BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018778
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4G3|MATE4_ARATH MATE efflux family protein 4, chloroplastic OS=Arabidopsis thaliana
GN=DTX46 PE=2 SV=1
Length = 559
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/312 (66%), Positives = 244/312 (78%), Gaps = 13/312 (4%)
Query: 51 VFAPKDHQK--RFITTCLSSSQEFASENDISDTSVSLSAEKEEEEKAVE----------V 98
V PK K RF+ C S++QE + + + S+S + + ++ V
Sbjct: 44 VSGPKSSLKLNRFLRNCASTNQELVVDGETGNGSIS-ELQGDAANGSISPVEVEAEVEEV 102
Query: 99 KTEGLADQSIWNQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLC 158
K + LA QSIW Q+KEI+ FTGPA GLW+CGPLMSLIDTAVIGQGSSLELAALGP TV+C
Sbjct: 103 KVDDLATQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVIC 162
Query: 159 DNMSYIFMFLSIATSNLVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQAL 218
D + Y FMFLS+ATSNLVATSL +DK+EVQHQIS+LLF+GLACG +M++ T+ FG AL
Sbjct: 163 DYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWAL 222
Query: 219 SAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNG 278
+AFTG KN I+PAANKYVQIRGLAWPAVL GWVAQSASLGMKDSWGPLKAL VASA+NG
Sbjct: 223 TAFTGVKNADIVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAING 282
Query: 279 IGDIVLCRFLGYGIAGAAWATMASQVIAAYMMIINLNQKGYNAFAISIPLPSELLAIFEL 338
+GD+VLC FLGYGIAGAAWATM SQV+AAYMM+ LN+KGY+AF+ +P PSELL IF L
Sbjct: 283 VGDVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGL 342
Query: 339 AAPVFVMMMSKV 350
AAPVF+ MMSKV
Sbjct: 343 AAPVFITMMSKV 354
>sp|Q945F0|EDS5_ARATH Enhanced disease susceptibility 5 OS=Arabidopsis thaliana GN=EDS5
PE=2 SV=1
Length = 543
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/248 (69%), Positives = 209/248 (84%)
Query: 103 LADQSIWNQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMS 162
L QSIW Q+KEI+KFTGPA G+WICGPLMSLIDT VIGQGSS+ELAALGPGTVLCD+MS
Sbjct: 90 LVKQSIWEQMKEIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHMS 149
Query: 163 YIFMFLSIATSNLVATSLTNRDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFT 222
Y+FMFLS+ATSN+VATSL +DK E QHQISVLLF+GL CG ML+ T+ FG A++AFT
Sbjct: 150 YVFMFLSVATSNMVATSLAKQDKKEAQHQISVLLFIGLVCGLMMLLLTRLFGPWAVTAFT 209
Query: 223 GSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDI 282
KN+ I+PAANKY+QIRGLAWP +L G VAQSASLGMK+SWGPLKAL A+ +NG+GD
Sbjct: 210 RGKNIEIVPAANKYIQIRGLAWPFILVGLVAQSASLGMKNSWGPLKALAAATIINGLGDT 269
Query: 283 VLCRFLGYGIAGAAWATMASQVIAAYMMIINLNQKGYNAFAISIPLPSELLAIFELAAPV 342
+LC FLG GIAGAAWAT ASQ+++AYMM+ +LN++GYNA++ +IP P EL I LAAPV
Sbjct: 270 ILCLFLGQGIAGAAWATTASQIVSAYMMMDSLNKEGYNAYSFAIPSPQELWKISALAAPV 329
Query: 343 FVMMMSKV 350
F+ + SK+
Sbjct: 330 FISIFSKI 337
>sp|Q84K71|MATE2_ARATH MATE efflux family protein 2, chloroplastic OS=Arabidopsis thaliana
GN=DTX44 PE=2 SV=1
Length = 521
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 25/287 (8%)
Query: 52 FAPKDHQKRFITTCLSSSQEFASENDISDTSVSLSAEKEEEEKAVEVKT-------EGLA 104
F+P RF S + ++ D S ++S + EK T +
Sbjct: 10 FSPHRSPSRFGNPNSSIRRTIVCKSSPRDESPAVSTSSQRPEKQQNPLTSQNKPDHDHKP 69
Query: 105 DQSIWNQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYI 164
D I EIM PA P+ SL+DTA +G S ELAA+G + + +S +
Sbjct: 70 DPGIGKIGMEIMSIALPAALALAADPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKL 129
Query: 165 F--MFLSIATSNLVAT-SLTNRDKNE-------VQHQISVLLF----VGLACGFSMLIFT 210
F L++ TS + ++ +D N+ V +S L VG+A ++ + +
Sbjct: 130 FNVPLLNVTTSFVAEEQAIAAKDDNDSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGS 189
Query: 211 KFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKAL 270
F + + A + I A +++++R P ++ AQ A G KD+ PL A+
Sbjct: 190 DF--LMDVMAIPFDSPMRI--PAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAV 245
Query: 271 VVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAAYMMIINLNQK 317
V + +N + D +L LG+GI+GAA AT+ S+ + A++++ LN+
Sbjct: 246 VAGNVLNAVLDPILIFVLGFGISGAAAATVISEYLIAFILLWKLNEN 292
>sp|Q9SFB0|FRD3_ARATH MATE efflux family protein FRD3 OS=Arabidopsis thaliana GN=FRD3
PE=1 SV=1
Length = 526
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 96/242 (39%), Gaps = 57/242 (23%)
Query: 133 SLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMF--LSIATS----------------- 173
SLIDTA +G+ +++LAA+G + + S I +F +S+ TS
Sbjct: 55 SLIDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANK 114
Query: 174 -NLV--------------ATSLTNRDKNEVQH-----------------------QISVL 195
NLV +S T+ D N+ Q S
Sbjct: 115 ANLVHAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTA 174
Query: 196 LFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWVAQS 255
+ +GL G IF F L N +L A+KY+ IR L PA+L Q
Sbjct: 175 MILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQG 234
Query: 256 ASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAAYMMIINLN 315
G KD+ PL A VVA +N + D + L GI GAA A + SQ ++ + L
Sbjct: 235 IFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLA 294
Query: 316 QK 317
+K
Sbjct: 295 KK 296
>sp|Q9SVE7|MATE3_ARATH MATE efflux family protein 3, chloroplastic OS=Arabidopsis thaliana
GN=DTX45 PE=2 SV=2
Length = 560
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 52/241 (21%)
Query: 113 KEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIF--MFLSI 170
+E++ + PA PL L++TA IG+ S+EL + G + + +S +F LS+
Sbjct: 107 RELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSV 166
Query: 171 ATS-------NLVATSLTNRD-KNEVQHQ------------------ISVLLFVGLACGF 204
ATS + A L + D ++++ Q I + +F LA
Sbjct: 167 ATSFVAEDIAKIAAQDLASEDSQSDIPSQGLPERKQLSSVSTALVLAIGIGIFEALALSL 226
Query: 205 SMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSW 264
+ F + G+Q++S + A +++ +R L PA + Q G KD+
Sbjct: 227 ASGPFLRLMGIQSMS--------EMFIPARQFLVLRALGAPAYVVSLALQGIFRGFKDTK 278
Query: 265 GPLKALVVASAVNGIGDIVLCRFL--------GYGIAGAAWATMASQVIAAYMMIINLNQ 316
P+ L GIG+ L FL G+AGAA +++ SQ A +M+I LN+
Sbjct: 279 TPVYCL-------GIGNF-LAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILMLILLNK 330
Query: 317 K 317
+
Sbjct: 331 R 331
>sp|Q9SYD6|MATE1_ARATH MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE PE=2
SV=2
Length = 515
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 93/236 (39%), Gaps = 60/236 (25%)
Query: 130 PLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMF--LSIATSNLVATSL------T 181
P+ SL+DTA IGQ +ELAA+G L + +S I +F +SI TS + T
Sbjct: 51 PIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDACSSQQDT 110
Query: 182 NRDKNEV------------------QHQISV----------------------------L 195
RD E +H+ S+
Sbjct: 111 VRDHKECIEIGINNPTEETIELIPEKHKDSLSDEFKTSSSIFSISKPPAKKRNIPSASSA 170
Query: 196 LFVGLACGFSMLIFTKFFGMQALSAFTGSK-NVHILPAANKYVQIRGLAWPAVLTGWVAQ 254
L +G G +F + L +F G K + ++ + +Y+ +R L PAVL AQ
Sbjct: 171 LIIGGVLGLFQAVFL-ISAAKPLLSFMGVKHDSPMMRPSQRYLSLRSLGAPAVLLSLAAQ 229
Query: 255 SASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAAYMM 310
G KD+ PL A V+ N I D + G+ GAA A VI+ Y+M
Sbjct: 230 GVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVFRLGVTGAATA----HVISQYLM 281
>sp|A7KAU3|S47A2_RABIT Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus
GN=SLC47A2 PE=1 SV=1
Length = 601
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 20/83 (24%)
Query: 235 KYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAG 294
KY+Q +G+ WP VL+G VV + VNG+ + L L G+ G
Sbjct: 201 KYLQNQGIVWPQVLSG--------------------VVGNCVNGVANYALVSVLNLGVRG 240
Query: 295 AAWATMASQVIAAYMMIINLNQK 317
+A+A SQ + A + +++ K
Sbjct: 241 SAYANTISQFVQAAFLFLHIVLK 263
>sp|Q6EI05|GAIPB_CUCMA DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1
Length = 587
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 185 KNEVQHQISVLLFVGLACGFSMLIFTKFFGMQA-LSAFTGSKNVHILPAANKYVQIRGLA 243
+N + H +S +L + L F F QA L AF G K VH++ + +G+
Sbjct: 276 ENPLDHSMSDMLQLHFYESSPYLKFAHFTANQAILEAFEGKKRVHVI----DFSMNQGMQ 331
Query: 244 WPAVL 248
WPA+L
Sbjct: 332 WPALL 336
>sp|Q5R7E4|S47A2_PONAB Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2
PE=2 SV=1
Length = 581
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 20/69 (28%)
Query: 235 KYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAG 294
KY+Q + + WP VL+G VV + VNG+ + L L G+ G
Sbjct: 172 KYLQNQKITWPQVLSG--------------------VVGNCVNGVANYALVSVLNLGVRG 211
Query: 295 AAWATMASQ 303
+A+A + SQ
Sbjct: 212 SAYANIISQ 220
>sp|Q9SLH3|RGA_ARATH DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1
Length = 587
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 185 KNEVQHQISVLLFVGLACGFSMLIFTKFFGMQA-LSAFTGSKNVHILPAANKYVQIRGLA 243
+N++ H +S L + L F F QA L AF G K VH++ + +GL
Sbjct: 280 QNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVI----DFSMNQGLQ 335
Query: 244 WPAVL 248
WPA++
Sbjct: 336 WPALM 340
>sp|Q9CD72|UVRD1_MYCLE ATP-dependent DNA helicase UvrD1 OS=Mycobacterium leprae (strain
TN) GN=uvrD PE=3 SV=1
Length = 778
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 138 AVIGQGSSLEL---AALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEVQHQISV 194
AV+ +GS L + A G TVL ++Y+ S+ S ++A + TN+ E++ +++
Sbjct: 28 AVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAITFTNKAAAEMRERVAR 87
Query: 195 LLFVGLACGFSMLIFT 210
L VG G SM + T
Sbjct: 88 L--VGDHTGPSMWVST 101
>sp|P28303|DINF_ECOLI DNA-damage-inducible protein F OS=Escherichia coli (strain K12)
GN=dinF PE=2 SV=1
Length = 459
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 127 ICGPLMSLIDTAVIGQ-GSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDK 185
I PL+ L+DTAVIG S + L + G + + +FL ++T+ L A + ++
Sbjct: 41 ITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNP 100
Query: 186 NEVQHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWP 245
+ + L + L G + + AL GS+ V L A ++++IR L+ P
Sbjct: 101 QALARTLVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAV--LEQARRFLEIRWLSAP 158
Query: 246 AVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVI 305
A L V LG++ + P+ LVV + +N + D+ L L + GAA AT VI
Sbjct: 159 ASLANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALAT----VI 214
Query: 306 AAY 308
A Y
Sbjct: 215 AEY 217
>sp|A1L1P9|S47A1_DANRE Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1
PE=2 SV=1
Length = 590
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 57/266 (21%)
Query: 110 NQIKEIMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELA--ALGPGTVLCDNMSYIFMF 167
+I E++K GP + L+S + T G ELA AL + +S I
Sbjct: 51 TEIVELLKLAGPVFISQLMIFLISFVSTVFCGHLGKTELAGVALAIAVINVTGIS-IGSG 109
Query: 168 LSIATSNLVATSLTNRDKNEV----QHQISVLLFVGLACGFSMLIFTKFFGMQALSAFTG 223
L+ A L++ + + + V Q I +LL C +++LI T+ L A
Sbjct: 110 LASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPC-WALLINTE----PILLAVRQ 164
Query: 224 SKNVH------------ILPAA------NKYVQIRGLAWPAVLTGWVAQSASLGMKDSWG 265
S NV LPAA +Y+Q +G+ WP V+TG
Sbjct: 165 SPNVASLSQLYVKIFMPALPAAFMYQLQGRYLQNQGIIWPQVITG--------------- 209
Query: 266 PLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAAYMMII-----NLNQKGYN 320
+ +N + + V L G+AG+A A SQ A + + NL++ ++
Sbjct: 210 -----AAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWD 264
Query: 321 AFAISIPLPSELLAIFELAAPVFVMM 346
+ S E A LA P +M+
Sbjct: 265 GW--SRDCLQEWGAFIRLALPSMLML 288
>sp|A4IIS8|S47A1_XENTR Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis
GN=slc47a1 PE=2 SV=1
Length = 574
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 26/91 (28%)
Query: 230 LPAA------NKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIV 283
LPAA KY+Q +G+ +P VLTG+ +A+ N + + +
Sbjct: 179 LPAAFLYQLLAKYLQNQGIIYPQVLTGF--------------------IANIFNALFNYI 218
Query: 284 LCRFLGYGIAGAAWATMASQVIAAYMMIINL 314
L LG G+ G+A A SQ I ++ + +
Sbjct: 219 LLYVLGLGVMGSACANTVSQFIQMILLFLYI 249
>sp|B0W730|SMG8_CULQU Protein SMG8 OS=Culex quinquefasciatus GN=CPIJ003128 PE=3 SV=1
Length = 912
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 66 LSSSQEFASENDISDTSVSLSAEKEEEEKAVEVKTEGLADQSIWNQ--IKEIMKFTG--- 120
LS SQ+ S++ S+ + S+ +++EE K+ + T+G + Q + EI+ G
Sbjct: 587 LSGSQK--SQDSASNLTFSMDEKRDEENKSQKFGTQGEDEDETLEQETVNEIVIKVGEHS 644
Query: 121 --------PATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDN 160
P+T ++ G L + ++ Q S L LGP ++ N
Sbjct: 645 EDKAILRQPSTTEYLPGMLHAASPAGLLPQFPSWSLVCLGPSSIYTHN 692
>sp|O92532|POLG_HCVVP Genome polyprotein OS=Hepatitis C virus genotype 6h (isolate VN004)
PE=1 SV=3
Length = 3015
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 176 VATSLTNRDKNEVQHQISVLLFVG---LACGFSMLIFTKFFGMQALSAFTGSKNVHILPA 232
+ TSLT RDKNEV+ +I V+ LA + +++T ++G + G K P
Sbjct: 1044 IVTSLTGRDKNEVEGEIQVVSTATQSFLATAVNGVLWTVYYGAGS-KTLAGPKG----PV 1098
Query: 233 ANKYVQIRG--LAWPA 246
Y + + WPA
Sbjct: 1099 CQMYTNVDQDLVGWPA 1114
>sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3
Length = 979
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 2 QVKTFANHFVSSPNSRLKLLSQSLTSCSKTFLISTTLQWHSSLLPSRLCVFAPKDHQKRF 61
++K FANHF P + TSCSK + ++ + +HS+ R C+F R
Sbjct: 632 EIKDFANHF---PTYVHCSFCRYNTSCSKAY-VNHMMSFHSNRPSKRFCIFKKHSENLRG 687
Query: 62 IT-TCLS 67
IT CL+
Sbjct: 688 ITLVCLN 694
>sp|Q6FEY7|NORM_ACIAD Probable multidrug resistance protein NorM OS=Acinetobacter sp.
(strain ADP1) GN=norM PE=3 SV=1
Length = 449
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 132 MSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTNRDKNEVQHQ 191
+ LIDT + G S+ +LAA+ G L + +F + IAT+ LVA + R +
Sbjct: 31 LGLIDTIMAGHLSANDLAAIAVGVGLWMPVMLLFSAIMIATTPLVAEAKGARTPEHIPVI 90
Query: 192 ISVLLFVGLACG-FSMLIFTKFFGMQALSAFTGSKNVHILPAANKYVQIRGLAWPAVLTG 250
+ L+V ++ G +MLI M L G + P A ++ G PAV
Sbjct: 91 VRQSLWVAVSLGVIAMLILQL---MPFLLPILGVPE-SLQPKAGLFLHAIGFGMPAV--- 143
Query: 251 WVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGI--------AGAAWATMAS 302
+A G ++ G + + V S + + + L YGI AG +AT
Sbjct: 144 -TMYAALRGYSEALGYPRPVTVISLLALVVLVPLNYIFMYGIGPVPHLGSAGCGFATAIL 202
Query: 303 QVIAAYMMIINLNQKGYNA 321
Q ++M+I L Y A
Sbjct: 203 Q----WLMLITLASYIYRA 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,160,881
Number of Sequences: 539616
Number of extensions: 4096080
Number of successful extensions: 13641
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 13611
Number of HSP's gapped (non-prelim): 41
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)