Your job contains 1 sequence.
>018778
MQVKTFANHFVSSPNSRLKLLSQSLTSCSKTFLISTTLQWHSSLLPSRLCVFAPKDHQKR
FITTCLSSSQEFASENDISDTSVSLSAEKEEEEKAVEVKTEGLADQSIWNQIKEIMKFTG
PATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSL
TNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIR
GLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATM
ASQVIAAYMMIINLNQKGYNAFAISIPLPSELLAIFELAAPVFVMMMSKV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018778
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050140 - symbol:AT2G21340 species:3702 "Arabi... 1044 1.7e-105 1
TAIR|locus:2120267 - symbol:EDS5 "AT4G39030" species:3702... 939 2.3e-94 1
TAIR|locus:2057135 - symbol:AT2G38330 "AT2G38330" species... 204 7.8e-14 1
TAIR|locus:2077477 - symbol:FRD3 "FERRIC REDUCTASE DEFECT... 152 7.5e-13 2
TAIR|locus:2008236 - symbol:AT1G51340 species:3702 "Arabi... 123 3.6e-10 2
UNIPROTKB|P28303 - symbol:dinF "DinF MATE Transporter" sp... 159 9.2e-09 1
UNIPROTKB|Q8E8P4 - symbol:dinF "DNA damage-inducible mult... 151 7.3e-08 1
TIGR_CMR|SO_4617 - symbol:SO_4617 "DNA-damage-inducible p... 151 7.3e-08 1
UNIPROTKB|Q5LPD9 - symbol:dinF "DNA-damage-inducible prot... 148 1.5e-07 1
TIGR_CMR|SPO_2909 - symbol:SPO_2909 "DNA-damage-inducible... 148 1.5e-07 1
UNIPROTKB|Q0BYJ3 - symbol:HNE_2771 "Putative DNA-damage-i... 135 4.3e-06 1
TAIR|locus:2121783 - symbol:AT4G38380 species:3702 "Arabi... 99 1.5e-05 2
UNIPROTKB|Q9KVQ1 - symbol:VC_0090 "DNA-damage-inducible p... 125 6.0e-05 1
TIGR_CMR|VC_0090 - symbol:VC_0090 "DNA-damage-inducible p... 125 6.0e-05 1
TIGR_CMR|CHY_1592 - symbol:CHY_1592 "MATE efflux family p... 123 9.6e-05 1
UNIPROTKB|Q48DJ8 - symbol:dinF "DNA-damage-inducible prot... 122 0.00013 1
>TAIR|locus:2050140 [details] [associations]
symbol:AT2G21340 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006841
GO:GO:0009941 GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 HOGENOM:HOG000029977
EMBL:AY062577 EMBL:AY128797 EMBL:AY086052 IPI:IPI00522746
PIR:B84600 RefSeq:NP_565509.4 UniGene:At.27297
ProteinModelPortal:Q8W4G3 PaxDb:Q8W4G3 PRIDE:Q8W4G3
EnsemblPlants:AT2G21340.1 GeneID:816673 KEGG:ath:AT2G21340
GeneFarm:3161 TAIR:At2g21340 InParanoid:Q9SJU3 OMA:WAMGFLR
PhylomeDB:Q8W4G3 ProtClustDB:CLSN2927366 Genevestigator:Q8W4G3
Uniprot:Q8W4G3
Length = 559
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 212/332 (63%), Positives = 247/332 (74%)
Query: 32 FLISTTLQ-WHSSLLPSRL-CVFAPKDHQK--RFITTCLSSSQEFASENDISDTSVSLSX 87
F S TL+ W+ S R V PK K RF+ C S++QE + + + S+S
Sbjct: 23 FPSSLTLRSWNPSFPSFRSSAVSGPKSSLKLNRFLRNCASTNQELVVDGETGNGSISELQ 82
Query: 88 XXXXXXXXXXXXTEG---------LADQSIWNQIKEIMKFTGPATGLWICGPLMSLIDTA 138
E LA QSIW Q+KEI+ FTGPA GLW+CGPLMSLIDTA
Sbjct: 83 GDAANGSISPVEVEAEVEEVKVDDLATQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTA 142
Query: 139 VIGQGSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEVQHQISVLLFV 198
VIGQGSSLELAALGP TV+CD + Y FMFLS+ATSNLVATSL +DK+EVQHQIS+LLF+
Sbjct: 143 VIGQGSSLELAALGPATVICDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFI 202
Query: 199 GLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASL 258
GLACG +M++ T+ FG AL+AFTG KN I+PAANKYVQIRGLAWPAVL GWVAQSASL
Sbjct: 203 GLACGVTMMVLTRLFGSWALTAFTGVKNADIVPAANKYVQIRGLAWPAVLIGWVAQSASL 262
Query: 259 GMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAAYMMIINLNQKG 318
GMKDSWGPLKAL VASA+NG+GD+VLC FLGYGIAGAAWATM SQV+AAYMM+ LN+KG
Sbjct: 263 GMKDSWGPLKALAVASAINGVGDVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKG 322
Query: 319 YNAFAISIPLPSELLAIFELAAPVFVMMMSKV 350
Y+AF+ +P PSELL IF LAAPVF+ MMSKV
Sbjct: 323 YSAFSFCVPSPSELLTIFGLAAPVFITMMSKV 354
>TAIR|locus:2120267 [details] [associations]
symbol:EDS5 "AT4G39030" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA;ISS] [GO:0015297
"antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA;IMP]
[GO:0006952 "defense response" evidence=TAS] [GO:0009624 "response
to nematode" evidence=IEP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0031348
"negative regulation of defense response" evidence=RCA;IMP]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000096 "sulfur amino acid metabolic process" evidence=RCA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006520 "cellular
amino acid metabolic process" evidence=RCA] [GO:0006546 "glycine
catabolic process" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006636 "unsaturated fatty acid
biosynthetic process" evidence=RCA] [GO:0006733 "oxidoreduction
coenzyme metabolic process" evidence=RCA] [GO:0006766 "vitamin
metabolic process" evidence=RCA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=RCA] [GO:0009072 "aromatic amino
acid family metabolic process" evidence=RCA] [GO:0009106 "lipoate
metabolic process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic
process" evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019748 "secondary metabolic process" evidence=RCA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0005739 GO:GO:0009536
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0031348 GO:GO:0042742
GO:GO:0009624 GO:GO:0015238 GO:GO:0015297 eggNOG:COG0534
TIGRFAMs:TIGR00797 EMBL:AL035679 EMBL:AL161594 GO:GO:0009697
EMBL:AF416569 IPI:IPI00540268 RefSeq:NP_195614.2 UniGene:At.2846
UniGene:At.66625 ProteinModelPortal:Q945F0 STRING:Q945F0
TCDB:2.A.66.1.11 EnsemblPlants:AT4G39030.1 GeneID:830058
KEGG:ath:AT4G39030 TAIR:At4g39030 HOGENOM:HOG000029977
InParanoid:Q945F0 OMA:ELWKISA PhylomeDB:Q945F0
ProtClustDB:CLSN2915066 Genevestigator:Q945F0 GermOnline:AT4G39030
Uniprot:Q945F0
Length = 543
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 173/248 (69%), Positives = 209/248 (84%)
Query: 103 LADQSIWNQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMS 162
L QSIW Q+KEI+KFTGPA G+WICGPLMSLIDT VIGQGSS+ELAALGPGTVLCD+MS
Sbjct: 90 LVKQSIWEQMKEIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHMS 149
Query: 163 YIFMFLSIATSNLVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFT 222
Y+FMFLS+ATSN+VATSL +DK E QHQISVLLF+GL CG ML+ T+ FG A++AFT
Sbjct: 150 YVFMFLSVATSNMVATSLAKQDKKEAQHQISVLLFIGLVCGLMMLLLTRLFGPWAVTAFT 209
Query: 223 GSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDI 282
KN+ I+PAANKY+QIRGLAWP +L G VAQSASLGMK+SWGPLKAL A+ +NG+GD
Sbjct: 210 RGKNIEIVPAANKYIQIRGLAWPFILVGLVAQSASLGMKNSWGPLKALAAATIINGLGDT 269
Query: 283 VLCRFLGYGIAGAAWATMASQVIAAYMMIINLNQKGYNAFAISIPLPSELLAIFELAAPV 342
+LC FLG GIAGAAWAT ASQ+++AYMM+ +LN++GYNA++ +IP P EL I LAAPV
Sbjct: 270 ILCLFLGQGIAGAAWATTASQIVSAYMMMDSLNKEGYNAYSFAIPSPQELWKISALAAPV 329
Query: 343 FVMMMSKV 350
F+ + SK+
Sbjct: 330 FISIFSKI 337
>TAIR|locus:2057135 [details] [associations]
symbol:AT2G38330 "AT2G38330" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0031969 GO:GO:0015238
GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:AC004683
UniGene:At.37311 UniGene:At.74107 HOGENOM:HOG000253153
EMBL:BT004001 EMBL:BT005521 IPI:IPI00529504 PIR:T02512
RefSeq:NP_181367.2 ProteinModelPortal:Q84K71 IntAct:Q84K71
PaxDb:Q84K71 PRIDE:Q84K71 EnsemblPlants:AT2G38330.1 GeneID:818413
KEGG:ath:AT2G38330 TAIR:At2g38330 InParanoid:Q84K71 OMA:FAYDGVF
PhylomeDB:Q84K71 ProtClustDB:CLSN2918200 Genevestigator:Q84K71
Uniprot:Q84K71
Length = 521
Score = 204 (76.9 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 64/218 (29%), Positives = 112/218 (51%)
Query: 114 EIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFM--FLSIA 171
EIM PA P+ SL+DTA +G S ELAA+G + + +S +F L++
Sbjct: 79 EIMSIALPAALALAADPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVT 138
Query: 172 TSNLVAT-SLTNRDKNE-VQHQISVLLFVGLACGFSMLIFTKFFGM-QALSAFTGSK--- 225
TS + ++ +D N+ ++ VL V + L+ G+ +A++ GS
Sbjct: 139 TSFVAEEQAIAAKDDNDSIETSKKVLPSVSTS-----LVLAAGVGIAEAIALSLGSDFLM 193
Query: 226 NVHILP-------AANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNG 278
+V +P A +++++R P ++ AQ A G KD+ PL A+V + +N
Sbjct: 194 DVMAIPFDSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNA 253
Query: 279 IGDIVLCRFLGYGIAGAAWATMASQVIAAYMMIINLNQ 316
+ D +L LG+GI+GAA AT+ S+ + A++++ LN+
Sbjct: 254 VLDPILIFVLGFGISGAAAATVISEYLIAFILLWKLNE 291
>TAIR|locus:2077477 [details] [associations]
symbol:FRD3 "FERRIC REDUCTASE DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006879 "cellular iron ion homeostasis"
evidence=IMP] [GO:0015137 "citrate transmembrane transporter
activity" evidence=IDA] [GO:0071281 "cellular response to iron ion"
evidence=IEP] [GO:0071369 "cellular response to ethylene stimulus"
evidence=IEP] [GO:0071732 "cellular response to nitric oxide"
evidence=IEP] [GO:0006826 "iron ion transport" evidence=RCA]
[GO:0010106 "cellular response to iron ion starvation"
evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0071281 GO:GO:0006879 GO:GO:0015238 GO:GO:0071732
GO:GO:0015297 EMBL:AC013483 eggNOG:COG0534 TIGRFAMs:TIGR00797
GO:GO:0005216 GO:GO:0071369 EMBL:AC074395 EMBL:AF448231
EMBL:AY056439 EMBL:AY057517 EMBL:AY133652 EMBL:BT006370
IPI:IPI00531718 RefSeq:NP_001154595.1 RefSeq:NP_187461.1
UniGene:At.17333 ProteinModelPortal:Q9SFB0 IntAct:Q9SFB0
STRING:Q9SFB0 PRIDE:Q9SFB0 EnsemblPlants:AT3G08040.1
EnsemblPlants:AT3G08040.2 GeneID:819995 KEGG:ath:AT3G08040
TAIR:At3g08040 HOGENOM:HOG000253153 InParanoid:Q9SFB0 OMA:ARSARHY
PhylomeDB:Q9SFB0 ProtClustDB:CLSN2915580 Genevestigator:Q9SFB0
GO:GO:0015137 Uniprot:Q9SFB0
Length = 526
Score = 152 (58.6 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 45/138 (32%), Positives = 64/138 (46%)
Query: 181 TNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSK-NVHILPAANKYVQI 239
+N+ + S + +GL G IF F + L G K N +L A+KY+ I
Sbjct: 160 SNKKEKRTIRTASTAMILGLILGLVQAIFL-IFSSKLLLGVMGVKPNSPMLSPAHKYLSI 218
Query: 240 RGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWAT 299
R L PA+L Q G KD+ PL A VVA +N + D + L GI GAA A
Sbjct: 219 RALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAH 278
Query: 300 MASQVIAAYMMIINLNQK 317
+ SQ ++ + L +K
Sbjct: 279 VISQYFMTLILFVFLAKK 296
Score = 89 (36.4 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 113 KEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMF--LSI 170
+EI+ PA P+ SLIDTA +G+ +++LAA+G + + S I +F +S+
Sbjct: 35 REILGIAFPAALALAADPIASLIDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSL 94
Query: 171 ATSNLVATSLTNRDKNE 187
TS + + K E
Sbjct: 95 TTSFVAEEDTMEKMKEE 111
>TAIR|locus:2008236 [details] [associations]
symbol:AT1G51340 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 GO:GO:0005216 EMBL:AC006085
OMA:GAEMRNS HOGENOM:HOG000253153 EMBL:BX818238 IPI:IPI00518906
IPI:IPI00524609 PIR:D96551 RefSeq:NP_564588.2 RefSeq:NP_974000.1
UniGene:At.26628 ProteinModelPortal:Q9SYD6 PaxDb:Q9SYD6
PRIDE:Q9SYD6 EnsemblPlants:AT1G51340.2 GeneID:841557
KEGG:ath:AT1G51340 TAIR:At1g51340 InParanoid:Q9SYD6
PhylomeDB:Q9SYD6 ProtClustDB:CLSN2918502 Genevestigator:Q9SYD6
Uniprot:Q9SYD6
Length = 515
Score = 123 (48.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 39/144 (27%), Positives = 65/144 (45%)
Query: 172 TSNLVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVH-IL 230
+S++ + S K + S L+ +G G +F + L +F G K+ ++
Sbjct: 148 SSSIFSISKPPAKKRNIPSASSALI-IGGVLGLFQAVFL-ISAAKPLLSFMGVKHDSPMM 205
Query: 231 PAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGY 290
+ +Y+ +R L PAVL AQ G KD+ PL A V+ N I D +
Sbjct: 206 RPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVFRL 265
Query: 291 GIAGAAWATMASQVIAAYMMIINL 314
G+ GAA A + SQ + +++ L
Sbjct: 266 GVTGAATAHVISQYLMCGILLWKL 289
Score = 95 (38.5 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 114 EIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMF--LSIA 171
EI + PA P+ SL+DTA IGQ +ELAA+G L + +S I +F +SI
Sbjct: 35 EIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSIT 94
Query: 172 TS 173
TS
Sbjct: 95 TS 96
>UNIPROTKB|P28303 [details] [associations]
symbol:dinF "DinF MATE Transporter" species:83333
"Escherichia coli K-12" [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0015238
EMBL:U00006 GO:GO:0015297 eggNOG:COG0534 KO:K03327
TIGRFAMs:TIGR00797 EMBL:L02362 PIR:C65212 RefSeq:NP_418468.3
RefSeq:YP_492187.1 ProteinModelPortal:P28303 TCDB:2.A.66.1.4
EnsemblBacteria:EBESCT00000004175 EnsemblBacteria:EBESCT00000014884
GeneID:12932728 GeneID:948554 KEGG:ecj:Y75_p3931 KEGG:eco:b4044
PATRIC:32123625 EchoBASE:EB1454 EcoGene:EG11491
HOGENOM:HOG000253154 OMA:GAEMRNS ProtClustDB:PRK10367
BioCyc:EcoCyc:DINF-MONOMER BioCyc:ECOL316407:JW4004-MONOMER
Genevestigator:P28303 Uniprot:P28303
Length = 459
Score = 159 (61.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 55/185 (29%), Positives = 91/185 (49%)
Query: 130 PLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEV 188
PL+ L+DTAVIG S + L + G + + +FL ++T+ L A + ++ +
Sbjct: 44 PLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQAL 103
Query: 189 QHQISVLLFVGLACGFSM-LIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAV 247
+ L + L G + L+ T + AL GS+ V L A ++++IR L+ PA
Sbjct: 104 ARTLVQPLLLALGAGALIALLRTPIIDL-ALHIVGGSEAV--LEQARRFLEIRWLSAPAS 160
Query: 248 LTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAA 307
L V LG++ + P+ LVV + +N + D+ L L + GAA AT VIA
Sbjct: 161 LANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALAT----VIAE 216
Query: 308 YMMII 312
Y ++
Sbjct: 217 YATLL 221
>UNIPROTKB|Q8E8P4 [details] [associations]
symbol:dinF "DNA damage-inducible multidrug and toxin
efflux protein DinF" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GO:GO:0015238 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0015297 TIGRFAMs:TIGR00797
HOGENOM:HOG000253154 RefSeq:NP_720133.1 GeneID:1172200
KEGG:son:SO_4617 PATRIC:23528897 OMA:FYNILAN ProtClustDB:CLSK907734
Uniprot:Q8E8P4
Length = 455
Score = 151 (58.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 50/188 (26%), Positives = 91/188 (48%)
Query: 130 PLMSLIDTAVIGQGS-SLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEV 188
PL+ L+DTAVIG S + L + G+ + + ++ FL +AT+ LVA + N++
Sbjct: 36 PLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRMATTGLVAQAY---GANDI 92
Query: 189 QHQISVLLFVG-LACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAV 247
Q+ +L+ LA G + + + +L+ +V + +Y QIR + P
Sbjct: 93 NAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEASVEVERYCREYFQIRIWSTPFA 152
Query: 248 LTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQV--- 304
L V LG + + L+ A+ N I D++ G+G+ GAA A++ + +
Sbjct: 153 LLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGVKGAALASVFADITAF 212
Query: 305 -IAAYMMI 311
+A YM++
Sbjct: 213 SVALYMVL 220
>TIGR_CMR|SO_4617 [details] [associations]
symbol:SO_4617 "DNA-damage-inducible protein F"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0015238 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0015297 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:NP_720133.1 GeneID:1172200 KEGG:son:SO_4617 PATRIC:23528897
OMA:FYNILAN ProtClustDB:CLSK907734 Uniprot:Q8E8P4
Length = 455
Score = 151 (58.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 50/188 (26%), Positives = 91/188 (48%)
Query: 130 PLMSLIDTAVIGQGS-SLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEV 188
PL+ L+DTAVIG S + L + G+ + + ++ FL +AT+ LVA + N++
Sbjct: 36 PLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRMATTGLVAQAY---GANDI 92
Query: 189 QHQISVLLFVG-LACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAV 247
Q+ +L+ LA G + + + +L+ +V + +Y QIR + P
Sbjct: 93 NAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEASVEVERYCREYFQIRIWSTPFA 152
Query: 248 LTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQV--- 304
L V LG + + L+ A+ N I D++ G+G+ GAA A++ + +
Sbjct: 153 LLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVLGFGWGVKGAALASVFADITAF 212
Query: 305 -IAAYMMI 311
+A YM++
Sbjct: 213 SVALYMVL 220
>UNIPROTKB|Q5LPD9 [details] [associations]
symbol:dinF "DNA-damage-inducible protein F" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0015238 GO:GO:0015297
KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:YP_168117.1 GeneID:3193509 KEGG:sil:SPO2909 PATRIC:23379243
OMA:PMILANI ProtClustDB:CLSK933990 Uniprot:Q5LPD9
Length = 441
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/198 (25%), Positives = 97/198 (48%)
Query: 113 KEIMKFTGPATGLWICGPLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFLSIA 171
+ ++K P + P++ +DTAV+GQ + +AA+G G ++ + +IF FL +
Sbjct: 10 QRVLKIAVPIMLANMTVPILGAVDTAVVGQIPQAAPIAAVGVGAIILSAIYWIFGFLRMG 69
Query: 172 TSNLVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILP 231
T+ L A + + EV ++ L +G+A G ++++ AL+ S V L
Sbjct: 70 TAGLTAQAHGAGHEGEVAALLTRSLMIGVAGGVALILLQLPIYWGALAVSPASAEVETL- 128
Query: 232 AANKYVQIRGLAWPAVL-----TGWVAQSASLGMKDSWGPLKALVVASAVN-GIGDIVLC 285
A Y+ IR + PA + TGW+ + ++ + L + + +N G+ D+
Sbjct: 129 -ARGYMSIRIWSAPAAIAIYGITGWL-----IALERTRAVLVLQLWMNGLNMGL-DLWFV 181
Query: 286 RFLGYGIAGAAWATMASQ 303
LG+G+ G A+AT ++
Sbjct: 182 LGLGWGVNGVAFATFLAE 199
>TIGR_CMR|SPO_2909 [details] [associations]
symbol:SPO_2909 "DNA-damage-inducible protein F"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0015238
GO:GO:0015297 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:YP_168117.1 GeneID:3193509 KEGG:sil:SPO2909 PATRIC:23379243
OMA:PMILANI ProtClustDB:CLSK933990 Uniprot:Q5LPD9
Length = 441
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/198 (25%), Positives = 97/198 (48%)
Query: 113 KEIMKFTGPATGLWICGPLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFLSIA 171
+ ++K P + P++ +DTAV+GQ + +AA+G G ++ + +IF FL +
Sbjct: 10 QRVLKIAVPIMLANMTVPILGAVDTAVVGQIPQAAPIAAVGVGAIILSAIYWIFGFLRMG 69
Query: 172 TSNLVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILP 231
T+ L A + + EV ++ L +G+A G ++++ AL+ S V L
Sbjct: 70 TAGLTAQAHGAGHEGEVAALLTRSLMIGVAGGVALILLQLPIYWGALAVSPASAEVETL- 128
Query: 232 AANKYVQIRGLAWPAVL-----TGWVAQSASLGMKDSWGPLKALVVASAVN-GIGDIVLC 285
A Y+ IR + PA + TGW+ + ++ + L + + +N G+ D+
Sbjct: 129 -ARGYMSIRIWSAPAAIAIYGITGWL-----IALERTRAVLVLQLWMNGLNMGL-DLWFV 181
Query: 286 RFLGYGIAGAAWATMASQ 303
LG+G+ G A+AT ++
Sbjct: 182 LGLGWGVNGVAFATFLAE 199
>UNIPROTKB|Q0BYJ3 [details] [associations]
symbol:HNE_2771 "Putative DNA-damage-inducible protein F"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0006974 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:CP000158
GenomeReviews:CP000158_GR HOGENOM:HOG000253154 RefSeq:YP_761450.1
STRING:Q0BYJ3 GeneID:4290229 KEGG:hne:HNE_2771 PATRIC:32218415
OMA:RLNTDIF ProtClustDB:CLSK777581
BioCyc:HNEP228405:GI69-2778-MONOMER Uniprot:Q0BYJ3
Length = 437
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 52/181 (28%), Positives = 82/181 (45%)
Query: 134 LIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEVQHQI 192
++DTAV+G+ G++ ELAA+G V+ + + + F FL +AT+ L A + D E +
Sbjct: 30 IVDTAVMGRYGTAAELAAVGLAAVVFNFLYWGFGFLRMATTGLTAQADGAGDTGETNAIL 89
Query: 193 SVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWV 252
L +G G +LI +L+ F V AA + +I G PA L G+
Sbjct: 90 KRALLLGGGLGLLILITFPLVSHFSLALFQADAPVEAEAAAYFWGRIWGA--PAALMGFA 147
Query: 253 AQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWAT-MASQVIAAYMMI 311
+G + L + +AVNG D + +G AG T MA A ++
Sbjct: 148 ITGWLIGTGRTRALLAVQIGMNAVNGGLDFLFVAVFDWGPAGIGVGTAMAEWAALALGLV 207
Query: 312 I 312
I
Sbjct: 208 I 208
>TAIR|locus:2121783 [details] [associations]
symbol:AT4G38380 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
TIGRFAMs:TIGR00797 EMBL:AL161593 EMBL:AL035539 IPI:IPI00528910
PIR:T05666 RefSeq:NP_195551.5 UniGene:At.65831
ProteinModelPortal:Q9SVE7 PRIDE:Q9SVE7 EnsemblPlants:AT4G38380.1
GeneID:829995 KEGG:ath:AT4G38380 TAIR:At4g38380 OMA:EMFIPAR
Genevestigator:Q9SVE7 Uniprot:Q9SVE7
Length = 560
Score = 99 (39.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/127 (25%), Positives = 63/127 (49%)
Query: 192 ISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTGW 251
I + +F LA + F + G+Q++S +PA +++ +R L PA +
Sbjct: 214 IGIGIFEALALSLASGPFLRLMGIQSMSEM-------FIPA-RQFLVLRALGAPAYVVSL 265
Query: 252 VAQSASLGMKDSWGPLKALVVASAVNG-IGDIVLCRFLGYGIAGAAWATMASQVIAAYMM 310
Q G KD+ P+ L + + + + + + +F G+AGAA +++ SQ A +M
Sbjct: 266 ALQGIFRGFKDTKTPVYCLGIGNFLAVFLFPLFIYKFR-MGVAGAAISSVISQYTVAILM 324
Query: 311 IINLNQK 317
+I LN++
Sbjct: 325 LILLNKR 331
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 113 KEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMF--LSI 170
+E++ + PA PL L++TA IG+ S+EL + G + + +S +F LS+
Sbjct: 107 RELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSV 166
Query: 171 ATS 173
ATS
Sbjct: 167 ATS 169
>UNIPROTKB|Q9KVQ1 [details] [associations]
symbol:VC_0090 "DNA-damage-inducible protein F"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0015238 GO:GO:0015297 KO:K03327 TIGRFAMs:TIGR00797 PIR:G82364
RefSeq:NP_229749.1 DNASU:2615829 GeneID:2615829 KEGG:vch:VC0090
PATRIC:20079236 OMA:ATKGSEM ProtClustDB:CLSK873856 Uniprot:Q9KVQ1
Length = 454
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 49/202 (24%), Positives = 96/202 (47%)
Query: 110 NQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFL 168
N ++++ P I PL+ L+D AVIG + L + G+ + ++ FL
Sbjct: 15 NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFL 74
Query: 169 SIATSNLVATSLTNRDKNEVQHQI--SVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKN 226
++T+ L A + ++ ++ + ++ +GLA F L+F + + + F+ + +
Sbjct: 75 RMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALF--LLFHRPVA-ELIFHFSDASS 131
Query: 227 VHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCR 286
+ A Y IR + PA L +V LG +++ P+ +++ + N + D++L
Sbjct: 132 -EVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVL 190
Query: 287 FLGYGIAGAAWATMASQVIAAY 308
LG + GAA A+ VIA Y
Sbjct: 191 GLGLKVEGAAIAS----VIADY 208
>TIGR_CMR|VC_0090 [details] [associations]
symbol:VC_0090 "DNA-damage-inducible protein F" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0015238 GO:GO:0015297
KO:K03327 TIGRFAMs:TIGR00797 PIR:G82364 RefSeq:NP_229749.1
DNASU:2615829 GeneID:2615829 KEGG:vch:VC0090 PATRIC:20079236
OMA:ATKGSEM ProtClustDB:CLSK873856 Uniprot:Q9KVQ1
Length = 454
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 49/202 (24%), Positives = 96/202 (47%)
Query: 110 NQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFL 168
N ++++ P I PL+ L+D AVIG + L + G+ + ++ FL
Sbjct: 15 NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFL 74
Query: 169 SIATSNLVATSLTNRDKNEVQHQI--SVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKN 226
++T+ L A + ++ ++ + ++ +GLA F L+F + + + F+ + +
Sbjct: 75 RMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALF--LLFHRPVA-ELIFHFSDASS 131
Query: 227 VHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCR 286
+ A Y IR + PA L +V LG +++ P+ +++ + N + D++L
Sbjct: 132 -EVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVL 190
Query: 287 FLGYGIAGAAWATMASQVIAAY 308
LG + GAA A+ VIA Y
Sbjct: 191 GLGLKVEGAAIAS----VIADY 208
>TIGR_CMR|CHY_1592 [details] [associations]
symbol:CHY_1592 "MATE efflux family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0015238
GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 RefSeq:YP_360420.1
STRING:Q3ABR4 GeneID:3728224 KEGG:chy:CHY_1592 PATRIC:21276309
HOGENOM:HOG000056140 BioCyc:CHYD246194:GJCN-1591-MONOMER
Uniprot:Q3ABR4
Length = 442
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 57/209 (27%), Positives = 90/209 (43%)
Query: 114 EIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMFLSIATS 173
EI+K PA I ++ ++DTA++G+ + +A + G + S F+F +I T
Sbjct: 4 EIIKVALPAVLEMILHMVVGIVDTAMVGRLGATAVAGVSLGAQII--FSTFFVFAAIGTG 61
Query: 174 N--LVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILP 231
L A +L + K EV+ S L + GF +L F + L A KNV ++
Sbjct: 62 GGALAAQALGAKKKEEVKKFFSYSLLLAFFAGF-LLFFLPYIVEIILPALKIDKNVALVT 120
Query: 232 AANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRF--LG 289
+ Y++ G L +V + + PL VV + +N D VL F LG
Sbjct: 121 IS--YLKTIGKFAVFALLVFVGNGLLRAIGQTRVPLYTAVVINCLNIFLDYVLI-FGKLG 177
Query: 290 YGIAGAAWATMASQVIAAYMMIINLNQKG 318
+ G A +AS + II L G
Sbjct: 178 FPKLGPGGAALASGISLTLGSIIALGYIG 206
>UNIPROTKB|Q48DJ8 [details] [associations]
symbol:dinF "DNA-damage-inducible protein F" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006974 "response
to DNA damage stimulus" evidence=ISS] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GO:GO:0006974 GO:GO:0015238
GO:GO:0015297 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
OMA:WAMGFLR RefSeq:YP_276543.1 STRING:Q48DJ8 GeneID:3557074
KEGG:psp:PSPPH_4427 PATRIC:19978345 ProtClustDB:CLSK868921
Uniprot:Q48DJ8
Length = 446
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 42/177 (23%), Positives = 86/177 (48%)
Query: 130 PLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEV 188
PL++L+D+AVIG + + ++ G+ L +++ FL + T+ A + D +
Sbjct: 32 PLVALVDSAVIGHLPHAHQSGSVAVGSTLYTFLAWAMGFLRMGTTGFAAQAAGRNDSAAL 91
Query: 189 QHQI--SVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPA 246
+ + +LL +GLA ++ F AL+ S ++ + Y ++ GL PA
Sbjct: 92 RRILLQGLLLAIGLALLLGVIALP--FSHLALAMMQPSADLQQMTLDFFYTRLFGL--PA 147
Query: 247 VLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQ 303
L + LG +++ PL L++ + VN ++ L +G+ G+A A++ ++
Sbjct: 148 ALASYALVGWFLGAQNARAPLAILLITNLVNIALNLWFVIGLDWGVVGSARASVLAE 204
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.133 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 337 0.00093 116 3 11 22 0.47 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 619 (66 KB)
Total size of DFA: 218 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.03u 0.11s 26.14t Elapsed: 00:00:01
Total cpu time: 26.03u 0.11s 26.14t Elapsed: 00:00:01
Start: Fri May 10 03:26:03 2013 End: Fri May 10 03:26:04 2013