTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+.+++.+.+..+..++..+..|++
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCc
Confidence 556655555554444444445544
No 132
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=5e-13 Score=117.18 Aligned_cols=156 Identities=13% Similarity=-0.005 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
++.+..+.+..+.............|.+.++++.+..+ .......++..++.++.|++.||+|||+.+..+..+..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 98 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG 98 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 33444444444444444455566677888888888766 6666777888899999999999999999999888888777
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.+....... .+.......+.+.+.+... +....++.|.+|++.|+.+.++.+....+|..++|.+.+.
T Consensus 99 ~~~~~~~~~-----------~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 99 TLACGFAPG-----------YWTLFIARLVIGMGMAGEY-GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHhH-----------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776654321 2333333333333333333 3334889999999999999999999999999999999998
Q ss_pred HHhhhccchh
Q 018767 305 LMSWSSSGTF 314 (350)
Q Consensus 305 l~~~~~~~~~ 314 (350)
+.+..++...
T Consensus 167 l~~~~~w~~~ 176 (496)
T PRK03893 167 VVPVWGWRAL 176 (496)
T ss_pred HhccCCHHHH
Confidence 8876444333
No 133
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.49 E-value=2.3e-13 Score=113.93 Aligned_cols=151 Identities=18% Similarity=0.133 Sum_probs=111.5
Q ss_pred hhhhhhHH-HHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 165 NGIGFYTS-ETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 165 ~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
.......| .+.++.+.+..+ +......++..++.++.|+++||+|||+.+..+.++..++.....+. .+
T Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~~----- 84 (352)
T PF07690_consen 13 SIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA---SN----- 84 (352)
T ss_dssp HHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---CC-----
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---hh-----
Confidence 34455556 566777877766 77777888999999999999999999999998888888884444321 11
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (350)
.+..+....+.+.+.+... +....++.|.+|+++|+++.+..+....+|..++|.+.+.+.+. ++...+++.+++
T Consensus 85 ---~~~~~~~~~l~g~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 85 ---FWLLLIARFLLGIGSGFFS-PASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp ---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred ---HHHHhhhcccccccccccc-ccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 3434444444444444444 44459999999999999999999999999999999999998855 555667777777
Q ss_pred hHHHhhh
Q 018767 321 SVITVLF 327 (350)
Q Consensus 321 ~~~~~~~ 327 (350)
..+..++
T Consensus 161 ~~~~~il 167 (352)
T PF07690_consen 161 SLIAAIL 167 (352)
T ss_dssp HHHHHHH
T ss_pred hhhhhhh
Confidence 7766654
No 134
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.49 E-value=3.8e-13 Score=117.35 Aligned_cols=176 Identities=14% Similarity=0.100 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHH
Q 018767 149 VIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCF 226 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 226 (350)
.+....+..+....-...+....|.+.++++.+..+ +....+.++...+.+..|+++||+|||+.+..+..+..++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 344444455554444566777788898898887655 677777888888899999999999999999999999888888
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccC-CcchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 227 LAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIF-PINIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
..+... + .+..+....+.+.+.+.. .+.....+.+.+ |+++|+++.|+......+|..++|.+.+.+
T Consensus 87 ~~~~a~---~--------~~~li~~r~l~G~g~~~~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l 154 (495)
T PRK14995 87 AAAFSP---T--------ASWLIATRALLAIGAAMI-VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154 (495)
T ss_pred HHHHcC---C--------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 775431 1 233444444444444333 333335555554 778999999999999999999999999999
Q ss_pred Hhh-hccchhhHHHHhhHHHhhheeeecccCC
Q 018767 306 MSW-SSSGTFFIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 306 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
.++ ++.+.+++...+..+..++..++.|+++
T Consensus 155 ~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 155 LEHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 887 5556666655555555555555566543
No 135
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.49 E-value=6.7e-13 Score=113.06 Aligned_cols=160 Identities=16% Similarity=0.073 Sum_probs=113.2
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
......+|.+.++++.+... .......++..++.++.|+++||+|||+++..+..+..++.+..... ++
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~------ 103 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT---TS------ 103 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc---CC------
Confidence 34444556667778877665 66777788889999999999999999999998888777776665432 11
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFS 321 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (350)
....+....+.+.+.+ ...+..+.+..|.+|++.|+++.++.+....++..++|.+.+.+.+. ++...+++.++..
T Consensus 104 --~~~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~ 180 (413)
T PRK15403 104 --MTQFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMG 180 (413)
T ss_pred --HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2333333333333332 22344457888999999999999999999999999999999988876 5556666666655
Q ss_pred HHHhhheeeecccCC
Q 018767 322 VITVLFVAKFVPETK 336 (350)
Q Consensus 322 ~~~~~~~~~~~~~~~ 336 (350)
.+..+...+..||++
T Consensus 181 ~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 181 LIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHhCCCCc
Confidence 555544445567654
No 136
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.48 E-value=6.7e-13 Score=114.17 Aligned_cols=179 Identities=12% Similarity=0.103 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHH
Q 018767 148 SVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGC 225 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 225 (350)
..+....+................|.+.+ .+.+..+ +......++..++.++.|+++||+|||+.+..+.++..++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~ 105 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM 105 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH
Confidence 33343444333333333334455665554 5777766 67778888999999999999999999999988877777776
Q ss_pred HHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 226 FLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
+.........+ + .........+.+.+.+....+.. ..+.|.+|+++|+++.++.+....+|+.+++.+.+..
T Consensus 106 ~~~~~~~~~~~-~------~~~l~~~~~l~g~~~g~~~~~~~-~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 106 LLMGFVPWATS-S------IAIMFVLLFLNGWFQGMGWPPCG-RTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHhccccccc-h------HHHHHHHHHHHHHHhhcchHHHH-HHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 66533211100 0 12222333333444444444444 7788999999999999999999999999998887754
Q ss_pred Hh-h-hccchhhHHHHhhHHHhhheeeecccC
Q 018767 306 MS-W-SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 306 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
.+ . ++...+++.+++.++..+..+++.||+
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 43 2 445556666666666555555555553
No 137
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.48 E-value=6.6e-13 Score=112.18 Aligned_cols=160 Identities=17% Similarity=0.054 Sum_probs=115.1
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.......|.+.++.+.+..+ .......++..++.++.|++.||+|||+++..+..+..++.++.+... +
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~---~------ 90 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS---S------ 90 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC---c------
Confidence 44555777788888888766 777888899999999999999999999999999888888777664431 1
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFS 321 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (350)
.+..++...+.+.+.+... +.......|.+|+++|+.+.+.......++..++|.+.+.+.+. ++...+.+.+++.
T Consensus 91 --~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~ 167 (382)
T PRK10091 91 --YLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFN 167 (382)
T ss_pred --HHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHH
Confidence 2333444444443333333 33347788999999999999999999999999999999888775 4445566666555
Q ss_pred HHHhhheeeecccCC
Q 018767 322 VITVLFVAKFVPETK 336 (350)
Q Consensus 322 ~~~~~~~~~~~~~~~ 336 (350)
.+..+......||.+
T Consensus 168 ~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 168 IAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHhCCCCC
Confidence 554444444566643
No 138
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.48 E-value=8.7e-14 Score=113.31 Aligned_cols=186 Identities=15% Similarity=0.069 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
...+...++....+..--+.+....+...+.++.++.. +......+..+++++++|++.||+.||+++.+|..+..++
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 33444444445544444455555566666667777665 8888999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.+..++... .|..++.-.+.+.+-. .+.++..++++|.+|..+|+++.++.+.....|..+|-.....
T Consensus 112 v~~~~fs~~-----------Fwq~~l~R~~vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 112 VFASGFSNH-----------FWQVLLCRGFVGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred HHHHHHHHH-----------HHHHHHHHHHhccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 888877632 3444554444444444 4455555999999999999999999999999999998888877
Q ss_pred HHhh-h-ccchhhHHHHhhHHHhhheeeecccCCCCCHHHHH
Q 018767 305 LMSW-S-SSGTFFIYSAFSVITVLFVAKFVPETKGKTLEQIQ 344 (350)
Q Consensus 305 l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (350)
+.+. + +.+.+...+++.++++++..++.+|++++..++.+
T Consensus 180 va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 180 VASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred eccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 7765 2 56678888888888888888888887765444433
No 139
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.48 E-value=2e-13 Score=115.42 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=114.8
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
...+....|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+..+..++.++......
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-------- 82 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS-------- 82 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh--------
Confidence 345566677787888888766 7777888999999999999999999999999998888887777654421
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHH-HhHHHHhh-hccchhhHHHH
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSY-TFNFLMSW-SSSGTFFIYSA 319 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~-~~~~l~~~-~~~~~~~~~~~ 319 (350)
.+..++...+.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+. ++...+.+.+.
T Consensus 83 ---~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00881 83 ---LWVMAALWALNGIFQGMG-WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGI 158 (379)
T ss_pred ---HHHHHHHHHHHHhhcccc-CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHH
Confidence 233344444444333433 3444589999999999999999999999999999994 55555544 44455555565
Q ss_pred hhHHHhhheeeecccC
Q 018767 320 FSVITVLFVAKFVPET 335 (350)
Q Consensus 320 ~~~~~~~~~~~~~~~~ 335 (350)
+..+..++..++.+|+
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 159 IAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHHHheeeCCC
Confidence 5555555555555543
No 140
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.48 E-value=6.9e-13 Score=111.60 Aligned_cols=152 Identities=11% Similarity=-0.087 Sum_probs=106.9
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.......|.+..+.+.+..+ .......++..++.++.|+++||+|||+.+..+..+..++.............+
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 91 (365)
T TIGR00900 16 AITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLN---- 91 (365)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCc----
Confidence 34445556666677766655 667778888999999999999999999999988887777766665443222111
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFS 321 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (350)
.+.......+.+.+.+... +...+++.|.+|+++|+++.+..+....+|..++|.+.+.+.+. ++...++..++..
T Consensus 92 --~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~ 168 (365)
T TIGR00900 92 --IWQVYVLAGILAIAQAFFT-PAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGF 168 (365)
T ss_pred --HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2334444444444444433 44448999999999999999999999999999999999998876 4344444444433
Q ss_pred HH
Q 018767 322 VI 323 (350)
Q Consensus 322 ~~ 323 (350)
.+
T Consensus 169 ~~ 170 (365)
T TIGR00900 169 AI 170 (365)
T ss_pred HH
Confidence 33
No 141
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.48 E-value=1e-12 Score=113.55 Aligned_cols=160 Identities=11% Similarity=0.031 Sum_probs=104.9
Q ss_pred hhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCch
Q 018767 167 IGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWV 244 (350)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
+....|++.++ +.+..+ .......++..+++++.|+++||+|||+++..+.++..++.+.+........ +
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~-~------ 119 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATS-S------ 119 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccc-c------
Confidence 45566776665 777666 6677888889999999999999999999999888888777776644321110 0
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHH-HHHHhHHHHh-hhccchhhHHHHhhH
Q 018767 245 PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWA-VSYTFNFLMS-WSSSGTFFIYSAFSV 322 (350)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~-~~~~~~~~~~~~~~~ 322 (350)
.+..+....+.+.+.+....+.. ..+.|.+|++.|+++.++.+....+|+.+ +|.+...+.. .++...+++.+.+..
T Consensus 120 ~~~~~~~~~l~gi~~g~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 120 IAVMFVLLFLCGWFQGMGWPPCG-RTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHHHHHHHHHhccchHHH-HHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 22333333344444444433444 67889999999999999999998888644 5544332322 244455666555555
Q ss_pred HHhhheeeecccC
Q 018767 323 ITVLFVAKFVPET 335 (350)
Q Consensus 323 ~~~~~~~~~~~~~ 335 (350)
+..++..++.||+
T Consensus 199 ~~~~l~~~~~~~~ 211 (452)
T PRK11273 199 LVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHccCC
Confidence 5555555555654
No 142
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.47 E-value=1.8e-12 Score=110.23 Aligned_cols=160 Identities=14% Similarity=0.109 Sum_probs=110.1
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.......|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+.....++.+..... ++
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---~~------ 95 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA---HS------ 95 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---cc------
Confidence 33444567778888888776 66777888899999999999999999999988887777766665332 11
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFS 321 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (350)
.+..+....+.+.+.+. ..+....+..|.++.+.++.+.+..+....++..++|.+.+.+.+. ++...+.+.++..
T Consensus 96 --~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~ 172 (394)
T PRK11652 96 --LTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLG 172 (394)
T ss_pred --HHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 22233333333333222 2233446778888988899999999999999999999999988776 4444555555555
Q ss_pred HHHhhheeeecccCC
Q 018767 322 VITVLFVAKFVPETK 336 (350)
Q Consensus 322 ~~~~~~~~~~~~~~~ 336 (350)
.+..+...++.||++
T Consensus 173 ~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 173 AGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHhCCccC
Confidence 444444444566653
No 143
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.47 E-value=1.4e-12 Score=110.71 Aligned_cols=157 Identities=15% Similarity=0.118 Sum_probs=108.4
Q ss_pred hhhhhHH-HHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 166 GIGFYTS-ETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
....+.+ ++.++.+.+... .......+...+..++.|+++||+|||+.+..+.....++.+.+... ++
T Consensus 28 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~---~~------ 98 (400)
T PRK11646 28 VVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA---HE------ 98 (400)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh---cc------
Confidence 3333444 345667877665 55566677777888999999999999999999888888877776432 11
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhH
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSV 322 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (350)
.+.......+.+.+.+. ..+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.++...+++.+....
T Consensus 99 --~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~ 175 (400)
T PRK11646 99 --PWLLWLSCILSGLGGTL-FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFV 175 (400)
T ss_pred --HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 23333333333333332 233334888999999999999999999999999999999999986555566666555555
Q ss_pred HHhhheeeeccc
Q 018767 323 ITVLFVAKFVPE 334 (350)
Q Consensus 323 ~~~~~~~~~~~~ 334 (350)
+..++...+.||
T Consensus 176 ~~~i~~~~~~~~ 187 (400)
T PRK11646 176 LAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHhCCc
Confidence 444443344454
No 144
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.46 E-value=1.3e-11 Score=100.11 Aligned_cols=261 Identities=15% Similarity=0.079 Sum_probs=168.3
Q ss_pred hhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-----hhhHHHhhc--hHHHHHHH
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-----PWRILALTG--LVPCVLLL 79 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-----~Wr~~f~~~--~~~~~~~~ 79 (350)
.+.-.+.|+|.+.......+++.|..|+|+|+++.++......+|.+++..+.+.+ .=|..-.+. ++..+..-
T Consensus 93 ~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~ 172 (403)
T PF03209_consen 93 ALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLN 172 (403)
T ss_pred HHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999998877655 223222222 22222222
Q ss_pred HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHH
Q 018767 80 VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQ 159 (350)
Q Consensus 80 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++..+-.|.++....+ ..++++......++++..+++.++.+...++....
T Consensus 173 ~ia~wg~E~r~~~~~~-----------------------------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a 223 (403)
T PF03209_consen 173 LIALWGQEPRRSRRAA-----------------------------AAERPRPPFREAWRQVWASPQARRFFVFLFLGTLA 223 (403)
T ss_pred HHHHHhcccCCccccc-----------------------------CCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHH
Confidence 2222323322100000 00001112233456667777766666544444332
Q ss_pred HhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhc-ccCCceeehhhhHHHHHHHHHHHHHHHhcc
Q 018767 160 QFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMD-KSGRRPLIMISAAGTFLGCFLAGTSFFLKG 236 (350)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d-~~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
.+.--..+- |+--+-++++..+ ..+...+.+.++|....|++.. |.++++...+++....++...+.......+
T Consensus 224 ~~~QD~iLE---Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~ 300 (403)
T PF03209_consen 224 FFMQDVILE---PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS 300 (403)
T ss_pred HHhhHHHcC---CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 111001111 2222335666665 7788888999999999998766 677788777888888777777665544433
Q ss_pred cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 237 QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.+.......+++.+.+....... +.+.|+.++++.|...|.-...+.+...++..++|.+.|.
T Consensus 301 --------~~~~~~~~~l~G~g~G~f~vgal-s~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 301 --------PWLFRPGVFLLGLGNGLFTVGAL-SLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred --------chHHHHHHHHHHHhhhHHHHHHH-HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555566655555544454 7788888888899999999999999999999999988774
No 145
>PRK10504 putative transporter; Provisional
Probab=99.45 E-value=1.3e-12 Score=113.80 Aligned_cols=169 Identities=14% Similarity=0.078 Sum_probs=115.8
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
.+..+.............|.+.++.|.+..+ +......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 16 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 95 (471)
T PRK10504 16 AFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS 95 (471)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444434456677888888899888766 55666777888899999999999999999988877777666554322
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hc
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SS 310 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~ 310 (350)
++ .+.......+.+.+.+.. .+...+++.|.+|++.|+++.++.+....+|..++|.+.+.+.+. ++
T Consensus 96 ---~~--------~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw 163 (471)
T PRK10504 96 ---GT--------LNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW 163 (471)
T ss_pred ---CC--------HHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence 11 233333344444443333 344458889999999999999999999999999999999999886 33
Q ss_pred cchhhHHHHhhHHHhhheeeeccc
Q 018767 311 SGTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
...+.+......+..+......++
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 445555544444444444333343
No 146
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.45 E-value=2.2e-12 Score=110.01 Aligned_cols=161 Identities=16% Similarity=0.080 Sum_probs=110.8
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
...+....|.+.++++.+..+ .......++..++.++.|+++||+|||+.+..+.....++.+...... +
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~---~----- 100 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ---S----- 100 (406)
T ss_pred hhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc---c-----
Confidence 344444566677888887765 566778888899999999999999999999888877777766653321 1
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (350)
.+.......+.+.+.+. ..+...+.+.|.+|++.|.++.++......++..++|.+.+.+.+. ++...+++.+++
T Consensus 101 ---~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~ 176 (406)
T PRK15402 101 ---IEQFTLLRFLQGIGLCF-IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAAL 176 (406)
T ss_pred ---HHHHHHHHHHHHhHhhh-HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 22223333333322222 2344457888999999999999998888889999999999988776 445556555655
Q ss_pred hHHHhhheeeecccCC
Q 018767 321 SVITVLFVAKFVPETK 336 (350)
Q Consensus 321 ~~~~~~~~~~~~~~~~ 336 (350)
..+..+..+...||++
T Consensus 177 ~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 177 AALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHhCCCCC
Confidence 5555544444556654
No 147
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.45 E-value=4e-12 Score=108.64 Aligned_cols=159 Identities=17% Similarity=0.083 Sum_probs=107.9
Q ss_pred chhhhhhHHHHHHHhCCCCch-------HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcc
Q 018767 164 INGIGFYTSETFVQAGLSSGK-------LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKG 236 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
......+.|.+.++.+.+..+ .......+...++.++.|+++||+|||+.+..+.....++...+.... +
T Consensus 30 ~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---~ 106 (408)
T PRK09874 30 FSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQ---N 106 (408)
T ss_pred HHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHh---h
Confidence 445556777777888777543 345566677888999999999999999999888777777666553321 1
Q ss_pred cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhh
Q 018767 237 QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFF 315 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~ 315 (350)
.+...+...+.+.+ . +..+....++.|.+|+++|+.+.++.+....+|..++|.+.+.+.+. ++...+.
T Consensus 107 --------~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 176 (408)
T PRK09874 107 --------IWQFLILRALLGLL-G-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFF 176 (408)
T ss_pred --------HHHHHHHHHHHHHh-h-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 22233333333322 2 22344447788899999999999999999999999999999988775 4444555
Q ss_pred HHHHhhHHHhhheeeecccC
Q 018767 316 IYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~ 335 (350)
+.+++..+..+...++.+|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 177 ITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 55555555544444455553
No 148
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.45 E-value=1e-12 Score=112.12 Aligned_cols=145 Identities=17% Similarity=0.151 Sum_probs=99.8
Q ss_pred chhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhccc-CCceeehhhhHHHHHHHHHHHHHHHhccccc
Q 018767 164 INGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKS-GRRPLIMISAAGTFLGCFLAGTSFFLKGQNM 239 (350)
Q Consensus 164 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
++.+..++|.++. +.+.+..+ ...........++.+++|+++||+ |||+.+.++.++..++.+++.... . .
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~---~-~- 99 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE---I-H- 99 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh---c-c-
Confidence 5556666676654 46777665 556666777788999999999999 999999999888888876553211 0 0
Q ss_pred ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcc--hhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhH
Q 018767 240 FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPIN--IKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFI 316 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~ 316 (350)
.............+.+...+.. .+++.|.+|++ .|.++.++.+...++|+.++|.+.+++.+. +++..|.+
T Consensus 100 -----~~~~~l~l~li~iG~G~~~~~~-~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~i 173 (493)
T PRK15462 100 -----PSFLYLSLAIIVCGYGLFKSNV-SCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGL 173 (493)
T ss_pred -----hhHHHHHHHHHHHhcccccccH-HHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHH
Confidence 1112222222222333323334 48899999986 689999999999999999999999999876 44455555
Q ss_pred HHH
Q 018767 317 YSA 319 (350)
Q Consensus 317 ~~~ 319 (350)
.++
T Consensus 174 aai 176 (493)
T PRK15462 174 AAV 176 (493)
T ss_pred HHH
Confidence 433
No 149
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.44 E-value=2.9e-12 Score=107.89 Aligned_cols=135 Identities=18% Similarity=0.123 Sum_probs=98.8
Q ss_pred hhcchhhhhhHHH-HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccc
Q 018767 161 FVGINGIGFYTSE-TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQ 237 (350)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
+........+.|. +.++.+.+..+ +......++..++.++.|+++||+|||+.+..+.++..++.+.+..... +
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~--~- 90 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ--S- 90 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh--h-
Confidence 3334556677774 66788888776 7777888999999999999999999999999998888888777654320 1
Q ss_pred ccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 238 NMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
.+.......+.+.+ .....+. ..++.|.+|+++|+.+.++......+|..+++.+.+.+.+
T Consensus 91 -------~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 91 -------YSVLLLLRLFIGIA-GGSFASC-MPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred -------HHHHHHHHHHHHHh-chhhHhH-HHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 23333333333333 2233333 4889999999999999999998888888888887776654
No 150
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.44 E-value=4e-12 Score=107.31 Aligned_cols=151 Identities=15% Similarity=0.045 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFL 223 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~ 223 (350)
++.+....+.+...+...+......+.+.+ +++++..+ ....+..+...++.+..|++.||+|.|+++.++.++..+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 344544444554444444444444555544 68888877 666777788888888999999999999999988888877
Q ss_pred HHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhH
Q 018767 224 GCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 303 (350)
..+..+.......++ ....++...+.+.+ +..+.+ ....+++.+|+++||++.|+....+++|..+++.+.+
T Consensus 113 ~~~~~~~a~~~~~~s------~~~lli~r~l~Gig-g~~f~~-~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 113 PCVWLGIAVQNPNTP------FGIFIVIALLCGFA-GANFAS-SMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHcccCCC------HHHHHHHHHHHHHH-HHhHHH-HHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 777665431111111 23333333333333 344434 4488999999999999999998777777776666665
Q ss_pred HH
Q 018767 304 FL 305 (350)
Q Consensus 304 ~l 305 (350)
.+
T Consensus 185 ~~ 186 (462)
T PRK15034 185 LV 186 (462)
T ss_pred HH
Confidence 43
No 151
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=9.4e-13 Score=114.21 Aligned_cols=178 Identities=11% Similarity=0.024 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHH
Q 018767 149 VIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCF 226 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 226 (350)
.+...++.+...+..-..+....|.+.++++.+..+ +......++..++.++.|+++||+|||+++..+.++..+..+
T Consensus 30 i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 109 (467)
T PRK09556 30 SYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICML 109 (467)
T ss_pred HHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHH
Confidence 333344444433333344555677888888888766 667778888899999999999999999999888877777766
Q ss_pred HHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 227 LAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
.++.......++ ....++...+.+.+.+...... ..++.|.+|+++|+++.|+......+|..+++.+...+.
T Consensus 110 ~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 110 GFGASLGSGSVS------LGLMIALWALSGFFQSTGGPCS-YSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHhcccch------HHHHHHHHHHHHHHHhccchHH-HHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 665432211111 2334444444444445444444 489999999999999999999999999999988877665
Q ss_pred hhh----ccchhhHHHHhhHHHhhheeeecc
Q 018767 307 SWS----SSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 307 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
+.. +...+.+.+++.++.+++.+++.+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~ 213 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGS 213 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCC
Confidence 531 223344445555444444444433
No 152
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.43 E-value=1.9e-14 Score=124.54 Aligned_cols=297 Identities=15% Similarity=0.139 Sum_probs=3.0
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc--------------------
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-------------------- 62 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-------------------- 62 (350)
+..++++.++.|+|....++.+.+|+-|..++++-+.+.|+..+...+|+++|.++++..
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~ 220 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPS 220 (539)
T ss_dssp -----------SSS------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCC
Confidence 467889999999999999999999999999999999999999999999999999888754
Q ss_pred --h----hhHHHhhchHHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHH-HHHHhccCCCcc
Q 018767 63 --P----WRILALTGLVPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQ-VYILTLRSLPKA 135 (350)
Q Consensus 63 --~----Wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 135 (350)
. |-.-|++.+...++..+..++.|+..+-.. +..++.+...++ .++.+.++..++.+ .......++-..
T Consensus 221 dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~df~~ 296 (539)
T PF03137_consen 221 DPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTS--ERQEEKESSERK--EEDSDKDSFKDPKSKKSFGKSIKDFPK 296 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcc--cccchhhhhhcc--hhhhhhhcccccccccchhhhhhhHHH
Confidence 1 444455555555554444555554321110 000000000000 00000000000000 000011122233
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch---HHHHHHHHHhhhHHhhHhhhhcccC--
Q 018767 136 SIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK---LGTILYACVQVPITVVGAFLMDKSG-- 209 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g-- 209 (350)
..+++++|+ .++...+...........+..+.|.+++ +++.+.+. ....+...+..+|.+++|++.+|++
T Consensus 297 ~l~~Ll~Np----~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 297 ALKRLLTNP----VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 455556644 3344444444444456677778887765 56666554 3334444567789999999999974
Q ss_pred CceeehhhhHHHHHHHHHHHHHHHh-----------ccc-------c--c--------------------c-cC-c-hhH
Q 018767 210 RRPLIMISAAGTFLGCFLAGTSFFL-----------KGQ-------N--M--------------------F-LD-W-VPV 246 (350)
Q Consensus 210 rr~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-------~--~--------------------~-~~-~-~~~ 246 (350)
.|..+....+...+..+........ .+. . . - .+ . ...
T Consensus 373 ~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~ 452 (539)
T PF03137_consen 373 ARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLI 452 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccH
Confidence 4444444443333333321110000 000 0 0 0 00 0 011
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHH-HHHHHHHHHHhHHHHhh
Q 018767 247 LAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVN-WSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~~~~~~~l~~~ 308 (350)
..++...+..........|.. ......+|+++|+.|.|+...+. .+|.+-+|.+.|.+.|.
T Consensus 453 ~Fl~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 453 PFLILLFILSFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 222222333333444444554 66778899999999999998774 55778899999999886
No 153
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.42 E-value=3.9e-12 Score=107.68 Aligned_cols=151 Identities=10% Similarity=0.088 Sum_probs=103.4
Q ss_pred hhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhH
Q 018767 169 FYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPV 246 (350)
Q Consensus 169 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (350)
...+...++.+.+... +......+...+..++.|+++||+|||+++..+..+..++.+.+.... ..
T Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~------------~~ 91 (393)
T PRK11195 24 FAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI------------HP 91 (393)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH------------HH
Confidence 3334455666666544 666777888899999999999999999999999888877766543321 11
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhHHHhh
Q 018767 247 LAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (350)
.....+.+ .......|...+++.|.+|+++|+++.|+.+....++..+||.++|.+.+..+...+.+.+.... .+.
T Consensus 92 --~~~r~l~G-~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~-~~~ 167 (393)
T PRK11195 92 --LLAYGLVG-IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYL-LAA 167 (393)
T ss_pred --HHHHHHHH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 22222333 33334445555999999999999999999999999999999999999988653333333332222 223
Q ss_pred heeeecccC
Q 018767 327 FVAKFVPET 335 (350)
Q Consensus 327 ~~~~~~~~~ 335 (350)
+....+||.
T Consensus 168 ~~~~~l~~~ 176 (393)
T PRK11195 168 LFNLFIPRL 176 (393)
T ss_pred HHHhcCCCC
Confidence 333455554
No 154
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.42 E-value=1.5e-12 Score=110.11 Aligned_cols=158 Identities=17% Similarity=0.118 Sum_probs=113.7
Q ss_pred hhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCc
Q 018767 166 GIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDW 243 (350)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (350)
......|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+.++..++...+.... +
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~---~------- 78 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ---T------- 78 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc---c-------
Confidence 3345667777888888766 667778888999999999999999999999998888888777764431 1
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhH
Q 018767 244 VPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSV 322 (350)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 322 (350)
.+.......+.+.+.+... +...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+. ++...+.+.+.+..
T Consensus 79 -~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 156 (377)
T PRK11102 79 -IDQLIYMRFLHGLAAAAAS-VVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAI 156 (377)
T ss_pred -HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 2333333334343333333 33348899999999999999999999999999999999988876 44455555565555
Q ss_pred HHhhheeeecccC
Q 018767 323 ITVLFVAKFVPET 335 (350)
Q Consensus 323 ~~~~~~~~~~~~~ 335 (350)
+..+...++.+|+
T Consensus 157 ~~~~~~~~~~~~~ 169 (377)
T PRK11102 157 LAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHhCCcc
Confidence 5555444555654
No 155
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.42 E-value=7.6e-12 Score=106.56 Aligned_cols=145 Identities=14% Similarity=-0.060 Sum_probs=99.4
Q ss_pred chhhhhhHHH-HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccc
Q 018767 164 INGIGFYTSE-TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 164 ~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
........|. +.++.+.+..+ .......++..+++++.|+++||+|||+++..+.++..++...+.......+..
T Consensus 31 ~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~-- 108 (399)
T PRK05122 31 IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWP-- 108 (399)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccc--
Confidence 3444555565 44667877766 777788889999999999999999999999998887777655554332221100
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccc
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSG 312 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 312 (350)
.+.....+....+.+.+.+...... ..+..|.+|+++|+++.++......+|..+++.+.+.+.+..++.
T Consensus 109 -~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~ 178 (399)
T PRK05122 109 -VLSLLLLLLGRLLLGIGESLAGTGS-ILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLA 178 (399)
T ss_pred -hhHHHHHHHHHHHHHhhHHhhcchH-HHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHH
Confidence 0001223333334444444333333 377889999999999999999889999999999999887764333
No 156
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.41 E-value=9.9e-12 Score=108.55 Aligned_cols=150 Identities=18% Similarity=0.054 Sum_probs=96.2
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHH-HHHHHHHHHHHHhhcc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVL-AVGGILIYIAFFSIGF 263 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 263 (350)
+......++.++++++.|+++||+|||+++..+..+..++.+..+.............+.... .+..-.+.+.+.+...
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 677788899999999999999999999999999888877766654321100000000000122 2333334444444433
Q ss_pred cchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh---------hhccchhhHHHHhhHHHhhheeeeccc
Q 018767 264 GAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS---------WSSSGTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 264 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
+...+++.|.+|+++|+.+.++.+....+|..+++.+.+.+.. .++...+.+.++..++. .+..+++||
T Consensus 139 -~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~l~~ 216 (479)
T PRK10077 139 -MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLF-LMLLYFVPE 216 (479)
T ss_pred -hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHH-HHHHHcCCC
Confidence 4444899999999999999999999999999888777654431 13344455444444443 333456677
Q ss_pred CC
Q 018767 335 TK 336 (350)
Q Consensus 335 ~~ 336 (350)
+.
T Consensus 217 s~ 218 (479)
T PRK10077 217 TP 218 (479)
T ss_pred Cc
Confidence 54
No 157
>PRK11043 putative transporter; Provisional
Probab=99.41 E-value=7.8e-12 Score=106.53 Aligned_cols=147 Identities=10% Similarity=0.005 Sum_probs=101.5
Q ss_pred hHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHH
Q 018767 170 YTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVL 247 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (350)
..|.+.++.+.+..+ .......++..+++++.|+++||+|||+.+..+..+..++.+..... ++ .+.
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~~--------~~~ 96 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV---ES--------AAQ 96 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh---cC--------HHH
Confidence 344566778887766 66777888889999999999999999999988877777666655332 11 222
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHHhh
Q 018767 248 AVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 326 (350)
.+....+.+.+.+... +...+.+.|.+|++.++...+..+....++..++|.+.+.+.+. ++...+.+.+....+..+
T Consensus 97 l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 175 (401)
T PRK11043 97 LLVLRFVQAVGVCSAA-VIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL 175 (401)
T ss_pred HHHHHHHHHhhhHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 3333333333322222 23337788999999889999998888999999999999998876 444455555555554444
Q ss_pred he
Q 018767 327 FV 328 (350)
Q Consensus 327 ~~ 328 (350)
..
T Consensus 176 ~~ 177 (401)
T PRK11043 176 PT 177 (401)
T ss_pred HH
Confidence 33
No 158
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=1.2e-12 Score=110.65 Aligned_cols=157 Identities=15% Similarity=0.110 Sum_probs=108.4
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
.+......|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+..+..++.+.......
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~-------- 90 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS-------- 90 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH--------
Confidence 345566788888888888776 7778888999999999999999999999999998888888777654432
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (350)
.+.......+.+.+.+....... ....|.+| ++|+++.+.......+|..+++.+.+.+.+. ++...+.+.++.
T Consensus 91 ---~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASAGVGIAYGIAL-NTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhHHHHHHHHhHH-HHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 23333333333333333333333 56677777 4699999999999889988766666665554 444556666665
Q ss_pred hHHHhhheeeecc
Q 018767 321 SVITVLFVAKFVP 333 (350)
Q Consensus 321 ~~~~~~~~~~~~~ 333 (350)
..+..+..+++.+
T Consensus 166 ~~~~~~~~~~~~~ 178 (377)
T TIGR00890 166 FLLVIVLGAFLIG 178 (377)
T ss_pred HHHHHHHHHHhee
Confidence 5555544444443
No 159
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.41 E-value=3.2e-12 Score=108.76 Aligned_cols=134 Identities=14% Similarity=-0.084 Sum_probs=92.6
Q ss_pred hhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCch
Q 018767 167 IGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWV 244 (350)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
...+.+.+.++.+.+..+ .......++..++.++.|++.||+|||+.+..+..+..++.+.......... +
T Consensus 32 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~-~------ 104 (402)
T TIGR00897 32 EQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHA-N------ 104 (402)
T ss_pred HHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc-c------
Confidence 344556666888888766 7777888999999999999999999999999888887777554422111111 1
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHH-HHHHHHhHHHHhh
Q 018767 245 PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGA-WAVSYTFNFLMSW 308 (350)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~ 308 (350)
.+..+....+.+.+.+...... ...+.+.+|+++|+++.|+.+....+|. .++|.+.+.+.+.
T Consensus 105 ~~~l~~~~~i~G~g~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 105 YPLILLFYGIRGLGYPLFAYSF-LVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHHHHHHHHcchHHHHhHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 2222333333333332222223 3667788999999999999999999986 5788888877664
No 160
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.41 E-value=2.2e-12 Score=107.80 Aligned_cols=160 Identities=11% Similarity=-0.013 Sum_probs=109.5
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
...+....|.+.++++.+..+ +......++..++.+..|+++||+|||+++.........+.... ...++
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~---~~~~~----- 78 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL---LDPFN----- 78 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH---HHhcc-----
Confidence 345566778888889888776 66667788889999999999999999987654433333322111 11011
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (350)
....+....+.+.+.+. ..+. .....|.+|+++|+++.++.+....+|..+++.+.+.+.+. ++...+.+.+++
T Consensus 79 ---~~~l~~~R~l~G~g~~~-~~~~-~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l 153 (368)
T TIGR00903 79 ---YEWLLACQLLAALGQPF-LLNA-FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAV 153 (368)
T ss_pred ---HHHHHHHHHHHHhHhHH-HHHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 23334444444433332 2223 36668999999999999999999999999999999988876 445556666777
Q ss_pred hHHHhhheeeecccCC
Q 018767 321 SVITVLFVAKFVPETK 336 (350)
Q Consensus 321 ~~~~~~~~~~~~~~~~ 336 (350)
..+..++.++++||++
T Consensus 154 ~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 154 AAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHcCCCC
Confidence 6666666666777754
No 161
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.39 E-value=2.5e-12 Score=111.20 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=103.9
Q ss_pred hcchhhhhhHHHHHHH---hCCCCch--HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhhHHHHHHHHHHHHHHHhc
Q 018767 162 VGINGIGFYTSETFVQ---AGLSSGK--LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISAAGTFLGCFLAGTSFFLK 235 (350)
Q Consensus 162 ~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
.+++....++|.++++ .|.+..+ .......++..++.+++|+++|| +|||+.+..+.++..++.++++...
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~--- 100 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI--- 100 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc---
Confidence 3355566667766654 5777655 66777888899999999999999 8999999999998888877764421
Q ss_pred ccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcch---hhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hcc
Q 018767 236 GQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINI---KGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSS 311 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~ 311 (350)
+ .+.......+.+.+.+....+. .+++.|.+|++. |+++.++.+...++|+.++|.+.+.+.+. ++.
T Consensus 101 ~--------~~~~~~~~~l~g~g~g~~~~~~-~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~ 171 (475)
T TIGR00924 101 Y--------PDLIFYGLGTIAVGSGLFKANP-SSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYH 171 (475)
T ss_pred c--------HhHHHHHHHHHHhccccccCCH-HHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 1 1223333333333333333344 488889998754 88899999999999999999999999886 544
Q ss_pred chhhHHHH
Q 018767 312 GTFFIYSA 319 (350)
Q Consensus 312 ~~~~~~~~ 319 (350)
..+...++
T Consensus 172 ~~f~~~~~ 179 (475)
T TIGR00924 172 VGFNLAAV 179 (475)
T ss_pred HHHHHHHH
Confidence 55555443
No 162
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=2.9e-12 Score=111.95 Aligned_cols=141 Identities=19% Similarity=0.139 Sum_probs=96.8
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.......++..++.++.|+++||+|||+.+..+..+..++.++........+ .+..+....+.+.+.+...
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~r~l~G~~~~~~~- 145 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALS--------VEMLIVGRVLLGIGVGIAS- 145 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccc--------hHHHHHHHHHHHhhhhHHH-
Confidence 7777888999999999999999999999999888888777777643321110 1233444444444444433
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh---HHHHhh-hccchhhHHHHhhHHHhhheeeecccC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF---NFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~---~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+....++.|.+|+++|+.+.++.+....+|..+++.+. +...+. ++...+.+ .++..+..++..++++|+
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~-~~~~~~~~~~~~~~l~~~ 219 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL-QLIPAGLLFLGLFFLPES 219 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH-HHHHHHHHHHHHhcCCCC
Confidence 34458999999999999999999999999999999998 443333 33334444 333344444444556664
No 163
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.39 E-value=4.1e-12 Score=103.41 Aligned_cols=264 Identities=14% Similarity=0.102 Sum_probs=159.2
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----------hhhH--HHhhch
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----------PWRI--LALTGL 72 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----------~Wr~--~f~~~~ 72 (350)
....+..+.+.++-........+..-|++++||..+..+-.++..+|.+++.++...+ .|.. .|+...
T Consensus 142 l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~ 221 (480)
T KOG2563|consen 142 LTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVE 221 (480)
T ss_pred hhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHH
Confidence 4556777777777766666677888899999999999999999889988888887766 3654 354333
Q ss_pred HHHHHHH-HHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHH
Q 018767 73 VPCVLLL-VGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVII 151 (350)
Q Consensus 73 ~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (350)
..+.+.+ +..+..+|.|+......+ . ..++.+-..+.++.++++++....+
T Consensus 222 ~l~~l~l~l~~~~~~~~P~tPps~s~--------------------~--------~~~~~~f~~si~~~~~n~~F~il~~ 273 (480)
T KOG2563|consen 222 CLAALLLALVLFVFTKKPPTPPSASQ--------------------A--------ALQDASFPKSIKSCFKNRQFIILAI 273 (480)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCchhH--------------------h--------hhhcCcHHHHHHHHHcCccHHHHHH
Confidence 3333322 222333333321000000 0 0001223456778888766443333
Q ss_pred HHHHHHHHHhhcchhhhhhHHHHHHHhCCCC--chHHHHHHHHHhhhHHhhHhhhhcccCCce-eehhhhHHHHHHHHHH
Q 018767 152 GVSLMVLQQFVGINGIGFYTSETFVQAGLSS--GKLGTILYACVQVPITVVGAFLMDKSGRRP-LIMISAAGTFLGCFLA 228 (350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~grr~-~~~~~~~~~~~~~~~~ 228 (350)
+..+. ...++.....+...+...+++. .........+++++++.+.|.+.||.+.-+ ...+......++...+
T Consensus 274 ~ygi~----~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l 349 (480)
T KOG2563|consen 274 CYGIG----LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLML 349 (480)
T ss_pred HHhhh----HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 33322 2223444444433334445553 227778888899999999999999987543 3444344433332222
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.. ...... ....+.......++++.+..|+..-+..|..-|..-++..|+.+..+++-+++-..+.+...+.
T Consensus 350 ~~-~t~~~~-------~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~ 421 (480)
T KOG2563|consen 350 LT-CTLFLG-------DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAED 421 (480)
T ss_pred HH-hhccCC-------ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhc
Confidence 11 111111 1222333444455667777788878888876556678899999999999998888888887765
No 164
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.39 E-value=8.1e-12 Score=108.14 Aligned_cols=158 Identities=16% Similarity=0.130 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHH-HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhhHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSE-TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISAAGTF 222 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~~~~~ 222 (350)
+.....+.......+. ++....+++. +.++.+.+... ...........+..+++|+++|| +|||+.+..+.++..
T Consensus 14 ~~~~~~~~~~~~er~~-~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 14 RPFFMIFFVELWERFG-YYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 4444444444444443 4444444444 44567777655 44445555566667799999999 999999999999999
Q ss_pred HHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcch--hhhHhHHHHHHHHHHHHHHHH
Q 018767 223 LGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINI--KGVAGSLVVLVNWSGAWAVSY 300 (350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~~~ 300 (350)
++.+.+...... .........+.+.+.+...+.. .+++.|.+|++. |+.+.++.+...++|..++|.
T Consensus 93 ~g~~~~~~~~~~----------~~ll~~~~~l~~ig~g~~~~~~-~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 93 IGYFMTGMSLLK----------PDLIFIALGTIAVGNGLFKANP-ASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHHhccc----------hhHHHHHHHHHHhccccccCCH-HHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 988887543210 1222233333333333333344 489999998874 578899999999999999999
Q ss_pred HhHHHHhh-hccchhhH
Q 018767 301 TFNFLMSW-SSSGTFFI 316 (350)
Q Consensus 301 ~~~~l~~~-~~~~~~~~ 316 (350)
+.+++.++ +++..|++
T Consensus 162 l~g~l~~~~gw~~~F~i 178 (489)
T PRK10207 162 LAPVIADKFGYSVTYNL 178 (489)
T ss_pred HHHHHHHhhChHHHHHH
Confidence 99999887 44444544
No 165
>PRK12382 putative transporter; Provisional
Probab=99.38 E-value=7.9e-12 Score=106.19 Aligned_cols=144 Identities=13% Similarity=-0.126 Sum_probs=96.1
Q ss_pred hhhhhhHHH-HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 165 NGIGFYTSE-TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 165 ~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
.......|. +.++.|.+..+ .......+...+++++.|+++||+|||+.+..+.+...++.+.............
T Consensus 32 ~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 109 (392)
T PRK12382 32 GLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAP-- 109 (392)
T ss_pred HHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchh--
Confidence 333444554 44678888776 7777888899999999999999999999998887766655443322211110000
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccc
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSG 312 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 312 (350)
...+..++...+.+.+.+... +...+++.|..|+++|+++.+........|..++|.+.+.+.+..++.
T Consensus 110 -~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 178 (392)
T PRK12382 110 -FKFALLVVGRLILGFGESQLL-TGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFA 178 (392)
T ss_pred -HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 001223333333343333333 333377889999999999999999999999999999999887764333
No 166
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.38 E-value=1.3e-11 Score=104.89 Aligned_cols=133 Identities=15% Similarity=-0.004 Sum_probs=102.5
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.......|.+.++++.+..+ .......++..++++..|++.||+|||+.+..+..+..++..++......++
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~------ 93 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMN------ 93 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcc------
Confidence 44456678888888888766 7778888999999999999999999999999999998888777533321111
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
.+..+....+.+.+.+....+.. .++.+..|+++|++..++.+....+|..++|.+.+.+.
T Consensus 94 --~~~~l~~~~l~G~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 94 --YTLFLVGLFILTAGLGFLETAAN-PYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred --HHHHHHHHHHHHhhHHHHHhhhh-HHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344444455555555555555 78888889999999999999999999999999988774
No 167
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.38 E-value=4.5e-12 Score=110.12 Aligned_cols=147 Identities=13% Similarity=-0.049 Sum_probs=102.4
Q ss_pred hCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHH
Q 018767 178 AGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIY 255 (350)
Q Consensus 178 ~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (350)
.+.+..+ .......++..++.++.|++.||+|||+.+..+.++..++.++...... .. ....++...+.
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-~~--------~~~l~~~r~~~ 141 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-GG--------IALVVFCRVIQ 141 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-cC--------chHHHHHHHHH
Confidence 3444433 5677788899999999999999999999999888877777665533211 00 12233333333
Q ss_pred HHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh--hccchhhHHHHhhHHHhhheeeecc
Q 018767 256 IAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW--SSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 256 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
+.+.+ ...+....++.|.+|++.|+++.++.+....+|..++|.+.+.+.+. ++...+.+.++..++..++.+.+.+
T Consensus 142 G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 142 GLAQG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred HHhcc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 33333 33444458999999999999999999999999999999999998876 4455666666665555554444444
Q ss_pred c
Q 018767 334 E 334 (350)
Q Consensus 334 ~ 334 (350)
+
T Consensus 221 ~ 221 (465)
T TIGR00894 221 D 221 (465)
T ss_pred C
Confidence 4
No 168
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.37 E-value=1e-11 Score=105.04 Aligned_cols=143 Identities=10% Similarity=-0.025 Sum_probs=104.3
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
.+..+.............|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+..+..++.......
T Consensus 12 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~ 91 (381)
T PRK03633 12 LCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM 91 (381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333334444566777888888888887665 77788888999999999999999999999999888888777665432
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
. + .+..++...+.+.+.+... +.....+.+..|+++|+++.+..+....+|..++|.+.+.+.+.
T Consensus 92 ~---~--------~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 92 V---G--------FWSWLAWRFVAGIGCAMIW-VVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred c---c--------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 1 1 2333444334343333322 33225566788888999999999999999999999999987664
No 169
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.36 E-value=1e-11 Score=107.20 Aligned_cols=167 Identities=13% Similarity=0.079 Sum_probs=109.2
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
|..+..+++.....+.....+..+.+.+.++.+.+..+ .......+...++.++.|+++||+|||+.++.+..+..++
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 97 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLG 97 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHH
Confidence 33444444443333332344566778888888888766 5555566667788899999999999999998888777777
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHH-HHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGI-LIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 303 (350)
.+..+.... .+...... .+.+.+.+....+. ..++.+.+| +.|+++.++.+....+|..++|.+.+
T Consensus 98 ~~~~~~~~~-----------~~~l~~~~~~l~G~~~~~~~~~~-~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~ 164 (455)
T TIGR00892 98 MILASFSSN-----------VIELYLTAGFITGLGLAFNFQPS-LTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQ 164 (455)
T ss_pred HHHHHHhhh-----------HHHHHHHHHHHHHhcchhhhhHH-HHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHH
Confidence 666544321 12222222 22233333322333 366778886 67999999999999999999999999
Q ss_pred HHHhh-hccchhhHHHHhhHHHhh
Q 018767 304 FLMSW-SSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 304 ~l~~~-~~~~~~~~~~~~~~~~~~ 326 (350)
.+.+. ++...+.+.+++.++..+
T Consensus 165 ~l~~~~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 165 YLFESFGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHH
Confidence 88776 555566666665554433
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.36 E-value=2.5e-11 Score=106.28 Aligned_cols=145 Identities=14% Similarity=0.005 Sum_probs=99.2
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.......++.+++.++.|+++||+|||+.+..+.++..++.++.+...... + .......++...+.+.+.+....
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~--~---~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS--P---KSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc--c---chHHHHHHHHHHHHHHHHhhhhH
Confidence 567778888999999999999999999999988888888776654431100 0 00012334444444444444444
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-----------------------hccchhhHHHHhh
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-----------------------SSSGTFFIYSAFS 321 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~ 321 (350)
+. ..++.|.+|++.|+++.++.+....+|..+++.+...+... .+|...+...++.
T Consensus 135 ~~-~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip 213 (502)
T TIGR00887 135 LS-AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVP 213 (502)
T ss_pred HH-HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHH
Confidence 44 49999999999999999999999999999998887654321 1233334445545
Q ss_pred HHHhhheeeecccC
Q 018767 322 VITVLFVAKFVPET 335 (350)
Q Consensus 322 ~~~~~~~~~~~~~~ 335 (350)
.+...+..+++||+
T Consensus 214 ~~i~~~~~~~lpES 227 (502)
T TIGR00887 214 ALLALYFRLTIPET 227 (502)
T ss_pred HHHHHHHHHhCCCC
Confidence 45555555677886
No 171
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.36 E-value=1.2e-10 Score=99.59 Aligned_cols=296 Identities=13% Similarity=-0.030 Sum_probs=143.9
Q ss_pred hhhHhhhhhccccccchhhhhhhcccCcc--chhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHHHHH
Q 018767 7 TLEDFSTGYGIGVFSYVVPIFIAEIAPRN--LRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVLLLV 80 (350)
Q Consensus 7 ~~~R~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~~~ 80 (350)
.+...+.++|.|...+...++++|.+|++ +|....++...+.++|..++|.+.+.+ |||+.|.++++..++.++
T Consensus 104 ~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 104 YLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred HHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Confidence 33444455666777787889999999875 699999999999999999999988876 899999887664444443
Q ss_pred HHhccCCChHHH-HHhCChHHHHHHHHHH------hc------CCcchHHHHHHHHHHHHh-ccCCCc-chhhhhhcccc
Q 018767 81 GLCFVPESPRWL-AKVGLDKEFQVALRKL------RG------KDADITREAAEIQVYILT-LRSLPK-ASIRDLFKSKY 145 (350)
Q Consensus 81 ~~~~~~esp~~~-~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 145 (350)
.+....+..... ..+++..+.++..... -. ......++.......... ....-- .-.+...++..
T Consensus 184 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 263 (493)
T PRK15462 184 IFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQ 263 (493)
T ss_pred HHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 333221110000 0000000000000000 00 000000000000000000 000000 00000011111
Q ss_pred hhHHHHH--HHHHHHHHhhcchhhhhhHHHHHHH------hCCCCch-HHHHHHHHHhhhHHhhHhhhhcccCC--cee-
Q 018767 146 IRSVIIG--VSLMVLQQFVGINGIGFYTSETFVQ------AGLSSGK-LGTILYACVQVPITVVGAFLMDKSGR--RPL- 213 (350)
Q Consensus 146 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~gr--r~~- 213 (350)
+++.... +++.....+..+.-....+..+.++ .|++-+. +...+..+..++.+++.+++-.|..| |..
T Consensus 264 r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s 343 (493)
T PRK15462 264 RKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVR 343 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 2222211 1111111111111111111222221 1222222 66677777777777777777666532 221
Q ss_pred ----ehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHH
Q 018767 214 ----IMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVL 289 (350)
Q Consensus 214 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 289 (350)
..++.++..++.+.+.......+... ..+..+++....+....-....|+..+.++++.|++.||..+|....
T Consensus 344 ~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~---~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l 420 (493)
T PRK15462 344 IWGKFALGLGLMSAGFCILTLSARWSAMYG---HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML 420 (493)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHH
Confidence 45566666776666654333222111 01233344444444555666778888999999999999999999866
Q ss_pred HH-HHHHHHHHHHhHHH
Q 018767 290 VN-WSGAWAVSYTFNFL 305 (350)
Q Consensus 290 ~~-~~g~~~~~~~~~~l 305 (350)
.. .+|..++..+.+..
T Consensus 421 ~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 421 LSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 43 56666666665544
No 172
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.32 E-value=3.3e-11 Score=107.39 Aligned_cols=162 Identities=13% Similarity=0.007 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
+..++...+..+.............+.+.++++++..+ +......++..++.++.+++.||+|||+.+.++.++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 32 KVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH
Confidence 33334344344444433445555666777788888776 6777888899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccc-------------------------------------cC--chhHHHHHHHHHHHHHHhhcccc
Q 018767 225 CFLAGTSFFLKGQNMF-------------------------------------LD--WVPVLAVGGILIYIAFFSIGFGA 265 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~-------------------------------------~~--~~~~~~~~~~~~~~~~~~~~~~~ 265 (350)
.+++++.......... .. ...+..+++.-++.+.......+
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 9998776432110000 00 00122222223333333333345
Q ss_pred hhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 266 VPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 266 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
...+++.|.+|++.|+...++.+....+|..+++.+++.+.+.
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 5559999999999999999999999999999999999987753
No 173
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.31 E-value=5.6e-11 Score=102.15 Aligned_cols=145 Identities=14% Similarity=0.004 Sum_probs=90.5
Q ss_pred HHHHhhcchhhhhhHHHHHHHhC---CCCch-----HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 157 VLQQFVGINGIGFYTSETFVQAG---LSSGK-----LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
..........+....|.+.++.+ .+..+ .......++..+++++.|+++||+|||+.+..+..+..++.+..
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 33333334455666676767664 22222 22333445556899999999999999999999999888888776
Q ss_pred HHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 229 GTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
++........ .+.....+..-.+.+.+.+.. .+...+++.|.+|+++|+.+.++.+.....|..+++.+...+
T Consensus 111 ~~~~~~~~~~---~~~~~~l~~~R~l~G~g~g~~-~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~ 183 (432)
T PRK10406 111 ACLPGYETIG---TWAPALLLLARLFQGLSVGGE-YGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL 183 (432)
T ss_pred hhcCCchhHH---HHHHHHHHHHHHHHHhhhhhh-HhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432110000 000122333333334333333 344459999999999999999988877777877777665444
No 174
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.31 E-value=2.9e-11 Score=101.10 Aligned_cols=147 Identities=17% Similarity=0.097 Sum_probs=108.0
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
........|.+.++.+.+..+ .......++..++.++.|+++||+|||+.+..+.....++.+..... ++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~---~~----- 86 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA---SS----- 86 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh---cc-----
Confidence 455566677777777777665 67777888899999999999999999999998888888887776543 11
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh-ccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS-SSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~ 320 (350)
.+.......+.+.+.+... +...++..|.+|+++|++..+..+....+|..++|.+.+.+.+.. +...+.+.+..
T Consensus 87 ---~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (352)
T cd06174 87 ---LWLLLVGRFLLGLGGGALY-PAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAIL 162 (352)
T ss_pred ---HHHHHHHHHHHHccccccc-HhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2333343444443334333 444489999999999999999999999999999999999988764 33344444433
Q ss_pred hH
Q 018767 321 SV 322 (350)
Q Consensus 321 ~~ 322 (350)
..
T Consensus 163 ~~ 164 (352)
T cd06174 163 GL 164 (352)
T ss_pred HH
Confidence 33
No 175
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.31 E-value=4.1e-11 Score=101.61 Aligned_cols=132 Identities=15% Similarity=0.110 Sum_probs=103.4
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
........|.+.++++.+..+ +......++..++.++.|++.||+|||+++..+..+..++.+..+....
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~-------- 96 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ-------- 96 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc--------
Confidence 355667788888999988877 7777778889999999999999999999999999999999888755421
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.+..+....+.+.+.+....... .++.|.+| ++|+.+.+........|..+++.+.+.+.++
T Consensus 97 ---~~~ll~~r~l~Gig~~~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 97 ---SALLLSSALLGGVGIGIIQAVMP-SVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred ---hHHHHHHHHHHHhHHHHHhhhhh-HHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23344444444555554444444 77888887 6799999999999999999999999888775
No 176
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.30 E-value=3.1e-11 Score=104.35 Aligned_cols=149 Identities=14% Similarity=0.141 Sum_probs=103.2
Q ss_pred hhhhhHHHHHHHhCCCCch-HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCch
Q 018767 166 GIGFYTSETFVQAGLSSGK-LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWV 244 (350)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
.....++.+..+.|-++.. +......++..++.++.|+++|.+|||..++.+.++..++.++.+....
T Consensus 62 ~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~----------- 130 (599)
T PF06609_consen 62 LPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQN----------- 130 (599)
T ss_pred ccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCc-----------
Confidence 3344556777888887766 7777788889999999999999999999999999999999988754432
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHH
Q 018767 245 PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVI 323 (350)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 323 (350)
....+.+..+.+.+.+. ..+....++|..|.+.|..+.++...........+|.+...+..+ ++.+.+++..+...+
T Consensus 131 ~~~~iag~~l~GvgaG~--~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i 208 (599)
T PF06609_consen 131 MNTFIAGMVLYGVGAGV--QELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGI 208 (599)
T ss_pred HHHHHHHHHHHHHhhHH--HHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHH
Confidence 23334444444443322 223346689999999998888777665555555677777665544 555666666655555
Q ss_pred Hhhh
Q 018767 324 TVLF 327 (350)
Q Consensus 324 ~~~~ 327 (350)
..+.
T Consensus 209 ~~vl 212 (599)
T PF06609_consen 209 ALVL 212 (599)
T ss_pred HHHH
Confidence 4433
No 177
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.30 E-value=8.3e-11 Score=102.68 Aligned_cols=178 Identities=16% Similarity=0.098 Sum_probs=105.5
Q ss_pred HHHHHHHHhhcchhhhhhHHHHHHHhCCCCch---HH-----HHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 153 VSLMVLQQFVGINGIGFYTSETFVQAGLSSGK---LG-----TILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
..+..+....-+..+.+..|.+.++...+.+. .. .....++..+|+++.|+++||+|||+++..+.+++.++
T Consensus 21 ~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~ 100 (490)
T PRK10642 21 ASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSIS 100 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 33333333333444555566665555433221 11 24445677889999999999999999999999999998
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.++.++......-. .+.+...+..-.+.+.+.+....+. .+++.|.+|+++|+...++......+|..+++.+...
T Consensus 101 ~~~~a~~~~~~~~g---~~a~~~l~~~R~l~G~g~g~~~~~~-~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 101 TFCIGLIPSYATIG---IWAPILLLLCKMAQGFSVGGEYTGA-SIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHHhcccHHHHH---HHHHHHHHHHHHHHHhHhHhhHHHH-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88876543211000 0000113333334444444444444 4899999999999999999888888888777766544
Q ss_pred HHh---------hhccchhhHHHHhhHHHhhheeeecccC
Q 018767 305 LMS---------WSSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 305 l~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+.. .++...|++.+ ...+.+++.....||+
T Consensus 177 ~~~~~~~~~~~~~gWR~~f~i~~-~~~l~~~~~~~~~~es 215 (490)
T PRK10642 177 ISTIVGEANFLDWGWRIPFFIAL-PLGIIGLYLRHALEET 215 (490)
T ss_pred HHHhcCHHHhcCccHHHHHHHHH-HHHHHHHHHHHcCCCC
Confidence 322 23444454433 3333333333456665
No 178
>PTZ00207 hypothetical protein; Provisional
Probab=99.30 E-value=1.1e-10 Score=101.65 Aligned_cols=164 Identities=15% Similarity=0.101 Sum_probs=103.9
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
.+.+..+.+.+.++++.+..+ ...... .....+.++.|++.||+|+|+++.++.++..++.++.++.....-..
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~--- 118 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEG--- 118 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccC---
Confidence 456667788888889988776 222222 22234556789999999999999999999999988876642210000
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFS 321 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (350)
..+...+...+.+.+.+....... ..+.+.+| ++||.+.|+......+|+.+.+.+...+...+....+++.+++.
T Consensus 119 --s~~~l~l~r~l~G~G~~~~~~~~~-~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~ 194 (591)
T PTZ00207 119 --SVVRLSVYNGLMTLGCMLFDLGAV-VTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFA 194 (591)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 023333333333333332223333 66778887 67999999999999999986544444444444445666667766
Q ss_pred HHHhhheeeecccC
Q 018767 322 VITVLFVAKFVPET 335 (350)
Q Consensus 322 ~~~~~~~~~~~~~~ 335 (350)
.+.+++.+.+++..
T Consensus 195 ~vv~ll~~~~vr~p 208 (591)
T PTZ00207 195 LVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHhheeCC
Confidence 66666655555443
No 179
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=2.4e-11 Score=98.41 Aligned_cols=174 Identities=16% Similarity=0.038 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHH
Q 018767 150 IIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFL 227 (350)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 227 (350)
+....+.+...+...+......+.+.+++++++.+ +..++..+.+.+..++.|.+.||+|.|+...++.++..+-++.
T Consensus 16 L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~ 95 (417)
T COG2223 16 LWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLG 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHH
Confidence 33333344433333445555556666889999888 7788888999999999999999999999999999888888887
Q ss_pred HHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 228 AGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
.++....++ .+..+. ..++. +.+.+..++...++++.||++++|.+.|++. .+++|..+...+.+.+..
T Consensus 96 ~~~a~~~~~--------~~~ll~-~gll~-G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~ 164 (417)
T COG2223 96 LAFAVTYPS--------TWQLLV-IGLLL-GLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHccCCc--------hHHHHH-HHHHH-hcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH
Confidence 766544332 122222 22222 2233333444488999999999999999999 999999999888888876
Q ss_pred h-h---ccchhhHHHHhhHHHhhheeeeccc
Q 018767 308 W-S---SSGTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 308 ~-~---~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
. + ++....++....++..+..++..++
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6 3 4455666666666666666665544
No 180
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.30 E-value=2.5e-11 Score=87.12 Aligned_cols=134 Identities=16% Similarity=0.208 Sum_probs=94.0
Q ss_pred HHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhh
Q 018767 189 LYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPW 268 (350)
Q Consensus 189 ~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (350)
...++.+++.++.|++.||+|||+.+..+.....++.+..... .+ .+.......+.+.+.+... +...
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~~~~~g~~~~~~~-~~~~ 73 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS---SN--------ITVLIIARFLQGFGAAFAL-VAGA 73 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh---cc--------HHHHHHHHHHHHHHHHHHH-HhHH
Confidence 3456778889999999999999999888877777666655332 11 2333333344443333333 4445
Q ss_pred hhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc-cchhhHHHHhhHHHhhheeeeccc
Q 018767 269 VIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS-SGTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 269 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
.+..|.+|++.|+++.+..+....+|..++|.+.+.+.+..+ ...+.+.+....+..+...+..||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 889999999999999999999999999999999999887643 345555555555555555444444
No 181
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.30 E-value=6.2e-11 Score=102.59 Aligned_cols=169 Identities=15% Similarity=0.079 Sum_probs=113.4
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehh
Q 018767 139 DLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMI 216 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~ 216 (350)
..+|++.++..+..-.+..+.......... .+..+..-++.. .......+..++.++++|.++||++||++++.
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~----wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALA----WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence 456777777777766666655443222222 233333333322 55556667778888999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHH
Q 018767 217 SAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAW 296 (350)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 296 (350)
+-++..+....+.+.......+ .+..+...++.+.+. ....|...+.+.|+.|+++...++++.....++...
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~------~~~Ll~~~fl~g~~~-a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~ 153 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLS------PWLLLILTFLLGIGS-AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARI 153 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHh
Confidence 9888777666665544433222 344444444444333 344455559999999999999999999999999999
Q ss_pred HHHHHhHHHHhh-hccchhhHHH
Q 018767 297 AVSYTFNFLMSW-SSSGTFFIYS 318 (350)
Q Consensus 297 ~~~~~~~~l~~~-~~~~~~~~~~ 318 (350)
+||.++|.+... +....+.+-+
T Consensus 154 iGPalgG~Lva~~G~~~~f~ina 176 (524)
T PF05977_consen 154 IGPALGGILVAFFGAAAAFLINA 176 (524)
T ss_pred ccchHHHHHHHHHHHHHHHHHHH
Confidence 999999998876 3334444333
No 182
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.30 E-value=7.3e-12 Score=99.60 Aligned_cols=110 Identities=18% Similarity=0.090 Sum_probs=87.7
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.....+++..++.++.+|.++||+|||+++.++.+..++...+.+.... ...+...-+.++.+.. ..
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~------------F~afv~aR~l~Gi~kg-nl 138 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN------------FAAFVLARFLGGIFKG-NL 138 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHhhhhccC-ch
Confidence 6777888999999999999999999999999998888887777655432 2122222333434433 33
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
.+..++++|+++++.|+.+++..++...+|.++||.++|++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4445999999999999999999999999999999999999987
No 183
>PRK15075 citrate-proton symporter; Provisional
Probab=99.30 E-value=3.7e-11 Score=103.33 Aligned_cols=153 Identities=16% Similarity=0.076 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCchH---HHHH-----HHHHhhhHHhhHhhhhcccCCceeehhhhHH
Q 018767 149 VIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGKL---GTIL-----YACVQVPITVVGAFLMDKSGRRPLIMISAAG 220 (350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~ 220 (350)
......+..+....-...+....|.+.++++.++.+. .... ..+...++.++.|++.||+|||+.+..+..+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 3444455555555556677888888888888776541 1111 1222346788999999999999999999988
Q ss_pred HHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHH
Q 018767 221 TFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSY 300 (350)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 300 (350)
..++.++.++...... ...+.....++...+.+.+.+....... .++.|.+|+++|+++.++.....++|..+++.
T Consensus 96 ~~~~~~l~~~~~~~~~---~~~~~~~~l~~~R~l~G~~~g~~~~~~~-~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 96 MASGTLLIAFVPGYAT---IGLAAPLLVLLGRLLQGFSAGVELGGVS-VYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHhCCcHHH---HHHHHHHHHHHHHHHhhccccccHHHHH-HHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 8888777754321110 0000001123333333333333333344 89999999999999999999988888888877
Q ss_pred HhHHH
Q 018767 301 TFNFL 305 (350)
Q Consensus 301 ~~~~l 305 (350)
+.+.+
T Consensus 172 ~g~~l 176 (434)
T PRK15075 172 LGYLL 176 (434)
T ss_pred HHHHH
Confidence 77665
No 184
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.29 E-value=9.5e-11 Score=100.46 Aligned_cols=161 Identities=12% Similarity=0.035 Sum_probs=91.6
Q ss_pred hhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 166 GIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 166 ~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
....+.+.++ ++.+.+..+ .......+...+++++.|+++||+|||+.+.++..+..+..............
T Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----- 102 (420)
T PRK09528 28 SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLL----- 102 (420)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 3344445444 447888766 77888899999999999999999999999877655544433222111100000
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCC--cchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP--INIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAF 320 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (350)
...............+....... ....+..+ .+.++...|.......+|..++|.+.+.+.+.++...++..++.
T Consensus 103 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~ 179 (420)
T PRK09528 103 --QYNILLGAIVGGIYLGFGFLAGA-GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGS 179 (420)
T ss_pred --HHHHHHHHHHHHHHhhhhhccch-hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHH
Confidence 00011111111111111111111 11112211 23457778888888999999999999998876666666665555
Q ss_pred hHHHhhheeeeccc
Q 018767 321 SVITVLFVAKFVPE 334 (350)
Q Consensus 321 ~~~~~~~~~~~~~~ 334 (350)
..+..+..+...++
T Consensus 180 ~~~~~~~~~~~~~~ 193 (420)
T PRK09528 180 ALILLVLLFFAKPD 193 (420)
T ss_pred HHHHHHHHhccccc
Confidence 55554444443333
No 185
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.28 E-value=9.7e-11 Score=112.81 Aligned_cols=188 Identities=14% Similarity=0.072 Sum_probs=109.4
Q ss_pred hhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch---HHHHHHHHHhhhHHhhHhhhhcccCCceee
Q 018767 139 DLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK---LGTILYACVQVPITVVGAFLMDKSGRRPLI 214 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~grr~~~ 214 (350)
++++++.+++++...++..+........+.....+... +.+.+... +......+..++.++++|+++||+|||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 45666666666655555444332222222222222221 11111112 445566777888999999999999999976
Q ss_pred hhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHH
Q 018767 215 MISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSG 294 (350)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 294 (350)
........+............+ .+..+++.++. +.......+...+++.|.+|++.|+.++|+.++...+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~s--------~~~l~~~~~l~-gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFHLNS--------VPLLFAALFLM-GIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA 156 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh--------HHHHHHHHHHH-HHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence 4322222222221111111111 23333333333 34444455666699999999999999999999999999
Q ss_pred HHHHHHHhHHHHhhhccchhhHHHHhhHHHhhheeeecccC
Q 018767 295 AWAVSYTFNFLMSWSSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
..++|.++|.+.+..++..+++..++..+.+++..++++++
T Consensus 157 ~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 157 ILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999999887555554444444444444444555543
No 186
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.28 E-value=8.2e-11 Score=102.48 Aligned_cols=144 Identities=17% Similarity=0.106 Sum_probs=92.9
Q ss_pred chhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhhHHHHHHHHHHHHHHHhccccc
Q 018767 164 INGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISAAGTFLGCFLAGTSFFLKGQNM 239 (350)
Q Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
++....+.+.+. ++.|.+..+ ..............+++|+++|| +|||+.+..+.++..++..++.... + .
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~---~-~- 111 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG---H-D- 111 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc---c-c-
Confidence 444555555554 667887665 33333333344445689999999 5999999999888888776664321 1 0
Q ss_pred ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcch--hhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhH
Q 018767 240 FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINI--KGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFI 316 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~ 316 (350)
.........+.+.+.+... +...++..|.+|++. |..+.++.+...++|..++|.+.+++.+. ++...|.+
T Consensus 112 -----~~~l~~~~~l~gig~g~~~-~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i 185 (500)
T PRK09584 112 -----AGIVYMGMATIAVGNGLFK-ANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFAL 185 (500)
T ss_pred -----HHHHHHHHHHHHHhhhccc-CCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 1222233333333333333 343488999998653 45678888999999999999999999886 44445555
Q ss_pred HH
Q 018767 317 YS 318 (350)
Q Consensus 317 ~~ 318 (350)
.+
T Consensus 186 ~~ 187 (500)
T PRK09584 186 SV 187 (500)
T ss_pred HH
Confidence 44
No 187
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.28 E-value=1.9e-10 Score=100.49 Aligned_cols=290 Identities=15% Similarity=0.141 Sum_probs=173.2
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----------------------
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII---------------------- 62 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~---------------------- 62 (350)
.+..+.++.|+|....++.+.+|+-|...+++-+.++|+......+|+++|.+++++.
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWI 318 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWI 318 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchh
Confidence 5778999999999999999999999999999999999999999999999999988755
Q ss_pred -hhhHHHhhchHHHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhh
Q 018767 63 -PWRILALTGLVPCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLF 141 (350)
Q Consensus 63 -~Wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (350)
.|..-|++.+.+.++..+.++++|+..+-.. +..++ +..+..+.++++...+ .... +.-++-+...++++
T Consensus 319 GAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~---~~~~~-~~~~~~k~~~~~~~~~-~~~~----~~ikdfp~s~~~ll 389 (735)
T KOG3626|consen 319 GAWWLGFLICGALLLFSAVPLFFFPKELPKSQ---KRKRA-RDLHVLKTESGGAKSD-KTFG----KKIKDFPKSIKRLL 389 (735)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCcccCcccc---ccchh-hhhcccccccccccCC-cchh----hhHHHHHHHHHHHh
Confidence 2666777777777777677777776542110 00000 0000000000000000 0000 00001123445555
Q ss_pred cccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHH-HhCCCCch---HHHHHHHHHhhhHHhhHhhhhcccC--Cceeeh
Q 018767 142 KSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFV-QAGLSSGK---LGTILYACVQVPITVVGAFLMDKSG--RRPLIM 215 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g--rr~~~~ 215 (350)
+|+ +.+...+........+..+..|+|.+++ +++.+.+. +...+...+..+|.+++|++..|+. .|....
T Consensus 390 ~N~----if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~ 465 (735)
T KOG3626|consen 390 SNP----IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAK 465 (735)
T ss_pred cCc----hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHH
Confidence 544 3444444555555556777888888775 57777655 3334444556778899999999875 344444
Q ss_pred hhhHHHHHHHHHHHHHHHh--------------------cc-c-----------------------c-------------
Q 018767 216 ISAAGTFLGCFLAGTSFFL--------------------KG-Q-----------------------N------------- 238 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~--------------------~~-~-----------------------~------------- 238 (350)
...+...+..+........ .. . +
T Consensus 466 ~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~ 545 (735)
T KOG3626|consen 466 FVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCT 545 (735)
T ss_pred HHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCc
Confidence 4444444433332111110 00 0 0
Q ss_pred ----cc----------------------------cC-c-hhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHh
Q 018767 239 ----MF----------------------------LD-W-VPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAG 284 (350)
Q Consensus 239 ----~~----------------------------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 284 (350)
.. .+ . .....++..++..+..+.+..|.. .++...+|++.|+.+.
T Consensus 546 ~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~-~i~LR~V~~e~ks~Al 624 (735)
T KOG3626|consen 546 ESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGM-LIVLRCVPPEEKSFAL 624 (735)
T ss_pred ccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcce-EEEEEccCchhchhhh
Confidence 00 00 0 012223333333333444444554 7888999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHhHHHHhh
Q 018767 285 SLVVLV-NWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 285 ~~~~~~-~~~g~~~~~~~~~~l~~~ 308 (350)
|+..++ +-+|.+-+|++.|++.|.
T Consensus 625 G~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 625 GFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHHHhcCCchHhhhhhHhh
Confidence 999887 455777799999999863
No 188
>PRK10133 L-fucose transporter; Provisional
Probab=99.27 E-value=2.2e-10 Score=98.32 Aligned_cols=134 Identities=16% Similarity=-0.024 Sum_probs=100.8
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
........|.+.++++.+..+ .......++..+++++.|++.||+|||+++..+..+..++.+++......++
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~----- 116 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMN----- 116 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 456667788888888888766 7778888999999999999999999999999999998888876532221111
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
....+....+.+.+.+......+ .++.|..|++.|....+..+....+|..++|.+.+.+.
T Consensus 117 ---~~~ll~~r~l~G~g~g~~~~~~~-~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 117 ---YTLFLVGLFIIAAGLGCLETAAN-PFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhhHH-HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23444445555555555555555 77778777776667889999999999999999877654
No 189
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.26 E-value=8.6e-11 Score=113.51 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=84.3
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
+......++.+++++++|+++||+|||++++.+.++..+..++..+.....+ .+..++..++.+.+.+ ...
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~-~~~ 121 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW--------FWLAFAVTFLLGAQSA-IYS 121 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc--------HHHHHHHHHHHHHHHH-hhc
Confidence 4455667778889999999999999999998887666555555443332221 2333333444443333 344
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
+...+++.|.+|++.|+.++|+......+|..+++.+++.+.+.
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55558999999999999999999999999999999999988765
No 190
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.26 E-value=3.1e-10 Score=96.66 Aligned_cols=188 Identities=13% Similarity=0.042 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhc----ccCCceeehhh-hH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMD----KSGRRPLIMIS-AA 219 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d----~~grr~~~~~~-~~ 219 (350)
++++.........++. +.....+.+.+.++.|.+... .......+.+++..++.|+++| |+|||+.++.+ ..
T Consensus 4 ~~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLRVASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 3444444444444444 444455566677888887655 6677788889999999999999 59999998775 44
Q ss_pred HHHHHHHHHHHHHHhcc------cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchh--hhHhHHHHHHH
Q 018767 220 GTFLGCFLAGTSFFLKG------QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIK--GVAGSLVVLVN 291 (350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~~~~~~~~ 291 (350)
...++..++........ +.....+..+..+....+..........+.. +++.|..|+++| +.+.++.+...
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~r-ALiaDl~p~~~~~~~~a~~~~~~~~ 161 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCR-AFLADLTGGDARRTRIANAYFSFFM 161 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccCchhHHHHHHHHHHHHHH
Confidence 44444444433211100 0000000012223333344445555555665 999999998865 57999999999
Q ss_pred HHHHHHHHHHhHHHH--hh--------------hccchhhHHHHhhHHHhhheeeecccCC
Q 018767 292 WSGAWAVSYTFNFLM--SW--------------SSSGTFFIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 292 ~~g~~~~~~~~~~l~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
.+|+.+++.+.+... +. +....|.+-+++..+..++..+..+|..
T Consensus 162 ~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 162 AIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 999999999988652 11 1123455555666666667777788764
No 191
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.25 E-value=8.8e-11 Score=99.23 Aligned_cols=158 Identities=13% Similarity=-0.029 Sum_probs=96.7
Q ss_pred hhhhHHH-HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehh-hhHHHHHHHHHHHHHHHhcccccccC
Q 018767 167 IGFYTSE-TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMI-SAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 167 ~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.....|. +.++.+.+..+ .......+...+..++.|+++||+|||+.++. +.....++....... ++
T Consensus 16 ~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~---~~------ 86 (375)
T TIGR00899 16 QFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN---RN------ 86 (375)
T ss_pred HhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc---ch------
Confidence 3344444 44567877666 55666777888889999999999999887654 333334443443221 11
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhH--hHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHH
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVA--GSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSA 319 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~ 319 (350)
.+..+....+.+. ......+...++..|..|++.|+.+ .+.......+|..++|.+.+.+.+. ++...+.+.+.
T Consensus 87 --~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 87 --YFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred --HHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 1222222222222 2223344444677787777766644 5777778889999999999998876 44455666666
Q ss_pred hhHHHhhheeeecccCC
Q 018767 320 FSVITVLFVAKFVPETK 336 (350)
Q Consensus 320 ~~~~~~~~~~~~~~~~~ 336 (350)
...+..+..+++.||.+
T Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 55555555545566543
No 192
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.22 E-value=5.7e-10 Score=93.14 Aligned_cols=158 Identities=13% Similarity=0.032 Sum_probs=115.7
Q ss_pred chhhhhhHHHHHHHhCCCCch---HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK---LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
=...++..|++.+++|++..+ .....+..+..++.+++|+++||+|.|+++..+.+...+..++.++...
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S------- 114 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS------- 114 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 345666778888899998876 6677788889999999999999999999999999888888888766432
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccch--hhHHH
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGT--FFIYS 318 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~--~~~~~ 318 (350)
.....+.-++++.+-+... + ...++...+|+++|++++|+.+....+|.++++.+.+.+...++... ...+.
T Consensus 115 ----l~~L~i~R~llGvaEA~~~-A-~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Is 188 (511)
T TIGR00806 115 ----VWHMQLMEVFYSVTMAARI-A-YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIIS 188 (511)
T ss_pred ----HHHHHHHHHHHHHHHHHHH-H-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 2334444455555555555 4 45899999999999999999999999999999999998554433222 22233
Q ss_pred HhhHHHhhheeeeccc
Q 018767 319 AFSVITVLFVAKFVPE 334 (350)
Q Consensus 319 ~~~~~~~~~~~~~~~~ 334 (350)
....+.+++..+++|.
T Consensus 189 l~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 189 LVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 3333444444456663
No 193
>TIGR00898 2A0119 cation transport protein.
Probab=99.22 E-value=5.8e-11 Score=104.41 Aligned_cols=151 Identities=19% Similarity=0.153 Sum_probs=104.0
Q ss_pred hHHHHHHHhCCC---Cch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCch
Q 018767 170 YTSETFVQAGLS---SGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWV 244 (350)
Q Consensus 170 ~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
+.+.+.++.+.+ ..+ .......++.+++.++.|+++||+|||+++.++.++..++.+..++.. +
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~---~-------- 179 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP---N-------- 179 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc---c--------
Confidence 445555666666 333 777888899999999999999999999999988888777776654321 1
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhHHH
Q 018767 245 PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSVIT 324 (350)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (350)
.+..++...+.+ .......+...+++.|.+|++.|+.+.++......+|..++|.+...+.+ +...+.+.++..++.
T Consensus 180 ~~~~~~~r~l~G-~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--wr~~~~~~~i~~~~~ 256 (505)
T TIGR00898 180 YTVFLVFRLLVG-MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD--WRWLQLAVSLPTFLF 256 (505)
T ss_pred HHHHHHHHHHHH-hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHH
Confidence 233333333333 33333345556899999999999999999988899999999988766554 344455555444444
Q ss_pred hhheeeecccC
Q 018767 325 VLFVAKFVPET 335 (350)
Q Consensus 325 ~~~~~~~~~~~ 335 (350)
.+.. +++||+
T Consensus 257 ~~~~-~~~~es 266 (505)
T TIGR00898 257 FLLS-WFVPES 266 (505)
T ss_pred HHHH-HhcCCC
Confidence 3333 556764
No 194
>PRK09952 shikimate transporter; Provisional
Probab=99.21 E-value=3.2e-10 Score=97.55 Aligned_cols=112 Identities=20% Similarity=0.084 Sum_probs=75.4
Q ss_pred HHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhh
Q 018767 191 ACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVI 270 (350)
Q Consensus 191 ~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (350)
.++..+++++.|+++||+|||+.+..+..+..++.++.++........ .+.....+..-.+.+.+.+...... ..+
T Consensus 74 ~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~R~l~G~~~g~~~~~~-~~~ 149 (438)
T PRK09952 74 FLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIG---WWAPVLLVTLRAIQGFAVGGEWGGA-ALL 149 (438)
T ss_pred HHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHH---HHHHHHHHHHHHHHHhhhcccHHHH-HHH
Confidence 345668888899999999999999999888888877775532211000 0000122333333343343333344 489
Q ss_pred hcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 271 MSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 271 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
+.|.+|+++|+...+..+....+|..+++.+...+.
T Consensus 150 ~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~ 185 (438)
T PRK09952 150 AVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLIS 185 (438)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888877666554
No 195
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.21 E-value=4.8e-10 Score=94.64 Aligned_cols=143 Identities=20% Similarity=0.230 Sum_probs=106.8
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.......+++++|+++.++++||+|||..+.+..++..++.++.......+. ....+++-++.+...+....
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~--------~e~li~GR~i~Gl~~gl~~~ 135 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPS--------FEMLILGRLIVGLACGLSTG 135 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHHhHHHHH
Confidence 4456678899999999999999999999999998888888888877665544 45556666666666666666
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh-HHHHhh-hccchhhHHHHhhHHHhhheeeecccCC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF-NFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~-~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
..+ .+..|..|++.||....+......+|..++..++ ..+... ..|........+..+..++...+.||+.
T Consensus 136 ~~p-myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESP 208 (485)
T KOG0569|consen 136 LVP-MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESP 208 (485)
T ss_pred HHH-HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 666 8999999999999999999999999988885544 333333 2233444445555555666667888864
No 196
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.17 E-value=3.1e-10 Score=95.13 Aligned_cols=160 Identities=14% Similarity=-0.001 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHHhCCCCchHHH-HHHHHHhhhHHhhHhhhhccc-----CCceee-hhhhHHHHHHHHHHHHHHHhcccc
Q 018767 166 GIGFYTSETFVQAGLSSGKLGT-ILYACVQVPITVVGAFLMDKS-----GRRPLI-MISAAGTFLGCFLAGTSFFLKGQN 238 (350)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~-----grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
......|.+.++.|.+..+... ....+...+ .++.|+++||+ |||+.+ ..+.+...+....+++. .+..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~---~~~~ 81 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL---VPST 81 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC---Ccch
Confidence 3455667788888988877222 112333333 88999999997 888875 44555555544444221 1111
Q ss_pred cccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-h--------
Q 018767 239 MFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-S-------- 309 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~-------- 309 (350)
. .+.......+...+. ....+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+. +
T Consensus 82 ~-----l~~l~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~ 155 (356)
T TIGR00901 82 D-----LPLLAGLAFLIAFFS-ATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITL 155 (356)
T ss_pred h-----HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 0 122222222233222 223344448899999999999999999999999999999999888766 3
Q ss_pred ccchhhHHHHhhHHHhhheeeecccC
Q 018767 310 SSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
+...+.+.++...+..+...+..||+
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 33345444444444333333334554
No 197
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.17 E-value=5.8e-10 Score=97.14 Aligned_cols=162 Identities=12% Similarity=0.090 Sum_probs=101.9
Q ss_pred chhhhhhHHHHHHHhCCCCchHHHH-HHHHHhhhHHhhHhhhhccc-----CCcee-ehhhhHHHHHHHHHHHHHHHhcc
Q 018767 164 INGIGFYTSETFVQAGLSSGKLGTI-LYACVQVPITVVGAFLMDKS-----GRRPL-IMISAAGTFLGCFLAGTSFFLKG 236 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~-----grr~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
........|.+.++.|.+..+.... ..... .++.+++|+++||+ |||+. +..+.+...++...++... +
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~---~ 103 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE---P 103 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC---C
Confidence 3455556777778888776552222 12222 36889999999999 99986 5455555555555543321 1
Q ss_pred cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh-h-hccchh
Q 018767 237 QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS-W-SSSGTF 314 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~-~~~~~~ 314 (350)
..+ .+.......+...+.+ ...+...++..|.+|+++|+++.++......+|..+++.+.+.+.+ . ++...+
T Consensus 104 ~~~-----l~~l~~~~~l~~~~~a-~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f 177 (491)
T PRK11010 104 GTQ-----LRWLAALAVVIAFCSA-SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMY 177 (491)
T ss_pred cch-----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHH
Confidence 110 1222323333333333 3334445899999999999999999999999999999999998887 3 455566
Q ss_pred hHHHHhhHHHhhheeeecccCC
Q 018767 315 FIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
++.+++..+..+.. ++.||++
T Consensus 178 ~i~a~l~ll~~l~~-~~~~e~~ 198 (491)
T PRK11010 178 WLMAALLIPCIIAT-LLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHH-HhcCCCc
Confidence 66665555443333 3456653
No 198
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.16 E-value=6.6e-10 Score=94.69 Aligned_cols=165 Identities=13% Similarity=0.093 Sum_probs=105.7
Q ss_pred HHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhccc-----CCce-eehhhhHHHHHHHHHHHH
Q 018767 159 QQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKS-----GRRP-LIMISAAGTFLGCFLAGT 230 (350)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~-----grr~-~~~~~~~~~~~~~~~~~~ 230 (350)
.+...........|.++++.|.+.++ ....... -.+..+++|+++||+ |||| .+..+....+++...+..
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~--~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQ--AYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF 87 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH--HHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 33334556677788899999999887 2222222 257889999999999 7776 566666666666555433
Q ss_pred HHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh--
Q 018767 231 SFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-- 308 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 308 (350)
. .+..+ .+.......+.. .......+...+++.|..|+++|+++.++......+|..+++.+.+.+.+.
T Consensus 88 ~---~~~~~-----~~~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~ 158 (402)
T PRK11902 88 C---PPHAA-----LWPLAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL 158 (402)
T ss_pred c---Cccch-----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc
Confidence 2 11110 222232323333 333334444458999999999999999999999999999999998888774
Q ss_pred hccchhhHHHHhhHHHhhheeeecccC
Q 018767 309 SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
++...+++.+++..+..+. .++.+|+
T Consensus 159 gw~~~f~i~a~~~l~~~l~-~~~~~e~ 184 (402)
T PRK11902 159 GWGNTYLLMAGLMLAGALT-TLWAPEP 184 (402)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhcCCC
Confidence 4445555555555443332 3445554
No 199
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.16 E-value=3.6e-10 Score=94.67 Aligned_cols=131 Identities=16% Similarity=0.138 Sum_probs=95.1
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
+.......|.+.++++.+..+ +......++..++.++.|++.||+|||+.+..+..+..++.+.. . .++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~---~~~----- 86 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S---APG----- 86 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H---hcc-----
Confidence 344566788888999988876 77788889999999999999999999999988777666554443 1 111
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.+..+....+.+.+.+....... ..+.|.+| ++|+++.++.+....+|..+++.+.+.+.+.
T Consensus 87 ---~~~l~~~~~~~g~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 87 ---TALLFAGTALIGVGIAIINVLLP-SLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ---HHHHHHHHHHHHHHHHHHhccch-HHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23333333344444443333333 66778776 5799999999999999999999998888765
No 200
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.14 E-value=5.5e-10 Score=86.39 Aligned_cols=166 Identities=14% Similarity=0.127 Sum_probs=109.2
Q ss_pred hhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccc
Q 018767 161 FVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQN 238 (350)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
....+.+..|.|.+.+..+++.++ .......++..+ .++.|.+.|++|.+.++.++.....++...+.......-..
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 334677889999999999999887 555555666665 48889999999999999999999998888775554332211
Q ss_pred cccCchhHHHHHHHHHHHHHHhhcc-cchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHH
Q 018767 239 MFLDWVPVLAVGGILIYIAFFSIGF-GAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIY 317 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 317 (350)
. +.+.+. ...+.++.+..+ .........+.||. +||++.|+.-....+++.+-..+...+.+.+........
T Consensus 94 ~-----~~~~~~-~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~l 166 (250)
T PF06813_consen 94 L-----PVWLMC-LFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFL 166 (250)
T ss_pred c-----chHHHH-HHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHH
Confidence 0 222222 222222333322 22222445578885 699999999999999998888888777665444444455
Q ss_pred HHhhHHHhhheeeeccc
Q 018767 318 SAFSVITVLFVAKFVPE 334 (350)
Q Consensus 318 ~~~~~~~~~~~~~~~~~ 334 (350)
+....+.+++...+++.
T Consensus 167 a~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 167 AVLPAVVCLVAMFFVRP 183 (250)
T ss_pred HHHHHHHHHHHhhheec
Confidence 55445444444444443
No 201
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.13 E-value=4.2e-10 Score=95.77 Aligned_cols=165 Identities=16% Similarity=0.085 Sum_probs=95.7
Q ss_pred chhhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccc
Q 018767 164 INGIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
......+.|.+. ++.+.+..+ .......+...++.++.|+++||+|||+.+..+.....+...........+....
T Consensus 18 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 96 (396)
T TIGR00882 18 MSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQS- 96 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-
Confidence 334444555544 456877766 7788889999999999999999999999998766555443333211111000000
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHh
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAF 320 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (350)
.............+...+....... .+..|..+ .++...|.......+|..++|.+.+.+.+.++...+++.+.+
T Consensus 97 --~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~ 171 (396)
T TIGR00882 97 --NILVGAIVGGLYLGFVFSAGAGAIE-AYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGF 171 (396)
T ss_pred --HHHHHHHHHHHHHHHHhccchhhHH-HHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHH
Confidence 0001111112222323333332332 55555432 234566777888899999999999988776666666666666
Q ss_pred hHHHhhheeeeccc
Q 018767 321 SVITVLFVAKFVPE 334 (350)
Q Consensus 321 ~~~~~~~~~~~~~~ 334 (350)
..+..++.+...++
T Consensus 172 ~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 172 ALILMLLLMFAKPK 185 (396)
T ss_pred HHHHHHHHHHhCCC
Confidence 55555444333333
No 202
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=1.4e-10 Score=93.00 Aligned_cols=141 Identities=13% Similarity=0.047 Sum_probs=112.2
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
+......+.+++.+++.|.+.||+|+|-.+++|..++..+.+++++... ....+++-.+-+.+......
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s-----------y~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS-----------YPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch-----------hHHHHHHHHHhhhhHHHHHh
Confidence 7788889999999999999999999999999999999999999866532 23334444444444444444
Q ss_pred chhhhhhcccCCcch-hhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHHhhheeeecccCCC
Q 018767 265 AVPWVIMSEIFPINI-KGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
+- .++++|.+|.+. |++++|+.-.+..+|-.++|.++|.+++. +...+|.+.++++++-..+.++.++.++.
T Consensus 179 sg-lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 179 SG-LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred hh-HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 44 489999999876 69999999999999999999999999998 66778888888888887776666655443
No 203
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.09 E-value=1.2e-09 Score=93.04 Aligned_cols=111 Identities=20% Similarity=0.186 Sum_probs=74.7
Q ss_pred HHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhh
Q 018767 192 CVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIM 271 (350)
Q Consensus 192 ~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (350)
+...+++++.|+++||+|||+.+..+.++..++.++........... .+.....+....+.+.+.+...... ..++
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~-~~~~ 121 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIG---IWAPILLLLARLIQGFSLGGEWGGA-ALYL 121 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhH---HHHHHHHHHHHHHHHhhcccccccc-HHHh
Confidence 34456889999999999999999999888888777764432111000 0000112222233333333333334 4889
Q ss_pred cccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 272 SEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 272 ~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
.|.+|+++|+...+..+....+|..+++.+...+.
T Consensus 122 ~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 122 AEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred hhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988876654
No 204
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.09 E-value=4.3e-09 Score=89.39 Aligned_cols=157 Identities=11% Similarity=-0.072 Sum_probs=88.8
Q ss_pred hhhhHHH-HHHHhCCCCch--HHHHHHHH-HhhhHHhhHhhhhcccCCceeeh-hhhHHHHHHHHHHHHHHHhccccccc
Q 018767 167 IGFYTSE-TFVQAGLSSGK--LGTILYAC-VQVPITVVGAFLMDKSGRRPLIM-ISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 167 ~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~g~l~d~~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
.....+. +.++.+.+..+ .......+ +...+.+.+++ .||+|||+.++ .+.+...++........ +
T Consensus 34 ~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~----- 104 (393)
T PRK15011 34 QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNR---N----- 104 (393)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhh---H-----
Confidence 3344444 45667887766 33333334 44455555555 99999998754 44444334443332221 1
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchh--hhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHH
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIK--GVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYS 318 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~ 318 (350)
.+..+.......+. .....+....+..|..|++.| +...+..+....+|..++|.+.+.+.++ ++...+...+
T Consensus 105 ---~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 105 ---YFVLLFVGVFLSSF-GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred ---HHHHHHHHHHHHHH-HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 12222222222222 233444444666676665544 3345777888899999999999999876 5555566666
Q ss_pred HhhHHHhhheeeecccCC
Q 018767 319 AFSVITVLFVAKFVPETK 336 (350)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~ 336 (350)
+..++.++..+++.||.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHhhcCccC
Confidence 666666665556667653
No 205
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.09 E-value=1.1e-09 Score=96.55 Aligned_cols=136 Identities=20% Similarity=0.186 Sum_probs=102.4
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
....+..++.++|+++.|.++||+|||++++.+.++..++.+..++.. ........-.+.+++..+..
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~------------~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP------------NYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC------------cHHHHHHHHHHHHhhccchh
Confidence 677888899999999999999999999999999999998887765543 24444555555556666666
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhHHHhhheeeecccC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
.+.+.++.|.++++.|+.+..+ ......++.+++...+++.. ++.+.+++......+..++ +++.+|.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 6667999999999999999999 88888888889888888876 3444444444444444333 4445464
No 206
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.08 E-value=3.1e-10 Score=95.08 Aligned_cols=291 Identities=14% Similarity=0.125 Sum_probs=149.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc------h-----------h
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------P-----------W 64 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------~-----------W 64 (350)
.-+.++++|++.|+|.| .....-+|+++....++|.++++....+..+|.++||.++..+ | .
T Consensus 129 ~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~Y 207 (488)
T KOG2325|consen 129 VKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMY 207 (488)
T ss_pred hHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEec
Confidence 34678999999999977 6678889999999899999999999998888888888776554 2 2
Q ss_pred hHHHhhchHHHHHH-HHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcc
Q 018767 65 RILALTGLVPCVLL-LVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKS 143 (350)
Q Consensus 65 r~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (350)
..+-|+.++..++. +++..+++|.++--.+++..+ + ++. +.+....+ ..+
T Consensus 208 Tap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~------------------~-~~~--------~~~~~~~~--~~~ 258 (488)
T KOG2325|consen 208 TAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRS------------------V-EEE--------KSDIEKVK--KPK 258 (488)
T ss_pred chHHHHHHHHHHHHHHHHHhheeecccCcccccccc------------------c-hhh--------ccchhhhc--cCC
Confidence 34566777777774 445566777653110000000 0 000 00000000 011
Q ss_pred cchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch---HHHHHHHHHhhhH---HhhHhhhh-cccCCceeehh
Q 018767 144 KYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK---LGTILYACVQVPI---TVVGAFLM-DKSGRRPLIMI 216 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~g~l~-d~~grr~~~~~ 216 (350)
..+...+.+....+...+.....-..+.+.....++...++ .......+.+.+. .+..+... -++.+|+.+..
T Consensus 259 ~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~ 338 (488)
T KOG2325|consen 259 LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILL 338 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeee
Confidence 12222233333333333332222334444444455555544 2222222222222 22222222 23345556555
Q ss_pred hhHHHHHHHHHHHHHHHhccc--c-----------cccCc------hhHHH-HHH-HHHHHHHHhhcccchhhhhhcccC
Q 018767 217 SAAGTFLGCFLAGTSFFLKGQ--N-----------MFLDW------VPVLA-VGG-ILIYIAFFSIGFGAVPWVIMSEIF 275 (350)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~------~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~e~~ 275 (350)
+.+.......+.......... + ....| .+... ++. ..+++..+-....+.. +.-+|+.
T Consensus 339 g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~-tlySkiL 417 (488)
T KOG2325|consen 339 GFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALD-TLYSKIL 417 (488)
T ss_pred hHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHH-HHHHHHh
Confidence 533333333322111111100 0 00000 00111 111 1111111111122343 7778888
Q ss_pred CcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhHH
Q 018767 276 PINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSVI 323 (350)
Q Consensus 276 p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (350)
.++.+++..+++......+..++|.+........+....+.+.....+
T Consensus 418 gp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l 465 (488)
T KOG2325|consen 418 GPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLL 465 (488)
T ss_pred CCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHH
Confidence 999999999999999999999999998888777555555554444333
No 207
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.03 E-value=3.9e-09 Score=92.68 Aligned_cols=137 Identities=21% Similarity=0.147 Sum_probs=104.4
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
+......++..+++++.|+++|++|||+.+.++.+...++.++.+.+.. ......+-.+.+.+.+....
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~-----------~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS-----------WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh-----------HHHHHHHHHHhccchhhhhh
Confidence 7777888999999999999999999999999999999999999877652 45666677777777777666
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh---hccchhhHHHHhhHHHhhheeeecccC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW---SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
..+ .+.+|..|++.||...+..+....+|..++ ++.+...++ ++...+.+..+.+++..+. .++.||+
T Consensus 162 ~~p-iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 162 LAP-VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred cch-hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 676 999999999999999999999988888877 555554443 2333333334444444444 6777765
No 208
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.99 E-value=2.8e-09 Score=90.92 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=114.9
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
........+.+++.+.+|++.||+|-|+++..+.++.+++.++..+...... +..++.-.+.+.+.+..+.
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~---------~~~~~~R~lqGl~~g~~~p 147 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGF---------YLLLVLRFLQGLGQGVLFP 147 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcc---------hhhHHHHHHhHHHHhHHHh
Confidence 6778888999999999999999999999999999999999888866654432 3344445555555566555
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh--hccchhhHHHHhhHHHhhheeeecccC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW--SSSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
++. .+...-.|+++|++..++.....++|.+++-.+.|.+-+. ++...|++.+++..+..++.+++..+.
T Consensus 148 a~~-~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 148 AIG-SILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred hhh-ceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 555 8999999999999999999999999999999999999877 677788888988888877766665544
No 209
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.97 E-value=1e-08 Score=86.84 Aligned_cols=145 Identities=14% Similarity=-0.011 Sum_probs=87.6
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
......++|.+.++.+.+..+ .......+...++.++.|++.||+|||....-...+..+.. ... .....++
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~--~~~~~~~--- 93 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF-AVA--FWFGAHS--- 93 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH-HHH--HHHhccc---
Confidence 345566777788888888766 67777888889999999999999999532211111111111 111 1111111
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHh
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAF 320 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~ 320 (350)
.+..++...+.+.+.+. ..+...++..+. .++|+.+.+.......+|..++|.+.+.+.++ ++...++..++.
T Consensus 94 ---~~~l~i~~~l~g~~~~~-~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 94 ---FWLLFVAIGLFNLFFSP-LVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred ---HHHHHHHHHHHHHHHcc-cccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 23333333333333333 334443555554 34578888888999999999999999999887 555555544443
No 210
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.96 E-value=1.4e-08 Score=85.99 Aligned_cols=143 Identities=14% Similarity=-0.047 Sum_probs=89.7
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHH-HHHHHHHHHHHhcccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTF-LGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (350)
......+.|.+.++.|.+..+ .......+...++.++.|.++||+||+........... +..+.+ ....++
T Consensus 20 ~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~---- 93 (382)
T TIGR00902 20 YGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAF--SAGAHN---- 93 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH--HHhhhh----
Confidence 455566777888889988776 66667788888999999999999998543321111111 111111 111111
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHH
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSA 319 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~ 319 (350)
.+..++...+.+.+.+. ..+...++..|. +++|+.+.|.......+|..++|.+.+.+.+. ++...+.+...
T Consensus 94 ----~~~l~~~~~l~~~~~~~-~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 94 ----AWLLFIAIGLFALFFSA-GMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred ----HHHHHHHHHHHHHHHcc-chhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 23333333334444443 344454655442 46689999999999999999999999999887 44444544433
No 211
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.94 E-value=7.5e-09 Score=89.42 Aligned_cols=160 Identities=13% Similarity=-0.035 Sum_probs=97.2
Q ss_pred HHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc----cCCcee-ehhhhHHHHHHHHHHHHHHHhcccccccCc
Q 018767 171 TSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDK----SGRRPL-IMISAAGTFLGCFLAGTSFFLKGQNMFLDW 243 (350)
Q Consensus 171 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~----~grr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (350)
.+++.++.|.+... ...+...+...+..++.|+++|| +||||. ++.+.....++.+++.. .++... ..
T Consensus 23 ~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~---~~~~~~--~~ 97 (437)
T TIGR00792 23 LFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT---TPDFSA--TG 97 (437)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh---CCCCCc--ch
Confidence 33344567887766 67777888999999999999998 677554 55566666655555422 111110 00
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhhcccC-CcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh--------hccchh
Q 018767 244 VPVLAVGGILIYIAFFSIGFGAVPWVIMSEIF-PINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW--------SSSGTF 314 (350)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~~~~~~ 314 (350)
..........++..+.+....+.. ++..|.. ++++|++..+..+....+|+.+++.+.+.+... ++...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~-al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~ 176 (437)
T TIGR00792 98 KLVYAYITYILLGLFYSFVNIPYW-SLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFA 176 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHh-hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHH
Confidence 012223333344444444444544 7778876 467899999998888888888877776655532 222344
Q ss_pred hHHHHhhHHHhhheeeecccCC
Q 018767 315 FIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
.+.+++..+..++..+..+|++
T Consensus 177 ~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 177 LVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHcCCEecC
Confidence 5555555555555556666654
No 212
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.94 E-value=2e-09 Score=91.84 Aligned_cols=282 Identities=13% Similarity=0.091 Sum_probs=144.4
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccC--ccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAP--RNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
....++-++..+|......++-+.+.|... +++||...+.......+|.+++..+++.+ ++|..|.+.+++..+
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHH
Confidence 344556677788888888999999999874 34478888888888888999988888766 788888887766666
Q ss_pred HHHH-HhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHH-HHHH
Q 018767 78 LLVG-LCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVII-GVSL 155 (350)
Q Consensus 78 ~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 155 (350)
..+. ....+|.++ +.+. +... ..++.. +..... -++.-...++.++.+..+...+ ..++
T Consensus 167 ~~~~~~~~~~e~~~----~~~~-~~~~----~~~~~~---~~~~~~-------~~~~~~~l~~~~~~~~i~~~~~~~~~~ 227 (433)
T PF03092_consen 167 MLIVALFLLEERKV----RPAD-EVFS----FGKEEV---PCLFGS-------FREQLSELWRALQQRAIWQPILFFIFF 227 (433)
T ss_pred HHHHHHHhhhhccc----cccc-hhhc----cccccc---chhhHH-------HHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 5444 344444211 0000 0000 000000 000000 0001112344444433222222 1111
Q ss_pred HHHHHhhcchh-hhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHH
Q 018767 156 MVLQQFVGING-IGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSF 232 (350)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~ 232 (350)
....... ... ..++.......-++++.. ....+..++.++|..+..+...+..-|+++....++..+..+.-....
T Consensus 228 ~~~~~~~-~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv 306 (433)
T PF03092_consen 228 FNLPPSI-SSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLV 306 (433)
T ss_pred HHhccCC-CCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEE
Confidence 1111110 111 111111111111133322 334555566666666665555555555555544444333222211000
Q ss_pred Hhcc-cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 233 FLKG-QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 233 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
...+ .-...+ .+..+.-..+........+.|.. ..++|+.|+...|+..++..++.++|..++..++..+.+.
T Consensus 307 ~~~n~~~Gi~d--~~f~lgd~~l~~~~~~i~~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~ 380 (433)
T PF03092_consen 307 TRWNLDLGIPD--QWFALGDTILEEVIGMIAFMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL 380 (433)
T ss_pred EEEeeeeCcCC--eEEEEEhHHHHHHHHHHHHHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000000 11122222334444455555666 8899999999999999999999999999999999888764
No 213
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.90 E-value=5.2e-09 Score=87.11 Aligned_cols=176 Identities=16% Similarity=0.144 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhH-HHHHHHhC----CCCch--HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhh
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYT-SETFVQAG----LSSGK--LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISA 218 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~ 218 (350)
|........-..-.++ ++++...+ .++..+.+ +++++ .....+....-...+++|+++|| +|+|+.+..+.
T Consensus 21 r~l~~if~vE~WERFs-yYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGa 99 (498)
T COG3104 21 RGLYLIFFVELWERFS-YYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGA 99 (498)
T ss_pred chHHHHHHHHHHHHHh-hhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 4555544444444444 33333333 23334444 66655 33444444445577889999999 59999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcch--hhhHhHHHHHHHHHHHH
Q 018767 219 AGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINI--KGVAGSLVVLVNWSGAW 296 (350)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~ 296 (350)
++++++.++++.... .. .....+.+.....+.+..=.... .++.|++|++. |-.+.++.+...++|+.
T Consensus 100 il~~iGh~~L~~~~~-~~--------~~gl~i~L~~I~iG~Gl~K~NiS-~llg~ly~~~DprrD~gFt~fY~~iNiGsl 169 (498)
T COG3104 100 ILMAIGHLVLAISSV-SG--------PGGLYIGLALIIVGTGLFKPNIS-SLLGELYPKDDPRRDGGFTLFYMGINIGSL 169 (498)
T ss_pred HHHHHHHHHHhcccc-cc--------ccHHHHHHHHHHhccccccccHH-HHHHHhcCCCCcccCCCccEEEEEeehHHH
Confidence 999999999865420 00 22333333444444444334454 89999998754 57788888888999999
Q ss_pred HHHHHhHHHHhhhccchhhHHHHhhHHHhhheeeecc
Q 018767 297 AVSYTFNFLMSWSSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
++|.+.+++.+..++..-+..+.+....+++.+...+
T Consensus 170 ~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 170 IAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999885554444444444444444433333
No 214
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.88 E-value=1e-07 Score=79.64 Aligned_cols=318 Identities=14% Similarity=0.053 Sum_probs=169.1
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccc--hhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNL--RGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
...+.++-.+.++|.|..=+....++.|.+|+++ |-..++++.++.++|.+++|++.+++ ||...|-+.++-..
T Consensus 117 ~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~ 196 (498)
T COG3104 117 PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMI 196 (498)
T ss_pred ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 4567788888999999999999999999998654 66677888888899999999888877 89999988887666
Q ss_pred HHHHHHhccCC----ChHHHHHhC-ChHHHHHHHHHH----hcCC---cchHHHHHHH------HHH---HHhccCCCcc
Q 018767 77 LLLVGLCFVPE----SPRWLAKVG-LDKEFQVALRKL----RGKD---ADITREAAEI------QVY---ILTLRSLPKA 135 (350)
Q Consensus 77 ~~~~~~~~~~e----sp~~~~~~~-~~~~~~~~~~~~----~~~~---~~~~~~~~~~------~~~---~~~~~~~~~~ 135 (350)
+.++.+...+. ++.....+. +..+.......+ -... ....+..... ... ..+....++
T Consensus 197 ~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 275 (498)
T COG3104 197 IGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPK- 275 (498)
T ss_pred HHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-
Confidence 66555444332 110000000 001111000000 0000 0000000000 000 000000000
Q ss_pred hhhhhhcccchhHHH------HHHHHHHHHHhhcchhhhhhHHHHHHH--hCCCCch-HHHHHHHHHhhhHHhhHhhhhc
Q 018767 136 SIRDLFKSKYIRSVI------IGVSLMVLQQFVGINGIGFYTSETFVQ--AGLSSGK-LGTILYACVQVPITVVGAFLMD 206 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d 206 (350)
.. ..+++.. +...+.+...--..+.+..|.....+. .|++... +..+...+.-++.+++..++..
T Consensus 276 ----~~--~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~ 349 (498)
T COG3104 276 ----VF--DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWT 349 (498)
T ss_pred ----cH--HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHh
Confidence 00 1112222 111122222222223333333332221 2233333 6777777777777777777777
Q ss_pred ccCCc--ee-----ehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcch
Q 018767 207 KSGRR--PL-----IMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINI 279 (350)
Q Consensus 207 ~~grr--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 279 (350)
|.+++ .. +-++..++..+.+++.........+ ....+..+++...++..+.-....|+..+++....|++.
T Consensus 350 ~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~--~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~ 427 (498)
T COG3104 350 KLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGP--SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL 427 (498)
T ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH
Confidence 74433 21 2344444555544444432222110 111134445555555666677778888899999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHhHH-------HHhhhccchhhHHHHhhHHHhhhee
Q 018767 280 KGVAGSLVVLVNWSGAWAVSYTFNF-------LMSWSSSGTFFIYSAFSVITVLFVA 329 (350)
Q Consensus 280 r~~~~~~~~~~~~~g~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (350)
.+..++........|+.++..+.+. .........|...+....+......
T Consensus 428 ~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 428 KSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999888888888888777762 1112333445555555555555443
No 215
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.87 E-value=7.6e-08 Score=81.81 Aligned_cols=173 Identities=12% Similarity=-0.032 Sum_probs=99.7
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HH--HHHHHHHhhhHHhhH-hhhhcccCCceeehhhhHHHHH-HHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LG--TILYACVQVPITVVG-AFLMDKSGRRPLIMISAAGTFL-GCFL 227 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~-g~l~d~~grr~~~~~~~~~~~~-~~~~ 227 (350)
...++.+...+.....+.|.++++.|.+..+ .. ........++..++. ++..||.|||+..++...+... ....
T Consensus 7 ~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~ 86 (390)
T TIGR02718 7 GLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLAS 86 (390)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHH
Confidence 3344445444566778889999999988877 22 345566777777777 4478999999987555433222 2222
Q ss_pred HHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 228 AGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
+... ..... .....+... ....+......+....+..|..+++.++...+.......+|..+++...+.+.+
T Consensus 87 ~~~~--~~~~~-----~~~~~~~~~-~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~ 158 (390)
T TIGR02718 87 LALV--GPDVA-----GAGWAVGLL-ACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG 158 (390)
T ss_pred HHcC--Ccchh-----hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 11100 011112222 222222222233333566777777777777777777778888888888888877
Q ss_pred h-hccchhhHHHHhhHHHhhheeeeccc
Q 018767 308 W-SSSGTFFIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 308 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (350)
. ++...+++.+++..+..+..++..++
T Consensus 159 ~~gw~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 159 KFGQRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6 55556666666665555444333333
No 216
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.86 E-value=7.3e-08 Score=78.16 Aligned_cols=134 Identities=12% Similarity=-0.070 Sum_probs=101.9
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.......|.+.+.+..+..+ ........+..+.++..+++.+|+|+|+-++.+..++++++.++.-......
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~------ 103 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKS------ 103 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhh------
Confidence 34455667777777777666 7777788888999999999999999999999999999999998843333222
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
....+...++.+.+.+.--...+ .++..+.|++..+.-..+.+.++.+|++++|.+.+.+..
T Consensus 104 --y~~FL~~lFila~Gi~~LetaaN-p~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 104 --YGFFLVALFILASGIGLLETAAN-PYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred --HHHHHHHHHHHHhhhHHHHhccc-hHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 23333334444444444444555 889999999888888999999999999999999998876
No 217
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.86 E-value=2.3e-07 Score=78.01 Aligned_cols=268 Identities=15% Similarity=0.098 Sum_probs=139.1
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc------------hhh-HHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------------PWR-ILA 68 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------------~Wr-~~f 68 (350)
|-+.++..-.+.|+|.+..+...-.|++|..+++++.+..++.......+.++|..+-..+ +-+ ..+
T Consensus 101 N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~ 180 (461)
T KOG3098|consen 101 NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVF 180 (461)
T ss_pred chHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhc
Confidence 4556788899999999999999999999999999999999999888888888886654433 121 111
Q ss_pred ----------hhchH---HHHHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcc
Q 018767 69 ----------LTGLV---PCVLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKA 135 (350)
Q Consensus 69 ----------~~~~~---~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (350)
.+.++ +..+..+...+.|.+. ...+++.. +.....
T Consensus 181 ~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~-~~~~~~~~-------------------------------~~~~~~ 228 (461)
T KOG3098|consen 181 EVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD-VVNCKSSS-------------------------------ETSFSE 228 (461)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHhhheeecCccc-hhhhhhhc-------------------------------cccHHH
Confidence 11111 1111112222222211 00000000 000111
Q ss_pred hhh---hhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHH--HhCCCCch---HHHHHHHHHhhhHHhhHhhhhcc
Q 018767 136 SIR---DLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFV--QAGLSSGK---LGTILYACVQVPITVVGAFLMDK 207 (350)
Q Consensus 136 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~ 207 (350)
.++ +++++++...... ...............|...+.- ..+.+... ......+++.+++....+.+.+|
T Consensus 229 ~l~~~~~l~~~~~ml~L~~---~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~r 305 (461)
T KOG3098|consen 229 LLKLTFKLLKTPKMLLLFP---FFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKR 305 (461)
T ss_pred HHHHHHHHhcCHhHHHHHH---HHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence 122 2233322222222 1111111112233333333322 22333322 44555667777777777777765
Q ss_pred ---cCCceeehhhhHHHHHHHHHHHHHHHhccc-----ccccCch--hHHHHHHHHHHHHHHhhcccchhhhhhcccCCc
Q 018767 208 ---SGRRPLIMISAAGTFLGCFLAGTSFFLKGQ-----NMFLDWV--PVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI 277 (350)
Q Consensus 208 ---~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 277 (350)
+||++.+.++..+..+..++.-.......+ .....+. ....+++....+.. -.......+.++.+.+ +
T Consensus 306 ir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~-D~~~~t~~~~ii~~~~-~ 383 (461)
T KOG3098|consen 306 IRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFG-DACFNTQRYVIIALLY-P 383 (461)
T ss_pred hhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhH-HHHHHHHHHHHHHHHh-c
Confidence 688888888877776666665433321110 1110111 11222222333322 2333444457788888 4
Q ss_pred chhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 278 NIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 278 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
+.|..+.++.-.-..+++.++-...+...
T Consensus 384 ~~~~~~fsi~kfyq~~~s~v~~f~~~~~~ 412 (461)
T KOG3098|consen 384 DDRAQAFSLFKFYQSVASCVAFFFSPYLL 412 (461)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 56888888888888887776665555443
No 218
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.8e-08 Score=87.15 Aligned_cols=175 Identities=19% Similarity=0.138 Sum_probs=127.3
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
|......++...........+..+.+.+.++++.+..+ +...+......+..++.+.+.||+|.|.+.+.|.++..++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 44555555555555555556666777788888877775 7777777788888999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 225 CFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.++..+.... ....+..-.+.+.+.++.+.|.. ..+...| +++|+.++|+......+|.++-|.+...
T Consensus 125 ~~lssF~~~i----------~~l~lt~gvi~G~G~~~~~~pai-viv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 125 LLLSSFATSL----------WQLYLTFGVIGGLGLGLIYLPAV-VILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHHhhH----------HHHHHHHHHHhhccchhhhcchh-hhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 8887665432 12233333445555666666665 6666555 5669999999999999999999999888
Q ss_pred HHhh-hccchhhHHHHhhHHHhhheeeecc
Q 018767 305 LMSW-SSSGTFFIYSAFSVITVLFVAKFVP 333 (350)
Q Consensus 305 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (350)
+.+. ++.....+++.+.+-.++......|
T Consensus 193 l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 193 LLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8876 7777788877777655555544444
No 219
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=1.8e-08 Score=85.71 Aligned_cols=253 Identities=14% Similarity=0.085 Sum_probs=150.0
Q ss_pred ccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHHH-HHHHhccCCChHHH
Q 018767 18 GVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVLL-LVGLCFVPESPRWL 92 (350)
Q Consensus 18 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~-~~~~~~~~esp~~~ 92 (350)
+.......++++|....++|....++....+..+..++|.+++.+ |--.+|.+..+..++. ...+.++||+-.-
T Consensus 127 ~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~- 205 (463)
T KOG2816|consen 127 SAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE- 205 (463)
T ss_pred hhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc-
Confidence 345667889999999999999999999998888888998888876 6667888888777774 4556778997521
Q ss_pred HHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHHHHHhhc---ch-hhh
Q 018767 93 AKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVG---IN-GIG 168 (350)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~ 168 (350)
+.+.+ ...++......+.+ .....++...+....+..+..+....+....- .. ...
T Consensus 206 --~~~~~---~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~ 265 (463)
T KOG2816|consen 206 --KERSD---ATLRELTPGSLDSS---------------HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLL 265 (463)
T ss_pred --ccccc---ccccccCCCcccch---------------hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEE
Confidence 11100 00000000000000 00011111111111122222222222221111 11 111
Q ss_pred hhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHh-hhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchh
Q 018767 169 FYTSETFVQAGLSSGK--LGTILYACVQVPITVVGA-FLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVP 245 (350)
Q Consensus 169 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g-~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (350)
+|. ...++.+... ...+.......++..+.. .+...+|.|+.+..|...-.+....+++... .
T Consensus 266 ~yl---~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~-----------~ 331 (463)
T KOG2816|consen 266 LYL---KAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE-----------T 331 (463)
T ss_pred EEE---eeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc-----------c
Confidence 221 1234566555 455556666667776665 7778889888888888777777777655432 2
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
|..... .... .......+...+.++...+++.+|.+.++...+..+.+.++|.+.+.+..
T Consensus 332 w~~~~~-~v~~-~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 332 WMMFAA-GVVV-ALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hhhhHH-HHHH-HhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 222221 2222 22333344445888888999999999999999999999999999988764
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.84 E-value=4.2e-11 Score=103.77 Aligned_cols=142 Identities=23% Similarity=0.265 Sum_probs=100.6
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.......++.++|+++.|+++||+|||+.+..+..+..++.++........+ .+.....-.+.+.+.+....
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~--------~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNN--------FWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccc--------cccccccccccccccccccc
Confidence 5667788899999999999999999999999999999998888755532211 23444444455555554444
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh---ccchhhHHHHhhHHHhhheeeecccC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS---SSGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
... .++.|..|++.|+...++.+....+|..++..+.....+.. .|........+..+..++...++||+
T Consensus 122 ~~~-~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 122 VSP-IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 554 99999999999999999999988888887777654443222 24444445554444445555677775
No 221
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=6.2e-08 Score=83.08 Aligned_cols=141 Identities=13% Similarity=0.026 Sum_probs=103.9
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.....+.++.+++.+.++.+.||++-.+.+....++..+..++... .++ ....++.-++.+.+-+.+++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---~~s--------~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---VHS--------FPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---Hhh--------hHHHHHHHHHHHHHhcccch
Confidence 7778889999999999999999999444444333333222222211 111 24445555566666666666
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh-------hhccchhhHHHHhhHHHhhheeeecccCCC
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS-------WSSSGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
+.. .++...|.+++|+.-+|+.++...+|+++|..+...+.+ .++.+.|.+-+++.++.+++.++++|+...
T Consensus 154 ~~~-~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 154 GVV-AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHH-HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 666 999999999999999999999999999999999887543 256678888999999999999898887544
No 222
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.83 E-value=3.6e-08 Score=83.01 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=101.0
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCC-ceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGR-RPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGF 263 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (350)
+......++..+++++.|+...|.++ |+.++.+.+++.++.++.......+++. .+..+++-. ..+.+.+.
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~------~y~mL~~R~--l~Gvg~~n 146 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGV------KYLMLVARI--LTGVGVGN 146 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccch------HHHHHHHHH--HcCcCccc
Confidence 77777889999999999999999886 8888999999999999985544443321 233333333 33444455
Q ss_pred cchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh--------------ccchhhHHHHhhHHHhhhee
Q 018767 264 GAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS--------------SSGTFFIYSAFSVITVLFVA 329 (350)
Q Consensus 264 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~~~~~~~~~ 329 (350)
....-.|+++..-.+.|.++.+..+....+|.++||.+...+...+ +..+.++.+.+.++..++..
T Consensus 147 ~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 147 FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 5666789999888888999999888888888888887765544211 12345666666666666666
Q ss_pred eecccC
Q 018767 330 KFVPET 335 (350)
Q Consensus 330 ~~~~~~ 335 (350)
++.+|.
T Consensus 227 ~~f~E~ 232 (488)
T KOG2325|consen 227 FFFKEV 232 (488)
T ss_pred hheeec
Confidence 666664
No 223
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.79 E-value=5.6e-08 Score=80.24 Aligned_cols=280 Identities=11% Similarity=0.077 Sum_probs=147.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc------hhhHHHhhchHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------PWRILALTGLVPC 75 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------~Wr~~f~~~~~~~ 75 (350)
+...+-+.-++-|++.+. ..+-.+|+--..|+++--++.+...++.-+|..++.++|..+ +.+..+++.....
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~ 171 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASV 171 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 455667778888888764 677778888888999989999999888888888888888765 5666777777666
Q ss_pred HHHHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHH-HHHHHHHhccCCCc-------chhhhhhcccchh
Q 018767 76 VLLLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAA-EIQVYILTLRSLPK-------ASIRDLFKSKYIR 147 (350)
Q Consensus 76 ~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 147 (350)
.++++..+++|..++-..-+++.++... .++...++.+..++.. +.++.....+...+ ..+++..++
T Consensus 172 ~~a~~~~~fLP~~~~S~~f~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~---- 246 (412)
T PF01770_consen 172 SLALLIALFLPMPKRSLFFHRKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSN---- 246 (412)
T ss_pred HHHHHHHHHcCCCCcccceeccCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcC----
Confidence 6677777778876542222111111000 0000000000000000 00000000000001 112223333
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch-----HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHH
Q 018767 148 SVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK-----LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTF 222 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~ 222 (350)
+.++.-.+.+.....++..+..|...+.++...++.. ..-+...+.+.++.+..|++..++.+-.-+.++..-..
T Consensus 247 ~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l 326 (412)
T PF01770_consen 247 PRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLL 326 (412)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHH
Confidence 2333344455555566777778888777776222211 55556666777778888888666665444443333222
Q ss_pred HHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHH
Q 018767 223 LGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWA 297 (350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 297 (350)
.+.+++.. ....+ .+.......++...+........ .-++.....+.-+...|++++...+-..+
T Consensus 327 ~a~~L~lm-~~t~~--------Iwv~Y~~yIif~~~y~fliTiA~-~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 327 QAGLLFLM-SFTGN--------IWVCYAGYIIFRSLYMFLITIAS-FQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHHHHHH-HHhhH--------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 22222211 11111 35555555556555555444343 33333334444577777777665544433
No 224
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=1.9e-07 Score=79.50 Aligned_cols=136 Identities=16% Similarity=0.148 Sum_probs=100.6
Q ss_pred HHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhh
Q 018767 190 YACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWV 269 (350)
Q Consensus 190 ~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (350)
.++..++.++..|.++||+|||..+........+......+.. ++..+ ..-..+++....... ++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-------------~~~~~-~~~l~g~~~~~~s~~-~a 135 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-------------YWFFL-LLGLSGGFSAIFSVG-FA 135 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-------------HHHhh-hcccccchhhhhhhh-hh
Confidence 4677888899999999999999999888877777666654332 22222 222233333333344 49
Q ss_pred hhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHHhhheeeecccCCCCCH
Q 018767 270 IMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPETKGKTL 340 (350)
Q Consensus 270 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (350)
+++|....+.|....|+.+.....+..++|.+.+.+.+. +....+.+.++...+..+...+++||+..++.
T Consensus 136 ~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 136 YVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred heeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 999999999999999999999999999999999998887 44556666666777777777788888755443
No 225
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.75 E-value=4.9e-08 Score=80.33 Aligned_cols=148 Identities=17% Similarity=0.033 Sum_probs=93.4
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.......++.++|+++.|++.||+|||++.-..+++++++.++.+.....++... ....+.+.-.+.+....+-.
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~-----~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLG-----VMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcc-----hhhHHHHHHHHhhccccCCC
Confidence 7778888999999999999999999999999999999988886655433333211 12223333333333333445
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHH---Hhh--h----------ccchhhHHHHhhHHHhhhee
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFL---MSW--S----------SSGTFFIYSAFSVITVLFVA 329 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~~~--~----------~~~~~~~~~~~~~~~~~~~~ 329 (350)
|+..+.++|....+.||.-.+.....+.+|...|..+.-.+ .+. . -|...+.++.+..+..+..-
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~R 242 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFR 242 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77778999999999998888777766666554444433222 222 1 12233444444444444444
Q ss_pred eecccCCC
Q 018767 330 KFVPETKG 337 (350)
Q Consensus 330 ~~~~~~~~ 337 (350)
+.+||+++
T Consensus 243 l~M~Et~~ 250 (538)
T KOG0252|consen 243 LKMPETAR 250 (538)
T ss_pred hcCCcchh
Confidence 56677654
No 226
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.71 E-value=1.6e-07 Score=80.44 Aligned_cols=150 Identities=12% Similarity=0.026 Sum_probs=80.4
Q ss_pred hhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCC-ceeehhhhHHHHHHHHHHHHHHHhcccccccCch
Q 018767 168 GFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGR-RPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWV 244 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
.+..+++.++.+.+..+ +......++.++++++.|+++||+|| |+.+.++.++..+........ ++
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~---~~-------- 91 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV---TT-------- 91 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh---cC--------
Confidence 44444455667888777 77888999999999999999999965 666666665554444443221 11
Q ss_pred hHHHHHHHHHHHHHHhhcccc---hhhhhhc----ccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHH
Q 018767 245 PVLAVGGILIYIAFFSIGFGA---VPWVIMS----EIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIY 317 (350)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 317 (350)
.+.......+.+......... ....+.. |......|.+..| .+|..++|.+.+.+.....+.++++.
T Consensus 92 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~f~~~ 165 (418)
T TIGR00889 92 PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQLYIT 165 (418)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHHHHHH
Confidence 122222222222222111111 1112221 2222223334433 36888888888877332223445555
Q ss_pred HHhhHHHhhheeeecccC
Q 018767 318 SAFSVITVLFVAKFVPET 335 (350)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~ 335 (350)
+++..+..++ .++.||+
T Consensus 166 ~~~~~~~~~~-~~~~~e~ 182 (418)
T TIGR00889 166 AGSSALLGVF-ALTLPDI 182 (418)
T ss_pred HHHHHHHHHH-HhcCCCC
Confidence 5555544443 3456665
No 227
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.68 E-value=2.9e-08 Score=70.98 Aligned_cols=86 Identities=22% Similarity=0.347 Sum_probs=72.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
+++.+.+.+++.|++.+...+....++.|..|+++|++..++......+|..+++.+.+.+ +|++.+++.++..++
T Consensus 50 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 50 NITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 5567788999999999999999999999999999999999999999999999998887766 899999887777666
Q ss_pred HHHH-HhccCC
Q 018767 78 LLVG-LCFVPE 87 (350)
Q Consensus 78 ~~~~-~~~~~e 87 (350)
..+. .+..||
T Consensus 130 ~~~~~~~~~~~ 140 (141)
T TIGR00880 130 AFILLAFLLPE 140 (141)
T ss_pred HHHHHhhcCCC
Confidence 5443 444555
No 228
>PRK09669 putative symporter YagG; Provisional
Probab=98.67 E-value=1.8e-07 Score=80.87 Aligned_cols=134 Identities=13% Similarity=0.033 Sum_probs=82.2
Q ss_pred hhhhHHHH-HHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc----cCCceeeh-hhhHHHHHHHHHHHHHHHhcccc
Q 018767 167 IGFYTSET-FVQAGLSSGK--LGTILYACVQVPITVVGAFLMDK----SGRRPLIM-ISAAGTFLGCFLAGTSFFLKGQN 238 (350)
Q Consensus 167 ~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~----~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
+..|++++ .+..|.+... ....+..+...+..++.|+++|| +|||+..+ .+.+...++..+. ...+..+
T Consensus 28 ~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~---f~~p~~~ 104 (444)
T PRK09669 28 VMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT---FYTPDFG 104 (444)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH---HhCCCCC
Confidence 34444444 4567888766 66777788899999999999998 67765544 4555555554433 1111110
Q ss_pred cccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccC-CcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 239 MFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIF-PINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
. ........+...++..++.....|.. ++..|+. ++++|.+..+.-.....+|+.+++.+...+.
T Consensus 105 -~-~~~~~~~~~~~~l~~~~~t~~~ip~~-al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 105 -A-TGKIIYACVTYILLSLVYTAINVPYC-AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred -c-chHHHHHHHHHHHHHHHHHhhcchHH-HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01112333333344445555455554 7888877 4567888888888888888888777655444
No 229
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.66 E-value=3.4e-07 Score=79.80 Aligned_cols=135 Identities=10% Similarity=-0.019 Sum_probs=81.7
Q ss_pred hhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhc----ccCCcee-ehhhhHHHHHHHHHHHHHHHhcc
Q 018767 165 NGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMD----KSGRRPL-IMISAAGTFLGCFLAGTSFFLKG 236 (350)
Q Consensus 165 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d----~~grr~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
.....|++.++. ..|.+... ....+.-+...+..++.|+++| |+|||+. ++.+...++++..++ ...+.
T Consensus 23 ~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll---f~~p~ 99 (473)
T PRK10429 23 GIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL---FSAHL 99 (473)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH---HcCCC
Confidence 344445555544 45887765 6677778888999999999999 5698555 445555555554443 11111
Q ss_pred cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccC-CcchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 237 QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIF-PINIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
.+ ..+......+...++..++.....|.. ++..|+. ++++|....+.-.....+|+.+.+.+...+
T Consensus 100 ~~--~~~~~~~~~~~~~l~~~~~t~~~ip~~-al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 100 FE--GTAQYVFVCVTYILWGMTYTIMDIPFW-SLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred CC--ccHHHHHHHHHHHHHHHHHHHHcchHH-hhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 001112233333444455555555655 8888987 578899988887777777766665554443
No 230
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.64 E-value=6.5e-08 Score=80.32 Aligned_cols=153 Identities=20% Similarity=0.088 Sum_probs=83.7
Q ss_pred hhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH--HHHHHHHHHhccccc
Q 018767 165 NGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG--CFLAGTSFFLKGQNM 239 (350)
Q Consensus 165 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 239 (350)
.....+.+..++ ..|++.++ .......+..++.+++.|.++||+|.||-++.......+. .............+
T Consensus 24 gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n- 102 (412)
T PF01306_consen 24 GIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSN- 102 (412)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-
T ss_pred HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 344444555555 48888877 7777888899999999999999999777655443332222 11111111110000
Q ss_pred ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCc---chhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhH
Q 018767 240 FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI---NIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFI 316 (350)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 316 (350)
...+..+.+...+..+.+.. . +.|.+-. +..+.-.|=....+.+|.+++..+.|.+.+.+++..+++
T Consensus 103 --------~~lg~iig~i~l~~~f~~~~-~-~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi 172 (412)
T PF01306_consen 103 --------FWLGAIIGGIYLGLVFNAGV-P-LSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWI 172 (412)
T ss_dssp ---------HHHHHHTTTTTTTTTTTHH-H-HHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHcccc-h-HHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHH
Confidence 11111222222233333322 1 2243322 123556677788899999999999999998777777776
Q ss_pred HHHhhHHHhhhe
Q 018767 317 YSAFSVITVLFV 328 (350)
Q Consensus 317 ~~~~~~~~~~~~ 328 (350)
......+..++.
T Consensus 173 ~s~~~~il~lll 184 (412)
T PF01306_consen 173 ASAAAIILLLLL 184 (412)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555544444433
No 231
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.59 E-value=4.8e-07 Score=77.92 Aligned_cols=160 Identities=17% Similarity=0.110 Sum_probs=100.8
Q ss_pred HHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhc----ccCCceeeh-hhhHHHHHHHHHHHHHHHhcccccccCc
Q 018767 171 TSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMD----KSGRRPLIM-ISAAGTFLGCFLAGTSFFLKGQNMFLDW 243 (350)
Q Consensus 171 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d----~~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (350)
.+++.+..+.++.. .......+...+..++.|.++| |+|||+..+ .+.....++..++.... +... ....
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~--p~~~-~~~~ 101 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPP--PAGL-SFTA 101 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccc--cchh-hhhh
Confidence 33444556888765 6666777888888999999999 789776655 56666666655553220 1000 0000
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-cchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-h-------ccchh
Q 018767 244 VPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-INIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-S-------SSGTF 314 (350)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~-------~~~~~ 314 (350)
......+...++..++.....|.. ++..|+.+ +++|....+.-.....+|..+...+.+.+.+. + +....
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~-al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYN-ALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchh-hcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 122334445555666666666665 88999987 46799999998888888887677776665543 1 22334
Q ss_pred hHHHHhhHHHhhheeeeccc
Q 018767 315 FIYSAFSVITVLFVAKFVPE 334 (350)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~ 334 (350)
.+.+++..+..++..+..||
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 45555555556666666777
No 232
>PRK11462 putative transporter; Provisional
Probab=98.48 E-value=3.6e-06 Score=73.01 Aligned_cols=136 Identities=11% Similarity=0.034 Sum_probs=86.6
Q ss_pred hhhhhHHHHH-HHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc----cCCceeeh-hhhHHHHHHHHHHHHHHHhccc
Q 018767 166 GIGFYTSETF-VQAGLSSGK--LGTILYACVQVPITVVGAFLMDK----SGRRPLIM-ISAAGTFLGCFLAGTSFFLKGQ 237 (350)
Q Consensus 166 ~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~----~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
....|+.+++ +..|.+... ....+.-+...+.-++.|+++|| +|||+..+ ++.+.++++.+++ ...+..
T Consensus 27 ~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll---f~~p~~ 103 (460)
T PRK11462 27 NVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA---YSTPDL 103 (460)
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH---HhCCCC
Confidence 3344454444 446777655 66677778888999999999996 68776655 4555665555443 222211
Q ss_pred ccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-cchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 238 NMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-INIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
+ . ........+...++..++.....|-. ++..|+.+ +++|++..+.-.....+|..+++.+...+.+
T Consensus 104 s-~-~~~~~y~~~~~~~~~~~~t~~~ipy~-al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 104 S-M-NGKMIYAAITYTLLTLLYTVVNIPYC-ALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN 171 (460)
T ss_pred C-c-chHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 11122334444445556666666665 88888876 6789999999999999988888777655544
No 233
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.48 E-value=1.3e-05 Score=64.73 Aligned_cols=154 Identities=18% Similarity=0.139 Sum_probs=87.5
Q ss_pred HHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHH
Q 018767 173 ETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVG 250 (350)
Q Consensus 173 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (350)
.+++++|++..+ ...........+...+.|.++||+|||+..+...++..++++.- ..++ ....++
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k----~~~~--------~~~L~~ 126 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK----HSSN--------YPVLLL 126 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH----hccc--------cHHHHH
Confidence 455778888877 66666677788888999999999999999888777777776543 2111 233344
Q ss_pred HHHHHHHHHhhcccchhhhhhcc----cCCcchhhhHhHHHH-HHHHHHHHHHHHHhHHHHhh---hccchhhHHHHhhH
Q 018767 251 GILIYIAFFSIGFGAVPWVIMSE----IFPINIKGVAGSLVV-LVNWSGAWAVSYTFNFLMSW---SSSGTFFIYSAFSV 322 (350)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~e----~~p~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~ 322 (350)
.-.+.+.....-..+.-.=++.| -+|++..+...+... ..+.+-++.+..+...+.+. +...+|.....+..
T Consensus 127 GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~ 206 (354)
T PF05631_consen 127 GRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLA 206 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 44444433333333222112333 345554455555444 22334445555555555554 22345555555555
Q ss_pred HHhhheeeecccCCCC
Q 018767 323 ITVLFVAKFVPETKGK 338 (350)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (350)
++.++.....+|..+.
T Consensus 207 ~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 207 VAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHhcccccCCC
Confidence 5555555555665443
No 234
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.44 E-value=1.4e-05 Score=67.47 Aligned_cols=133 Identities=20% Similarity=0.042 Sum_probs=86.3
Q ss_pred hhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchh
Q 018767 168 GFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVP 245 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (350)
...+..+....|+++.. ..-....+.++.+.++..++.+|+|..+.-..+......+..+.......+..+. .....
T Consensus 278 ~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~-~~~s~ 356 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF-SSISA 356 (432)
T ss_pred cHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc-hhhHH
Confidence 33444455666888765 5666777888999999999999999888888777766666555555444443220 01111
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
...+.+....-.+.-..--... .++.|..|+++||+..|+-+..+++...+.-.+.
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~-qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVT-QIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHH-HhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222233332223322233444 7888999999999999999999988876654443
No 235
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=9.7e-07 Score=70.91 Aligned_cols=152 Identities=17% Similarity=0.001 Sum_probs=96.8
Q ss_pred HHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHH
Q 018767 171 TSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLA 248 (350)
Q Consensus 171 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (350)
.|..-..-+.+..+ +.......+..+++..+|.+.|++|||+...+......+...+-+.. + ...
T Consensus 101 ~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~s----p---------nf~ 167 (528)
T KOG0253|consen 101 LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGAS----P---------NFA 167 (528)
T ss_pred HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCC----C---------Cee
Confidence 33333334444444 66667778889999999999999999999887766655544443221 1 111
Q ss_pred HHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhccchhhHHHHhhHHHhhhe
Q 018767 249 VGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSSSGTFFIYSAFSVITVLFV 328 (350)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (350)
.++.+-...+++.+..|...++-.|..|..+|..-+-+. ....+|.++...+.-.+..+.++...+.............
T Consensus 168 ~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f 246 (528)
T KOG0253|consen 168 SLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF 246 (528)
T ss_pred hhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH
Confidence 222222233344444666668888999999888776666 7788888888887766666655555555444544444555
Q ss_pred eeecccCC
Q 018767 329 AKFVPETK 336 (350)
Q Consensus 329 ~~~~~~~~ 336 (350)
+++.+|..
T Consensus 247 ~~w~~ESp 254 (528)
T KOG0253|consen 247 LVWVYESP 254 (528)
T ss_pred HhhcccCc
Confidence 56677753
No 236
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.39 E-value=9.7e-07 Score=74.34 Aligned_cols=141 Identities=14% Similarity=0.136 Sum_probs=102.9
Q ss_pred HHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHH
Q 018767 174 TFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGG 251 (350)
Q Consensus 174 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (350)
.+++.+..+.. ...+....+.++.-++.+++.+|+|+-+++..++.+..+=.+.+ ....+ +|..+..
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~---S~L~n--------~W~vLPi 465 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYY---SYLQN--------PWMVLPI 465 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHH---HHhcC--------chheeeH
Confidence 44555533322 55666677888888999999999999999998887776665555 33332 4666666
Q ss_pred HHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHH-HHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHHhh
Q 018767 252 ILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLV-NWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 326 (350)
-.+-+...+..+..+. +|++...|++.|.++.++.... ..+|-.+|.+++|.+.++ +....|.++++.+++..+
T Consensus 466 eilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 466 EILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 6666777777777777 9999999999999999998766 567888999999998887 444455555555554443
No 237
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.32 E-value=7e-06 Score=71.34 Aligned_cols=175 Identities=15% Similarity=-0.006 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhH-HHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC-----Cceeehhhh
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYT-SETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSG-----RRPLIMISA 218 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g-----rr~~~~~~~ 218 (350)
+.....+...++..... ....... +.+.++.|.+..+ .......+...+ .+++|.++||++ ||+.++++.
T Consensus 25 ~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~ 102 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSG 102 (468)
T ss_pred chHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHH
Confidence 33333333333444333 3333333 4444567988876 333444444454 556999999996 555566555
Q ss_pred HHHH-HHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhH---hHHHHHHHHHH
Q 018767 219 AGTF-LGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVA---GSLVVLVNWSG 294 (350)
Q Consensus 219 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~---~~~~~~~~~~g 294 (350)
++.. +....+ .. .++. .........+...+.+...... -++..|..+ +.+... .+.......+|
T Consensus 103 ~l~~~~~~~~l---~~-~~~~------~~~~~~~~~l~~~~~a~~dv~~-da~~~e~~~-~~~~~~~~~~s~~~~~~~~G 170 (468)
T TIGR00788 103 LLGSAILYGLL---PG-KVSS------AKVAAAFIFLAALAKALYDVLV-DSLYSERIR-ESPSAGPSLVSWMWGASATG 170 (468)
T ss_pred HHHHHHHHHhc---cc-ccch------HHHHHHHHHHHHHHHHHHHHhH-HHHHhhhhh-cCCCcCCCeeeHHHHHHHHH
Confidence 4432 221111 11 1110 1222222333333333333334 488889888 444433 33444445689
Q ss_pred HHHHHHHhHHHHhh-hccchhhHHHHhhHHHhhheeeecccCC
Q 018767 295 AWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVLFVAKFVPETK 336 (350)
Q Consensus 295 ~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (350)
..+++.+.|.+.+. ++...+.+.+++..+. .+...+.+|++
T Consensus 171 ~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 171 GLISSLLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHHHHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccc
Confidence 99999999999887 4455555665555555 33445567653
No 238
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.30 E-value=1.8e-05 Score=63.12 Aligned_cols=276 Identities=10% Similarity=0.126 Sum_probs=148.4
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc------hhhHHHhhchHHHHH
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII------PWRILALTGLVPCVL 77 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~------~Wr~~f~~~~~~~~~ 77 (350)
+.+-+.-++-|...+ ....-++|+-+..+|+++-++.+...+..-.|...|..++..+ +.+..-.+......+
T Consensus 96 ~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~i 174 (433)
T KOG3810|consen 96 KAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTI 174 (433)
T ss_pred hheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHH
Confidence 334444556666544 4466778888889999999999999888888888888777765 344455565555666
Q ss_pred HHHHHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchhHHHHHHHHHH
Q 018767 78 LLVGLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMV 157 (350)
Q Consensus 78 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
+.+...++|..+|-+..+.+.++ ....+.+..+.+ .+..+ ..+..-..-..++.+..+++. ++.-.+.+
T Consensus 175 a~~~A~fLP~v~rSl~f~~~~~~--~~v~~~e~~~~~--~~~~~---~l~~~~~~l~~~l~~~y~np~----ll~WSlWw 243 (433)
T KOG3810|consen 175 AVLLALFLPRVKRSLYFHRLEDK--ISVGDLEEMNPQ--ASYMS---YLRGAFVLLWRDLQECYSNPR----LLKWSLWW 243 (433)
T ss_pred HHHHHhhCCCCchhhhhhccccc--ceeccchhcCcc--chhhH---HHHHHHHHHHHHHHHHhcCch----hhhhHHHH
Confidence 67777788876654333322221 111111110000 00000 000000000112333344432 22223344
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCch----HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHH
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGK----LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFF 233 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
.....+++-+..|...+-++..-++.. ..=++..+.+.++.+..|.+.-++.|..-++++..-...+..++. .
T Consensus 244 Al~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~---m 320 (433)
T KOG3810|consen 244 ALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFI---M 320 (433)
T ss_pred HHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhh---h
Confidence 444455667777887777776422222 344556667777888889887777666444333322222222221 1
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHH
Q 018767 234 LKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYT 301 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 301 (350)
..+++ .|.......++...+........ .-+++....+.-|..+|+++++.-+-..+-..+
T Consensus 321 ~~t~~------Iw~~Ya~yvlfr~~y~l~itiA~-~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i 381 (433)
T KOG3810|consen 321 AQTQH------IWVCYAGYVLFRVIYQLTITIAT-FQIARNLSSELFGLVFGINTFVALILQSILTLI 381 (433)
T ss_pred hcccc------eehhhhhHHHHHhhHhhhhhHHH-HHHHHhhhhhhheeeeehHHHHHHHHHHhheEE
Confidence 11111 45556666666666666555444 334444455666888999888766665554443
No 239
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.22 E-value=3.1e-05 Score=62.41 Aligned_cols=149 Identities=19% Similarity=0.130 Sum_probs=108.8
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL 241 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
...+...++.+.++.+.+.+. ..+.+..++....+++..++.+|+|.++.+..+.++.+++.++=... +
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~----~----- 98 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG----G----- 98 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----c-----
Confidence 345566667778888888776 77778888888889999999999999999998888877776663221 1
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhhh--ccchhhHHHH
Q 018767 242 DWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWS--SSGTFFIYSA 319 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~ 319 (350)
....+....+.+.+.+.+..-++ ..+-+.||++ -+..+|++.+...+++.+++.+...+.++. +.......+.
T Consensus 99 ---~~~L~~gt~l~G~gIav~nVLLP-slIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 99 ---LPLLFLGTLLAGAGIAVINVLLP-SLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred ---HHHHHHHHHHHHhhHHHHHHhhh-HHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 24444445555555555444455 7888899876 599999999999999999999999888774 3445555555
Q ss_pred hhHHHhh
Q 018767 320 FSVITVL 326 (350)
Q Consensus 320 ~~~~~~~ 326 (350)
.+.+..+
T Consensus 174 ~allAl~ 180 (395)
T COG2807 174 LALLALL 180 (395)
T ss_pred HHHHHHH
Confidence 5555444
No 240
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.14 E-value=6.4e-05 Score=62.54 Aligned_cols=60 Identities=12% Similarity=-0.112 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
+..+...+.-+...+..+.... ..+.|..|+++|..++|.....-.+|..++..+.-.+.
T Consensus 336 ~ivf~lif~eGLlGGa~YVNtF-~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 336 WIVFVLIFYEGLLGGASYVNTF-YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHhhhHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3333333344444444444444 66677789999999999999998888888877765543
No 241
>PRK09848 glucuronide transporter; Provisional
Probab=98.14 E-value=9.6e-05 Score=64.23 Aligned_cols=126 Identities=10% Similarity=-0.069 Sum_probs=65.7
Q ss_pred HHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhccc----CCceee-hhhhHHHHHHHHHHHHHHHhcccccccCchh
Q 018767 173 ETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKS----GRRPLI-MISAAGTFLGCFLAGTSFFLKGQNMFLDWVP 245 (350)
Q Consensus 173 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~----grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (350)
++.+..|.+... ....+..+...+..++.|+++||. |||+.. ..+.+...+...++.. .+.... .....
T Consensus 34 y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~ 109 (448)
T PRK09848 34 YYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFW---VPTDWS-HSSKV 109 (448)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHh---CcCCCC-cchHH
Confidence 333445777665 777788889999999999999996 666654 4444444333333211 111000 00001
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCc-chhhhHhHHHHHHHH-----HHHHHHHHHhH
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI-NIKGVAGSLVVLVNW-----SGAWAVSYTFN 303 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~-----~g~~~~~~~~~ 303 (350)
........+...+++....+.. ++..|+.+. ++|....+.-..... ++..++|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~-al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 110 VYAYLTYMGLGLCYSLVNIPYG-SLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHHHHHHHHHHHHhcccHh-hhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333344444555554554 555665543 567766555443323 34444555443
No 242
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.13 E-value=6e-05 Score=67.63 Aligned_cols=132 Identities=12% Similarity=0.030 Sum_probs=84.9
Q ss_pred HHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHH
Q 018767 173 ETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAV 249 (350)
Q Consensus 173 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (350)
++.+..+.+... ..........-+..+++|+++|+ +||++.+.++.++..++..++.+........ .......+
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~---~~~~~~~l 89 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH---PLHDLLDL 89 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc---chHHHHHH
Confidence 334445666554 33333444445567788999996 7999999999998888887775432111100 01112234
Q ss_pred HHHHHHHHHHhhcccchhhhhhcccCCcc---hhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 250 GGILIYIAFFSIGFGAVPWVIMSEIFPIN---IKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
.++.+..++.+..-+++. +...|.++++ .|.....+.+...++|+.+++.+.+++.+.
T Consensus 90 ~gLaLia~G~GgiKp~vs-af~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~ 150 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVS-AFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGD 150 (654)
T ss_pred HHHHHHHhhccccccCch-hhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444445554445555 8888888754 367788888999999999999999988743
No 243
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.10 E-value=8.8e-05 Score=63.40 Aligned_cols=116 Identities=11% Similarity=-0.043 Sum_probs=58.9
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCc-eeehhhhHHHHHHHHHHHHHHHhcccccc-cCchhHHHHHHHHHHHHHHhhc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRR-PLIMISAAGTFLGCFLAGTSFFLKGQNMF-LDWVPVLAVGGILIYIAFFSIG 262 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 262 (350)
.....+.++..+|..+..+.. .-++| +.+.+..+.=.+..-++.+....+..... .-...+..++...+++...+..
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 667778888999888665432 11222 13333222222222222221111100000 0001233333344444333333
Q ss_pred ccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 263 FGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 263 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
.+....+..+..++++|..+..+...+-.+|-.+|..+.
T Consensus 390 -~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 390 -GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred -HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333447778888888898888888888888887777664
No 244
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.09 E-value=2.3e-05 Score=66.33 Aligned_cols=124 Identities=12% Similarity=0.043 Sum_probs=73.2
Q ss_pred chhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccC-CceeehhhhHHHHHHHHHHHHHHHhcccccc
Q 018767 164 INGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSG-RRPLIMISAAGTFLGCFLAGTSFFLKGQNMF 240 (350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g-rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
......|.+.++++.|++..+ ...+...+..+++.+++|.++||.+ +|+.+.+..++..+..... ....+
T Consensus 18 ~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~---~~~~~---- 90 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL---AFSSS---- 90 (400)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH---HHhcc----
Confidence 344556778888999998877 7788888999999999999999986 4555555444444433332 21111
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHH
Q 018767 241 LDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYT 301 (350)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 301 (350)
.+..+....++..++ ....|..-++..+... .++.-.|-....+.+|-.++...
T Consensus 91 ----f~~~~~~~~l~~~~~-~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 91 ----FWWLFVIMLLFSFFF-SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred ----HHHHHHHHHHHHHHH-ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 233333333333332 2233444455555443 24555566666666666665443
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.97 E-value=9e-05 Score=61.12 Aligned_cols=112 Identities=16% Similarity=0.115 Sum_probs=72.4
Q ss_pred hHHhhHhhhhcccC-----Cceeehh-hhHHHHHHHHHHHHHHHhccc----ccccCchh-HHHHHHHHHHHHHHhhccc
Q 018767 196 PITVVGAFLMDKSG-----RRPLIMI-SAAGTFLGCFLAGTSFFLKGQ----NMFLDWVP-VLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 196 ~~~~~~g~l~d~~g-----rr~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (350)
+..+..|+.+|+.+ ||...+. +...+..+..+.......-.. .....+.. ......+.+++.+......
T Consensus 29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 46888999999988 7765544 455555544444443332222 11111111 1222333344444444444
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
+.. +++.|..|+++|+++.++.....-+|.+++..+.+.+.+.
T Consensus 109 ~~l-ALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~ 151 (403)
T PF03209_consen 109 SFL-ALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP 151 (403)
T ss_pred HHH-HHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 554 8999999999999999999999999999999999988765
No 246
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.93 E-value=9e-05 Score=63.68 Aligned_cols=154 Identities=18% Similarity=0.159 Sum_probs=86.8
Q ss_pred HHHHHHhCCCCchH-HHHHHHHHhhhHHhhHhhhhccc-----CCceeehhhhHHHHHHHHHHHHHHHhcccccccCchh
Q 018767 172 SETFVQAGLSSGKL-GTILYACVQVPITVVGAFLMDKS-----GRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVP 245 (350)
Q Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (350)
+++.++++.++.+. ........--...++.|.++|-+ .||+.++++.++..++...++.......+ .
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s-------~ 86 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESS-------A 86 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccch-------h
Confidence 44556788887662 11112222234578899999986 24555556665555544444332211110 1
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccC---CcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhh
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIF---PINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFS 321 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 321 (350)
.......++...+....-...- +.+.|.. |.+ |+...+....+..+|+.++..+.|.+.+. +....+.+.+.+.
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aD-a~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAAD-ALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALP 164 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhh-HHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHH
Confidence 2222222333333333333333 5666654 333 77888888899999999999999998887 4455566666565
Q ss_pred HHHhhheeeeccc
Q 018767 322 VITVLFVAKFVPE 334 (350)
Q Consensus 322 ~~~~~~~~~~~~~ 334 (350)
.+..+...+..+|
T Consensus 165 ~l~~~~~~~~~~e 177 (433)
T PF03092_consen 165 LLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHhhhh
Confidence 5555555455554
No 247
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.92 E-value=0.00043 Score=60.05 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHH-HHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTF-LGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGF 263 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (350)
....+..+...+..++.|.++|+-++||.++....... ++...+.+ ..+++ .+...+...+...++....
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~---v~~~~------~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF---VSPGQ------WWLALVLFIIANVGYEASN 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hCcch------HHHHHHHHHHHHHHHHHHH
Confidence 34556677777888899999999988877665444433 33333322 22221 2333333333344444443
Q ss_pred cchhhhhhcccCCcchh--------------------------hhHhHHHHHHHHHHHHHHHHHhHHHHhh-hc------
Q 018767 264 GAVPWVIMSEIFPINIK--------------------------GVAGSLVVLVNWSGAWAVSYTFNFLMSW-SS------ 310 (350)
Q Consensus 264 ~~~~~~~~~e~~p~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~------ 310 (350)
... .++..|+.+++.+ ++..+.-...+++|+.+.-.+.-.+... +.
T Consensus 145 vfy-na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~ 223 (477)
T PF11700_consen 145 VFY-NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTW 223 (477)
T ss_pred HHH-HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccch
Confidence 333 4889999988888 8999999999999998877765444322 11
Q ss_pred --cchhhHHHHhhHHHhhheeeecccCCC
Q 018767 311 --SGTFFIYSAFSVITVLFVAKFVPETKG 337 (350)
Q Consensus 311 --~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (350)
...+.+.++.-++.++...+++|++++
T Consensus 224 ~~r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 224 AIRVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 112333333334445555566676644
No 248
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.92 E-value=2.6e-05 Score=48.53 Aligned_cols=60 Identities=20% Similarity=0.313 Sum_probs=48.6
Q ss_pred HhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhH
Q 018767 160 QFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAA 219 (350)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~ 219 (350)
.+.....+..|.+.+.++.|++..+ ....+..+..+++.+++|.++||+++++.......
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3334566777888888889999877 77788889999999999999999999987765543
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.91 E-value=9.9e-05 Score=61.35 Aligned_cols=118 Identities=20% Similarity=0.186 Sum_probs=79.5
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhH--HHHHHHHHHHHHHhhc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPV--LAVGGILIYIAFFSIG 262 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 262 (350)
+...++.+..++..+.+-|+.||+|-|....++.....++..+=.......-++. .+ ....+-.+.......
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~-----f~~~l~~~Gq~iaa~Aq~F- 156 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPL-----FRRPLTHTGQSIAAAAQPF- 156 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcccccc-----chhhhhHHhHHHHHHhhhH-
Confidence 8888899999999999999999999999999999888888777544332211110 12 222222222222111
Q ss_pred ccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 263 FGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 263 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
...++.-...--+|+++|+++..+..+.+.+|.+++-.+.+.+..+
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 1122213344568999999999999999999998888777766544
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.90 E-value=0.00047 Score=49.57 Aligned_cols=109 Identities=6% Similarity=-0.077 Sum_probs=81.2
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
....+......+++++.+.+.+++|.|+.++++.+...+-..... .++ .+..+....+.+.+.+..+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~----~~~--------~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF----YPN--------SYTLYPASALLGFGAALLWT 108 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----hhh--------HHHHHHHHHHHhhhhHHhhH
Confidence 566667777778888899999999999999988887776554432 111 34555556666667777776
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
+.. .++.+...++.+++..++.-.....+.++|..+.-.+.
T Consensus 109 aqg-~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 109 AQG-TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hhh-HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666 88889888899999999988888888888777665443
No 251
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.87 E-value=0.00053 Score=52.94 Aligned_cols=51 Identities=14% Similarity=0.188 Sum_probs=34.6
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHh--cC-Cc------hhhHHHhhchHHHHHHHHHHhcc
Q 018767 35 NLRGLLTTLNQLLIVTGSSVAYII--GS-II------PWRILALTGLVPCVLLLVGLCFV 85 (350)
Q Consensus 35 ~~r~~~~~~~~~~~~~G~~~~~~~--~~-~~------~Wr~~f~~~~~~~~~~~~~~~~~ 85 (350)
++|+..+.+...+.++|.++.... -. -. .|++++.+.+++.++-++++..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777788888888776432 22 11 79999988887776655544433
No 252
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.78 E-value=0.00037 Score=59.22 Aligned_cols=165 Identities=16% Similarity=0.084 Sum_probs=101.3
Q ss_pred hhhhhhHHHHHH-HhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc----cCCceee-hhhhHHHHHHHHHHHHHHHhcc
Q 018767 165 NGIGFYTSETFV-QAGLSSGK--LGTILYACVQVPITVVGAFLMDK----SGRRPLI-MISAAGTFLGCFLAGTSFFLKG 236 (350)
Q Consensus 165 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~----~grr~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
.....|+.+++. ..|.+... ...++.-+...+.-++.|.++|| +||+|.. +.+.+..++...++.. .++
T Consensus 29 ~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~---~p~ 105 (467)
T COG2211 29 GIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFI---TPD 105 (467)
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHc---CCC
Confidence 344555555554 46777655 66667778888999999999996 5766654 4444555554444422 111
Q ss_pred cccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCC-cchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hc----
Q 018767 237 QNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFP-INIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SS---- 310 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~---- 310 (350)
.+ . ........+...++..++.....|-. ++..|+.+ +++|.+..+.=.....+|..+...+.+.+... +.
T Consensus 106 ~~-~-~~k~~ya~vtY~l~~l~YT~vniPy~-al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~ 182 (467)
T COG2211 106 FS-M-TGKLIYALVTYMLLGLGYTLVNIPYG-ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKA 182 (467)
T ss_pred cc-c-CcchHHHHHHHHHHHHHHHheeCchh-hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 00 0 01134455556667777777777776 78888764 46789999998888899988888877777654 11
Q ss_pred ---cchhhHHHHhhHHHhhheeeecccC
Q 018767 311 ---SGTFFIYSAFSVITVLFVAKFVPET 335 (350)
Q Consensus 311 ---~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (350)
.....+++++..+..+++++-.+|+
T Consensus 183 ~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 183 LGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1223344444444444455555554
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.56 E-value=0.0054 Score=51.91 Aligned_cols=82 Identities=15% Similarity=0.010 Sum_probs=69.5
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccCcc---chhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHH
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRN---LRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCV 76 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~ 76 (350)
..+.++-++.++|.|+.=|....+.+|.++++ +|.+...++..+.++|..++..+..++ +|.+.|.++++..+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 56788899999999999999999999999866 466778888999999999999998887 79999999888877
Q ss_pred HHHHHHhcc
Q 018767 77 LLLVGLCFV 85 (350)
Q Consensus 77 ~~~~~~~~~ 85 (350)
++++.+..-
T Consensus 114 ~~~~~f~~~ 122 (372)
T PF00854_consen 114 LALIVFLSG 122 (372)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHhC
Confidence 776665543
No 254
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.53 E-value=0.0014 Score=53.41 Aligned_cols=172 Identities=10% Similarity=-0.060 Sum_probs=93.6
Q ss_pred CCceehhhhHhhhhhccccccchhhhhh-hccc----CccchhhHHhHHH-HHHHHHHHHHHHhcCCc----h--hhHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFI-AEIA----PRNLRGLLTTLNQ-LLIVTGSSVAYIIGSII----P--WRILA 68 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~~~~~~~~~~----~--Wr~~f 68 (350)
+|++.++++|++.|++.+..+.+--++. .|+- |++..+...+... ...++-.+++.+++..+ + -..+|
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF 198 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPF 198 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchH
Confidence 5788999999999999999988877765 4442 2233333333222 22233334444444433 2 36788
Q ss_pred hhchHHHHHHHH-HHhccCCChHHHHHhCChHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCCcchhhhhhcccchh
Q 018767 69 LTGLVPCVLLLV-GLCFVPESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIR 147 (350)
Q Consensus 69 ~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (350)
....+..+++.+ +....+|.+.- ..+..+ ..+ .-+..++.+.++ +
T Consensus 199 ~~a~~~l~~~~~~I~~~W~ENyg~---~~~~~~-----------------~~~-----------~~~~a~~~i~~d---~ 244 (354)
T PF05631_consen 199 DAAIVLLAVAAVLILKTWPENYGD---TSSSSS-----------------LSG-----------SFREAWRAILSD---P 244 (354)
T ss_pred HHHHHHHHHHHHHHHhcccccCCC---cccccc-----------------hHH-----------HHHHHHHHHHcC---c
Confidence 887777766443 34445665410 000000 000 001123334443 3
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch-HHHHHHHHHhhhHHhhHhhhhcc
Q 018767 148 SVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK-LGTILYACVQVPITVVGAFLMDK 207 (350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~ 207 (350)
+.+.......+.....+..+..|.|.+.. .+-+.+. ....-+.++.++|+.+..++..+
T Consensus 245 ril~LG~~qslFE~smy~FVflWtPaL~~-~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 245 RILLLGLIQSLFEGSMYLFVFLWTPALDP-DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred hhHHHHHHHHHHHHHHHHheeeeeceecC-CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44444555556566656667777787651 1111122 77777788888898888665544
No 255
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=97.50 E-value=2.3e-05 Score=64.01 Aligned_cols=117 Identities=10% Similarity=-0.076 Sum_probs=2.0
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccc--cCchhHHHHHHHHHHHHHHhhc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMF--LDWVPVLAVGGILIYIAFFSIG 262 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 262 (350)
.....+.++..+|..+.++..-+..+++.+.+..+.=.+..-++......+..... .-...+..++...+++... .-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TN-Gy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTN-GY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHcc-ch
Confidence 34667889999999988764322113333333222222222222111111110000 0000122233333333222 22
Q ss_pred ccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHh
Q 018767 263 FGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTF 302 (350)
Q Consensus 263 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~ 302 (350)
..+....+..+..+++.|..+..+...+-.+|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344457788888888888887777777777777776554
No 256
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.44 E-value=0.0055 Score=52.85 Aligned_cols=113 Identities=9% Similarity=0.017 Sum_probs=75.8
Q ss_pred hhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC-------------ch------hHHHHHHHHHH
Q 018767 195 VPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD-------------WV------PVLAVGGILIY 255 (350)
Q Consensus 195 ~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~------~~~~~~~~~~~ 255 (350)
++..++.+++++|++|++.+......+.....+++.......+....+ .. ..+......+.
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~ 137 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVM 137 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHH
Confidence 333678899999999999988877777777777666544322210000 00 01111122222
Q ss_pred HHHHhhcccc-hhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 256 IAFFSIGFGA-VPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 256 ~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
.-.++....+ +.|.+++|.+..++..+-.++....+++|..+++.+..++.+
T Consensus 138 ~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 138 AELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333 778999999999999999999999999999999999888763
No 257
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.34 E-value=0.055 Score=46.89 Aligned_cols=40 Identities=10% Similarity=-0.150 Sum_probs=35.4
Q ss_pred hhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 23 VVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 23 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
.-..++.|.++.+|-.|..+++..+.++|.++++.+..++
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567889999999999999999999999999999776654
No 258
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.32 E-value=0.0067 Score=47.27 Aligned_cols=131 Identities=8% Similarity=0.022 Sum_probs=71.2
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhhHhhhhcccCCc--eeehhhhHHHHHHHHHHHHH
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVVGAFLMDKSGRR--PLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr--~~~~~~~~~~~~~~~~~~~~ 231 (350)
.+........+..+..|.|.+-.+-.--+......-+.++.++|+-+..++..|-..| ..+.+..........+....
T Consensus 255 ~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt 334 (454)
T KOG4332|consen 255 AIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILT 334 (454)
T ss_pred HHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444555555432111111112666777788888888887776654332 34444444444443333332
Q ss_pred HHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHH
Q 018767 232 FFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVL 289 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 289 (350)
....+.. -.+..-+++.+.+-...+..+.++. -+-.+..|.+.|++.+-+...
T Consensus 335 ~~vsP~k----es~~~s~i~F~~~E~cvGlfwPSim-kmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 335 SSVSPSK----ESPSESLIGFCLFEACVGLFWPSIM-KMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred hccCCCc----CCchHHHHHHHHHHHHHhhcchHHH-HHHHhhCCHHHHhhhhhheec
Confidence 2222221 1134456777777777777777776 777888899888877655443
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.22 E-value=0.0058 Score=52.07 Aligned_cols=48 Identities=8% Similarity=0.041 Sum_probs=35.2
Q ss_pred hccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 15 YGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 15 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
+-++..-.+.-.+.-....+++++.+......+.+.|..++..+--.+
T Consensus 130 fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 130 FLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred HHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 334445556666777778889999999988888888888887654433
No 260
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.16 E-value=5.7e-05 Score=66.40 Aligned_cols=149 Identities=15% Similarity=0.062 Sum_probs=0.8
Q ss_pred HHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhc
Q 018767 158 LQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLK 235 (350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
+.+...........+.+-+.+++++.+ ......-++..+..++..++.+|..|-+.+-.+.++++++.+++++..+..
T Consensus 13 ~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 13 LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 333333444455556677778888776 777778888898989999999998888888899999999998887765432
Q ss_pred cccccc-----------------------------------CchhHHHHHHHHHHHHHHhhc---ccchhhhhhcccCCc
Q 018767 236 GQNMFL-----------------------------------DWVPVLAVGGILIYIAFFSIG---FGAVPWVIMSEIFPI 277 (350)
Q Consensus 236 ~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~e~~p~ 277 (350)
+..... ..........+.+.....+.+ ..++..+|+-|..++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 211000 000011111122222222222 335556899999999
Q ss_pred chhhhHhHHHHHHHHHHHHHHHHHhHHHH
Q 018767 278 NIKGVAGSLVVLVNWSGAWAVSYTFNFLM 306 (350)
Q Consensus 278 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 306 (350)
+..+...|+.+....+|.++|-.+++...
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp -----------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 99899999999999988888877776543
No 261
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.12 E-value=0.0012 Score=55.35 Aligned_cols=156 Identities=15% Similarity=0.034 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc----cCCceeehhhh-H
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDK----SGRRPLIMISA-A 219 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~----~grr~~~~~~~-~ 219 (350)
+..+....+....++. +..-..|.+.+.++.|.+... ......-+.+++.+++.|..+|| +||||..+... .
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 4444444455555544 333345566666778877654 33334456677788999999996 78888776544 4
Q ss_pred HHHHHHHHHHHHHHhcc---ccc---ccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhh-HhHHHHHHHH
Q 018767 220 GTFLGCFLAGTSFFLKG---QNM---FLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGV-AGSLVVLVNW 292 (350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~-~~~~~~~~~~ 292 (350)
...++.++++....... ++. .........++.+.+..........|.= ++..|+..++.+.+ +.+....+..
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r-a~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR-ALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH-HHHHHhccChhhhhccchhHHHHHH
Confidence 44555555544332211 111 1111223344455555555556666776 89999988777777 9999999999
Q ss_pred HHHHHHHHHhHH
Q 018767 293 SGAWAVSYTFNF 304 (350)
Q Consensus 293 ~g~~~~~~~~~~ 304 (350)
+|+.+|-.+.++
T Consensus 190 vGnvLGY~~g~y 201 (498)
T KOG0637|consen 190 VGNVLGYALGSY 201 (498)
T ss_pred hcceeeeecccc
Confidence 999888777653
No 262
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.12 E-value=0.012 Score=49.48 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=80.4
Q ss_pred hhhhHHHHHHH-hCCCCchHH---HHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 167 IGFYTSETFVQ-AGLSSGKLG---TILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 167 ~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
-++..|++.+. .+++..+.. .=...-..+...+....+.|..+.|++++++.+...+...++.+. .
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~---~------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG---T------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH---C-------
Confidence 34455555554 777776622 222233445556677889999999999999888777766665332 1
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
....+-..-++-+.... .-...++++-...|+++--++++.......+|.+++..++..+...
T Consensus 93 --sv~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 93 --SVLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred --cHHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222222222211111 1233347777777888888899999999888888888888777664
No 263
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.0021 Score=53.89 Aligned_cols=54 Identities=11% Similarity=0.241 Sum_probs=44.3
Q ss_pred hhccccccchhhhhhhcccCccchhh-HHhHHHHHHHHHHHHHHHhcCCchhhHH
Q 018767 14 GYGIGVFSYVVPIFIAEIAPRNLRGL-LTTLNQLLIVTGSSVAYIIGSIIPWRIL 67 (350)
Q Consensus 14 G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~~~~~~~~~~Wr~~ 67 (350)
=++.-.....+-+++.|...++++.+ +.+++....++|..+|..++.+.+|+-.
T Consensus 153 D~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~ 207 (498)
T KOG0637|consen 153 DVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKI 207 (498)
T ss_pred HhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceEE
Confidence 34444566678899999998777777 9999999999999999999999888743
No 264
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.01 E-value=0.02 Score=46.75 Aligned_cols=132 Identities=22% Similarity=0.123 Sum_probs=78.4
Q ss_pred hhhhHHHHHHHhCCCCc----hHHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccC
Q 018767 167 IGFYTSETFVQAGLSSG----KLGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLD 242 (350)
Q Consensus 167 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (350)
.....+.+..+.+.+.. ........+...++.++.|++.||+|||+.+..+.....++.+....... ..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~---- 93 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN---VG---- 93 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc---ch----
Confidence 33444555555544432 26666677777777799999999999997666665543333222221111 00
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhhcccCCc-chhhhHhHHHHH-HHHHHHHHHHHHhHHHHhh
Q 018767 243 WVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI-NIKGVAGSLVVL-VNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~ 308 (350)
...........+...+ ...+...++..|..|. +.|+...+.... ...+|..++|.+.+.+...
T Consensus 94 --~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 --LALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred --HHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222222222222 3344555889999987 668888888887 5777888888777666554
No 265
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.97 E-value=0.011 Score=53.34 Aligned_cols=161 Identities=12% Similarity=0.012 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHH
Q 018767 147 RSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~ 224 (350)
+.++.+..+..+.+......+......+-+.+++++.+ +.....-++..+...+..+..-|..|-+.+-++.++++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 34444444555544433344444455555667777766 5555666777777888889999999999999999999999
Q ss_pred HHHHHHHHHhcccc-------------c---------------------------ccCchhHHHHHHHHHHHHHHhhccc
Q 018767 225 CFLAGTSFFLKGQN-------------M---------------------------FLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 225 ~~~~~~~~~~~~~~-------------~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
.++.++..+..+.. . ..+..++..++..-++.+.......
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 99987764321100 0 0111122222222222222233334
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
++..+|+-|...++..+...|+.++...+|-++|-.+++....
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~ 298 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLK 298 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 5556788898888888999999999999999988888887653
No 266
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.92 E-value=0.026 Score=46.50 Aligned_cols=40 Identities=15% Similarity=-0.002 Sum_probs=34.6
Q ss_pred hhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 269 VIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 269 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
+..+.+.++...|+-+.+.|+..++|+-.-..+...+.|.
T Consensus 392 af~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 392 AFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG 431 (510)
T ss_pred HHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhccc
Confidence 7888999999999999999999999988877777777653
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.78 E-value=0.043 Score=49.87 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=59.5
Q ss_pred hhhhHhhhhhccccccchhhhhhhcccCccc---hhhHHhHHHHHHHHHHHHHHHhcCCc-----------hhhHHHhhc
Q 018767 6 LTLEDFSTGYGIGVFSYVVPIFIAEIAPRNL---RGLLTTLNQLLIVTGSSVAYIIGSII-----------PWRILALTG 71 (350)
Q Consensus 6 l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~~~~~~~~~-----------~Wr~~f~~~ 71 (350)
.+++-.+..+|.|+.-+...+...|.+++++ |-....++..+.++|.++++++..++ +|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 5567778889999999999999999997643 56677777888888888887665433 488899888
Q ss_pred hHHHHHHHHHH
Q 018767 72 LVPCVLLLVGL 82 (350)
Q Consensus 72 ~~~~~~~~~~~ 82 (350)
++..+++++..
T Consensus 168 ~i~m~ia~lvf 178 (654)
T TIGR00926 168 AILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHH
Confidence 87777655543
No 268
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.76 E-value=0.0058 Score=50.17 Aligned_cols=61 Identities=20% Similarity=0.098 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
...++..++.+.+.+..-...+ .++.++.|++.+++..++...++.+|..++|.+.+.+..
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n-~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~ 71 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAAN-PYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLIL 71 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHH-HHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3445555555555555555565 999999999999999999999999999999999998773
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.70 E-value=0.016 Score=48.36 Aligned_cols=82 Identities=11% Similarity=-0.010 Sum_probs=44.8
Q ss_pred eehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHh---cCCc------hhhHHHhhchHH
Q 018767 4 CYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYII---GSII------PWRILALTGLVP 74 (350)
Q Consensus 4 ~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~---~~~~------~Wr~~f~~~~~~ 74 (350)
...++.-.+.+.+.|..........++ +|+|.-.-.+ .|.+++..+..++ .... +=..-|.+..+.
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm----~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~ 192 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM----SGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVI 192 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH----hcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHH
Confidence 344556667777888777777777776 4655433222 2222222222211 1111 223345566666
Q ss_pred HHHHHHHHhccCCChH
Q 018767 75 CVLLLVGLCFVPESPR 90 (350)
Q Consensus 75 ~~~~~~~~~~~~esp~ 90 (350)
.+++++.+..+|+.|-
T Consensus 193 ~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 193 LLLCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHHHhhcchH
Confidence 6777777777787774
No 270
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.65 E-value=0.1 Score=46.62 Aligned_cols=79 Identities=14% Similarity=0.007 Sum_probs=59.7
Q ss_pred ehhhhHhhhhhccccccchhhhhhhcccC---ccc-h--hhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHH
Q 018767 5 YLTLEDFSTGYGIGVFSYVVPIFIAEIAP---RNL-R--GLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVP 74 (350)
Q Consensus 5 ~l~~~R~l~G~~~g~~~~~~~~~i~~~~~---~~~-r--~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~ 74 (350)
.+....-+..+|.|+.-+...++-+|-++ +++ + ...+.++....+.|..++..+.-+. +|.+-|-+..+.
T Consensus 154 ~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 154 VLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVL 233 (571)
T ss_pred HHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHH
Confidence 45666777788999999999999999998 322 2 3677788888888988887776665 899999887776
Q ss_pred HHHHHHHHh
Q 018767 75 CVLLLVGLC 83 (350)
Q Consensus 75 ~~~~~~~~~ 83 (350)
..+++++++
T Consensus 234 ~~lai~iF~ 242 (571)
T KOG1237|consen 234 NALAILIFL 242 (571)
T ss_pred HHHHHHHHH
Confidence 666555444
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.48 E-value=0.051 Score=47.38 Aligned_cols=39 Identities=18% Similarity=-0.038 Sum_probs=33.5
Q ss_pred hhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 24 VPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 24 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
-..+..|.++.+|-.|..+++..+.++|.++++.+...+
T Consensus 165 FW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 165 FWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999988665544
No 272
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.37 E-value=0.0055 Score=52.62 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=66.1
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHH-HHHHHHHHHHhcCCc----hhhHHHhhchHHH
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLL-IVTGSSVAYIIGSII----PWRILALTGLVPC 75 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~ 75 (350)
+|.|+.+-.-++||+..+..+....+|+++..||+-|..+.++.+.. .++|--+|.++|+.. +=|..|...++.+
T Consensus 457 ~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAc 536 (618)
T KOG3762|consen 457 QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIAC 536 (618)
T ss_pred cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHH
Confidence 47788888999999999999999999999999999999999988654 455555666665554 8888888877777
Q ss_pred HHHHHHHh
Q 018767 76 VLLLVGLC 83 (350)
Q Consensus 76 ~~~~~~~~ 83 (350)
++.++...
T Consensus 537 l~~l~~~~ 544 (618)
T KOG3762|consen 537 LVTLALFI 544 (618)
T ss_pred HHHHHHHH
Confidence 66544433
No 273
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.33 E-value=0.011 Score=50.03 Aligned_cols=111 Identities=9% Similarity=-0.095 Sum_probs=66.6
Q ss_pred eehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcccchhhhhhcccCCcc---hhhhHhHHHHH
Q 018767 213 LIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPIN---IKGVAGSLVVL 289 (350)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~ 289 (350)
.+.++.++..++.+++.+........ .........+++.+...+.+..=+.+. ++..|.++++ .|.+.....+.
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~--~~~~~~~~~~gL~lia~G~G~~K~ni~-~~~~dq~~~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLP--SGIQLGLFYIGLALIAVGTGGIKPNIS-PFGADQYDEDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC--------CHHHHHHHHHHHHHHCCHHHHH-HHHHHCSSTTTTTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhh--hhHHHHHHHHHHHHHHhccccccccHH-HHHHHHhcccchhhhhhhHHHHHH
Confidence 45667777788877765554433220 000123344444455545544444555 8899998876 35778888899
Q ss_pred HHHHHHHHHHHHhHHHHhhhccch-hhHHHHhhHHHhh
Q 018767 290 VNWSGAWAVSYTFNFLMSWSSSGT-FFIYSAFSVITVL 326 (350)
Q Consensus 290 ~~~~g~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~ 326 (350)
..++|+.+++...+++.++.++.. |.+.++..+++.+
T Consensus 80 ~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 80 GINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHH
Confidence 999999999999999987744444 4444444443333
No 274
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.08 E-value=0.041 Score=46.08 Aligned_cols=108 Identities=10% Similarity=0.084 Sum_probs=64.6
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHH-HHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGT-FLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGF 263 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (350)
...++..+...+-+++-|.++|+.|+||.....+... .++.+.+ ....+.+. .+..+....+...++....
T Consensus 62 y~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L---~~i~~~s~-----~~~~l~~~il~~i~~~~s~ 133 (438)
T COG2270 62 YASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLL---WFIPPGSY-----LLLLLLFLILASIGFEFSN 133 (438)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHH---HHhCCCch-----HHHHHHHHHHHHHhcchhh
Confidence 4455566666677788899999999877765443333 3333333 22222110 2333333334444444433
Q ss_pred cchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHH
Q 018767 264 GAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYT 301 (350)
Q Consensus 264 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~ 301 (350)
....++..+..+++.-++..+.....+++|+.+.-.+
T Consensus 134 -Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 134 -VFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred -eehhhHhhhhcCccccCcccccccccccccchHHHHH
Confidence 3445888899888888888888888888887665444
No 275
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.03 E-value=0.0083 Score=47.03 Aligned_cols=87 Identities=21% Similarity=0.244 Sum_probs=61.3
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVL 77 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~ 77 (350)
+++.+.+..++.|.+.+.....+.....+.+| ++||++.|+.-...+++..+-..+...+ .-+..+++...+.++
T Consensus 95 ~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v 173 (250)
T PF06813_consen 95 PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVV 173 (250)
T ss_pred chHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 45677777888888877777777777778887 6899999999999999888776665544 244555555555555
Q ss_pred HHHHHhccCCCh
Q 018767 78 LLVGLCFVPESP 89 (350)
Q Consensus 78 ~~~~~~~~~esp 89 (350)
.++...++++.|
T Consensus 174 ~l~~~~~vr~~~ 185 (250)
T PF06813_consen 174 CLVAMFFVRPVP 185 (250)
T ss_pred HHHHhhheeccC
Confidence 555555555443
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.98 E-value=0.32 Score=41.82 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHH----HHHHHHHhcccccccCchhHHHHHHHHHHHHHHh
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCF----LAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFS 260 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (350)
.....-.+..++.++..|.+.||..|.+....+....-++.. ++..............+..........+.+....
T Consensus 42 iygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 121 (432)
T PF06963_consen 42 IYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIER 121 (432)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHH
Confidence 444455667777888889999999999987666554433322 2222222222110011112222222222222211
Q ss_pred hcccchhhh----hhcccC--CcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh-hccchhhHHHHhhHHHhh
Q 018767 261 IGFGAVPWV----IMSEIF--PINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW-SSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 261 ~~~~~~~~~----~~~e~~--p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 326 (350)
........+ ++..+. ++......++.+.-.-.+...++|.+.|.+.+. +......+.++...+...
T Consensus 122 Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 122 LASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 111111101 111222 233345555555555667899999999999885 434444444444444443
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.91 E-value=0.027 Score=35.58 Aligned_cols=67 Identities=13% Similarity=-0.065 Sum_probs=55.1
Q ss_pred hhhhhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHH
Q 018767 165 NGIGFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTS 231 (350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 231 (350)
+.++..+|...++.+++..+ +..+...++.++|.+...++.++..+++.+..+.+...+..+.+++.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556778888898888877 88888999999999999999999888888888888877777777554
No 278
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.88 E-value=0.089 Score=43.56 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=28.4
Q ss_pred hhhhHHHHHHHhCCCCchHHHHHHHHHhhh--HHhhHhhhhc-----ccCCceeehhh
Q 018767 167 IGFYTSETFVQAGLSSGKLGTILYACVQVP--ITVVGAFLMD-----KSGRRPLIMIS 217 (350)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~l~d-----~~grr~~~~~~ 217 (350)
.....|.+++..+.+-.. ...+....-. --+++..+.| |+||||..++-
T Consensus 49 L~~~iP~lL~ak~vSyt~--~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 49 LIGAIPLLLQAKGVSYTS--QAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred HhhhhHHHhcCCCcchhh--hhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 333778888765555433 1122222221 2457788888 99999876653
No 279
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.80 E-value=0.012 Score=48.03 Aligned_cols=76 Identities=24% Similarity=0.339 Sum_probs=60.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCc-cchhhHHhHHHH-HHHHHHHHHHHhcCCc------hhhHHHhhchH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPR-NLRGLLTTLNQL-LIVTGSSVAYIIGSII------PWRILALTGLV 73 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~~~~~~~~~------~Wr~~f~~~~~ 73 (350)
+.+.+++.|+.+|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.++..+ +||..|.+...
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 467788999999999999999999999999987 678998888888 5777888887665543 68886666555
Q ss_pred HHHH
Q 018767 74 PCVL 77 (350)
Q Consensus 74 ~~~~ 77 (350)
....
T Consensus 173 ~~~~ 176 (338)
T COG0477 173 LGLL 176 (338)
T ss_pred HHHH
Confidence 5443
No 280
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.67 E-value=0.43 Score=41.10 Aligned_cols=38 Identities=16% Similarity=-0.060 Sum_probs=32.8
Q ss_pred hhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 25 PIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 25 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
.....|.++.+|-.|..++++.+.+++..++..+..++
T Consensus 170 w~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 170 WQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888889999999999999999999998887766
No 281
>PRK03612 spermidine synthase; Provisional
Probab=95.63 E-value=0.29 Score=43.45 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=31.7
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHhHHHHhh--hccchhhHHHHhhHHHhh
Q 018767 280 KGVAGSLVVLVNWSGAWAVSYTFNFLMSW--SSSGTFFIYSAFSVITVL 326 (350)
Q Consensus 280 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~ 326 (350)
-+...|-.+....+|+++|..+.+++.-. +......+.+.+.+++++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 36677888888999999999998877642 333444445554444443
No 282
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.51 E-value=0.0016 Score=51.09 Aligned_cols=115 Identities=17% Similarity=0.099 Sum_probs=76.4
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcc
Q 018767 185 LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGF 263 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (350)
+..+++..-.++-++++|++.|| +|-|...++-+.+..++-++++.-...+. .|....+-++++.+.- ..
T Consensus 83 LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~a--------Fw~M~~GRF~FGIGgE-Sl 153 (459)
T KOG4686|consen 83 LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHA--------FWTMLAGRFLFGIGGE-SL 153 (459)
T ss_pred eeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHH--------HHHHHhhheeeccCch-hh
Confidence 66777888888889999999997 56665555444455555555433222221 3444444444443322 22
Q ss_pred cchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 264 GAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 264 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
......+...-+..+.-+.++|+...+.++|+.+--.+.+++.+.
T Consensus 154 AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 154 AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 334447777778888889999999999999998877777777764
No 283
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.31 E-value=0.022 Score=41.05 Aligned_cols=58 Identities=9% Similarity=0.057 Sum_probs=50.6
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhc
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIG 59 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 59 (350)
+.+.++.+-.+.|++.+..++....++.+..++++|++..++.......+.+.|.++.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999999999998888887777776543
No 284
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.93 E-value=0.51 Score=40.75 Aligned_cols=106 Identities=7% Similarity=-0.150 Sum_probs=82.3
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhccc
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGFG 264 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (350)
...++......+++++++.+.|+++.|..+.++..........+. ..+ .+.......+.+.+.+..+.
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl---~~N---------~y~~yfssallG~Gaallw~ 121 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFL---FPN---------SYYLYFSSALLGFGAALLWT 121 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHH---hcc---------hHHHHHHHHHhhhhHHheec
Confidence 557777888888999999999999999999988887777666652 222 35566666677777777676
Q ss_pred chhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhH
Q 018767 265 AVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFN 303 (350)
Q Consensus 265 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~ 303 (350)
.-. .+.+|..+++.+.+..++.-.....+.++|..+.-
T Consensus 122 GqG-~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 122 GQG-GYLTSNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred ccc-eehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 666 89999999999999999888888887777765543
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.50 E-value=0.12 Score=40.57 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=34.9
Q ss_pred HHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHH
Q 018767 173 ETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCF 226 (350)
Q Consensus 173 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 226 (350)
++++++++...+ ..........++...+.|-+.||-|||+..+.-.+...++++
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi 117 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI 117 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH
Confidence 345666776665 333333344556667788999999999987765555554443
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.39 E-value=0.024 Score=47.67 Aligned_cols=62 Identities=16% Similarity=0.015 Sum_probs=55.7
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
+|.+..++.-+..|+..|..++.....+.|-.++++|-..++....+.+.|..++..++-.+
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35677788899999999999999999999999999999999999999999999999887544
No 287
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.30 E-value=1 Score=38.06 Aligned_cols=54 Identities=11% Similarity=-0.004 Sum_probs=23.8
Q ss_pred HHHHHHHhhcchhhhhhHHHHHHHhCCCCch-----HHHHHHHHHhhhHHhhHhhhhcc
Q 018767 154 SLMVLQQFVGINGIGFYTSETFVQAGLSSGK-----LGTILYACVQVPITVVGAFLMDK 207 (350)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~l~d~ 207 (350)
++.......-.+.+..-.+++.+.+.....+ .......+..++....-.++..|
T Consensus 24 ~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 24 LLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred HHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333455555555555544333223 22333334444445555555555
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.24 E-value=0.97 Score=39.69 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=72.7
Q ss_pred hhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc-------------Cchh------HHHHHHHHH
Q 018767 194 QVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL-------------DWVP------VLAVGGILI 254 (350)
Q Consensus 194 ~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~------~~~~~~~~~ 254 (350)
.++...+..+++++++|+++..+....+.....+++...+...+.-.. +... .+......+
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 344566788999999999988776666666666666554322110000 0000 000111112
Q ss_pred HHHHHhhc-ccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 255 YIAFFSIG-FGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 255 ~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
..-.++.. .+-+.|.++.|..+.++..+-.++.....++|..++..+...+.+
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223322 233568999999999999999999999999999999888887776
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.12 E-value=1.2 Score=40.09 Aligned_cols=157 Identities=15% Similarity=0.094 Sum_probs=86.8
Q ss_pred hhhHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhhhcc-cCCceeehhhhHHHHHHHHHHHHHHHhccccc-----
Q 018767 168 GFYTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFLMDK-SGRRPLIMISAAGTFLGCFLAGTSFFLKGQNM----- 239 (350)
Q Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 239 (350)
.....++...++.+... ..............+.+++++|. +||-+.+.++.++..++..++...........
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 44444455555555533 33334444555667889999996 58888998888888888766655544332100
Q ss_pred ------ccCc---hhHHHHHHHHHHHHHHhhcccchhhhhhcccCCc----chh--hhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 240 ------FLDW---VPVLAVGGILIYIAFFSIGFGAVPWVIMSEIFPI----NIK--GVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 240 ------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~----~~r--~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.... ........+.....+. .+.-+...++-+|.++. +.+ ..-+.......+.|..++..+.-+
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~-gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGA-GGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheecc-CCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 0000 0011111111111122 22223333778888872 222 356677778888899888888888
Q ss_pred HHhh-hccchhhHHHHhhHHHh
Q 018767 305 LMSW-SSSGTFFIYSAFSVITV 325 (350)
Q Consensus 305 l~~~-~~~~~~~~~~~~~~~~~ 325 (350)
..++ ++...+.+..+...++.
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAI 238 (571)
T ss_pred hhhcccceeeccHHHHHHHHHH
Confidence 8665 44444555444444433
No 290
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=93.03 E-value=2.3 Score=33.10 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=21.8
Q ss_pred HhhhHHhhHhhhhcccCCceeehhhhHHHHHHH
Q 018767 193 VQVPITVVGAFLMDKSGRRPLIMISAAGTFLGC 225 (350)
Q Consensus 193 ~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 225 (350)
+..+..+.+-.++.|+..|++.+++.+++.+..
T Consensus 252 CT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fg 284 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVRTVTLIGGILFIIFG 284 (294)
T ss_pred HHHHHHhhhHHHhhhheeEEEEEecchhHHHHH
Confidence 333333344467889999999888877765543
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.33 E-value=8.8 Score=33.53 Aligned_cols=115 Identities=13% Similarity=-0.030 Sum_probs=75.6
Q ss_pred HhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhccccccc--------------C--chh-----HHHHHH
Q 018767 193 VQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFL--------------D--WVP-----VLAVGG 251 (350)
Q Consensus 193 ~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~--~~~-----~~~~~~ 251 (350)
+.++..++..++.++..|+++.......+....++++...+...+.... . |.. |.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 4566678889999999999998877777777777776665522110000 0 000 222222
Q ss_pred HHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHHHh
Q 018767 252 ILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFLMS 307 (350)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 307 (350)
....-.-......-+.|..+.|....++..+-.++.+...+++..++..+..++.+
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222222222333667889999999999999999999999999998888887765
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.50 E-value=9.7 Score=33.49 Aligned_cols=36 Identities=11% Similarity=-0.024 Sum_probs=19.7
Q ss_pred hhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 269 VIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 269 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.++-.+..++.++.|........+.|-+++-.++-.
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFla 176 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLA 176 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHh
Confidence 344445566666666555555555666555544433
No 293
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=83.11 E-value=17 Score=32.68 Aligned_cols=28 Identities=29% Similarity=0.268 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCce
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRP 212 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~ 212 (350)
.......+.+.+++..++++-..++.|+
T Consensus 301 ~~i~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 301 AAIILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 3344555666677777777777676543
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.30 E-value=23 Score=30.93 Aligned_cols=28 Identities=7% Similarity=-0.005 Sum_probs=13.0
Q ss_pred HHHHhhhHHhhHhhhhcccCCceeehhh
Q 018767 190 YACVQVPITVVGAFLMDKSGRRPLIMIS 217 (350)
Q Consensus 190 ~~~~~~~~~~~~g~l~d~~grr~~~~~~ 217 (350)
..+..++..+..-.+..|+..|.-+..+
T Consensus 54 ~~v~~l~~~~~~~~~~~~i~~~~Ri~~~ 81 (437)
T TIGR00939 54 SQLPSLLFNSLNLFLIFRIPVTVRLLGG 81 (437)
T ss_pred HHHHHHHHHHHHHHHhhccCccchhHHH
Confidence 3334444444455555665543333333
No 295
>PRK15015 carbon starvation protein A; Provisional
Probab=76.00 E-value=65 Score=29.66 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=22.9
Q ss_pred cccCccchhhHHhHH-HHHHHHHHHHHHHhcCCchhh
Q 018767 30 EIAPRNLRGLLTTLN-QLLIVTGSSVAYIIGSIIPWR 65 (350)
Q Consensus 30 ~~~~~~~r~~~~~~~-~~~~~~G~~~~~~~~~~~~Wr 65 (350)
|+.|.+++ ...|=. ....+.|+++||.++...||-
T Consensus 79 DYvPt~k~-VLfGHHFasIAGAGPivGPvlAa~~Gwl 114 (701)
T PRK15015 79 DYVPTDKK-VLFGHHFAAIAGAGPLVGPVLAAQMGYL 114 (701)
T ss_pred CcCcCCcc-chhHHHHHHHhccCccHHHHHHHHHcch
Confidence 55554443 444433 445678899999998888875
No 296
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=75.94 E-value=2.3 Score=34.54 Aligned_cols=60 Identities=10% Similarity=0.048 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHHH
Q 018767 246 VLAVGGILIYIAFFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNFL 305 (350)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 305 (350)
...+....++-+..+.+.....+--+.+-.+++.|-.+++.....-.+|-.++..+.-.+
T Consensus 342 i~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 342 IWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 333333444444443333333233344545777899999988887777777776655433
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=74.61 E-value=2.6 Score=34.28 Aligned_cols=62 Identities=10% Similarity=-0.070 Sum_probs=52.2
Q ss_pred CCceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 1 MDLCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 1 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
++++...+.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 34556667778889888888888888888878899999999999999999999998887655
No 298
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=73.20 E-value=4.5 Score=27.52 Aligned_cols=31 Identities=10% Similarity=-0.034 Sum_probs=14.7
Q ss_pred HHHHhccCCChHHHHHhCChHHHHHHHHHHh
Q 018767 79 LVGLCFVPESPRWLAKVGLDKEFQVALRKLR 109 (350)
Q Consensus 79 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~ 109 (350)
+++++.+|+.|......+..+.++..+++++
T Consensus 57 i~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 57 IILSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred HHHHHhccCCcccccccccCCCHHHHHHHHH
Confidence 3456667877743222223333444444443
No 299
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=72.56 E-value=13 Score=26.67 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=27.8
Q ss_pred HHhhcccchhhhhhcccCCcchhhhHhHHHHHHHHHHHHH
Q 018767 258 FFSIGFGAVPWVIMSEIFPINIKGVAGSLVVLVNWSGAWA 297 (350)
Q Consensus 258 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 297 (350)
+|+.+...+.|.+++....++..|+..|+-.+-.+++-..
T Consensus 106 ~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 106 FFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3333444455667777777777899999988888876554
No 300
>COG1422 Predicted membrane protein [Function unknown]
Probab=68.80 E-value=48 Score=25.05 Aligned_cols=13 Identities=0% Similarity=-0.010 Sum_probs=5.6
Q ss_pred HHHHHHHHhccCC
Q 018767 75 CVLLLVGLCFVPE 87 (350)
Q Consensus 75 ~~~~~~~~~~~~e 87 (350)
++..-++..++-|
T Consensus 58 gl~~~i~~~~liD 70 (201)
T COG1422 58 GLYITILQKLLID 70 (201)
T ss_pred HHHHHHHHHHhcc
Confidence 3334444444444
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.52 E-value=32 Score=22.89 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=32.4
Q ss_pred chhhhHhHHHHHHHHHHHHHHHHHhHHHHhhhc---cchhhHHHHhhHHHhh
Q 018767 278 NIKGVAGSLVVLVNWSGAWAVSYTFNFLMSWSS---SGTFFIYSAFSVITVL 326 (350)
Q Consensus 278 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~ 326 (350)
+.++.+.++-...-.+++++.....|++.++.. .+...++..+...+++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ 89 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGV 89 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 456778888888888888888888889988732 3333444444444444
No 302
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=67.10 E-value=36 Score=27.10 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=14.4
Q ss_pred hhHHHhhchHHHHHHHHHHhccCCC
Q 018767 64 WRILALTGLVPCVLLLVGLCFVPES 88 (350)
Q Consensus 64 Wr~~f~~~~~~~~~~~~~~~~~~es 88 (350)
..+.-+++.++.++....+.+++.+
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecCC
Confidence 4445566666666666666555433
No 303
>PRK09609 hypothetical protein; Provisional
Probab=62.52 E-value=87 Score=25.76 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHhcC
Q 018767 44 NQLLIVTGSSVAYIIGS 60 (350)
Q Consensus 44 ~~~~~~~G~~~~~~~~~ 60 (350)
.-.+...|+..|...|.
T Consensus 48 iI~G~LFGPv~G~ivG~ 64 (312)
T PRK09609 48 KITGFIFGPIVGFFTGL 64 (312)
T ss_pred HHHHHHhchHHHHHHHH
Confidence 34445555555554443
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=62.49 E-value=2.6 Score=34.73 Aligned_cols=58 Identities=10% Similarity=0.194 Sum_probs=3.8
Q ss_pred ceehhhhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcC
Q 018767 3 LCYLTLEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGS 60 (350)
Q Consensus 3 ~~~l~~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 60 (350)
-+..++.-++.|+..|-.......+..+..++++|..+..+...+..+|..+|..++.
T Consensus 248 d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 248 DAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -------------------HHHH-----------------------------------
T ss_pred hHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677889999999999999999999999999999988888888888888776653
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.58 E-value=18 Score=24.02 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=11.0
Q ss_pred HHhhHhhhhccc-CCceeehh
Q 018767 197 ITVVGAFLMDKS-GRRPLIMI 216 (350)
Q Consensus 197 ~~~~~g~l~d~~-grr~~~~~ 216 (350)
.....||+.||+ |.++.-++
T Consensus 58 VGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 58 VGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHhcCCCcHHHH
Confidence 344567777875 44444333
No 306
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=58.62 E-value=34 Score=19.81 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhcCCchhhHHHhhchHHHHHHHHHHhccCCCh
Q 018767 47 LIVTGSSVAYIIGSIIPWRILALTGLVPCVLLLVGLCFVPESP 89 (350)
Q Consensus 47 ~~~~G~~~~~~~~~~~~Wr~~f~~~~~~~~~~~~~~~~~~esp 89 (350)
+..+|.+.+++-+...+.+....++.+.+++...+...+|+++
T Consensus 14 ~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 14 GEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4456666666666666888888888888777666655666543
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=56.50 E-value=28 Score=29.25 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=54.4
Q ss_pred HhhhhcccCCceeehhhhHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHhhcc--cchhhhhhcccCCcc
Q 018767 201 GAFLMDKSGRRPLIMISAAGTFLGCFLAGTSFFLKGQNMFLDWVPVLAVGGILIYIAFFSIGF--GAVPWVIMSEIFPIN 278 (350)
Q Consensus 201 ~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~p~~ 278 (350)
.-.+.|...-|++++.-.+.......++.+. .+ .+.. -+.-.+++... -...++++-+..+++
T Consensus 62 vFlLTD~lrYKPvivlq~ls~v~~w~~lv~g---~s--------V~~m----QvlE~FyG~~tAaEIAYysYIYs~Vd~~ 126 (433)
T KOG3810|consen 62 VFLLTDYLRYKPVVVLQALSGVPVWIMLVFG---PS--------VKAM----QVLEFFYGPATAAEIAYYSYIYSKVDPE 126 (433)
T ss_pred HHHHhhhhhcceeeeeeccchhHHHHHHHhc---CC--------chhe----eeehhhcChHHHHHHhhhheeeeecCHH
Confidence 3357788888888777655554444444221 11 0100 01111111111 123356777778899
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHhHHHHhh
Q 018767 279 IKGVAGSLVVLVNWSGAWAVSYTFNFLMSW 308 (350)
Q Consensus 279 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 308 (350)
++-+++|.+....-.|-..+..+...+.+.
T Consensus 127 ~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 127 MYKRVTGYCRAAFLVGKFVGSVLAQLLVSL 156 (433)
T ss_pred HHHHHHHHhHHHHHHHhHHHhHHHHHHhhh
Confidence 999999999988888888777777666554
No 308
>COG1288 Predicted membrane protein [Function unknown]
Probab=56.48 E-value=78 Score=27.49 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=15.2
Q ss_pred hhhHHHhhchHHHHHHHHH--HhccCCCh
Q 018767 63 PWRILALTGLVPCVLLLVG--LCFVPESP 89 (350)
Q Consensus 63 ~Wr~~f~~~~~~~~~~~~~--~~~~~esp 89 (350)
+||...|+......+..+. ...+++.|
T Consensus 217 ~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP 245 (481)
T COG1288 217 GLRIVVWVVFTLISIIYVYWYASKVKKDP 245 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 7999988765544443322 22345544
No 309
>PRK03612 spermidine synthase; Provisional
Probab=55.60 E-value=21 Score=32.00 Aligned_cols=54 Identities=13% Similarity=-0.009 Sum_probs=33.1
Q ss_pred hhHhhhhhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 8 LEDFSTGYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 8 ~~R~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
..-++.|+..|+..|....+..+... ++-|+..|-......+|.++|.++.+++
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 34456677888888887777765432 2334555666666666666666665544
No 310
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=48.67 E-value=37 Score=22.68 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=19.2
Q ss_pred hhhHHHhhchHHHHH-HHHHHhccCCCh
Q 018767 63 PWRILALTGLVPCVL-LLVGLCFVPESP 89 (350)
Q Consensus 63 ~Wr~~f~~~~~~~~~-~~~~~~~~~esp 89 (350)
+|+.+|+++..++++ +.+.+.+.||+.
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 799998887666555 555566778865
No 311
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=48.23 E-value=18 Score=24.90 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=13.9
Q ss_pred hhHHHhhchHHH-----HH-HHHHHhccCCChH
Q 018767 64 WRILALTGLVPC-----VL-LLVGLCFVPESPR 90 (350)
Q Consensus 64 Wr~~f~~~~~~~-----~~-~~~~~~~~~esp~ 90 (350)
.|..|.+..+++ ++ -+++++.+|+.|.
T Consensus 31 VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~ 63 (121)
T TIGR02978 31 VRILVVSALLFGGGFFVLVAYIALWLLLDKKPI 63 (121)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcc
Confidence 466665544332 22 2344566787774
No 312
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=47.13 E-value=77 Score=20.49 Aligned_cols=40 Identities=15% Similarity=0.337 Sum_probs=19.5
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHH
Q 018767 136 SIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQ 177 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (350)
.++++.+.+ ++..+.+....+..+.++.....+.|.++..
T Consensus 6 ~f~~L~r~r--~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~ 45 (91)
T PF04341_consen 6 EFQELVRRR--RRLAWPLSAIFLVLYFGFVLLSAFAPELMAT 45 (91)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCHHHHcC
Confidence 344554422 3333334444444444455666677766653
No 313
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=45.16 E-value=85 Score=26.32 Aligned_cols=35 Identities=6% Similarity=-0.043 Sum_probs=23.7
Q ss_pred HHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHH
Q 018767 187 TILYACVQVPITVVGAFLMDKSGRRPLIMISAAGT 221 (350)
Q Consensus 187 ~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~ 221 (350)
........+.++++.+.+.+++|-|..+.++....
T Consensus 64 l~~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y 98 (390)
T KOG3097|consen 64 LGALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPY 98 (390)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34444555566667778999999998876554443
No 314
>PF08997 UCR_6-4kD: Ubiquinol-cytochrome C reductase complex, 6.4kD protein; InterPro: IPR015089 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4 kDa protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein-binding factor []. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0009055 electron carrier activity; PDB: 1NTM_K 1SQV_K 1SQB_K 1NU1_K 1SQQ_K 1BE3_K 1BGY_W 2YBB_k 2FYU_K 1L0N_K ....
Probab=43.78 E-value=48 Score=19.10 Aligned_cols=41 Identities=7% Similarity=0.144 Sum_probs=27.2
Q ss_pred hhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCchhhHHH
Q 018767 28 IAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSIIPWRILA 68 (350)
Q Consensus 28 i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~Wr~~f 68 (350)
++....+++...+-.+.-.....|..-+..+..+.+||.++
T Consensus 2 ~~r~~G~k~~~lak~w~ps~~~~G~~~~l~lvy~TDWklIl 42 (56)
T PF08997_consen 2 LSRLIGPKYIELAKNWIPSAAAWGAAGGLALVYFTDWKLIL 42 (56)
T ss_dssp GGGG-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred chhhhcHHHHHHHHHhchhHHHHhhhhhhheeeecchHhhh
Confidence 34455667777777777777777776666666666888764
No 315
>PRK02237 hypothetical protein; Provisional
Probab=43.36 E-value=55 Score=21.90 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=35.3
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
-..+.++...++.++++++..|+....+-=.++..++.++..++
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 66788888889999999999999887777777777766665554
No 316
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=41.94 E-value=92 Score=22.16 Aligned_cols=26 Identities=15% Similarity=0.129 Sum_probs=19.4
Q ss_pred hhhcccCccchhhHHhHHHHHHHHHH
Q 018767 27 FIAEIAPRNLRGLLTTLNQLLIVTGS 52 (350)
Q Consensus 27 ~i~~~~~~~~r~~~~~~~~~~~~~G~ 52 (350)
-+.|++|+..|....+.........-
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~k 82 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFVK 82 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999999988887766555433
No 317
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=41.94 E-value=1.8e+02 Score=25.14 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=23.3
Q ss_pred HHHHHHhhhHHhhHhhhhcccCCceeehhhhHHH
Q 018767 188 ILYACVQVPITVVGAFLMDKSGRRPLIMISAAGT 221 (350)
Q Consensus 188 ~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~ 221 (350)
++-+...++...+.|...|+..|+|++.....+-
T Consensus 70 lvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lq 103 (503)
T KOG2601|consen 70 LVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQ 103 (503)
T ss_pred HHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhc
Confidence 3344455566677788899999999876555443
No 318
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=41.40 E-value=49 Score=22.07 Aligned_cols=44 Identities=18% Similarity=0.133 Sum_probs=35.5
Q ss_pred HHHHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 185 LGTILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
-.++.++...++.++++++..|+....+-=.++..++.++..++
T Consensus 58 RvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 58 RVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred hHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 67788888889999999999999888777777777766665554
No 319
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=38.90 E-value=92 Score=22.08 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=20.2
Q ss_pred hhhcccCccchhhHHhHHHHHHHHHHHH
Q 018767 27 FIAEIAPRNLRGLLTTLNQLLIVTGSSV 54 (350)
Q Consensus 27 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 54 (350)
-+.|++|+..|....+..........-+
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~ 86 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSL 86 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999998888777655544333
No 320
>PRK10263 DNA translocase FtsK; Provisional
Probab=38.33 E-value=1.1e+02 Score=30.94 Aligned_cols=20 Identities=15% Similarity=-0.047 Sum_probs=10.4
Q ss_pred HHHHhhhHHhhHhhhhcccC
Q 018767 190 YACVQVPITVVGAFLMDKSG 209 (350)
Q Consensus 190 ~~~~~~~~~~~~g~l~d~~g 209 (350)
.+.++.+|..+...+..-+|
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34555555555555544455
No 321
>COG3162 Predicted membrane protein [Function unknown]
Probab=38.08 E-value=1.2e+02 Score=19.99 Aligned_cols=66 Identities=14% Similarity=0.229 Sum_probs=28.2
Q ss_pred CcchhhhhhcccchhHHHHHHHHHHHHHhhcchhhhhhHHHHHHHhCCCCchHHHHHHHHHhhhHHhh
Q 018767 133 PKASIRDLFKSKYIRSVIIGVSLMVLQQFVGINGIGFYTSETFVQAGLSSGKLGTILYACVQVPITVV 200 (350)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (350)
....++++.+++ ++..+...+.++..+.++..+..|.|.++..--.+.+.....+.+++.++.+++
T Consensus 11 a~p~f~eLv~kr--~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~~Vt~Gip~gvg~fv~tfV 76 (102)
T COG3162 11 ANPRFRELVRKR--RRFAVPLTLIFLVVYFGFILLIAFAPGWLATPLFGASVTRGIPFGVGVFVMTFV 76 (102)
T ss_pred cCHhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcccCCceehhHhHHHHHHHHHHH
Confidence 344566666533 333333444444433334444445554433211122123444555555544443
No 322
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.37 E-value=1.5e+02 Score=23.29 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=21.0
Q ss_pred hhhcccCCcchhhhHhHHHHHHHHHHHHHHHHHhHH
Q 018767 269 VIMSEIFPINIKGVAGSLVVLVNWSGAWAVSYTFNF 304 (350)
Q Consensus 269 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 304 (350)
.-..+.+|. ......++....+-+.+..|.++.-+
T Consensus 194 ~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 194 GALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566764 45666676666666666666555433
No 323
>PLN02601 beta-carotene hydroxylase
Probab=36.09 E-value=2.2e+02 Score=22.89 Aligned_cols=22 Identities=9% Similarity=-0.159 Sum_probs=13.9
Q ss_pred HHHHHHHhhhHHhhHhhhhccc
Q 018767 187 TILYACVQVPITVVGAFLMDKS 208 (350)
Q Consensus 187 ~~~~~~~~~~~~~~~g~l~d~~ 208 (350)
.....++.+++.=...+++.|+
T Consensus 136 ~~al~lgtfvgMEf~Aw~aHKY 157 (303)
T PLN02601 136 TFALSVGAAVGMEFWARWAHRA 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334566666766777777764
No 324
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=35.89 E-value=1.2e+02 Score=19.41 Aligned_cols=64 Identities=20% Similarity=0.151 Sum_probs=34.6
Q ss_pred hhccccccchhhhhhhcccCccchhhHHhHHHHHHHHHHHHHHHhcCCc----hhhHHHhhchHHHHHHHH
Q 018767 14 GYGIGVFSYVVPIFIAEIAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII----PWRILALTGLVPCVLLLV 80 (350)
Q Consensus 14 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~----~Wr~~f~~~~~~~~~~~~ 80 (350)
|+|-=...|..+.++.|..-.... .++......+|.++|.+....+ ..|..+..+.+.+.+...
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~---ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQ---AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 333334556777777775432222 3555566667777777666654 334445555554444433
No 325
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=35.58 E-value=93 Score=22.08 Aligned_cols=28 Identities=11% Similarity=0.042 Sum_probs=14.5
Q ss_pred HhccCCChHHHHHhCChHHHHHHHHHHh
Q 018767 82 LCFVPESPRWLAKVGLDKEFQVALRKLR 109 (350)
Q Consensus 82 ~~~~~esp~~~~~~~~~~~~~~~~~~~~ 109 (350)
+..+-.+.+|-.-+.+.++..+.+++-.
T Consensus 27 WvlvYRt~~Yk~LKa~vdK~sKKLE~~K 54 (186)
T KOG3312|consen 27 WVLVYRTDKYKRLKAEVDKQSKKLEKKK 54 (186)
T ss_pred EEEEEehhHHHHHHHHHHHHHHHHHHHh
Confidence 4445556565555555555555554443
No 326
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=35.21 E-value=3.7e+02 Score=25.66 Aligned_cols=20 Identities=15% Similarity=0.331 Sum_probs=10.7
Q ss_pred HHHHHhhhHHhhHhhhhccc
Q 018767 189 LYACVQVPITVVGAFLMDKS 208 (350)
Q Consensus 189 ~~~~~~~~~~~~~g~l~d~~ 208 (350)
...+.++++.++.-.+.||.
T Consensus 165 ~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 165 LLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 34444555555555666664
No 327
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=34.42 E-value=40 Score=27.01 Aligned_cols=44 Identities=23% Similarity=0.271 Sum_probs=29.3
Q ss_pred hHHHHHHHhCCCCch--HHHHHHHHHhhhHHhhHhhh---------hcccCCcee
Q 018767 170 YTSETFVQAGLSSGK--LGTILYACVQVPITVVGAFL---------MDKSGRRPL 213 (350)
Q Consensus 170 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l---------~d~~grr~~ 213 (350)
|+-.++.+.+.++.. ..+....+...+..++.|.. .||+|||+.
T Consensus 39 Ylllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 39 YLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 444455677777665 66666677777777776543 468899874
No 328
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=33.35 E-value=14 Score=29.36 Aligned_cols=15 Identities=7% Similarity=0.299 Sum_probs=0.0
Q ss_pred HHhhheeeecccCCC
Q 018767 323 ITVLFVAKFVPETKG 337 (350)
Q Consensus 323 ~~~~~~~~~~~~~~~ 337 (350)
..++++++++.+++.
T Consensus 176 FlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 176 FLAILIWLYVHDQRH 190 (381)
T ss_dssp ---------------
T ss_pred HHHHHHHHHhcCCCC
Confidence 344555666665543
No 329
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=31.79 E-value=3.5e+02 Score=23.65 Aligned_cols=33 Identities=12% Similarity=-0.162 Sum_probs=21.6
Q ss_pred ccchhhHHhHHHHHHHHHHHHHHHhcCCchhhH
Q 018767 34 RNLRGLLTTLNQLLIVTGSSVAYIIGSIIPWRI 66 (350)
Q Consensus 34 ~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~Wr~ 66 (350)
++.++..+.+..+..+.|.+.-|......|+-+
T Consensus 9 ~s~~~~vl~l~gT~IGAGvL~lP~a~~~~G~~~ 41 (415)
T COG0814 9 SSDLGGVLILAGTAIGAGVLFLPVAFGGGGFWP 41 (415)
T ss_pred cchHHHHHHHHccccccchhhhhHHhcCCcHHH
Confidence 455677777777777777777776666655443
No 330
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=30.98 E-value=2.8e+02 Score=22.27 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=20.2
Q ss_pred cccccchhhhhhhcccCccchhhHHhH
Q 018767 17 IGVFSYVVPIFIAEIAPRNLRGLLTTL 43 (350)
Q Consensus 17 ~g~~~~~~~~~i~~~~~~~~r~~~~~~ 43 (350)
.|+-.....+++.+..|+++|-|+.-+
T Consensus 30 L~iDN~iviai~~~~Lp~~qr~ral~~ 56 (254)
T COG0861 30 LGIDNAIVIAILASKLPPKQRKKALFI 56 (254)
T ss_pred HHhhHHHHHHHHHhhCCHHHHHHHHHH
Confidence 355566778889999999888776543
No 331
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=30.91 E-value=2.3e+02 Score=21.31 Aligned_cols=24 Identities=17% Similarity=-0.040 Sum_probs=16.7
Q ss_pred ccchhhhhhhcccCccchhhHHhH
Q 018767 20 FSYVVPIFIAEIAPRNLRGLLTTL 43 (350)
Q Consensus 20 ~~~~~~~~i~~~~~~~~r~~~~~~ 43 (350)
-.....+.+.+..|+++|.++.-+
T Consensus 13 DN~~vi~~~~~~lp~~~r~kal~~ 36 (183)
T PF03741_consen 13 DNAFVIAMIFRKLPPEQRRKALFW 36 (183)
T ss_pred hHHHHHHHHHhCCCHHHhhhhHHH
Confidence 345566777888998887766544
No 332
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.62 E-value=33 Score=30.53 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=8.6
Q ss_pred HHHHhhhHHhhHhhhhcc
Q 018767 190 YACVQVPITVVGAFLMDK 207 (350)
Q Consensus 190 ~~~~~~~~~~~~g~l~d~ 207 (350)
..+.+++++..++++..-
T Consensus 372 ~v~~G~~agY~s~rlyk~ 389 (628)
T KOG1278|consen 372 FVFMGFVAGYVSARLYKT 389 (628)
T ss_pred HHHHHHhhhhhhhhhHhh
Confidence 344445555555555443
No 333
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=29.82 E-value=15 Score=25.71 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=8.5
Q ss_pred hHHHhhchHHHHHHHHH
Q 018767 65 RILALTGLVPCVLLLVG 81 (350)
Q Consensus 65 r~~f~~~~~~~~~~~~~ 81 (350)
||++++..++.++++++
T Consensus 1 RW~l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLF 17 (130)
T ss_pred CeeeHHHHHHHHHHHHH
Confidence 56665555444443333
No 334
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=29.29 E-value=85 Score=15.72 Aligned_cols=20 Identities=5% Similarity=0.106 Sum_probs=13.3
Q ss_pred HHHHHHhhhHHhhHhhhhcc
Q 018767 188 ILYACVQVPITVVGAFLMDK 207 (350)
Q Consensus 188 ~~~~~~~~~~~~~~g~l~d~ 207 (350)
+...+++++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 44556677777777777654
No 335
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.70 E-value=2.7e+02 Score=24.53 Aligned_cols=20 Identities=15% Similarity=0.056 Sum_probs=8.8
Q ss_pred HHhhhHHhhHhhhhcccCCc
Q 018767 192 CVQVPITVVGAFLMDKSGRR 211 (350)
Q Consensus 192 ~~~~~~~~~~g~l~d~~grr 211 (350)
+...+....+|-+-.|.|-|
T Consensus 338 lTs~i~GY~~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 338 LTSPINGYVSGSFYARLGGR 357 (593)
T ss_pred hcccccccccceeeehhccH
Confidence 33333334444444555533
No 336
>COG1422 Predicted membrane protein [Function unknown]
Probab=28.19 E-value=99 Score=23.48 Aligned_cols=13 Identities=31% Similarity=0.156 Sum_probs=5.6
Q ss_pred hHHHhhchHHHHH
Q 018767 65 RILALTGLVPCVL 77 (350)
Q Consensus 65 r~~f~~~~~~~~~ 77 (350)
+.+.++..+.+++
T Consensus 44 ~~p~lvilV~avi 56 (201)
T COG1422 44 LPPHLVILVAAVI 56 (201)
T ss_pred cccHHHHHHHHHH
Confidence 4444444444444
No 337
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=27.75 E-value=2.6e+02 Score=20.75 Aligned_cols=26 Identities=12% Similarity=0.203 Sum_probs=14.0
Q ss_pred HHhhhHHhhHhhhhcccCCceeehhh
Q 018767 192 CVQVPITVVGAFLMDKSGRRPLIMIS 217 (350)
Q Consensus 192 ~~~~~~~~~~g~l~d~~grr~~~~~~ 217 (350)
+...+.-.+.|++.-|++.++...-+
T Consensus 124 ~~~~~~L~ilG~~~a~~s~~~~~~s~ 149 (169)
T TIGR00267 124 LLTLIALLVLGVYLGRISRENILISS 149 (169)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 33444445566666666666555433
No 338
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=26.35 E-value=2.4e+02 Score=21.86 Aligned_cols=85 Identities=16% Similarity=0.095 Sum_probs=45.5
Q ss_pred CceehhhhHhhhhhccccccchhhhhhhc--ccCccchhhHHhHHHHHHHHHHHHHHHhcCCc-hhhHHHhhchHHHHHH
Q 018767 2 DLCYLTLEDFSTGYGIGVFSYVVPIFIAE--IAPRNLRGLLTTLNQLLIVTGSSVAYIIGSII-PWRILALTGLVPCVLL 78 (350)
Q Consensus 2 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~~--~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~-~Wr~~f~~~~~~~~~~ 78 (350)
+.+.++..-++.|+......|...++..+ ..++.+..+..-....+.++|..++--+-..+ +|+..+++.....+ .
T Consensus 61 ~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi~g~~l~~~l~~~Y~l-~ 139 (212)
T PF07556_consen 61 SLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRIIFGIPLWYFLIPGYIL-V 139 (212)
T ss_pred CcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH-H
Confidence 56788889999999999999987776543 23333333333333444444444443333333 66654443322222 2
Q ss_pred HHHHhccCC
Q 018767 79 LVGLCFVPE 87 (350)
Q Consensus 79 ~~~~~~~~e 87 (350)
+++.++.||
T Consensus 140 ~~l~~f~p~ 148 (212)
T PF07556_consen 140 LILTFFSPE 148 (212)
T ss_pred HHHHHhcCH
Confidence 333445553
No 339
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=25.50 E-value=2e+02 Score=21.98 Aligned_cols=28 Identities=14% Similarity=0.046 Sum_probs=19.5
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHhcCCc
Q 018767 35 NLRGLLTTLNQLLIVTGSSVAYIIGSII 62 (350)
Q Consensus 35 ~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 62 (350)
++.+++.++...+..+|.++|..+..++
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l 164 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWL 164 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3447777777777777777777776555
No 340
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.96 E-value=34 Score=18.94 Aligned_cols=11 Identities=9% Similarity=0.280 Sum_probs=4.4
Q ss_pred Hhhheeeeccc
Q 018767 324 TVLFVAKFVPE 334 (350)
Q Consensus 324 ~~~~~~~~~~~ 334 (350)
.+++.+.+.|+
T Consensus 23 ~gi~~w~~~~~ 33 (49)
T PF05545_consen 23 IGIVIWAYRPR 33 (49)
T ss_pred HHHHHHHHccc
Confidence 33334444443
No 341
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.43 E-value=5e+02 Score=22.95 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=21.1
Q ss_pred HHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 191 ACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 191 ~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
++..+.-++.+-++.+.+.++++..+=.++.+++.+++
T Consensus 301 giLFI~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lF 338 (430)
T PF06123_consen 301 GILFIGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLF 338 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 33334444555667777777777655554444444443
No 342
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.34 E-value=2.2e+02 Score=18.91 Aligned_cols=9 Identities=11% Similarity=-0.260 Sum_probs=3.9
Q ss_pred hhcccCCce
Q 018767 204 LMDKSGRRP 212 (350)
Q Consensus 204 l~d~~grr~ 212 (350)
+-++++-++
T Consensus 66 LD~~~~t~~ 74 (100)
T TIGR02230 66 LDRHYPSPF 74 (100)
T ss_pred HHhhcCCCc
Confidence 333455444
No 343
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=24.32 E-value=1e+02 Score=14.94 Aligned_cols=11 Identities=36% Similarity=0.458 Sum_probs=3.7
Q ss_pred HHHhccCCChH
Q 018767 80 VGLCFVPESPR 90 (350)
Q Consensus 80 ~~~~~~~esp~ 90 (350)
....+.+|+|+
T Consensus 18 ffAI~FRePPr 28 (29)
T PF01405_consen 18 FFAIFFREPPR 28 (29)
T ss_dssp HHHHHSS----
T ss_pred HhhhhccCCCC
Confidence 33455678774
No 344
>COG2119 Predicted membrane protein [Function unknown]
Probab=23.93 E-value=1.4e+02 Score=22.41 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=27.8
Q ss_pred HHHHHHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHH
Q 018767 187 TILYACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGC 225 (350)
Q Consensus 187 ~~~~~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 225 (350)
.....++.+++...+.++++|+..|.+..++.+++.+..
T Consensus 140 ~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 140 TLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 334456677777888899999999988877666554443
No 345
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.52 E-value=7.3e+02 Score=25.54 Aligned_cols=19 Identities=26% Similarity=0.403 Sum_probs=12.3
Q ss_pred CchhhHHHhhchHHHHHHH
Q 018767 61 IIPWRILALTGLVPCVLLL 79 (350)
Q Consensus 61 ~~~Wr~~f~~~~~~~~~~~ 79 (350)
..+||....+.+...++.+
T Consensus 805 ~~~W~lalv~la~~Pll~~ 823 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLIL 823 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3399998877665544433
No 346
>PF15050 SCIMP: SCIMP protein
Probab=23.45 E-value=28 Score=23.55 Aligned_cols=11 Identities=27% Similarity=0.193 Sum_probs=6.5
Q ss_pred hhHHHhhchHH
Q 018767 64 WRILALTGLVP 74 (350)
Q Consensus 64 Wr~~f~~~~~~ 74 (350)
||--||+..+.
T Consensus 4 Wr~nFWiiLAV 14 (133)
T PF15050_consen 4 WRDNFWIILAV 14 (133)
T ss_pred HHhchHHHHHH
Confidence 77777664433
No 347
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=23.25 E-value=1.9e+02 Score=22.60 Aligned_cols=48 Identities=15% Similarity=-0.016 Sum_probs=24.2
Q ss_pred hhhHHHhhchHHHHHHHHHHhc--cCCChHHHHHhCChHHHHHHHHHHhc
Q 018767 63 PWRILALTGLVPCVLLLVGLCF--VPESPRWLAKVGLDKEFQVALRKLRG 110 (350)
Q Consensus 63 ~Wr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~ 110 (350)
++.|.+.+.+++..+......+ --|.-.|-.-+++...+...++.+++
T Consensus 50 ~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 5445555555543332222222 23334455556666677777776643
No 348
>COG3462 Predicted membrane protein [Function unknown]
Probab=22.13 E-value=2.5e+02 Score=18.86 Aligned_cols=8 Identities=13% Similarity=0.164 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q 018767 99 KEFQVALR 106 (350)
Q Consensus 99 ~~~~~~~~ 106 (350)
+.|.+.++
T Consensus 88 sRA~eIlk 95 (117)
T COG3462 88 SRAEEILK 95 (117)
T ss_pred cHHHHHHH
Confidence 33444433
No 349
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=22.05 E-value=69 Score=18.60 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=14.9
Q ss_pred hhhHHHhhchHHHHHHHHH
Q 018767 63 PWRILALTGLVPCVLLLVG 81 (350)
Q Consensus 63 ~Wr~~f~~~~~~~~~~~~~ 81 (350)
|||...++++.++++.+.+
T Consensus 4 g~r~~~~~ggfVg~iG~a~ 22 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAAL 22 (58)
T ss_pred cccchhhHHHHHHHHHHHH
Confidence 7999988888888875544
No 350
>PRK11715 inner membrane protein; Provisional
Probab=21.43 E-value=5.8e+02 Score=22.62 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=21.6
Q ss_pred HHHhhhHHhhHhhhhcccCCceeehhhhHHHHHHHHHH
Q 018767 191 ACVQVPITVVGAFLMDKSGRRPLIMISAAGTFLGCFLA 228 (350)
Q Consensus 191 ~~~~~~~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~ 228 (350)
++..+.-++.+-++.+...++++..+=.++.+++..++
T Consensus 307 giLFI~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lF 344 (436)
T PRK11715 307 AILFIALTFAAFFLFELLKKLRIHPVQYLLVGLALVLF 344 (436)
T ss_pred HHHHHHHHHHHHHHHHHhcCceecHHHHHHHHHHHHHH
Confidence 33334444555667788888877655555544444443
No 351
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.35 E-value=1.2e+02 Score=22.07 Aligned_cols=24 Identities=13% Similarity=0.275 Sum_probs=14.1
Q ss_pred hhhhhhcccchhHHHHHHHHHHHH
Q 018767 136 SIRDLFKSKYIRSVIIGVSLMVLQ 159 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
.+.+...++..+++.+.+.+-.+.
T Consensus 52 ~IP~~Vs~RM~rRm~~~~GiP~~l 75 (153)
T PF11947_consen 52 AIPEVVSNRMLRRMAVFVGIPTAL 75 (153)
T ss_pred ccCHHHHHHHHHHHHHHhchHHHH
Confidence 444556666667777655555443
No 352
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=20.20 E-value=1.3e+02 Score=14.75 Aligned_cols=10 Identities=10% Similarity=0.096 Sum_probs=6.3
Q ss_pred HHhccCCChH
Q 018767 81 GLCFVPESPR 90 (350)
Q Consensus 81 ~~~~~~esp~ 90 (350)
...+.+|+|+
T Consensus 19 FAIfFRepPr 28 (31)
T PRK11875 19 FAIAFRDPPK 28 (31)
T ss_pred HhhhccCCCC
Confidence 3455678775
No 353
>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane
Probab=20.17 E-value=1e+02 Score=18.45 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=20.3
Q ss_pred ccchhhhhhhcccCccchhhHHhHHHHHHHH
Q 018767 20 FSYVVPIFIAEIAPRNLRGLLTTLNQLLIVT 50 (350)
Q Consensus 20 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 50 (350)
.+|....+.-...|++.|-...++.+.+++.
T Consensus 30 ~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~ 60 (68)
T PF04117_consen 30 FWPPAQIVNFRYVPPHYRVLFVNVVSFFWNT 60 (68)
T ss_pred hHHHHHHHHhcccChhhhhhhhhhHHHHHHH
Confidence 4566666666677777777777766665543
Done!