Query 018769
Match_columns 350
No_of_seqs 206 out of 1668
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 05:46:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z84_A Galactose-1-phosphate u 100.0 2.3E-90 7.8E-95 670.0 30.8 338 1-348 1-350 (351)
2 1gup_A Galactose-1-phosphate u 100.0 3.1E-86 1E-90 641.3 30.7 317 10-347 6-339 (348)
3 3o0m_A HIT family protein; ssg 100.0 8.1E-29 2.8E-33 211.7 11.5 130 212-346 5-139 (149)
4 3ksv_A Uncharacterized protein 99.9 1.1E-27 3.7E-32 204.7 11.1 131 212-346 11-145 (149)
5 3imi_A HIT family protein; str 99.9 3.4E-27 1.2E-31 201.1 10.9 132 211-346 8-145 (147)
6 3l7x_A SMU.412C, putative HIT- 99.9 6.9E-27 2.4E-31 204.3 11.2 132 211-346 35-170 (173)
7 3lb5_A HIT-like protein involv 99.9 8.1E-27 2.8E-31 201.7 11.5 131 211-346 27-160 (161)
8 1y23_A HIT, histidine triad pr 99.9 7.9E-27 2.7E-31 198.2 9.2 133 211-347 4-142 (145)
9 2eo4_A 150AA long hypothetical 99.9 5.7E-26 1.9E-30 193.9 11.1 129 214-346 1-135 (149)
10 3o1c_A Histidine triad nucleot 99.9 1.1E-25 3.8E-30 186.9 6.6 115 199-318 3-120 (126)
11 3ano_A AP-4-A phosphorylase; d 99.9 1.1E-24 3.7E-29 196.6 12.7 131 211-346 68-205 (218)
12 3r6f_A HIT family protein; str 99.9 2.9E-25 9.8E-30 186.6 7.5 126 211-346 5-132 (135)
13 4egu_A Histidine triad (HIT) p 99.9 1.3E-24 4.3E-29 178.6 7.6 110 211-326 3-117 (119)
14 3p0t_A Uncharacterized protein 99.9 4E-24 1.4E-28 180.2 10.3 125 212-346 5-133 (138)
15 3n1s_A HIT-like protein HINT; 99.9 2.8E-24 9.7E-29 176.6 8.2 103 212-318 3-109 (119)
16 1xqu_A HIT family hydrolase; p 99.9 2.8E-24 9.5E-29 183.0 8.3 104 210-318 33-141 (147)
17 3oj7_A Putative histidine tria 99.9 4.9E-24 1.7E-28 174.6 9.2 100 214-318 9-111 (117)
18 2oik_A Histidine triad (HIT) p 99.9 6E-23 2.1E-27 176.1 13.0 126 211-346 9-139 (154)
19 1fit_A FragIle histidine prote 99.9 1.6E-21 5.6E-26 165.8 11.1 93 223-319 13-105 (147)
20 1ems_A Nitfhit, NIT-fragIle hi 99.8 2.9E-20 9.8E-25 184.7 11.4 105 211-319 296-401 (440)
21 3ohe_A Histidine triad (HIT) p 99.6 1.7E-15 5.9E-20 127.1 11.8 113 225-346 15-132 (137)
22 3i24_A HIT family hydrolase; s 99.6 4.5E-15 1.5E-19 126.2 11.4 113 225-346 15-132 (149)
23 3nrd_A Histidine triad (HIT) p 99.5 7.1E-14 2.4E-18 116.9 11.7 85 225-319 17-102 (135)
24 3i4s_A Histidine triad protein 99.5 3.2E-13 1.1E-17 114.7 11.7 112 225-346 20-137 (149)
25 3sp4_A Aprataxin-like protein; 98.9 1.6E-09 5.5E-14 95.8 6.8 82 225-314 23-123 (204)
26 3oj7_A Putative histidine tria 98.2 6.7E-07 2.3E-11 72.3 4.4 101 52-192 8-111 (117)
27 3bl9_A Scavenger mRNA-decappin 98.1 7.4E-06 2.5E-10 76.2 9.1 107 225-344 153-270 (301)
28 4egu_A Histidine triad (HIT) p 98.1 1.9E-06 6.5E-11 69.7 4.1 105 51-194 4-112 (119)
29 1vlr_A MRNA decapping enzyme; 98.1 9.4E-06 3.2E-10 76.6 9.2 108 224-344 199-317 (350)
30 3o0m_A HIT family protein; ssg 98.1 7E-06 2.4E-10 69.2 7.5 102 51-189 5-108 (149)
31 3lb5_A HIT-like protein involv 98.0 5.7E-06 1.9E-10 70.7 6.1 103 50-189 27-130 (161)
32 3o1c_A Histidine triad nucleot 97.9 4.3E-06 1.5E-10 68.4 3.2 103 50-191 14-119 (126)
33 2eo4_A 150AA long hypothetical 97.9 1.4E-05 4.9E-10 67.1 6.2 67 122-189 35-101 (149)
34 3imi_A HIT family protein; str 97.9 9.9E-06 3.4E-10 68.1 4.8 103 51-189 9-111 (147)
35 1y23_A HIT, histidine triad pr 97.8 1.1E-05 3.6E-10 67.5 3.2 102 51-189 5-107 (145)
36 3l7x_A SMU.412C, putative HIT- 97.8 2.1E-05 7.2E-10 68.0 4.7 102 51-189 36-138 (173)
37 3ksv_A Uncharacterized protein 97.7 0.00015 5.3E-09 60.9 9.2 102 51-188 11-112 (149)
38 3n1s_A HIT-like protein HINT; 97.7 3.2E-05 1.1E-09 62.6 4.6 102 51-192 3-109 (119)
39 3ano_A AP-4-A phosphorylase; d 97.7 3.1E-05 1.1E-09 69.3 4.6 102 51-189 69-173 (218)
40 1xqu_A HIT family hydrolase; p 97.7 3.1E-05 1.1E-09 65.1 4.2 101 51-190 35-139 (147)
41 1ems_A Nitfhit, NIT-fragIle hi 97.6 0.00031 1.1E-08 69.1 11.0 100 50-189 296-397 (440)
42 3r6f_A HIT family protein; str 97.4 5E-05 1.7E-09 62.8 2.7 94 51-189 6-100 (135)
43 1z84_A Galactose-1-phosphate u 97.2 0.0013 4.3E-08 63.0 9.9 99 212-314 61-190 (351)
44 1fit_A FragIle histidine prote 97.0 0.0028 9.5E-08 52.8 8.7 69 121-190 34-102 (147)
45 2oik_A Histidine triad (HIT) p 96.6 0.0035 1.2E-07 52.6 6.5 59 122-189 42-103 (154)
46 3p0t_A Uncharacterized protein 96.4 0.0026 8.8E-08 52.4 4.5 94 51-189 5-102 (138)
47 3ohe_A Histidine triad (HIT) p 94.8 0.092 3.1E-06 43.1 7.7 62 122-189 35-96 (137)
48 3nrd_A Histidine triad (HIT) p 94.3 0.12 4E-06 42.3 7.2 63 122-189 36-98 (135)
49 3i24_A HIT family hydrolase; s 93.5 0.16 5.6E-06 42.2 6.7 62 122-189 35-96 (149)
50 3i4s_A Histidine triad protein 92.5 0.33 1.1E-05 40.4 7.2 63 122-189 39-101 (149)
51 1gup_A Galactose-1-phosphate u 87.3 0.7 2.4E-05 43.7 5.6 66 123-189 232-301 (348)
52 2pof_A CDP-diacylglycerol pyro 73.4 4.4 0.00015 35.8 5.2 69 225-295 33-107 (227)
53 3g2b_A Coenzyme PQQ synthesis 58.7 7.5 0.00026 29.4 3.3 33 3-35 8-40 (95)
54 1vr7_A Adometdc, samdc, S-aden 33.2 1E+02 0.0035 25.0 6.4 90 255-349 22-114 (142)
55 3hr5_R M1prime-derived peptide 31.8 15 0.00052 21.6 0.8 12 174-185 23-34 (35)
56 3sp4_A Aprataxin-like protein; 30.4 17 0.00057 31.6 1.2 44 169-217 104-147 (204)
57 2iii_A S-adenosylmethionine de 25.8 1.1E+02 0.0039 24.4 5.4 64 282-349 37-103 (135)
No 1
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=100.00 E-value=2.3e-90 Score=670.01 Aligned_cols=338 Identities=67% Similarity=1.200 Sum_probs=287.1
Q ss_pred CCCCCCC---------CCCCCCCeeeccCCCCeEEEEccccCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCceecc
Q 018769 1 MASPSST---------QTQSRSPEIRKDPVNNRWVIFSPARAKRPTDFKAKSPQ-NPNSSSSCPFCIGNEHECAPEIFRV 70 (350)
Q Consensus 1 ~~~~~~~---------~~~~~~~e~R~dpltg~~viia~~R~~RP~~~~~~~~~-~~~~~~~CPFC~g~e~~t~~ei~~~ 70 (350)
|+||+-+ .....|+|+|||||||+||+||++|++|||+++.+... ....+..|||||||++.|++|+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~e~R~npltg~wv~vs~~R~~RP~~~~~~~~~~~~~~~~~CpfCpg~~~~t~~e~~~~ 80 (351)
T 1z84_A 1 MTSPSHASDRGGGDGDSVENQSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNPKPSSCPFCIGREQECAPELFRV 80 (351)
T ss_dssp ---------------------CCEEEEETTTTEEEEECC----CGGGCCCCCC-------CCCTTSTTCGGGSSCEEEEE
T ss_pred CCCcccccccCCCCCCCCccCCCceEECCcCCcEEEEeCCCCCCCCCCcccccccccCCCCCCcCCCCCcccCCcccccc
Confidence 6777755 33567999999999999999999999999998654421 1112347999999999999988776
Q ss_pred CC-CCCCCcEEEEEecCCCcc-ccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCCCCCCCcCCCCHHHHHHHHH
Q 018769 71 PP-DPKSDWKIRVIQNLYPAL-SRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESPVHSVQLQDLEPREVGEVLL 148 (350)
Q Consensus 71 ~~-~~~~~w~~~v~~N~fP~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp~H~~~l~~~~~~~~~~~l~ 148 (350)
.. ++ +|+++||+||||+| +.+.+... .+ .+++|+.++|+|+|+||||||+|+.+|++||.+++..++.
T Consensus 81 ~~~~~--~~~~~v~~N~fP~l~~~~~~~~~-~~-------~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls~~e~~~vi~ 150 (351)
T 1z84_A 81 PDHDP--NWKLRVIENLYPALSRNLETQST-QP-------ETGTSRTIVGFGFHDVVIESPVHSIQLSDIDPVGIGDILI 150 (351)
T ss_dssp STTCS--SCSEEEEECSSCSSBGGGTTTC----------------CEEECBCEEEEEECCSSSSCCGGGSCHHHHHHHHH
T ss_pred cccCC--CceEEEEcCCCccccCCCCCccc-cc-------ccchhhccccCcceEEEEeCCCCCCCcHHCCHHHHHHHHH
Confidence 42 24 79999999999999 66543221 01 1137899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceecCCCCChHHHHHHHHHHHHHhhcCCCccccccCCCeEEEe
Q 018769 149 ACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLALPVIPPTISARINSTKEYFDQTGKCCLCEVQPKDLQIDV 228 (350)
Q Consensus 149 ~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~~~~p~~~~~~~~~~~~y~~~~g~c~fc~ii~~E~iV~e 228 (350)
+|++|+++|+++++++||+||||+|+.|||||.|||+||||++++|+.++++++++++||+++++|+||+|+++|++|+|
T Consensus 151 ~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~~~~ciFc~ii~~E~iV~E 230 (351)
T 1z84_A 151 AYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDE 230 (351)
T ss_dssp HHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHHHSSCTTTTHHHHSEEEEE
T ss_pred HHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhhcCCCHHHHHHhcCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCCCceece
Q 018769 229 TTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDTQLAYIH 308 (350)
Q Consensus 229 ~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~~~~~~H 308 (350)
|++|+||+|++|++|||+||+||+|+.+|.+|+++++.+|+.++++++++|++.++.++||+++|++|.+++...+.++|
T Consensus 231 ~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~yn~~~n~gp~~g~~~~q~v~H 310 (351)
T 1z84_A 231 SSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIHTSPLKVTESQLPYTH 310 (351)
T ss_dssp CSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECCCTTCCGGGGGGCC
T ss_pred CCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCCccCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999889999999999875311157999
Q ss_pred EEEEEecCCCCCccccccccCCCCCCcHHHHHHHHHhccC
Q 018769 309 WFLQIVPQLAGVGGFEIGTGCYINPVFSEDAAKVMQEVNV 348 (350)
Q Consensus 309 ~HihiiPR~~~~aG~El~~g~~in~~~PE~aA~~Lr~~~~ 348 (350)
||+||+||++.++|||++++.++|+++||++|++||++.+
T Consensus 311 lHiHiiPR~~~~~Gfe~~~~~~i~~~~pE~~A~~LR~~~~ 350 (351)
T 1z84_A 311 WFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSL 350 (351)
T ss_dssp CEEEEEECCCCCCHHHHHHSCCEESSCHHHHHHHHHHCCC
T ss_pred EEEEEEccCCCcCccccccCcccCCccHHHHHHHHHhccC
Confidence 9999999999999999988899999999999999998764
No 2
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=100.00 E-value=3.1e-86 Score=641.26 Aligned_cols=317 Identities=25% Similarity=0.421 Sum_probs=284.6
Q ss_pred CCCCCeeeccCCCCeEEEEccccCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCceeccCCCCCCCcE-EEEEec
Q 018769 10 QSRSPEIRKDPVNNRWVIFSPARAKRPTDFKAKSPQN---PNSSSSCPFCIGNEHECAPEIFRVPPDPKSDWK-IRVIQN 85 (350)
Q Consensus 10 ~~~~~e~R~dpltg~~viia~~R~~RP~~~~~~~~~~---~~~~~~CPFC~g~e~~t~~ei~~~~~~~~~~w~-~~v~~N 85 (350)
.+.|+|+|+|||||+||+||++|++|||+++.++... +..+..|||||||++.|++. ++ +|+ +|||+|
T Consensus 6 ~~~~~~~R~npltg~wv~vs~~R~~RP~~~~~~~~~~~~~p~~~~~CpfCpg~~~~t~~~------~p--~~~~~~v~~N 77 (348)
T 1gup_A 6 PVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDK------NP--DYTGTYVFTN 77 (348)
T ss_dssp TTTSCEEEEETTTTEEEEECTTGGGSCCCSCCCCCCCSCCCSCCTTCTTSTTCBCTTSCB------CC--CCSSCEEEEC
T ss_pred CCCCCceEECCcCCcEEEEeCCCCCCCCCCccccccccCCCCCCCCCCCCCCCcccCCCC------CC--CCceEEEecC
Confidence 4579999999999999999999999999997554321 12234699999999987642 25 798 999999
Q ss_pred CCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccE
Q 018769 86 LYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKY 165 (350)
Q Consensus 86 ~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~y 165 (350)
|||+|+.+.+.... + ..++|++++++|.|+||||||+|+.+|++||.+++..+|.+|++|+++|+ ++++|
T Consensus 78 ~fpal~~~~~~~~~-~-------~~~l~~~~~~~G~~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~--~~~~y 147 (348)
T 1gup_A 78 DFAALMSDTPDAPE-S-------HDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELG--KTYPW 147 (348)
T ss_dssp TTCSCCTTCCCCCC-C-------CCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHH--HHCSE
T ss_pred CCceeccCCCCccc-c-------CccceecCccceeEEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHh--hcCCE
Confidence 99999876433211 0 12379999999999999999999999999999999999999999999998 78999
Q ss_pred EEEecccCccCCCCCcccccceecCCCCChHHHHHHHHHHHHHhhcCCCccccccCCC-----eEEEecCcEEEEecCCC
Q 018769 166 VQVFKNHGASAGASMSHSHSQLLALPVIPPTISARINSTKEYFDQTGKCCLCEVQPKD-----LQIDVTTHFISIVPFAA 240 (350)
Q Consensus 166 v~iFkN~G~~aGaSl~HpH~Qi~a~~~~p~~~~~~~~~~~~y~~~~g~c~fc~ii~~E-----~iV~e~~~~iaf~p~~p 240 (350)
|+||||+|+.|||||.|||+||||++++|..++++++++++||+++++|+||+|+++| .+|+||++|+||+|++|
T Consensus 148 V~iF~N~G~~~G~Sl~HpH~Qi~a~~~~p~~~~~e~~~~~~y~~~~~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p 227 (348)
T 1gup_A 148 VQVFENKGAAMGCSNPHPGGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWA 227 (348)
T ss_dssp EEEEEEESGGGTCSCCSSEEEEEEESSCCHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTC
T ss_pred EEEecccCCcCCcCCCCCceeEEecccCChHHHHHHHHHHHHHhcCCCCchhHHHhhccccCceEEEeCCcEEEEEccCC
Confidence 9999999999999999999999999999999999999999999999999999999866 39999999999999999
Q ss_pred CCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCC-CeEEEEEcCCCCccCCCceeceEEEEEec---C
Q 018769 241 TFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNP-PFNFMIQTAPLQAIDTQLAYIHWFLQIVP---Q 316 (350)
Q Consensus 241 ~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~-~yN~~~~~~p~~~~~~~~~~~H~HihiiP---R 316 (350)
++|||+||+||+|+.+|.+|+++++.+|+.+++++++++++.++.+ +||+++|.+|.++. ++.++|||+||+| |
T Consensus 228 ~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~--~q~v~HlHiHiiPpl~R 305 (348)
T 1gup_A 228 AWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGE--ENQHWQLHAHFYPPLLR 305 (348)
T ss_dssp CSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSS--CCTTCCCEEEEECCBCS
T ss_pred CCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCC--CCcccEEEEEEecchhc
Confidence 9999999999999999999999999999999999999999999987 99999999998764 3679999999999 7
Q ss_pred CC----CCccccccccCCCCCCcHHHHHHHHHhcc
Q 018769 317 LA----GVGGFEIGTGCYINPVFSEDAAKVMQEVN 347 (350)
Q Consensus 317 ~~----~~aG~El~~g~~in~~~PE~aA~~Lr~~~ 347 (350)
+. +++|||++++.+ ++++||++|++||++.
T Consensus 306 ~~~~~~~~~g~e~~~~~~-~~~~pE~~A~~Lr~~~ 339 (348)
T 1gup_A 306 SATVRKFMVGYEMLAETQ-RDLTAEQAAERLRAVS 339 (348)
T ss_dssp SSSCBCCCCTHHHHTCCE-ESSCHHHHHHHHHTSC
T ss_pred cCCcccceeeEecccCCC-CCCCHHHHHHHHHhhh
Confidence 64 458999998887 9999999999999864
No 3
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.96 E-value=8.1e-29 Score=211.70 Aligned_cols=130 Identities=16% Similarity=0.287 Sum_probs=113.7
Q ss_pred CCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHH-cCCCC
Q 018769 212 GKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQ-LNNPP 287 (350)
Q Consensus 212 g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~-~~~~~ 287 (350)
..|+||+|+++|+ +||||+.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++. ++..+
T Consensus 5 ~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~ 84 (149)
T 3o0m_A 5 MSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHADG 84 (149)
T ss_dssp TTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCSE
T ss_pred CCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 5799999999986 9999999999999999999999999999999999999999999999999999999988 88889
Q ss_pred eEEEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccCCCCCCc-HHHHHHHHHhc
Q 018769 288 FNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVF-SEDAAKVMQEV 346 (350)
Q Consensus 288 yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~in~~~-PE~aA~~Lr~~ 346 (350)
||+++|++|.+|+ .++|||+||+||++.- ||+++++..+++.. .|++|++||++
T Consensus 85 ~ni~~n~g~~aGq----~v~HlHiHiiPR~~~d-~~~~~~~~~~~~~~~l~~~a~~lr~~ 139 (149)
T 3o0m_A 85 NNIAINDGKAAFQ----TVFHIHLHVVPRRNGD-KLSFAKGMVMRRDPDREESGRLLRAA 139 (149)
T ss_dssp EEEECCCSGGGTC----CSSSCCEEEEEECTTC-CCCC------CCCTTHHHHHHHHHHH
T ss_pred eEEEEecCCCCCC----ccceEEEEEECCccCC-CcccccCcccCChHHHHHHHHHHHHH
Confidence 9999999997764 6899999999999864 89988877665544 48999999975
No 4
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.95 E-value=1.1e-27 Score=204.65 Aligned_cols=131 Identities=22% Similarity=0.363 Sum_probs=114.4
Q ss_pred CCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCe
Q 018769 212 GKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPF 288 (350)
Q Consensus 212 g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~y 288 (350)
..|+||+|+++|+ +||||+.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+|
T Consensus 11 ~~~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~g~ 90 (149)
T 3ksv_A 11 ANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQY 90 (149)
T ss_dssp TTCHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCCEE
T ss_pred ccCHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 4799999999997 9999999999999999999999999999999999999999999999999999999999988899
Q ss_pred EEEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccC-CCCCCcHHHHHHHHHhc
Q 018769 289 NFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGC-YINPVFSEDAAKVMQEV 346 (350)
Q Consensus 289 N~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~-~in~~~PE~aA~~Lr~~ 346 (350)
|+++|++|.+|+ +++|+|+||+||+...+||++..+. ...+...++.+++||++
T Consensus 91 ni~~n~g~~aGq----~v~HlHiHiiPR~~~d~g~~~~w~~~~~~~~~l~~~~~~lr~~ 145 (149)
T 3ksv_A 91 NVLQNNGSLAHQ----EVPHVHFHIIPKTDEKTGLKIGWDTVKVASDELAEDAKRYSEA 145 (149)
T ss_dssp EEEECCSTTTTC----CSSSCCEEEEEECCTTSSCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEecCcccCC----CCCEEEEEEEecccCCCCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999998764 6899999999999987888864322 12223445677777754
No 5
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.94 E-value=3.4e-27 Score=201.13 Aligned_cols=132 Identities=14% Similarity=0.270 Sum_probs=114.3
Q ss_pred cCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018769 211 TGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPP 287 (350)
Q Consensus 211 ~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~ 287 (350)
.+.|+||+|+++|+ +|||++.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+
T Consensus 8 m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~ 87 (147)
T 3imi_A 8 ADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPVG 87 (147)
T ss_dssp GGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCCSE
T ss_pred cCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45799999999987 999999999999999999999999999999999999999999999999999999999999889
Q ss_pred eEEEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccCC---CCCCcHHHHHHHHHhc
Q 018769 288 FNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCY---INPVFSEDAAKVMQEV 346 (350)
Q Consensus 288 yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~---in~~~PE~aA~~Lr~~ 346 (350)
||+++|+++.+|+ .++|+|+||+||+....||+...+.- ..+...++++++||++
T Consensus 88 ~ni~~n~g~~aGq----~v~HlHiHiiPR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 145 (147)
T 3imi_A 88 FNLLNNNGEKAGQ----TVFHFHLHLIPRYGENDGFGAVWKSHQNEYTMENLQNIASTIANS 145 (147)
T ss_dssp EEEEEEESGGGTC----CSSSCCEEEEEECSTTCSEEEEECCCGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcccCC----CcCEEEEEEeCCccCCCCceeeccccCCCCCHHHHHHHHHHHHHh
Confidence 9999999998764 68999999999999778887543221 1123345677777764
No 6
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.94 E-value=6.9e-27 Score=204.27 Aligned_cols=132 Identities=14% Similarity=0.228 Sum_probs=113.4
Q ss_pred cCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018769 211 TGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPP 287 (350)
Q Consensus 211 ~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~ 287 (350)
.++|+||+|+++|+ +||||+.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+
T Consensus 35 m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~g 114 (173)
T 3l7x_A 35 MNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKADG 114 (173)
T ss_dssp CTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCSE
T ss_pred CCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45799999999886 999999999999999999999999999999999999999999999999999999999999889
Q ss_pred eEEEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccCC-CCCCcHHHHHHHHHhc
Q 018769 288 FNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCY-INPVFSEDAAKVMQEV 346 (350)
Q Consensus 288 yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~-in~~~PE~aA~~Lr~~ 346 (350)
||+++|++|..|+ .++|||+||+||+....||+...+.. ......++.+++||++
T Consensus 115 ~ni~~n~g~~aGq----~V~HlHiHiIPR~~~d~gf~~~~~~~~~~~~~l~~~~~~ir~~ 170 (173)
T 3l7x_A 115 LNIINNNEETAGQ----TVFHAHVHLVPRFADSDEFDIRFVQHEPDFTRLGQLAEDIQKE 170 (173)
T ss_dssp EEEEECCSGGGTC----CSCSCCEEEEEECC-CCSCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccCC----CcCEEEEEEEecccCCCCcccccCCCCCCHHHHHHHHHHHHHH
Confidence 9999999998764 68999999999998777887543221 1113345667777754
No 7
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.94 E-value=8.1e-27 Score=201.68 Aligned_cols=131 Identities=11% Similarity=0.211 Sum_probs=110.5
Q ss_pred cCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018769 211 TGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPP 287 (350)
Q Consensus 211 ~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~ 287 (350)
.++|+||+|+++|+ +||||+.|+||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+
T Consensus 27 ~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g 106 (161)
T 3lb5_A 27 DNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADG 106 (161)
T ss_dssp CTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 46899999999886 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccCCCCCCcHHHHHHHHHhc
Q 018769 288 FNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVFSEDAAKVMQEV 346 (350)
Q Consensus 288 yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~in~~~PE~aA~~Lr~~ 346 (350)
||+++|+++.+|+ .++|||+||+||+..- ++....+....+...++++++||++
T Consensus 107 ~ni~~n~g~~aGq----~V~HlHiHiiPR~~~d-~~~~~~~~~~~~~~l~~~~~~ir~~ 160 (161)
T 3lb5_A 107 ITVMQFNEAASQQ----TVYHLHFHIIPRMEGI-ELTPHNNIITPTEILEENAKKIRAA 160 (161)
T ss_dssp EEEEEEESGGGTC----CSCSCCEEEEEECTTC-CC------CCCHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccCC----CCCEEEEEEEcccCCC-CCCcCcccCCCHHHHHHHHHHHHHh
Confidence 9999999998764 6899999999998732 2222222333445566777888764
No 8
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.94 E-value=7.9e-27 Score=198.21 Aligned_cols=133 Identities=14% Similarity=0.241 Sum_probs=114.8
Q ss_pred cCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018769 211 TGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPP 287 (350)
Q Consensus 211 ~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~ 287 (350)
.+.|+||+|+++|+ +|+|++.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+
T Consensus 4 ~~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIG 83 (145)
T ss_dssp -CCCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSE
T ss_pred CCCCcCCccccCCCCCCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 36899999998876 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccCCCCCCcHH---HHHHHHHhcc
Q 018769 288 FNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVFSE---DAAKVMQEVN 347 (350)
Q Consensus 288 yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~in~~~PE---~aA~~Lr~~~ 347 (350)
||+++|++|..|+ .++|+|+||+||+....||++..+......++| ++|++||+..
T Consensus 84 ~ni~~n~g~~~g~----~v~HlH~HiiPr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l 142 (145)
T 1y23_A 84 LNTLNNNGEKAGQ----SVFHYHMHIIPRYGKGDGFGAVWKTHADDYKPEDLQNISSSIAKRL 142 (145)
T ss_dssp EEEEEEESGGGTC----CSSSCCEEEEEECSTTCSEEEEECCCGGGSCHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCcCCCC----CcCEEEEEEEccccCCCCcccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999987764 689999999999987778876532111224454 7888888653
No 9
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.93 E-value=5.7e-26 Score=193.92 Aligned_cols=129 Identities=16% Similarity=0.253 Sum_probs=110.6
Q ss_pred CccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEE
Q 018769 214 CCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNF 290 (350)
Q Consensus 214 c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~ 290 (350)
|+||+|+++|+ +|+|++.++||+|++|.+|||++|+||+|+.++.+|+++++.+|+.+++++.+++++.++..+||+
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni 80 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRL 80 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 99999999886 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCccCCCceeceEEEEEecCCCCCc-ccccccc--CCCCCCcHHHHHHHHHhc
Q 018769 291 MIQTAPLQAIDTQLAYIHWFLQIVPQLAGVG-GFEIGTG--CYINPVFSEDAAKVMQEV 346 (350)
Q Consensus 291 ~~~~~p~~~~~~~~~~~H~HihiiPR~~~~a-G~El~~g--~~in~~~PE~aA~~Lr~~ 346 (350)
++|++|..|+ .++|+|+||+||+..-. |+....+ ....+...++++++||++
T Consensus 81 ~~n~g~~~gq----~v~HlHiHviPr~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 135 (149)
T 2eo4_A 81 LTNIGRSAGQ----VIFHLHVHIIPTWEGDYPDIFKSFKPRKEQEKEYYELLQKIIRES 135 (149)
T ss_dssp ECCCSGGGTC----CSCSCCEEEEEECSSCCCTTSCCCCTTSCCCHHHHHHHHHHHHHH
T ss_pred EEecCcCCCC----CcCEEEEEEECCcCCCCcccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 9999998764 68999999999997533 3432211 113334556888888864
No 10
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.92 E-value=1.1e-25 Score=186.91 Aligned_cols=115 Identities=12% Similarity=0.165 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhhcCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHH
Q 018769 199 ARINSTKEYFDQTGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLT 275 (350)
Q Consensus 199 ~~~~~~~~y~~~~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v 275 (350)
.+++.+++|+ ..+.|+||+|+++|+ +||||+.++||.|++|.+|||+||+||+|+.++.+|++++..+|+++++.+
T Consensus 3 ~~~~~~~~~~-~~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~ 81 (126)
T 3o1c_A 3 DEIAKAQVAR-PGGDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVG 81 (126)
T ss_dssp ---------C-TTCSSHHHHHHHTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHH
T ss_pred chhhcccccC-CCCCCCcchhhcCCCcCCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHH
Confidence 4788899998 678999999999886 999999999999999999999999999999999999999998888888644
Q ss_pred HHHHHHHcCCCCeEEEEEcCCCCccCCCceeceEEEEEecCCC
Q 018769 276 LRKISVQLNNPPFNFMIQTAPLQAIDTQLAYIHWFLQIVPQLA 318 (350)
Q Consensus 276 ~~~l~~~~~~~~yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~ 318 (350)
.+.+++.....+||+++|.++.+| |+++|+|+||+||..
T Consensus 82 ~~~~~~~~~~~g~ni~~n~g~~ag----q~v~HlH~Hiipr~~ 120 (126)
T 3o1c_A 82 KKCAADLGLKKGYRMVVNEGSDGG----QSVYHVHLHVLGGRQ 120 (126)
T ss_dssp HHHHHHTTCTTCEEEECCCHHHHT----CCSSSCCEEEEESSC
T ss_pred HHHHHHhCCCCCeEEEEecCCccC----CccCEeEEEEeCCcc
Confidence 443443333359999999998766 469999999999964
No 11
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.1e-24 Score=196.62 Aligned_cols=131 Identities=15% Similarity=0.224 Sum_probs=113.4
Q ss_pred cCCCccccccCCC-e---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 018769 211 TGKCCLCEVQPKD-L---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNP 286 (350)
Q Consensus 211 ~g~c~fc~ii~~E-~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~ 286 (350)
.+.|+||+|+++| . +|+|++.++||++++|.+|||+||+||+|+.++.+|+++++.+|+.+++.+.+++++.++..
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4579999999875 3 99999999999999999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEcCCCCccCCCcee-ceEEEEEecCCCCCcccc--ccccCCCCCCcHHHHHHHHHhc
Q 018769 287 PFNFMIQTAPLQAIDTQLAY-IHWFLQIVPQLAGVGGFE--IGTGCYINPVFSEDAAKVMQEV 346 (350)
Q Consensus 287 ~yN~~~~~~p~~~~~~~~~~-~H~HihiiPR~~~~aG~E--l~~g~~in~~~PE~aA~~Lr~~ 346 (350)
+||+++|+++.+|+ .+ +|+|+||+||+...+||. ++. ..+++..+++++++||++
T Consensus 148 g~ni~~n~G~~aGq----~V~~HlHiHIIPR~~gd~~f~~v~g~-~~~~~~~l~~~~~~Lr~a 205 (218)
T 3ano_A 148 GFNVGLNLGTSAGG----SLAEHLHVHVVPRWGGDANFITIIGG-SKVIPQLLRDTRRLLATE 205 (218)
T ss_dssp EEEEEEEESGGGTC----TTTTSCCEEEEEECTTGGGCCCCC------CCHHHHHHHHHHHHH
T ss_pred CEEEEEecCcccCC----cccCEEEEEEEcccCCCCCccccccc-ccCCHHHHHHHHHHHHHH
Confidence 99999999998764 46 999999999998767775 232 235667789999999864
No 12
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.91 E-value=2.9e-25 Score=186.57 Aligned_cols=126 Identities=11% Similarity=0.169 Sum_probs=104.0
Q ss_pred cCCCccccccC-CCeEEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Q 018769 211 TGKCCLCEVQP-KDLQIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFN 289 (350)
Q Consensus 211 ~g~c~fc~ii~-~E~iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN 289 (350)
.++|+||+|++ ...+||||+.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+.+ +..+||
T Consensus 5 ~~~C~fC~i~~~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~----~~~~~n 80 (135)
T 3r6f_A 5 MEGCIFCTLYRKGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKF----GFERYN 80 (135)
T ss_dssp -CCCHHHHHHHHCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHH----TCCSEE
T ss_pred CCCCcCcccccCCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHh----CCCCeE
Confidence 36799999987 3349999999999999999999999999999999999999999999999998887764 567899
Q ss_pred EEEEcCCCCccCCCceeceEEEEEecCCCCCccccccccC-CCCCCcHHHHHHHHHhc
Q 018769 290 FMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGC-YINPVFSEDAAKVMQEV 346 (350)
Q Consensus 290 ~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~-~in~~~PE~aA~~Lr~~ 346 (350)
+++|+++ + +.++|+|+||+||++..+||++..+. ...+...++.|++||++
T Consensus 81 i~~n~g~--g----q~v~HlH~HiiPR~~~d~g~~~~~~~~~~~~~~l~~~~~~ir~~ 132 (135)
T 3r6f_A 81 ILQNNGN--H----QEVFHVHFHVIPFVSADERLMINWKAKSVSDKEYSEMVEEARLR 132 (135)
T ss_dssp EECCSSS--S----CSSSSCCEEEEECCBTTBSCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEcCC--C----CCccEEEEEEeccccCCCCceecCCCCCCCHHHHHHHHHHHHHH
Confidence 9999988 4 36899999999999887888754322 12223445677777764
No 13
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.90 E-value=1.3e-24 Score=178.58 Aligned_cols=110 Identities=12% Similarity=0.316 Sum_probs=93.8
Q ss_pred cCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcC--C
Q 018769 211 TGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLN--N 285 (350)
Q Consensus 211 ~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~--~ 285 (350)
.++|+||+|+++|+ +||||+.++||.|++|.+|||+||+||+|+.++.+|+++|+.+|+++++. ++++.+.++ .
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~-~~~~~~~~~~~~ 81 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVV-INKIAKEKGFDQ 81 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHH-HHHHHHHHTHHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHH-HHHHHHHhCCCC
Confidence 36899999999886 99999999999999999999999999999999999999999999999884 444444444 4
Q ss_pred CCeEEEEEcCCCCccCCCceeceEEEEEecCCCCCcccccc
Q 018769 286 PPFNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIG 326 (350)
Q Consensus 286 ~~yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~ 326 (350)
.+||+++|++|.+|+ +++|+|+||+||.. ++.|+-+
T Consensus 82 ~~~ni~~n~g~~agq----~v~HlH~Hiip~~~-~~~~~~~ 117 (119)
T 4egu_A 82 TGFRVINNCGSDGGQ----EVKHLHYHILAGKK-LPNYEAG 117 (119)
T ss_dssp HCEEEEEEETTTTTC----CSCSCCEEEEESSC-CCCGGGT
T ss_pred CCEEEEEeCCCCCCC----CcCEEEEEEeCCcc-cCccCcC
Confidence 599999999998764 68999999999975 3455443
No 14
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.90 E-value=4e-24 Score=180.17 Aligned_cols=125 Identities=11% Similarity=0.178 Sum_probs=103.7
Q ss_pred CCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCe
Q 018769 212 GKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPF 288 (350)
Q Consensus 212 g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~y 288 (350)
.+|+||+|+++|+ +||||+.++||.|++|.+|||++|+||+|+.++.+|+++++.+|+.+++++.+++++.++..++
T Consensus 5 ~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 84 (138)
T 3p0t_A 5 MASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERS 84 (138)
T ss_dssp HHHHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred CCChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3599999999986 9999999999999999999999999999999999999999999999999999999999998889
Q ss_pred EEEEEcCCCCccCCCceeceEEEEEecCCCC-CccccccccCCCCCCcHHHHHHHHHhc
Q 018769 289 NFMIQTAPLQAIDTQLAYIHWFLQIVPQLAG-VGGFEIGTGCYINPVFSEDAAKVMQEV 346 (350)
Q Consensus 289 N~~~~~~p~~~~~~~~~~~H~HihiiPR~~~-~aG~El~~g~~in~~~PE~aA~~Lr~~ 346 (350)
|+.. . ++.++|+|+||+||+.. -.+|.+. .....+...++++++||++
T Consensus 85 n~~~-----~----gq~v~HlH~HiiPr~~~d~~~~~~~-~~~~~~~~l~~~~~~l~~~ 133 (138)
T 3p0t_A 85 GLII-----A----GLEVPHLHVHVFPTRSLSDFGFANV-DRNPSPESLDEAQAKIKAA 133 (138)
T ss_dssp EEEE-----C----CSSCSSCCEEEEEESCGGGSSSTTC-CSSCCHHHHHHHHHHHHHH
T ss_pred cEEE-----C----CcccCEEEEEEeccccCCCCcccCC-CCCCCHHHHHHHHHHHHHH
Confidence 9864 2 35689999999999874 1233221 1223334556777888764
No 15
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.90 E-value=2.8e-24 Score=176.65 Aligned_cols=103 Identities=10% Similarity=0.207 Sum_probs=90.1
Q ss_pred CCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHH-HcCCCC
Q 018769 212 GKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISV-QLNNPP 287 (350)
Q Consensus 212 g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~-~~~~~~ 287 (350)
.+|+||+|+++|+ +||||+.++||.|++|.+|||+||+||+|++++.+|+++|+.+|+++++.+.+.+++ .++.++
T Consensus 3 ~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~g 82 (119)
T 3n1s_A 3 EETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDG 82 (119)
T ss_dssp CCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 5799999999886 999999999999999999999999999999999999999888888877655444443 356679
Q ss_pred eEEEEEcCCCCccCCCceeceEEEEEecCCC
Q 018769 288 FNFMIQTAPLQAIDTQLAYIHWFLQIVPQLA 318 (350)
Q Consensus 288 yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~ 318 (350)
||+++|.++.+| |+++|+|+||+||..
T Consensus 83 ~ni~~n~g~~ag----q~V~HlH~Hiipr~~ 109 (119)
T 3n1s_A 83 YRLIMNTNRHGG----QEVYHIHMHLLGGRP 109 (119)
T ss_dssp EEEEEEEHHHHT----CCSSSCCEEEEESSC
T ss_pred eEEEEeCCCCcC----CCcCEEEEEEeCCcc
Confidence 999999988766 469999999999965
No 16
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.90 E-value=2.8e-24 Score=182.98 Aligned_cols=104 Identities=16% Similarity=0.334 Sum_probs=92.2
Q ss_pred hcCCCccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCC-
Q 018769 210 QTGKCCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNN- 285 (350)
Q Consensus 210 ~~g~c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~- 285 (350)
..++|+||+|+++|+ +|+||+.++||+|++|.+|||+||+||+|+.++.+|+++|+.+|+++++ +++++.+.++.
T Consensus 33 ~m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~-~~~~v~~~~~~~ 111 (147)
T 1xqu_A 33 TLENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHK-AANKVAEDLGIA 111 (147)
T ss_dssp -CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHH-HHHHHHHHTTCT
T ss_pred ccCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHH-HHHHHHHHhCCC
Confidence 346899999999876 9999999999999999999999999999999999999999999999998 66666666663
Q ss_pred -CCeEEEEEcCCCCccCCCceeceEEEEEecCCC
Q 018769 286 -PPFNFMIQTAPLQAIDTQLAYIHWFLQIVPQLA 318 (350)
Q Consensus 286 -~~yN~~~~~~p~~~~~~~~~~~H~HihiiPR~~ 318 (350)
.+||+++|++|.+++ +++|+|+||+||..
T Consensus 112 ~~gyni~~n~g~~aGq----~v~HlHlHiiP~~~ 141 (147)
T 1xqu_A 112 EKGYRLITNCGVAAGQ----TVFHLHYHLLGGVD 141 (147)
T ss_dssp TTCEEEECCCSTTTTC----CSCSCCEEEEESSC
T ss_pred CCCEEEEEecCcccCC----CccEEEEEEeCCCc
Confidence 499999999998764 68999999999975
No 17
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.90 E-value=4.9e-24 Score=174.61 Aligned_cols=100 Identities=14% Similarity=0.256 Sum_probs=89.2
Q ss_pred CccccccCCCe---EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEE
Q 018769 214 CCLCEVQPKDL---QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNF 290 (350)
Q Consensus 214 c~fc~ii~~E~---iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~ 290 (350)
|+||+|+++|+ +||||+.++||.|++|.+|||++|+||+|+.++.+|+++|+.+|+++++.+.+.+++.+. ++||+
T Consensus 9 CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~-~g~ni 87 (117)
T 3oj7_A 9 CIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECP-EGYRV 87 (117)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCT-TCEEE
T ss_pred CcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEE
Confidence 99999999886 999999999999999999999999999999999999999999999998855555554454 49999
Q ss_pred EEEcCCCCccCCCceeceEEEEEecCCC
Q 018769 291 MIQTAPLQAIDTQLAYIHWFLQIVPQLA 318 (350)
Q Consensus 291 ~~~~~p~~~~~~~~~~~H~HihiiPR~~ 318 (350)
++|++|.+|+ +++|+|+||+||..
T Consensus 88 ~~n~g~~agq----~v~H~H~Hiipr~~ 111 (117)
T 3oj7_A 88 VNNIGEDAGQ----TVKHIHFHILGGKK 111 (117)
T ss_dssp ECCCSTTTTC----CSSSCCEEEEESSC
T ss_pred EEcCCCCCCe----eeeEEEEEEeCCCC
Confidence 9999998764 68999999999975
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.89 E-value=6e-23 Score=176.11 Aligned_cols=126 Identities=10% Similarity=0.101 Sum_probs=106.8
Q ss_pred cCCCccccccCCCeEEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEE
Q 018769 211 TGKCCLCEVQPKDLQIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNF 290 (350)
Q Consensus 211 ~g~c~fc~ii~~E~iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~ 290 (350)
.+.|+||+++. ..+|+|++.++||.|++|.+|+|+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+||+
T Consensus 9 ~~~C~FC~~~~-~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g~ni 87 (154)
T 2oik_A 9 HKNCELCTTAG-GEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDKINL 87 (154)
T ss_dssp CTTCHHHHSCC-SEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCCCccCCCCC-CeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEh
Confidence 35799999764 35999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCccCCCceeceEEEEEecCCCCCccc---cccccC--CCCCCcHHHHHHHHHhc
Q 018769 291 MIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGF---EIGTGC--YINPVFSEDAAKVMQEV 346 (350)
Q Consensus 291 ~~~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~---El~~g~--~in~~~PE~aA~~Lr~~ 346 (350)
+. . ++.++|+|+||+||+..-+|+ .++.+. ..++..+++++++||++
T Consensus 88 ~~-----~----gq~v~HlHiHiiPr~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~ 139 (154)
T 2oik_A 88 AS-----L----GNMTPHVHWHVIPRFKRDRHFPNSVWGETKRESLPQALDQGSTTALKKA 139 (154)
T ss_dssp EE-----C----CSSSCSCEEEEEEECTTSSSTTSCTTSCCCSCCCCCCCCHHHHHHHHHH
T ss_pred HH-----h----CCCCCEEEEEEeCCCCCCCCCCccccCCCccccchhHHHHHHHHHHHHH
Confidence 72 2 246899999999999865554 344322 34556789999999864
No 19
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.86 E-value=1.6e-21 Score=165.83 Aligned_cols=93 Identities=17% Similarity=0.265 Sum_probs=87.5
Q ss_pred CeEEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCC
Q 018769 223 DLQIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDT 302 (350)
Q Consensus 223 E~iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~ 302 (350)
..+|+|++.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+||+++|++|.+++
T Consensus 13 ~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~agq-- 90 (147)
T 1fit_A 13 SVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQ-- 90 (147)
T ss_dssp GGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTC--
T ss_pred cEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccCC--
Confidence 349999999999999999999999999999999999999999999999999999999999999999999999997764
Q ss_pred CceeceEEEEEecCCCC
Q 018769 303 QLAYIHWFLQIVPQLAG 319 (350)
Q Consensus 303 ~~~~~H~HihiiPR~~~ 319 (350)
.++|+|+||+||+..
T Consensus 91 --~v~HlH~HiiPr~~~ 105 (147)
T 1fit_A 91 --TVKHVHVHVLPRKAG 105 (147)
T ss_dssp --CSSSCCEEEEEECTT
T ss_pred --CccEEEEEEECCcCC
Confidence 689999999999864
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.82 E-value=2.9e-20 Score=184.72 Aligned_cols=105 Identities=18% Similarity=0.201 Sum_probs=95.2
Q ss_pred cCCCccccc-cCCCeEEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Q 018769 211 TGKCCLCEV-QPKDLQIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFN 289 (350)
Q Consensus 211 ~g~c~fc~i-i~~E~iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN 289 (350)
.++|+||+- +..+.+||||++++||+|++|.+|+|+||+||+|+.++.+|+++++.+|+.+++++.+++++.++..+||
T Consensus 296 ~~~c~fc~~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~~n 375 (440)
T 1ems_A 296 TGGLKFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTT 375 (440)
T ss_dssp SSCCEETTEECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred cCceeeeccccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCCeE
Confidence 457999982 2223389999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCccCCCceeceEEEEEecCCCC
Q 018769 290 FMIQTAPLQAIDTQLAYIHWFLQIVPQLAG 319 (350)
Q Consensus 290 ~~~~~~p~~~~~~~~~~~H~HihiiPR~~~ 319 (350)
+++|++|..++ .++|+|+||+||+..
T Consensus 376 ~~~~~g~~~gq----~v~HlH~Hiipr~~~ 401 (440)
T 1ems_A 376 ICVQDGKDAGQ----TVPHVHIHILPRRAG 401 (440)
T ss_dssp EECCCSGGGTC----CSSSCCEEEEEECSS
T ss_pred EEEecCCCCCC----CccEEEEEEeCCCCC
Confidence 99999998764 689999999999874
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.63 E-value=1.7e-15 Score=127.11 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=90.8
Q ss_pred EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCCCc
Q 018769 225 QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDTQL 304 (350)
Q Consensus 225 iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~~~ 304 (350)
+|++++.+.++....|.+|||++|+||+|+.++.||++++..+|...++++.+++.+.++..++|++ .. +|
T Consensus 15 ~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~-----~a----Gq 85 (137)
T 3ohe_A 15 KLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVA-----AL----GN 85 (137)
T ss_dssp EEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE-----EC----CS
T ss_pred EEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-----ec----cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999998 22 35
Q ss_pred eeceEEEEEecCCCCCccc---cccccC--CCCCCcHHHHHHHHHhc
Q 018769 305 AYIHWFLQIVPQLAGVGGF---EIGTGC--YINPVFSEDAAKVMQEV 346 (350)
Q Consensus 305 ~~~H~HihiiPR~~~~aG~---El~~g~--~in~~~PE~aA~~Lr~~ 346 (350)
.++|+|+||+||+..-..+ -++.+. ...+...++.+++||++
T Consensus 86 ~V~HlH~HviPR~~~D~~~p~~vw~~~~~~~~~~eel~~~~~~ir~~ 132 (137)
T 3ohe_A 86 MVPQLHLHHIVRYQGDPAWPGPVWGKQPPVPYTEEQQASVKAKLQPL 132 (137)
T ss_dssp SCCSCCEEEEEECTTSTTTTSCCTTSSCCCCCCHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEeCCCCCCCCCCcccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 7999999999999743222 222111 11223345666777653
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.60 E-value=4.5e-15 Score=126.18 Aligned_cols=113 Identities=5% Similarity=0.019 Sum_probs=91.7
Q ss_pred EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCCCc
Q 018769 225 QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDTQL 304 (350)
Q Consensus 225 iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~~~ 304 (350)
+|++++.+.+|+...|.+|||++|+||+|+.++.||++++..+|...++++.+++.+.++..++|++. . +|
T Consensus 15 ~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~-----a----Gq 85 (149)
T 3i24_A 15 VLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGA-----L----GN 85 (149)
T ss_dssp EEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEE-----C----CS
T ss_pred EEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhh-----h----hC
Confidence 89999999999999999999999999999999999999999999999999999999999999999983 2 35
Q ss_pred eeceEEEEEecCCCCCcccc---ccccC--CCCCCcHHHHHHHHHhc
Q 018769 305 AYIHWFLQIVPQLAGVGGFE---IGTGC--YINPVFSEDAAKVMQEV 346 (350)
Q Consensus 305 ~~~H~HihiiPR~~~~aG~E---l~~g~--~in~~~PE~aA~~Lr~~ 346 (350)
.++|+|+||+||+..-.++- ++.+. ...+...+++|++||++
T Consensus 86 ~V~HlH~HvIPR~~~D~~~~~~vw~~~~~~~~~~eel~~~a~kIr~~ 132 (149)
T 3i24_A 86 LVPQLHIHHIARFTTDVAWPGPVWGNTTGVIRAQSSQTQLVDLLRDK 132 (149)
T ss_dssp SCCSCCEEEEEECTTSTTTTSCSTTCSCCCBCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCccCCCCCCcceecCCCCCCCCHHHHHHHHHHHHHH
Confidence 79999999999997433221 22111 11223345677788764
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.52 E-value=7.1e-14 Score=116.94 Aligned_cols=85 Identities=11% Similarity=0.082 Sum_probs=77.0
Q ss_pred EEEecCcEEEEecCCCCCCceEEEEeC-CCCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCCC
Q 018769 225 QIDVTTHFISIVPFAATFPFEIWIIPR-NHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDTQ 303 (350)
Q Consensus 225 iV~e~~~~iaf~p~~p~~p~e~~IiPk-rH~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~~ 303 (350)
+|++++.+.++....|.+|+ ++|||| +|+.++.||++++..+|...++++.+++.+.++..++|++ .. +
T Consensus 17 ~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~-----~a----G 86 (135)
T 3nrd_A 17 PIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG-----AL----G 86 (135)
T ss_dssp EEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE-----EC----C
T ss_pred EEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-----ec----c
Confidence 89999999999999999994 678898 7999999999999999999999999999999999999997 12 3
Q ss_pred ceeceEEEEEecCCCC
Q 018769 304 LAYIHWFLQIVPQLAG 319 (350)
Q Consensus 304 ~~~~H~HihiiPR~~~ 319 (350)
|.++|+|+||+||+..
T Consensus 87 q~V~HlH~HviPR~~~ 102 (135)
T 3nrd_A 87 NIVRQLHVHVIARREG 102 (135)
T ss_dssp SSCCSCCEEEEEECTT
T ss_pred CCCCEEEEEEecCCCC
Confidence 5799999999999974
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.47 E-value=3.2e-13 Score=114.69 Aligned_cols=112 Identities=12% Similarity=0.052 Sum_probs=85.4
Q ss_pred EEEecCcEEEEecCCCCCCceEEEEeCC-CCCCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCCC
Q 018769 225 QIDVTTHFISIVPFAATFPFEIWIIPRN-HSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDTQ 303 (350)
Q Consensus 225 iV~e~~~~iaf~p~~p~~p~e~~IiPkr-H~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~~ 303 (350)
++++...+.++..-.+ .+.|++||||+ |+.++.||+++++.+|...++++.+.+.+.++..+||++ .. +
T Consensus 20 ~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~-----~a----G 89 (149)
T 3i4s_A 20 DIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIA-----AL----G 89 (149)
T ss_dssp EEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE-----EC----C
T ss_pred EEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-----ec----C
Confidence 7888988888886444 55599999999 899999999999999999999999999999998899986 22 3
Q ss_pred ceeceEEEEEecCCCCCccc---cccccC--CCCCCcHHHHHHHHHhc
Q 018769 304 LAYIHWFLQIVPQLAGVGGF---EIGTGC--YINPVFSEDAAKVMQEV 346 (350)
Q Consensus 304 ~~~~H~HihiiPR~~~~aG~---El~~g~--~in~~~PE~aA~~Lr~~ 346 (350)
|.++|+|+||+||+..-..+ -++.+. ...+...++.|++||++
T Consensus 90 q~V~HlH~HvIPR~~~D~~~p~pvw~~~~~~~~~~eel~~~a~~Ir~~ 137 (149)
T 3i4s_A 90 NLVPQLHVHIIARRTGDAAWPRPVWGVMQPLAHDATEVQNFISALRRK 137 (149)
T ss_dssp SSCCSCCEEEEEECTTSTTTTSCCTTTSCCCCCCHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEEECCcCCCCCCCccccCCCcCCCCCHHHHHHHHHHHHHH
Confidence 57999999999999743322 222111 11223345667777754
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.90 E-value=1.6e-09 Score=95.82 Aligned_cols=82 Identities=10% Similarity=0.046 Sum_probs=57.2
Q ss_pred EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccCCCHH--HHHHHHHHHHHHHH-H-HHHH----------c-C----C
Q 018769 225 QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHELDNE--KAVDLGGLLKLTLR-K-ISVQ----------L-N----N 285 (350)
Q Consensus 225 iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~l~~~--e~~~La~~l~~v~~-~-l~~~----------~-~----~ 285 (350)
+||||+.++||.+.+|..|+|++||||+|+.++.+..+. +...|..-+..++. . +.+. + + .
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 899999999999999999999999999999998765431 11122222222222 1 1111 1 1 1
Q ss_pred CCeEEEEEcCCCCccCCCceeceEEEEEe
Q 018769 286 PPFNFMIQTAPLQAIDTQLAYIHWFLQIV 314 (350)
Q Consensus 286 ~~yN~~~~~~p~~~~~~~~~~~H~Hihii 314 (350)
..+|+++|..| +..|+|+||+
T Consensus 103 ~~i~~GfHa~P--------Sm~HLHLHVI 123 (204)
T 3sp4_A 103 NYIKVGFHAGP--------SMNNLHLHIM 123 (204)
T ss_dssp TTEEEEEESSC--------SSSSCCEEEE
T ss_pred eeEeccCCCCC--------cccceeEEEe
Confidence 26899999876 4789999998
No 26
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=98.25 E-value=6.7e-07 Score=72.26 Aligned_cols=101 Identities=19% Similarity=0.323 Sum_probs=65.9
Q ss_pred CCCCCCCCCCCCCCce-eccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCCC
Q 018769 52 SCPFCIGNEHECAPEI-FRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESPV 130 (350)
Q Consensus 52 ~CPFC~g~e~~t~~ei-~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp~ 130 (350)
.|+||.--..+.+..+ ++ + . .+.+|.|.||... .| |+|...+
T Consensus 8 ~CiFC~i~~~e~~~~iv~e--~-~----~~~af~d~~P~~p-----------------------------gH-~LViPk~ 50 (117)
T 3oj7_A 8 SCIFCKIAQKQIPSTIVYE--D-D----EIFAFKDINPIAP-----------------------------IH-ILVIPKQ 50 (117)
T ss_dssp -CHHHHHHTTSSCCCEEEE--C-S----SEEEEECSSCSSS-----------------------------EE-EEEEESS
T ss_pred CCcccccccCCCCCCEEEE--C-C----cEEEEECCCCCCC-----------------------------ce-EEEEech
Confidence 4999975433333333 32 2 2 5788999999732 24 5566789
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHhc--CCCccEEEEecccCccCCCCCcccccceecCCC
Q 018769 131 HSVQLQDLEPREVGEVLLACKKRIEQIKE--YDLIKYVQVFKNHGASAGASMSHSHSQLLALPV 192 (350)
Q Consensus 131 H~~~l~~~~~~~~~~~l~~~~~r~~~l~~--~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~~~ 192 (350)
|..++.+|+.++...+..+.+ ....+.+ -+. -..+..|.|+.+|.|+.|.|.+|++-..
T Consensus 51 H~~~l~dL~~~e~~~l~~l~~-~~~~~~~~~~~~--g~ni~~n~g~~agq~v~H~H~Hiipr~~ 111 (117)
T 3oj7_A 51 HIASLNEITEENEAFIGKVLY-KVSLIGKKECPE--GYRVVNNIGEDAGQTVKHIHFHILGGKK 111 (117)
T ss_dssp CCCSGGGCCTTTHHHHHHHHH-HHHHHHHHHCTT--CEEEECCCSTTTTCCSSSCCEEEEESSC
T ss_pred HhCCHHHCCHHHHHHHHHHHH-HHHHHHHhcCCC--CeEEEEcCCCCCCeeeeEEEEEEeCCCC
Confidence 999999999886544444333 2222211 111 3467889999999999999999997543
No 27
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=98.12 E-value=7.4e-06 Score=76.21 Aligned_cols=107 Identities=11% Similarity=0.125 Sum_probs=79.3
Q ss_pred EEEecCc----EEEEecCC----CCCCceEEEEeCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHcC--CCCeEEEEE
Q 018769 225 QIDVTTH----FISIVPFA----ATFPFEIWIIPRNH-SSHFHELDNEKAVDLGGLLKLTLRKISVQLN--NPPFNFMIQ 293 (350)
Q Consensus 225 iV~e~~~----~iaf~p~~----p~~p~e~~IiPkrH-~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~--~~~yN~~~~ 293 (350)
+|++++. |++|.++. +....|.++||++| +.++.+|+.+.+.-|-.+...+.+.+.+.+| ...+.+++|
T Consensus 153 ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~rlgfH 232 (301)
T 3bl9_A 153 IVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLH 232 (301)
T ss_dssp CCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred EEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEec
Confidence 8999877 99999986 78899999999877 9999999999888887777777777766655 348999999
Q ss_pred cCCCCccCCCceeceEEEEEecCCCCCccccccccCCCCCCcHHHHHHHHH
Q 018769 294 TAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVFSEDAAKVMQ 344 (350)
Q Consensus 294 ~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~in~~~PE~aA~~Lr 344 (350)
..| +++|+|+||+-.-....|...+- ..-.++.-+.|+
T Consensus 233 y~P--------S~yHLHlHvis~~~~s~~~~~~k-----A~lLddVI~~Le 270 (301)
T 3bl9_A 233 YLP--------SYYHLHVHFTALGFEAPGSGVER-----AHLLAEVIENLE 270 (301)
T ss_dssp SSC--------SSSSCEEEEEETTSCCTTCBTTT-----EEEHHHHHHHHH
T ss_pred CCC--------CcceEEEEEEecCCCCCccccce-----eeeHHHHHHHHH
Confidence 887 36899999884322113433332 122355656664
No 28
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=98.10 E-value=1.9e-06 Score=69.72 Aligned_cols=105 Identities=20% Similarity=0.377 Sum_probs=67.2
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.--..+.+.. +++ + . .+.+|-|.||... .| |+|...
T Consensus 4 ~~C~FC~i~~~e~~~~iv~e--~-e----~~~af~d~~P~~p-----------------------------gH-~LViPk 46 (119)
T 4egu_A 4 MDCIFCKIANGEIPSTKVYE--D-D----RVLAFNDLNPVAP-----------------------------YH-ILVVPK 46 (119)
T ss_dssp TTCHHHHHHTTSSCCCEEEE--C-S----SEEEEECSSCSSS-----------------------------EE-EEEEES
T ss_pred CCccCeecccCCCCCCEEEE--C-C----CEEEEECCCCCCC-----------------------------ce-EEEEec
Confidence 4699997433322333 332 2 2 5788899999631 24 555678
Q ss_pred CCCCCcCCCCHHHHH---HHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceecCCCCC
Q 018769 130 VHSVQLQDLEPREVG---EVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLALPVIP 194 (350)
Q Consensus 130 ~H~~~l~~~~~~~~~---~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~~~~p 194 (350)
+|..++.+|+.++.. .++.+.+.-.+.+.-. -.-..+..|.|+.+|.|+.|.|.+|++-....
T Consensus 47 ~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~--~~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~ 112 (119)
T 4egu_A 47 KHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFD--QTGFRVINNCGSDGGQEVKHLHYHILAGKKLP 112 (119)
T ss_dssp SCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHH--HHCEEEEEEETTTTTCCSCSCCEEEEESSCCC
T ss_pred hhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCC--CCCEEEEEeCCCCCCCCcCEEEEEEeCCcccC
Confidence 999999999988544 4444332222222100 11235678999999999999999999876554
No 29
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=98.09 E-value=9.4e-06 Score=76.61 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=79.6
Q ss_pred eEEEecCc----EEEEecCC----CCCCceEEEEeCCC-CCCccCCCHHHHHHHHHHHHHHHHHHHHHcC--CCCeEEEE
Q 018769 224 LQIDVTTH----FISIVPFA----ATFPFEIWIIPRNH-SSHFHELDNEKAVDLGGLLKLTLRKISVQLN--NPPFNFMI 292 (350)
Q Consensus 224 ~iV~e~~~----~iaf~p~~----p~~p~e~~IiPkrH-~~~~~~l~~~e~~~La~~l~~v~~~l~~~~~--~~~yN~~~ 292 (350)
.+||+++. |++|.++. +....|.++||++| +.++.+|+.+.+.-|-.+...+.+.+.+.+| ...+.++|
T Consensus 199 ~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlgf 278 (350)
T 1vlr_A 199 RIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYL 278 (350)
T ss_dssp CCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred cEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEe
Confidence 38999877 99999986 78899999999877 9999999999888887777777777766655 34899999
Q ss_pred EcCCCCccCCCceeceEEEEEecCCCCCccccccccCCCCCCcHHHHHHHHH
Q 018769 293 QTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVFSEDAAKVMQ 344 (350)
Q Consensus 293 ~~~p~~~~~~~~~~~H~HihiiPR~~~~aG~El~~g~~in~~~PE~aA~~Lr 344 (350)
|..| +++|+|+||+-.-....|...+- ..-.+..-+.|+
T Consensus 279 Hy~P--------S~yHLHlHvis~~~~s~~l~~~K-----A~lLddVI~nLe 317 (350)
T 1vlr_A 279 HYLP--------SYYHLHVHFTALGFEAPGSGVER-----AHLLAQVIENLE 317 (350)
T ss_dssp ESSC--------SSSSCEEEEEETTSCCTTCBTTT-----EEEHHHHHHHHH
T ss_pred cCCC--------CcceEEEEEEeccCCCCccccCe-----eeeHHHHHHHHH
Confidence 9887 36899999984322113433332 122355666664
No 30
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=98.09 E-value=7e-06 Score=69.16 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=72.7
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.-...+.+.. +++ + . .+.+|-|.+|... .|-+| -..
T Consensus 5 ~~CiFC~i~~~e~~~~iv~e--~-~----~~~af~d~~p~~p-----------------------------gh~lV-iPk 47 (149)
T 3o0m_A 5 MSCVFCAIVSGDAPAIRIYE--D-E----NFLGILDIRPFTR-----------------------------GHTLV-IPK 47 (149)
T ss_dssp TTCHHHHHHTTSSCCCEEEE--C-S----SEEEEECSSCSST-----------------------------TCEEE-EES
T ss_pred CCCccCccccCCCCCCEEEE--C-C----CEEEEEcCCCCCC-----------------------------CeEEE-Eec
Confidence 4699997544333332 232 2 3 5778888888632 35444 466
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHHhcC-CCccEEEEecccCccCCCCCcccccceec
Q 018769 130 VHSVQLQDLEPREVGEVLLACKKRIEQIKEY-DLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 130 ~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~-~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
+|..++.+++.+++..++.+.+.-.+.|++. -...-+.+..|.|+.+|.++.|-|.+|+.
T Consensus 48 ~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~~ni~~n~g~~aGq~v~HlHiHiiP 108 (149)
T 3o0m_A 48 THTVDLTDTPPETVAGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVP 108 (149)
T ss_dssp SCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCSEEEEECCCSGGGTCCSSSCCEEEEE
T ss_pred hhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCCCccceEEEEEEC
Confidence 8999999999999999999888777666543 12233466779999999999999999984
No 31
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=98.04 E-value=5.7e-06 Score=70.73 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=72.3
Q ss_pred CCCCCCCCCCCCCCCCce-eccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeC
Q 018769 50 SSSCPFCIGNEHECAPEI-FRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIES 128 (350)
Q Consensus 50 ~~~CPFC~g~e~~t~~ei-~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIies 128 (350)
++.|+||.-...+.+..+ ++ + . .+.+|.|.||... .| ++|-.
T Consensus 27 ~~~CiFC~i~~~e~p~~iV~e--~-e----~~~af~d~~P~~p-----------------------------gH-~LViP 69 (161)
T 3lb5_A 27 DNNNIFAKLIRNEIPSVRVYE--D-D----DVIAFMDIMPQAP-----------------------------GH-TLVIP 69 (161)
T ss_dssp CTTSHHHHHHTTSSCCCEEEE--C-S----SEEEEECSSCSST-----------------------------TC-EEEEE
T ss_pred CCCCcccccccCCCCccEEEE--C-C----CEEEEECCCcCCC-----------------------------cE-EEEEE
Confidence 457999975444333332 22 2 2 5788889998732 24 44555
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 129 PVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 129 p~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
.+|..++.+++.+++..++.+.+.-.+.|++.=+..-+.+..|.|+.+|.++.|-|.+|+.
T Consensus 70 k~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~HlHiHiiP 130 (161)
T 3lb5_A 70 KKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIP 130 (161)
T ss_dssp SSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEESGGGTCCSCSCCEEEEE
T ss_pred eeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCCCEEEEEEEc
Confidence 7899999999999999999888776666542111123356678999999999999999973
No 32
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=97.93 E-value=4.3e-06 Score=68.43 Aligned_cols=103 Identities=18% Similarity=0.236 Sum_probs=67.6
Q ss_pred CCCCCCCCCCCCCCCCceeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 50 SSSCPFCIGNEHECAPEIFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 50 ~~~CPFC~g~e~~t~~ei~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
...|.||.--..+.+..+.. ++. .+.+|.|.||... .| ++|-..
T Consensus 14 ~~~CiFC~i~~~e~~~~iv~--e~e----~~~af~d~~P~~p-----------------------------gH-~LViPk 57 (126)
T 3o1c_A 14 GGDTIFGKIIRKEIPAKIIF--EDD----QALAFHDISPQAP-----------------------------TH-FLVIPK 57 (126)
T ss_dssp TCSSHHHHHHHTSSCCCEEE--ECS----SEEEEECSSCSSS-----------------------------EE-EEEEES
T ss_pred CCCCCcchhhcCCCcCCEEE--ECC----CEEEEECCCCCCC-----------------------------ce-EEEEec
Confidence 45799996433222333322 113 5888999999732 35 556677
Q ss_pred CCCCCcCCCCHHHH---HHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceecCC
Q 018769 130 VHSVQLQDLEPREV---GEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLALP 191 (350)
Q Consensus 130 ~H~~~l~~~~~~~~---~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~~ 191 (350)
+|..++.+++.++. ..++.+.++-.+.+....++ .+..|.|+.||.|+.|-|..|+.-.
T Consensus 58 ~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~~g~---ni~~n~g~~agq~v~HlH~Hiipr~ 119 (126)
T 3o1c_A 58 KHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGY---RMVVNEGSDGGQSVYHVHLHVLGGR 119 (126)
T ss_dssp SCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTCE---EEECCCHHHHTCCSSSCCEEEEESS
T ss_pred hHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCCCCe---EEEEecCCccCCccCEeEEEEeCCc
Confidence 99999999998874 44444444444444322233 4567999999999999999998643
No 33
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=97.91 E-value=1.4e-05 Score=67.12 Aligned_cols=67 Identities=22% Similarity=0.270 Sum_probs=51.8
Q ss_pred eEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 122 HDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 122 heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|-+|| ..+|..++.+|+.+++..++.+.+.-.+.|.+.-+..-+.+..|.|+.+|.|+.|-|.+|+.
T Consensus 35 h~lVi-Pk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v~HlHiHviP 101 (149)
T 2eo4_A 35 HTLVI-PKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRLLTNIGRSAGQVIFHLHVHIIP 101 (149)
T ss_dssp CEEEE-ESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSCSCCEEEEE
T ss_pred eEEEE-echhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCCCCCcCEEEEEEEC
Confidence 54444 66899999999999999998887776666643222234566778999999999999999984
No 34
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=97.89 E-value=9.9e-06 Score=68.05 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=71.1
Q ss_pred CCCCCCCCCCCCCCCceeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCCC
Q 018769 51 SSCPFCIGNEHECAPEIFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESPV 130 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~ei~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp~ 130 (350)
..|+||.-...+.+..+.. ++. .+.+|-+.+|... .|-+| -..+
T Consensus 9 ~~CifC~i~~~e~~~~iV~--e~~----~~~a~~d~~p~~p-----------------------------gh~lV-iPk~ 52 (147)
T 3imi_A 9 DNCIFCKIIDGQILCSKVY--EDE----HVLAFLDISQVTK-----------------------------GHTLV-IPKV 52 (147)
T ss_dssp GGCHHHHHHTTSSCCCEEE--ECS----SEEEEECTTCSST-----------------------------TCEEE-EESS
T ss_pred CCCcCcccccCCCcCCEEE--ECC----CEEEEEcCCCCCC-----------------------------cEEEE-EEee
Confidence 4699997544433333221 112 5678888888632 35444 4569
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 131 HSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 131 H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|..++.+++.+++..++.+.+.-.+.|.+.-+..-+.+..|.|+.+|.++.|-|.+|+.
T Consensus 53 H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~aGq~v~HlHiHiiP 111 (147)
T 3imi_A 53 HKQDIFALTPEIASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIP 111 (147)
T ss_dssp CCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCCSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred ccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCcccCCCcCEEEEEEeC
Confidence 99999999999999998887776665542111223456678999999999999999984
No 35
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=97.78 E-value=1.1e-05 Score=67.47 Aligned_cols=102 Identities=17% Similarity=0.262 Sum_probs=68.3
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.-...+.+.. +++ + . .+++|-+++|... .|-+|| ..
T Consensus 5 ~~C~fC~i~~~e~~~~iv~e--~-~----~~~a~~~~~p~~p-----------------------------gh~LVi-Pk 47 (145)
T 1y23_A 5 ENCIFCKIIAGDIPSAKVYE--D-E----HVLAFLDISQVTK-----------------------------GHTLVI-PK 47 (145)
T ss_dssp CCCHHHHHHHTSSCCCEEEE--C-S----SEEEEECTTCSST-----------------------------TCEEEE-ES
T ss_pred CCCcCCccccCCCCCCEEEE--C-C----CEEEEECCCCCCC-----------------------------CeEEEE-Eh
Confidence 4699997322222222 332 2 3 5678888888632 354444 56
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 130 VHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 130 ~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
+|..++.+|+.+++..++.+.+.-.+.|.+.-+..-+.+..|.|+.+|.++.|-|.+|+.
T Consensus 48 ~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~g~~v~HlH~HiiP 107 (145)
T 1y23_A 48 THIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIP 107 (145)
T ss_dssp SCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred hhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCcCCCCCcCEEEEEEEc
Confidence 899999999999998888776665555532111123455678899999999999999984
No 36
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=97.75 E-value=2.1e-05 Score=67.98 Aligned_cols=102 Identities=15% Similarity=0.295 Sum_probs=71.0
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.-...+.+.. |++ + . .+.+|-|.+|... .|-+|| ..
T Consensus 36 ~~CiFC~Ii~~e~p~~iV~e--~-e----~~~afld~~P~~p-----------------------------gH~LVI-Pk 78 (173)
T 3l7x_A 36 NDCLFCKIVAGDIPSSKVYE--D-E----DVLAFLDISQATK-----------------------------GHTLVI-PK 78 (173)
T ss_dssp TTCHHHHHHHTSSCCCEEEE--C-S----SEEEEECTTCSST-----------------------------TCEEEE-ES
T ss_pred CCCcccccccCCCCceEEEE--C-C----CEEEEEcCCCCCC-----------------------------cEEEEE-ec
Confidence 4799998544333333 332 2 2 4678888888632 355554 56
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 130 VHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 130 ~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
+|..++.+++.+++..++.+.+.-.+.|.+.-+..-+.+..|.|+.+|.++.|-|..|+.
T Consensus 79 rHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~HlHiHiIP 138 (173)
T 3l7x_A 79 EHVRNALEMTQTQAANLFARIPKIARALQKATKADGLNIINNNEETAGQTVFHAHVHLVP 138 (173)
T ss_dssp SCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCSEEEEEECCSGGGTCCSCSCCEEEEE
T ss_pred cccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCcCEEEEEEEe
Confidence 899999999999999999888776665542111223445679999999999999999974
No 37
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=97.70 E-value=0.00015 Score=60.91 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=73.1
Q ss_pred CCCCCCCCCCCCCCCceeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCCC
Q 018769 51 SSCPFCIGNEHECAPEIFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESPV 130 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~ei~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp~ 130 (350)
..|.||.=-..+.|..+.. ++. .+.+|-+.+|... .| ++|-..+
T Consensus 11 ~~~iFc~Ii~geip~~iV~--ed~----~~~af~d~~P~~p-----------------------------gH-~LViPk~ 54 (149)
T 3ksv_A 11 ANCIFCKIIKGDIPCAKVA--ETS----KALAFMDINPLSR-----------------------------GH-MLVIPKE 54 (149)
T ss_dssp TTCHHHHHHHTSSCCCEEE--ECS----SEEEEECSSCSST-----------------------------TC-EEEEESS
T ss_pred ccCHHHHHHcCCCCccEEE--ECC----CEEEEECCCCCCC-----------------------------CE-EEEEeCh
Confidence 5799997444333433321 112 5778888888632 24 4445569
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCccccccee
Q 018769 131 HSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLL 188 (350)
Q Consensus 131 H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~ 188 (350)
|..++.+++.+++..++.+.+.-.+.++..-+-.-..+..|.|+.+|.++.|-|..|+
T Consensus 55 H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~v~HlHiHii 112 (149)
T 3ksv_A 55 HASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQYNVLQNNGSLAHQEVPHVHFHII 112 (149)
T ss_dssp CCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSTTTTCCSSSCCEEEE
T ss_pred hhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEecCcccCCCCCEEEEEEE
Confidence 9999999999999999998888777776432222345566999999999999999999
No 38
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=97.69 E-value=3.2e-05 Score=62.57 Aligned_cols=102 Identities=16% Similarity=0.226 Sum_probs=65.5
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
+.|+||.=-..+.+.. +++ + . .+.+|-|.||... .|-+| -..
T Consensus 3 ~~CiFC~I~~ge~~~~iv~e--d-e----~~~af~d~~P~~p-----------------------------gH~LV-iPk 45 (119)
T 3n1s_A 3 EETIFSKIIRREIPSDIVYQ--D-D----LVTAFRDISPQAP-----------------------------THILI-IPN 45 (119)
T ss_dssp CCCHHHHHHTTSSCCCEEEE--C-S----SEEEEECSSCSSS-----------------------------EEEEE-EES
T ss_pred CCChhhhhhcCCCcCCEEEE--C-C----CEEEEECCCCCCC-----------------------------CeEEE-Eeh
Confidence 4699996222222333 332 2 2 5788999999632 35444 467
Q ss_pred CCCCCcCCCCHHH---HHHHHHHHHHHHHHHh-cCCCccEEEEecccCccCCCCCcccccceecCCC
Q 018769 130 VHSVQLQDLEPRE---VGEVLLACKKRIEQIK-EYDLIKYVQVFKNHGASAGASMSHSHSQLLALPV 192 (350)
Q Consensus 130 ~H~~~l~~~~~~~---~~~~l~~~~~r~~~l~-~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~~~ 192 (350)
+|..++.+++.++ +..++...++-.+.+. ..+++ .+.-|.|+.+|.|+.|-|..|+.-.-
T Consensus 46 ~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~g~---ni~~n~g~~agq~V~HlH~Hiipr~~ 109 (119)
T 3n1s_A 46 ILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGY---RLIMNTNRHGGQEVYHIHMHLLGGRP 109 (119)
T ss_dssp SCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTTCE---EEEEEEHHHHTCCSSSCCEEEEESSC
T ss_pred hHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCCCe---EEEEeCCCCcCCCcCEEEEEEeCCcc
Confidence 9999999999995 4455554444444321 12343 34559999999999999999997543
No 39
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=97.67 E-value=3.1e-05 Score=69.34 Aligned_cols=102 Identities=26% Similarity=0.272 Sum_probs=68.9
Q ss_pred CCCCCCCCCCCC-CCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeC
Q 018769 51 SSCPFCIGNEHE-CAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIES 128 (350)
Q Consensus 51 ~~CPFC~g~e~~-t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIies 128 (350)
..|+||.-.... .+.. |++ + . .+.+|-|+||... .|-+|| .
T Consensus 69 ~~CiFC~i~~~e~~~~~iV~e--d-d----~~~afld~~P~~p-----------------------------GH~LVI-P 111 (218)
T 3ano_A 69 PAQPFTEIPQLSDEEGLVVAR--G-K----LVYAVLNLYPYNP-----------------------------GHLMVV-P 111 (218)
T ss_dssp -CCHHHHGGGSCHHHHTEEEE--C-S----SEEEEECSSCSST-----------------------------TCEEEE-E
T ss_pred CCCcCcccccCCCCCceEEEE--C-C----cEEEEEccCCCCC-----------------------------cEEEEE-e
Confidence 469999644321 1112 332 1 2 6788889999732 254444 5
Q ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCC-cccccceec
Q 018769 129 PVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASM-SHSHSQLLA 189 (350)
Q Consensus 129 p~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl-~HpH~Qi~a 189 (350)
.+|..+|.+|+.++...+..+.+.-.+.|++.-...-+.+..|.|+.+|.|+ .|-|.+|+.
T Consensus 112 krHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~g~ni~~n~G~~aGq~V~~HlHiHIIP 173 (218)
T 3ano_A 112 YRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPHGFNVGLNLGTSAGGSLAEHLHVHVVP 173 (218)
T ss_dssp SSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCSEEEEEEEESGGGTCTTTTSCCEEEEE
T ss_pred chhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCcccCEEEEEEEc
Confidence 6899999999999988888777665555543222223455568999999999 999999985
No 40
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=97.65 E-value=3.1e-05 Score=65.12 Aligned_cols=101 Identities=24% Similarity=0.405 Sum_probs=64.9
Q ss_pred CCCCCCCCCCCCCCCce-eccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPEI-FRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~ei-~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.-...+.+..+ ++ + . .+.+|-|+||... .| ++|-..
T Consensus 35 ~~CiFC~ii~~e~~~~iV~e--~-e----~~~af~d~~P~~p-----------------------------gH-~LViPk 77 (147)
T 1xqu_A 35 ENCVFCKIIKRELPSTIYYE--D-E----RVIAIKDINPAAP-----------------------------VH-VLIIPK 77 (147)
T ss_dssp TTCHHHHHHTTSSCBCEEEE--C-S----SEEEEECSSCSSS-----------------------------EE-EEEEES
T ss_pred CCCcccccccCCCCcEEEEE--C-C----cEEEEEecCCCCc-----------------------------cE-EEEEeC
Confidence 36999974332223332 32 2 3 5788889999732 24 455567
Q ss_pred CCCCCcCCCCHHH---HHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceecC
Q 018769 130 VHSVQLQDLEPRE---VGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLAL 190 (350)
Q Consensus 130 ~H~~~l~~~~~~~---~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~ 190 (350)
+|..++.+++.++ +..++.+.++-.+.+...+ .-..+..|.|+.+|.++.|-|.+|+.-
T Consensus 78 rHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~--~gyni~~n~g~~aGq~v~HlHlHiiP~ 139 (147)
T 1xqu_A 78 EHIANVKEINESNAQILIDIHKAANKVAEDLGIAE--KGYRLITNCGVAAGQTVFHLHYHLLGG 139 (147)
T ss_dssp SCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTT--TCEEEECCCSTTTTCCSCSCCEEEEES
T ss_pred cccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCC--CCEEEEEecCcccCCCccEEEEEEeCC
Confidence 9999999997766 5555554433333333111 123566799999999999999999853
No 41
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=97.59 E-value=0.00031 Score=69.10 Aligned_cols=100 Identities=21% Similarity=0.305 Sum_probs=72.1
Q ss_pred CCCCCCCCCCCCCCCC-ce-eccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEe
Q 018769 50 SSSCPFCIGNEHECAP-EI-FRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIE 127 (350)
Q Consensus 50 ~~~CPFC~g~e~~t~~-ei-~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIie 127 (350)
...|+||.+ | .+. .+ ++ + . .+.+|-+.+|... .|-+||
T Consensus 296 ~~~c~fc~~-e--~p~~~iv~e--~-~----~~~a~~~~~p~~p-----------------------------gh~lvi- 335 (440)
T 1ems_A 296 TGGLKFARF-N--IPADHIFYS--T-P----HSFVFVNLKPVTD-----------------------------GHVLVS- 335 (440)
T ss_dssp SSCCEETTE-E--CCGGGEEEE--C-S----SEEEEECSSCSST-----------------------------TCEEEE-
T ss_pred cCceeeecc-c--cCCceEEEE--C-C----CEEEEEcCCcCCC-----------------------------CeEEEE-
Confidence 467999983 2 122 22 33 2 2 5788888888632 355554
Q ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 128 SPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 128 sp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
..+|..++.+++.+++..++.+.+.-.+.|.+.-+..-+.+..|.|+.+|.++.|-|..|+.
T Consensus 336 Pk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~~n~~~~~g~~~gq~v~HlH~Hiip 397 (440)
T 1ems_A 336 PKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILP 397 (440)
T ss_dssp ESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCSGGGTCCSSSCCEEEEE
T ss_pred EccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCCCccEEEEEEeC
Confidence 56899999999999999999888777666653222234566779999999999999999985
No 42
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=97.45 E-value=5e-05 Score=62.76 Aligned_cols=94 Identities=18% Similarity=0.350 Sum_probs=66.8
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.-.. .+.. +++ + . .+.+|-|.+|... .|- +|-..
T Consensus 6 ~~C~fC~i~~--~~~~iv~e--~-~----~~~af~d~~p~~p-----------------------------gh~-lViPk 46 (135)
T 3r6f_A 6 EGCIFCTLYR--KGANIIYE--T-D----RLFALIDRYPLSK-----------------------------GHF-LVIPK 46 (135)
T ss_dssp CCCHHHHHHH--HCCSCCEE--C-S----SEEEEECSSCSST-----------------------------TCE-EEEES
T ss_pred CCCcCccccc--CCceEEEE--C-C----CEEEEECCCCCCC-----------------------------CeE-EEEEh
Confidence 4699997543 1222 332 2 3 5788999999732 254 44566
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 130 VHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 130 ~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
+|..++.+|+.+++..++.+.+.-.+.+..+ + ..+..|.|+ |.+..|-|.+|+-
T Consensus 47 ~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~-~---~ni~~n~g~--gq~v~HlH~HiiP 100 (135)
T 3r6f_A 47 AHHPYLHNYKPEELSGVLDTIRHLVQKFGFE-R---YNILQNNGN--HQEVFHVHFHVIP 100 (135)
T ss_dssp SCCSSGGGSCGGGGTTHHHHHHHHHHHHTCC-S---EEEECCSSS--SCSSSSCCEEEEE
T ss_pred hHhCCHhHCCHHHHHHHHHHHHHHHHHhCCC-C---eEEEEEcCC--CCCccEEEEEEec
Confidence 9999999999999999988876655555433 3 356679999 9999999999973
No 43
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=97.22 E-value=0.0013 Score=63.04 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=71.8
Q ss_pred CCCccccccCC----Ce--EEE--ecCcEEEEecCCCCCC------------c-----------eEEEEeCCCCCCccCC
Q 018769 212 GKCCLCEVQPK----DL--QID--VTTHFISIVPFAATFP------------F-----------EIWIIPRNHSSHFHEL 260 (350)
Q Consensus 212 g~c~fc~ii~~----E~--iV~--e~~~~iaf~p~~p~~p------------~-----------e~~IiPkrH~~~~~~l 260 (350)
..|+||.--.. |+ ++. .+-.+.+|..-+|..+ + +|+|.+.+|..++.+|
T Consensus 61 ~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~l 140 (351)
T 1z84_A 61 SSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDI 140 (351)
T ss_dssp CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGS
T ss_pred CCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHC
Confidence 46999974322 22 111 2345788888888873 3 8899999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCCCceeceEEEEEe
Q 018769 261 DNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDTQLAYIHWFLQIV 314 (350)
Q Consensus 261 ~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~~~~~~H~Hihii 314 (350)
+.+++.++.++.++-.+.|.+..+....+++.|.++..|. +..|.|.+|+
T Consensus 141 s~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGa----Sl~HpH~QI~ 190 (351)
T 1z84_A 141 DPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGA----SMSHSHSQMM 190 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTC----CCSSCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCC----CCcCccceeE
Confidence 9999999999888877777654444577788888887764 3557777665
No 44
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=96.99 E-value=0.0028 Score=52.76 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=51.5
Q ss_pred ceEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceecC
Q 018769 121 FHDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLAL 190 (350)
Q Consensus 121 ~heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a~ 190 (350)
.|-+|| ..+|..++.+|+.+++..++.+.+.-.+.|.+.-+..-+.+.-|.|+.+|.++.|-|.+|+.-
T Consensus 34 gh~LVi-Pk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~agq~v~HlH~HiiPr 102 (147)
T 1fit_A 34 GHVLVC-PLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPR 102 (147)
T ss_dssp TCEEEE-ESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTCCSSSCCEEEEEE
T ss_pred cEEEEE-EccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCccEEEEEEECC
Confidence 355554 568999999999999999988877766666531111124455689999999999999999863
No 45
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=96.61 E-value=0.0035 Score=52.58 Aligned_cols=59 Identities=25% Similarity=0.324 Sum_probs=43.2
Q ss_pred eEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh---cCCCccEEEEecccCccCCCCCcccccceec
Q 018769 122 HDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIK---EYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 122 heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~---~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|-+|| ..+|..++.+++.++...++.+.+.-.+.|+ ..+++.++ .+|.+..|-|.+|+.
T Consensus 42 h~LVi-Pk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g~ni~--------~~gq~v~HlHiHiiP 103 (154)
T 2oik_A 42 FCRVI-LNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDKINLA--------SLGNMTPHVHWHVIP 103 (154)
T ss_dssp CEEEE-ESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEE--------ECCSSSCSCEEEEEE
T ss_pred EEEEE-ecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEhH--------HhCCCCCEEEEEEeC
Confidence 54444 5689999999999999888876666555543 33445443 478899999999985
No 46
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=96.45 E-value=0.0026 Score=52.40 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=63.2
Q ss_pred CCCCCCCCCCCCCCCc-eeccCCCCCCCcEEEEEecCCCccccCCCCCCCCCCcccccccCCCceeeecccceEEEEeCC
Q 018769 51 SSCPFCIGNEHECAPE-IFRVPPDPKSDWKIRVIQNLYPALSRDIGCKKDGDPDAEMRCTGDLGRVVTGFGFHDVVIESP 129 (350)
Q Consensus 51 ~~CPFC~g~e~~t~~e-i~~~~~~~~~~w~~~v~~N~fP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~heVIiesp 129 (350)
..|+||.--..+.+.. +++ + . .+.+|-|.+|... .|-+| -..
T Consensus 5 ~~CiFC~i~~~e~p~~iV~e--~-~----~~~af~d~~P~~p-----------------------------gH~LV-iPk 47 (138)
T 3p0t_A 5 MASIFTKIINRELPGRFVYE--D-D----DVVAFLTIEPMTQ-----------------------------GHTLV-VPR 47 (138)
T ss_dssp HHHHHHHHHTTSSCCCEEEE--C-S----SEEEEECSSCSST-----------------------------TCEEE-EES
T ss_pred CCChhhHHhcCCCCcCEEEe--C-C----CEEEEecCCCCCC-----------------------------cEEEE-EEh
Confidence 3599996333333333 332 2 2 5788889999732 24444 456
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHHh---cCCCccEEEEecccCccCCCCCcccccceec
Q 018769 130 VHSVQLQDLEPREVGEVLLACKKRIEQIK---EYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 130 ~H~~~l~~~~~~~~~~~l~~~~~r~~~l~---~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
+|..++.+++.+++..++.+.+.-.+.|+ ...++.|. .+|.++.|-|..|+.
T Consensus 48 ~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n~~--------~~gq~v~HlH~HiiP 102 (138)
T 3p0t_A 48 EEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERSGLI--------IAGLEVPHLHVHVFP 102 (138)
T ss_dssp SCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE--------ECCSSCSSCCEEEEE
T ss_pred HHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCCcEE--------ECCcccCEEEEEEec
Confidence 99999999999999999988877655553 22333332 489999999998874
No 47
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=94.77 E-value=0.092 Score=43.10 Aligned_cols=62 Identities=13% Similarity=0.059 Sum_probs=45.4
Q ss_pred eEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 122 HDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 122 heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|-+| -..+|..++.+++.++...++.....-.+.+++.-+..-+ |.| .+|.++.|-|.-|+.
T Consensus 35 h~lV-~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~----N~~-~aGq~V~HlH~HviP 96 (137)
T 3ohe_A 35 VILV-PRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKM----NVA-ALGNMVPQLHLHHIV 96 (137)
T ss_dssp EEEE-ESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEE----EEE-ECCSSCCSCCEEEEE
T ss_pred EEEE-ecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeE----EEe-eccCcCCEEEEEEeC
Confidence 5444 3449999999999999888887776666655433222222 666 899999999998875
No 48
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.12 Score=42.31 Aligned_cols=63 Identities=13% Similarity=0.197 Sum_probs=44.6
Q ss_pred eEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 122 HDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 122 heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|-+||=..+|..++.+++.++...++.....-.+.+++.-+..-+ |.| .+|.+++|-|.-|+.
T Consensus 36 ~~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~----N~~-~aGq~V~HlH~HviP 98 (135)
T 3nrd_A 36 WLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKI----NIG-ALGNIVRQLHVHVIA 98 (135)
T ss_dssp EEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE----EEE-ECCSSCCSCCEEEEE
T ss_pred EEEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeE----EEe-eccCCCCEEEEEEec
Confidence 435554337999999999999888888777665555422111112 667 899999999998875
No 49
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=93.45 E-value=0.16 Score=42.24 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=43.3
Q ss_pred eEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 122 HDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 122 heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|-|| -..+|..++.+++.++...++.....-.+.+++.-+..-+ |.| .+|.+++|-|.-|+.
T Consensus 35 h~LV-~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~----Ni~-~aGq~V~HlH~HvIP 96 (149)
T 3i24_A 35 LILV-PRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKI----NIG-ALGNLVPQLHIHHIA 96 (149)
T ss_dssp EEEE-ESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEE----EEE-ECCSSCCSCCEEEEE
T ss_pred EEEE-eCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeE----EEh-hhhCCCCEEEEEEeC
Confidence 5444 3336999999999999888887776655555422112222 666 499999999998875
No 50
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=92.49 E-value=0.33 Score=40.37 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=45.3
Q ss_pred eEEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCccEEEEecccCccCCCCCcccccceec
Q 018769 122 HDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNHGASAGASMSHSHSQLLA 189 (350)
Q Consensus 122 heVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~~~~~~yv~iFkN~G~~aGaSl~HpH~Qi~a 189 (350)
|-+||=-..|..++.+++.++...++.+.+.-.+.+++.-+..=+ |.| .+|.++.|-|.-|+.
T Consensus 39 H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~----N~~-~aGq~V~HlH~HvIP 101 (149)
T 3i4s_A 39 WLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKL----NIA-ALGNLVPQLHVHIIA 101 (149)
T ss_dssp EEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE----EEE-ECCSSCCSCCEEEEE
T ss_pred EEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeE----EEe-ecCCcCCEEEEEEEC
Confidence 655544433899999999999999888877766666432111111 665 899999999999985
No 51
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=87.30 E-value=0.7 Score=43.74 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=47.1
Q ss_pred EEEEeCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc--CCCccEEEEecccCccCC--CCCcccccceec
Q 018769 123 DVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKE--YDLIKYVQVFKNHGASAG--ASMSHSHSQLLA 189 (350)
Q Consensus 123 eVIiesp~H~~~l~~~~~~~~~~~l~~~~~r~~~l~~--~~~~~yv~iFkN~G~~aG--aSl~HpH~Qi~a 189 (350)
+|+|-..+|..+|.+++.+++..+..+.++-.+.+.+ .....| .+..|.|+..| -+..|-|..|+.
T Consensus 232 h~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Y-n~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 232 ETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY-SMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCE-EEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred EEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCe-EEEEEeCCCCCCCCcccEEEEEEec
Confidence 4555667999999999999998888776654444432 122334 45678888876 477899999987
No 52
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=73.42 E-value=4.4 Score=35.83 Aligned_cols=69 Identities=7% Similarity=0.128 Sum_probs=42.3
Q ss_pred EEEecCcEEEEecCCCCCCceEEEEeCCCCCCccC---CCHHHHHHHHHHHH---HHHHHHHHHcCCCCeEEEEEcC
Q 018769 225 QIDVTTHFISIVPFAATFPFEIWIIPRNHSSHFHE---LDNEKAVDLGGLLK---LTLRKISVQLNNPPFNFMIQTA 295 (350)
Q Consensus 225 iV~e~~~~iaf~p~~p~~p~e~~IiPkrH~~~~~~---l~~~e~~~La~~l~---~v~~~l~~~~~~~~yN~~~~~~ 295 (350)
.|....++++|.+ ...|.|.++||...++.+++ +++..-.-++..-+ .+.+++.+-+.....-+.+|..
T Consensus 33 ~Vd~~~gyvvlKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~ 107 (227)
T 2pof_A 33 EVKPNAGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSR 107 (227)
T ss_dssp EEETTTTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCG
T ss_pred eEccCCCEEEEeC--CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCC
Confidence 3555677888887 55789999999888877764 22222222333322 3555555544444677888764
No 53
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=58.75 E-value=7.5 Score=29.45 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=25.7
Q ss_pred CCCCCCCCCCCCeeeccCCCCeEEEEccccCCC
Q 018769 3 SPSSTQTQSRSPEIRKDPVNNRWVIFSPARAKR 35 (350)
Q Consensus 3 ~~~~~~~~~~~~e~R~dpltg~~viia~~R~~R 35 (350)
++++.-.....-.+|+|+..|.||+.+|++.-.
T Consensus 8 ~~~~~p~l~~~~rl~~d~~~~~~VlL~peg~i~ 40 (95)
T 3g2b_A 8 SRDSCPALRAGVRLQHDRARDQWVLLAPERVVE 40 (95)
T ss_dssp CTTCCCCCCTTCEEEEEGGGTEEEEECCCCCCC
T ss_pred CCcCCceeCCCeEEEEeccCCcEEEECCCceee
Confidence 455555566667899999999999999987543
No 54
>1vr7_A Adometdc, samdc, S-adenosylmethionine decarboxylase proenzyme; TM0655, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.20A {Thermotoga maritima} SCOP: d.156.1.2 PDB: 1tlu_A 1tmi_A 3iwc_A* 3iwb_A* 3iwd_A* 3iwc_B* 3iwb_B* 3iwd_B*
Probab=33.19 E-value=1e+02 Score=24.96 Aligned_cols=90 Identities=10% Similarity=0.014 Sum_probs=52.9
Q ss_pred CCccCCCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEEEcCCCCccCC--CceeceEEEEEecCCCCCccccccccCCCC
Q 018769 255 SHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNFMIQTAPLQAIDT--QLAYIHWFLQIVPQLAGVGGFEIGTGCYIN 332 (350)
Q Consensus 255 ~~~~~l~~~e~~~La~~l~~v~~~l~~~~~~~~yN~~~~~~p~~~~~~--~~~~~H~HihiiPR~~~~aG~El~~g~~in 332 (350)
.++.+.+.+-+.+...+-+.+..+. +..|..-.+..+|.-...|-+. --.-.|+-||-.|-+.+ +...+.+ .+
T Consensus 22 ~DlygC~~~~L~D~e~l~~~l~eAa-~~~gatvl~~~~h~F~P~GvSgvvllaESHIsIHTwPE~gy-AavDVft---Cg 96 (142)
T 1vr7_A 22 AEFYECDREVLDNVQLIEQEMKQAA-YESGATIVTSTFHRFLPYGVSGVVVISESHLTIHTWPEYGY-AAIDLFT---CG 96 (142)
T ss_dssp EEEESCCHHHHTCHHHHHHHHHHHH-HHHTCCEEEEEEEECSSSCEEEEEEETTEEEEEEEEGGGTE-EEEEEEE---ES
T ss_pred EEEcCCChHHCCCHHHHHHHHHHHH-HHcCCEEeEEEEEEcCCCCeEEEEEecccEEEEEeCCCCCe-EEEEEEc---cC
Confidence 3566777766666544333333333 3346656777776532122110 00115999999998763 5566665 33
Q ss_pred C-CcHHHHHHHHHhccCC
Q 018769 333 P-VFSEDAAKVMQEVNVP 349 (350)
Q Consensus 333 ~-~~PE~aA~~Lr~~~~~ 349 (350)
+ ++|+.+.+.|++...+
T Consensus 97 ~~~~P~~a~~~L~~~f~a 114 (142)
T 1vr7_A 97 EDVDPWKAFEHLKKALKA 114 (142)
T ss_dssp TTCCHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHhCC
Confidence 4 5899999999976544
No 55
>3hr5_R M1prime-derived peptide; FAB-peptide complex, immune system; 2.40A {Mus musculus}
Probab=31.79 E-value=15 Score=21.60 Aligned_cols=12 Identities=33% Similarity=0.592 Sum_probs=9.3
Q ss_pred ccCCCCCccccc
Q 018769 174 ASAGASMSHSHS 185 (350)
Q Consensus 174 ~~aGaSl~HpH~ 185 (350)
+.||+|.+||-.
T Consensus 23 raaggsvphprc 34 (35)
T 3hr5_R 23 RAAGGSVPHPRC 34 (35)
T ss_pred cccCCCCCCCCC
Confidence 468999999853
No 56
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=30.38 E-value=17 Score=31.64 Aligned_cols=44 Identities=18% Similarity=0.333 Sum_probs=34.0
Q ss_pred ecccCccCCCCCcccccceecCCCCChHHHHHHHHHHHHHhhcCCCccc
Q 018769 169 FKNHGASAGASMSHSHSQLLALPVIPPTISARINSTKEYFDQTGKCCLC 217 (350)
Q Consensus 169 FkN~G~~aGaSl~HpH~Qi~a~~~~p~~~~~~~~~~~~y~~~~g~c~fc 217 (350)
+-|.|.-+|-|+.|-|.-+++.++..+.++. +++|+....-+|-
T Consensus 104 ~i~~GfHa~PSm~HLHLHVIS~Df~s~~lK~-----kkH~NSF~T~fFv 147 (204)
T 3sp4_A 104 YIKVGFHAGPSMNNLHLHIMTLDHVSPSLKN-----SAHYISFTSPFFV 147 (204)
T ss_dssp TEEEEEESSCSSSSCCEEEEESCCCCTTCCS-----HHHHHHHHSTTEE
T ss_pred eEeccCCCCCcccceeEEEeccCCCChhhCc-----cchhcccChhhhc
Confidence 4599999999999999999999999885543 4567765433443
No 57
>2iii_A S-adenosylmethionine decarboxylase proenzyme; two-layer alpha beta-sandwich, structural genomics, NPPSFA; 2.30A {Aquifex aeolicus}
Probab=25.76 E-value=1.1e+02 Score=24.40 Aligned_cols=64 Identities=13% Similarity=-0.036 Sum_probs=39.2
Q ss_pred HcCCCCeEEEEEcCCCCccCC--CceeceEEEEEecCCCCCccccccccCCCCC-CcHHHHHHHHHhccCC
Q 018769 282 QLNNPPFNFMIQTAPLQAIDT--QLAYIHWFLQIVPQLAGVGGFEIGTGCYINP-VFSEDAAKVMQEVNVP 349 (350)
Q Consensus 282 ~~~~~~yN~~~~~~p~~~~~~--~~~~~H~HihiiPR~~~~aG~El~~g~~in~-~~PE~aA~~Lr~~~~~ 349 (350)
..|..-.+..+|.-...|-+. --.-.|+-||-.|-+.+ +...+.+ .++ ..|+.+.+.|++...+
T Consensus 37 ~~gatvl~~~~h~F~P~GvSgvvllaESHisIHTwPE~gy-aavDvft---Cg~~~~P~~a~~~l~~~f~a 103 (135)
T 2iii_A 37 YANLTKISSHYYQFQPHGATGVVLLAESHISIHTWPEHGL-ATVDVYT---CGDPSKAYRAMDYIITQLNP 103 (135)
T ss_dssp HTTCCEEEEEEEECSSSCEEEEEEEC-CEEEEEEEGGGTE-EEEEEEE---ESCHHHHHHHHHHHHHHHCC
T ss_pred HcCCEEEEEEEEEcCCCCeEEEEEecccEEEEEeCCCCCc-EEEEEEc---cCCCCCHHHHHHHHHHHhCC
Confidence 345556666666532122110 00126999999998764 4566665 344 6899999999976544
Done!