BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018775
(350 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 256 bits (655), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 207/330 (62%), Gaps = 15/330 (4%)
Query: 16 QLMFAFADSMALKSAVELRLADIMHSHG-----SPITLPQLASRIDSSCPDIPY-LARLM 69
QL A M LKSA+EL L +I+ G SPI ++AS++ ++ PD P L R++
Sbjct: 25 QLASASVLPMILKSALELDLLEIIAKAGPGAQISPI---EIASQLPTTNPDAPVMLDRML 81
Query: 70 RMLVRKGIF--AVHQSSDGGDETLYKMTHISKWLLHDSE-LSLAPMILVENNQWLLEPWH 126
R+L I +V DG + LY + ++K+L+ + + +S++ + L+ ++ L+E W+
Sbjct: 82 RLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWY 141
Query: 127 YLSQCVKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDS 186
+L V +GGI F KA+G +++ P+FN +FN M+ + I MK ++ Y GF+
Sbjct: 142 HLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYT-GFEG 200
Query: 187 IQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDAIPKAD 246
++SL DVGGGTG + IV YP IKGINFDLPHV+ AP G+ HVGGDMF +IPKAD
Sbjct: 201 LKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKAD 260
Query: 247 AVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLV-FDLV 305
AVFMKWI HDW DE C+K LKNC +A+PD +GK+++ E ++ ++ G+V D++
Sbjct: 261 AVFMKWICHDWSDEHCLKFLKNCYEALPD-NGKVIVAECILPVAPDSSLATKGVVHIDVI 319
Query: 306 MFAHTTGGKERTEQEWMKLLEQGGFHRCKI 335
M AH GGKERT++E+ L + GF K+
Sbjct: 320 MLAHNPGGKERTQKEFEDLAKGAGFQGFKV 349
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 200/330 (60%), Gaps = 10/330 (3%)
Query: 16 QLMFAFADSMALKSAVELRLADIMHSHGSP---ITLPQLASRIDSSCPDIPY-LARLMRM 71
QL A MALK+A+EL + +IM P I+ ++A+++ ++ P+ P L R++R+
Sbjct: 27 QLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRL 86
Query: 72 LVRKGI--FAVHQSSDGGDETLYKMTHISKWLLHDSE-LSLAPMILVENNQWLLEPWHYL 128
L + + + + G E LY + + K+L + + +SLAP +L+ ++ LLEPW YL
Sbjct: 87 LASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYL 146
Query: 129 SQCVKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQ 188
+ EGGI F KA+G I+D+ + N +FN M+ + I MK ++ Y +GF+ +
Sbjct: 147 KDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMY-NGFEGLT 205
Query: 189 SLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDAIPKADAV 248
++ DVGGGTG + IV YP I INFDLPHV+ AP G+ H+GGDMFD +PK DA+
Sbjct: 206 TIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAI 265
Query: 249 FMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGN-NIFGDMGLVFDLVMF 307
F+KWI HDW DE C+K+LKNC A+PD GK+++ E ++ + +I + + D +M
Sbjct: 266 FIKWICHDWSDEHCLKLLKNCYAALPDH-GKVIVAEYILPPSPDPSIATKVVIHTDALML 324
Query: 308 AHTTGGKERTEQEWMKLLEQGGFHRCKIIS 337
A+ GGKERTE+E+ L GF K+ S
Sbjct: 325 AYNPGGKERTEKEFQALAMASGFRGFKVAS 354
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 207/352 (58%), Gaps = 14/352 (3%)
Query: 6 ELLRGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYL 65
E+ + QA +++ M+AF DSM+LK ++E+ + +I+H+HG PITL L S + + +
Sbjct: 12 EIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDNV 71
Query: 66 ARLMRMLVRKGIFAVHQSSD-GGDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEP 124
RLMR L G F + + + +E Y +T S+ L+ +EL LAPM+ + L
Sbjct: 72 QRLMRYLAHNGFFEIITNQELENEEEAYALTVASELLVKGTELCLAPMVECVLDPTLSTS 131
Query: 125 WHYLSQCVKEGGIA-FKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDG 183
+H L + V E + F GC++W+F +++P++N L+NDA+A +K++ A+ KD
Sbjct: 132 FHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAM----KDC 187
Query: 184 ---FDSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFD 240
F+ ++S+ DVGGG G I +++P + + FD P VV + +VGGDMF
Sbjct: 188 NLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFI 247
Query: 241 AIPKADAVFMKWILHDWDDEACVKILKNCRQAIPD--KSGKLVLVEIVVQEDGN-NIFGD 297
++PKADAV +K +LHDW D+ C+KILK C++A+ K GK++++++V+ E + N
Sbjct: 248 SVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQ 307
Query: 298 MGLVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
+ L+ ++ + GKER E+EW KL + GF KI L S+IE YP
Sbjct: 308 IKLLMNVTI--SCVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 201/351 (57%), Gaps = 17/351 (4%)
Query: 6 ELLRGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYL 65
E+ + QA +++ ++AF DSM+LK AVE+ + +I+ +HG PI+L L S + I +
Sbjct: 12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV 71
Query: 66 ARLMRMLVRKGIFAVHQSSDGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEPW 125
RLMR L G F + +E Y +T S+ L+ S+L LAPM+ + L +
Sbjct: 72 RRLMRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSY 127
Query: 126 HYLSQCVKEGGIA-FKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDG- 183
H L + + E + F G WDF ++P++N FNDAMA +K++ AL +D
Sbjct: 128 HELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLAL----RDCD 183
Query: 184 --FDSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDA 241
FD ++S+ DVGGGTG I +++P +K I FD P VV + +VGGDMF +
Sbjct: 184 FVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTS 243
Query: 242 IPKADAVFMKWILHDWDDEACVKILKNCRQAIPD--KSGKLVLVEIVV-QEDGNNIFGDM 298
IP ADAV +K+ILH+W D+ C++ILK C++A+ + K GK+ ++++V+ ++ N +
Sbjct: 244 IPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQI 303
Query: 299 GLVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
L+ D+ M GKER E+EW KL + GF KI + S+IE YP
Sbjct: 304 KLLMDVNM--ACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 189/326 (57%), Gaps = 9/326 (2%)
Query: 16 QLMFAFADSMALKSAVELRLADIM-HSHGSPITLPQLASRIDSSC-PDIPYLA-RLMRML 72
QL + M LK+A+EL L +I+ + G +T ++A+++ S+ P+ P + R++R+L
Sbjct: 26 QLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLL 85
Query: 73 VRKGIFA--VHQSSDGGDETLYKMTHISKWLLHDSE-LSLAPMILVENNQWLLEPWHYLS 129
+ V + DG Y + K+L + + +S+A + L+ ++ L+E W+YL
Sbjct: 86 ASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLK 145
Query: 130 QCVKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQS 189
V +GGI F KA+G +++ P+FN +FN+ M + I+ K L+ Y GF+ + +
Sbjct: 146 DAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYH-GFEGLGT 204
Query: 190 LADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDAIPKADAVF 249
L DVGGG G +A I YP IKG+NFDLPHV++ AP G+ HVGGDMF +P D +
Sbjct: 205 LVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTIL 264
Query: 250 MKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLV-FDLVMFA 308
MKWILHDW D+ C +LKNC A+P GK+VLV+ ++ + G+ D++M A
Sbjct: 265 MKWILHDWSDQHCATLLKNCYDALP-AHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLA 323
Query: 309 HTTGGKERTEQEWMKLLEQGGFHRCK 334
H GG+ER E+E+ L GF K
Sbjct: 324 HNPGGRERYEREFQALARGAGFTGVK 349
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 193/351 (54%), Gaps = 17/351 (4%)
Query: 6 ELLRGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYL 65
E+ + QA +++ ++AF DS +LK AVE + +I+ +HG PI+L L S + I +
Sbjct: 12 EIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV 71
Query: 66 ARLMRMLVRKGIFAVHQSSDGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEPW 125
RL R L G F + +E Y +T S+ L+ S+L LAP + + L +
Sbjct: 72 RRLXRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPXVECVLDPTLSGSY 127
Query: 126 HYLSQCVKEGGIA-FKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDG- 183
H L + + E + F G WDF ++P++N FNDA A +K++ AL +D
Sbjct: 128 HELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLINLAL----RDCD 183
Query: 184 --FDSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDA 241
FD ++S+ DVGGGTG I +++P +K I FD P VV + +VGGD F +
Sbjct: 184 FVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTS 243
Query: 242 IPKADAVFMKWILHDWDDEACVKILKNCRQAIPD--KSGKLVLVEIVV-QEDGNNIFGDM 298
IP ADAV +K+ILH+W D+ C++ILK C++A+ + K GK+ +++ V+ ++ N +
Sbjct: 244 IPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDENQVTQI 303
Query: 299 GLVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
L+ D + GKER E+EW KL + GF KI + S+IE YP
Sbjct: 304 KLLXD--VNXACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 197/355 (55%), Gaps = 13/355 (3%)
Query: 6 ELLRGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYL 65
EL Q +++ ++ F SMALKSA+EL +AD +H+HG P+TL +LAS + + L
Sbjct: 2 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 61
Query: 66 ARLMRMLVRKGIFA----VHQSSDGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWL 121
R +R+L G FA + D +E Y +T SK L+ L+ ++ +
Sbjct: 62 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 121
Query: 122 LEPWHYLSQCVKEGG--IAFKKAHGCEIWDFASQSPQFNNL--FNDAMACTAKIVMKALV 177
L+ W + E F+ A G WDF ++ + + L F DAMA +++ K ++
Sbjct: 122 LDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FKLVL 180
Query: 178 SHYKDGFDSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGD 237
K F+ ++SL DVGGGTGG I + +PH+K FD P VV E + VGGD
Sbjct: 181 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 240
Query: 238 MFDAIPKADAVFMKWILHDWDDEACVKILKNCRQAIPD--KSGKLVLVEIVVQEDGNNI- 294
MF +IP ADAV +KW+LHDW+DE +KILKN ++AI K GK+++++I + E ++
Sbjct: 241 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 300
Query: 295 FGDMGLVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
++ L +DLVM GKERT+QEW KL+ GF KI + S+IE YP
Sbjct: 301 LTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 354
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 197/355 (55%), Gaps = 13/355 (3%)
Query: 6 ELLRGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYL 65
EL Q +++ ++ F SMALKSA+EL +AD +H+HG P+TL +LAS + + L
Sbjct: 5 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 64
Query: 66 ARLMRMLVRKGIFA----VHQSSDGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWL 121
R +R+L G FA + D +E Y +T SK L+ L+ ++ +
Sbjct: 65 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 124
Query: 122 LEPWHYLSQCVKEGG--IAFKKAHGCEIWDFASQSPQFNNL--FNDAMACTAKIVMKALV 177
L+ W + E F+ A G WDF ++ + + L F DAMA +++ K ++
Sbjct: 125 LDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FKLVL 183
Query: 178 SHYKDGFDSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGD 237
K F+ ++SL DVGGGTGG I + +PH+K FD P VV E + VGGD
Sbjct: 184 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 243
Query: 238 MFDAIPKADAVFMKWILHDWDDEACVKILKNCRQAIPD--KSGKLVLVEIVVQEDGNNI- 294
MF +IP ADAV +KW+LHDW+DE +KILKN ++AI K GK+++++I + E ++
Sbjct: 244 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 303
Query: 295 FGDMGLVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
++ L +DLVM GKERT+QEW KL+ GF KI + S+IE YP
Sbjct: 304 LTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 357
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 197/355 (55%), Gaps = 13/355 (3%)
Query: 6 ELLRGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYL 65
EL Q +++ ++ F SMALKSA+EL +AD +H+HG P+TL +LAS + + L
Sbjct: 6 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 65
Query: 66 ARLMRMLVRKGIFA----VHQSSDGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWL 121
R +R+L G FA + D +E Y +T SK L+ L+ ++ +
Sbjct: 66 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 125
Query: 122 LEPWHYLSQCVKEGG--IAFKKAHGCEIWDFASQSPQFNNL--FNDAMACTAKIVMKALV 177
L+ W + E F+ A G WDF ++ + + L F DAMA +++ K ++
Sbjct: 126 LDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FKLVL 184
Query: 178 SHYKDGFDSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGD 237
K F+ ++SL DVGGGTGG I + +PH+K FD P VV E + VGGD
Sbjct: 185 QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 244
Query: 238 MFDAIPKADAVFMKWILHDWDDEACVKILKNCRQAIPD--KSGKLVLVEIVVQEDGNNI- 294
MF +IP ADAV +KW+LHDW+DE +KILKN ++AI K GK+++++I + E ++
Sbjct: 245 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 304
Query: 295 FGDMGLVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
++ L +DLVM GKERT+QEW KL+ GF KI + S+IE YP
Sbjct: 305 LTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 179/320 (55%), Gaps = 14/320 (4%)
Query: 27 LKSAVELRLADIMHSHGSP---ITLPQLASRIDSSC--PDIP-YLARLMRMLVRKGIFAV 80
L +A++L L +I+ P ++ ++AS++ +S D+P L R++R+L +
Sbjct: 41 LNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTS 100
Query: 81 HQSS--DGGDETLYKMTHISKWLLHD-SELSLAPMILVENNQWLLEPWHYLSQCVKEGGI 137
+ DGG E +Y ++ + K+L+ D S LA LL+ W + V + I
Sbjct: 101 TTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDI 160
Query: 138 -AFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGGG 196
FK HG ++F + + N +FN +M MK ++ Y GF+ I +L DVGGG
Sbjct: 161 DLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGG 219
Query: 197 TGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDAIPKADAVFMKWILHD 256
+G L I+ YP IKGINFDLP V+ AP GI HVGGDMF ++P+ DA+ +K + H+
Sbjct: 220 SGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHN 279
Query: 257 WDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNI-FGDMGLVFDLVMFAHTTGGKE 315
W DE C++ L NC +A+ +GK+++VE ++ E+ N + D +MF T GG+E
Sbjct: 280 WSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRE 337
Query: 316 RTEQEWMKLLEQGGFHRCKI 335
RTE+++ KL + GF + ++
Sbjct: 338 RTEKQYEKLSKLSGFSKFQV 357
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 170/322 (52%), Gaps = 18/322 (5%)
Query: 27 LKSAVELRLADIMHSHGSP---ITLPQLASRIDSSC--PDIPYLARLMRMLVRKGIFAVH 81
L +A++L L +I+ P + ++AS++ +S D+P L+ ++V
Sbjct: 41 LNAAIDLNLFEIIAKATPPGAFXSPSEIASKLPASTQHSDLPNRLDRXLRLLAS--YSVL 98
Query: 82 QSS-----DGGDETLYKMTHISKWLLHD-SELSLAPMILVENNQWLLEPWHYLSQCVKEG 135
S+ DGG E +Y ++ + K+L+ D S LA LL+ W + V +
Sbjct: 99 TSTTRTIEDGGAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDE 158
Query: 136 GI-AFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVG 194
I FK HG ++F + + N +FN + K + Y GF+ I +L DVG
Sbjct: 159 DIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYT-GFEGISTLVDVG 217
Query: 195 GGTGGALAEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFDAIPKADAVFMKWIL 254
GG+G L I+ YP IKGINFDLP V+ AP GI HVGGD F ++P+ DA +K +
Sbjct: 218 GGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVC 277
Query: 255 HDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNI-FGDMGLVFDLVMFAHTTGG 313
H+W DE C++ L NC +A+ +GK+++VE ++ E+ N + D + F T GG
Sbjct: 278 HNWSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLXFI-TVGG 335
Query: 314 KERTEQEWMKLLEQGGFHRCKI 335
+ERTE+++ KL + GF + ++
Sbjct: 336 RERTEKQYEKLSKLSGFSKFQV 357
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 16/255 (6%)
Query: 85 DGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEPWHYLSQCVKEGGIAFKKAHG 144
D G + L+ +S LL D +A + W W L+ V+ G +F A+G
Sbjct: 103 DLGHDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGEASFDVANG 162
Query: 145 CEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGGGTGGALAEI 204
W + P+ LFN A + + + Y F + D+GGG G A +
Sbjct: 163 TSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYD--FSGAATAVDIGGGRGSLXAAV 220
Query: 205 VKSYPHIKGINFDLPHVVATAP---VCEGIFH----VGGDMFDAIPK-ADAVFMKWILHD 256
+ ++P ++G + P V A G+ + GD F+ IP AD +K +LHD
Sbjct: 221 LDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHD 280
Query: 257 WDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLVFDLVMFAHTTGGKER 316
WDD+ V+IL+ A S LV+ ++ + + +F ++ GG ER
Sbjct: 281 WDDDDVVRILRRIATAXKPDSRLLVIDNLIDERPAAST------LFVDLLLLVLVGGAER 334
Query: 317 TEQEWMKLLEQGGFH 331
+E E+ LLE+ G
Sbjct: 335 SESEFAALLEKSGLR 349
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 19/290 (6%)
Query: 65 LARLMRMLVRKGIFAVHQSSDGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEP 124
L R++R+L + + + SDG + +T L DS + IL +
Sbjct: 72 LRRVLRLLAVRDVV---RESDG----RFALTDKGAALRSDSPVPARAGILXFTDTXFWTX 124
Query: 125 WHYLSQCVKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGF 184
H ++ + AF G + + + L+ + + + L+ F
Sbjct: 125 SHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGXETVS--AAEHLILARAGDF 182
Query: 185 DSIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVVAT----APVCEGIFHV-GGDMF 239
+ ++ADVGGG GG L +++ +P ++G+ D VVA AP G + V GD
Sbjct: 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL 242
Query: 240 DAIPKADAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMG 299
+P AD +K ILH+W DE V+IL NCR+ P G++++++ VV E GN+
Sbjct: 243 REVPHADVHVLKRILHNWGDEDSVRILTNCRRVXP-AHGRVLVIDAVVPE-GNDAH--QS 298
Query: 300 LVFDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEAYP 349
D A T G+ERT E L G +++ ++ SI P
Sbjct: 299 KEXDFXXLAART-GQERTAAELEPLFTAAGLRLDRVVGTSSVXSIAVGVP 347
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 143/344 (41%), Gaps = 44/344 (12%)
Query: 25 MALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYLARLMRMLVRKGIFAVHQSS 84
MAL+ A LRL D H TL LA R D+ L+RL+R L G+
Sbjct: 31 MALRVAATLRLVD--HLLAGADTLAGLADRTDTHPQ---ALSRLVRHLTVVGVL------ 79
Query: 85 DGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWL-LE--------PWHYLSQCVKEG 135
+GG++ + +L LA + WL L + L V+ G
Sbjct: 80 EGGEKQGRPLRPTRLGML------LADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTG 133
Query: 136 GIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGG 195
A+ +G W+ S + F+ M+C + +A Y + +++ + DVGG
Sbjct: 134 RPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD--WSAVRHVLDVGG 191
Query: 196 GTGGALAEIVKSYPHIKGINFDLP-------HVVATAPVCEGIFHVGGDMFDAIP-KADA 247
G GG LA I PH++G +L A A + + + GD F +P AD
Sbjct: 192 GNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADV 251
Query: 248 VFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLVFDLVMF 307
V + ++L +W DE + IL+ C +A+ LVL V+ DG + F + DL M
Sbjct: 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRF--FSTLLDLRML 309
Query: 308 AHTTGGKERTEQEWMKLLEQGGF-----HRCKIISMPALYSIIE 346
GG+ RT E + L G ++P +SI+E
Sbjct: 310 TF-MGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILE 352
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 30/326 (9%)
Query: 30 AVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYLARLMRMLVRKGIFAVHQSSDGGDE 89
A L LAD++ S + LA+ + S D + RLMR+LV IF + DG
Sbjct: 28 ATRLGLADLIES--GIDSDETLAAAVGS---DAERIHRLMRLLVAFEIFQ-GDTRDG--- 78
Query: 90 TLYKMTHISKWLLHDSELSLAPMILVENNQWLLEPWHYLSQCVKEGGIAFKKAHGCEIWD 149
Y T S LL D E S M+L ++ W + + G F+ A G + +
Sbjct: 79 --YANTPTSH-LLRDVEGSFRDMVLFYGEEFH-AAWTPACEALLSGTPGFELAFGEDFYS 134
Query: 150 FASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGGGTGGALAEIVKSYP 209
+ + P F AM + + + D F +S DVGGG+G I+++ P
Sbjct: 135 YLKRCPDAGRRFLLAMKASNLAFHE--IPRLLD-FRG-RSFVDVGGGSGELTKAILQAEP 190
Query: 210 HIKGINFDLPHVVATAP-------VCEGIFHVGGDMFDAIP-KADAVFMKWILHDWDDEA 261
+G+ D + A E + VGGDM +P D + I+ D D+ A
Sbjct: 191 SARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAA 250
Query: 262 CVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLVFDLVMFAHTTGGKERTEQEW 321
+++L NCR+A+ G++V++E + + M +++D+ +F G+ RT +E
Sbjct: 251 SLRLLGNCREAMA-GDGRVVVIERTISASEPS---PMSVLWDVHLF-MACAGRHRTTEEV 305
Query: 322 MKLLEQGGFHRCKIISMPALYSIIEA 347
+ LL +GGF +I+ +P +I A
Sbjct: 306 VDLLGRGGFAVERIVDLPMETRMIVA 331
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 148/339 (43%), Gaps = 54/339 (15%)
Query: 25 MALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYLARLMRMLVRKGIFAVHQSS 84
M +++A LRL D H T+ LA+R D+ P+ L RL+R LV G+
Sbjct: 34 MVVRTAATLRLVD--HILAGARTVKALAARTDTR-PEA--LLRLIRHLVAIGLL----EE 84
Query: 85 DGGDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEPWHYLSQCVKEGGIAFKK--- 141
D E + T + + +L +++ WH L+Q V I+F +
Sbjct: 85 DAPGE--FVPTEVGE-------------LLADDHPAAQRAWHDLTQAVARADISFTRLPD 129
Query: 142 -----------AHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSL 190
+G ++ + P F+ +AC + A + Y + +++ +
Sbjct: 130 AIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD--WTNVRHV 187
Query: 191 ADVGGGTGGALAEIVKSYPHIKGINFDLPHVVATAP-------VCEGIFHVGGDMFDAIP 243
DVGGG GG A I + PH+ ++ V TA + + + V GD F+ +P
Sbjct: 188 LDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP 247
Query: 244 -KADAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQED-GNNIFGDMGLV 301
KADA+ + ++L +W D V+IL C +A+ + G++++ E ++D N F +
Sbjct: 248 RKADAIILSFVLLNWPDHDAVRILTRCAEAL-EPGGRILIHE---RDDLHENSFNEQFTE 303
Query: 302 FDLVMFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPA 340
DL M GG RT ++W L G ++ +P+
Sbjct: 304 LDLRMLVF-LGGALRTREKWDGLAASAGLVVEEVRQLPS 341
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 24/275 (8%)
Query: 87 GDETLYKMTHISKWLLHDSELSLAPMILVENNQWLLEPWHYLSQCVKEGGIAFKKAHG-- 144
G + Y+ T +S L + +L + W +L+ V+EG + + G
Sbjct: 79 GGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGHLADAVREGRNQYLETFGVP 138
Query: 145 -----CEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGGGTGG 199
I+ + QF + + + V+ A + D+GGG G
Sbjct: 139 AEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAF------DLSVFPLMCDLGGGAGA 192
Query: 200 ALAEIVKSYPHIKGINFDLPHVVATAPVC------EGIFHVGGDMF-DAIPKADAVFMKW 252
E + YP K FD+P VV TA E I GD F D +P+AD +
Sbjct: 193 LAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILAR 252
Query: 253 ILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLVFDLVMFAHTTG 312
+LHDW D C +L+ G LV +E ++ ED + ++ L M T
Sbjct: 253 VLHDWADGKCSHLLERIYHTCKPGGGILV-IESLLDEDRRGPL--LTQLYSLNMLVQTE- 308
Query: 313 GKERTEQEWMKLLEQGGFHRCKIISMPALYSIIEA 347
G+ERT + LL GF + A+Y I A
Sbjct: 309 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILA 343
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 142/348 (40%), Gaps = 54/348 (15%)
Query: 26 ALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYLARLMRMLVRKGIFAVHQSSD 85
AL+ A LRL D H TL LA R D+ L+RL+R L G+ +
Sbjct: 32 ALRVAATLRLVD--HLLAGADTLAGLADRTDTHPQ---ALSRLVRHLTVVGVL------E 80
Query: 86 GGDE-----------TLYKMTHISK---WLLHDSELSLAPMILVENNQWLLEPWHYLSQC 131
GG++ L H ++ WL + +S A + + L
Sbjct: 81 GGEKQGRPLRPTRLGXLLADGHPAQQRAWLDLNGAVSHADLA-----------FTGLLDV 129
Query: 132 VKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLA 191
V+ G A+ +G W+ S + F+ +C + +A Y + +++ +
Sbjct: 130 VRTGRPAYAGRYGRPFWEDLSADVALADSFDALXSCDEDLAYEAPADAYD--WSAVRHVL 187
Query: 192 DVGGGTGGALAEIVKSYPHIKGINFDLP-------HVVATAPVCEGIFHVGGDMFDAIP- 243
DVGGG GG LA I PH++G +L A A + + + GD F +P
Sbjct: 188 DVGGGNGGXLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPV 247
Query: 244 KADAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLVFD 303
AD V + ++L +W DE + IL+ C +A+ LVL V+ DG + F L
Sbjct: 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLR 307
Query: 304 LVMFAHTTGGKERTEQEWMKLLEQGGF-----HRCKIISMPALYSIIE 346
+ F GG+ RT E + L G ++P +SI+E
Sbjct: 308 XLTF---XGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILE 352
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 54/331 (16%)
Query: 21 FADSMALKSAVELRLAD-IMHSHGSPITLPQLASRIDSSCPDIPYLARLMRMLVRKGIFA 79
A MA++ A LR+AD I H + + A S L RL+R LV G+F
Sbjct: 16 LATPMAVRVAATLRVADHIAAGHRTAAEIASAAGAHADS------LDRLLRHLVAVGLF- 68
Query: 80 VHQSSDGGDETLYKMTHIS------------KWLLHDSELSLAPMILVENNQWLLEPWHY 127
+ DG + +Y +T KWL +S + + VE
Sbjct: 69 ---TRDG--QGVYGLTEFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVE----------- 112
Query: 128 LSQCVKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFDSI 187
L+ ++ G A+ +G W+ P + F+ M+ ++ + + Y + ++
Sbjct: 113 LAHSIRTGQPAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYD--WAAL 170
Query: 188 QSLADVGGGTGGALAEIVKSYPHIKGINFDL--PHVVATAPVCEGIFH-----VGGDMFD 240
+ DVGGG+GG L+ ++ ++ + G DL P A + V G FD
Sbjct: 171 GHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFD 230
Query: 241 AIPK-ADAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMG 299
+P A + +LHDWDD + V IL+ C +A SG +VLV V D + G
Sbjct: 231 PLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAA--GSGGVVLVIEAVAGDEH-----AG 283
Query: 300 LVFDLVMFAHTTGGKERTEQEWMKLLEQGGF 330
DL M + GGKER+ E +L Q G
Sbjct: 284 TGMDLRMLTY-FGGKERSLAELGELAAQAGL 313
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 139/328 (42%), Gaps = 42/328 (12%)
Query: 9 RGQAEVWQLMFAFADSMALKSAVELRLADIMHSHGSPITLPQLASRIDSSCPDIPYLARL 68
R V++ + F+ +K+A+EL L H P L LA+ S P + L
Sbjct: 33 RANELVFKGLIEFS---CMKAAIELDL--FSHMAEGPKDLATLAADTGSVPPRLEMLLET 87
Query: 69 MRMLVRKGIFAVHQSSDGGDETLYKMTHISKWLLHDS--ELSLAPMILVENNQWLLEPWH 126
+R + V DG + +T + ++ + E +L + + +L + ++
Sbjct: 88 LRQM------RVINLEDGK----WSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFY 137
Query: 127 Y-LSQCVKEGGIAFKKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHYKDGFD 185
LSQ V+ G FK + + + N F + AK ++ L+ K D
Sbjct: 138 MGLSQAVR-GQKNFKGQ-----VPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK--LD 189
Query: 186 SIQSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVV-------ATAPVCEGIFHVGGDM 238
++ + DVGGG G A ++K +P + +LP + A V + + + D+
Sbjct: 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDI 249
Query: 239 F-DAIPKADAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGD 297
+ ++ P+ADAV IL+ +++ + K A+ G+L+++++V+ + N F
Sbjct: 250 YKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAM-RSGGRLLILDMVIDDPENPNFDY 308
Query: 298 M-------GLVFDLVMFAHTTGGKERTE 318
+ G+ F ++ F KE E
Sbjct: 309 LSHYILGAGMPFSVLGFKEQARYKEILE 336
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 246 DAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIVVQEDGNNIFGDMGLVFDLV 305
D V + LH +D C ++L+ + A+ + GK+++ + + D I F LV
Sbjct: 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVE-GKVIVFDFIPNSD--RITPPDAAAFSLV 290
Query: 306 MFAHTTGGKERTEQEWMKLLEQGGFHRCKIISMPAL-YSIIEAY 348
A T G T E+ GF ++ S+P +I AY
Sbjct: 291 XLATTPNGDAYTFAEYESXFSNAGFSHSQLHSLPTTQQQVIVAY 334
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 99 KWLLHDSELSLAPMILVENNQWLLEPWHYLSQCVK-EGGIAFKKAHGCEIWDFASQSPQF 157
++L S + P++ + QW + W L + ++ E +AF++ FA + +
Sbjct: 101 RYLTTTSADYIGPIVEHQYLQW--DNWPRLGEILRSEKPLAFQQES-----RFAHDT-RA 152
Query: 158 NNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGGGTGGALAEIVKSYPHIKGINFD 217
+ FNDA ++ + +VS F +++ D+ GG G LA++++ +P + G +D
Sbjct: 153 RDAFNDAXVRLSQPXVD-VVSELG-VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWD 210
Query: 218 LPHVVATAPVCEGIFHVGG-------DMFDAIP----KADAVFMKWILHDWDDEACVKIL 266
LP A +GG ++ DA AD V + LH +D +++
Sbjct: 211 LPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVXLNDCLHYFDAREAREVI 270
Query: 267 KNCRQAIPDKSGKLVLVEIVVQED 290
+ + G L+++ +D
Sbjct: 271 GHA-AGLVKPGGALLILTXTXNDD 293
>pdb|2YPD|A Chain A, Crystal Structure Of The Jumonji Domain Of Human Jumonji
Domain Containing 1c Protein
pdb|2YPD|B Chain B, Crystal Structure Of The Jumonji Domain Of Human Jumonji
Domain Containing 1c Protein
Length = 392
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 125 WHYLSQCVKEGGIAF----KKAHGCEIWDFASQSPQFNNLFNDAMACTAKIVMKALVSHY 180
W +C K+G A K +W S S F + D + C I+ A V +
Sbjct: 24 WKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADLLNCKDSIISNANVKEF 83
Query: 181 KDGFDSIQSLADVGGGTGGALAEIVKSYP 209
DGF+ + G L +K +P
Sbjct: 84 WDGFEEVSKRQKNKSGETVVLK--LKDWP 110
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 188 QSLADVGGGTGGALAEIVKSYPHIKGINFDLPHVV-------ATAPVCEGIFHVGGDMFD 240
+ L D+GG TG + V+ ++ DLP + A E I G ++ D
Sbjct: 181 KRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLD 240
Query: 241 A---IPKA-DAVFMKWILHDWDDEACVKILKNCRQAIPDKSGKLVLVEIV 286
P DAV+M L + +E + IL Q+I K K+ ++E +
Sbjct: 241 RDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSI-GKDSKVYIMETL 289
>pdb|3NJ2|A Chain A, Crystal Structure Of Cce_0566 From The Cyanobacterium
Cyanothece 51142, A Protein Associated With Nitrogen
Fixation From The Duf269 Family
pdb|3NJ2|B Chain B, Crystal Structure Of Cce_0566 From The Cyanobacterium
Cyanothece 51142, A Protein Associated With Nitrogen
Fixation From The Duf269 Family
Length = 174
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 171 IVMKALVSHYKDGFDSIQSLADVGGGTGGALAEIVKSYPHI 211
+V ++L ++ GFD+++ L D G A E+V +P +
Sbjct: 131 VVSRSLRDAHRFGFDTLEKLNDQGTKLANAGIELVNKFPEV 171
>pdb|3VJZ|A Chain A, Crystal Structure Of The Dna Mimic Protein Dmp19
pdb|3VJZ|B Chain B, Crystal Structure Of The Dna Mimic Protein Dmp19
Length = 166
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 95 THISKWLLHDSELSLAPMILVENNQWLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQS 154
T +S +L H ++ + + ++Q L + YL V+EGG A G + F ++
Sbjct: 22 TLVSAYLEHTAQTGDESLSCLSDDQHTLTAFCYLDSQVEEGGFVQLIASGYGEYIF--RN 79
Query: 155 PQFNNLFNDAMACTAKIVMKALVSHYKDGFDSIQSLADVGGGTGGA-LAEIVKSYPHIK 212
P ++L + K++ KA + + G +I++LAD GGA + + K +P +
Sbjct: 80 PLADSLRRWKIKAVPKVLDKAKALYEQHG-KTIETLAD-----GGADIPSLRKQFPEFE 132
>pdb|1LML|A Chain A, Leishmanolysin
Length = 478
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 202 AEIVKSYPHIKGINFDLPHVVATAPVCEGIFHVGGDMFD 240
A IV + P+++G NFD+P + ++ V + G D +
Sbjct: 181 ARIVANVPNVRGKNFDVPVINSSTAVAKAREQYGCDTLE 219
>pdb|6CGT|A Chain A, Hoxa Complex Of Cyclodextrin Glycosyltransferase Mutant
Length = 684
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 12/109 (11%)
Query: 120 WLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQSP------QFNNLFNDAMACTAKIVM 173
W+ +P + + G+ HG DF +P F NL A A KIV+
Sbjct: 75 WISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQNLITTAHAKGIKIVI 134
Query: 174 KALVSHYKDGFDSIQSLADVG----GGT--GGALAEIVKSYPHIKGINF 216
+H ++ S A+ G GT GG + + H G +F
Sbjct: 135 DFAPNHTSPAMETDTSFAENGRLYDNGTLVGGYTNDTNGYFHHNGGSDF 183
>pdb|1CGT|A Chain A, Structure Of Cyclodextrin Glycosyltransferase Refined At
2.0 Angstroms Resolution
Length = 684
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 12/109 (11%)
Query: 120 WLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQSP------QFNNLFNDAMACTAKIVM 173
W+ +P + + G+ HG DF +P F NL A A KIV+
Sbjct: 75 WISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQNLITTAHAKGIKIVI 134
Query: 174 KALVSHYKDGFDSIQSLADVG----GGT--GGALAEIVKSYPHIKGINF 216
+H ++ S A+ G GT GG + + H G +F
Sbjct: 135 DFAPNHTSPAMETDTSFAENGRLYDNGTLVGGYTNDTNGYFHHNGGSDF 183
>pdb|1CGU|A Chain A, Catalytic Center Of Cyclodextrin Glycosyltransferase
Derived From X-Ray Structure Analysis Combined With
Site- Directed Mutagenesis
pdb|5CGT|A Chain A, Maltotriose Complex Of Preconditioned Cyclodextrin
Glycosyltransferase Mutant
pdb|7CGT|A Chain A, Rameb Complex Of Cyclodextrin Glycosyltransferase Mutant
Length = 684
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 12/109 (11%)
Query: 120 WLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQSP------QFNNLFNDAMACTAKIVM 173
W+ +P + + G+ HG DF +P F NL A A KIV+
Sbjct: 75 WISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQNLITTAHAKGIKIVI 134
Query: 174 KALVSHYKDGFDSIQSLADVG----GGT--GGALAEIVKSYPHIKGINF 216
+H ++ S A+ G GT GG + + H G +F
Sbjct: 135 DFAPNHTSPAMETDTSFAENGRLYDNGTLVGGYTNDTNGYFHHNGGSDF 183
>pdb|8CGT|A Chain A, Structure Of Cyclodextrin Glycosyltransferase Complexed
With A Thio-Maltohexaose
pdb|9CGT|A Chain A, Structure Of Cyclodextrin Glycosyltransferase Complexed
With A Thio-Maltopentaose
pdb|3CGT|A Chain A, Structure Of Cyclodextrin Glycosyltransferase Complexed
With Its Main Product Beta-Cyclodextrin
Length = 684
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 12/109 (11%)
Query: 120 WLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQSP------QFNNLFNDAMACTAKIVM 173
W+ +P + + G+ HG DF +P F NL A A KIV+
Sbjct: 75 WISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQNLITTAHAKGIKIVI 134
Query: 174 KALVSHYKDGFDSIQSLADVG----GGT--GGALAEIVKSYPHIKGINF 216
+H ++ S A+ G GT GG + + H G +F
Sbjct: 135 DFAPNHTSPAMETDTSFAENGRLYDNGTLVGGYTNDTNGYFHHNGGSDF 183
>pdb|1UKT|A Chain A, Crystal Structure Of Y100l Mutant Cyclodextrin
Glucanotransferase Compexed With An Acarbose
pdb|1UKT|B Chain B, Crystal Structure Of Y100l Mutant Cyclodextrin
Glucanotransferase Compexed With An Acarbose
Length = 686
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 12/109 (11%)
Query: 120 WLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQSP------QFNNLFNDAMACTAKIVM 173
W+ +P + + G+ HG DF +P F NL + A A K+++
Sbjct: 75 WISQPVENIYSVINYSGVNNTAYHGLWARDFKKTNPAYGTMQDFKNLIDTAHAHNIKVII 134
Query: 174 KALVSHYKDG------FDSIQSLADVGGGTGGALAEIVKSYPHIKGINF 216
+H F L D G GG + + H G +F
Sbjct: 135 DFAPNHTSPASSDDPSFAENGRLYDNGNLLGGYTNDTQNLFHHYGGTDF 183
>pdb|4CGT|A Chain A, Deletion Mutant Delta(145-150), F151d Of Cyclodextrin
Glycosyltransferase
Length = 678
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 120 WLLEPWHYLSQCVKEGGIAFKKAHGCEIWDFASQSP------QFNNLFNDAMACTAKIVM 173
W+ +P + + G+ HG DF +P F NL A A KIV+
Sbjct: 75 WISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQNLITTAHAKGIKIVI 134
Query: 174 KALVSHYKDGFDSIQSLADVGGGTGGALAEIVKSYPHIKGINF 216
+H L D G GG + + H G +F
Sbjct: 135 DFAPNHTSPADAENGRLYDNGTLVGGYTNDTNGYFHHNGGSDF 177
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,976,570
Number of Sequences: 62578
Number of extensions: 455751
Number of successful extensions: 1292
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1222
Number of HSP's gapped (non-prelim): 39
length of query: 350
length of database: 14,973,337
effective HSP length: 100
effective length of query: 250
effective length of database: 8,715,537
effective search space: 2178884250
effective search space used: 2178884250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)