Query 018781
Match_columns 350
No_of_seqs 296 out of 1885
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:57:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 6.4E-88 2.2E-92 642.4 33.3 321 23-349 41-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 1.3E-86 4.5E-91 627.9 32.0 318 31-350 5-322 (322)
3 3qj3_A Cathepsin L-like protei 100.0 2E-84 6.8E-89 614.8 32.6 307 36-349 10-331 (331)
4 3qt4_A Cathepsin-L-like midgut 100.0 1.1E-83 3.8E-88 608.3 29.1 304 37-349 16-329 (329)
5 1by8_A Protein (procathepsin K 100.0 1.3E-83 4.5E-88 605.8 28.8 301 43-349 6-314 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 1.8E-83 6.1E-88 605.2 29.1 303 41-349 5-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 2.1E-82 7.2E-87 598.1 29.3 298 43-349 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 1.4E-81 4.7E-86 591.1 28.3 295 46-349 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 4E-78 1.4E-82 566.9 24.4 285 47-349 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 6.8E-71 2.3E-75 538.0 24.0 277 63-347 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 3.5E-70 1.2E-74 516.1 20.1 274 66-349 2-312 (325)
12 3p5u_A Actinidin; SAD, cystein 100.0 2.2E-67 7.5E-72 472.8 23.1 217 133-350 1-218 (220)
13 1ppo_A Protease omega; hydrola 100.0 4E-67 1.4E-71 469.7 23.8 216 133-350 1-216 (216)
14 1cqd_A Protein (protease II); 100.0 6.5E-67 2.2E-71 469.9 24.6 217 132-350 2-218 (221)
15 1yal_A Chymopapain; hydrolase, 100.0 9.3E-67 3.2E-71 467.9 24.0 216 133-350 1-216 (218)
16 1iwd_A Ervatamin B; cysteine p 100.0 1.1E-66 3.7E-71 466.4 24.3 215 133-350 1-215 (215)
17 1s4v_A Cysteine endopeptidase; 100.0 1.4E-66 4.7E-71 470.1 23.1 219 132-350 1-220 (229)
18 2fo5_A Cysteine proteinase EP- 100.0 1.4E-66 4.8E-71 477.5 22.0 220 131-350 2-225 (262)
19 3u8e_A Papain-like cysteine pr 100.0 2.4E-66 8.1E-71 466.6 20.2 213 133-349 1-219 (222)
20 3pbh_A Procathepsin B; thiol p 100.0 3.4E-66 1.2E-70 487.8 21.9 262 75-348 11-313 (317)
21 2cio_A Papain; hydrolase/inhib 100.0 9.8E-66 3.4E-70 459.3 23.4 211 133-349 1-211 (212)
22 2bdz_A Mexicain; cysteine prot 100.0 1.3E-65 4.3E-70 459.2 23.1 212 133-350 1-212 (214)
23 3kwz_A Cathepsin K; enzyme inh 100.0 2.3E-65 8E-70 458.2 23.9 212 133-349 1-215 (215)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.4E-65 4.7E-70 458.8 22.2 211 133-349 1-211 (213)
25 1o0e_A Ervatamin C; plant cyst 100.0 4.1E-65 1.4E-69 453.9 23.0 208 133-350 1-208 (208)
26 3ovx_A Cathepsin S; hydrolase, 100.0 3.8E-65 1.3E-69 457.8 22.5 213 133-349 2-218 (218)
27 2b1m_A SPE31; papain-like, sug 100.0 8.6E-65 2.9E-69 462.7 24.1 215 132-350 1-225 (246)
28 2xu3_A Cathepsin L1; hydrolase 100.0 1.8E-64 6E-69 453.9 23.6 212 133-349 1-220 (220)
29 2oul_A Falcipain 2; cysteine p 100.0 1.4E-64 4.7E-69 460.4 22.8 215 131-350 16-241 (241)
30 3f75_A Toxopain-2, cathepsin L 100.0 6.9E-65 2.4E-69 457.9 19.6 217 131-349 5-224 (224)
31 3bwk_A Cysteine protease falci 100.0 1.5E-64 5E-69 460.7 21.9 215 131-350 18-243 (243)
32 8pch_A Cathepsin H; hydrolase, 100.0 2.9E-64 9.9E-69 452.7 22.0 211 133-349 1-218 (220)
33 3i06_A Cruzipain; autocatalyti 100.0 5.9E-64 2E-68 448.9 23.8 208 133-349 1-214 (215)
34 1m6d_A Cathepsin F, catsf; pap 100.0 5.5E-64 1.9E-68 448.8 22.6 208 133-349 1-213 (214)
35 3f5v_A DER P 1 allergen; aller 100.0 8.3E-64 2.8E-68 450.2 20.3 210 131-349 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 2.1E-59 7.2E-64 432.3 20.0 211 131-349 5-257 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 4.1E-59 1.4E-63 427.7 20.7 210 132-348 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 9.3E-59 3.2E-63 429.8 21.8 215 129-349 32-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 2E-53 6.9E-58 392.4 21.7 209 135-348 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 7.1E-52 2.4E-56 386.7 16.2 234 88-331 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.5E-40 5.2E-45 322.3 17.7 196 132-330 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 6.7E-40 2.3E-44 318.1 17.9 207 132-349 52-424 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 8.2E-35 2.8E-39 276.7 16.4 181 144-330 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 8.5E-19 2.9E-23 137.4 9.7 76 39-114 16-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 1.8E-17 6.2E-22 124.0 6.5 66 45-112 7-76 (80)
46 1pxv_A Cysteine protease; hydr 97.7 0.0011 3.6E-08 55.4 14.1 129 149-330 25-162 (183)
47 1x9y_A Cysteine proteinase; ha 97.5 0.0027 9.3E-08 58.5 14.5 129 149-330 201-338 (367)
48 1cv8_A Staphopain; cysteine pr 97.2 0.0057 1.9E-07 50.9 12.1 128 149-330 16-153 (174)
49 3erv_A Putative C39-like pepti 91.2 0.63 2.1E-05 41.0 7.8 63 246-315 126-196 (236)
50 3bb7_A Interpain A; cysteine p 50.8 27 0.00093 31.9 6.3 59 253-329 239-298 (321)
51 1dki_A Pyrogenic exotoxin B zy 48.3 33 0.0011 32.0 6.5 55 252-329 289-344 (371)
52 4d8b_A Streptopain; papain fol 43.0 36 0.0012 30.1 5.6 55 252-329 171-226 (261)
53 2r9f_A Calpain-1 catalytic sub 33.7 39 0.0013 31.0 4.5 28 290-317 244-275 (339)
54 1jb0_F Photosystem 1 reaction 31.8 20 0.00067 29.2 1.8 17 6-22 1-17 (164)
55 1ziv_A Calpain 9; cysteine pro 31.5 45 0.0015 30.6 4.5 28 290-317 243-274 (339)
56 2nqa_A Calpain 8; calpain, cal 29.6 49 0.0017 30.2 4.4 39 292-330 241-309 (326)
57 2a3m_A COG3005: nitrate/TMAO r 22.8 18 0.00063 28.3 0.1 8 6-13 1-8 (130)
58 1th5_A NIFU1; iron-sulfur clus 22.3 35 0.0012 23.9 1.5 27 145-173 37-63 (74)
59 2z79_A Endo-1,4-beta-xylanase 20.7 70 0.0024 26.6 3.2 28 291-319 62-89 (185)
60 3nb3_A Outer membrane protein 20.4 23 0.00078 32.1 0.2 13 6-18 1-13 (346)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=6.4e-88 Score=642.36 Aligned_cols=321 Identities=52% Similarity=0.919 Sum_probs=274.7
Q ss_pred hhcccccccCCCCCcCCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcccCCCCChH
Q 018781 23 SLAHDFSIVGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHE 102 (350)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsDlt~~ 102 (350)
.=..++|++.|.++-+.+++++.++|++||++|+|.|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|+|||.+
T Consensus 41 ~~~~~~s~~~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~e 120 (363)
T 3tnx_A 41 DDKMDFSIVGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSND 120 (363)
T ss_dssp -------------CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHH
T ss_pred CCcccccccCCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHH
Confidence 33456888999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred hHhhhhcCCCCCCCCCCC-CCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccC
Q 018781 103 EFKNKYLGLKPQFPTRRQ-PSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLS 181 (350)
Q Consensus 103 E~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS 181 (350)
||++++++.......... ...........+||++||||++|.|+||||||.||||||||+++++|++++++++..+.||
T Consensus 121 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LS 200 (363)
T 3tnx_A 121 EFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYS 200 (363)
T ss_dssp HHHHHHSCSSCSCCCCSSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBC
T ss_pred HHHHHhcccccccccccccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcC
Confidence 999998875443321111 1111111223479999999999999999999999999999999999999999999999999
Q ss_pred hHHhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhc
Q 018781 182 EQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAH 261 (350)
Q Consensus 182 ~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~ 261 (350)
||+|+||... +.||+||.+..|++|+.++ ||++|++|||.+.++.|...........+.++..++..++..++.+|++
T Consensus 201 eQ~LvdC~~~-~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~ 278 (363)
T 3tnx_A 201 EQELLDCDRR-SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN 278 (363)
T ss_dssp HHHHHHHCTT-SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTT
T ss_pred HHHHhcccCC-CCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHc
Confidence 9999999874 7899999999999999876 9999999999998888875544445566778888888889999999999
Q ss_pred CCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCccccc
Q 018781 262 QPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGIN 341 (350)
Q Consensus 262 GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~ 341 (350)
|||+|++++..++|+.|++|||..+|+..++|||+|||||+ +|||||||||++|||+|||||+||.++..|+|||+
T Consensus 279 gPvsvai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~ 354 (363)
T 3tnx_A 279 QPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLY 354 (363)
T ss_dssp SCEEEEECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTT
T ss_pred CCcEEEEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCcc
Confidence 99999999877899999999999999888999999999986 69999999999999999999999998777899999
Q ss_pred ccccceec
Q 018781 342 KMASIPLK 349 (350)
Q Consensus 342 ~~~~~p~~ 349 (350)
+.|+||+.
T Consensus 355 ~~a~yPik 362 (363)
T 3tnx_A 355 TSSFYPVK 362 (363)
T ss_dssp SCEEEEEC
T ss_pred ceeeeccc
Confidence 99999984
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-86 Score=627.95 Aligned_cols=318 Identities=54% Similarity=1.007 Sum_probs=273.7
Q ss_pred cCCCCCcCCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcccCCCCChHhHhhhhcC
Q 018781 31 VGYSPEHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLG 110 (350)
Q Consensus 31 ~~~~~~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsDlt~~E~~~~~~~ 110 (350)
+++.+....++.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||+++.+|++|+|+|+|||.+||++++++
T Consensus 5 ~~~~~~~~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g 84 (322)
T 1pci_A 5 VGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVG 84 (322)
T ss_dssp -------CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCC
T ss_pred ccCCcccccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcC
Confidence 33444455667888999999999999999988999999999999999999999987899999999999999999998876
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcC
Q 018781 111 LKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDT 190 (350)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~ 190 (350)
.+............+......+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~ 164 (322)
T 1pci_A 85 SLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER 164 (322)
T ss_dssp CBCCCSSCCCCSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT
T ss_pred CCCccccccccccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC
Confidence 54322111010111222223479999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEee
Q 018781 191 SFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEA 270 (350)
Q Consensus 191 ~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~ 270 (350)
.+.||+||++..|++|+.++ ||++|++|||.+..+.|.........++|.+|..++..++++|+++|++|||+|+|++
T Consensus 165 -~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~ 242 (322)
T 1pci_A 165 -RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVES 242 (322)
T ss_dssp -TSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECT
T ss_pred -CCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEec
Confidence 58899999999999999998 7999999999999999986533334578899999988889999999988999999999
Q ss_pred cCcccccccCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 271 SGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 271 ~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
+..+|+.|++|||.++|+..++|||+|||||+++|++|||||||||++|||+|||||+|+.+.+.|.|||++.++||++.
T Consensus 243 ~~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~~ 322 (322)
T 1pci_A 243 KGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 322 (322)
T ss_dssp TCHHHHTEEEEEECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECCC
T ss_pred ccccccccCCeEeCCCCCCCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEeC
Confidence 75789999999999889888899999999999999999999999999999999999999974445799999999999874
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=2e-84 Score=614.82 Aligned_cols=307 Identities=38% Similarity=0.713 Sum_probs=268.2
Q ss_pred CcCCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCC
Q 018781 36 EHLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGL 111 (350)
Q Consensus 36 ~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~ 111 (350)
.+...+..+..+|++||++|+|.|.+.+|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.
T Consensus 10 ~~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~ 89 (331)
T 3qj3_A 10 GSALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGL 89 (331)
T ss_dssp ---CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccc
Confidence 34456778899999999999999999899999999999999999999985 48999999999999999999988765
Q ss_pred CCCCCCCCCCCCccccc------ccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCC--CcccChH
Q 018781 112 KPQFPTRRQPSAEFSYR------DVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGN--LTSLSEQ 183 (350)
Q Consensus 112 ~~~~~~~~~~~~~~~~~------~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~--~~~lS~q 183 (350)
+.+...... ...+... ...+||++||||++|+||||||||.||||||||++++||++++++++. .++||+|
T Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ 168 (331)
T 3qj3_A 90 IMPADLHKN-GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQ 168 (331)
T ss_dssp CCCSSTTTT-CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHH
T ss_pred ccccccccc-CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHH
Confidence 433211000 1111111 224799999999999999999999999999999999999999999998 8999999
Q ss_pred HhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHh-cC
Q 018781 184 ELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALA-HQ 262 (350)
Q Consensus 184 ~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~-~G 262 (350)
+|+||+.. +.||+||++..|++|+.+++||++|++|||.+..+.|.... ....+++.+|..++..++++|+++|. +|
T Consensus 169 ~LvdC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~G 246 (331)
T 3qj3_A 169 QLVDCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDP-NQVAARLSGYVYLSGPDENMLADMVATKG 246 (331)
T ss_dssp HHHHHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCT-TSEEECCSEEEEESSCCHHHHHHHHHHHC
T ss_pred HHhhhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCc-ccceeEeeEEEEeCCCCHHHHHHHHHhCC
Confidence 99999975 88999999999999999988999999999999999998543 45667899999998889999999995 69
Q ss_pred CcEEEEeecCcccccccCCeeeC-CCC-CCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccc
Q 018781 263 PVSVAIEASGTDFQFYSGGVFTG-PCG-AELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGI 340 (350)
Q Consensus 263 PV~v~i~~~~~~f~~y~~Giy~~-~~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI 340 (350)
||+|+|+++ .+|+.|++|||.. .|+ ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||
T Consensus 247 PV~v~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI 322 (331)
T 3qj3_A 247 PVAVAFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCGI 322 (331)
T ss_dssp CEEEEECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGT
T ss_pred CEEEEEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccCc
Confidence 999999998 4599999999987 575 57899999999999999999999999999999999999999963 58999
Q ss_pred cccccceec
Q 018781 341 NKMASIPLK 349 (350)
Q Consensus 341 ~~~~~~p~~ 349 (350)
+++++||++
T Consensus 323 ~~~~~~p~v 331 (331)
T 3qj3_A 323 AGVASVPTL 331 (331)
T ss_dssp TTSCEEEEC
T ss_pred CCceeeeeC
Confidence 999999986
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=1.1e-83 Score=608.34 Aligned_cols=304 Identities=44% Similarity=0.762 Sum_probs=263.1
Q ss_pred cCCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCCC
Q 018781 37 HLTSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGLK 112 (350)
Q Consensus 37 ~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~~ 112 (350)
...++..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++ +++.+
T Consensus 16 ~~~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~ 94 (329)
T 3qt4_A 16 CSLPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRG 94 (329)
T ss_dssp ----CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHT
T ss_pred cccCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCc
Confidence 3455678889999999999999998889999999999999999999984 379999999999999999998 76644
Q ss_pred CCCCCCCC--CCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcC
Q 018781 113 PQFPTRRQ--PSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDT 190 (350)
Q Consensus 113 ~~~~~~~~--~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~ 190 (350)
+....... ....+.... .+||++||||++ +||||||||.||||||||++++||++++++++..++||||+|+||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~ 172 (329)
T 3qt4_A 95 KAQKPKHPENLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSS 172 (329)
T ss_dssp CCC------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCG
T ss_pred ccccccccccccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcc
Confidence 32110000 001111112 479999999999 99999999999999999999999999999999999999999999986
Q ss_pred C-CCCCCCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHh-cCCcEEEE
Q 018781 191 S-FNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALA-HQPVSVAI 268 (350)
Q Consensus 191 ~-~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~-~GPV~v~i 268 (350)
. ++.||+||++..|++|+.++ ||++|++|||.+..+.|.... ....+++.+|..++..++++|+++|. +|||+|+|
T Consensus 173 ~~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i 250 (329)
T 3qt4_A 173 SYGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDS-SQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAI 250 (329)
T ss_dssp GGTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEE
T ss_pred ccCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCc-ccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEE
Confidence 4 57899999999999999998 999999999999999998543 34567889999998889999999994 69999999
Q ss_pred eecCcccccccCCeeeC-CCC-CCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccc
Q 018781 269 EASGTDFQFYSGGVFTG-PCG-AELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASI 346 (350)
Q Consensus 269 ~~~~~~f~~y~~Giy~~-~~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~ 346 (350)
+++ .+|+.|++|||.. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||+++++|
T Consensus 251 ~a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~y 326 (329)
T 3qt4_A 251 DAT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASY 326 (329)
T ss_dssp CCC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEE
T ss_pred ecC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeE
Confidence 998 5999999999987 575 57899999999999999999999999999999999999999963 58999999999
Q ss_pred eec
Q 018781 347 PLK 349 (350)
Q Consensus 347 p~~ 349 (350)
|++
T Consensus 327 p~v 329 (329)
T 3qt4_A 327 PAL 329 (329)
T ss_dssp EEC
T ss_pred eeC
Confidence 986
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.3e-83 Score=605.83 Aligned_cols=301 Identities=44% Similarity=0.778 Sum_probs=262.9
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCCCCCCCCC
Q 018781 43 KLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTR 118 (350)
Q Consensus 43 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~~~~~~~~ 118 (350)
++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ..+|++|+|+|+|||.+||++.+++.+......
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 85 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHS 85 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcccc
Confidence 5678999999999999998899999999999999999999975 278999999999999999988877654322111
Q ss_pred CCCCCcccccccCC-CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCC
Q 018781 119 RQPSAEFSYRDVKA-LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCN 197 (350)
Q Consensus 119 ~~~~~~~~~~~~~~-lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~ 197 (350)
.....+......+ ||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+. .+.||+
T Consensus 86 -~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~gC~ 163 (314)
T 1by8_A 86 -RSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCG 163 (314)
T ss_dssp -CSSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSCGGG
T ss_pred -cCCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCc
Confidence 1111111111223 9999999999999999999999999999999999999999999999999999999996 588999
Q ss_pred CCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccc
Q 018781 198 GGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQ 276 (350)
Q Consensus 198 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~ 276 (350)
||++..|++|+.+++||++|++|||.+..+.|.... .....++.+|..++..++++|+++| .+|||+|+|+++.++|+
T Consensus 164 GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~ 242 (314)
T 1by8_A 164 GGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQ 242 (314)
T ss_dssp CCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCG-GGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHH
T ss_pred CCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCC-ccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhh
Confidence 999999999998777999999999999999998543 3345778899999877899999999 56999999999756899
Q ss_pred cccCCeeeCC-CCC-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 277 FYSGGVFTGP-CGA-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 277 ~y~~Giy~~~-~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
.|++|||..+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 243 ~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 243 FYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 314 (314)
T ss_dssp TEEEECBCCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTTSSCEEECC
T ss_pred hccCceecCCCCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCccCeeEEeeC
Confidence 9999999875 875 7899999999999999999999999999999999999999852 58999999999985
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.8e-83 Score=605.16 Aligned_cols=303 Identities=40% Similarity=0.725 Sum_probs=263.4
Q ss_pred hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCCCCCCC
Q 018781 41 MDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGLKPQFP 116 (350)
Q Consensus 41 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~~~~~~ 116 (350)
+.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ..+|++|+|+|+|||.+||++.+++.+....
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 345678999999999999988889999999999999999999975 2789999999999999999888776543321
Q ss_pred CCCCCCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhc-CC-CCC
Q 018781 117 TRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCD-TS-FNN 194 (350)
Q Consensus 117 ~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~-~~-~~~ 194 (350)
.. . ...+......+||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+ .. ++.
T Consensus 85 ~~-~-~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~ 162 (315)
T 2c0y_A 85 WQ-R-NITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNK 162 (315)
T ss_dssp GG-S-CBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCC
T ss_pred cc-C-CccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCC
Confidence 10 1 01111111236999999999999999999999999999999999999999999999999999999998 42 488
Q ss_pred CCCCCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCc
Q 018781 195 GCNGGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGT 273 (350)
Q Consensus 195 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~ 273 (350)
||+||++..|++|+.+++||++|++|||.+..+.|.... .....++.+|..++..++++|+++| .+|||+|+|+++.+
T Consensus 163 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~ 241 (315)
T 2c0y_A 163 GCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHP 241 (315)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCch
Confidence 999999999999998767999999999999999998543 3456788999999887899999999 56999999999756
Q ss_pred ccccccCCeeeCC-CCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 274 DFQFYSGGVFTGP-CGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 274 ~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
+|+.|++|||..+ |++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 242 ~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 242 SFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 315 (315)
T ss_dssp HHHTEEEEEECCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred hhhccCCCcccCCCCCCcCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccCcCceeEEeeC
Confidence 8999999999875 8878899999999999999999999999999999999999999852 58999999999985
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=2.1e-82 Score=598.12 Aligned_cols=298 Identities=43% Similarity=0.836 Sum_probs=260.5
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCCCCCCCCC
Q 018781 43 KLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTR 118 (350)
Q Consensus 43 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~~~~~~~~ 118 (350)
.++.+|++||++|+|.| +.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.++....
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 46789999999999999 8889999999999999999999974 37999999999999999999887765432211
Q ss_pred CCCCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCCCC
Q 018781 119 RQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCN 197 (350)
Q Consensus 119 ~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~gC~ 197 (350)
. ...+......+||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+.. ++.||+
T Consensus 85 -~-~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~ 162 (316)
T 1cs8_A 85 -K-GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 162 (316)
T ss_dssp -C-CEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGG
T ss_pred -c-CccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCC
Confidence 0 0111111223699999999999999999999999999999999999999999999999999999999853 478999
Q ss_pred CCchHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHh-cCCcEEEEeecCcccc
Q 018781 198 GGLMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALA-HQPVSVAIEASGTDFQ 276 (350)
Q Consensus 198 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~-~GPV~v~i~~~~~~f~ 276 (350)
||++..|++|+.+++||++|++|||.+..+.|.... ....+++.+|..++. ++++|+++|. +|||+|+|+++.++|+
T Consensus 163 GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~f~ 240 (316)
T 1cs8_A 163 GGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFL 240 (316)
T ss_dssp CBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHHHH
T ss_pred CCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCC-ccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChhhc
Confidence 999999999998667999999999999999998543 345678999999987 8999999994 6999999999756899
Q ss_pred cccCCeeeCC-CCC-CCCeEEEEEEEe---ec-CCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 277 FYSGGVFTGP-CGA-ELDHGVAAVGYG---KS-KGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 277 ~y~~Giy~~~-~~~-~~~Hav~iVGyg---~~-~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
.|++|||..+ |+. .++|||+||||| ++ +|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 241 ~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 241 FYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 316 (316)
T ss_dssp TEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEECC
T ss_pred cccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---CccCccceeeEeeC
Confidence 9999999875 875 789999999999 66 78999999999999999999999999863 58999999999985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.4e-81 Score=591.08 Aligned_cols=295 Identities=42% Similarity=0.826 Sum_probs=256.1
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcC-CCCCCCCCCC
Q 018781 46 ELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLG-LKPQFPTRRQ 120 (350)
Q Consensus 46 ~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~-~~~~~~~~~~ 120 (350)
.+|++||++|+|.|.+.+|+.+| .||++|+++|++||++ +.+|++|+|+|+|||.+||++++++ .+........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 57999999999999888899999 9999999999999975 4789999999999999999987776 4322111000
Q ss_pred CCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCCCCCC
Q 018781 121 PSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCNGG 199 (350)
Q Consensus 121 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~gC~GG 199 (350)
...+..... +||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+.. ++.||+||
T Consensus 82 -~~~~~~~~~-~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG 159 (310)
T 2o6x_A 82 -GVPYEANNR-AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGG 159 (310)
T ss_dssp -SEECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCC
T ss_pred -CCccccccC-CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCC
Confidence 011111122 699999999999999999999999999999999999999999999999999999999853 47899999
Q ss_pred chHHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccc
Q 018781 200 LMDYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFY 278 (350)
Q Consensus 200 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y 278 (350)
++..|++|+. ++||++|++|||.+..+.|.... ....+++.+|..++..++++|+++| .+|||+|+|+++ .+|+.|
T Consensus 160 ~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~~Y 236 (310)
T 2o6x_A 160 LMENAYQYLK-QFGLETESSYPYTAVEGQCRYNK-QLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFMMY 236 (310)
T ss_dssp CHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCG-GGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHHTE
T ss_pred CHHHHHHHHH-HCCcCchhcCCCCCCCCCccCCC-CCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhhhC
Confidence 9999999998 56999999999999999998543 3456789999999877899999999 569999999997 699999
Q ss_pred cCCeeeC-CCCC-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 279 SGGVFTG-PCGA-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 279 ~~Giy~~-~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
++|||.. .|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||+++++||++
T Consensus 237 ~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 237 RSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASLASLPMV 306 (310)
T ss_dssp EEEEECCSSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSEEEEEE
T ss_pred CCceecCCCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccceeeEEEe
Confidence 9999985 5774 7899999999999999999999999999999999999999853 58999999999986
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=4e-78 Score=566.93 Aligned_cols=285 Identities=31% Similarity=0.565 Sum_probs=246.1
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcccCCCCChHhHhhhhcCCCCCCCCCCCCCCccc
Q 018781 47 LFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFS 126 (350)
Q Consensus 47 ~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~ 126 (350)
+|++||++|+|.|.+.+|+.+|+.||++|+++|++ |+ + |+|+|+|||.+||++++++.+...+..... ..+.
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~---g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~-~~~~ 78 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G---AINHLSDLSLDEFKNRFLMSAEAFEHLKTQ-FDLN 78 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C---CCCTTTTSCHHHHHHHHSBCHHHHHHHHHH-HC--
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C---CCCcccCCCHHHHHHHhcCCCCccccccCC-cccc
Confidence 59999999999999889999999999999999999 75 2 999999999999998666532111000000 0000
Q ss_pred c-----cccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCch
Q 018781 127 Y-----RDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLM 201 (350)
Q Consensus 127 ~-----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~ 201 (350)
. ....+||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+. ..||+||++
T Consensus 79 ~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG~~ 156 (312)
T 1xkg_A 79 AETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGDTI 156 (312)
T ss_dssp ---CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCH
T ss_pred cccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCCCH
Confidence 0 012379999999999999999999999999999999999999999999999999999999982 289999999
Q ss_pred HHHHHHHHHhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-h-cCCcEEEEeecCc-ccccc
Q 018781 202 DYAFKYIVASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-A-HQPVSVAIEASGT-DFQFY 278 (350)
Q Consensus 202 ~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~-~GPV~v~i~~~~~-~f~~y 278 (350)
..|++|+.+. ||++|++|||.+..+.|. . .....+++++|..++..++++|+++| . +|||+|+|+++.. +|+.|
T Consensus 157 ~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y 233 (312)
T 1xkg_A 157 PRGIEYIQHN-GVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHY 233 (312)
T ss_dssp HHHHHHHHHH-CEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTC
T ss_pred HHHHHHHHHc-CCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccccccccc
Confidence 9999999985 999999999999999998 3 33456889999999877899999999 4 6999999999833 89999
Q ss_pred cCCeeeC-CCC-C-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 279 SGGVFTG-PCG-A-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 279 ~~Giy~~-~~~-~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
++|||.. .|+ . . +|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 234 ~~GVy~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 234 DGRTIIQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 302 (312)
T ss_dssp CSSSCBCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEEEC
T ss_pred CCcEEcCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEeec
Confidence 9999986 576 4 6 9999999999999999999999999999999999999983 58999999999986
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=6.8e-71 Score=538.02 Aligned_cols=277 Identities=31% Similarity=0.553 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcEEEE-cccCCCCChHhHhhhhcCCCCCCCC-CCCCCCcccccccCCCCCeeecc
Q 018781 63 EEKLHRFEIFKENLKHIDQRNKEVTSYWLG-LNEFADMSHEEFKNKYLGLKPQFPT-RRQPSAEFSYRDVKALPKSVDWR 140 (350)
Q Consensus 63 ~E~~~R~~if~~n~~~I~~~N~~~~s~~~g-~N~fsDlt~~E~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lP~~~Dwr 140 (350)
.|+.+|++||++|+++|++||+++.+|+++ +|+|+|||.+||++++++.+..... ..............+||++||||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR 214 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDWR 214 (441)
T ss_dssp -----------------------------------------------------------------------CCCSCEETT
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEECC
Confidence 466799999999999999999988899998 8999999999999988654322210 00000111112335799999999
Q ss_pred CCC---CCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCc--ccChHHhhhhcCCCCCCCCCCchHHH-HHHHHHhCCC
Q 018781 141 KKG---AVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLT--SLSEQELIDCDTSFNNGCNGGLMDYA-FKYIVASGGL 214 (350)
Q Consensus 141 ~~g---~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~--~lS~q~l~~c~~~~~~gC~GG~~~~a-~~~~~~~~Gi 214 (350)
+++ +|+||||||.||||||||++++||++++++++..+ .||||+|+||+. .+.||+||++..+ ++|++++ ||
T Consensus 215 ~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~~~~aa~~yi~~~-Gi 292 (441)
T 3pdf_A 215 NVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGFPYLIAGKYAQDF-GL 292 (441)
T ss_dssp CBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHTTHHHHHT-CB
T ss_pred cCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCchhHHHHHHHHhc-CC
Confidence 963 89999999999999999999999999999998764 599999999996 4899999999987 8999886 99
Q ss_pred CCCCCCccccCCCccCCCccCceeEEEeeeEecC----CCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeCCCC-
Q 018781 215 HKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVP----ENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGPCG- 288 (350)
Q Consensus 215 ~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~----~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~~~- 288 (350)
++|++|||.+..+.|.... ......+.+|..++ ..++++|+++| .+|||+|+|+++ ++|+.|++|||..++.
T Consensus 293 ~tE~~yPY~~~~~~C~~~~-~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~~~ 370 (441)
T 3pdf_A 293 VEEACFPYTGTDSPCKMKE-DCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTGLR 370 (441)
T ss_dssp CBGGGSCCCSSCCCSCCCS-SCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC---
T ss_pred CcHHHeeecccCCCCCCcc-ccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCCCC
Confidence 9999999999999998533 23445677787775 35799999998 679999999997 7999999999986432
Q ss_pred ------CCCCeEEEEEEEeec--CCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccce
Q 018781 289 ------AELDHGVAAVGYGKS--KGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIP 347 (350)
Q Consensus 289 ------~~~~Hav~iVGyg~~--~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p 347 (350)
..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |+|||+++++++
T Consensus 371 ~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~~~a~ 433 (441)
T 3pdf_A 371 DPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIAVAA 433 (441)
T ss_dssp CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCCEEE
T ss_pred cccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCceEEe
Confidence 247999999999985 6899999999999999999999999995 589999998754
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=3.5e-70 Score=516.11 Aligned_cols=274 Identities=25% Similarity=0.459 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHhccCC-CcEEEEcc-cCCCCChHhHhhhhcCCCCCCCCC-CCCCCcccc-cccCCCCCeeeccC
Q 018781 66 LHRFEIFKENLKHIDQRNKEV-TSYWLGLN-EFADMSHEEFKNKYLGLKPQFPTR-RQPSAEFSY-RDVKALPKSVDWRK 141 (350)
Q Consensus 66 ~~R~~if~~n~~~I~~~N~~~-~s~~~g~N-~fsDlt~~E~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~lP~~~Dwr~ 141 (350)
+.|+..+..+.++|++||+++ .+|++++| +|+|||.+||++++ +........ ......+.. ....+||++||||+
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~ 80 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPKRRFTEEEARAPLPSSFDSAE 80 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccCccccccccccCCCCcEehhH
Confidence 357788888999999999874 89999999 89999999998764 433221110 000111111 11257999999999
Q ss_pred C----CCCCccccCCCCcchHHHHHHHHHHHHHHHHcCC-CcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCC
Q 018781 142 K----GAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGN-LTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHK 216 (350)
Q Consensus 142 ~----g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~-~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~ 216 (350)
+ |.|+||||||.||||||||++++||++++++++. .++||||+|+||+...+.||+||++..|++|+.++ |+++
T Consensus 81 ~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~~ 159 (325)
T 3hhi_A 81 AWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLVS 159 (325)
T ss_dssp HSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBCB
T ss_pred hcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCCc
Confidence 8 8999999999999999999999999999999987 89999999999986557899999999999999988 8999
Q ss_pred CCCCccc-cC----------CCccCC--------------Cc-cCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEe
Q 018781 217 EEDYPYL-ME----------EGTCED--------------KK-EEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIE 269 (350)
Q Consensus 217 e~~yPY~-~~----------~~~c~~--------------~~-~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~ 269 (350)
|++|||. .. .+.|.. .. .......+..|. + .++++|+++| .+|||+|+|+
T Consensus 160 e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i~ 236 (325)
T 3hhi_A 160 DYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAFD 236 (325)
T ss_dssp TTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEEE
T ss_pred ccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEEE
Confidence 9999998 32 245651 00 011233556676 5 5899999999 6899999999
Q ss_pred ecCcccccccCCeeeCCCCC-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCccccccccccee
Q 018781 270 ASGTDFQFYSGGVFTGPCGA-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPL 348 (350)
Q Consensus 270 ~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~ 348 (350)
++ ++|+.|++|||..+++. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++++++++
T Consensus 237 ~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~~~~g~ 311 (325)
T 3hhi_A 237 VY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDGGSAGI 311 (325)
T ss_dssp EE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCEEEEE
T ss_pred ec-cccccccCceecCCCCCCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccceEEee
Confidence 97 79999999999887665 459999999999999999999999999999999999999985 5899999998776
Q ss_pred c
Q 018781 349 K 349 (350)
Q Consensus 349 ~ 349 (350)
.
T Consensus 312 p 312 (325)
T 3hhi_A 312 P 312 (325)
T ss_dssp E
T ss_pred c
Confidence 3
No 12
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=2.2e-67 Score=472.83 Aligned_cols=217 Identities=56% Similarity=1.048 Sum_probs=199.8
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCC-CCCCCCCchHHHHHHHHHh
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSF-NNGCNGGLMDYAFKYIVAS 211 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~-~~gC~GG~~~~a~~~~~~~ 211 (350)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|++|.... +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999753 7899999999999999988
Q ss_pred CCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCC
Q 018781 212 GGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAEL 291 (350)
Q Consensus 212 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~ 291 (350)
+|+++|++|||....+.|.........+++.+|..++..++++|+++|++|||+++|+++.++|+.|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 89999999999999999985433334577889999988899999999999999999999757899999999998898889
Q ss_pred CeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 292 DHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 292 ~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
+|||+|||||++++++|||||||||++|||+|||||+|+.+ +.|+|||++.++||++.
T Consensus 161 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-~~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 161 DHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVG-GVGQCGIAKKASYPVKY 218 (220)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCC-TTCGGGTTSSCEEEECS
T ss_pred ceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCC-CCCccCcccccceEEEe
Confidence 99999999999999999999999999999999999999975 24699999999999863
No 13
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=4e-67 Score=469.67 Aligned_cols=216 Identities=56% Similarity=1.082 Sum_probs=198.9
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|++|.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 57899999999999999998
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||......|.........+++.+|..++..++++|+++|++|||+++|+++.++|+.|++|||+.+|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD 158 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCC
T ss_pred CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCC
Confidence 79999999999998999854333456788999999877899999999889999999996578999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
|||+|||||+++|++|||||||||++|||+|||||+|+.+++.|+|||++++.||++.
T Consensus 159 HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~~ 216 (216)
T 1ppo_A 159 HAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216 (216)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEECC
T ss_pred EEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEeeC
Confidence 9999999999999999999999999999999999999975445799999999999974
No 14
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=6.5e-67 Score=469.87 Aligned_cols=217 Identities=58% Similarity=1.109 Sum_probs=199.6
Q ss_pred CCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHh
Q 018781 132 ALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVAS 211 (350)
Q Consensus 132 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~ 211 (350)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|++|... +.||+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999999999999999864 7899999999999999988
Q ss_pred CCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCC
Q 018781 212 GGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAEL 291 (350)
Q Consensus 212 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~ 291 (350)
+|+++|++|||....+.|.... ....+++.+|..++..++++|+++|++|||+|+|++..++|+.|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 159 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTV-NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISA 159 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSS-CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCC-CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcC
Confidence 7999999999999989998543 345678889999988889999999988999999999756899999999998888889
Q ss_pred CeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 292 DHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 292 ~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
+|||+|||||+++|++|||||||||++|||+|||||+|+.++..|+|||+++++||+++
T Consensus 160 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 218 (221)
T 1cqd_A 160 NHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKK 218 (221)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred CeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEec
Confidence 99999999999999999999999999999999999999965445799999999999974
No 15
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=9.3e-67 Score=467.91 Aligned_cols=216 Identities=56% Similarity=1.091 Sum_probs=198.6
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|++|.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999984 57899999999999999998
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||......|.........+++.+|..++..++++|+++|.+|||+++|+++.++|+.|++|||+.+|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLD 158 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCC
Confidence 79999999999998899854333456788999999888899999999889999999996578999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
|||+|||||+++|++|||||||||++|||+|||||+|+.++..|+|||+++++||++.
T Consensus 159 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 216 (218)
T 1yal_A 159 HAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKG 216 (218)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECC
T ss_pred EEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEe
Confidence 9999999999999999999999999999999999999975445799999999999863
No 16
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-66 Score=466.39 Aligned_cols=215 Identities=56% Similarity=1.087 Sum_probs=198.2
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|+||... +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 79999999999999999999999999999999999999999999999999999999864 78999999999999999887
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||......|.... ...+++.+|..++..++++|+++|++|||+++|+++..+|+.|++|||+.+|+..++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 157 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQN 157 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CcccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCC
Confidence 999999999999989998543 356788899999888899999999889999999997448999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
|||+|||||++++++|||||||||++|||+|||||+|+.++..|+|||+++++||++.
T Consensus 158 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 215 (215)
T 1iwd_A 158 HGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215 (215)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred EEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeeeC
Confidence 9999999999999999999999999999999999999975444799999999999974
No 17
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-66 Score=470.06 Aligned_cols=219 Identities=66% Similarity=1.178 Sum_probs=199.7
Q ss_pred CCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHh
Q 018781 132 ALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVAS 211 (350)
Q Consensus 132 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~ 211 (350)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|++|....+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986457899999999999999988
Q ss_pred CCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCC
Q 018781 212 GGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAEL 291 (350)
Q Consensus 212 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~ 291 (350)
+|+++|++|||......|.........+++.+|..++..+++.|+++|.+|||+++|++..++|+.|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 79999999999999889975322334578889999988789999999988999999999557899999999998888888
Q ss_pred CeEEEEEEEeecC-CeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 292 DHGVAAVGYGKSK-GSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 292 ~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
+|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|+|||++++.||++.
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 220 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKK 220 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEec
Confidence 9999999999987 8999999999999999999999999975445799999999999863
No 18
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.4e-66 Score=477.48 Aligned_cols=220 Identities=63% Similarity=1.113 Sum_probs=200.6
Q ss_pred CCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHH
Q 018781 131 KALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVA 210 (350)
Q Consensus 131 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~ 210 (350)
.+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|+||....+.||+||++..|++|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999998645789999999999999998
Q ss_pred hCCCCCCCCCccccCCCccCCCc--cCce-eEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCC
Q 018781 211 SGGLHKEEDYPYLMEEGTCEDKK--EEME-VVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPC 287 (350)
Q Consensus 211 ~~Gi~~e~~yPY~~~~~~c~~~~--~~~~-~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~ 287 (350)
++|+++|++|||....+.|.... .... .+++.+|..++..+++.|+++|++|||+++|+++.++|+.|++|||+.+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 77999999999999999998432 1234 67889999998788999999998899999999975689999999999888
Q ss_pred CCCCCeEEEEEEEeec-CCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 288 GAELDHGVAAVGYGKS-KGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 288 ~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
++.++|||+|||||++ +|++|||||||||++|||+|||||+|+.+++.|.|||++.++||++.
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~ 225 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKT 225 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECC
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEec
Confidence 8888999999999997 58999999999999999999999999986556889999999999863
No 19
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=2.4e-66 Score=466.64 Aligned_cols=213 Identities=50% Similarity=0.992 Sum_probs=192.3
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|++|... +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999999999999999975 88999999999999999988
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccC-CeeeC-CCCC-
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSG-GVFTG-PCGA- 289 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~-Giy~~-~~~~- 289 (350)
||++|++|||.+....|...... .+++.+|..++ .++++|+++|++|||+++|+++..+|+.|++ |||+. +|+.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~ 156 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDD 156 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCC
T ss_pred CccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCC
Confidence 99999999999999999864432 67888999998 6899999999889999999997558999999 99988 7765
Q ss_pred --CCCeEEEEEEEeecC-CeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 290 --ELDHGVAAVGYGKSK-GSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 290 --~~~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
.++|||+|||||+++ +++|||||||||++|||+|||||+|+.+++.|+|||+++++||++
T Consensus 157 ~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 157 PATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp GGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 679999999999988 899999999999999999999999998755679999999999986
No 20
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=3.4e-66 Score=487.83 Aligned_cols=262 Identities=27% Similarity=0.522 Sum_probs=210.1
Q ss_pred HHHHHHHhccCCCcEEEEcccCCCCChHhHhhhhcCCCCCCCCCCCCCCcccccccCCCCCeeeccCC----CCCCcccc
Q 018781 75 NLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKK----GAVTPVKN 150 (350)
Q Consensus 75 n~~~I~~~N~~~~s~~~g~N~fsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pV~d 150 (350)
+.++|++||+.+.+|++++| |+|++.||++. +++.+...... ...+......+||++||||++ +.|+||||
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~---~~~~~~~~~~~lP~s~DwR~~~~~c~~vtpVkd 85 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP---PQRVMFTEDLKLPASFDAREQWPQCPTIKEIRD 85 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC---SEEECCCSCCCCCSSEEHHHHCTTCGGGTCCCB
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHHHHH-HcCCCCCcccc---CcccccccccCCCCCEechhccCCCCCcCCccc
Confidence 45789999987889999999 99988887754 55554332211 111111223579999999987 67999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHcCC--CcccChHHhhhhcC-CCCCCCCCCchHHHHHHHHHhCCCCCCCCC-------
Q 018781 151 QGSCGSCWAFSTVAAVEGINQIVSGN--LTSLSEQELIDCDT-SFNNGCNGGLMDYAFKYIVASGGLHKEEDY------- 220 (350)
Q Consensus 151 Qg~cGsCwAfA~~~~lE~~~~~~~~~--~~~lS~q~l~~c~~-~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y------- 220 (350)
||.||||||||++++||++++++++. .+.||||+|+||+. ..+.||+||++..|++|++++ ||++|.+|
T Consensus 86 Qg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~~c~ 164 (317)
T 3pbh_A 86 QGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHVGCR 164 (317)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCCBSS
T ss_pred cCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCCCCc
Confidence 99999999999999999999999874 79999999999986 457899999999999999988 89999888
Q ss_pred cccc---------CCCccCCC--------ccCc--------eeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcc
Q 018781 221 PYLM---------EEGTCEDK--------KEEM--------EVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTD 274 (350)
Q Consensus 221 PY~~---------~~~~c~~~--------~~~~--------~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~ 274 (350)
||.. ..+.|... .+.. ..........++ .++++|+++| .+|||+|+|+++ ++
T Consensus 165 PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~-~~ 242 (317)
T 3pbh_A 165 PYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVY-SD 242 (317)
T ss_dssp CCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEE-GG
T ss_pred CcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEec-cc
Confidence 9984 23455421 0000 001111223454 4799999998 689999999997 89
Q ss_pred cccccCCeeeCCCCCC-CCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCccccccccccee
Q 018781 275 FQFYSGGVFTGPCGAE-LDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPL 348 (350)
Q Consensus 275 f~~y~~Giy~~~~~~~-~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~ 348 (350)
|+.|++|||..+|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++.++.++
T Consensus 243 f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 243 FLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAGI 313 (317)
T ss_dssp GGGEEEEEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEECC
T ss_pred ccCCCCcEEccCCCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEeee
Confidence 9999999999887664 49999999999999999999999999999999999999995 5899999987654
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=9.8e-66 Score=459.35 Aligned_cols=211 Identities=52% Similarity=1.000 Sum_probs=193.9
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|++|.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 47899999999999999987
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||......|.........+++.+|..++..++++|+++|++|||+++|+++..+|+.|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~ 158 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 158 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCC
Confidence 79999999999998999854323456788999999877899999999889999999997458999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
|||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||+++++||++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 159 HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 9999999998 8999999999999999999999997544579999999999986
No 22
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=1.3e-65 Score=459.18 Aligned_cols=212 Identities=55% Similarity=1.125 Sum_probs=195.7
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 47899999999999999998
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||....+.|.........+++++|..++..++++|+++|.+|||+++|+++.++|+.|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTD 158 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCC
Confidence 99999999999998899865433456889999999888899999999779999999997568999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
|||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||+++++||+++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (214)
T 2bdz_A 159 HAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKG 212 (214)
T ss_dssp EEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC
T ss_pred eEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEec
Confidence 9999999998 89999999999999999999999975445799999999999974
No 23
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=2.3e-65 Score=458.20 Aligned_cols=212 Identities=50% Similarity=0.923 Sum_probs=195.3
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|++|.. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999997 588999999999999999888
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeC-CCC-C
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTG-PCG-A 289 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~-~~~-~ 289 (350)
|+++|++|||....+.|.... .....++.+|..++..++++||++| .+|||+++|+++.++|+.|++|||.. .|. .
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 158 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD 158 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTT
T ss_pred CccccccCCCccCCCccccCC-CCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCC
Confidence 999999999999999998543 3456788999999877899999999 56999999999756899999999976 464 4
Q ss_pred CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 290 ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 290 ~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
.++|||+|||||++++++|||||||||++|||+|||||+|+.+ |+|||+++++||++
T Consensus 159 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 159 NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred hhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 6899999999999999999999999999999999999999963 58999999999985
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-65 Score=458.84 Aligned_cols=211 Identities=55% Similarity=1.071 Sum_probs=195.1
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|++|.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999997 48899999999999999998
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||.+....|.........+++.+|..++..+++.++++|++|||+++|+++.++|+.|++|||..+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 158 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSID 158 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccC
Confidence 99999999999999999854444566788999999887888888888899999999997578999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
|||+|||||+ +|||||||||++|||+|||||+|+.+.+.|+|||+++++||++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 159 HAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred ceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 9999999997 8999999999999999999999997544579999999999986
No 25
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=4.1e-65 Score=453.88 Aligned_cols=208 Identities=58% Similarity=1.096 Sum_probs=191.9
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||||+|+||.. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999986 478999999999999999877
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCCCCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGAELD 292 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 292 (350)
|+++|++|||......|+. ....+++.+|..++..++++|+++|++|||+++|+++..+|+.|++|||+.+|+..++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 156 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLN 156 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCC
Confidence 9999999999999899985 2345678899999877899999999889999999997458999999999988888889
Q ss_pred eEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 293 HGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 293 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
|||+|||||+ +|||||||||++|||+|||||+|+.+ .|+|||+++++||++.
T Consensus 157 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~~ 208 (208)
T 1o0e_A 157 HGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTKA 208 (208)
T ss_dssp EEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEECC
T ss_pred EEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeecC
Confidence 9999999998 89999999999999999999999862 2589999999999863
No 26
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=3.8e-65 Score=457.77 Aligned_cols=213 Identities=46% Similarity=0.891 Sum_probs=195.5
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhc-CC-CCCCCCCCchHHHHHHHHH
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCD-TS-FNNGCNGGLMDYAFKYIVA 210 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~-~~-~~~gC~GG~~~~a~~~~~~ 210 (350)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|++|. .. .+.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 4789999999999999987
Q ss_pred hCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeC-CCC
Q 018781 211 SGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTG-PCG 288 (350)
Q Consensus 211 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~-~~~ 288 (350)
++|+++|++|||....+.|.... .....++.+|..++..++++||++| .+|||+++|++..++|+.|++|||.. .|.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCCC-ccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 67999999999999999998543 4556788999999877899999999 56999999999756899999999986 476
Q ss_pred CCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 289 AELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 289 ~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
..++|||+|||||++++++|||||||||++|||+|||||+|+.+ |+|||+++++||++
T Consensus 161 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 78899999999999999999999999999999999999999852 58999999999986
No 27
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=8.6e-65 Score=462.72 Aligned_cols=215 Identities=48% Similarity=0.894 Sum_probs=195.2
Q ss_pred CCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHh
Q 018781 132 ALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVAS 211 (350)
Q Consensus 132 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~ 211 (350)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|++|.. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986 57899999999999999987
Q ss_pred CCCCCCCCCccccCCCccCCCccCceeEEEeee---EecCCCcHHHHHHHHhc----CCcEEEEeecCcccccccCCeee
Q 018781 212 GGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGY---QDVPENDEQSLLKALAH----QPVSVAIEASGTDFQFYSGGVFT 284 (350)
Q Consensus 212 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~---~~v~~~~~~~i~~al~~----GPV~v~i~~~~~~f~~y~~Giy~ 284 (350)
+|+++|++|||......|.... ....+++++| ..++..++++|+++|.+ |||+++|++ ++|+.|++|||+
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANE-IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYD 156 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGG-CCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEEC
T ss_pred CCcCccccccccCCCCcCcCCC-CCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeec
Confidence 7999999999999989998542 3345678888 88887789999999955 999999998 689999999998
Q ss_pred C-CCCCC--CCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 285 G-PCGAE--LDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 285 ~-~~~~~--~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
. .|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+.++..|+|||++.++||++.
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~ 225 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIE 225 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECC
T ss_pred CCCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEec
Confidence 7 68764 899999999999999999999999999999999999999974444799999999999863
No 28
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1.8e-64 Score=453.94 Aligned_cols=212 Identities=50% Similarity=0.988 Sum_probs=192.5
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCCCCCCchHHHHHHHHHh
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCNGGLMDYAFKYIVAS 211 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~gC~GG~~~~a~~~~~~~ 211 (350)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||||+|++|... ++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999864 37899999999999999755
Q ss_pred CCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeCC-CCC
Q 018781 212 GGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGP-CGA 289 (350)
Q Consensus 212 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~-~~~ 289 (350)
.|+++|++|||......|.... .....++++|..++. ++++||++| .+|||+++|+++.++|+.|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNP-KYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCG-GGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCCC-CCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 6999999999999989998543 345678899999987 899999999 569999999997568999999999875 764
Q ss_pred -CCCeEEEEEEEe----ecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 290 -ELDHGVAAVGYG----KSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 290 -~~~Hav~iVGyg----~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
.++|||+||||| ++++++|||||||||++|||+|||||+|+.+ |+|||+++++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 789999999999 6678999999999999999999999999863 58999999999985
No 29
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.4e-64 Score=460.36 Aligned_cols=215 Identities=42% Similarity=0.839 Sum_probs=195.7
Q ss_pred CCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHH
Q 018781 131 KALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVA 210 (350)
Q Consensus 131 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~ 210 (350)
.+||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|++|... +.||+||++..|++|+.+
T Consensus 16 ~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~-~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 16 NFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK-NYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT-SCTTBCBCHHHHHHHHHH
T ss_pred ccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC-CCCCCCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999864 789999999999999988
Q ss_pred hCCCCCCCCCccccCCCc-cCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCC
Q 018781 211 SGGLHKEEDYPYLMEEGT-CEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGA 289 (350)
Q Consensus 211 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 289 (350)
++|+++|++|||....+. |.... ....+++.+|..++..++++||++| |||+++|+++ ++|+.|++|||+.+|+.
T Consensus 95 ~~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~ 170 (241)
T 2oul_A 95 LGGICPDGDYPYVSDAPNLCNIDR-CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGD 170 (241)
T ss_dssp TTSBCBTTSSCCCTTSCCCCCTTS-SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCS
T ss_pred hCCcCccccCCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCC
Confidence 669999999999998888 98543 3456788999999887899999999 9999999997 79999999999887876
Q ss_pred CCCeEEEEEEEeecC----------CeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 290 ELDHGVAAVGYGKSK----------GSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 290 ~~~Hav~iVGyg~~~----------g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
.++|||+|||||+++ +++|||||||||++|||+|||||+|+.++..+.|||+++++||++.
T Consensus 171 ~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~~ 241 (241)
T 2oul_A 171 QLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLIE 241 (241)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEECC
T ss_pred CCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEeeC
Confidence 689999999999975 7899999999999999999999999976433459999999999873
No 30
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=6.9e-65 Score=457.94 Aligned_cols=217 Identities=50% Similarity=0.955 Sum_probs=197.9
Q ss_pred CCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCCCCCCchHHHHHHHH
Q 018781 131 KALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCNGGLMDYAFKYIV 209 (350)
Q Consensus 131 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~gC~GG~~~~a~~~~~ 209 (350)
.+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|++|... ++.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999864 378999999999999999
Q ss_pred HhCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCC
Q 018781 210 ASGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGA 289 (350)
Q Consensus 210 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 289 (350)
+++|+++|++|||....+.|.... .....++.+|..++..++++|+++|.+|||+++|++..++|+.|++|||++.|+.
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~ 163 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQS-CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT 163 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGG-SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcCC-CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC
Confidence 866999999999999988998543 3344678899999888899999999999999999997558999999999988888
Q ss_pred CCCeEEEEEEEeec--CCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 290 ELDHGVAAVGYGKS--KGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 290 ~~~Hav~iVGyg~~--~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
.++|||+|||||++ ++++|||||||||++|||+|||||+|+.+ ..|.|||+++++||++
T Consensus 164 ~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 89999999999997 88999999999999999999999999963 1368999999999985
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.5e-64 Score=460.74 Aligned_cols=215 Identities=44% Similarity=0.821 Sum_probs=195.1
Q ss_pred CCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHH
Q 018781 131 KALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVA 210 (350)
Q Consensus 131 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~ 210 (350)
.+||++||||++|+++||||||.||||||||++++||++++++++..++||||+|++|... +.||+||++..|++|+.+
T Consensus 18 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~-~~gC~GG~~~~a~~y~~~ 96 (243)
T 3bwk_A 18 KLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK-NNGCYGGYITNAFDDMID 96 (243)
T ss_dssp CCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT-SCGGGCCCHHHHHHHHHH
T ss_pred ccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999864 789999999999999998
Q ss_pred hCCCCCCCCCccccCCCc-cCCCccCceeEEEeeeEecCCCcHHHHHHHHhcCCcEEEEeecCcccccccCCeeeCCCCC
Q 018781 211 SGGLHKEEDYPYLMEEGT-CEDKKEEMEVVTISGYQDVPENDEQSLLKALAHQPVSVAIEASGTDFQFYSGGVFTGPCGA 289 (350)
Q Consensus 211 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~ 289 (350)
++|+++|++|||....+. |.... ....+++.+|..++..++++||++| |||+++|+++ ++|+.|++|||+..|+.
T Consensus 97 ~~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~ 172 (243)
T 3bwk_A 97 LGGLCSQDDYPYVSNLPETCNLKR-CNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGA 172 (243)
T ss_dssp TTSBCBTTTSCCCTTSCCCCCGGG-CSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCS
T ss_pred hCCcccccccCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCC
Confidence 669999999999998888 98533 2445788999999888899999999 9999999996 79999999999887876
Q ss_pred CCCeEEEEEEEeecC----------CeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceecC
Q 018781 290 ELDHGVAAVGYGKSK----------GSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLKK 350 (350)
Q Consensus 290 ~~~Hav~iVGyg~~~----------g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~~ 350 (350)
.++|||+|||||+++ +++|||||||||++|||+|||||+|+.++..+.|||+++++||++.
T Consensus 173 ~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~~ 243 (243)
T 3bwk_A 173 APNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLLE 243 (243)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC-
T ss_pred cCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEecC
Confidence 689999999999975 7899999999999999999999999976433559999999999873
No 32
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.9e-64 Score=452.65 Aligned_cols=211 Identities=44% Similarity=0.896 Sum_probs=193.6
Q ss_pred CCCeeeccCCC-CCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCCCCCCchHHHHHHHHH
Q 018781 133 LPKSVDWRKKG-AVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCNGGLMDYAFKYIVA 210 (350)
Q Consensus 133 lP~~~Dwr~~g-~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~gC~GG~~~~a~~~~~~ 210 (350)
||++||||++| +|+||||||.||||||||+++++|++++++++..++||||+|++|... .+.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999998 899999999999999999999999999999999999999999999853 4789999999999999998
Q ss_pred hCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeC-CCC
Q 018781 211 SGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTG-PCG 288 (350)
Q Consensus 211 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~-~~~ 288 (350)
++|+++|++|||......|.... .....++.+|..++..++++||++| .+|||+++++++ ++|+.|++|||.. .|.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQP-DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCCC-CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 87999999999999999998543 4556788999999888999999999 579999999997 6999999999976 454
Q ss_pred C---CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 289 A---ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 289 ~---~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
. .++|||+|||||++++++|||||||||++|||+|||||+|+. |+|||++++.||+.
T Consensus 159 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~p 218 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPIP 218 (220)
T ss_dssp CSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEE
T ss_pred CCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEee
Confidence 3 579999999999999999999999999999999999999984 58999999999985
No 33
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=5.9e-64 Score=448.91 Aligned_cols=208 Identities=44% Similarity=0.837 Sum_probs=187.0
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHh-
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVAS- 211 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~- 211 (350)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999986 47899999999999999885
Q ss_pred -CCCCCCCCCccccCCC---ccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeCC
Q 018781 212 -GGLHKEEDYPYLMEEG---TCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGP 286 (350)
Q Consensus 212 -~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~ 286 (350)
+|+++|++|||..... .|.... .....++.+|..++. ++++|+++| .+|||+++|++ ++|+.|++|||+..
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Giy~~~ 155 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSG-HTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGVMTSC 155 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSS-CCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTGGGCCSSEECSC
T ss_pred cccccccCccCCcCCCCCCCccccCC-cccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCcccCC
Confidence 5799999999987543 687433 345678899999976 799999999 57999999998 48999999999864
Q ss_pred CCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 287 CGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 287 ~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
....++|||+|||||++++++|||||||||++|||+|||||+|+. |+|||++++.||++
T Consensus 156 ~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 156 VSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp CCSCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred CCCccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 455679999999999999999999999999999999999999984 58999999999986
No 34
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=5.5e-64 Score=448.79 Aligned_cols=208 Identities=45% Similarity=0.797 Sum_probs=188.9
Q ss_pred CCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018781 133 LPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 133 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~ 212 (350)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|+||.. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999986 378999999999999999877
Q ss_pred CCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeC---CCC
Q 018781 213 GLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTG---PCG 288 (350)
Q Consensus 213 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~---~~~ 288 (350)
|+++|++|||.+....|.... ....+++.++..++. ++++||++| .+|||+++|++. .|++|++|||.. .|+
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSA-EKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSC
T ss_pred CcccccCcCcCCCCCcCCCCc-ccceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCC
Confidence 999999999999889998543 234467788888865 789999999 679999999986 599999999975 365
Q ss_pred C-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 289 A-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 289 ~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 156 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp TTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred CCcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 4 579999999999999999999999999999999999999984 58999999999986
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=8.3e-64 Score=450.23 Aligned_cols=210 Identities=33% Similarity=0.600 Sum_probs=191.6
Q ss_pred CCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHH
Q 018781 131 KALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVA 210 (350)
Q Consensus 131 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~ 210 (350)
.+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|++|.. +.||+||++..|++|+++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999996 789999999999999999
Q ss_pred hCCCCCCCCCccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHh--cCCcEEEEeec-CcccccccCCeeeC-C
Q 018781 211 SGGLHKEEDYPYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALA--HQPVSVAIEAS-GTDFQFYSGGVFTG-P 286 (350)
Q Consensus 211 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~--~GPV~v~i~~~-~~~f~~y~~Giy~~-~ 286 (350)
+ |+++|++|||.+....|. . .....+++.+|..++..++++||++|. +|||+++|.+. .++|+.|++|||.. .
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~ 162 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRD 162 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCC
T ss_pred c-CCCchhhCCCcccCCCcc-C-CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCC
Confidence 7 999999999999989998 2 345667899999998789999999994 59999999984 26899999998754 3
Q ss_pred C-CCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 287 C-GAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 287 ~-~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
+ ...++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++++.||++
T Consensus 163 ~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 163 NGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp CSSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CCCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 3 45689999999999999999999999999999999999999994 58999999999985
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=2.1e-59 Score=432.33 Aligned_cols=211 Identities=28% Similarity=0.565 Sum_probs=177.9
Q ss_pred CCCCCeeeccCC----CCCCccccCCCCcchHHHHHHHHHHHHHHHHcC--CCcccChHHhhhhcCC-CCCCCCCCchHH
Q 018781 131 KALPKSVDWRKK----GAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSG--NLTSLSEQELIDCDTS-FNNGCNGGLMDY 203 (350)
Q Consensus 131 ~~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~--~~~~lS~q~l~~c~~~-~~~gC~GG~~~~ 203 (350)
.+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||||+|+||... .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 379999999986 789999999999999999999999999999875 3689999999999853 368999999999
Q ss_pred HHHHHHHhCCCCC-------CCCCccc---------cCCCccCCC--------cc-C-------c-eeEEEeeeEecCCC
Q 018781 204 AFKYIVASGGLHK-------EEDYPYL---------MEEGTCEDK--------KE-E-------M-EVVTISGYQDVPEN 250 (350)
Q Consensus 204 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~--------~~-~-------~-~~~~i~~~~~v~~~ 250 (350)
|++|+.++ |+++ |.+|||. +..+.|... .+ . . ....+ .+..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~-~~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGY-NSYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBS-CCEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeee-eeEEeC-C
Confidence 99999886 8999 9999998 334555321 00 0 0 11122 233565 4
Q ss_pred cHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeCCCCC-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEE
Q 018781 251 DEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGPCGA-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMK 328 (350)
Q Consensus 251 ~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~ 328 (350)
++++||++| .+|||+|+|+++ ++|+.|++|||..+|+. .++|||+|||||+++|++|||||||||++|||+|||||+
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEE
Confidence 799999999 679999999997 79999999999887665 359999999999999999999999999999999999999
Q ss_pred ecCCCCCCcccccccccceec
Q 018781 329 RNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 329 ~~~~~~~~~CgI~~~~~~p~~ 349 (350)
|+. |.|||++.+++++.
T Consensus 241 rg~----n~cgI~~~~~~~~p 257 (266)
T 3cbj_A 241 RGQ----DHCGIESEVVAGIP 257 (266)
T ss_dssp CSS----CGGGTTTSCEECCB
T ss_pred cCC----CcccccCceEEEEe
Confidence 984 58999999998864
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=4.1e-59 Score=427.71 Aligned_cols=210 Identities=30% Similarity=0.587 Sum_probs=175.7
Q ss_pred CCCCeeeccCC----CCCCccccCCCCcchHHHHHHHHHHHHHHHHcC--CCcccChHHhhhhcCCCCCCCCCCchHHHH
Q 018781 132 ALPKSVDWRKK----GAVTPVKNQGSCGSCWAFSTVAAVEGINQIVSG--NLTSLSEQELIDCDTSFNNGCNGGLMDYAF 205 (350)
Q Consensus 132 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~--~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~ 205 (350)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||||+|+||....+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999997 689999999999999999999999999999976 679999999999986557899999999999
Q ss_pred HHHHHhCCCCCCCCC-------ccc---------cCCCccCCCc---------cCc----e----eEEEeeeEecCCCcH
Q 018781 206 KYIVASGGLHKEEDY-------PYL---------MEEGTCEDKK---------EEM----E----VVTISGYQDVPENDE 252 (350)
Q Consensus 206 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~~---------~~~----~----~~~i~~~~~v~~~~~ 252 (350)
+|++++ ||++|++| ||. +..+.|.... +.. . .........++ .++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 999987 89999888 996 3334453110 000 0 00011122444 379
Q ss_pred HHHHHHH-hcCCcEEEEeecCcccccccCCeeeCCCCC-CCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEec
Q 018781 253 QSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGPCGA-ELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRN 330 (350)
Q Consensus 253 ~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~ 330 (350)
++||++| .+|||+++|+++ ++|+.|++|||..++.. .++|||+|||||++++++|||||||||++|||+|||||+|+
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~rg 238 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIVRG 238 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECS
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEEcC
Confidence 9999999 679999999997 79999999999886654 45999999999999999999999999999999999999998
Q ss_pred CCCCCCccccccccccee
Q 018781 331 TGKPEGLCGINKMASIPL 348 (350)
Q Consensus 331 ~~~~~~~CgI~~~~~~p~ 348 (350)
. |+|||++.++..+
T Consensus 239 ~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 239 R----DECSIESEVTAGR 252 (254)
T ss_dssp S----CGGGTTSSEEEEE
T ss_pred C----CeecCCCceEeec
Confidence 5 5899999987654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=9.3e-59 Score=429.76 Aligned_cols=215 Identities=29% Similarity=0.564 Sum_probs=184.6
Q ss_pred ccCCCCCeeeccCC---CCCCccccCC---CCcchHHHHHHHHHHHHHHHHcC-C--CcccChHHhhhhcCCCCCCCCCC
Q 018781 129 DVKALPKSVDWRKK---GAVTPVKNQG---SCGSCWAFSTVAAVEGINQIVSG-N--LTSLSEQELIDCDTSFNNGCNGG 199 (350)
Q Consensus 129 ~~~~lP~~~Dwr~~---g~v~pV~dQg---~cGsCwAfA~~~~lE~~~~~~~~-~--~~~lS~q~l~~c~~~~~~gC~GG 199 (350)
...+||++||||++ ++++|||||| .||||||||++++||++++++++ . .++||+|+|+||.. ..||+||
T Consensus 32 ~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG 109 (277)
T 1deu_A 32 SPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGG 109 (277)
T ss_dssp CGGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEE
T ss_pred ccccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCC
Confidence 34579999999998 6899999999 99999999999999999999875 3 47999999999985 4799999
Q ss_pred chHHHHHHHHHhCCCCCCCCCccccCCCccCC-Cc-------------cCceeEEEeeeEecCCCcHHHHHHHH-hcCCc
Q 018781 200 LMDYAFKYIVASGGLHKEEDYPYLMEEGTCED-KK-------------EEMEVVTISGYQDVPENDEQSLLKAL-AHQPV 264 (350)
Q Consensus 200 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~-~~-------------~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV 264 (350)
++..|++|+.++ ||++|++|||...+..|.. .. .....+++..|..++ ++++||++| .+|||
T Consensus 110 ~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV 186 (277)
T 1deu_A 110 NDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPI 186 (277)
T ss_dssp CHHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCE
T ss_pred CHHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCE
Confidence 999999999886 8999999999998888872 11 011345677787774 488899998 67999
Q ss_pred EEEEeecCcccccccCCeeeCCC-CCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEecCC----CCCCccc
Q 018781 265 SVAIEASGTDFQFYSGGVFTGPC-GAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKRNTG----KPEGLCG 339 (350)
Q Consensus 265 ~v~i~~~~~~f~~y~~Giy~~~~-~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~----~~~~~Cg 339 (350)
+++|+++ ++|+.|++|||..++ ...++|||+|||||+++|++|||||||||++|||+|||||+|+.+ .....||
T Consensus 187 ~v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cg 265 (277)
T 1deu_A 187 SCGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLA 265 (277)
T ss_dssp EEEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTT
T ss_pred EEEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccce
Confidence 9999997 789999999998754 456899999999999999999999999999999999999999964 0011799
Q ss_pred ccccccceec
Q 018781 340 INKMASIPLK 349 (350)
Q Consensus 340 I~~~~~~p~~ 349 (350)
|+++++|++.
T Consensus 266 Ie~~~~~~~p 275 (277)
T 1deu_A 266 IEEHCTFGDP 275 (277)
T ss_dssp TTSCEEEEEE
T ss_pred eccccEeecc
Confidence 9999999874
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=2e-53 Score=392.45 Aligned_cols=209 Identities=25% Similarity=0.495 Sum_probs=164.9
Q ss_pred CeeeccCC-CCCC--ccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-CCCCCCCCc-hHHHHHHHH
Q 018781 135 KSVDWRKK-GAVT--PVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-FNNGCNGGL-MDYAFKYIV 209 (350)
Q Consensus 135 ~~~Dwr~~-g~v~--pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-~~~gC~GG~-~~~a~~~~~ 209 (350)
...|||++ |+++ ||||||.||||||||++++||++++++++..+.||||+|+||+.. .+.||+||. +..++.++.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 46899998 6877 999999999999999999999999999889999999999999864 478999996 445567887
Q ss_pred HhCCCCCCCCCccccC--CCccCCCcc----------------CceeEEEeeeEecCC----Cc----HHHHHHHH-hcC
Q 018781 210 ASGGLHKEEDYPYLME--EGTCEDKKE----------------EMEVVTISGYQDVPE----ND----EQSLLKAL-AHQ 262 (350)
Q Consensus 210 ~~~Gi~~e~~yPY~~~--~~~c~~~~~----------------~~~~~~i~~~~~v~~----~~----~~~i~~al-~~G 262 (350)
+++||++|++|||... ...|+.... .....++.+|..++. .+ +++||++| .+|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 8866999999999863 467864321 012235667766654 13 47899999 579
Q ss_pred CcEEEEeecCccccccc-CCee-eCCCCC-CCCeEEEEEEEeec---CC--eeEEEEEcCCCCCCCCCceEEEEecCCCC
Q 018781 263 PVSVAIEASGTDFQFYS-GGVF-TGPCGA-ELDHGVAAVGYGKS---KG--SDYIIVKNSWGPKWGERGYIRMKRNTGKP 334 (350)
Q Consensus 263 PV~v~i~~~~~~f~~y~-~Giy-~~~~~~-~~~Hav~iVGyg~~---~g--~~ywivkNSWG~~WG~~GY~~i~~~~~~~ 334 (350)
||+++|++. +|+.|+ +|++ ...|+. .++|||+|||||++ +| ++|||||||||++|||+|||||+|+.
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g--- 243 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYG--- 243 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSC---
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecC---
Confidence 999999985 577774 4433 335764 68999999999985 55 68999999999999999999999853
Q ss_pred CCcccccc---ccccee
Q 018781 335 EGLCGINK---MASIPL 348 (350)
Q Consensus 335 ~~~CgI~~---~~~~p~ 348 (350)
.|+|||+. .+.||+
T Consensus 244 ~n~Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 244 PTHCHFNFIHSVVIFNV 260 (265)
T ss_dssp CTTCSSCSCCEEEEECE
T ss_pred CCccCcceeEEEEeccc
Confidence 35899555 555554
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=7.1e-52 Score=386.68 Aligned_cols=234 Identities=24% Similarity=0.266 Sum_probs=175.6
Q ss_pred cEEEEcccCCCCChHhHhhhhcCCCCCCCCCCCCCCcccccccCCCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHH
Q 018781 88 SYWLGLNEFADMSHEEFKNKYLGLKPQFPTRRQPSAEFSYRDVKALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVE 167 (350)
Q Consensus 88 s~~~g~N~fsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE 167 (350)
...-.+|++.++..|.++..+ +..++.+...+...........+||++||||+++ ||||||.||||||||+++++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~l-G~~p~~~d~rd~~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~alE 88 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSGY-GYIPDIADIRDFSYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAIQ 88 (291)
T ss_dssp ----------CCCCCCCCTTC-CEECCCCCTTCCBCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHHH
T ss_pred CcccchhhHhHhhhccccccC-CCCCCCCcccccccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHHHH
Confidence 344577899999999987654 5555443222211100111124799999999983 999999999999999999999
Q ss_pred HHHHHHcCCCcccChHHhh--hhcCC--CC-CCCCCCchHHHHHHHHHhCCCCCCCCCccccCC---CccCCC-------
Q 018781 168 GINQIVSGNLTSLSEQELI--DCDTS--FN-NGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEE---GTCEDK------- 232 (350)
Q Consensus 168 ~~~~~~~~~~~~lS~q~l~--~c~~~--~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~------- 232 (350)
++++ +++..+.||+|+|+ +|... .+ .+|.||++..|++|++++ ||++|++|||.+.+ ..|...
T Consensus 89 ~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~ 166 (291)
T 3ois_A 89 FERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPASK 166 (291)
T ss_dssp HHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGGGS
T ss_pred HHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccccC
Confidence 9876 46777899999998 67631 23 458899999999999987 99999999998863 345431
Q ss_pred c------cCceeEEEeeeEecCCCcHHHHHHHHh-cCCcEEEEeecCcccccccC--CeeeCC-CCC--CCCeEEEEEEE
Q 018781 233 K------EEMEVVTISGYQDVPENDEQSLLKALA-HQPVSVAIEASGTDFQFYSG--GVFTGP-CGA--ELDHGVAAVGY 300 (350)
Q Consensus 233 ~------~~~~~~~i~~~~~v~~~~~~~i~~al~-~GPV~v~i~~~~~~f~~y~~--Giy~~~-~~~--~~~Hav~iVGy 300 (350)
. .....+++.+|..++. ++++|+++|+ +|||+++|+++ ++|+.|++ |||..+ |.. .++|||+||||
T Consensus 167 ~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVGy 244 (291)
T 3ois_A 167 KPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVGY 244 (291)
T ss_dssp CCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEEE
T ss_pred CCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEEEE
Confidence 0 0123467889999976 8999999994 68999999998 79999998 999875 332 25899999999
Q ss_pred eecCCeeEEEEEcCCCCCCCCCceEEEEecC
Q 018781 301 GKSKGSDYIIVKNSWGPKWGERGYIRMKRNT 331 (350)
Q Consensus 301 g~~~g~~ywivkNSWG~~WG~~GY~~i~~~~ 331 (350)
|+ +++|||||||||++|||+|||||+|+.
T Consensus 245 ~~--~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 245 DD--EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp ET--TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred eC--CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 84 568999999999999999999999984
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.5e-40 Score=322.33 Aligned_cols=196 Identities=17% Similarity=0.255 Sum_probs=151.0
Q ss_pred CCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHH-cCCCcccCh----------------HHhhhhcCC---
Q 018781 132 ALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIV-SGNLTSLSE----------------QELIDCDTS--- 191 (350)
Q Consensus 132 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~-~~~~~~lS~----------------q~l~~c~~~--- 191 (350)
..|..|+++....++||+|||+||+|||||+++++|+.++++ +++.+.||+ |+++||...
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457788888887899999999999999999999999999998 578899999 999999743
Q ss_pred ----------CCCCCCCCchHHHHHHHHHhCCCCCCCCCccccCC---------------------------C------c
Q 018781 192 ----------FNNGCNGGLMDYAFKYIVASGGLHKEEDYPYLMEE---------------------------G------T 228 (350)
Q Consensus 192 ----------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 228 (350)
.+.||+||....++.++.+. |++++++|||.... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 36899999999999999876 99999999997631 1 1
Q ss_pred ----------------c----------CCCccC----------c-------eeE--EEeeeE------------------
Q 018781 229 ----------------C----------EDKKEE----------M-------EVV--TISGYQ------------------ 245 (350)
Q Consensus 229 ----------------c----------~~~~~~----------~-------~~~--~i~~~~------------------ 245 (350)
| ...+.. + ... .+.+|.
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 110000 0 000 222222
Q ss_pred ---------------ecCCCcH-HHHHHHHh-cCCcEEEEeecCcccccccCCeeeCCC---------------------
Q 018781 246 ---------------DVPENDE-QSLLKALA-HQPVSVAIEASGTDFQFYSGGVFTGPC--------------------- 287 (350)
Q Consensus 246 ---------------~v~~~~~-~~i~~al~-~GPV~v~i~~~~~~f~~y~~Giy~~~~--------------------- 287 (350)
++|..+. +.++.+|+ .|||.+++++. .+.++++|||+.+|
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~--~~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVG--KHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeC--hhhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 3332222 34456775 58999999997 34556999998754
Q ss_pred --CCCCCeEEEEEEEe--ec-CCe-eEEEEEcCCCCCCCCCceEEEEec
Q 018781 288 --GAELDHGVAAVGYG--KS-KGS-DYIIVKNSWGPKWGERGYIRMKRN 330 (350)
Q Consensus 288 --~~~~~Hav~iVGyg--~~-~g~-~ywivkNSWG~~WG~~GY~~i~~~ 330 (350)
.+..+|||+||||| .+ +|+ +|||||||||++||++|||+|+++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 23579999999999 64 677 999999999999999999999985
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=6.7e-40 Score=318.13 Aligned_cols=207 Identities=17% Similarity=0.191 Sum_probs=144.9
Q ss_pred CCCCeeeccCCCCCCccccCCCCcchHHHHHHHHHHHHHHHH-cCCCcccCh----------------HHhhhhcCC---
Q 018781 132 ALPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIV-SGNLTSLSE----------------QELIDCDTS--- 191 (350)
Q Consensus 132 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~-~~~~~~lS~----------------q~l~~c~~~--- 191 (350)
..|..|+++..+.++||+|||+||+|||||+++++|+.++++ +++.++||+ |+|+||...
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 457788888888899999999999999999999999999998 788899999 778999752
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCCCCCCCCcc-ccC---------------------------------C---
Q 018781 192 --------FNNGCNGGLMDYAFKYIVASGGLHKEEDYPY-LME---------------------------------E--- 226 (350)
Q Consensus 192 --------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 226 (350)
.+.||+||.+..++.++.++ |++++++||| ... .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 37899999999999999876 9999999999 310 0
Q ss_pred ------------------CccCC----Cc----------------cC------------c--------------eeEEEe
Q 018781 227 ------------------GTCED----KK----------------EE------------M--------------EVVTIS 242 (350)
Q Consensus 227 ------------------~~c~~----~~----------------~~------------~--------------~~~~i~ 242 (350)
+.|.. .- .+ . ..+.+.
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 01111 00 00 0 000000
Q ss_pred -----------eeEecCCCcH-HHHHHHHh-cCCcEEEEeecCcccccccCCeeeCCC---------------------C
Q 018781 243 -----------GYQDVPENDE-QSLLKALA-HQPVSVAIEASGTDFQFYSGGVFTGPC---------------------G 288 (350)
Q Consensus 243 -----------~~~~v~~~~~-~~i~~al~-~GPV~v~i~~~~~~f~~y~~Giy~~~~---------------------~ 288 (350)
.|.++|.... +.++.+|+ .|||.+++++. .+.+|++|||+.+| .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 1334433111 44556674 58999999996 47788999997654 2
Q ss_pred CCCCeEEEEEEEeec-CCe--eEEEEEcCCCCCCCCCceEEEEecCCCCCCcccccccccceec
Q 018781 289 AELDHGVAAVGYGKS-KGS--DYIIVKNSWGPKWGERGYIRMKRNTGKPEGLCGINKMASIPLK 349 (350)
Q Consensus 289 ~~~~Hav~iVGyg~~-~g~--~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~CgI~~~~~~p~~ 349 (350)
+..+|||+|||||.+ +|+ +|||||||||++||++||++|+++ .|+.++.++++
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~ivV 424 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIVV 424 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEEE
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEEe
Confidence 457999999999985 787 899999999999999999999985 46565555543
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=8.2e-35 Score=276.71 Aligned_cols=181 Identities=22% Similarity=0.309 Sum_probs=134.4
Q ss_pred CCCccccCCCCcchHHHHHHHHHHHHHHHHcCCCcccChHHhhhhcCC-----------CCCCCCCCchHHHHHHHHHhC
Q 018781 144 AVTPVKNQGSCGSCWAFSTVAAVEGINQIVSGNLTSLSEQELIDCDTS-----------FNNGCNGGLMDYAFKYIVASG 212 (350)
Q Consensus 144 ~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~~c~~~-----------~~~gC~GG~~~~a~~~~~~~~ 212 (350)
.++||+|||+||||||||+++++|+.+++++++.+.||+|+|++|+.. .+.||+||.+..|++|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 479999999999999999999999999999999999999999999741 25799999999999999887
Q ss_pred CCCCCCCCc------cccCCC--------------cc---CCC------cc-----------------------------
Q 018781 213 GLHKEEDYP------YLMEEG--------------TC---EDK------KE----------------------------- 234 (350)
Q Consensus 213 Gi~~e~~yP------Y~~~~~--------------~c---~~~------~~----------------------------- 234 (350)
||+++++|| +...+. .. +.- ..
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 211000 00 000 00
Q ss_pred -----------CceeEEEee----------------------eEecCCCcHHHHHHH----HhcC-CcEEEEeecCcccc
Q 018781 235 -----------EMEVVTISG----------------------YQDVPENDEQSLLKA----LAHQ-PVSVAIEASGTDFQ 276 (350)
Q Consensus 235 -----------~~~~~~i~~----------------------~~~v~~~~~~~i~~a----l~~G-PV~v~i~~~~~~f~ 276 (350)
....+.+.+ |.++ .++.|+++ |..| ||..+-+|....|.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nv---p~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNL---PLDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEEC---CHHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCc---CHHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 000111111 1122 24555554 5566 99999999844555
Q ss_pred cccCCeeeCCC-----------------------------------------------CCCCCeEEEEEEEee-cCCeeE
Q 018781 277 FYSGGVFTGPC-----------------------------------------------GAELDHGVAAVGYGK-SKGSDY 308 (350)
Q Consensus 277 ~y~~Giy~~~~-----------------------------------------------~~~~~Hav~iVGyg~-~~g~~y 308 (350)
+.||...+. .+..+|||+|||||. ++|++|
T Consensus 257 --~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~y 334 (383)
T 3pw3_A 257 --RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEY 334 (383)
T ss_dssp --TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEE
T ss_pred --CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceE
Confidence 788873210 123479999999997 678899
Q ss_pred EEEEcCCCCCCCCCceEEEEec
Q 018781 309 IIVKNSWGPKWGERGYIRMKRN 330 (350)
Q Consensus 309 wivkNSWG~~WG~~GY~~i~~~ 330 (350)
||||||||++||++||++|+++
T Consensus 335 w~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 335 YMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEeCCCCCCCcCCeEEecHH
Confidence 9999999999999999999975
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.77 E-value=8.5e-19 Score=137.37 Aligned_cols=76 Identities=38% Similarity=0.604 Sum_probs=69.6
Q ss_pred CChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcccCCCCChHhHhhhhcCCCCC
Q 018781 39 TSMDKLIELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKEVTSYWLGLNEFADMSHEEFKNKYLGLKPQ 114 (350)
Q Consensus 39 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsDlt~~E~~~~~~~~~~~ 114 (350)
.++.++..+|++||++|+|.|.+.+|+..|+.||.+|++.|++||+++.+|++|+|+|+|||.+||++.+++.+..
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 4567888999999999999999988999999999999999999999888999999999999999999998876543
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.70 E-value=1.8e-17 Score=124.03 Aligned_cols=66 Identities=30% Similarity=0.538 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccC----CCcEEEEcccCCCCChHhHhhhhcCCC
Q 018781 45 IELFESWMSKHGKTYKCIEEKLHRFEIFKENLKHIDQRNKE----VTSYWLGLNEFADMSHEEFKNKYLGLK 112 (350)
Q Consensus 45 ~~~f~~~~~~~~k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsDlt~~E~~~~~~~~~ 112 (350)
...|++||.+|+|.|.+.+|+..| .||.+|++.|++||+. ..+|++|+|+|+|||.+|| +.+++.+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 358999999999999888899999 9999999999999985 2689999999999999999 8887754
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.71 E-value=0.0011 Score=55.40 Aligned_cols=129 Identities=16% Similarity=0.213 Sum_probs=86.3
Q ss_pred ccCCCCcchHHHHHHHHHHHHHHH--------HcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 018781 149 KNQGSCGSCWAFSTVAAVEGINQI--------VSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDY 220 (350)
Q Consensus 149 ~dQg~cGsCwAfA~~~~lE~~~~~--------~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 220 (350)
..||.-+-|-+|+.++.|-+.... .......+|+++|.+ .|..+...++|.+..+ -.
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~---------t~~~~~q~Iky~~s~G-~~----- 89 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN---------CATFPNQMIEYGKSQG-RD----- 89 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG---------CCBCHHHHHHHHHHTT-CC-----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh---------cCCCHHHHHHHHHHcC-cC-----
Confidence 459999999999999988765421 111235677777766 3456889999987542 11
Q ss_pred ccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEE
Q 018781 221 PYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVG 299 (350)
Q Consensus 221 PY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 299 (350)
.. +. .+. -+.+++++.+ .+-||.+...-. +........+||++|||
T Consensus 90 ---------------~~-~~----nr~--ls~neV~~~i~~Nk~I~v~~~~v-----------~e~~~~~~~gHA~av~G 136 (183)
T 1pxv_A 90 ---------------IH-YQ----EGV--PSYNQVDQLTKDNVGIMILAQSV-----------SQNPNDPHLGHALAVVG 136 (183)
T ss_dssp ---------------CE-EE----ESC--CCHHHHHHHHHTTCCEEEEEECC-----------CSSTTSCCCEEEEEEEE
T ss_pred ---------------hh-Hh----cCC--CCHHHHHHHHhcCCcEEEEcccc-----------ccCCCCccCceeEEEEe
Confidence 00 00 112 2578889999 556887765422 11223345789999999
Q ss_pred EeecCCeeEEEEEcCCCCCCCCCceEEEEec
Q 018781 300 YGKSKGSDYIIVKNSWGPKWGERGYIRMKRN 330 (350)
Q Consensus 300 yg~~~g~~ywivkNSWG~~WG~~GY~~i~~~ 330 (350)
|-..++.++.+|=|=| ++|++-++.+
T Consensus 137 ya~~~~~~~y~~WNPW-----~~~~~~~~a~ 162 (183)
T 1pxv_A 137 NAKINDQEKLIYWNPW-----DTELSIQDAD 162 (183)
T ss_dssp EEEETTEEEEEEECTT-----CSSCEEEETT
T ss_pred eeecCCCeEEEEeCCc-----cCCcEeecCC
Confidence 9997788999997777 3477777754
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.47 E-value=0.0027 Score=58.46 Aligned_cols=129 Identities=19% Similarity=0.277 Sum_probs=84.3
Q ss_pred ccCCCCcchHHHHHHHHHHHHHHH--------HcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 018781 149 KNQGSCGSCWAFSTVAAVEGINQI--------VSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDY 220 (350)
Q Consensus 149 ~dQg~cGsCwAfA~~~~lE~~~~~--------~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 220 (350)
..||.-+-|-+||.+++|-+.... .+.-...+|+++|.++ |..+...++|++..+ .
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qsyG-~------ 264 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQG-R------ 264 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHHTT-E------
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHhC-c------
Confidence 469999999999999988764311 1112356777777663 456888999987542 1
Q ss_pred ccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHH-hcCCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEE
Q 018781 221 PYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKAL-AHQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVG 299 (350)
Q Consensus 221 PY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al-~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 299 (350)
.+.-....+ +.+.+++.+ .+-||.+......+. ..+...+|||+|||
T Consensus 265 -------------------~~~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvG 312 (367)
T 1x9y_A 265 -------------------DIHYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVG 312 (367)
T ss_dssp -------------------EEEEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEE
T ss_pred -------------------chhhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEe
Confidence 111111222 578888888 567998877654111 12235689999999
Q ss_pred EeecCCeeEEEEEcCCCCCCCCCceEEEEec
Q 018781 300 YGKSKGSDYIIVKNSWGPKWGERGYIRMKRN 330 (350)
Q Consensus 300 yg~~~g~~ywivkNSWG~~WG~~GY~~i~~~ 330 (350)
|...++.+|.++=|=| |. +++-++-.
T Consensus 313 yA~~~~~~~y~~WNPW---~~--~~~~~sa~ 338 (367)
T 1x9y_A 313 NAKINDQEKLIYWNPW---DT--ELSIQDAD 338 (367)
T ss_dssp EEEETTEEEEEEECTT---CS--SCEEEETT
T ss_pred ccccCCCcEEEEecCc---cC--CceeecCC
Confidence 9876688999997766 43 36666553
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.19 E-value=0.0057 Score=50.91 Aligned_cols=128 Identities=16% Similarity=0.226 Sum_probs=83.3
Q ss_pred ccCCCCcchHHHHHHHHHHHHHHH--------HcCCCcccChHHhhhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 018781 149 KNQGSCGSCWAFSTVAAVEGINQI--------VSGNLTSLSEQELIDCDTSFNNGCNGGLMDYAFKYIVASGGLHKEEDY 220 (350)
Q Consensus 149 ~dQg~cGsCwAfA~~~~lE~~~~~--------~~~~~~~lS~q~l~~c~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 220 (350)
..||.-+-|-+||.+++|-+.... .+.-...+|+++|..+. ..+.+.++|.+..+ --
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~---------~t~~e~iky~~s~g-~~----- 80 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG---------LTPREMIYFGQTQG-RS----- 80 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC---------CCHHHHHHHHHHTT-CC-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC---------CCHHHHHHHHHHcC-CC-----
Confidence 459999999999999998765421 11123678899988544 35788899987653 10
Q ss_pred ccccCCCccCCCccCceeEEEeeeEecCCCcHHHHHHHHh-cCCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEE
Q 018781 221 PYLMEEGTCEDKKEEMEVVTISGYQDVPENDEQSLLKALA-HQPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVG 299 (350)
Q Consensus 221 PY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~al~-~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 299 (350)
. . +..- .-+.+++++.+. +-|+.+..+-. + .. .....+||++|||
T Consensus 81 ------------~---~------~~n~-~ls~~eV~~~~~~nk~i~i~~~~v-e----~~-------~~~~~gHAlav~G 126 (174)
T 1cv8_A 81 ------------P---Q------LLNR-MTTYNEVDNLTKNNKGIAILGSRV-E----SR-------NGMHAGHAMAVVG 126 (174)
T ss_dssp ------------C---E------EESS-CCCHHHHHHHHHTTCCEEEEEEES-S----CB-------TTBCCEEEEEEEE
T ss_pred ------------h---h------hhcC-CCCHHHHHHHHhcCCceEEEcccc-c----CC-------CCCCCceeEEEEe
Confidence 0 0 0000 125788889885 45887765532 1 11 1235689999999
Q ss_pred Eee-cCCeeEEEEEcCCCCCCCCCceEEEEec
Q 018781 300 YGK-SKGSDYIIVKNSWGPKWGERGYIRMKRN 330 (350)
Q Consensus 300 yg~-~~g~~ywivkNSWG~~WG~~GY~~i~~~ 330 (350)
|-. .+|.+|.++=|=| +++.+-++-+
T Consensus 127 y~~~~ng~~~y~~WNPW-----~~~~~~~s~~ 153 (174)
T 1cv8_A 127 NAKLNNGQEVIIIWNPW-----DNGFMTQDAK 153 (174)
T ss_dssp EEEETTSCEEEEEECTT-----CSSCEEEETT
T ss_pred eeeecCCceEEEEeCCc-----cCCcEEecCC
Confidence 998 5678999998877 3445544443
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=91.19 E-value=0.63 Score=41.03 Aligned_cols=63 Identities=19% Similarity=0.378 Sum_probs=37.9
Q ss_pred ecCCCcHHHHHHHHhcC-CcEEEEeecCc-----ccccc--cCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCC
Q 018781 246 DVPENDEQSLLKALAHQ-PVSVAIEASGT-----DFQFY--SGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSW 315 (350)
Q Consensus 246 ~v~~~~~~~i~~al~~G-PV~v~i~~~~~-----~f~~y--~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSW 315 (350)
.++..+.++|++.|.+| ||+|..+..-. .|..+ .+|-..- ...+|+|+|+||++. ..+|-+.+
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~~----~vyi~DP~ 196 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQE----SVYIRDPL 196 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECSS----EEEEECTT
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeCC----EEEEECCC
Confidence 34455899999999877 99987654211 12211 1232111 234799999999862 34455554
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=50.81 E-value=27 Score=31.90 Aligned_cols=59 Identities=19% Similarity=0.403 Sum_probs=36.7
Q ss_pred HHHHHHHhc-CCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEe
Q 018781 253 QSLLKALAH-QPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKR 329 (350)
Q Consensus 253 ~~i~~al~~-GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~ 329 (350)
+.|++.|.+ .||.+.-.- ... . +..++||.+|=||..+ +||-|==.||-. .+|||.+.-
T Consensus 239 ~~i~~eL~~~rPV~~~G~~--~~~------~-----~~~~GHafV~DGY~~~---~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS--PGS------M-----GQDAGHAFVIDGYNKA---GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT---SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEec--CCC------C-----CCCCceEEEEccccCC---CeEEEecCCCCC--CCceEeccC
Confidence 467888854 598764321 111 0 1346899999999864 678775455521 389999864
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=48.29 E-value=33 Score=32.02 Aligned_cols=55 Identities=24% Similarity=0.362 Sum_probs=36.5
Q ss_pred HHHHHHHHhc-CCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEe
Q 018781 252 EQSLLKALAH-QPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKR 329 (350)
Q Consensus 252 ~~~i~~al~~-GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~ 329 (350)
.+.|++.|.+ .||.+.-.-. .++||.+|=||+.+ +||-|==.||-. .+|||.+.-
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~~---~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADGR---NFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECSS---SEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccCC---CeEEEEeCcCCC--CCcceeccC
Confidence 3567788854 5987643210 15899999999853 677775444422 489999864
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=43.04 E-value=36 Score=30.09 Aligned_cols=55 Identities=24% Similarity=0.349 Sum_probs=37.0
Q ss_pred HHHHHHHHhc-CCcEEEEeecCcccccccCCeeeCCCCCCCCeEEEEEEEeecCCeeEEEEEcCCCCCCCCCceEEEEe
Q 018781 252 EQSLLKALAH-QPVSVAIEASGTDFQFYSGGVFTGPCGAELDHGVAAVGYGKSKGSDYIIVKNSWGPKWGERGYIRMKR 329 (350)
Q Consensus 252 ~~~i~~al~~-GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~GY~~i~~ 329 (350)
.+.|++.|.. .||.+.-.- +.++||.+|=||..+ +|+-|-=.||- -.+|||.+..
T Consensus 171 ~~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~---~~~H~NwGWgG--~~nGYy~l~~ 226 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVNWGWGG--VSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS---SCEEEECSSTT--TTCEEECTTC
T ss_pred HHHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC---CEEEEEcCCCC--CCCceeeccc
Confidence 4677888854 598876421 135899999999853 57776434441 1489999864
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=33.68 E-value=39 Score=31.05 Aligned_cols=28 Identities=18% Similarity=0.382 Sum_probs=21.8
Q ss_pred CCCeEEEEEEEeec----CCeeEEEEEcCCCC
Q 018781 290 ELDHGVAAVGYGKS----KGSDYIIVKNSWGP 317 (350)
Q Consensus 290 ~~~Hav~iVGyg~~----~g~~ywivkNSWG~ 317 (350)
..+||-.|++.... .+.....|||-||.
T Consensus 244 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 244 VRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE 275 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred cCCceEEEeEEEEEecCCCceEEEEEeCCCCC
Confidence 34899999998752 23578899999995
No 54
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.16.1 PDB: 3pcq_F*
Probab=31.80 E-value=20 Score=29.23 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHhh
Q 018781 6 HSKLLLLSLSLSLFACS 22 (350)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (350)
||+++.+++++++++..
T Consensus 1 Mrrl~~~~l~~~~~~~~ 17 (164)
T 1jb0_F 1 MRRFLALLLVLTLWLGF 17 (164)
T ss_dssp -----------------
T ss_pred CchHHHHHHHHHHHHcc
Confidence 78886666655544433
No 55
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=31.53 E-value=45 Score=30.61 Aligned_cols=28 Identities=21% Similarity=0.501 Sum_probs=22.2
Q ss_pred CCCeEEEEEEEeec----CCeeEEEEEcCCCC
Q 018781 290 ELDHGVAAVGYGKS----KGSDYIIVKNSWGP 317 (350)
Q Consensus 290 ~~~Hav~iVGyg~~----~g~~ywivkNSWG~ 317 (350)
..+||-.|++.... .+.....|||-||.
T Consensus 243 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 243 IKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred ccCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 34899999998753 34678899999996
No 56
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=29.56 E-value=49 Score=30.15 Aligned_cols=39 Identities=26% Similarity=0.569 Sum_probs=0.0
Q ss_pred CeEEEEEEEeec----CCeeEEEEEcCCC-CCCC-------------------------CCceEEEEec
Q 018781 292 DHGVAAVGYGKS----KGSDYIIVKNSWG-PKWG-------------------------ERGYIRMKRN 330 (350)
Q Consensus 292 ~Hav~iVGyg~~----~g~~ywivkNSWG-~~WG-------------------------~~GY~~i~~~ 330 (350)
+||-.|++.... .+...-.+||-|| ..|- ++|-|||+..
T Consensus 241 ~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~ 309 (326)
T 2nqa_A 241 SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLS 309 (326)
T ss_dssp SCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHH
T ss_pred CceEEEEEEEEEecCCCceEEEEecCCCcCccccCCCCCCCccccccCHHHHHHhCCCCCCCEEEEEHH
No 57
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=22.77 E-value=18 Score=28.26 Aligned_cols=8 Identities=25% Similarity=0.143 Sum_probs=0.0
Q ss_pred hhHHHHHH
Q 018781 6 HSKLLLLS 13 (350)
Q Consensus 6 ~~~~~~~~ 13 (350)
|||.|+++
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 78844333
No 58
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=22.27 E-value=35 Score=23.94 Aligned_cols=27 Identities=15% Similarity=0.064 Sum_probs=20.1
Q ss_pred CCccccCCCCcchHHHHHHHHHHHHHHHH
Q 018781 145 VTPVKNQGSCGSCWAFSTVAAVEGINQIV 173 (350)
Q Consensus 145 v~pV~dQg~cGsCwAfA~~~~lE~~~~~~ 173 (350)
+--|+=||.|++| ......+|..++..
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREK 63 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHH
Confidence 4467889999999 34556888877653
No 59
>2z79_A Endo-1,4-beta-xylanase A; glycoside hydrolase, glycosidase, xylan degradatio hydrolase; 1.30A {Bacillus subtilis} PDB: 2qz3_A 2dcy_A* 1xxn_A* 1bcx_A* 1xnb_A 1bvv_A 2b42_B 3hd8_B 1hv0_A 2bvv_A 1c5h_A 1c5i_A 1hv1_A 1xnc_A 2dcz_A 3exu_A* 2b46_X* 2b45_X*
Probab=20.66 E-value=70 Score=26.62 Aligned_cols=28 Identities=25% Similarity=0.434 Sum_probs=23.4
Q ss_pred CCeEEEEEEEeecCCeeEEEEEcCCCCCC
Q 018781 291 LDHGVAAVGYGKSKGSDYIIVKNSWGPKW 319 (350)
Q Consensus 291 ~~Hav~iVGyg~~~g~~ywivkNSWG~~W 319 (350)
++--+.|-||-..+-.+|.||. +||+..
T Consensus 62 Gn~yl~vYGWt~nPlvEYYIve-~~g~~~ 89 (185)
T 2z79_A 62 GNGYLTLYGWTRSPLIEYYVVD-SWGTYR 89 (185)
T ss_dssp SSEEEEEEEEEETTTEEEEEEE-EESSCC
T ss_pred CCEEEEEEecCCCCcEEEEEEe-eecccC
Confidence 4667999999998889999997 788644
No 60
>3nb3_A Outer membrane protein A; virus assembly, cementing protein, bacteriophage, SF6, shige beta-barrel, icosahedral, virus; 19.00A {Escherichia coli}
Probab=20.37 E-value=23 Score=32.14 Aligned_cols=13 Identities=8% Similarity=-0.187 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHH
Q 018781 6 HSKLLLLSLSLSL 18 (350)
Q Consensus 6 ~~~~~~~~~~~~~ 18 (350)
|||++++++++++
T Consensus 1 MKk~ll~~a~~~~ 13 (346)
T 3nb3_A 1 MKKTAIAIAVALA 13 (346)
T ss_dssp -------------
T ss_pred CchhHHHHHHHHH
Confidence 8988766555443
Done!