BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018782
(350 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/350 (72%), Positives = 296/350 (84%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M EFG++PS+ DLD+LL+ LCK KHVK A QFFD KH+F KTYSILVRG GD+GE
Sbjct: 174 MAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEA 233
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EARK+FDEM R C +D+LA+NSLLEA+CK GN+DEA+ M RE+ S G EPDA SY+IF
Sbjct: 234 VEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIF 293
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A+CEAN+IHSVF VLD MKRY+LVPNVFTYNCII+KLCKN KVE+AYQLL EM+ERG
Sbjct: 294 IRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGV 353
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD WSYN ILAYHC+ +EVN A +LI+ M K+N +PDRH+YNM+LKLLVRVGRFDRATE
Sbjct: 354 SPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATE 413
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+WESM +RGFYPSVSTYSVM+HGLCKKKGKLEEAC+YFE M+DEGIPPY+ST+EMLRNRL
Sbjct: 414 IWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRL 473
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+G G LD IEILA KMER TSC+IQELA MRG +SR+EETELES+
Sbjct: 474 IGFGLLDHIEILACKMERGTSCSIQELAKEMRGNKACVRSRNEETELESE 523
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE------------ 166
+ ++ AN R D M + L P+V + ++ LCK + V+
Sbjct: 153 LVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK 212
Query: 167 ----------------------EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
EA ++ DEM RG D +YN++L C V+ A
Sbjct: 213 FEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAY 272
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ + V PD +Y + ++ V + M++ P+V TY+ ++ L
Sbjct: 273 KMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKL 332
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K GK+E+A + M++ G+ P
Sbjct: 333 C-KNGKVEDAYQLLHEMMERGVSP 355
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/350 (70%), Positives = 291/350 (83%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG+K + D+DQLL+ LCKRKHVK A +FFD E P KTYSIL+RG GDVG+
Sbjct: 176 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDS 235
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEARKLF+EM ER C VD++A+NSLLEA+CK GN+DEA+ + REM S G PDA SYSIF
Sbjct: 236 SEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIF 295
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A+CE NDIHS F+VLD M+RYNLVPNVFTYNCI++KLCK+EKV+EAYQLLDEMIERG
Sbjct: 296 IRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGV 355
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD WSYNAI A+HCD EVN ALRLI+RM KEN MPDRHTYNMVLK+L+RVGRFDR T+
Sbjct: 356 SPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTD 415
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW ME+RGFYP+ STY+VMVHG CKKKGKLEEACKYFEMM+D+GIPPYS TVE+LRNR+
Sbjct: 416 VWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRV 475
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+GLGF + I++LA KMERSTSC IQEL++ MRG+ + RSEE L S+
Sbjct: 476 IGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQNLPSE 525
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+RE R P+ F + IF A+C AN R M + + V + ++ LCK
Sbjct: 140 MRETRCCEICPEIF-WLIF-RAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCK 197
Query: 162 NEKVE----------------------------------EAYQLLDEMIERGANPDEWSY 187
+ V+ EA +L +EM ERG D +Y
Sbjct: 198 RKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAY 257
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N++L C V+ A +L M + PD +Y++ ++ V A +V + M +
Sbjct: 258 NSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR 317
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V TY+ +V LCK + K++EA + + M++ G+ P
Sbjct: 318 YNLVPNVFTYNCIVKKLCKSE-KVDEAYQLLDEMIERGVSP 357
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/350 (70%), Positives = 291/350 (83%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG+K + D+DQLL+ LCKRKHVK A +FFD E P KTYSIL+RG GDVG+
Sbjct: 149 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDS 208
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEARKLF+EM ER C VD++A+NSLLEA+CK GN+DEA+ + REM S G PDA SYSIF
Sbjct: 209 SEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIF 268
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A+CE NDIHS F+VLD M+RYNLVPNVFTYNCI++KLCK+EKV+EAYQLLDEMIERG
Sbjct: 269 IRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGV 328
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD WSYNAI A+HCD EVN ALRLI+RM KEN MPDRHTYNMVLK+L+RVGRFDR T+
Sbjct: 329 SPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTD 388
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW ME+RGFYP+ STY+VMVHG CKKKGKLEEACKYFEMM+D+GIPPYS TVE+LRNR+
Sbjct: 389 VWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRV 448
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+GLGF + I++LA KMERSTSC IQEL++ MRG+ + RSEE L S+
Sbjct: 449 IGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQNLPSE 498
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+RE R P+ F + IF A+C AN R M + + V + ++ LCK
Sbjct: 113 MRETRCCEICPEIF-WLIF-RAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCK 170
Query: 162 NEKVE----------------------------------EAYQLLDEMIERGANPDEWSY 187
+ V+ EA +L +EM ERG D +Y
Sbjct: 171 RKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAY 230
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N++L C V+ A +L M + PD +Y++ ++ V A +V + M +
Sbjct: 231 NSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR 290
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V TY+ +V LCK + K++EA + + M++ G+ P
Sbjct: 291 YNLVPNVFTYNCIVKKLCKSE-KVDEAYQLLDEMIERGVSP 330
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/333 (73%), Positives = 283/333 (84%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVEFG+KP+I DLDQLL+ LCKRKH K A Q FD KH+F KTYSILVRG GD+GE
Sbjct: 170 MVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGES 229
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+FDEM E++C VD+LA+NSLLEA CK G + EA+ M REM S G +PDA ++SIF
Sbjct: 230 VSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIF 289
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A+CEANDIH +RVLD MKRY+LVPNVFTYNC+I+KLCK EKVEEAYQLL+E+IER
Sbjct: 290 IRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSG 349
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD WSYNAILAYHC+ +EVN A RLI+RM K+N +PD+H+YNM+LKLL+RVGRFDRA E
Sbjct: 350 QPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIE 409
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VWESM ++GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM+DEGIPPYSSTVE+LRNRL
Sbjct: 410 VWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRL 469
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
+GLG LD IEILA KME ST+C+IQELA AMRG
Sbjct: 470 IGLGLLDYIEILAGKMEHSTACSIQELAIAMRG 502
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 7/210 (3%)
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR---YNLV 146
CK L R G + SY I + + ++ L ++ + +
Sbjct: 84 CKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEIS 143
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P VF + R + +A + D M+E G P + +L C R A ++
Sbjct: 144 PQVFWL--VFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQI 201
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
R+ K TY+++++ +G A +V++ M ++ V Y+ ++ C
Sbjct: 202 FDRV-KHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFC- 259
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K GK+ EA K F M GI P + T +
Sbjct: 260 KGGKVSEAYKMFREMGSNGIKPDACTFSIF 289
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/351 (66%), Positives = 283/351 (80%), Gaps = 1/351 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M EFG+KP+I+DLD+LL LCKRKHVK A Q F AK+ F+ T KTYSIL+ G G++G+
Sbjct: 173 MDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIGDS 232
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A LF MLE+ CPVD+LA+N+LL+A+CK G +DEA + +M S EPDAF+YSIF
Sbjct: 233 EKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIF 292
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH++C+A+D+ S FRVLD M+RYNL+PNVFTYNCII++LCKNE VEEAYQLLDEMI RG
Sbjct: 293 IHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGV 352
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD WSYNAI AYHCD EVN ALRL+ RM K+ +PDRHTYNMVLKLL+R+GRFD+ TE
Sbjct: 353 KPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTE 412
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VWE+M + FYPSVSTYSVM+HG CKKKGKLEEACKYFEMM+DEGIPPY +TVEMLRNRL
Sbjct: 413 VWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRL 472
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRG-KTGFRKSRSEETELESD 350
+GLGF+D IEILA KM +STS IQELAN M G +T +E ++ESD
Sbjct: 473 LGLGFIDHIEILAAKMRQSTSYAIQELANIMIGNRTAHNTLGRDEMDIESD 523
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+++ + L+E + L EMR S E ++ + + A+ +AN R
Sbjct: 111 VMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSF 170
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE----------------------- 174
+ M + + P + + ++ LCK + V++A QL +
Sbjct: 171 NRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIG 230
Query: 175 -----------MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
M+E+G D +YN +L C V+ A + M + V PD TY+
Sbjct: 231 DSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYS 290
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+ + A V + M + P+V TY+ ++ LCK + +EEA + + M+
Sbjct: 291 IFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNE-HVEEAYQLLDEMIS 349
Query: 284 EGIPP 288
G+ P
Sbjct: 350 RGVKP 354
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/355 (66%), Positives = 285/355 (80%), Gaps = 7/355 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M EFGI+ + DLD+LL+ LCKRKHV A QFFD K F P+VKTYSIL RG G VG+
Sbjct: 177 MGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDS 236
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A+K+FDEM ER C +D+LA+NSLLEA+CK G DEA+ M EM S G +PDA +YSIF
Sbjct: 237 NNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIF 296
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I + C+ ND+H+V+RVL+ KR NL+PNVFTYNC+I+KLCK++ VEEAYQ+LDEMIERG
Sbjct: 297 IRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGV 356
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD WSYNAI AYHCD +EVN AL L+ RM ++ +PD+HTYNMVLKLLVRVGRFDRA E
Sbjct: 357 TPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANE 416
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VWESM KRGFYPSVSTY+VM+HG CKKK KLEEACKYFEMM+DEGIPPY +TVE+LR+RL
Sbjct: 417 VWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRL 476
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKS-----RSEETELESD 350
+G+GF D + IL DKM+RSTSC+IQELAN M G G R+ ++EETE ESD
Sbjct: 477 LGIGFKDQVAILGDKMKRSTSCSIQELANLMSG--GKRREAQSMLKNEETEHESD 529
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/355 (66%), Positives = 285/355 (80%), Gaps = 7/355 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M EFGI+ + DLD+LL+ LCKRKHV A QFFD K F P+VKTYSIL RG G VG+
Sbjct: 177 MGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDS 236
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A+K+FDEM ER C +D+LA+NSLLEA+CK G DEA+ M EM S G +PDA +YSIF
Sbjct: 237 NNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIF 296
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I + C+ ND+H+V+RVL+ KR NL+PNVFTYNC+I+KLCK++ VEEAYQ+LDEMIERG
Sbjct: 297 IRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGV 356
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD WSYNAI AYHCD +EVN AL L+ RM ++ +PD+HTYNMVLKLLVRVGRFDRA E
Sbjct: 357 TPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANE 416
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VWESM KRGFYPSVSTY+VM+HG CKKK KLEEACKYFEMM+DEGIPPY +TVE+LR+RL
Sbjct: 417 VWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRL 476
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKS-----RSEETELESD 350
+G+GF D + IL DKM+RSTSC+IQELAN M G G R+ ++EETE ESD
Sbjct: 477 LGIGFKDQVAILGDKMKRSTSCSIQELANLMSG--GKRREAQSMLKNEETEHESD 529
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/351 (66%), Positives = 281/351 (80%), Gaps = 1/351 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M EFGIKP+I D D+LL LCK KHVK A QFFD AK+ F T KTYSIL+ G GD+G+
Sbjct: 173 MDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIGDS 232
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A +LF MLE+ CPVD+LA+N+LL+A+CK G +DEA + +M S EPDAF+YSIF
Sbjct: 233 EKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIF 292
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH++C+A+D+ S RVLD M+RYN++PNVFTYNCII++LCKNE VEEAY LLDEMI RG
Sbjct: 293 IHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGV 352
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD WSYNAI AYHCD EVN A+RL+ RM K+N +PDRHTYNMVLKLL+R+GRFD+ T+
Sbjct: 353 RPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTK 412
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW +M + FYPSVSTYSVM+HG CKKKGKLEEACKYFEMM+DEGIPPY +TVEMLRN+L
Sbjct: 413 VWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQL 472
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRG-KTGFRKSRSEETELESD 350
+GLGFLD IEILA KM +STS IQELAN M G +T R +E ++ESD
Sbjct: 473 LGLGFLDHIEILAAKMRQSTSYAIQELANIMIGNRTTHNTLRRDEMDIESD 523
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+++ + L+E + L EMR S E ++ + + A+ +AN R
Sbjct: 111 VMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSF 170
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE----------------------- 174
+ M + + P + ++ ++ LCK + V++A Q D+
Sbjct: 171 NRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIG 230
Query: 175 -----------MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
M+E+G D +YN +L C V+ A + M + V PD TY+
Sbjct: 231 DSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYS 290
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+ + A V + M + P+V TY+ ++ LCK + +EEA + M+
Sbjct: 291 IFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNE-HVEEAYLLLDEMIS 349
Query: 284 EGIPP 288
G+ P
Sbjct: 350 RGVRP 354
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/347 (63%), Positives = 288/347 (82%), Gaps = 1/347 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVEFGIKP + DLDQLLH+LC +KHV A +FF AK P+ KTYSILVRG + +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S ARK+FDEMLER C VD+LA+N+LL+A+CK+G++D + M +EM ++G +PDA+S++I
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FIHA+C+A D+HS ++VLD MKRY+LVPNV+T+N II+ LCKNEKV++AY LLDEMI++G
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
ANPD W+YN+I+AYHCD EVN A +L++RM + +PDRHTYNMVLKLL+R+GRFDRAT
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+WE M +R FYP+V+TY+VM+HGL +KKGKLEEAC+YFEMM+DEGIPPYS+TVEMLRNR
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
LVG G +D++++LA KMERS+SC++Q++A MRGK RSE +E
Sbjct: 464 LVGWGQMDVVDVLAGKMERSSSCSVQDMAVEMRGKRRRLGRRSENSE 510
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 10/270 (3%)
Query: 29 AHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK----CPVDILAH 82
AH+FF A+ +F ++++Y ILV LG + + L+D ++E + +
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFA---LLWDFLIEAREYNYFEISSKVF 141
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
+ A +A EA M G +P +H+ C+ ++ K
Sbjct: 142 WIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKG 201
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ +VP+ TY+ ++R + A ++ DEM+ER D +YNA+L C +V+
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDG 261
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
++ M + PD +++ + + G A +V + M++ P+V T++ ++
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
LCK + K+++A + M+ +G P + T
Sbjct: 322 TLCKNE-KVDDAYLLLDEMIQKGANPDTWT 350
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 219/347 (63%), Positives = 289/347 (83%), Gaps = 1/347 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVEFGIKP + DLDQLLH+LC RKHV A +FFD AK P+ KTYSILVRG + +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S ARK+FDEMLE C VD+LA+N+LL+A+CK+G++D A+ M +EM ++G +PDA+S++I
Sbjct: 224 ASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAI 283
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FIH++C+A+D+HS ++VLD MKRY+LVPNV+T+N II+ LCKNEKV++AY LLDEMI++G
Sbjct: 284 FIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
ANPD W+YN+I+AYHCD EVN A +L++RM + +PDRHTYNMVLKLL+R+GRFDR T
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVT 403
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+WE M +R FYP+V+TY+VM+HGL +KKGKLEEAC+YFEMM+DEGIPPYS+TVEMLRNR
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
LVG G +D++++LA KMERS+SC+++++A MRGK RSE +E
Sbjct: 464 LVGWGQMDVVDVLAGKMERSSSCSVRDMAVEMRGKRRRLGRRSEGSE 510
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 145/347 (41%), Gaps = 46/347 (13%)
Query: 29 AHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK----CPVDILAH 82
AH+FF AK +F ++++Y ILV LG + + L+D ++E + +
Sbjct: 85 AHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFA---LLWDFLIEAREYNYFEITSKVF 141
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
+ A +A EA M G +P +H+ C+ ++ D K
Sbjct: 142 WIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKG 201
Query: 143 YNLVPNVFTYNCIIR-----------------------------------KLCKNEKVEE 167
+ +VP+ TY+ ++R LCK+ V+
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDG 261
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
AY++ EM G PD +S+ + +CD ++V+ A +++ RM + +++P+ +T+N ++K
Sbjct: 262 AYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIK 321
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + + D A + + M ++G P TY+ ++ C ++ A K M
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC-DHCEVNRATKLLSRMDRTKCL 380
Query: 288 PYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
P T M+ L+ +G D + EI ER T+ + G
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHG 427
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/351 (66%), Positives = 283/351 (80%), Gaps = 1/351 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M EFGIKPSI D+D LL+ LCK+KHV+ A QFFD K F T KTYSIL+ G G +G+
Sbjct: 170 MDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDS 229
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR+LFD MLE+ C VD+LA+N+LLEA+CK G++DEA L +M S EPDAF+YSIF
Sbjct: 230 GKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIF 289
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I ++C+AN++HS F VLD M+R NL+PNVFTYNCII++LCK +KVEEAYQLLDEMI G
Sbjct: 290 IRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGL 349
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD WSYNAI AYHCD EVN AL+LI+RM K+ PDRHTYNMVLKLL+R+GRFD+ATE
Sbjct: 350 KPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATE 409
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VWE M + FYPSVSTYSVM+HGLCKKKGKLEEACKYF MM+DEGIPPY +T+EMLRNRL
Sbjct: 410 VWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRL 469
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKS-RSEETELESD 350
+GLG LD IEILA KM +STSC+IQELAN M G + + R +E+++ESD
Sbjct: 470 LGLGLLDNIEILAAKMRQSTSCSIQELANIMIGARSAQNTWRRDESDIESD 520
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 70/296 (23%)
Query: 29 AHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLL 86
AH+FF AK F +V+++ ILV LG + + L+D ++E +
Sbjct: 90 AHRFFLWAKSIPGFQHSVQSFHILVEILGRSKQFA---ILWDFLIETRES---------- 136
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
++ CK N E+ + I A+ A+ R M + +
Sbjct: 137 DSSCKITN---------EI-----------FWIIFTAYSRADLPDGAIRSFVRMDEFGIK 176
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQ----------------------------------LL 172
P++ + ++ LCK + V +A Q L
Sbjct: 177 PSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKARELF 236
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
D M+E+G + D +YN +L C V+ A+ + M + V PD TY++ ++
Sbjct: 237 DAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDA 296
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V + M + P+V TY+ ++ LCK K K+EEA + + M+ G+ P
Sbjct: 297 NNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIK-KVEEAYQLLDEMISSGLKP 351
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/351 (48%), Positives = 229/351 (65%), Gaps = 2/351 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG P+I D LL AL + V+ +FF + +F + K Y+IL+ G V +
Sbjct: 188 MAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESSAQFDVSAKAYTILISGWAVVKKP 247
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSI 119
AR LFDEM+ER +D+ +N+L++A+C+ G+I A L M +S G P+A +Y
Sbjct: 248 ENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPNAATYGP 307
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+HA C + D+ + RVLD M + L PNVFTYN +IR LC ++ EAY +LDE+ +G
Sbjct: 308 FLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILDEITTQG 367
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD WSYN +L HC EVN ALRLI+RM KE PDRH+YNM+LK+L+ VGRFD A
Sbjct: 368 EKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLIGVGRFDTAI 427
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EVW+ MEKRGF+P +TY+VM+HGL KKG+ E+AC YF MVDEGIPPY +T E+LR+R
Sbjct: 428 EVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQATCEVLRDR 487
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM-RGKTGFRKSRSEETELES 349
L+ LG D + +L D+M RSTS TIQE++ M R + G R +E +S
Sbjct: 488 LLMLGLRDQLGVLTDRMRRSTSYTIQEMSTVMCRNQYGLRALIAEPGRYDS 538
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 169/351 (48%), Positives = 229/351 (65%), Gaps = 2/351 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG P+I D LL AL + V+ +FF + +F + K Y+IL+ G V +
Sbjct: 181 MAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESTAQFDVSAKAYTILISGWAVVKKP 240
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSI 119
AR LFDEM++R +D+ +N+L++A+C+ G+I A L M +S G P+A +Y
Sbjct: 241 ENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPNAATYGP 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+HA C + D+ + RVLD M + L PNVFTYN +IR LC ++ EAY +LDE+ +G
Sbjct: 301 FLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILDEITTQG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD WSYN +L HC EVN ALRLI+RM KE PDRH+YNM+LK+L+ VGRFD A
Sbjct: 361 EKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLISVGRFDTAI 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EVW+ MEKRGF+P +TY+VM+HGL KKG+ E+AC YF MVDEGIPPY +T E+LR+R
Sbjct: 421 EVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQATCEVLRDR 480
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM-RGKTGFRKSRSEETELES 349
L+ LG D + +L D+M RSTS TIQE++ M R + G R +E +S
Sbjct: 481 LLMLGLRDQLGVLTDRMRRSTSYTIQEMSTIMCRNQYGLRALIAEPGRYDS 531
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 234/346 (67%), Gaps = 7/346 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG P++ DL LL L V+ A FF + +F + KTY+IL+ G V +
Sbjct: 173 MERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVSAKTYTILISGWAVVAKP 232
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSI 119
+A+KLFDEM+ER D+ A+N+L++A+C+ G++ A L++M RS G PDA +Y
Sbjct: 233 EKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGP 292
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ + C + D + RVLD M+ +L PNVFTYN +IR LC+ +V+EAY +L+EM G
Sbjct: 293 FLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILNEMATYG 352
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD WSYN +L HC EVN ALRLI+RM + +P+RH+YNM+LK+L+ +GR DRA
Sbjct: 353 EKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILKMLIAIGRVDRAI 412
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EVW+ MEKRGF+P +TY+VM+HGL KKG+ EEAC YF MVD+GIPPY +T ++LR+R
Sbjct: 413 EVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIPPYQATCQVLRDR 472
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
L+ LG D +E+L D+M RSTSCTIQ+LA+ M K R+EET
Sbjct: 473 LLRLGLRDDLEMLTDRMRRSTSCTIQDLASIMCNK------RAEET 512
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 73/273 (26%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF-------------------------- 150
+ + A+ A R SM+R+ +P V
Sbjct: 150 FPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 209
Query: 151 --------TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
TY +I K E+A +L DEMIERG PD +YNA++ C +V +
Sbjct: 210 IQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVAL 269
Query: 203 ------------------------------------ALRLITRMTKENVMPDRHTYNMVL 226
ALR++ RM ++ P+ TYN V+
Sbjct: 270 AQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVI 329
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+LL +G D A + M G P V +Y+ +++ CK K ++ +A + M DEG+
Sbjct: 330 RLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLK-EVNKALRLISRM-DEGL 387
Query: 287 -PPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
P + M+ L+ +G +D + D ME+
Sbjct: 388 CLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEK 420
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 183/317 (57%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G+ P++ + LL ALCK K+V+ A + F+ F+P KTYSIL+ G G L
Sbjct: 162 MEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNL 221
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ RK++ +ML+ C DI+ + +++++CK G ++EA ++++M S G +P F YS+
Sbjct: 222 PKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVL 281
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + I M++ +VP+V YN ++ CK +K + A++++D+M G
Sbjct: 282 VHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGI 341
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N IL + + A R+ RM K PD TY M++K+ R + A +
Sbjct: 342 TPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRLEMALK 400
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M + F PS+ T+SV+++GLC KG++ +AC E M+++GI P ST LR L
Sbjct: 401 VWKYMRLKQFLPSMHTFSVLINGLC-DKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLL 459
Query: 301 VGLGFLDIIEILADKME 317
+ G D++E L DKM+
Sbjct: 460 LKEGRKDVLEFLVDKMK 476
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE- 174
++ I + + A + + M++Y +VPN+ +N ++ LCK++ V +A ++ ++
Sbjct: 138 TFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQM 197
Query: 175 ---------------------------------MIERGANPDEWSYNAILAYHCDRAEVN 201
M++ G PD +Y ++ C V
Sbjct: 198 NGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVE 257
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A+ ++ MT P Y++++ R + A + M+K G P V Y+ +V
Sbjct: 258 EAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALV 317
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
CK K K + A + + M GI P S T ++ N+L+ LG
Sbjct: 318 TAFCKVK-KFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLG 359
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
++ R G S+ + + + ++ V+ M+R +V NV T+ I+RK +
Sbjct: 91 KQRRGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGVV-NVETFGIIMRKYARA 149
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+KV+EA + M + G P+ ++N++L C V A + +M PD TY
Sbjct: 150 QKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTY 208
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+++L+ R + +V+ M G P + TY +MV LC K G++EEA + M
Sbjct: 209 SILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLC-KTGRVEEAVFVVQDMT 267
Query: 283 DEGIPPYSSTVEML 296
G P + +L
Sbjct: 268 SRGCQPTTFIYSVL 281
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ C+ +++A + + + +F P++ T+S+L+ GL D GE+S+A L ++M+E+
Sbjct: 385 MIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKG 444
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L + + K G D ++ +M+ + EP
Sbjct: 445 IRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEP 482
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 184/316 (58%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ +KP++ + LL ALCK K+V+ A + FDN K +F P KTYSIL+ G G L
Sbjct: 116 MEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNL 175
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR+++ EM++ C D + ++ +++ +CKAG +DEA +++EM +P +F YS+
Sbjct: 176 PKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVL 235
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + N I M+R ++ +V YN +I CK K++ Y++L +M +G
Sbjct: 236 VHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGV 295
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
NP+ + N I+ R E + A ++ RM K PD +Y M++K+ D A +
Sbjct: 296 NPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALK 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+W+ M+K+ F PS+ T+SV+++GLC + G +AC E M+++GI P +T LR+ L
Sbjct: 355 IWKYMKKKQFVPSMHTFSVLINGLC-QIGNATQACVLLEEMIEKGIRPSGATFGRLRHLL 413
Query: 301 VGLGFLDIIEILADKM 316
+ G D+++ L +KM
Sbjct: 414 IKEGRKDVLKFLQEKM 429
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 42/266 (15%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRS---IGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+ A++S++E++ K ++ MR+ + E ++ I + + A +
Sbjct: 56 VRAYHSMIESLAKIRQYQMVWDLVNAMRNKEILNVE----AFCIIMRKYARAQKVEEAVY 111
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD---------------------- 173
+ M++YN+ PNV +N ++ LCK++ V +A ++ D
Sbjct: 112 TFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGR 171
Query: 174 ------------EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
EMI+ G PDE +Y+ ++ C V+ A+ ++ M N P
Sbjct: 172 APNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFI 231
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y++++ R + A + ME+ G V+ Y+ ++ C K K++ + + M
Sbjct: 232 YSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFC-KANKMKNVYRVLKDM 290
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P S T ++ N L+G G D
Sbjct: 291 DLKGVNPNSRTCNIIINSLIGRGETD 316
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P + ++ C RK + +A + + K +F P++ T+S+L+ GL +G ++A
Sbjct: 330 EPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACV 389
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L +EM+E+ L + K G D + +M + EP
Sbjct: 390 LLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLLVKEP 436
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 181/317 (57%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G+ P++ + LL ALCK K+V+ A + FD F P KTYSIL+ G G L
Sbjct: 163 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEGWGKAPNL 222
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ R+++ EML+ C DI+ + +++++CK G ++EA ++++M S G +P F YS+
Sbjct: 223 PKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVL 282
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + I M++ +VP+V YN ++ CK +K E A++++D+M G
Sbjct: 283 VHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGI 342
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N IL + + A R+ RM K PD TY M++K+ + A +
Sbjct: 343 APNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALK 401
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M + F PS+ T+SV+++GLC KG++ +AC E M+++GI P ST LR L
Sbjct: 402 VWKYMRLKQFLPSMHTFSVLINGLC-DKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLL 460
Query: 301 VGLGFLDIIEILADKME 317
+ G D++E L DKM+
Sbjct: 461 LKEGRKDVLEFLVDKMK 477
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 37/224 (16%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
++ I + + A + M++Y +VPN+ +N ++ LCK++ V +A ++ D+M
Sbjct: 139 TFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKM 198
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
R NPD +Y+ +L + + + M PD TY +++ L + GR
Sbjct: 199 NGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRV 257
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVH--------------------------------- 262
+ A V + M RG P+ YSV+VH
Sbjct: 258 EEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNAL 317
Query: 263 --GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
CK K K E A + + M GI P S T ++ N+L+ LG
Sbjct: 318 VTAFCKVK-KFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLG 360
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ C+ +V++A + + + +F P++ T+S+L+ GL D GE+S+A L ++M+E+
Sbjct: 386 MIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKG 445
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L + + K G D ++ +M+ + EP
Sbjct: 446 IRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEP 483
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 179/316 (56%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK K+V+ A + FD+ K F P KTYSIL+ G G L
Sbjct: 116 MDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNL 175
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM+ C DI+ + +++ +CKAG +DEA G++ EM S +P F YS+
Sbjct: 176 PKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVL 235
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + N I M+ + P+V YN +I CK +++ Y++L+EM +G
Sbjct: 236 VHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGV 295
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N IL+ R E + A R+ RM K PD TY M++K+ +A +
Sbjct: 296 TPNSRTFNIILSSLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALK 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M+ + F PS+ T+ V+++GLC +KG + +AC E M+++GI P T LR L
Sbjct: 355 VWKYMKLKRFMPSMHTFQVLINGLC-EKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLL 413
Query: 301 VGLGFLDIIEILADKM 316
+ G D+++ L K+
Sbjct: 414 IKEGREDVLKFLQKKI 429
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
++ I + + A + + M +Y++ PN+ +N ++ LCK++ V +A ++ D +
Sbjct: 92 TFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSI 151
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+R PD +Y+ +L + A + M PD TY +++ +L + GR
Sbjct: 152 KDRFV-PDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRV 210
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVH--GLCKKKGKLEEACKYFEMMVDEGIPP 288
D A + M+ P+ YSV+VH G+ + ++E+A F M + GI P
Sbjct: 211 DEALGIVNEMDSTVCKPTPFIYSVLVHTYGI---ENRIEDAVSTFLEMENNGIEP 262
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ C+R +K A + + K F P++ T+ +L+ GL + G++++A L +EM+E+
Sbjct: 339 MIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKG 398
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
+ L + + K G D + +++ + +P
Sbjct: 399 IRPSGVTFGRLRQLLIKEGREDVLKFLQKKINVLVNDP 436
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 181/316 (57%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK K+V A + F+ K +F P KTYSIL+ G G L
Sbjct: 137 MEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPNL 196
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM++ C DI+ + +++ +CKAG +DEA G+++EM S +P +F YS+
Sbjct: 197 PKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVL 256
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + N I M+R + +V YN +I CK K++ AY++L+EM +G
Sbjct: 257 VHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGI 316
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ + N IL + + A R+ RM K PD TY M++K+ + + A +
Sbjct: 317 RPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALK 375
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M + F PS+ T+SV+++GLC KKG +AC E M+++GI P S T L+ L
Sbjct: 376 VWKYMRLKQFVPSMHTFSVLINGLC-KKGNASKACILLEEMIEKGIRPSSVTFGKLKQLL 434
Query: 301 VGLGFLDIIEILADKM 316
+ G D++E L +KM
Sbjct: 435 IKEGREDVLEFLQEKM 450
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 182/317 (57%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G+ ++ + LL ALCK K+V+ A + FD + F+P KTYSIL+ G G L
Sbjct: 166 MEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSL 225
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ R+++ +ML C DI+ + +++A+CK G ++EA ++++M S G +P F YSI
Sbjct: 226 PKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSIL 285
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + I M++ ++P+V YN +I CK +K E A++++D+M G
Sbjct: 286 VHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGI 345
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P+ ++N IL + + A R+ M K PD TY M++K+ + + A +
Sbjct: 346 SPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCENDKIEMALK 404
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M + F PS+ T+SV+++GLC KG++ +AC E M+++GI P ST LR L
Sbjct: 405 VWKYMRLKQFLPSMHTFSVLINGLC-DKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLL 463
Query: 301 VGLGFLDIIEILADKME 317
+ G D+++ L +KM+
Sbjct: 464 LKEGRKDVLDFLVEKMK 480
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 51/336 (15%)
Query: 12 DLDQLLHALCK-----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
D L LCK RK + H+ D++ TP + S+L + L + G L A +
Sbjct: 36 DASDLSKRLCKLIISCRKASALEHEL-DHSGVRVTPEIAE-SVL-KHLDNAGML--AYRF 90
Query: 67 FDEMLERK---CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F+ ++K C + ++++++ ++ K ++ MR G + ++ I +
Sbjct: 91 FEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGV-ANVETFGIIMRK 149
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + + M++Y + N+ +N ++ LCK++ V +A ++ D+M R +PD
Sbjct: 150 YARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPD 208
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L + + + M PD TY +++ L + GR + A V +
Sbjct: 209 AKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQ 268
Query: 244 SMEKRGFYPSVSTYSVMVH-----------------------------------GLCKKK 268
M RG P+ YS++VH CK K
Sbjct: 269 DMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVK 328
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K E A + + M GI P S T ++ N L+ LG
Sbjct: 329 -KFENAFRVMDDMQGHGISPNSRTWNIILNTLISLG 363
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
KP ++ C+ +++A + + + +F P++ T+S+L+ GL D GE+S+A
Sbjct: 380 KPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACV 439
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L ++M+E+ L + + K G D ++ +M+ + EP
Sbjct: 440 LLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKILAQEP 486
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 179/316 (56%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + L ALCK K+V+ A + FD++K F P KTY+IL+ G G L
Sbjct: 116 MEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNL 175
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM++ C DI+ + +++ +CKAG +DEA +++EM +P +F YS+
Sbjct: 176 PKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVL 235
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH + N I M++ + +V YN +I CK K + Y++L+EM +G
Sbjct: 236 IHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGM 295
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ + N IL R E + A R+ RM K PD TY M++K+ + A +
Sbjct: 296 QPNSRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALK 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M+K+ F PS+ T+SV+++GLC ++G + AC E M+++GI P T LR+ L
Sbjct: 355 VWKYMKKKHFVPSMHTFSVLINGLC-EEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLL 413
Query: 301 VGLGFLDIIEILADKM 316
+ G D++E L K+
Sbjct: 414 IKEGREDVLEFLQQKI 429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 128/282 (45%), Gaps = 5/282 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
VA++FF+ A+ + +T +V+ Y ++ L + + L + M +RK +++ +
Sbjct: 38 VAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIMWDLINAM-KRKRMLNVETFCII 96
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ +A ++EA M P+ +++ A C++ ++ + DS K
Sbjct: 97 MRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKD-RF 155
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP+ TY ++ K + +A ++ EM++ G +PD +Y ++ C V+ AL
Sbjct: 156 VPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALD 215
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M P Y++++ R + A + + MEK G V+ Y+ ++ C
Sbjct: 216 IVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFC 275
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
K K + + M +G+ P S T+ ++ N L+ G D
Sbjct: 276 -KVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETD 316
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ C+R +++A + + K + F P++ T+S+L+ GL + G++S A + ++M+E+
Sbjct: 339 MIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKG 398
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
+ L + K G D + +++ + EP
Sbjct: 399 IRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVLIKEP 436
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 180/316 (56%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK K+V+ A + F+N + FTP KTYSIL+ G G L
Sbjct: 158 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNL 217
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM++ C DI+ ++ +++ +CKAG +DEA G++R M +P F YS+
Sbjct: 218 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 277
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + N + M+R + +V +N +I CK +++ Y++L EM +G
Sbjct: 278 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 337
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ S N IL + +R E + A + +M K PD TY MV+K+ + A +
Sbjct: 338 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADK 396
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M K+G +PS+ T+SV+++GLC+++ ++AC E M++ GI P T LR L
Sbjct: 397 VWKYMRKKGVFPSMHTFSVLINGLCEERTT-QKACVLLEEMIEMGIRPSGVTFGRLRQLL 455
Query: 301 VGLGFLDIIEILADKM 316
+ D+++ L +KM
Sbjct: 456 IKEEREDVLKFLNEKM 471
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+ ++FF ++ + + +V+ Y +++ + + L + M ++K +++ +
Sbjct: 80 LTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIV 138
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ +A +DEA M P+ +++ + A C++ ++ V ++M R
Sbjct: 139 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRF 197
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+ TY+ ++ K + +A ++ EMI+ G +PD +Y+ ++ C V+ AL
Sbjct: 198 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 257
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M P Y++++ R + A + + ME+ G V+ ++ ++ C
Sbjct: 258 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 317
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K +++ + + M +G+ P S + ++ L+ G
Sbjct: 318 -KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 355
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 180/316 (56%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK K+V+ A + F+N + FTP KTYSIL+ G G L
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNL 253
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM++ C DI+ ++ +++ +CKAG +DEA G++R M +P F YS+
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + N + M+R + +V +N +I CK +++ Y++L EM +G
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ S N IL + +R E + A + +M K PD TY MV+K+ + A +
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADK 432
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M K+G +PS+ T+SV+++GLC+++ ++AC E M++ GI P T LR L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTT-QKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Query: 301 VGLGFLDIIEILADKM 316
+ D+++ L +KM
Sbjct: 492 IKEEREDVLKFLNEKM 507
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+ ++FF ++ + + +V+ Y +++ + + L + M ++K +++ +
Sbjct: 116 LTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIV 174
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ +A +DEA M P+ +++ + A C++ ++ V ++M R
Sbjct: 175 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRF 233
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+ TY+ ++ K + +A ++ EMI+ G +PD +Y+ ++ C V+ AL
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M P Y++++ R + A + + ME+ G V+ ++ ++ C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K +++ + + M +G+ P S + ++ L+ G
Sbjct: 354 -KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 181/317 (57%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +G+ ++ + LL ALCK K+V+ A + FD + F+P KTYSIL+ G G L
Sbjct: 164 MERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNL 223
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ R+++ +ML C DI+ + +++A+CK G ++EA ++++M S G +P F YS+
Sbjct: 224 PKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVL 283
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + I M++ +VP+V YN ++ CK +K + A++++D+M G
Sbjct: 284 VHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGI 343
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P+ ++N IL + + A R+ M K PD TY M++K+ + + A +
Sbjct: 344 SPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTMMIKMFCENDKIEMALK 402
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M + F PS+ T+SV+++GLC KG++ +AC E M+++GI P ST LR L
Sbjct: 403 VWKYMRLKQFLPSMHTFSVLINGLC-DKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLL 461
Query: 301 VGLGFLDIIEILADKME 317
+ G D+++ L +KM+
Sbjct: 462 LKEGRKDVLDFLVEKMK 478
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 140/339 (41%), Gaps = 51/339 (15%)
Query: 9 SIYDLDQLLHALCK-----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
++ D L LCK RK V H+ D++ TP V +L R L + G L A
Sbjct: 31 TLLDASDLAKRLCKLIISCRKASAVEHEL-DHSGVRVTPEVAE-RVLER-LDNAGML--A 85
Query: 64 RKLFDEMLERK---CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ F+ +K C + ++++++ ++ K ++ MR G + ++SI
Sbjct: 86 YRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGV-ANVETFSII 144
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + A + M+RY + N+ +N ++ LCK++ V +A ++ D+M R
Sbjct: 145 MRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-F 203
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD +Y+ +L + + + M PD TY +++ L + GR + A
Sbjct: 204 SPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVC 263
Query: 241 VWESMEKRGFYPSVSTYSVMVH-----------------------------------GLC 265
V + M RG P+ YSV+VH C
Sbjct: 264 VVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFC 323
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K K K + A + + M GI P S T ++ N L+ LG
Sbjct: 324 KVK-KFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLG 361
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
KP ++ C+ +++A + + + +F P++ T+S+L+ GL D GE+S+A
Sbjct: 378 KPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACV 437
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L ++M+E+ L + + K G D ++ +M+ + EP
Sbjct: 438 LLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKMLIQEP 484
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 181/316 (57%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G+ P++ + LL ALCK K+V+ A + FD F+P KTYSIL+ G G L
Sbjct: 161 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNL 220
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ R+++ EML+ C DI+ + +++++CK G ++EA ++++M S G +P + YS+
Sbjct: 221 PKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVL 280
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + I M++ +VP++ YN ++ CK +K E A+++L++M G
Sbjct: 281 VHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGI 340
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ ++N IL + + A ++ RM K PD TY M++K+ + + A +
Sbjct: 341 TTNSRTWNIILNHLISLGRDDEAYKVFRRMIK-CCQPDCDTYTMMIKMFCENDKVEMALK 399
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M + F PS+ T+SV+++GLC K+ ++ +AC E M+++GI P ST LR L
Sbjct: 400 VWKYMRLKQFLPSMHTFSVLINGLCDKR-EVSQACVLLEDMIEKGIRPPGSTFGKLRQLL 458
Query: 301 VGLGFLDIIEILADKM 316
+ G D+++ L +KM
Sbjct: 459 LKEGRKDVLDFLVEKM 474
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 44/319 (13%)
Query: 23 RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK---CPVDI 79
RK V H+ D++ TP V +L R L + G L A + F+ +K C +
Sbjct: 47 RKASAVEHEL-DHSGVRVTPDVAE-RVLER-LDNAGML--AYRFFEWARRQKRGGCAHTV 101
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
++++++ ++ K ++ MR GA + ++ I + + A + +
Sbjct: 102 RSYHTVVASLAKIRQYQLMWDVVAVMRREGA-VNVETFGIIMRKYARAQKVDEAVYTFNV 160
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD-------------------------- 173
M++Y +VPN+ +N ++ LCK++ V +A ++ D
Sbjct: 161 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNL 220
Query: 174 --------EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EM++ G PD +Y ++ C V A+R++ MT P + Y+++
Sbjct: 221 PKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVL 280
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ R + A + MEK G P + Y+ +V CK K K E A + M G
Sbjct: 281 VHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAK-KFENAFRVLNDMEGHG 339
Query: 286 IPPYSSTVEMLRNRLVGLG 304
I S T ++ N L+ LG
Sbjct: 340 ITTNSRTWNIILNHLISLG 358
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
+P ++ C+ V++A + + + +F P++ T+S+L+ GL D E+S+A
Sbjct: 375 QPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACV 434
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L ++M+E+ L + + K G D ++ +M + EP
Sbjct: 435 LLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMNILIQEP 481
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 178/316 (56%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK K+V+ A + F+N + FTP KTYSIL+ G G L
Sbjct: 159 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNL 218
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM++ DI+ ++ +++ +CKAG +DEA G++R M +P F YS+
Sbjct: 219 PKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 278
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + + M+R + +V +N +I CK +++ Y++L EM +G
Sbjct: 279 VHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGV 338
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ S N IL + DR E + A + +M K PD TY M++K+ + A +
Sbjct: 339 TPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADK 397
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M K+G +PS+ T+SV+++GLC++ ++AC E M++ GI P +T LR L
Sbjct: 398 VWKYMRKKGVFPSMHTFSVLINGLCEEPNT-QKACVLLEEMIEMGIRPSGATFGRLRQLL 456
Query: 301 VGLGFLDIIEILADKM 316
+ D+++ L +KM
Sbjct: 457 LKEDREDVLKFLNEKM 472
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/279 (17%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+A++FF ++ + + +V+ Y +++ + + L + M+++K +++ +
Sbjct: 81 LAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKM-LNVETFCIV 139
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ +A +DEA M P+ +++ + A C++ ++ + ++M R
Sbjct: 140 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENM-RDRF 198
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+ TY+ ++ K + +A ++ EM++ G+ PD +Y+ ++ C V+ AL
Sbjct: 199 TPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALG 258
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M P Y++++ R + A + + ME+ G V+ ++ ++ C
Sbjct: 259 IVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 318
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K +++ + + M +G+ P S + ++ L+ G
Sbjct: 319 -KTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRG 356
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 170/316 (53%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK +V+ A + FD K +F P K+YSIL+ G G L
Sbjct: 138 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNL 197
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
AR++F EM+E C D++ + +++ +CKAG +DEA +++EM P +F YS+
Sbjct: 198 PRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVL 257
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + + I M + + +V YN +I CK K + +++L EM G
Sbjct: 258 VHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGV 317
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ + N I++ + + + A R+ RM K PD TY M++K+ + A +
Sbjct: 318 APNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALK 376
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+W+ M+ + F PS+ T+S ++ GLC+K +AC E M+++GI P T LR L
Sbjct: 377 IWKYMKSKQFVPSMHTFSALIKGLCEKDNA-AKACVVMEEMIEKGIRPSRITFGRLRQLL 435
Query: 301 VGLGFLDIIEILADKM 316
+ G D+++ L +KM
Sbjct: 436 IKEGREDVLKFLHEKM 451
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 3/208 (1%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
I A++ ++E++ K ++ MR G + ++ I + + AN + +
Sbjct: 78 IRAYHLMIESLAKIRQYQIVWDLVSAMRKKGM-LNVETFCIMMRKYARANKVDEAVYTFN 136
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M +Y++VPN+ +N ++ LCK+ V +A ++ D M + PDE SY+ +L
Sbjct: 137 VMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFV-PDEKSYSILLEGWGKAP 195
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ A + M + PD TY +++ +L + GR D A EV + M+ P+ YS
Sbjct: 196 NLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYS 255
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGI 286
V+VH + ++E+A F M +GI
Sbjct: 256 VLVHTY-GVEHRIEDAIDTFLEMAKKGI 282
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 171/317 (53%), Gaps = 12/317 (3%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
D LL L K +VK+A Q F+ K +F K Y+IL+ G + +S A +L EM+
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMV 249
Query: 72 ERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDAFSYSIFI 121
ER +++ +N LL +C+ + I +A +L EMR G EPD SYSI I
Sbjct: 250 ERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVI 309
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H + A+ L MK + P V TY +++ LC ++E+A +L+ +M++ G +
Sbjct: 310 HVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVS 369
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +YN + R + + ALRL +M +E + +PD HTYN+++ + V++ R + E
Sbjct: 370 PSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQE 429
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+W+ M+ G P + +Y++++HGLC+K+ K +EAC +F M+++G P T E L L
Sbjct: 430 IWDDMKTSGAGPDLDSYTLLIHGLCEKQ-KWKEACHFFVEMIEKGYLPQKITFETLYRGL 488
Query: 301 VGLGFLDIIEILADKME 317
+ L L K+E
Sbjct: 489 IQSDMLKTWRRLKKKLE 505
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 17/318 (5%)
Query: 16 LLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM---L 71
++ L K + VA QF + ++ PT T+ IL+R G +A + FD+M +
Sbjct: 123 IIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFV 182
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
E+ D + LL+ + K G + A + + R E +A Y+I I+ +C+ N +
Sbjct: 183 EKDADSDDFCY--LLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIYGWCKINRVS 239
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCK----------NEKVEEAYQLLDEMIERGAN 181
R+L M J NV TYN ++ +C+ + +A ++LDEM + G
Sbjct: 240 IAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIE 299
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SY+ ++ + + + L + M + + P TY V+K L GR + A E+
Sbjct: 300 PDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEEL 359
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K G PS +TY+ +K Y +M + P T +L V
Sbjct: 360 VSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFV 419
Query: 302 GLGFLDIIEILADKMERS 319
L ++I++ + D M+ S
Sbjct: 420 KLNRMEIVQEIWDDMKTS 437
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 46/290 (15%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D++++N +++ + K D A + EM EP + ++ I I A R
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 138 DSM-----------------------------------KRYNLVPNVFTYNCIIRKLCKN 162
D M +++ N Y +I CK
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKI 235
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHC--------DRAE--VNMALRLITRMTK 212
+V A +LL EM+ERG + +YN +L C DR E + A +++ M +
Sbjct: 236 NRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQ 295
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ PD +Y++V+ + R + + + M+ +G +P+V+TY+ +V LC G+LE
Sbjct: 296 XGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLC-SCGRLE 354
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
+A + MV +G+ P ++T G D L KM+ SC
Sbjct: 355 DAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSC 404
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV++G+ P + L++ LCK +K A D P + Y LV G G+
Sbjct: 304 MVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGK 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA + EM+ + + +++L+ +CK G + A +L+EM +G PD F+Y+
Sbjct: 364 TAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNP 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + +D F +L+ M+ ++PNV++Y +I LC+N + +EA LL+EMI G
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y ++ H +++A + +MTK NV PD YN ++K L VGR + A
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
E + ++KRG P TYS ++HG C K G LE+A + M++ G+ P + T
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYC-KTGNLEKADQLLRQMLNSGLKPNADT 595
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 146/291 (50%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ---FFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G+ P+ + LL L + +++ + F + A P V TYS +
Sbjct: 199 MADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG--ILPDVYTYSTFIEAHCKA 256
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ A+K+F+EM R C ++ + +N ++ +C++G ++EA G EM G PDAF+Y
Sbjct: 257 RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTY 316
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ C+ + + +LD M L PN+ Y ++ K K EA+ +L EMI
Sbjct: 317 GALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMIS 376
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P++ Y+ ++ C ++ A +L+ M K + PD TYN +++ + D
Sbjct: 377 AGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDG 436
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A E+ M G P+V +Y +M++GLC + G+ +EA E M+ EG+ P
Sbjct: 437 AFELLNEMRNSGILPNVYSYGIMINGLC-QNGESKEAGNLLEEMISEGLKP 486
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP+ + L+ K ++ +A + + K P + Y+ L++GL VG
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + + ++ +R D ++ L+ CK GN+++A +LR+M + G +P+A +Y+
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + ++ND V +L SM P+ Y +IR L ++E +E A+ +L E+ + G
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y+++++ C A++ A+ L+ M KE + P YN ++ R G RA
Sbjct: 659 LVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 718
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V++S+ +G P+ TY+ ++ G C K G + +A ++ M+D GI P
Sbjct: 719 NVFDSILAKGLVPNCVTYTALIDGNC-KNGDITDAFDLYKEMLDRGIAP 766
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 3/291 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+H CK +++ A Q + P TY+ L+ G + +
Sbjct: 553 GLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKV 612
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ML D + ++ + ++ N++ A +L E+ G PD YS I
Sbjct: 613 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 672
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ +LD M + L P + YN +I C++ + A + D ++ +G P+
Sbjct: 673 LCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPN 732
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ +C ++ A L M + PD YN++ ++A + E
Sbjct: 733 CVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 792
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
M RG Y +VS ++ +VHG C K+GKL+E K +M+D I P + TVE
Sbjct: 793 EMFNRG-YANVSLFNTLVHGFC-KRGKLQETEKLLHVMMDREIVPNAQTVE 841
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 35/319 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
GI P +Y + A CK + A + F+ + + TY++++ GL G + EA
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+EM++ D + +L+ +CK + EA +L EM G +P+ Y +
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + F +L M + PN Y+ +IR LCK ++ A +LL EMI+ G PD
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ H + + + A L+ M ++P+ ++Y +++ L + G A + E
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK----------------------------------G 269
M G P+ Y+ ++ G K+ G
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537
Query: 270 KLEEACKYFEMMVDEGIPP 288
++EEA +Y+ + G+ P
Sbjct: 538 RMEEAEEYYAQVQKRGLVP 556
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G++P + + L+ ++ A + + ++ P V +Y I++ GL GE
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM+ + + L+ K GNI A L +M PD F Y+
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +++ LVP+ FTY+ +I CK +E+A QLL +M+ G
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +L + + ++ M PD H Y +V++ L R + A
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V +EK G P + YS ++ GLC K +E+A + M EG+ P
Sbjct: 649 MVLTEVEKNGLVPDLHIYSSLISGLC-KIADMEKAVGLLDEMAKEGLEP 696
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 35/283 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP+ LL K + KV+ P Y I++R L
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + E+ + D+ ++SL+ +CK ++++A G+L EM G EP Y+
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNA 703
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + DI V DS+ LVPN TY +I CKN + +A+ L EM++RG
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 180 ANPDEWSYN----------------------------------AILAYHCDRAEVNMALR 205
PD + YN ++ C R ++ +
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEK 823
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
L+ M ++P+ T V+ + G+ A V+ ++++
Sbjct: 824 LLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 35/212 (16%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P ++ L+ LCK ++ A D AK P + Y+ L+ G G++S A
Sbjct: 658 GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 717
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF--- 120
R +FD +L + + + + +L++ CK G+I +A + +EM G PDAF Y++
Sbjct: 718 RNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG 777
Query: 121 -------------------------------IHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
+H FC+ + ++L M +VPN
Sbjct: 778 CSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNA 837
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
T ++ + K K+ EA+++ E+ ++ A+
Sbjct: 838 QTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ K G++ A ++ M +G P + + A+ + ++++ M+
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++P+V+TY+ I CK + A ++ +EM R +E +YN +++ C V A
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + PD TY ++ L + R A + + M G P++ Y +V G
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGF 358
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K+GK EA + M+ G+ P + L L +G L
Sbjct: 359 -MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-----------------------RSIG 109
R P A L ++C A +A+G+L +M RS
Sbjct: 109 RIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRS 168
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
P + + + + + + +V+ M L P N +++ L + + +E +
Sbjct: 169 PSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLW 228
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L M G PD ++Y+ + HC + + A ++ M + + + TYN+++ L
Sbjct: 229 KLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 288
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R G + A E M G P TY +++GLCK +L+EA + M G+ P
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGS-RLKEAKALLDEMSCSGLKP 346
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 171/317 (53%), Gaps = 12/317 (3%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
D LL L K +VK+A Q F+ K +F K Y+IL+ G + +S A +L EM+
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMV 249
Query: 72 ERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDAFSYSIFI 121
ER +++ +N LL +C+ + I +A +L EMR G EPD SYSI I
Sbjct: 250 ERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVI 309
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H + A+ L MK + P V TY +++ LC ++E+A +L+ +M++ G +
Sbjct: 310 HVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVS 369
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +YN + R + + ALRL +M +E + +PD HTYN+++ + V++ R + E
Sbjct: 370 PSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQE 429
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+W+ M+ G P + +Y++++HGLC+K+ K +EAC +F M+++G P T E L L
Sbjct: 430 IWDDMKTSGAGPDLDSYTLLIHGLCEKQ-KWKEACHFFVEMIEKGYLPQKITFETLYRGL 488
Query: 301 VGLGFLDIIEILADKME 317
+ L L K+E
Sbjct: 489 IQSDMLKTWRRLKKKLE 505
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 17/318 (5%)
Query: 16 LLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM---L 71
++ L K + VA QF + ++ PT T+ IL+R G +A + FD+M +
Sbjct: 123 IIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFV 182
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
E+ D + LL+ + K G + A + + R E +A Y+I I+ +C+ N +
Sbjct: 183 EKDADSDDFCY--LLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIYGWCKINRVS 239
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN----------EKVEEAYQLLDEMIERGAN 181
R+L M + NV TYN ++ +C+ + +A ++LDEM ++G
Sbjct: 240 IAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIE 299
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SY+ ++ + + + L + M + + P TY V+K L GR + A E+
Sbjct: 300 PDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEEL 359
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K G PS +TY+ +K Y +M + P T +L V
Sbjct: 360 VSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFV 419
Query: 302 GLGFLDIIEILADKMERS 319
L ++I++ + D M+ S
Sbjct: 420 KLNRMEIVQEIWDDMKTS 437
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 46/290 (15%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D++++N +++ + K D A + EM EP + ++ I I A R
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 138 DSM-----------------------------------KRYNLVPNVFTYNCIIRKLCKN 162
D M +++ N Y +I CK
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKI 235
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM----------ALRLITRMTK 212
+V A +LL EM+ERG + +YN +L C RA ++ A +++ M +
Sbjct: 236 NRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQ 295
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ + PD +Y++V+ + R + + + M+ +G +P+V+TY+ +V LC G+LE
Sbjct: 296 KGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLC-SCGRLE 354
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
+A + MV +G+ P ++T G D L KM+ SC
Sbjct: 355 DAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSC 404
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR----------KHVKVAHQFFDNAKHE-FTPTVKTYSI 49
MVE GI+ ++ + LL+ +C+R + ++ A + D + + P V +YSI
Sbjct: 248 MVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSI 307
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
++ + M ++ + + S+++ +C G +++A ++ +M G
Sbjct: 308 VIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDG 367
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P A +Y+ F + D + R+ MK Y+ +P++ TYN ++ K ++E
Sbjct: 368 VSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIV 427
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++ D+M GA PD SY ++ C++ + A M ++ +P + T+ + +
Sbjct: 428 QEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRG 487
Query: 229 LVRVGRFDRATEVWESMEKR 248
L++ + W ++K+
Sbjct: 488 LIQSDML----KTWRRLKKK 503
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 170/318 (53%), Gaps = 3/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G++PSIY + LL+A CK +K A + F A+ F P V TYS ++ GL G+
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 60 LSEARK-LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++EA + LF +M+ER C + +A+N+L+ +CK NI+ A+ +L EM S G PD +Y+
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C + + DSM P+V YN ++ L K K +EA +L ++I +
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN+IL ++ ++ A + +M P+ TY++VL R + D A
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V E M K G P V TY++++ GLCK +++A + F MVD G P + ++ N
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTN-LVDKAHELFSTMVDNGCAPDIVSYSVVLN 367
Query: 299 RLVGLGFLDIIEILADKM 316
L + +L D+M
Sbjct: 368 GLCKTNKVHDARVLFDRM 385
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 153/286 (53%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G P + +L LC+ V A QFFD+ ++P V Y+ L+ L G+
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KLF +++ + D + +NS+L + + N+DEA M ++M + G P+ +YSI
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + +VL+ M + VP+V TYN ++ LCK V++A++L M++ G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SY+ +L C +V+ A L RM + ++PD T+N+++ L + G+ D A
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ + M G P Y+ +++GL +K+G+ +A + + M ++G
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGL-RKQGRHIQADRLTQAMKEKG 459
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 148/267 (55%), Gaps = 5/267 (1%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
E +P T+ ++++ G+L + KLF++ML+ D + +N L++ K G +DEA
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ + EM S+G EP ++Y+ ++AFC+ + + +M P+V TY+ II
Sbjct: 63 NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 159 LCKNEKVEEAYQLL-DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
LCK KV EA ++L +MIERG + + +YNA++ C + A +L+ M + +P
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D TYN +L L R+G+ A + ++SM RG+ P V Y+ ++ L K+GK +EA K
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL-YKEGKTDEAMKL 241
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLG 304
F+ ++ +G P + T + L+GL
Sbjct: 242 FKDVIAKGYMPDTVTYNSI---LLGLA 265
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + LL AL K A + F D + P TY+ ++ GL + EA
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++F +M+ C + ++ +L C+A +D+AH +L EM IGA PD +Y+I +
Sbjct: 274 EEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 333
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ N + + +M P++ +Y+ ++ LCK KV +A L D MIER PD
Sbjct: 334 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 393
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ C +++ A L+ +MT PD YN ++ L + GR +A + +
Sbjct: 394 VVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQ 453
Query: 244 SMEKRGF 250
+M+++GF
Sbjct: 454 AMKEKGF 460
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
R+C + +L++ CK G + + + + +M G PD Y+I I + + +
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
R+ + M L P+++TYN ++ CK K++EA +L M E+G PD +Y+ I++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 193 YHCDRAEVNMALR-LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C +V AL L +M + + YN ++ L + +RA ++ E M +G+
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P TY+ ++ GLC + GK+ EA ++F+ M G P
Sbjct: 182 PDNITYNTILSGLC-RMGKVSEAKQFFDSMPSRGYSP 217
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + + LL LCK V AH+ F + P + +YS+++ GL +
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR LFD M+ERK D++ N L++ +CKAG +DEA +L +M G PD +Y+
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
++ + R+ +MK + + F
Sbjct: 435 LMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 174/325 (53%), Gaps = 12/325 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL LCK ++KVA + F+ K F P V+ Y++L+ G +G + A + EM E
Sbjct: 180 LLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGI 239
Query: 76 PVDILAHNSLLEAMCKAGNID----------EAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+++ +N LL+ +C+ + +A + EMR G EPD S+SI +H +
Sbjct: 240 EANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYS 299
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A+ L M+ + P V TY +++ LC ++++A +LL++M+ G +P+
Sbjct: 300 RAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAA 359
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVM-PDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN + R + AL+L ++ +EN+ P HTYN++L + +++ RF+ E+W
Sbjct: 360 TYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWND 419
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ G P + +Y+++VHGLC+K+ K ++AC++F M+++G+ P +T EML L+
Sbjct: 420 LRSSGSGPDLDSYTLLVHGLCEKQ-KWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSN 478
Query: 305 FLDIIEILADKMERSTSCTIQELAN 329
L L K++ + E +N
Sbjct: 479 MLRTWRRLKKKLDEESIAFGSEFSN 503
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF----------FDNAKHE-FTPTVKTYSI 49
M E GI+ ++ + LL +C+R ++ +F FD + + P V ++SI
Sbjct: 234 MDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSI 293
Query: 50 L--VRGLGDVGELS-EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
L V +L+ + KL +EM CP + + S+L+ +C G ID+A +L +M
Sbjct: 294 LLHVYSRAHKPQLTVDKLKLMEEM--GICPT-VATYTSVLKCLCSCGRIDDAEELLEQMV 350
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNCIIRKLCKNEKV 165
G P+A +Y+ F + D + ++ +++ NL P+V TYN ++ K +
Sbjct: 351 RNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRF 410
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++ +++ G+ PD SY ++ C++ + A + M ++ ++P + T+ M+
Sbjct: 411 NIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEML 470
Query: 226 LKLLVRVGRFDRATEVWESMEKR 248
L++ W ++K+
Sbjct: 471 YAGLIQ----SNMLRTWRRLKKK 489
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 15/193 (7%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y++ I + ++++ M + NL PN T+ +IR+L +A + D+M
Sbjct: 105 TYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDM 164
Query: 176 ---IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
I N + + +L C + +A+ + + K +P+ Y +++ ++
Sbjct: 165 ESFIAETVNQTHFCF--LLDTLCKYGYIKVAVEVFNK-RKFRFLPNVRIYTVLIYGWCKI 221
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK-----KGKLE----EACKYFEMMVD 283
GR D A M++ G +V TY+V++ G+C++ +G+ E +A K F+ M
Sbjct: 222 GRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQ 281
Query: 284 EGIPPYSSTVEML 296
+GI P ++ +L
Sbjct: 282 KGIEPDVTSFSIL 294
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 155/293 (52%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV++G+ P + L++ LCK +K A D P V Y+ LV G G+
Sbjct: 306 MVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGK 365
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA + +EM+ + + +++L+ +CK G + A +L EM +G PD F+Y
Sbjct: 366 AAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHP 425
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + D F +L+ M+ ++PN +TY +I LC+N + +EA LL+EMI G
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y ++ H +++A + MTK NV+PD YN ++K L VGR + A
Sbjct: 486 LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE 545
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
E + ++KRG P TYS ++HG CK + LE+A + + M++ G+ P + T
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTR-NLEKADQLLQQMLNSGLKPNADT 597
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 4/347 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP+ + L+ K H+ +A + +N K P + Y+ L++GL VG
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + + ++ +R D ++ L+ CK N+++A +L++M + G +P+A +Y+
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + ++ND V +L SM P+ Y +IR L ++E +E A+ +L E+ + G
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y+++++ C A++ A+ L+ M KE + P YN ++ R G RA
Sbjct: 661 LVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 720
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V++S+ +G P+ TY+ ++ G C K G + +A ++ M+D GI P + +L
Sbjct: 721 NVFDSILAKGLLPNCVTYTALIDGNC-KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
L+ L ++M + + +RG ++ R +ETE
Sbjct: 780 CSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFC--KRGRLQETE 824
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
GI P +Y L A CK + A + F+ + + TY++++ GL G + EA
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+EM++ D + +L+ +CK G + EA +L EM G +P+ Y+ +
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + F +L+ M + PN Y+ +IR LCK ++ A +LL+EMI+ G PD
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y+ ++ H + + A L+ M ++P+ +TY +++ L + G A + E
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M G P+ Y+ ++ G K+G + AC+ E M + P Y+S ++ L
Sbjct: 480 EMISEGLKPNAFMYAPLIIGH-SKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 3/291 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+H CK ++++ A Q + P TY+ L+ G + +
Sbjct: 555 GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ML D + ++ + ++ N++ A +L E+ G PD YS I
Sbjct: 615 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 674
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ +LD M + L P + YN +I C++ + A + D ++ +G P+
Sbjct: 675 LCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPN 734
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ +C ++ A L M + PD YN++ ++A + E
Sbjct: 735 CVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 794
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
M RG Y VS +S +V G CK+ G+L+E K +M+D I P + TVE
Sbjct: 795 EMFNRG-YAHVSLFSTLVRGFCKR-GRLQETEKLLHVMMDREIVPNAQTVE 843
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G +P + L+ + A + + ++ P TY I++ GL GE
Sbjct: 411 MIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE 470
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM+ + + L+ K G+I A L M PD F Y+
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNS 530
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I I +++ LVP+ FTY+ +I CK +E+A QLL +M+ G
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +L + + ++ M PD H Y +V++ L R + A
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V +EK G P + YS ++ GLC K +E+A + M EG+ P
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLC-KMADMEKAVGLLDEMAKEGLEP 698
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 130/312 (41%), Gaps = 37/312 (11%)
Query: 13 LDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
LD L+ K V+ A Q PT + + L++ L + KL M
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
P D+ +++ LEA CKA + D A + EMR + +Y++ I C + +
Sbjct: 238 GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 297
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
F + M Y L P+ FTY ++ LCK +++EA LLDEM G P+ Y ++
Sbjct: 298 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLV 357
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT------------ 239
+ A ++ M V P++ Y+ +++ L ++G+ RA+
Sbjct: 358 DGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417
Query: 240 -----------------------EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
E+ M G P+ TY +M++GLC + G+ +EA
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLC-QNGESKEAGN 476
Query: 277 YFEMMVDEGIPP 288
E M+ EG+ P
Sbjct: 477 LLEEMISEGLKP 488
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 38/304 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP+ LL K H KV+ P Y I++R L
Sbjct: 586 MLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 645
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + E+ + D+ ++SL+ +CK ++++A G+L EM G EP Y+
Sbjct: 646 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNA 705
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + DI V DS+ L+PN TY +I CKN + +A+ L +M++RG
Sbjct: 706 LIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRG 765
Query: 180 ANPDEWSYNAILAYHC-DRAEVNMAL---------------------------------- 204
PD + YN +LA C D A++ AL
Sbjct: 766 IAPDAFVYN-VLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETE 824
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW-ESMEKRGFYPSVSTYSVMVHG 263
+L+ M ++P+ T V+ + G+ A V+ E +K+ S +S++
Sbjct: 825 KLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTD 884
Query: 264 LCKK 267
+ K
Sbjct: 885 MINK 888
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 14/311 (4%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARK 65
PS +L +LC H A+ H P V + + R + D S+AR
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLV--LASIQRAIQD----SDARS 166
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+D+L ++ K G++ A ++ M +G P + +
Sbjct: 167 PSPSPSHSTAVLDVL-----VDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLL 221
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A+ + V+++ M+ + P+V+TY+ + CK + A ++ +EM R +E
Sbjct: 222 RADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEV 281
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN +++ C V A M + PD TY ++ L + GR A + + M
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
G P+V Y+ +V G K+GK EA M+ G+ P + L L +G
Sbjct: 342 SCSGLKPNVVVYATLVDGF-MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ 400
Query: 306 LDIIEILADKM 316
L L ++M
Sbjct: 401 LGRASKLLNEM 411
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 21/288 (7%)
Query: 8 PSIYDLDQLLHALCKRKHV---KVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
PS D + +C+R H K+ FF ++ P + ++ L L +A
Sbjct: 75 PSRLSPDAVSCLICRRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASHFPQA 134
Query: 64 RKLFDEMLERKCPVDILAHNS---LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
L +M ILAH +L ++ +A +A A D +
Sbjct: 135 NGLLHQM--------ILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAVLD-----VL 181
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + + + +V+ M L P N +++ L + + +E ++L M G
Sbjct: 182 VDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGI 241
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD ++Y+ L HC + + A ++ M + + + TYN+++ L R G + A
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 301
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E M G P TY +++GLC K G+L+EA + M G+ P
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLC-KGGRLKEAKALLDEMSCSGLKP 348
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 168/311 (54%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE + P+ + L+ CK +++ A + F+ + + PTV TY+ LV GL + G+
Sbjct: 294 MVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGK 353
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA+ L DEML +++ +N+L+ CK ++EA + + G P+ +++
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C+ + F + M +PN TYNC+I C+ K+EE LL+EM RG
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN +++ C++ E A RLI M + + P TYN++L G A
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + MEK G + +V TY+V++ G C +KGKLE+A M+++G+ P +T E+++
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYC-RKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEE 592
Query: 300 LVGLGFLDIIE 310
++ GFL IE
Sbjct: 593 MMEKGFLPDIE 603
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 163/322 (50%), Gaps = 5/322 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRG---LGD 56
M+ I P++ + +++ LCK + A D+ K F P V TY+ L+ G +G
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG++ +A + EM+E K + + N L++ CK N+ A + EM+S G +P +
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ ++ C ++ +LD M NL PNV TYN +I CK + +EEA +L D +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++G P+ ++N +L +C ++ A L M ++ +P+ TYN ++ R G+ +
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M+ RG TY++++ C+KK + ++A + + M+D+G+ P T +L
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKK-EPKKAARLIDEMLDKGLKPSHLTYNIL 519
Query: 297 RNRLVGLGFLDIIEILADKMER 318
N G L L +ME+
Sbjct: 520 LNGYCMEGNLRAALNLRKQMEK 541
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 151/287 (52%), Gaps = 5/287 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
D L+ A + + + F A + + +V + + L+ L E ++ EM+
Sbjct: 164 DMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIR 223
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
RK +++ N+++ +CK G +++A ++ +M+ G P+ +Y+ I +C+ +
Sbjct: 224 RKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGK 283
Query: 133 VFR---VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+++ +L M + PN T+N +I CK+E + A ++ +EM +G P +YN+
Sbjct: 284 MYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNS 343
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C+ ++N A L+ M N+ P+ TYN ++ + + A E+++++ K+G
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P+V T++ ++HG C K GK+EEA ++M+++G P +ST L
Sbjct: 404 LTPNVITFNTLLHGYC-KFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ G+KPS + LL+ C +++ A + E V TY++L++G G+
Sbjct: 504 MLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGK 563
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
L +A L +EMLE+ + + + E M + G + + G L
Sbjct: 564 LEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHL 606
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 165/303 (54%), Gaps = 3/303 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P Y LL ALCK VK A F++ + F P ++ ++ L+ G G++
Sbjct: 226 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKI 285
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + ++ E DI+ +N+LL +AG + +A +L EM+ + P+A S++I
Sbjct: 286 MEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTIL 345
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +FC+ + R+ M+ +V TY +I CK ++AY++LD+MI++G
Sbjct: 346 IQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGH 405
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P + SY I+ H + E+ + LI M K +PD + YN +++L+ ++G A
Sbjct: 406 DPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVR 465
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLRN 298
+W M+ G P + TY +MVHG +G L EAC YF+ MV+ G+ P T++ L N
Sbjct: 466 LWGEMQAGGLNPGLDTYILMVHGFL-SQGCLVEACDYFKEMVERGLLSAPQYGTLKELTN 524
Query: 299 RLV 301
L+
Sbjct: 525 ALL 527
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 8/242 (3%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---HAFCEANDIHSVFRVLD 138
+ ++++ + K ++ EMR P + +FI F + VLD
Sbjct: 167 YKAMIKTLGKMRQFGAVWALIEEMRK--ENPYMLTPEVFIVLMRRFASVRMVKKAVEVLD 224
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M +Y P+ + + C++ LCKN V+EA L ++M R NP+ + ++L C
Sbjct: 225 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREG 283
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++ A ++ ++ + PD YN +L + G+ A ++ M+K P+ ++++
Sbjct: 284 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 343
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
+++ CK + K++EA + F M G T L + G D EIL D ++
Sbjct: 344 ILIQSFCKTE-KMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 402
Query: 318 RS 319
+
Sbjct: 403 KG 404
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G P + + ++ +CK +K A + + + P + TY ++V G G
Sbjct: 435 MRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGC 494
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLE---AMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
L EA F EM+ER + + +L E A+ +A ++ A M M + G E + +
Sbjct: 495 LVEACDYFKEMVERGL-LSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSA 553
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++I+IHA + M +L+P T+ ++R L K
Sbjct: 554 WTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKK 598
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 165/303 (54%), Gaps = 3/303 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P Y LL ALCK VK A F++ + F P ++ ++ L+ G G++
Sbjct: 203 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKI 262
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + ++ E DI+ +N+LL +AG + +A +L EM+ + P+A S++I
Sbjct: 263 MEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTIL 322
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +FC+ + R+ M+ +V TY +I CK ++AY++LD+MI++G
Sbjct: 323 IQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGH 382
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P + SY I+ H + E+ + LI M K +PD + YN +++L+ ++G A
Sbjct: 383 DPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVR 442
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLRN 298
+W M+ G P + TY +MVHG +G L EAC YF+ MV+ G+ P T++ L N
Sbjct: 443 LWGEMQAGGLNPGLDTYILMVHGFL-SQGCLVEACDYFKEMVERGLLSAPQYGTLKELTN 501
Query: 299 RLV 301
L+
Sbjct: 502 ALL 504
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 8/242 (3%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---HAFCEANDIHSVFRVLD 138
+ ++++ + K ++ EMR P + +FI F + VLD
Sbjct: 144 YKAMIKTLGKMRQFGAVWALIEEMRK--ENPYMLTPEVFIVLMRRFASVRMVKKAVEVLD 201
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M +Y P+ + + C++ LCKN V+EA L ++M R NP+ + ++L C
Sbjct: 202 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREG 260
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++ A ++ ++ + PD YN +L + G+ A ++ M+K P+ ++++
Sbjct: 261 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 320
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
+++ CK + K++EA + F M G T L + G D EIL D ++
Sbjct: 321 ILIQSFCKTE-KMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 379
Query: 318 RS 319
+
Sbjct: 380 KG 381
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G P + + ++ +CK +K A + + + P + TY ++V G G
Sbjct: 412 MRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGC 471
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLE---AMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
L EA F EM+ER + + +L E A+ +A ++ A M M + G E + +
Sbjct: 472 LVEACDYFKEMVERGL-LSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSA 530
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++I+IHA + M +L+P T+ ++R L K
Sbjct: 531 WTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKK 575
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 158/289 (54%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G+KP I + +L LC+ A + F P V++++IL+ G VGE
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K++ EM R D+++ + L+ + G +D A LREMR G PD Y++
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + RV D M +P+V TYN ++ LCK ++ +A LL+EM ERG
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ +C +++ AL+L M + + PD TYN ++ + R G D+A
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++W+ M R +P+ TYS+++ C +KG++E+A + + M+++GI P
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHC-EKGQVEDAFGFLDEMINKGILP 443
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 149/286 (52%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + LL+ LCK + + A + + P + T++ L+ G G+
Sbjct: 296 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 355
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +LFD ML ++ DI+ +N+L++ MC+ G++D+A+ + +M S P+ +YSI
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE + F LD M ++PN+ TYN II+ C++ V + + L +M+
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN ++ + +++ A +L+ M KE V PD TYNM++ G A
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++E M +G P TY M++G G +EA + + M+ G
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHV-TAGNSKEAFQLHDEMLQRG 580
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + L+ +R + A + + P Y++++ G G +S+A
Sbjct: 230 GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ DEM+ C D++ +N+LL +CK + +A G+L EMR G PD +++ IH
Sbjct: 290 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 349
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + ++ D+M L P++ TYN +I +C+ +++A L D+M R P+
Sbjct: 350 YCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPN 409
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ HC++ +V A + M + ++P+ TYN ++K R G + + +
Sbjct: 410 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 469
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M P + TY+ ++HG K+ K+ +A K MM E + P T ML N
Sbjct: 470 KMMVNKVSPDLITYNTLIHGYIKED-KMHDAFKLLNMMEKEKVQPDVVTYNMLIN 523
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 2/309 (0%)
Query: 9 SIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+ Y L+ ++H CK KV + K P V T++++V G+ A L
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
D M+ + I+ +NS+L+ +C++G D+A + +EM G PD S++I I FC
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+I ++ M+ + P++ +++C+I + K++ A L EM G PD Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C ++ ALR+ M +PD TYN +L L + R A + M +
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RG P + T++ ++HG C +GKL++A + F+ M+++ + P T L + + G LD
Sbjct: 334 RGVPPDLCTFTTLIHGYC-IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 392
Query: 308 IIEILADKM 316
L D M
Sbjct: 393 KANDLWDDM 401
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + +L+R + EA + F +L+ + P+ A N+LL A+ +AG A
Sbjct: 22 TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
R + S +E + ++ +I +H +C+A + V V+ M++ + P+V T+N ++
Sbjct: 82 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ E A L+D M+ +G P +YN++L C + A + M V PD
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++ +++ RVG + A ++++ M RG P + ++S ++ GL ++GK++ A Y
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMAYLRE 260
Query: 281 MVDEGIPP 288
M G+ P
Sbjct: 261 MRCFGLVP 268
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 163/299 (54%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV G+KP I + +L LC+ A + F P V++++IL+ G VGE
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K++ EM R D+++ + L+ + G +D A LREMR G PD Y++
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + RV D M +P+V TYN ++ LCK ++ +A LL+EM ERG
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ +C +++ AL+L M + + PD TYN ++ + R G D+A
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
++W+ M R +P+ TYS+++ C +KG++E+A + + M+++GI P Y+S ++
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHC-EKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + LL+ LCK + + A + + P + T++ L+ G G+
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +LFD ML ++ DI+ +N+L++ MC+ G++D+A+ + +M S P+ +YSI
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE + F LD M ++PN+ TYN II+ C++ V + + L +M+
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN ++ + +++ A +L+ M KE V PD TYNM++ G A
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M +G P TY M++G G +EA + + M+ G P
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHV-TAGNSKEAFQLHDEMLQRGFAP 644
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + L+ +R + A + + P Y++++ G G +S+A
Sbjct: 291 GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 350
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ DEM+ C D++ +N+LL +CK + +A G+L EMR G PD +++ IH
Sbjct: 351 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 410
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + ++ D+M L P++ TYN +I +C+ +++A L D+M R P+
Sbjct: 411 YCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPN 470
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ HC++ +V A + M + ++P+ TYN ++K R G + + +
Sbjct: 471 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 530
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M P + TY+ ++HG K+ K+ +A K MM E + P T ML N
Sbjct: 531 KMMVNKVSPDLITYNTLIHGYIKED-KMHDAFKLLNMMEKEKVQPDVVTYNMLIN 584
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 2/309 (0%)
Query: 9 SIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+ Y L+ ++H CK KV + K P V T++++V G+ A L
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
D M+ + I+ +NS+L+ +C++G D+A + +EM G PD S++I I FC
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+I ++ M+ + P++ +++C+I + K++ A L EM G PD Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C ++ ALR+ M +PD TYN +L L + R A + M +
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RG P + T++ ++HG C +GKL++A + F+ M+++ + P T L + + G LD
Sbjct: 395 RGVPPDLCTFTTLIHGYC-IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 453
Query: 308 IIEILADKM 316
L D M
Sbjct: 454 KANDLWDDM 462
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P I + L+ +C++ + A+ +D+ E P TYSIL+ + G++ +A
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
DEM+ + +I+ +NS+++ C++GN+ + L++M PD +Y+ IH +
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + +H F++L+ M++ + P+V TYN +I + V+EA + ++M +G PD
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++Y +++ H A +L M + PD
Sbjct: 612 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + +L+R + EA + F +L+ + P+ A N+LL A+ +AG A
Sbjct: 83 TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
R + S +E + ++ +I +H +C+A + V V+ M++ + P+V T+N ++
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ E A L+D M+ +G P +YN++L C + A + M V PD
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++ +++ RVG + A ++++ M RG P + ++S ++ GL ++GK++ A Y
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMAYLRE 321
Query: 281 MVDEGIPP 288
M G+ P
Sbjct: 322 MRCFGLVP 329
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 158/296 (53%), Gaps = 16/296 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--------TPTVKTYSILVR 52
M G+KP I + +L LCK H+ FD AK F P V++++IL+
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCK-------HRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G VGE+ EA K + EM R D+++ + L+ + G +D A LREM+ +G P
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D Y++ I FC A + RV D M + +P+V TYN ++ LCK ++ +A +LL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+EM ERG PD ++ ++ +C + AL+L + ++ + PD TYN ++ + R
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G +A E+W+ M R P+ TYS+++ C +KG++E+A + + MV +G P
Sbjct: 451 GDLAKANELWDDMHAREILPNHITYSILIDSHC-EKGQVEDAFGFLDEMVKKGNLP 505
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 161/334 (48%), Gaps = 37/334 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILV-------- 51
M + + P + + L+ C+ VK A +F+ +H + TP V ++S L+
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGE 312
Query: 52 -----------RGLGDV----------------GELSEARKLFDEMLERKCPVDILAHNS 84
+GLG V G +SEA ++ DEM+ C D++ +N+
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNT 372
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
LL +CK + +A +L EM G PD +++ IH +C + + ++ D++ R
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L P+V TYN +I +C+ + +A +L D+M R P+ +Y+ ++ HC++ +V A
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF 492
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K+ +P+ TYN ++K R G + + + M + +P + T++ ++HG
Sbjct: 493 GFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
K++ + A F +M E + P + T M+ N
Sbjct: 553 IKEE-NMHGAFNVFNIMEKEMVRPDAVTYNMIIN 585
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV FG P + + LL+ LCK+ + A + + + TP + T++ L+ G G
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGN 417
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +LFD +L ++ D++ +NSL++ MC+ G++ +A+ + +M + P+ +YSI
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI 477
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE + F LD M + +PN+ TYN II+ C++ V++ Q L +M +
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ + ++ A + M KE V PD TYNM++ G A
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAG 597
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V++ M G P TY +++G G ++A + + M+ G P
Sbjct: 598 RVFKGMGDSGIEPDRYTYMSLINGHV-TAGNSKQAFQLHDEMIHRGFAP 645
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDE 69
Y L+ ++H+ CK A K P V T+++L+ G++ A L D
Sbjct: 158 YTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M R I+ +NS+L+ +CK D+A + R M PD S++I I FC +
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ + M+ + P+V +++C+I + +++ A L EM G PD Y
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ ALR+ M +PD TYN +L L + R A ++ ME+RG
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
P + T++ ++HG C ++G E A + F+ ++ + + P Y+S ++
Sbjct: 398 VTPDLCTFTTLIHGYC-RQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + +L+R + EA + F +L+ + PV A N+LL + +AG A
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
R + S +E +A++ +I +H++C+ + V+ M++ + P+V T+N +I
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ V+ A L+D M RG P +YN++L C + A + M + +V PD
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++N+++ RVG A + ++ M+ R P V ++S ++ GL ++G+++ A Y
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GLFSRRGEMDHAGAYLRE 322
Query: 281 MVDEGIPP 288
M G+ P
Sbjct: 323 MKGLGLVP 330
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P + + L+ +C++ + A++ +D+ E P TYSIL+ + G++ +A
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF 492
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
DEM+++ +I +NS+++ C++GN+ + L++MR PD +++ IH +
Sbjct: 493 GFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ ++H F V + M++ + P+ TYN II + +++A ++ M + G PD
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDR 612
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++Y +++ H A +L M PD
Sbjct: 613 YTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ----LLDE--------------MIE 177
++ S+ + P ++ +IR ++ K EA++ LLD ++
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133
Query: 178 RGANP-----------------DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
R P + ++ N ++ +C E + A +I+ M K V PD
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
T+N+++ R G D A + +SM RG P + TY+ ++ GLCK + + ++A + F
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR-RFDKAKEVFRT 252
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
M + P + N L+G GF + E+
Sbjct: 253 MDQCSVAPDVRSF----NILIG-GFCRVGEV 278
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 12/336 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G K I D LL LCK +VKVA + F+ K EF VK Y+IL+ G +G A
Sbjct: 164 GNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAE 223
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDA 114
+ +M+ER +++ +N LL +C+ + I A + EMR G EPD
Sbjct: 224 RFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDV 283
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
S+SI +H + A+ L MK + P V TY +I+ LC ++E+ L++E
Sbjct: 284 TSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEE 343
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-MPDRHTYNMVLKLLVRVG 233
M+ G +P +YN + R + ALRL +M ++ + P HTYN++L L + +
Sbjct: 344 MVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLD 403
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ + E+W M++ G P + +Y+ ++HGLC+K+ + EAC++F M++ G P T
Sbjct: 404 KKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQ-RWSEACQFFVEMIERGFLPQKVTF 462
Query: 294 EMLRNRLVGLGFLDIIEILADKMERSTSCTIQELAN 329
EML L+ L L K+E + EL N
Sbjct: 463 EMLYRGLIQSDMLRTWRRLKKKLEEESKTYGSELKN 498
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 35/300 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE GI+P++ + LL+ +C+R + +F +H
Sbjct: 229 MVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRH---------------------- 266
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+FDEM +R D+ + + +L +A + + L++M+ +G P +Y+
Sbjct: 267 --AEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSV 324
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG- 179
I C + +++ M R + P+ TYNC ++ + A +L +M E
Sbjct: 325 IKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCL 384
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN +LA + + L M + V PD +Y ++ L R+ A
Sbjct: 385 CAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEAC 444
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK---------KGKLEEACK-YFEMMVDEGIPPY 289
+ + M +RGF P T+ ++ GL + K KLEE K Y + + I PY
Sbjct: 445 QFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESKTYGSELKNYHIKPY 504
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 16/296 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--------TPTVKTYSILVR 52
M G+KP I + +L LCK H+ FD AK F P V++++IL+
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCK-------HRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G VGE+ EA K + EM +R D+++ + L+ G +D A LREM+ +G P
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D Y++ I FC A + RV D M +P+V TYN ++ LCK ++ +A +LL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+EM ERG PD ++ ++ +C AL+L + + + PD YN ++ + R
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G +A E+W+ M R +P+ TYS+++ C +KG++EEA + + MV +G P
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHC-EKGQVEEAFGFLDEMVSKGNLP 505
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + LL+ LCK+ + A + + K TP + T++ L+ G G
Sbjct: 358 MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGN 417
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LFD +L ++ D++A+NSL++ MC+ G++ +A+ + +M + P+ +YSI
Sbjct: 418 FEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSI 477
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE + F LD M +PN+ TYN II+ C++ V++ Q L +M++
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ + ++ A + M KE V PD TYNM++ G + A
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V++ M G P TY +++G G +EA + + M+ G P
Sbjct: 598 RVFKKMGASGIEPDRYTYMSLINGHV-TAGNSKEAFQLHDEMMHRGFAP 645
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G+ P + L+ R + A + K P Y++++ G G
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA ++ DEM+ C D++ +N+LL +CK + +A +L EM+ G PD +++
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK-------NE--------- 163
IH +C + ++ D++ L P+V YN +I +C+ NE
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 164 -------------------KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+VEEA+ LDEM+ +G P+ +YN+I+ +C V
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ + +M ++N++PD T+N ++ ++ A V+ MEK P TY+++++G
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++G +EEA + F+ M GI P T L N V G
Sbjct: 588 -SEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAG 626
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 6/289 (2%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDE 69
Y L+ ++H+ CK A K P V T+++L+ G++ A L D
Sbjct: 158 YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M + I+ NS+L+ +CK D+A + R M PD S++I I FC +
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ + M++ + P+V +++C+I K++ A L EM G PD Y
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ ALR+ M +PD TYN +L L + R A E+ M++RG
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
P + T++ ++HG C + G E+A + F+ ++ + + P Y+S ++
Sbjct: 398 VTPDLCTFTTLIHGYC-RDGNFEKALQLFDTLLHQRLRPDVVAYNSLID 445
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P + + L+ +C++ + A++ +D+ E P TYSIL+ + G++ EA
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
DEM+ + +I+ +NS+++ C++GN+ + L++M PD +++ IH +
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ ++H F V + M++ + P+ TYN II + +EEA ++ +M G PD
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++Y +++ H A +L M PD
Sbjct: 613 YTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 5/282 (1%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + + +L V+ N ++ + CK+ D+A ++ EM PD ++++ I
Sbjct: 141 AEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID 200
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A A D+ + ++DSM L P + T+N +++ LCK+ + ++A ++ M + P
Sbjct: 201 ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP 260
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D S+N ++ C EV A++ M + V PD +++ ++ L G+ D A
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL 320
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M+ G P Y++++ G C + G + EA + + MV G P T L N L
Sbjct: 321 REMKGLGLVPDGVIYTMVIGGFC-RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 303 LG-FLDIIEILADKMERSTS---CTIQELANAMRGKTGFRKS 340
LD E+L + ER + CT L + F K+
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKA 421
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 140/282 (49%), Gaps = 17/282 (6%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + +L+R + EA + F +L+ + PV A N+LL A+ +AG A
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
R + S +E +A++ +I +H++C++ + V+ M++ + P+V T+N +I
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ V+ A L+D M +G P ++N++L C + A + M + +V PD
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++N+++ RVG + A + ++ M++RG P V ++S ++ GL +GK++ A Y
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGKMDHAAAYLRE 322
Query: 281 MVDEGIPP--------------YSSTVEMLRNR--LVGLGFL 306
M G+ P S E LR R +VGLG L
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ----LLDEMIE-------------- 177
++ S+ + P ++ +IR ++ K EA++ LLD +
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133
Query: 178 RGANP-----------------DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
R P + ++ N ++ +C E + A +I+ M K V PD
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
T+N+++ R G D A + +SM +G P + T++ ++ GLCK + + ++A + F
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHR-RFDKAKEVFRA 252
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
M + P + N L+G GF + E+
Sbjct: 253 MDQCSVAPDVRSF----NILIG-GFCRVGEV 278
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 168/334 (50%), Gaps = 12/334 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
K + D LL LCK HV++A + F+ KH F PTVK Y++L+ G +G + A+
Sbjct: 170 KTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGRIKTAQSF 229
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKA----------GNIDEAHGMLREMRSIGAEPDAFS 116
+EM+++ +++ +N LL +C+ I A + +MR G EPD S
Sbjct: 230 LNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTS 289
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+SI +H + A+ V L MK + PNV Y +I+ L +E+A +LL EM+
Sbjct: 290 FSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMV 349
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-MPDRHTYNMVLKLLVRVGRF 235
G +P +YN R + ALR+ RM ++ + MP HTY +++++ +R+
Sbjct: 350 RDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMI 409
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
E+W+ M++ G P + Y+V++HGLC+++ + EAC YF M++ G P T E
Sbjct: 410 KVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQ-RWREACHYFVEMIENGFLPLKGTFES 468
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSCTIQELAN 329
L L+ L L K++ + E N
Sbjct: 469 LYRGLIQADMLRTWRRLKKKLDEESITFGSEFQN 502
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR----------KHVKVAHQFFDNAKHE-FTPTVKTYSI 49
M++ GI+P++ + LL+ +C++ + ++ A + FD + P V ++SI
Sbjct: 233 MIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSI 292
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L+ + M E+ +++ + S+++ + G +++A +L EM G
Sbjct: 293 LLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDG 352
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL-VPNVFTYNCIIRKLCKNEKVEEA 168
P A +Y+ F F D S R+ MK L +P+ TY +IR + + ++
Sbjct: 353 VSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMIKVV 412
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++ +M E GA PD Y ++ C+R A M + +P + T+ + +
Sbjct: 413 KEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLPLKGTFESLYRG 472
Query: 229 LVRVGRFDRATEVWESMEKR 248
L++ W ++K+
Sbjct: 473 LIQADML----RTWRRLKKK 488
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 161/301 (53%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P + L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 211 LLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGN 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M+++ C +++A+N++++++CK + EA + EM + G PD F+Y+
Sbjct: 271 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNS 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M ++PNV ++ ++ LCK + A+ ++D MI+RG
Sbjct: 331 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y A++ HC R+E++ A+++ M + +P+ +YN+++ ++ R D+A
Sbjct: 391 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 450
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M +G TY+ ++HGLC G+L+ A F MV G P T +L +
Sbjct: 451 GLLEQMSLQGLIADTVTYNTLIHGLC-HVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 509
Query: 300 L 300
L
Sbjct: 510 L 510
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS D +LL ++ K KH P V T +IL+ + L A +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ C D N+L+ +C G I EA + + G +PD +Y ++ C+
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + R+L SM + N PNV YN II LCK+ +V EA+ L EMI +G +PD ++
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN+++ C+ E L+ M +MP+ ++ V+ L + G A +V + M
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
KRG P V TY+ ++ G C + +++EA K F+ MV +G P + +L N
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRS-EMDEAVKVFDTMVHKGCVPNVRSYNILIN 438
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 146/288 (50%), Gaps = 6/288 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M+ GI P I+ + L+HALC + KHV N+K P V +S +V L
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK--IMPNVVVFSTVVDALCKE 373
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G ++ A + D M++R D++ + +L++ C +DEA + M G P+ SY
Sbjct: 374 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I+ +C+ + +L+ M L+ + TYN +I LC +++ A L EM+
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 493
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y +L Y C + A+ L+ + N+ D YN+ + + R G +
Sbjct: 494 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 553
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A +++ ++ +G P V TY++M+HGLC K+G L+EA K F M + G
Sbjct: 554 ARDLFSNLSSKGLQPDVRTYNIMIHGLC-KRGLLDEANKLFRKMDENG 600
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 16/319 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV I P++ ++ ALCK + +AH D K P V TY+ L+ G E
Sbjct: 351 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 410
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+FD M+ + C ++ ++N L+ C+ +D+A G+L +M G D +Y+
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + M +P++ TY ++ LCKN + EA LL +
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D YN + C E+ A L + ++ + + PD TYN+++ L + G D A
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST----VEM 295
+++ M++ G Y+ ++ G + A + + M+ EG ST VEM
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSNETF-GATQLLQEMLAEGFSADVSTTTLIVEM 649
Query: 296 L----------RNRLVGLG 304
L R RL G+G
Sbjct: 650 LSDDGLDQSFERLRLRGVG 668
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P + LL ++ K + + +M S G PD ++ +I
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC + F VL + + P+ T+N +IR LC K+ EA L D+ I G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ C + A+RL+ M ++N P+ YN ++ L + + A
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +G P + TY+ ++H LC + + MV+ I P + +
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALC-NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369
Query: 300 LVGLGFLDIIEILADKM 316
L G + I + D M
Sbjct: 370 LCKEGMIAIAHDVVDMM 386
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 4/305 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P Y LL ALCK VK A F++ + F+P+++ ++ L+ G G+L
Sbjct: 202 MPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFSPSLRHFTSLLYGWCREGKL 261
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M E DI+ N+LL A AG + +A +L+EM G EP+A SY+I
Sbjct: 262 IEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIM 321
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I AFC + RV M+R +V TY +I CK K+ YQ+LD M ++G
Sbjct: 322 IQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGH 381
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ +Y IL H + E+ L LI M +PD YN+V++L ++G + +
Sbjct: 382 MPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACKLGEVKQGVQ 441
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTVEMLR 297
+W ME F P + T+ +M+HG +G L EAC+YF+ M+ G+ P Y E+L
Sbjct: 442 IWNEMEASDFSPELDTFVIMIHGFL-GQGCLVEACEYFKEMIGRGLLTTPQYGILKELLN 500
Query: 298 NRLVG 302
L G
Sbjct: 501 ALLRG 505
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ + I F A + VLD M +Y P+ + + C++ LCKN V++A L ++M
Sbjct: 179 FIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMR 238
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
R +P + ++L C ++ A ++ +M + PD +N +L G+
Sbjct: 239 VR-FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMT 297
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A ++ + M ++G P+ ++Y++M+ C ++ K++EA + F M G
Sbjct: 298 DAFDLLKEMVRKGCEPNANSYTIMIQAFCSQE-KMDEAMRVFVEMERTG 345
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + ++ CK VK Q ++ + +F+P + T+ I++ G G L EA
Sbjct: 415 GCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEA 474
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI----GAEPDAFSYSI 119
+ F EM+ R + +L+ + A E GM +++ S G E +A +++I
Sbjct: 475 CEYFKEMIGRG--LLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTI 532
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+IH+ + M +++P T+ ++R L K
Sbjct: 533 WIHSLFSNGHVKEACSYCLDMMEADIMPKPETFAKLMRGLRK 574
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 166/325 (51%), Gaps = 12/325 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL LCK +VKV + F+ KH F+P VK Y++L+ G +G + A + E ER
Sbjct: 217 LLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERGI 276
Query: 76 PVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++ +N LL +C+ + I A + EMR G EPD S+SI +H +
Sbjct: 277 EATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVYS 336
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A+ L MK + P+V TY +++ LC ++E+A +LL EM+ G +
Sbjct: 337 RAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAV 396
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMP-DRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN + R + AL+L +M ++ + H+YN++L++ + + R D E+WE
Sbjct: 397 TYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWED 456
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++ G P + +Y++++HGLC+K+ K EACK+F M+++G+ P T E L L+
Sbjct: 457 LKSSGLGPDLDSYTMLIHGLCEKE-KWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSD 515
Query: 305 FLDIIEILADKMERSTSCTIQELAN 329
L L K++ + E N
Sbjct: 516 MLRTWRRLKKKLDEESITFGSEFQN 540
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 46/252 (18%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
+ +N +++ + K D ++ EM +P + ++ + I A R D
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 140 M-----------------------------------KRYNLVPNVFTYNCIIRKLCKNEK 164
M +++ PNV Y +I CK +
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGR 260
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE----------VNMALRLITRMTKEN 214
++ A + L E ERG +YN +L C RA + +A L M +
Sbjct: 261 IDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERG 320
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ PD ++++VL + R + + + + M+++G PSV TY+ +V LC G++E+A
Sbjct: 321 IEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLC-SCGRIEDA 379
Query: 275 CKYFEMMVDEGI 286
+ MV G+
Sbjct: 380 EELLGEMVRNGV 391
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 159/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G +P+ + ++H C+R ++ AHQ + P YS ++ G G+
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L ++M+ R C D+ ++L++A+CKA ID A +LR + PD +YSI
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C+A + LD M + P+V TYN ++ LCK+ ++ +A+ L D M G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C ++ A +++ RM + +PD TY+ ++ L + G D+A
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAF 600
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V++ M G P++ TY+ ++ GLCK K+E+A + E+M + P S T L N
Sbjct: 601 DVFQEMLGCGCAPNLVTYNTLIDGLCKIN-KVEQAAEMLEIMRKQSCTPDSITYTCLING 659
Query: 300 L 300
L
Sbjct: 660 L 660
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 174/317 (54%), Gaps = 10/317 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P ++ ++ +L K V A + D +P V TYS L+ GL G+L EA L
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M C +I+ +N++++ CK G IDEA+ +L EM G +P+ +Y++ + AFC+
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ M VPN+FTYN ++ CK ++VE A QLL MI++G P+ S
Sbjct: 1066 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++A C +V+ + L+ +M N +PD T+N ++ + + R D A E++ ++
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF--EMMVDEGIPP----YSSTVEML-RNR 299
+ G P++ TY+ +VHGLCK + + ++A +Y EM +G P Y++ ++ L +++
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSR-RFDQA-EYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243
Query: 300 LVGLGFLDIIEILADKM 316
V + +++L+D +
Sbjct: 1244 RVDRAYKLFLQMLSDGL 1260
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 161/309 (52%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ LLH LCK + A + +P + TY+ ++ G +G
Sbjct: 974 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L +EM++ C +++ + LL+A CK G ++A G++ M G P+ F+Y+
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ +++ ++L SM + VPNV +YN +I LCK KV E LL++M+
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N I+ C V++A L + + P+ TYN ++ L + RFD+A
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213
Query: 240 EVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M K+G P + TY+ ++ GLCK K +++ A K F M+ +G+ P T ++ +
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSK-RVDRAYKLFLQMLSDGLAPDDVTYSIVIS 1272
Query: 299 RLVGLGFLD 307
L F+D
Sbjct: 1273 SLCKWRFMD 1281
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 144/273 (52%), Gaps = 2/273 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G +P + L L+ ALCK + A + + + P V YSIL+ L
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKR 490
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA D M++ +C D++ +NS+++ +CK+ I++A + MR+ G PD +YSI
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+FC+ N++ S F++L+ MK VP+V TY+ +I LCK V++A+ + EM+ G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C +V A ++ M K++ PD TY ++ L R + A
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
V M+ +G P TY ++ L +K LE
Sbjct: 671 RVLREMKDKGCLPDRMTYGTLLRAL-QKTNNLE 702
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 153/283 (54%), Gaps = 3/283 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+++ L+H LC+ + A++ + +H V ++++++GL +L A +L
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 67 FDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM E CP D+ ++++++++ K+G +D+A ++ +M S G P+ +YS +H C
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A + +L M R PN+ TYN II CK +++EAY LL+EM++ G P+
Sbjct: 995 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +L C + A+ L+ M ++ +P+ TYN +L + + +RA ++ SM
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G P+V +Y+ ++ GLCK K+ E E M+ P
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKAT-KVHEGVLLLEQMLSNNCVP 1156
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G P+++ + +LH CK V+ A + P V +Y+ ++ GL + +
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ D+M++R C +++ + +L++ C+ G++D A ++R+M G P+A +Y+
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC ND+ +VL M + P+ Y+ II CK K+ EA+ LL++MI RG
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + ++ C A ++ A L+ + PD Y++++ L + R A
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M K YP V TY+ +V GLCK + ++ +A F+ M G+ P
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSR-RINDAFLLFDRMRAAGVMP 543
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 3/285 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + I+ + LL+ L K AH F + ++ TYS L+ G G++ A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDEM + H S+L +C AG +A REM S PD+ +Y+ I+
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMING 239
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+++ + R+L+ M PNVF+YN ++ CK +VE A LL++M+ RG PD
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY ++ C +V+ A R++ +M + P+ TY ++ RVG D A E+
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +RG+ P+ TY+ ++H C++ +E A + +MM+ G PP
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRN-DMERAHQVLQMMIQTGCPP 403
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 3/298 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G P+++ + LL CK+ V+ A Q + + P V +Y+ ++ GL +
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E L ++ML C DI+ N++++AMCK +D A+ + ++ G P+ +Y+
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+H C++ +L M R P++ TYN +I LCK+++V+ AY+L +M+
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD+ +Y+ +++ C ++ A ++ M K P TY ++ + G D+A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ + + +G YP V T+S+ + L K+G+L +A + E M+ G+ P + T L
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFIDWL-SKRGRLRQAGELLETMLRAGLVPDTVTYNTL 1375
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 148/285 (51%), Gaps = 3/285 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G Y + LL AL + K K A Q + N K +P + T++IL+ GL G++ A
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYRN-KLCCSPNMFTFTILIHGLCRAGDIGTAY 897
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIHA 123
+L EM P +++ HN +++ +C A +D A + +EM G+ PD F+YS + +
Sbjct: 898 ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDS 957
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
++ + R+++ M PNV TY+ ++ LCK K++EA LL M G +P+
Sbjct: 958 LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN I+ HC ++ A L+ M P+ TY ++L + G+ + A + E
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++G+ P++ TY+ ++ CKK ++E AC+ M+ +G P
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKD-EVERACQLLSSMIQKGCVP 1121
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I + ++ A+CK V +A++ F+ + TP + TY+ LV GL +A L
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Query: 67 FDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
EM ++ C DI+ +N++++ +CK+ +D A+ + +M S G PD +YSI I + C
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + VL+ M + P TY +I CK +++A ++L ++ +G+ PD
Sbjct: 1276 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 1335
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+++ + + R + A L+ M + ++PD TYN +LK + A +++E M
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G P +TY+ +V L KK + + + MVD G
Sbjct: 1396 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 1435
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 124/251 (49%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
+L LC A F P TY+ ++ GL L +A +L +EM++
Sbjct: 202 ILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 261
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
++ ++N++L CKA ++ A +L +M + G PD SY+ I+ C+ + + R
Sbjct: 262 APNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACR 321
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V+D M + PNV TY ++ C+ ++ A +L+ +M ERG P+ +YN I+ C
Sbjct: 322 VMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFC 381
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
R ++ A +++ M + PD Y+ ++ + G+ A ++ E M +RG P V+
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVA 441
Query: 256 TYSVMVHGLCK 266
S ++ LCK
Sbjct: 442 CLSTLIDALCK 452
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 23/321 (7%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P I + ++ LCK K V A++ F + P TYSI++ L + EA
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ML+ + + +L++ CK GN+D+A +L+ + S G+ PD ++SIFI
Sbjct: 1284 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 1343
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +L++M R LVP+ TYN +++ C E+A L + M + G PD
Sbjct: 1344 LSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPD 1403
Query: 184 EWSYNAILAYHCD------------RAEVNMALRLITRMTKE-----NVMPDRHTYNMVL 226
+Y ++ + D ++ V+ +L ++ + V D ++
Sbjct: 1404 NATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIV 1463
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + G A +V+E M++R +V +S M+ G+ + E+A + +M EG+
Sbjct: 1464 DMFGKCGSPQDARKVFEGMDQR----NVVLWSAML-GVYVFHKQEEQAFGLWRVMGLEGV 1518
Query: 287 PPYSSTVEMLRNRLVGLGFLD 307
P + T L G LD
Sbjct: 1519 EPDAVTFLSLLTMCCHAGLLD 1539
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ TY+ +I + K+ AY+L DEM +G + +IL CD + + A+
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M+K PD TYN ++ L + R D A + E M GF P+V +Y+ ++HG CK
Sbjct: 220 REMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++E A E MV G PP + + N L L +D + DKM
Sbjct: 279 N-RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 326
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 153/409 (37%), Gaps = 92/409 (22%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ + L+ LCK V+ A + + K TP TY+ L+ GL +
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ EM ++ C D + + +LL A+ K N++ +L+EM + E +
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT-EEGQWNANGA 724
Query: 120 FIHAFCEANDI------------HSVFRVLDSMKRYNL---------VPNVFTYNCIIRK 158
+H F D+ S RVLDS + V V T K
Sbjct: 725 RLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHK 784
Query: 159 LCKNEKVEEAYQLLDEMIERGA----------------NPD------EWSYNAILAYHCD 196
+ + A++ + +ER N D +W+ + Y+ D
Sbjct: 785 IVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQ-EGYNHD 843
Query: 197 RAEVNMALRLITRMTKEN-----------VMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
N L+ + R+ + P+ T+ +++ L R G A E+ + M
Sbjct: 844 TYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEM 903
Query: 246 EKRGFYPSVSTYSVMVHGLCK-----------------------------------KKGK 270
+ G +V ++V++ GLC K GK
Sbjct: 904 PRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGK 963
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+++AC+ E MV +G P T L + L G LD L +M RS
Sbjct: 964 VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 1012
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A E V+ +V G G +ARK+F+ M +R +++ +++L
Sbjct: 1448 ASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQE 1503
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNC 154
++A G+ R M G EPDA ++ + C A + + S+ R Y L P V ++C
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSC 1563
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
+I L + V EA L M+ P ++N +L+ + + ALR+
Sbjct: 1564 VIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 163/319 (51%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P++ + L+ CKR +V A + P V TYS L+ GL +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA+++ +EM D +++L+ +CKA I+EA MLR M G PD YS
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHAFC++ + + L M++ P+V TYN +I LCK K+ EA +LD+M E G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +Y+ ++ C + A +L+ RM K PD TY ++ L + GR + A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + M++ G P+V TY+ ++ GLCK + K++EA + E M + G PP T + N
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKAR-KVDEAERVMEEMRNAGCPPNLVTYNTMVN 416
Query: 299 RLVGLGFLDIIEILADKME 317
L G + + L +M+
Sbjct: 417 GLCVSGRIKEAQQLVQRMK 435
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 5/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G++P++ L+ LCK + A + + K TP TYS L+ GL +
Sbjct: 153 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADK 212
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ M C D++ ++S++ A CK+G + EA L+EMR PD +Y+
Sbjct: 213 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 272
Query: 120 FIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ I +LD M+ +++P+V TY+ +I LCK++ + EA +LLD M +
Sbjct: 273 VIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 332
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G NPD +Y I+ C + A L+ M + P+ TY ++ L + + D A
Sbjct: 333 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 392
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD--EGIPPYSSTVEML 296
V E M G P++ TY+ MV+GLC G+++EA + + M D P ++T +
Sbjct: 393 ERVMEEMRNAGCPPNLVTYNTMVNGLC-VSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 451
Query: 297 RNRLVGLGFLDIIEILADKM 316
N L+ + E L ++M
Sbjct: 452 VNALMSSDLVQEAEQLLEQM 471
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 2/276 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V TY+ L+ +L EA KL +EM ER CP +++ +N L++A+CK + A +
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+++M G P+ +++ + FC+ ++ ++L M + PNV TY+ +I LCK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++K EA ++L+EM G PD ++Y+A++ C ++ A +++ RM PD
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ ++ + G+ A + + M K+ P V TY+ ++ GLC K GK+ EA + M
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC-KLGKIAEAQVILDQM 293
Query: 282 VDEG-IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ G + P T + N L L + L D+M
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 126/242 (52%), Gaps = 8/242 (3%)
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+ G+L A +L +EM D H ++ AM AG++D G + +RS+G +P+
Sbjct: 2 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVV 58
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y+ I AF A + ++L+ M+ PN+ TYN ++ LCK V A ++ +M
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
IE G P+ ++N+++ C R V+ A +L+ M + + P+ TY+ ++ L + +F
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSS 291
A EV E M+ G P TYS ++HGLCK K+EEA + M G P YSS
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKAD-KIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 292 TV 293
+
Sbjct: 238 II 239
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 5/300 (1%)
Query: 21 CKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDI 79
C + A + + K F P T++ ++ + + G+L A D + C ++
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
+ + +L+ A +A ++EA +L EMR G P+ +Y++ + A C+ + + + V+
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M PNV T+N ++ CK V++A +LL M+ +G P+ +Y+A++ C +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
A ++ M V PD TY+ ++ L + + + A ++ M G P V YS
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
++H C K GKL EA K + M + P T + + L LG + +++ D+M+ S
Sbjct: 238 IIHAFC-KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 161/301 (53%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P + L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 173 LLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGN 232
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M+++ C +++A+N++++++CK + EA + EM + G PD F+Y+
Sbjct: 233 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNS 292
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M ++PNV ++ ++ LCK + A+ ++D MI+RG
Sbjct: 293 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 352
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y A++ HC R+E++ A+++ M + +P+ +YN+++ ++ R D+A
Sbjct: 353 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 412
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M +G TY+ ++HGLC G+L+ A F MV G P T +L +
Sbjct: 413 GLLEQMSLQGLIADTVTYNTLIHGLC-HVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 471
Query: 300 L 300
L
Sbjct: 472 L 472
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ PS D +LL ++ K KH P V T +IL+ +
Sbjct: 103 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 162
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + ++L+ C D N+L+ +C G I EA + + G +PD +Y
Sbjct: 163 LGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGT 222
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ + + R+L SM + N PNV YN II LCK+ +V EA+ L EMI +G
Sbjct: 223 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG 282
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C+ E L+ M +MP+ ++ V+ L + G A
Sbjct: 283 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 342
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V + M KRG P V TY+ ++ G C + +++EA K F+ MV +G P + +L N
Sbjct: 343 DVVDMMIKRGVEPDVVTYTALMDGHCLRS-EMDEAVKVFDTMVHKGCVPNVRSYNILIN 400
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ +P++ + ++ +LCK + V A F +P + TY+ L+ L ++ E
Sbjct: 243 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 302
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +EM+ K +++ +++++A+CK G I AH ++ M G EPD +Y+
Sbjct: 303 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 362
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C +++ +V D+M VPNV +YN +I C+ +++++A LL++M +G
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + A+ L M +PD TY ++L L + A
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ +++E + Y++ + G+C + G+LE A F + +G
Sbjct: 483 VLLKAIEGSNLDADILVYNIAIDGMC-RAGELEAARDLFSNLSCQG 527
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + L++ LCK + A + + + P V Y+ ++ L +++EA
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF EM+ + DI +NSL+ A+C +L EM + P+ +S + A
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ I V+D M + + P+V TY ++ C +++EA ++ D M+ +G P+
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ +C ++ A+ L+ +M+ + ++ D TYN ++ L VGR A ++
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKK 267
M G P + TY +++ LCK
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKN 475
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 5/253 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M+ GI P I+ + L+HALC + KHV N+K P V +S +V L
Sbjct: 278 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK--IMPNVVVFSTVVDALCKE 335
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G ++ A + D M++R D++ + +L++ C +DEA + M G P+ SY
Sbjct: 336 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I+ +C+ + +L+ M L+ + TYN +I LC +++ A L EM+
Sbjct: 396 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 455
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y +L Y C + A+ L+ + N+ D YN+ + + R G +
Sbjct: 456 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 515
Query: 238 ATEVWESMEKRGF 250
A +++ ++ +GF
Sbjct: 516 ARDLFSNLSCQGF 528
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P + LL ++ K + + +M S G PD ++ +I
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC + F VL + + P+ T+N +IR LC K+ EA L D+ I G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ C + A+RL+ M ++N P+ YN ++ L + + A
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +G P + TY+ ++H LC + + MV+ I P + +
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALC-NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331
Query: 300 LVGLGFLDIIEILADKM 316
L G + I + D M
Sbjct: 332 LCKEGMIAIAHDVVDMM 348
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 4/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P + LL ALCK VK A F++ + FTPT+K ++ L+ G G+L
Sbjct: 217 MPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKL 276
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + ++ E DI+ +N+LL AG + +A+ +L+EMR EP+ S++
Sbjct: 277 MEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTL 336
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C + RV M+ + TY +I CK K+ + Y+LLD MI++G
Sbjct: 337 IQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGH 396
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +Y I+A H + E+ + L+ M K PD + YN+V++L ++G
Sbjct: 397 IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVR 456
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTVEMLR 297
VW ME G P + T+ +M+HG ++ L EAC++F+ MV G+ P Y + E+L
Sbjct: 457 VWNEMEATGLSPGLDTFVIMIHGFLSQRC-LVEACEFFKEMVGRGLLSAPQYGTLKELLN 515
Query: 298 NRL 300
+ L
Sbjct: 516 SLL 518
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+ ++++ + K ++ EMR + + + + + F A + VLD M
Sbjct: 158 YKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEM 217
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+Y P+ + C++ LCKN V+EA L ++M R P + ++L C ++
Sbjct: 218 PKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKL 276
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A ++ ++ + PD YN +L G+ A ++ + M ++ P+V +++ +
Sbjct: 277 MEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTL 336
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ LC KK K+EEA + F M G P + T L
Sbjct: 337 IQALCAKK-KMEEAMRVFFEMQSCGCPADAVTYTTL 371
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P++ + L+ CKR +V A + P V TYS L+ GL +
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA+++ +EM R D +++L+ +CKA I+EA MLR M G PD YS
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHAFC++ + + L M++ P+V TYN +I LCK K+ EA +L++M E G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +Y+ ++ C + A +L+ RM K PD TY ++ L + GR + A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + M++ G P+V TY+ ++ GLCK + K++EA + E M + G PP T + N
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKAR-KVDEAERVMEEMRNAGCPPNLVTYNTMVN 538
Query: 299 RLVGLGFLDIIEILADKME 317
L G + + L +M+
Sbjct: 539 GLCVSGRIKEAQQLVQRMK 557
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 5/325 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G++P++ L+ LCK + A + + K TP TYS L+ GL +
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ M C D++ ++S++ A CK+G + EA L+EMR PD +Y+
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394
Query: 120 FIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ I +L+ M+ +++P+V TY+ +I LCK++ + EA +LLD M +
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G NPD +Y I+ C + A L+ M + P+ TY ++ L + + D A
Sbjct: 455 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 514
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD--EGIPPYSSTVEML 296
V E M G P++ TY+ MV+GLC G+++EA + + M D P ++T +
Sbjct: 515 ERVMEEMRNAGCPPNLVTYNTMVNGLC-VSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 573
Query: 297 RNRLVGLGFLDIIEILADKMERSTS 321
N L+ + E L ++M+ +TS
Sbjct: 574 VNALMSSDLVQEAEQLLEQMKSTTS 598
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 9/294 (3%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + + LL L + +KH + F P V +Y+I++ G + G+L A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM D H ++ AM AG++D G + +RS+G +P+ +Y+ I A
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALIAA 188
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F A + ++L+ M+ PN+ TYN ++ LCK V A ++ +MIE G P+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ C R V+ A +L+ M + + P+ TY+ ++ L + +F A EV E
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
M+ RG P TYS ++HGLCK K+EEA + M G P YSS +
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKAD-KIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 145/276 (52%), Gaps = 2/276 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V TY+ L+ +L EA KL +EM ER CP +++ +N L++A+CK + A +
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+++M G P+ +++ + FC+ ++ ++L M + PNV TY+ +I LCK
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++K EA ++L+EM RG PD ++Y+A++ C ++ A +++ RM PD
Sbjct: 297 SQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 356
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ ++ + G+ A + + M K+ P V TY+ ++ GLC K GK+ EA E M
Sbjct: 357 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC-KLGKIAEAQVILEQM 415
Query: 282 VDEG-IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ G + P T + N L L + L D+M
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 150/314 (47%), Gaps = 5/314 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P + + ++ C + A + + K F P T++ ++ + + G+L A
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA-- 166
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
D + C +++ + +L+ A +A ++EA +L EMR G P+ +Y++ + A C
Sbjct: 167 -MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + + + V+ M PNV T+N ++ CK V++A +LL M+ +G P+
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+A++ C + A ++ M V PD TY+ ++ L + + + A ++ M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
G P V YS ++H C K GKL EA K + M + P T + + L LG
Sbjct: 346 AGSGCTPDVVVYSSIIHAFC-KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404
Query: 306 LDIIEILADKMERS 319
+ +++ ++M+ S
Sbjct: 405 IAEAQVILEQMQES 418
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 4/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P + LL ALCK VK A F++ + FTPT+K ++ L+ G G+L
Sbjct: 184 MPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKL 243
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + ++ E DI+ +N+LL AG + +A+ +L+EMR EP+ S++
Sbjct: 244 MEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTL 303
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C + RV M+ + TY +I CK K+ + Y+LLD MI++G
Sbjct: 304 IQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGH 363
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +Y I+A H + E+ + L+ M K PD + YN+V++L ++G
Sbjct: 364 IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVR 423
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTVEMLR 297
VW ME G P + T+ +M+HG ++ L EAC++F+ MV G+ P Y + E+L
Sbjct: 424 VWNEMEATGLSPGLDTFVIMIHGFLSQRC-LVEACEFFKEMVGRGLLSAPQYGTLKELLN 482
Query: 298 NRL 300
+ L
Sbjct: 483 SLL 485
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+ ++++ + K ++ EMR + + + + + F A + VLD M
Sbjct: 125 YKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEM 184
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+Y P+ + C++ LCKN V+EA L ++M R P + ++L C ++
Sbjct: 185 PKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKL 243
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A ++ ++ + PD YN +L G+ A ++ + M ++ P+V +++ +
Sbjct: 244 MEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTL 303
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ LC KK K+EEA + F M G P + T L
Sbjct: 304 IQALCAKK-KMEEAMRVFFEMQSCGCPADAVTYTTL 338
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 180/347 (51%), Gaps = 3/347 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P Y LL ALCK VK A F++ ++ + P+VK ++ L+ G G+L
Sbjct: 218 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKL 277
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M + DI+ +N+LL +AG + +A+ +L+EMR EP+A SY++
Sbjct: 278 MEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVL 337
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I + C+ + R+ M+ +V TY+ +I CK K++ Y+LLDEMI++G
Sbjct: 338 IQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGH 397
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ Y I+ H + E+ L+ M K PD YN V++L ++G +
Sbjct: 398 FPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQ 457
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLRN 298
+W ME G P + T+ +M++G ++G L EAC+YF+ MV G+ P T++ L N
Sbjct: 458 LWNEMESSGLSPGMDTFVIMINGFL-EQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMN 516
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
L+ L++ + + + S C + A + F K +E
Sbjct: 517 SLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEA 563
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 7/212 (3%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---HAFCEANDIHSV 133
+D A+ ++++ + + ++ EMR P + +F+ F A +H
Sbjct: 154 LDHDAYKAMIKVLSRMRQFGAVWALIEEMRQ--ENPHLITPQVFVILMRRFASARMVHKA 211
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
VLD M +Y P+ + + C++ LCKN V+EA L ++M R P + ++L
Sbjct: 212 VEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYR-WKPSVKHFTSLLYG 270
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A ++ +M + PD YN +L + G+ A ++ + M ++ P+
Sbjct: 271 WCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPN 330
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++Y+V++ LCK + +LEEA + F M G
Sbjct: 331 ATSYTVLIQSLCKHE-RLEEATRLFVEMQTNG 361
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G P + + ++ CK VK Q ++ + +P + T+ I++ G + G
Sbjct: 427 MQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGC 486
Query: 60 LSEARKLFDEMLERK--CPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFS 116
L EA + F EM+ R L+ ++ +A ++ A + S G + + +
Sbjct: 487 LVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSA 546
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++I+IHA + M +L+PN T+ ++ L K
Sbjct: 547 WTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKK 591
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 163/308 (52%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G++P++ + LL LC + + A + FD K P V TYS ++ GL +G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M E+ C +++A+N++++++CK + EA EM G PD F+YS
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC ++ + M N++PN T+ +I LCK + EA+ + + M E+G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YNA++ +C R++++ A +L M ++ P+ +YN+++ + GR D A
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + P + TYS ++ G C + G+ +EA + + M G+ P T ++ +
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFC-QVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 300 LCKHGHLD 307
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE + P+ L+ LCK++ + A F+ + P V TY+ LV G +
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQ 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+KLF+ M + C ++ ++N L+ CK+G IDEA G+L EM PD F+YS
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ +L M Y L+PN+ TY+ ++ LCK+ ++EA++LL M E
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y ++ C ++ A L + + + + P TY +++ L++ G + A
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E++ M G P+ TY+V++ G + G A + E MV +G SST ML +
Sbjct: 381 ELFREMAVNGCLPNSCTYNVIIQGFL-RNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 159/306 (51%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G KP++ + ++ +LCK + V A FF K P V TYS ++ G ++G
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA LF +M+ER + + L++ +CK I EA + M G EPD ++Y+
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C + + ++ + M R PNV +YN +I CK+ +++EA LL EM +
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+ ++ C A L+ M ++P+ TY++VL L + G D A
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAF 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ ++M++ P++ Y++++ G+C GKLE A + F + +GI P T ++ +
Sbjct: 311 ELLKAMQESKIEPNIFIYTILIEGMC-TFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369
Query: 300 LVGLGF 305
L+ G
Sbjct: 370 LLKGGL 375
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L++ CK + A H+ TP + TYS L+RG VG EA
Sbjct: 215 GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L EM +++ ++ +L+ +CK G++DEA +L+ M+ EP+ F Y+I I
Sbjct: 275 QELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + + ++ + P V TY +I L K EA +L EM G P+
Sbjct: 335 MCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPN 394
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+YN I+ + A+RLI M + D T+ M+ L
Sbjct: 395 SCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL 439
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV I P + L+ C +K A F+ P V T+SIL+ G G+
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ + M+++ +D++ +NSL++ C +++A + M G PD +SYSI
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + ++ + M + PNV TYN ++ LCK+ + A +L+DEM +RG
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN+IL C V+ A+ L+T++ ++ + PD TY +++ L +VGR D A
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V+E + +G+ P++ TY+ +++G C KG +E M D G P + T E+L +
Sbjct: 464 KVFEDLLVKGYSPNIYTYTSLINGFC-NKGFFDEGLAMLSKMKDNGCIPNAITYEILIHS 522
Query: 300 L 300
L
Sbjct: 523 L 523
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 166/342 (48%), Gaps = 3/342 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P++ ++ ++CK K V A + + +P V TYS L+ G VG+L A
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAV 253
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF+ M+ ++ + L++ CK G + EA +L M + D +Y+ + +
Sbjct: 254 DLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGY 313
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ + + M + + P+V++Y+ +I CK + V+EA +L +EM + P+
Sbjct: 314 CLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNV 373
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+++ C + AL L+ M + TYN +L + + D+A +
Sbjct: 374 VTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTK 433
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++++G P + TY+V+++GLCK G+L++A K FE ++ +G P T L N G
Sbjct: 434 IKEKGIQPDIFTYTVLINGLCKV-GRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKG 492
Query: 305 FLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
F D + KM + C + + + F K +++ E
Sbjct: 493 FFDEGLAMLSKM-KDNGCIPNAITYEILIHSLFEKDENDKAE 533
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 165/332 (49%), Gaps = 6/332 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + L++ + H+K + F K + P T++IL++GL GE+ +A
Sbjct: 88 GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + +D +++ +L+ +C+ G A +LR + P+ YS I +
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ F + M + P+V TY+ +I C K++ A L + MI NP+
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++++ ++ C +V A ++ M K+NV D TYN ++ V + ++A ++
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG P V +YS+M++G CK K ++EA K FE M + I P T L + L
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIK-MVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386
Query: 304 G----FLDIIEILADKMERSTSCTIQELANAM 331
G L++++ + D+ + S T + +A+
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAI 418
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 134/251 (53%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +K + + L+ C K V A F+ A+ TP V +YSI++ G +
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF+EM ++ +++ +NSL++ +CK+G A ++ EM G + +Y+
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ N + +L +K + P++FTY +I LCK ++++A ++ ++++ +G
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ ++Y +++ C++ + L ++++M +P+ TY +++ L D+A
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAE 533
Query: 240 EVWESMEKRGF 250
++ M RG
Sbjct: 534 KLLREMIARGL 544
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G+ P ++ +++ CK K V A + F+ + P V TY+ LV GL G
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L DEM +R P +I+ +NS+L+A+CK ++D+A +L +++ G +PD F+Y++
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + +V + + PN++TY +I C +E +L +M + G
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+ +Y ++ ++ E + A +L+ M ++
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 66 LFDEMLERKCPVD-ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF+ +L + P+ + +L ++ KA A + ++M G +PD + ++ ++ F
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ I F V + + P+ T+ +I+ LC +V +A D+++ +G D+
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SY ++ C E A++L+ R+ + V P+ Y+ ++ + + + A +++
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M + P V TYS ++ G C GKL+ A F M+ + I P T +L
Sbjct: 224 MVSKRISPDVVTYSSLISGFC-VVGKLKYAVDLFNRMISDNINPNVYTFSIL 274
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 172/326 (52%), Gaps = 3/326 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +G +P Y LL AL K VK A F+ ++ + P+VK ++ L+ G G+L
Sbjct: 192 MPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWCKEGKL 251
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M + DI+ +N+LL +A + +A+ +L+EMR G EP+A SY++
Sbjct: 252 MEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVL 311
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I + C+ + RV M+R ++ TY+ +I CK K++ Y+LLDEMI++G
Sbjct: 312 IQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGH 371
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ Y I+ H + E+ L+ M K PD YN V++L ++G
Sbjct: 372 FPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVR 431
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLRN 298
+W ME G PS+ T+ +M++G ++G L EAC+YF+ MV G+ P T++ L N
Sbjct: 432 LWNEMESSGLSPSIDTFVIMINGFL-EQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMN 490
Query: 299 RLVGLGFLDIIEILADKMERSTSCTI 324
L+ L++ + + + S C +
Sbjct: 491 SLLRAEKLEMAKDAWNCITASKGCQL 516
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---HAFCEANDIHSV 133
+D A+ ++++ + + ++ EMR P + +F+ F A +H
Sbjct: 128 LDHDAYKAMIKVLSRMRQFGAVWALIEEMRQ--ENPHLITPQVFVILMRRFASARMVHKA 185
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+VLD M Y P+ + + C++ L KN V+EA L +E+ R P + ++L
Sbjct: 186 VQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRW-KPSVKHFTSLLYG 244
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A ++ +M + PD YN +L + + A ++ + M ++G P+
Sbjct: 245 WCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPN 304
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++Y+V++ LCK + +LEEA + F M G
Sbjct: 305 ATSYTVLIQSLCKHE-RLEEATRVFVEMQRNG 335
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G P + + ++ CK VK + ++ + +P++ T+ I++ G + G
Sbjct: 401 MQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGC 460
Query: 60 LSEARKLFDEMLERK--CPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFS 116
L EA + F EM+ R L+ ++ +A ++ A + S G + + +
Sbjct: 461 LVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSA 520
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
++I+IHA + +M +L+P T+ ++R L K E A ++ +++
Sbjct: 521 WTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGLKKLYNREFAAEITEKVR 580
Query: 177 ERGAN 181
+ A+
Sbjct: 581 KMAAD 585
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 158/302 (52%), Gaps = 5/302 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ + LLH LC+ + V A D TP V TY L+ GL VG
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + +M+++ D++ +N L+ +CKA +DE+ +LR S G +PD +YS
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C +N + R+L +K P+V Y+ +I LCK KV+EA+ L + M G
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +Y+ ++ C V+ A L+ RM + P TYN ++K L + D A
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E+ E ME+ PS TY++++HG+C+ + A YF+ M+D G+ P YS +E
Sbjct: 414 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEG 473
Query: 296 LR 297
L+
Sbjct: 474 LK 475
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L+ LC+ ++ A +FF +P V TYS+L+ GL +S+A +L + M R C
Sbjct: 85 LVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGC 144
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D++ + L++ +CK + A +LREM G P+ +Y+ +H C A +
Sbjct: 145 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 204
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
++ M PNV TY +I LCK +V++A +L +MI++G PD YN ++ C
Sbjct: 205 LMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 264
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+V+ ++ L+ R + PD TY+ V+ L R R D A + ++ RG P V
Sbjct: 265 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 324
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
YS ++ GLC K GK++EA +E+M +G T L + L G +D +L +
Sbjct: 325 LYSTLIDGLC-KAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 383
Query: 316 MER 318
M R
Sbjct: 384 MVR 386
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 163/307 (53%), Gaps = 10/307 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G +P++ + L+ LCK A + F++ K E +P++ TY+ L+ GL G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF EML+R+ D+++ N L+ +C+AG I+ A R+M P+ +YS+
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+AN + +L+SMK P+V TY ++ LCK KV A+++L EM++ G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN++L C V+ AL L+ MT P+ TY ++ L +VGR A
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+ M +G P + Y+++++GLCK +++E+ V GI P YSS +
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKAD-QVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 296 L--RNRL 300
L NRL
Sbjct: 298 LCRSNRL 304
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M G + L+ LCK V AH TP + TY+ L++GL D+
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH-GMLREMRSIGAEPDAFSYS 118
L EA +L +EM C + +N L+ MC+ +D A +EM G PD +YS
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468
Query: 119 IFIHAFCEANDIHSV-FRVLDSM 140
I + ++ D+H + VLD M
Sbjct: 469 ILLEGLKKSKDLHELRHLVLDQM 491
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G++P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 128 ILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 187
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M + C D++ + S+++++CK + EA + +M G PD F+Y+
Sbjct: 188 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 247
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+ C + V +L+ M ++P+V ++ ++ LCK K+ EA+ ++D MI RG
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 307
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC ++E++ A+++ M P+ +YN ++ ++ R D+AT
Sbjct: 308 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 367
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TY+ ++HGLC G+L++A F MV G P +T +L +
Sbjct: 368 YLFEEMCQKELIPNTVTYNTLMHGLC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 426
Query: 300 LVGLGFLDIIEILADKMERS 319
L LD L +E S
Sbjct: 427 LCKKSHLDEAMALLKTIEGS 446
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 156/304 (51%), Gaps = 6/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR---KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
MV GI P I+ L+H+LC KHV N+K P V +S +V L
Sbjct: 233 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK--IMPDVVIFSTVVDALCKE 290
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+++EA + D M+ R +++ +N+L++ C +DEA + M G P+ SY
Sbjct: 291 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 350
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + + + M + L+PN TYN ++ LC ++++A L EM+
Sbjct: 351 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVA 410
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y +L Y C ++ ++ A+ L+ + N+ PD Y +V+ + R G +
Sbjct: 411 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 470
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A +++ ++ +G P+V TY++M++GLC ++G L+EA K F M G P T +
Sbjct: 471 ARDIFSNLSSKGLRPNVRTYTIMINGLC-RRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 529
Query: 298 NRLV 301
L+
Sbjct: 530 QGLL 533
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M+ PS D ++LL ++ K K N F P V T +IL+ +
Sbjct: 58 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL-SNQMDSFGIPPDVYTLNILINSFCHLN 116
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A + ++L+ D +L+ +C G I +A + +M G +P+ +Y
Sbjct: 117 RPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYG 176
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + ++ R+L SM++ N P+V Y II LCK+ +V EA+ L +M+ +
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 236
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD ++Y +++ C+ E L+ +M +MPD ++ V+ L + G+ A
Sbjct: 237 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 296
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+V + M RG P+V TY+ ++ G C + +++EA K F+ MV G P
Sbjct: 297 HDVVDMMIIRGVEPNVVTYNALMDGHCLQS-EMDEAVKVFDTMVHNGYAP 345
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 140/277 (50%), Gaps = 3/277 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + L+ C + + A + FD H + P V +Y+ L+ G +
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 362
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM +++ + + +N+L+ +C G + +A + EM + G PD +Y I
Sbjct: 363 MDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRI 422
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +L +++ N+ P++ Y +I +C+ ++E A + + +G
Sbjct: 423 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 482
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C R ++ A +L M PD TYN + + L++ RA
Sbjct: 483 LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAI 542
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
++ + M RGF VST +++V LC KL+++ K
Sbjct: 543 QLLQEMLARGFSADVSTTTLLVEMLCDD--KLDQSVK 577
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P + N LL ++ K + +M S G PD ++ +I
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N F VL + + L P+ T+ +IR LC K+ +A L D+MI G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C N A+RL+ M + N PD Y ++ L + + A
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G P + TY+ ++H LC
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K+GK+ EA +MM+ G+ P T L
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 318
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+HN +D+A M + P ++ + + + +VF + +
Sbjct: 33 LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + + P+V+T N +I C + A+ +L ++++ G PD ++ ++ C +
Sbjct: 93 MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ AL L +M E P+ TY ++ L +VG + A + SME+ P V Y+
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
++ LCK + ++ EA F MV +GI P Y+S + L N
Sbjct: 213 IIDSLCKDR-QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 254
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + LL LCK+ H+ A + P ++ Y+I++ G+ GE
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR +F + + ++ + ++ +C+ G +DEA+ + EM G PD +Y+
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + ++L M +V T ++ LC ++ + Q+L E ++
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ +N ++ + K ++ + L ++M G PD ++ N ++ C A +
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ ++ K + PD T+ +++ L G+ A +++ M GF P+V TY +++GLC
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC- 183
Query: 267 KKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLVGLGF 305
K G A + M P Y+S ++ L ++R V F
Sbjct: 184 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M FG+K + D + L+ L K K VK AH F K F P +KTY++L+ G G
Sbjct: 221 MSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEK 280
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L + ++ EML+ D++A+ +L+ + CK+G DEA + REM + G P Y
Sbjct: 281 DLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYC 340
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ + + + K V T N ++ C++ K + A++++DEM +
Sbjct: 341 MLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKT 400
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +Y+ IL Y ++ A + RM E P +TY M++ + R D A
Sbjct: 401 GIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMA 460
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW+ M+++G P + +S +++GLC + +LEEAC YF+ M+D+GI P L+
Sbjct: 461 LKVWKQMKEKGVLPCMHMFSSLINGLCFEN-RLEEACVYFQEMLDKGIRPPGQLFSNLKE 519
Query: 299 RLVGLGFLDIIEILADKME 317
L+ G + + + +A K++
Sbjct: 520 ALIEGGRISLAQDMALKLD 538
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 160/304 (52%), Gaps = 4/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G++P Y LL ALCK VK A + F++ + +F P ++ ++ L+ G G+L
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKL 252
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+++ +M E DI+ +LL AG + +A+ ++ +MR G EP+ Y++
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 121 IHAFCEAND-IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + RV M+RY ++ TY +I CK +++ Y +LD+M ++G
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + +Y I+ H + + L LI +M + PD YN+V++L ++G A
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLR 297
+W ME G P V T+ +M++G +G L EAC +F+ MV GI P T++ L
Sbjct: 433 RLWNEMEANGLSPGVDTFVIMINGF-TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Query: 298 NRLV 301
N LV
Sbjct: 492 NNLV 495
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 6/238 (2%)
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
S++ + K G++ EMR E P+ F + + F AN + VLD M
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEM 193
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+Y L P+ + + C++ LCKN V+EA ++ ++M E+ P+ + ++L C ++
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PNLRYFTSLLYGWCREGKL 252
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A ++ +M + + PD + +L G+ A ++ M KRGF P+V+ Y+V+
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ LC+ + +++EA + F M G T L + G +D + D M +
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 126/346 (36%), Gaps = 82/346 (23%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P I LL + A+ D K F P V Y++L++ L +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 -LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-------- 110
+ EA ++F EM C DI+ + +L+ CK G ID+ + +L +MR G
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 111 ---------------------------EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
PD Y++ I C+ ++ R+ + M+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--ANP------------------- 182
L P V T+ +I + EA EM+ RG + P
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 183 ---DEWSYNAILAYHCD---------------RAEVNMALRLITRMTKENVMPDRHTYNM 224
D WS + C+ + V A M + ++MP +TY
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
++K L ++ A E+ E + K +++ M + KKKG+
Sbjct: 562 LMKGLNKLYNRTIAAEITEKVVK------MASEREMSFKMYKKKGE 601
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 161/298 (54%), Gaps = 3/298 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P+I + L+ LC + FD E F P V TY L+ GL VG
Sbjct: 120 ILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 179
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C D++ + S+++++CK + +A + EM G P F+Y+
Sbjct: 180 TSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNS 239
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M ++PNV ++ ++ LCK KV EA+ ++D MI+RG
Sbjct: 240 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG 299
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC R+E++ A+++ M + PD +Y+ ++ ++ R ++A
Sbjct: 300 VEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAM 359
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEML 296
++E M ++ P+ TYS ++HGLC G+L++A F MV G IP + S +L
Sbjct: 360 YLFEEMCRKELIPNTVTYSTLMHGLC-HVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 173/337 (51%), Gaps = 13/337 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M+ GI PSI+ + L+HALC + KHV N+K P V +S +V L
Sbjct: 225 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK--IMPNVVIFSTVVDALCKE 282
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ EA + D M++R +++ +N+L++ C +DEA + M G PD SY
Sbjct: 283 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S I+ +C+ I + + M R L+PN TY+ ++ LC ++++A L EM+
Sbjct: 343 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 402
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD SY +L Y C ++ A+ L+ + N+ PD Y +V+ + R G +
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM-- 295
A +++ ++ +G +P+V TY++M++GLC ++G L EA K F M +G P T +
Sbjct: 463 ARDLFSNLSSKGLHPNVWTYTIMINGLC-QQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 521
Query: 296 ---LRNRLVGLGFLDIIEILADKM--ERSTSCTIQEL 327
LRN G + E+LA + STS + E+
Sbjct: 522 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 147/292 (50%), Gaps = 8/292 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+ PSI D +LL ++ K KH + ++HQ P + T +IL+
Sbjct: 50 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM---DSFGIPPNIYTLNILINSFCH 106
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ L A + ++L+ +I N+L+ +C G I E + +M G +P+ +
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 166
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I+ C+ + R+L SM++ N P+V Y II LCK+ +V +A+ L EMI
Sbjct: 167 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P ++YN+++ C+ E L+ M +MP+ ++ V+ L + G+
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A +V + M KRG P+V TY+ ++ G C + +++EA K F+ MV +G P
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS-EMDEAVKVFDTMVCKGFAP 337
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 134/265 (50%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G++P++ + L+ C R + A + FD + F P V +YS L+ G +
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM ++ + + +++L+ +C G + +A + EM + G PD SY I
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + +L +++ N+ P++ Y +I +C+ ++E A L + +G
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ W+Y ++ C + + A +L M ++ P+ TYN++ + +R R
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 534
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ + M RGF VST +V+V L
Sbjct: 535 QLLQEMLARGFSADVSTSTVLVEML 559
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 34/271 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P I LL ++ K + + +M S G P+ ++ +I
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC + F VL + + PN+ T+N +IR LC K+ E L D+MI G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N PD Y ++ L + + +A
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G PS+ TY+ ++H LC
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K+GK+ EA +MM+ G+ P T L
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 310
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+HN+ +D+A M + P ++ + + + +V + M
Sbjct: 26 SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + PN++T N +I C +++ A+ +L ++++ G P+ ++N ++ C ++
Sbjct: 86 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
L L +M E P+ TY ++ L +VG A + SME+ P V Y+ +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+ LCK + ++ +A F M+ +GI P Y+S + L N
Sbjct: 206 IDSLCKDR-QVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P LL LCK + + A + P ++ Y+I++ G+ GE
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR LF + + ++ + ++ +C+ G + EA + EM+ G P+ +Y++
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
F N+ ++L M +V T ++ L + + Q+L E ++
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 159/293 (54%), Gaps = 3/293 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P+I + L+ LC + FD E F P V TY L+ GL VG
Sbjct: 129 ILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 188
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C D++ + S+++++CK + +A + EM G P F+Y+
Sbjct: 189 TSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNS 248
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M ++PNV ++ ++ LCK KV EA+ ++D MI+RG
Sbjct: 249 LIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG 308
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC R+E++ A+++ M + PD +Y+ ++ ++ R ++A
Sbjct: 309 VEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAM 368
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSS 291
++E M ++ P+ TYS ++HGLC G+L++A F MV G IP + S
Sbjct: 369 YLFEEMCRKELIPNTVTYSTLMHGLC-HVGRLQDAIALFHEMVTRGQIPDFVS 420
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 173/337 (51%), Gaps = 13/337 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M+ GI PSI+ + L+HALC + KHV N+K P V +S +V L
Sbjct: 234 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK--IMPNVVIFSTVVDALCKE 291
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ EA + D M++R +++ +N+L++ C +DEA + M G PD SY
Sbjct: 292 GKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S I+ +C+ I + + M R L+PN TY+ ++ LC ++++A L EM+
Sbjct: 352 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 411
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD SY +L Y C ++ A+ L+ + N+ PD Y +V+ + R G +
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM-- 295
A +++ ++ +G +P+V TY++M++GLC ++G L EA K F M +G P T +
Sbjct: 472 ARDLFSNLSSKGLHPNVWTYTIMINGLC-QQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 530
Query: 296 ---LRNRLVGLGFLDIIEILADKM--ERSTSCTIQEL 327
LRN G + E+LA + STS + E+
Sbjct: 531 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 147/292 (50%), Gaps = 8/292 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+ PSI D +LL ++ K KH + ++HQ P + T +IL+
Sbjct: 59 MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM---DSFGIPPNIYTLNILINSFCH 115
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ L A + ++L+ +I N+L+ +C G I E + +M G +P+ +
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVT 175
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I+ C+ + R+L SM++ N P+V Y II LCK+ +V +A+ L EMI
Sbjct: 176 YGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P ++YN+++ C+ E L+ M +MP+ ++ V+ L + G+
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A +V + M KRG P+V TY+ ++ G C + +++EA K F+ MV +G P
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS-EMDEAVKVFDTMVCKGFAP 346
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 134/265 (50%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G++P++ + L+ C R + A + FD + F P V +YS L+ G +
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM ++ + + +++L+ +C G + +A + EM + G PD SY I
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + +L +++ N+ P++ Y +I +C+ ++E A L + +G
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ W+Y ++ C + + A +L M ++ P+ TYN++ + +R R
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ + M RGF VST +V+V L
Sbjct: 544 QLLQEMLARGFSADVSTSTVLVEML 568
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 34/271 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P I LL ++ K + + +M S G P+ ++ +I
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC + F VL + + PN+ T+N +IR LC K+ E L D+MI G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N PD Y ++ L + + +A
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G PS+ TY+ ++H LC
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K+GK+ EA +MM+ G+ P T L
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 319
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+HN+ +D+A M + P ++ + + + +V + M
Sbjct: 35 SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + PN++T N +I C +++ A+ +L ++++ G P+ ++N ++ C ++
Sbjct: 95 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
L L +M E P+ TY ++ L +VG A + SME+ P V Y+ +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+ LCK + ++ +A F M+ +GI P Y+S + L N
Sbjct: 215 IDSLCKDR-QVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 255
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P LL LCK + + A + P ++ Y+I++ G+ GE
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR LF + + ++ + ++ +C+ G + EA + EM+ G P+ +Y++
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
F N+ ++L M +V T ++ L + + Q+L E ++
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y + ++ LCK V A Q K++ P Y+ L+ G G G +S
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEM +K D + + S++ +C+AG + EA + EM S G +PD +Y+ I
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A ++ F + + M L PNV TY ++ LCK +V+ A +LL EM E+G P+
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ C + A++L+ M PD TY ++ ++G +A E+
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G P++ T++V+++G C G LE+ + + M+D+GI P ++T L
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFC-MSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 173/336 (51%), Gaps = 10/336 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGE 59
E G+ + + +LH LC+ VK AH + EF P V +YS++V G V +
Sbjct: 245 EVGVCWNTVSYNIILHLLCQLGKVKEAHSLL--IQMEFRGNVPDVVSYSVIVDGYCQVEQ 302
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + KL +E+ + + +NS++ +CK G + EA +LR M++ PD Y+
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F ++ ++ +++ D MKR +VP+ TY +I LC+ KV EA +L EM+ +G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +Y A++ +C E+ A L +M ++ + P+ TY ++ L + G D A
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M ++G P+V TY+ +++GLC K G +E+A K E M G P + T + +
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLC-KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Query: 300 LVGLGFL----DIIEILADKMERSTSCTIQELANAM 331
+G + +++ I+ DK + T T L N
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 149/287 (51%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP L+ CK +K A + + TP V TY+ LV GL GE
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L EM E+ ++ +N+L+ +CK GNI++A ++ EM G PD +Y+
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+C+ ++ +L M L P + T+N ++ C + +E+ +L+ M+++G
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+++ +C R + + + M + V+PD +TYN+++K + A
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + M ++GF + ++Y+ ++ G K+K K EEA K FE M G
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRK-KFEEARKLFEEMRTHGF 703
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I P ++H LC+ V A + F + P TY+ L+ G GE+ EA
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAF 447
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L ++M+E+ +++ + +L++ +CK G +D A+ +L EM G +P+ +Y+ I+
Sbjct: 448 SLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ +I ++++ M P+ TY I+ CK ++ +A++LL M+++G P
Sbjct: 508 CKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTI 567
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ C + RLI M + +MP+ T+N ++K E+++
Sbjct: 568 VTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKG 627
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M +G P +TY++++ G CK + ++EA + MV++G
Sbjct: 628 MHAQGVVPDTNTYNILIKGHCKAR-NMKEAWFLHKEMVEKGF 668
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 164/335 (48%), Gaps = 9/335 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE-L 60
++G P ++D+ L + + A + FD + +V + ++ + L + + +
Sbjct: 176 DWGAHPLVFDV--FFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI 233
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++F E E + +++N +L +C+ G + EAH +L +M G PD SYS+
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +C+ + V ++++ ++R L PN +TYN II LCK +V EA Q+L M +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD Y +++ V++ +L M ++ ++PD TY ++ L + G+ A +
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M +G P TY+ ++ G C K G+++EA MV++G+ P T L + L
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYC-KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Query: 301 VGLGFLDIIEILADKME----RSTSCTIQELANAM 331
G +DI L +M + CT L N +
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P++ L+ LCK V +A++ + ++ P V TY+ L+ GL VG
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A KL +EM D + + ++++A CK G + +AH +LR M G +P ++++
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + R++ M ++PN T+N ++++ C + ++ M +G
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC + A L M ++ +YN ++K + +F+ A
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+++E M GF Y + V
Sbjct: 693 KLFEEMRTHGFIAEKEIYDIFV 714
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-------TYSILVRGLGDVGELSEARKLF 67
+L+ ++ H+ V + F D T K + + + L + G L EA KLF
Sbjct: 146 RLVFEFWEKPHLDVGNSF-DRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLF 204
Query: 68 DEMLERKCPVDILAHNSLLEAMCKA-GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D++L V + + N L + + I A + RE +G + SY+I +H C+
Sbjct: 205 DKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQ 264
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ +L M+ VP+V +Y+ I+ C+ E++ + +L++E+ +G P++++
Sbjct: 265 LGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYT 324
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN+I+++ C V A +++ M + + PD Y ++ + G ++++ M+
Sbjct: 325 YNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMK 384
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ P TY+ M+HGLC + GK+ EA K F M+ +G+ P
Sbjct: 385 RKKIVPDFVTYTSMIHGLC-QAGKVVEARKLFSEMLSKGLKP 425
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 160/304 (52%), Gaps = 4/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G++P Y LL ALCK VK A + F++ + +F P ++ ++ L+ G G+L
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKL 252
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+++ +M E DI+ +LL AG + +A+ ++ +MR G EP+ Y++
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 121 IHAFCEAND-IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + RV M+RY ++ TY +I CK +++ Y +LD+M ++G
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + +Y I+ H + + L LI +M + PD YN+V++L ++G A
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLR 297
+W ME G P V T+ +M++G +G L EAC +F+ MV GI P T++ L
Sbjct: 433 RLWNEMEANGLSPGVDTFVIMINGFT-SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Query: 298 NRLV 301
N LV
Sbjct: 492 NNLV 495
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
S++ + K G++ EMR E P+ F + + F AN + VLD M
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEM 193
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+Y L P+ + + C++ LCKN V+EA ++ ++M E+ P+ + ++L C ++
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PNLRYFTSLLYGWCREGKL 252
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A ++ +M + + PD + +L G+ A ++ M KRGF P+V+ Y+V+
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 261 VHGLCKKKGKLEEACKYF 278
+ LC+ + +++EA + F
Sbjct: 313 IQALCRTEKRMDEAMRVF 330
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 126/346 (36%), Gaps = 82/346 (23%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P I LL + A+ D K F P V Y++L++ L +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 -LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-------- 110
+ EA ++F EM C DI+ + +L+ CK G ID+ + +L +MR G
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 111 ---------------------------EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
PD Y++ I C+ ++ R+ + M+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--ANP------------------- 182
L P V T+ +I + EA EM+ RG + P
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 183 ---DEWSYNAILAYHCD---------------RAEVNMALRLITRMTKENVMPDRHTYNM 224
D WS + C+ + V A M + ++MP +TY
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
++K L ++ A E+ E + K +++ M + KKKG+
Sbjct: 562 LMKGLNKLYNRTIAAEITEKVVK------MASEREMSFKMYKKKGE 601
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 46/360 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------------------------- 33
M E G +P+ + ++H LC + + A Q F
Sbjct: 175 MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG 234
Query: 34 --DNA--------KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
D+A +P V TYS L+ GL G+L EA L M C +I+ +N
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 294
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
++++ CK G IDEA+ +L EM G +P+ +Y++ + AFC+ +++ M
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
VPN+FTYN ++ CK ++VE A QLL MI++G P+ SYN ++A C +V+
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L+ +M N +PD T+N ++ + + R D A E++ +++ G P++ TY+ +VHG
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474
Query: 264 LCKKKGKLEEACKYF--EMMVDEGIPP----YSSTVEML-RNRLVGLGFLDIIEILADKM 316
LCK + + ++A +Y EM +G P Y++ ++ L +++ V + +++L+D +
Sbjct: 475 LCKSR-RFDQA-EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 170/302 (56%), Gaps = 7/302 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G P+++ + +LH CK V+ A + P V +Y+ ++ GL + +
Sbjct: 70 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQ 129
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ D+M++R C +++ + +L++ C+ G++D A ++R+M G P+A +Y+
Sbjct: 130 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189
Query: 120 FIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+H C + S ++ M+ + P+VFTY+ I+ L K+ KV++A +L++ M+ +
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ +Y+++L C +++ A L+ RMT+ P+ TYN ++ ++GR D A
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ E M G P+V TY+V++ C K GK E+A E+MV++G P Y+S ++
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFC-KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 368
Query: 295 ML 296
M
Sbjct: 369 MF 370
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 153/271 (56%), Gaps = 3/271 (1%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
++RGL D G+ S+A F EM + CP D + +N+++ + K+ +D+A +L EM G
Sbjct: 16 ILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
P+ FSY+ +H FC+AN + + +L+ M P+V +Y +I LCK ++V+EA
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+++D+MI+RG P+ +Y ++ C +++ A+ L+ +MT+ P+ TYN ++ L
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194
Query: 230 VRVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ D A ++++ ME+ G P V TYS +V L K GK+++AC+ E MV +G P
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLV-KSGKVDDACRLVEAMVSKGCSP 253
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
T L + L G LD L +M RS
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
+L LC A F P TY+ ++ GL L +A +L +EM++
Sbjct: 15 SILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++ ++N++L CKA ++ A +L +M G PD SY+ I+ C+ + +
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
RV+D M + PNV TY ++ C+ ++ A +L+ +M ERG P+ +YN I+
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194
Query: 195 CDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C +++ AL+L M + + PD TY+ ++ LV+ G+ D A + E+M +G P+
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
V TYS ++HGLC K GKL+EA + M G P T + + LG +D
Sbjct: 255 VVTYSSLLHGLC-KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 151/290 (52%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P++ L+ C+ + A + + + P TY+ ++ GL +
Sbjct: 140 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRK 199
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A +LF EM E CP D+ ++++++++ K+G +D+A ++ M S G P+ +YS
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+H C+A + +L M R PN+ TYN II CK +++EAY LL+EM++
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +Y +L C + A+ L+ M ++ +P+ TYN +L + + +RA
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ SM ++G P+V +Y+ ++ GLCK K+ E E M+ P
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKAT-KVHEGVLLLEQMLSNNCVP 428
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I + ++ A+CK V +A++ F+ + TP + TY+ LV GL +A L
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 487
Query: 67 FDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
EM ++ C DI+ +N++++ +CK+ +D A+ + +M S G PD +YSI I + C
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 547
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + VL+ M + P TY +I CK +++A ++L ++ +G+ PD
Sbjct: 548 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 607
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+++ + + R + A L+ M + ++PD TYN +LK R + A +++E M
Sbjct: 608 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G P +TY+ +V L KK + + + MVD G
Sbjct: 668 RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 707
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGEL 60
E G P++ + L+H LCK + A K +P + TY+ ++ GL +
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A KLF +ML D + ++ ++ ++CK +DEA+ +L M G +P A +Y
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ ++ +L + P+V T++ I L K ++ +A +LL+ M+ G
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF-DRAT 239
PD +YN +L CD + A+ L M + PD TY ++ LV + D
Sbjct: 638 VPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLA 697
Query: 240 EVWESMEKRGF 250
EV +SM GF
Sbjct: 698 EVSKSMVDTGF 708
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 162/301 (53%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M FGI P +Y L ++++ C V A K P T++ LVRGL VG+
Sbjct: 82 MDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK 141
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +FD+M+ +++ + +L+ +CK + EA + EM + G PD F+Y+
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M + ++PNV + N ++ LCK KV EA+ ++D MI+ G
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y A++ HC R+E++ A+++ M + + + +YN ++ ++ R D+A
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAM 321
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TYS ++HGLC G+L++A F MV G P T +L +
Sbjct: 322 YLFEEMCRQELIPNTMTYSTLIHGLC-HVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 300 L 300
L
Sbjct: 381 L 381
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 150/288 (52%), Gaps = 6/288 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M+ GI P I+ + L+HALC + KHV + K + P V + +I+V L
Sbjct: 187 MIAKGISPDIFTYNSLIHALCNLCEWKHVTTL--LNEMVKSKIMPNVVSLNIVVDALCKE 244
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+++EA + D M++ D++ + +L++ C +DEA + M G + SY
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY 304
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ I + + M R L+PN TY+ +I LC ++++A L +EM+
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA 364
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ +Y+ +L Y C + A+ L+ + N+ PD YN+ + + R G +
Sbjct: 365 CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEA 424
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A +++ ++ RG P V T+++M+ GLC K+G L+EA K F M + G
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLC-KRGLLDEASKLFREMDENG 471
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P++ L+ ++ ALCK V AH D + P V TY+ L+ G E
Sbjct: 222 MVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSE 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+FD M+ C +++++N+L+ CK ID+A + EM P+ +YS
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + + M +PN+ TY+ ++ LCKN ++ EA LL +
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD YN + C ++ A L + + + PD T+N++++ L + G D A+
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M++ G + TY+ + GL + K A + E M+ G ST +L
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNN-KTSRAIQLLEEMLARGFSADVSTTALLVKM 520
Query: 300 L 300
L
Sbjct: 521 L 521
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + ++ L+ + + S L +M P D+ ++ + C +D A +
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L ++ +G +PD +++ + C I V D M PNV TY ++ LCK
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ ++ EA L EMI +G +PD ++YN+++ C+ E L+ M K +MP+ +
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N+V+ L + G+ A +V + M + G P V TY+ ++ G C + +++EA K F+MM
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRS-EMDEAVKVFDMM 292
Query: 282 VDEG 285
V G
Sbjct: 293 VRNG 296
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P + + + +C+ ++ A F N A P V T++I++RGL G L EA
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
KLF EM E C + +N++ + + + A +L EM + G D + ++ +
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Query: 125 CEANDIHSVFRVL 137
+ SV ++L
Sbjct: 522 SDDGLDQSVKQIL 534
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 3/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + L+ CK + A Q D + +P V TY+ ++R L D G+L EA
Sbjct: 175 GAVPDVITYNVLISGYCKTGEIGSALQLLD--RMSVSPDVVTYNTILRTLCDSGKLKEAM 232
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D ++R+C D++ + L+EA CK + +A +L EMR G +PD +Y++ I+
Sbjct: 233 EVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + R L+ M Y PNV T+N I+R +C + +A + L EMI +G +P
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M + P+ +YN +L L + + +RA E +
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG YP + TY+ ++ LC K GK++ A + + +G P T + + L +G
Sbjct: 413 MVSRGCYPDIVTYNTLLTALC-KDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVG 471
Query: 305 FLDIIEILADKME 317
D L D+M+
Sbjct: 472 KTDDAIKLLDEMK 484
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 151/286 (52%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A CK V A + D + + P V TY++L+ G+ G L EA +
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M C +++ HN +L +MC G +A L EM G P +++I I+ C
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I VL+ M ++ PN +YN ++ LCK++K+E A + LD M+ RG PD +
Sbjct: 365 KGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V++A+ ++ ++ + P TYN V+ L +VG+ D A ++ + M+
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMK 484
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+G P + TYS +V GL ++GK++EA +F + + G+ P + T
Sbjct: 485 GKGLKPDIITYSTLVGGL-SREGKVDEAIAFFHDLEEMGVKPNAIT 529
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP + + L++ +CK + A +F ++ + P V T++I++R + G
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A K EM+ + C ++ N L+ +C+ G I A +L +M G P++ SY+
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HA C+ + LD M P++ TYN ++ LCK+ KV+ A ++L+++ +G
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + + A++L+ M + + PD TY+ ++ L R G+ D A
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +E+ G P+ TY+ ++ GLCK + + A + MV G P ++ +L
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTV-RAIDFLAYMVARGCKPTETSYMIL 568
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL E K ++M+ R DI+A SL+ +CK G +A ++ + GA PD +Y
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I +C+ +I S ++LD R ++ P+V TYN I+R LC + K++EA ++LD ++
Sbjct: 184 NVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
R PD +Y ++ C + V A++L+ M + PD TYN+++ + + GR D
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A M G P+V T+++++ +C G+ +A K+ M+ +G P T +L
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMC-STGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359
Query: 298 NRLVGLGFLDIIEILADKMERSTSCTIQELA 328
N L G + + +KM + CT L+
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQH-GCTPNSLS 389
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 34/304 (11%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + + L+RGL G+ +A ++ + + + D++ +N L+ CK G I A +
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202
Query: 102 LREM------------------------------RSIGAE--PDAFSYSIFIHAFCEAND 129
L M R + E PD +Y+I I A C+ +
Sbjct: 203 LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG 262
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ ++LD M+ P+V TYN +I +CK +++EA + L+ M G P+ ++N
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
IL C A + + M ++ P T+N+++ L R G RA +V E M + G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI- 308
P+ +Y+ ++H LCK K K+E A +Y ++MV G P T L L G +D+
Sbjct: 383 CTPNSLSYNPLLHALCKDK-KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 309 IEIL 312
+EIL
Sbjct: 442 VEIL 445
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 13/311 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + +H TP +Y+ L+ L +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + D M+ R C DI+ +N+LL A+CK G +D A +L ++ S G P +Y+
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++LD MK L P++ TY+ ++ L + KV+EA ++ E G
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+I+ C + A+ + M P +Y ++++ L G A
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ + RG S V+V K+ YF ++ S E+
Sbjct: 583 ELLNELCSRGVVKKSSAEQVVV--------KIPFNVFYFYFLLHLLFNGLGSHREI---- 630
Query: 300 LVGLGFLDIIE 310
VG+GF I+E
Sbjct: 631 FVGVGFFMILE 641
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 5/244 (2%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+N+ L + + G ++E L +M G PD + + I C+ RV++ ++
Sbjct: 113 NNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILE 172
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
VP+V TYN +I CK ++ A QLLD M +PD +YN IL CD ++
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLK 229
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A+ ++ R + PD TY ++++ + +A ++ + M +G P V TY+V++
Sbjct: 230 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 289
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERST 320
+G+C K+G+L+EA ++ M G P T ++ + G ++D + LA+ + +
Sbjct: 290 NGIC-KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348
Query: 321 SCTI 324
S ++
Sbjct: 349 SPSV 352
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 162/300 (54%), Gaps = 7/300 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G P + ++HALCK ++ A +F + + E V T++I++ GL L
Sbjct: 85 MRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE--KNVITWTIMIDGLCKANRL 142
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA F +M ++ + +N L+ CK + A+ +L+EM+ G P+ +YS
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH FC + + +++ M +PN+ TYN ++ LC+N ++EAY+LLDEM ERG
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD++SY+ ++A C +++MAL++ + + PD Y+ ++ L + GR D A +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
++E M + P V T++ ++ GLCK +L+EA + E M D P YSS ++ L
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGD-RLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G P++ + LL LC+ + A++ D + P +Y L+ GL G+
Sbjct: 222 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K+F++ CP D++A+++L+ +CKAG +DEA + +MR EPD +++
Sbjct: 282 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTA 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +VL++M+ N PNV TY+ +I LCK +V +A ++ MI RG
Sbjct: 342 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ C V+ AL L+ MT +PD TYN ++ L + GR A
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M+ + P V TYS ++ G CK + +++ A F+ M+ + + P T L
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLE-RIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Query: 300 LVGLGFLDIIEILADKMERS 319
G +D E L ++M S
Sbjct: 521 YCNAGLVDDAERLLEEMVAS 540
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E +P + L+ LCK ++ A Q + + TP V TYS L+ GL G+
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+++F M+ R +++ +NSL+ C +D A ++ EM + G PD +Y+
Sbjct: 387 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 446
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ R+ MK P+V TY+C+I CK E+++ A L D+M+++
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++ ++ +C+ V+ A RL+ M + PD +TY ++ +VGR A
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V + M KRG P+V TY+ ++ C + GK A + E MV G+ P T L
Sbjct: 567 RVLKRMAKRGCQPNVVTYTALIDAFC-RAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625
Query: 300 LVGLGFLDIIEILADKMERSTSC 322
G G L+ + +++ER +C
Sbjct: 626 FCGTGDLEEARKILERLERDENC 648
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 162/329 (49%), Gaps = 34/329 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G ++Y ++L AL + + + + H + TP V TY+++++GL G+L +A
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 64 RKLFDEMLER--------------------------------KCPVDILAHNSLLEAMCK 91
+L +EM E +C +++ +++ +CK
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCK 138
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
A + EA +M+ G P+ ++Y++ I+ FC+ + +H + +L MK L PNV T
Sbjct: 139 ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 198
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y+ +I C+ KV+ AY+L +M+E G P+ +YN +L+ C ++ A L+ M
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + PD+ +Y+ ++ L + G+ D A +V+E P V YS ++ GLC K G+L
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC-KAGRL 317
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+EACK FE M + P T L + L
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGL 346
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 159/320 (49%), Gaps = 6/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M G P I + L+ LCK A++ F + K +F P V TYS L+ G +
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR LFD+ML++ D++ ++L+E C AG +D+A +L EM + PD ++Y+
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + RVL M + PNV TY +I C+ K AY+LL+EM+ G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y +++ C ++ A +++ R+ + EN D Y +++ L R GR A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ E++++ G P Y ++ GLC+ K GK E + EM + P + E +
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE--EMTLSRKSRPNAEAYEAV 729
Query: 297 RNRLVGLGFLDIIEILADKM 316
L G + LAD++
Sbjct: 730 IQELAREGRHEEANALADEL 749
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G P+ + + L++ CK V A+ K P V TYS ++ G +
Sbjct: 152 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 211
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A KLF +M+E C +++ +N+LL +C+ G +DEA+ +L EMR G +PD FSY
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 271
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ I +V + + P+V Y+ +I LCK +++EA +L ++M E
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ A++ C + A +++ M N P+ TY+ ++ L + G+ A
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EV++ M RG P+V TY+ ++HG C G ++ A E M G P T L +
Sbjct: 392 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNG-VDSALLLMEEMTATGCLPDIITYNTLIDG 450
Query: 300 LVGLG 304
L G
Sbjct: 451 LCKTG 455
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
++ +N L EA+ +A IDE +L+ G P+ F+Y++ I C++ D+ +L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ M+ VP+ YN +I LCK +A M E N W+ ++ C
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM-ECEKNVITWTI--MIDGLCKA 139
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A +M K+ +P+ TYN+++ +V + RA + + M++ G P+V TY
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
S ++HG C++ K++ A K F MV+ G P T L + L G +D L D+M
Sbjct: 200 STVIHGFCRQT-KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G +P++ L+ A C+ VA++ + + P V TY L+ G G+
Sbjct: 572 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGD 631
Query: 60 LSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L EARK+ E LER C D+ A+ +++ +C+ G + A +L ++ G P Y
Sbjct: 632 LEEARKIL-ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 690
Query: 118 SIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I C+ ++ VL+ M PN Y +I++L + + EEA L DE++
Sbjct: 691 VALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++G + + ++YN + ++ ++ + P+ TY +V++ L + G D
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+A E+ E M + G P + Y+ ++H LCK + +A YF M
Sbjct: 77 KACELLEEMRESGPVPDAAIYNFVIHALCKARNT-AKALDYFRSM 120
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL ALCK VK A F++ + FTPT+K ++ L+ G G+L EA+ + ++ E
Sbjct: 91 LLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGF 150
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
DI+ +N+LL AG + +A+ +L+EMR EP+ S++ I A C + R
Sbjct: 151 EPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMR 210
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V M+ + TY +I CK K+ + Y+LLD MI++G P+ +Y I+A H
Sbjct: 211 VFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHE 270
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ E+ + L+ M K PD + YN+V++L ++G VW ME G P +
Sbjct: 271 KKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLD 330
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTVEMLRNRL 300
T+ +M+HG ++ L EAC++F+ MV G+ P Y + E+L + L
Sbjct: 331 TFVIMIHGFLSQRC-LVEACEFFKEMVGRGLLSAPQYGTLKELLNSLL 377
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 129 DIHSVFRVLDSMKRYNLVPNV----------FTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
D+ V+R+L K ++ VP + + C++ LCKN V+EA L ++M R
Sbjct: 57 DVEKVYRILR--KFHSRVPKLELALQESGVAHVFGCLLDALCKNGSVKEAASLFEDMRIR 114
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P + ++L C ++ A ++ ++ + PD YN +L G+ A
Sbjct: 115 -FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDA 173
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + M ++ P+V +++ ++ LC KK K+EEA + F M G P + T L
Sbjct: 174 YDLLKEMRRKECEPNVMSFTTLIQALCAKK-KMEEAMRVFFEMQSCGCPADAVTYTTL 230
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 1/333 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A F+N K FTP ++TY++L+ G V L
Sbjct: 189 MKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWCKVKNL 248
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++EM+++ DI+AHN +LE + ++ +A + M++ G PD SY+I
Sbjct: 249 MEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTIL 308
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C + + M P+ Y C+I ++++ Y LL EM E G
Sbjct: 309 IRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGC 368
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ + A R+ +MT+ + P HTYNM++K + ++
Sbjct: 369 PPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRA 428
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M ++GF P ++Y+V++ GL +G+ EACKY E M+++G+ L
Sbjct: 429 VWDEMSRKGFCPDDNSYTVLIGGLI-SQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADL 487
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
G DI+E LA +++ S + + + G
Sbjct: 488 SRGGNPDILEELAQRLKFSGKFGVSNVLASWAG 520
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIHAFCEANDIHSVFRV 136
D +NS++ + K + ML EM G D FS I + AF A + +
Sbjct: 128 DSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFS--IAMRAFAAAKERKKAVAM 185
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
+ MK+YN V T N ++ L + + +EA L + + R P+ +Y +L C
Sbjct: 186 FELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVLLNGWCK 244
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ A + M + PD +N++L+ L+R + A +++ M+ +G P V +
Sbjct: 245 VKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRS 304
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
Y++++ LC++ K+EEA +YF+ M+D G P ++ L + G G
Sbjct: 305 YTILIRYLCRQS-KMEEAVEYFQEMIDSGCKPDAAVYTCL---ITGFG 348
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 46/349 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------------------------- 33
M G+ P+I + +++ LCK + + F
Sbjct: 28 MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87
Query: 34 ---------DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV--DILAH 82
D + P V TYS+L+ GL VG + EAR+L EM + C V +I+ +
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147
Query: 83 NSLLEAMCKAGNIDEAHGMLREMR--SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
NS L+ +CK EA ++R +R S+ PD ++S I C+ I V D M
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 207
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
VPNV TYN ++ LCK +K+E A+ +++ M+++G PD +Y+ ++ C + V
Sbjct: 208 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267
Query: 201 NMALRLI----TRMTKENVM-PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ AL L+ +R NV+ PD+ T+N+++ + G F++A+ ++E M + P V
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 327
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
T+ ++ GLC K G++E A ++M + G+PP T L + L G
Sbjct: 328 TFGALIDGLC-KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ + L++ LCK ++ AH ++ TP V TYS+LV
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266
Query: 60 LSEARKLFDEMLERKCPVDIL-----AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
+ EA +L M R C ++L N L+ CKAGN ++A + EM + +PD
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
++ I C+A + + +LD M + PNV TYN ++ LCK+ ++EEA Q L+E
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+ G PD +Y +++ C + + AL+L++ + PD TYN+++ L + G+
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
++A V E M +G P T++ GL + G L + +++ +G+ P ++T
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGL-HRSGNLAGTMELLRVVLAKGMLPDATTCS 505
Query: 295 MLRNRLVGLGFLDIIEILADKME 317
+ + + G LD ++ + + E
Sbjct: 506 SILDWVCRSGKLDDVKAMIKEFE 528
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ P+I + L LCK+ A + + +P T+S L+ GL G++ E
Sbjct: 140 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 199
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +FD+M+ +++ +N+L+ +CKA ++ AH M+ M G PD +YS+ +
Sbjct: 200 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 259
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVF-----TYNCIIRKLCKNEKVEEAYQLLDEMIE 177
AFC+A+ + +L M PNV T+N +I CK E+A L +EM+
Sbjct: 260 AFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 319
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ PD ++ A++ C +V A ++ M V P+ TYN ++ L + GR +
Sbjct: 320 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 379
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + E M G P TY +V+ LC+ + ++A + + G P + T +L
Sbjct: 380 ACQFLEEMVSSGCVPDSITYGSLVYALCRAS-RTDDALQLVSELKSFGWDPDTVTYNILV 438
Query: 298 NRL 300
+ L
Sbjct: 439 DGL 441
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 51/355 (14%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+ D + +L +LC+ A + F + A+ PT+ TY+ ++ GL +L +LF
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+E++ER D++ +N+L++++CKAG+++EA + +M S G P+ +YS+ I+ C+
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 128 NDIHSVFRVLDSMKR--YNLVPNVFTYN-------------------------------- 153
I ++ M R +++PN+ TYN
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 154 -----CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+I LCK +++EA + D+MI G P+ +YNA++ C ++ A +I
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV-----STYSVMVHG 263
M + V PD TY++++ + R D A E+ M RG P+V T+++++ G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL----DIIEILAD 314
C K G E+A FE MV + + P T L + L G + DI++++ +
Sbjct: 301 AC-KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 3/347 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG +P Y LL ALCK VK A + F++ + F ++ ++ L+ G VG++
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M E DI+ + +LL AG + +A+ +LR+MR G EP+A Y++
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C+ + + +V M+RY +V TY ++ CK K+++ Y +LD+MI++G
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P E +Y I+ H + L L+ +M + PD YN+V++L ++G A
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 448
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS--STVEMLRN 298
+W ME+ G P V T+ +M++GL +G L EA +F+ MV G+ S T+++L N
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLA-SQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLN 507
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
++ L++ + + + +C + L+ + F K +E
Sbjct: 508 TVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---E 111
GD G L ++ R C I + S+++ + K G++ EMR E
Sbjct: 124 GDAGNLGYRFFVWAAKQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIE 182
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P+ F + + F A+ + VLD M ++ P+ + + C++ LCK+ V++A +L
Sbjct: 183 PELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 172 LDEMIERGANPDEWSYNAILAY-HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
++M R P Y L Y C ++ A ++ +M + PD Y +L
Sbjct: 241 FEDM--RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
G+ A ++ M +RGF P+ + Y+V++ LCK ++EEA K F
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD-RMEEAMKVF 345
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 164/332 (49%), Gaps = 41/332 (12%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +I + +++ C+ ++ A + D+ F P TY+ L+R L G + +A
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP--FAPDTFTYNPLIRALCVRGCVLDA 179
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+FD+ML R C ++ ++ LL+A CK +A +L EMRS G EPD +Y++ I+A
Sbjct: 180 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINA 239
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C D+ +VL+S+ Y P+ TY +++ LC +E+ EEA +LL +M PD
Sbjct: 240 MCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPD 299
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTK------------------------------- 212
E ++NA++ C + V A +++ +M++
Sbjct: 300 EVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLK 359
Query: 213 --------ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+N +PD+ T+N ++ L + G FDRA +V + M + G P ++TY+ +V G
Sbjct: 360 ELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGF 419
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K K EEA +MV G+ P ++T + L
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 145/294 (49%), Gaps = 7/294 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G PS+ LL A CK K A D + + P + TY++L+ + G+
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+ + + C D + + +L+++C + +EA +L +M S PD +++
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD----EM 175
I + C+ + +VL M + P++ TY+ I+ LCK +V+EA +LL EM
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK-LLVRVGR 234
+ + PD+ ++N I+ C + + A++++ M++ +PD TYN ++ L + +
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ A ++ M G P +TY + GL ++ ++E A F + G+ P
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGL-SREDEMERAIGMFRRVQAMGLSP 478
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 141/281 (50%), Gaps = 9/281 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+ +G KP +L +LC + + A + ++ P T++ ++ L G
Sbjct: 256 LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGF 315
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE----MRSIGAEPDAF 115
+ A K+ +M E C DI+ ++S+++ +CK +DEA +L+E M S PD
Sbjct: 316 VGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQV 375
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDE 174
+++ I + C+ +V+D M + +P++ TYNCI+ LCK+ K EEA LL+
Sbjct: 376 TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNL 435
Query: 175 MIERGANPDEWSYNAILAYHCDRA-EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M+ G PD +Y + LA+ R E+ A+ + R+ + PD+ YN +L L +
Sbjct: 436 MVSNGLCPDTTTYKS-LAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKW 494
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
R D A + + M G P STY ++V G+ +G LEEA
Sbjct: 495 RTDLAIDFFAYMVSNGCMPDESTYIILVEGI-AYEGFLEEA 534
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 8/284 (2%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+RGL GEL A +L + ++ N L++ +C G + +A R + ++G
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAE---RVVEALGP 124
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+Y+ ++ +C A +I + R++DS+ P+ FTYN +IR LC V +A
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALA 181
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+ D+M+ RG +P +Y+ +L C + A+ L+ M + PD TYN+++ +
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
G A +V S+ G P TY+ ++ LC + + EEA K M P
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSE-RWEEADKLLTKMFSNDCAPDE 300
Query: 291 STVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
T + L GF+ ++LA E + I ++ M G
Sbjct: 301 VTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDG 344
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+KP ++ + ++ +CK V A + N + + + P V +Y+IL+R L + G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGK 313
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KL +M KC +++ ++ L+ +C+ G I+EA +L+ M+ G PDA+SY
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC + L++M +P++ YN ++ LCKN K ++A ++ ++ E G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ SYN + + + AL +I M + PD TYN ++ L R G D A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M F+PSV TY++++ G CK ++E+A E MV G P +T +L
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAH-RIEDAINVLESMVGNGCRPNETTYTVL--- 549
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 550 IEGIGF 555
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 8 PSIYDLDQLLHALCKRKHV----KVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
P + ++ +LC R + KV +Q DN + PTV TY+IL+ G + E
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ----PTVITYTILIEATMLEGGVDE 246
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A KL DEML R D+ +N+++ MCK G +D A M+R + G+EPD SY+I +
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLR 306
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A +++ M PNV TY+ +I LC++ K+EEA LL M E+G P
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +SY+ ++A C +++A+ + M + +PD YN VL L + G+ D+A E++
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ + G P+ S+Y+ M L K+ EMM + GI P T + + L
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCR 485
Query: 303 LGFLD-IIEILAD 314
G +D E+L D
Sbjct: 486 EGMVDEAFELLVD 498
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 157/303 (51%), Gaps = 3/303 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELS 61
+FG +P ++ + L++ CK + A + D + +F+P TY+I++ L G+L
Sbjct: 152 KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K+ +++L C ++ + L+EA G +DEA ++ EM S G +PD F+Y+ I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + F ++ +++ P+V +YN ++R L K EE +L+ +M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y+ ++ C ++ A+ L+ M ++ + PD ++Y+ ++ R GR D A E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
E+M G P + Y+ ++ LC K GK ++A + F + + G P SS+ + + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 302 GLG 304
G
Sbjct: 450 SSG 452
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 147/288 (51%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G P + +L+ +++ A + + + P V Y+ L+ G + +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRI 174
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A ++ D M + D + +N ++ ++C G +D A +L ++ S +P +Y+I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A + +++D M L P++FTYN IIR +CK V+ A++++ + +G+
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGS 294
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD SYN +L ++ + +L+T+M E P+ TY++++ L R G+ + A
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M+++G P +Y ++ C ++G+L+ A ++ E M+ +G P
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVAIEFLETMISDGCLP 401
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 71/293 (24%)
Query: 90 CKAGNIDEAHGMLREMRSIG----------------------------------AEPDAF 115
C++GN E+ +L M G +PD F
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK----------- 164
+Y+ I+ FC+ N I RVLD M+ + P+ TYN +I LC K
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 165 ------------------------VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
V+EA +L+DEM+ RG PD ++YN I+ C V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A ++ + + PD +YN++L+ L+ G+++ ++ M P+V TYS++
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEIL 312
+ LC + GK+EEA ++M ++G+ P + + + L G LD+ IE L
Sbjct: 340 ITTLC-RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
I + C++ E+ LL+ M+ +G NPD ++ + A+R++ + K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD YN ++ ++ R D AT V + M + F P TY++M+ LC +GKL+ A
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC-SRGKLDLA 212
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K ++ + P T +L + G +D L D+M
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + ++ LC+ V A + D EF P+V TY+I++ G
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + + M+ C + + L+E + AG EA + ++ I DA S
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI----DAISEYS 579
Query: 120 FIHAFCEANDIHSVFRVLDSMKR 142
F +H F +L+ ++R
Sbjct: 580 F-------KRLHRTFPLLNVLQR 595
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 155/286 (54%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P Y LL ALCK VK A F++ + F+P++K ++ L+ G G+L
Sbjct: 177 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKHFTCLLYGWCKEGKL 236
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M E DI+ +N+LL AG + +A +L+E+R G +P+A SY+I
Sbjct: 237 LEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTIL 296
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C + RV M+R +V TY ++ CK +++ YQ+L MI++G
Sbjct: 297 IQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGH 356
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ +Y ++ H + E+ L+ M K +PD YN+V++L ++G + +
Sbjct: 357 MPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGEVNAGVD 416
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
W ME G P + T+ +M++G G L EAC+YF+ MV+ G+
Sbjct: 417 AWNEMEVSGLSPGLDTFVIMINGFL-GHGYLVEACQYFKEMVERGL 461
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 12/232 (5%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMR---SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
+ ++++ + K +L EMR S+ + F + + F + ++ VLD
Sbjct: 118 YKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFV--VVMRRFASSRMVNKAIEVLD 175
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M +Y P+ + + C++ LCKN V+EA L ++M R +P + +L C
Sbjct: 176 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FSPSLKHFTCLLYGWCKEG 234
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++ A ++ +M + PD YN +L G+ A ++ + + ++G P+ ++Y+
Sbjct: 235 KLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYT 294
Query: 259 VMVHGLCKKKGKLEEACKYFEMM----VDEGIPPYSSTVE-MLRNRLVGLGF 305
+++ LC ++ K++EA + F M D + Y++ V + R++ G+
Sbjct: 295 ILIQALCGQE-KMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGY 345
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G P + + ++ CK V ++ + +P + T+ I++ G G
Sbjct: 386 MQKIGCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGY 445
Query: 60 LSEARKLFDEMLERKC----PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
L EA + F EM+ER IL LL A+ + ++ A + + + G E +
Sbjct: 446 LVEACQYFKEMVERGLLSSRQYGIL--KDLLNALLRGEKLELAKDLWSCIVTKGCELNVD 503
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
S++I+IHA + M +L+P T+ ++R L K
Sbjct: 504 SWTIWIHALFSNGHVKEACSYCLDMMDADLMPKPETFAKLMRGLRK 549
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 156/286 (54%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M+++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ A R+ +M + + P HT+NM++K ++
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VWE M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLI-GEGKSREACRYLEEMLDKGM 539
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D +NS++ + K + +L EM + G +++I + AF A + +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ MK+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 311
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A R+ M + + PD +N++L+ L+R + A +++ M+ +G P+V +Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++M+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 372 TIMIRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 414
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + A + +M EP ++++ + +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V + M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Query: 184 EWSYNAILA 192
YN A
Sbjct: 543 LIDYNKFAA 551
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 166/320 (51%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G P++ + LL LC+ + A++ D + P +Y L+ GL G+
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 162
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K+F++ CP D++A+++L+ +CK G +DEA + +MR EPD +++
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +VL++M+ N PNV TY+ +I LCK +V +A ++ MI RG
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ C V+ AL L+ MT +PD TYN ++ L + GR A
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M+ + P V TYS ++ G CK + +++ A F+ M+ + + P T L
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLE-RIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Query: 300 LVGLGFLDIIEILADKMERS 319
G +D E L ++M S
Sbjct: 402 YCNAGLVDDAERLLEEMVAS 421
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 161/323 (49%), Gaps = 2/323 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E +P + L+ LCK ++ A Q + + TP V TYS L+ GL G+
Sbjct: 208 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 267
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+++F M+ R +++ +NSL+ C +D A ++ EM + G PD +Y+
Sbjct: 268 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 327
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ R+ MK P+V TY+C+I CK E+++ A L D+M+++
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++ ++ +C+ V+ A RL+ M + PD +TY ++ +VGR A
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V + M KRG P+V TY+ ++ C + GK A K E MV G+ P T L
Sbjct: 448 RVLKRMAKRGCQPNVVTYTALIDAFC-RAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506
Query: 300 LVGLGFLDIIEILADKMERSTSC 322
G G L+ + +++ER +C
Sbjct: 507 FCGTGDLEEARKMLERLERDENC 529
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 142/257 (55%), Gaps = 5/257 (1%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V T++I++ GL L EA F +M ++ + +N L+ CK + A+ +L+
Sbjct: 7 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
EM+ G P+ +YS IH FC + + +++ M +PN+ TYN ++ LC+N
Sbjct: 67 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++EAY+LLDEM ERG PD++SY+ ++A C +++MAL++ + + PD Y+
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ L + GR D A +++E M + P V T++ ++ GLCK +L+EA + E M D
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD-RLQEAQQVLETMED 245
Query: 284 EGIPP----YSSTVEML 296
P YSS ++ L
Sbjct: 246 RNCTPNVITYSSLIDGL 262
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 159/320 (49%), Gaps = 6/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M G P I + L+ LCK A++ F + K +F P V TYS L+ G +
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR LFD+ML++ D++ ++L+E C AG +D+A +L EM + PD ++Y+
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + RVL M + PNV TY +I C+ K AY+LL+EM+ G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y +++ C ++ A +++ R+ + EN D Y +++ L R GR A
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA 552
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ E++++ G P Y ++ GLC+ K GK E + EM + P + E +
Sbjct: 553 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLE--EMTLSRKSRPNAEAYEAV 610
Query: 297 RNRLVGLGFLDIIEILADKM 316
L G + LAD++
Sbjct: 611 IQELAREGRHEEANALADEL 630
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G P+ + + L++ CK V A+ K P V TYS ++ G +
Sbjct: 33 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 92
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A KLF +M+E C +++ +N+LL +C+ G +DEA+ +L EMR G +PD FSY
Sbjct: 93 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 152
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ I +V + + P+V Y+ +I LCK +++EA +L ++M E
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ A++ C + A +++ M N P+ TY+ ++ L + G+ A
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EV++ M RG P+V TY+ ++HG C G ++ A E M G P T L +
Sbjct: 273 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNG-VDSALLLMEEMTATGCLPDIITYNTLIDG 331
Query: 300 LVGLG 304
L G
Sbjct: 332 LCKTG 336
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
E + +++I I C+AN + MK+ VPN +TYN +I CK KV AY
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
LL EM E G P+ +Y+ ++ C + +V+ A +L +M + MP+ TYN +L L
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
R G D A E+ + M +RG P +Y ++ GLCK GK++ A K FE + PP
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT-GKIDMALKVFEDNSNGDCPPDV 182
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
L L G LD L +KM R SC
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKM-RENSC 213
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G +P++ L+ A C+ VA++ + + P V TY L+ G G+
Sbjct: 453 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGD 512
Query: 60 LSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L EARK+ E LER C D+ A+ +++ +C+ G + A +L ++ G P Y
Sbjct: 513 LEEARKML-ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 571
Query: 118 SIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I C+ ++ VL+ M PN Y +I++L + + EEA L DE++
Sbjct: 572 VALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 36/353 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P + + LLH CK + A + FD A K F P V TY+ L+ G +
Sbjct: 36 MIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADK 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH-------------------- 99
L EA+++ M+ D++ +NSL+ +CK G +DEA
Sbjct: 96 LDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLIS 155
Query: 100 GMLREMRSI-------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
G+ RE+R + G EP+ +Y+I I + + ++ F + + ++ L
Sbjct: 156 GLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE 215
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ TY I LCK +VE+A +L +M E+G PD S+NA++ C V+ A L
Sbjct: 216 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVL 275
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
++ M + P+ ++N ++ R G++ +A ++ M KRG P+V TY+++V GLCK
Sbjct: 276 LSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 335
Query: 267 --KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
++G+++EA F+ M+++G P T L + L G LD L ME
Sbjct: 336 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 157/282 (55%), Gaps = 5/282 (1%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
KH F P TY+ L+ GL + G +S+A+ L++ M++ D++ +N+LL CK G +D
Sbjct: 3 KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EA + G PD +Y+ I+ FC+A+ + R+L M NLVP+V TYN ++
Sbjct: 63 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC-DRAEVNMALRLITRMTKENV 215
LCKN +V+EA L+ +++G +P+ +Y+ +++ C + V+ AL+L + K+
Sbjct: 123 NGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P+ TYN+++ L++ R + A E++ + K G P TY+V + GLC K G++E+A
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC-KAGRVEDAL 238
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ M ++G P + + N L +D E+L ME
Sbjct: 239 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 280
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 4/261 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + + L+ L K V A + F KH P TY++ + GL G + +A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +M E+ C D+++HN+++ +CK +DEA +L M + G P+A S++ I
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE---KVEEAYQLLDEMIERGA 180
C A M + + P V TYN ++ LCK +++EA L D MIE+G
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +Y+A++ +++ A RL+ M + +P+ +TYN ++ L + + D A E
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417
Query: 241 VWESMEKRGFYPSVSTYSVMV 261
++ +M ++G P TY ++
Sbjct: 418 LFVAMVEKGCVPDTITYGTII 438
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
MR G P+ +Y+ + C + + + M + P+V TYN ++ CK +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA ++ D ++RG PD +YNA++ C +++ A R++ RM EN++PD TYN
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ L + GR D A + + +GF P+V TYS ++ GLC++ + EA K F ++ +
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 285 GIPPYSSTVEMLRNRLV 301
G P T +L + L+
Sbjct: 178 GYEPEVPTYNILIDGLL 194
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P + + +++ LCK K V A + + +P +++ L+ G G+
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKA---GNIDEAHGMLREMRSIGAEPDAFS 116
+A F EML+R ++ +N L++ +CKA G I EA + M G PD +
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS I +A + R+L +M+ +PNV+TYN +I LC EKV+EA +L M+
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMV 423
Query: 177 ERGANPDEWSYNAILA 192
E+G PD +Y I++
Sbjct: 424 EKGCVPDTITYGTIIS 439
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M+++ PN TYN ++ LC ++ +A L + MI+ G +PD +YN +L C E
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
++ AL++ K +PD TYN ++ + + D A + + M P V TY+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRNRLVGL 303
+V+GLC K G+++EA ++VD+G P YS+ + L L G+
Sbjct: 121 LVNGLC-KNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGV 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH---VKVAHQFFDNAKHEF-TPTVKTYSILVRGLGD 56
M++ G+KP++ + L+ LCK + +K A FD + P V TYS L+ GLG
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+L +AR+L M + C ++ +NSL+ +C +DEA + M G PD +
Sbjct: 374 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433
Query: 117 YSIFIHA 123
Y I A
Sbjct: 434 YGTIISA 440
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 169/336 (50%), Gaps = 37/336 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-----------KVAHQ------------------ 31
M FGI P+IY L L+++ C V K+ HQ
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 32 ------FFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
FD E F P V TY L+ GL VG S A +L M+++ C ++ A+N+
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+++++CK + EA + EM + G PD F+Y+ IHA C + V +L+ M
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++P+V ++N ++ LCK KV EA+ ++D+MI+RG P+ +Y A++ HC +E++ A+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M + MP+ +YN ++ ++ R D+A ++ M ++ P TYS ++HGL
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
C + +L++A F MV P T +L + L
Sbjct: 387 CHVE-RLQDAIALFHEMVACSQIPNLVTYRILLDYL 421
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 8/292 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+ PS D ++LL ++ K KH + ++HQ P + T IL+
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM---DSFGIPPNIYTLHILINSFCH 108
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + A + ++L+ D +L+ + G I EA + +M G PD +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I+ C+ + + R+L SM + N PNVF YN II LCK+ +V EA+ L EM+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +PD ++YN+++ C+ E L+ M +MPD ++N V+ L + G+
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A +V + M +RG P+V TY+ ++ G C +++EA K F+ MV +G P
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS-EMDEAVKVFDTMVCKGCMP 339
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P I+ + L+HALC K VA + + P V +++ +V L G+
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA + D+M++R +++ + +L++ C +DEA + M G P+ SY+
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ I + M R L+P+ TY+ +I LC E++++A L EM+
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +L Y C + A+ L+ + N+ PD N+ + + R G + A
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 466
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+++ ++ +G P V TYS+M++GLC ++G L+EA K F M + G
Sbjct: 467 DLFSNLSSKGLQPDVWTYSIMINGLC-RRGLLDEASKLFREMDENG 511
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P + + ++ ALCK V AH D + P V TY+ L+ G + E
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+FD M+ + C +++++N+L+ CK ID+A + EM PD +YS
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + M + +PN+ TY ++ LCKN + EA LL +
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD N + C E+ A L + ++ + + PD TY++++ L R G D A+
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M++ G + Y+ + G + + A + + MV G +ST+ +
Sbjct: 502 KLFREMDENGCTLNGCIYNTITRGFLRNN-ETSRAIQLLQEMVARGFSADASTMTLF 557
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ ML + P + N LL ++ K + + +M S G P+ ++ I I++FC
Sbjct: 49 FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N + F VL + + P+ T+ +IR + K+ EA L D+MI G PD +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C + A+RL+ M ++N P+ YN ++ L + + A ++ M
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+G P + TY+ ++H LC + + MVD I P
Sbjct: 229 TKGISPDIFTYNSLIHALC-NLCEWKHVATLLNEMVDSKIMP 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ + L++ CK + + K + F + + E P TYS L+ GL V
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF EM+ +++ + LL+ +CK + EA +L+ + +PD +I
Sbjct: 392 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A ++ + + ++ L P+V+TY+ +I LC+ ++EA +L EM E G
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ YN I E + A++L+ M D T + +K+L
Sbjct: 512 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+HN ID A M + P ++ + + + ++ +
Sbjct: 27 LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + + PN++T + +I C +V A+ +L ++++ G PD ++ ++ +
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ AL L +M E PD TY ++ L +VG A + SM ++ P+V Y+
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
++ LCK + ++ EA F MV +GI P Y+S + L N
Sbjct: 207 IIDSLCKDR-QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+M S+ A + S++ F N I + M R P+ +N ++ + K +
Sbjct: 16 QMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMK 75
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
L +M G P+ ++ + ++ C V A ++ ++ K PD T+
Sbjct: 76 HHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFT 135
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ + G+ A +++ M GF P V TY +++GLC K G A + MV
Sbjct: 136 TLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC-KVGNTSAAIRLLGSMVQ 194
Query: 284 EGIPP----YSSTVEML-RNRLVGLGF 305
+ P Y++ ++ L ++R V F
Sbjct: 195 KNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV P++ LL LCK +++ A + P ++ +I + G+ GE
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 461
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR LF + + D+ ++ ++ +C+ G +DEA + REM G + Y+
Sbjct: 462 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNT 521
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
F N+ ++L M + T ++ L + + Q+L E ++
Sbjct: 522 ITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 3/310 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIK + L+ LC K A + P V T+S L+ G+L EA
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L++EM+ R D + +NSL++ CK + EA+ M M S G EPD +YSI I++
Sbjct: 364 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + R+ + L+PN TYN ++ C++ K+ A +L EM+ RG P
Sbjct: 424 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 483
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E+N AL + +M K + YN+++ + + D A ++
Sbjct: 484 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 543
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RNRLVG 302
S+ +G P V TY+VM+ GLC KKG L EA F M ++G P T +L R L G
Sbjct: 544 SLSDKGVKPDVVTYNVMIGGLC-KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 602
Query: 303 LGFLDIIEIL 312
G + +E++
Sbjct: 603 SGLISSVELI 612
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE+G +P +L+ LCK + +A F + +V YSI++ L G
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF+EM + D++ ++SL+ +C G D+ MLREM PD ++S
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + + + M + P+ TYN +I CK + EA Q+ D M+ +G
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ +C V+ +RL ++ + ++P+ TYN ++ + G+ + A
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+++ M RG PSV TY +++ GLC G+L +A + FE M
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLC-DNGELNKALEIFEKM 510
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 3/324 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E IK S+ ++ +LCK A F+ + + V TYS L+ GL + G+
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ K+ EM+ R D++ ++L++ K G + EA + EM + G PD +Y+
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N +H ++ D M P++ TY+ +I CK ++V++ +L E+ +G
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C ++N A L M V P TY ++L L G ++A
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E M+K + Y++++HG+C K+++A F + D+G+ P T ++
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNAS-KVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563
Query: 300 LVGLGFLDIIEILADKMERSTSCT 323
L G L ++L KM + CT
Sbjct: 564 LCKKGSLSEADMLFRKM-KEDGCT 586
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE +P + + L++ LC + V A D ++ F P TY ++ L G
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF +M ER ++ ++ +++++CK G+ D+A + EM G + D +YS
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M N++P+V T++ +I K K+ EA +L +EMI RG
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+++ C ++ A ++ M + PD TY++++ + R D
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 434
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + +G P+ TY+ +V G C+ GKL A + F+ MV G+PP T +L +
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQS-GKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + +KM++S
Sbjct: 494 LCDNGELNKALEIFEKMQKS 513
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ +Y + +++ C++K + A A K + P T+S LV G G +SEA
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E K D++ ++L+ +C G + EA ++ M G +PD +Y ++
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + + M+ N+ +V Y+ +I LCK+ ++A L +EM +G D
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C+ + + +++ M N++PD T++ ++ + V+ G+ A E++
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TY+ ++ G CK+ L EA + F++MV +G P T +L N
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILIN 422
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + L+ CK + A+Q FD P + TYSIL+
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF E+ + + + +N+L+ C++G ++ A + +EM S G P +Y I
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 489
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ +++ + + M++ + + YN II +C KV++A+ L + ++G
Sbjct: 490 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 549
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ PD TYN++++ + +
Sbjct: 550 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 609
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E+ E M+ GF ST +++ L ++
Sbjct: 610 ELIEEMKVCGFSADSSTIKMVIDMLSDRR 638
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 12/256 (4%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERK---CPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
L G+ D+ ++++A LF+ M++ + P+D N L A+ + D G + M
Sbjct: 71 LRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDF---NRLCSAVARTKQYDLVLGFCKGME 126
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G E D ++ +I I+ +C + F VL + P+ T++ ++ C +V
Sbjct: 127 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 186
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA L+D M+E PD + + ++ C + V+ AL LI RM + PD TY VL
Sbjct: 187 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 246
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L + G A +++ ME+R SV YS+++ LC K G ++A F M +GI
Sbjct: 247 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC-KDGSFDDALSLFNEMEMKGI 305
Query: 287 PP----YSSTVEMLRN 298
YSS + L N
Sbjct: 306 KADVVTYSSLIGGLCN 321
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
KV +A L + MI+ P +N + + + ++ L M + D +T
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R + A V K G+ P T+S +V+G C + G++ EA + MV+
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE-GRVSEAVALVDRMVE 197
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P TV L N L G + +L D+M
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 159/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 117 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 176
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C D++ + S+++++CK + EA + +M G PD F+Y+
Sbjct: 177 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 236
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HA C + V +L+ M ++P+V ++ ++ LCK KV EA++++D MI+RG
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 296
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC ++E++ A+++ M ++ PD +Y ++ ++ + D+A
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ + P TY+ ++HGLC G+L++A F MV G P T +L +
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLC-HVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 415
Query: 300 L 300
L
Sbjct: 416 L 416
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 166/329 (50%), Gaps = 7/329 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
MV GI P I+ L+HALC + KHV N+K P V +S +V L
Sbjct: 222 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK--ILPDVVIFSTVVDALCKE 279
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+++EA ++ D M++R D++ + +L++ C +DEA + M G PD SY
Sbjct: 280 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 339
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + I + + M R +P+ TYN ++ LC ++++A L EM+
Sbjct: 340 TTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVA 399
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD +Y+ +L C + A+ L+ + N+ PD YN+++ + R G +
Sbjct: 400 RGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 459
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML- 296
A +++ ++ +G +PSV TY++M+HGLC K+G L EA K F M P T +
Sbjct: 460 ARDLFSNLSSKGLHPSVWTYNIMIHGLC-KRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 518
Query: 297 RNRLVGLGFLDIIEILADKMERSTSCTIQ 325
R L L I++L + + R S +
Sbjct: 519 RGFLQNNETLRAIQLLEEMLARGFSADVS 547
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL ++ K KH P V T +IL+ + + A +
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D +L+ +C G I EA + +M G +P+ +Y I+ C+
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + R+L SM++ N P+V Y II LCK+ +V EA+ L +M+ +G +PD ++
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C+ E L+ +M ++PD ++ V+ L + G+ A E+ + M
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+RG P V TY+ ++ G C + +++EA K F+MMV +G P
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQS-EMDEAVKVFDMMVRKGFAP 334
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 135/265 (50%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ C + + A + FD + F P V +Y+ L+ G + +
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM ++ D +N+L+ +C G + +A + EM + G PD +YSI
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C+ + +L +++ NL P++ YN II +C+ ++E A L + +G
Sbjct: 412 LLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 471
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P W+YN ++ C R +N A +L M + PD TYN + + ++ RA
Sbjct: 472 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 531
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ E M RGF VST +++V L
Sbjct: 532 QLLEEMLARGFSADVSTTTLLVEML 556
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 34/263 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ +L P I+ LL ++ K + + +M S G P+ ++ +I
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N + F VL + + P+ T+ +IR LC K+ EA L D+MI+ G
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N PD Y ++ L + + A
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G P + TY+ +VH LC
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276
Query: 267 -KKGKLEEACKYFEMMVDEGIPP 288
K+GK+ EA + +MM+ G+ P
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEP 299
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 5/233 (2%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P + N+ +D+A + + P ++ + + +
Sbjct: 12 MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 71
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+V + M + + PNV+T N +I C +V A+ +L ++++ G PD ++
Sbjct: 72 YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 131
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E P+ TY ++ L +VG A + SME+
Sbjct: 132 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 191
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
P V Y+ ++ LCK + ++ EA F MV +GI P Y+S V L N
Sbjct: 192 CQPDVVIYTSIIDSLCKDR-QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ PS++ + ++H LCKR + A++ F + ++ +P TY+ + RG E A
Sbjct: 471 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+L +EML R D+ L+E + G +D++ L M S+ +E D Y IFI
Sbjct: 531 IQLLEEMLARGFSADVSTTTLLVEMLSDDG-LDQSSCFL--MLSVLSEDDR-RYFIFI 584
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV GIKP + + +L L + A + F P V+++++L+ G GE
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + + EM R+ D+++ + L+ + G +D A LREMR G PD Y++
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + RV D M + +P+V TYN ++ LCK ++ +A +LL+EM ERG
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ +C + AL+ ++ + + PD TYN ++ + R G +A
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+W+ M R +P+ TYS+++ C +KG+++ A + + MV++GI P
Sbjct: 460 ELWDDMHSREIFPNHVTYSILIDSHC-EKGQVDNAFAFLDEMVNKGIVP 507
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV FG P + + LL+ LCK + + A + + K P + T++ L+ G G
Sbjct: 360 MVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGN 419
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + FD + +++ DI+ +N+L++ MC+ G++ +A+ + +M S P+ +YSI
Sbjct: 420 IEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSI 479
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE + + F LD M +VPN+ TYN II+ C++ V + Q L +M
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ + +++ A L+ M ENV PD TYNM++ G A
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V++ M RG P TY M++G G +++ + + M+ +G+ P
Sbjct: 600 WVYKKMGARGIEPDRYTYMSMINGHV-VAGNSKKSFQLHDEMLQKGLAP 647
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 146/292 (50%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEAR 64
+ P + L+ +R + A ++ + P Y++++ G G + EA
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEAL 354
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ DEM+ C D++ +N+LL +CK + +A +L EM+ G PD +++ IH +
Sbjct: 355 RVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGY 414
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C +I + D++ L P++ TYN +I +C+ + +A +L D+M R P+
Sbjct: 415 CRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNH 474
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ ++ HC++ +V+ A + M + ++P+ TYN ++K R G + +
Sbjct: 475 VTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M P + TY+ ++HG K+GK+ EA ++M +E + P + T M+
Sbjct: 535 MRHDKVMPDLITYNTLIHGYV-KEGKMHEAFNLLKIMENENVQPDAVTYNMI 585
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 9 SIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+ Y L+ ++H+ CK + +V + K P V T++++V G++ A L
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
D M+ + ++ +NS+L+ + + G D+A + R M + G PD S+++ I FC A
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
++ R M+ + P+V +++C+I + +++ A + L EM E G PD Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C + ALR+ M +PD TYN +L L + R A E+ M++
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RG P + T++ ++HG C + G +E+A ++F+ + D+ + P T L + + G L
Sbjct: 398 RGVPPDLCTFTTLIHGYC-RDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456
Query: 308 IIEILADKM 316
L D M
Sbjct: 457 KANELWDDM 465
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P I + L+ +C++ + A++ +D+ E P TYSIL+ + G++ A
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
DEM+ + +I+ +NS+++ C++GN+ + L +MR PD +Y+ IH +
Sbjct: 495 AFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGY 554
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ +H F +L M+ N+ P+ TYN II + ++EA + +M RG PD
Sbjct: 555 VKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDR 614
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++Y +++ H + +L M ++ + PD
Sbjct: 615 YTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 5/262 (1%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
+L V+ N ++ + CK E ++ EM PD ++++ + A A D
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ + ++DSM + P + TYN +++ L +N + ++A ++ M G PD S+N
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM 269
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C E+ ALR M V PD +++ ++ L R G D A E M + G
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DI 308
P Y++++ G C + G + EA + + MV G P T L N L L D
Sbjct: 330 LMPDGVIYTMVIGGFC-RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388
Query: 309 IEILADKMERSTS---CTIQEL 327
E+L + ER CT L
Sbjct: 389 EELLNEMKERGVPPDLCTFTTL 410
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + +L+R + EA + F +L+ + P+ A N+LL A+ +AG
Sbjct: 86 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTAD 145
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
R + S +E + ++ +I +H++C+ V V+ M++ + P+V T+N ++
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARF 205
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ VE A L+D M+ +G P +YN++L + A + M V PD
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++NM++ R G + A ++ M R P V ++S ++ GL ++G+++ A +Y
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI-GLFTRRGEMDHAAEYLRE 324
Query: 281 MVDEGIPP 288
M + G+ P
Sbjct: 325 MREFGLMP 332
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 71/223 (31%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ----LLDEMIE-------------- 177
++ S+ + P ++ +IR ++ K EA++ LLD +
Sbjct: 76 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALS 135
Query: 178 RGANP-----------------DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD-- 218
R P + ++ N ++ +C + +I+ M K V PD
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 219 RH---------------------------------TYNMVLKLLVRVGRFDRATEVWESM 245
H TYN VLK L+R GR+D+A EV+ +M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ G P V ++++++ G C + G+LEEA ++++ M + P
Sbjct: 256 DACGVAPDVRSFNMLIGGFC-RAGELEEALRFYKEMRGRRVTP 297
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 157/286 (54%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 264 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 323
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M+++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 324 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 383
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 384 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 443
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ A R+ +M + + P HT+NM++K ++ +
Sbjct: 444 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSA 503
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VW+ M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 504 VWDEMIKKGICPDDNSYTVLIRGLI-GEGKSREACRYLEEMLDKGM 548
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D +NS++ + K + +L EM + G +++I + AF A + +
Sbjct: 203 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIF 261
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ MK+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C
Sbjct: 262 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 320
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A R+ M + + PD +N++L+ L+R + A +++ M+ +G P+V +Y
Sbjct: 321 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 380
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++M+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 381 TIMIRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 423
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 372 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 431
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + A + +M EP ++++ + +
Sbjct: 432 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 491
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V D M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 492 YFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 551
Query: 184 EWSYNAILA 192
YN A
Sbjct: 552 LIDYNKFAA 560
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ +D K P +Y++L+RGL G+
Sbjct: 473 MIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGK 532
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N K G
Sbjct: 533 SREACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQ 567
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ P+I + L LCK+ A + + +P T+S L+ GL G+ E
Sbjct: 184 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A D+M+ +++ +N+L+ +CKA ++ AH M+ M G PD +YS+ +
Sbjct: 244 ACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 301
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
AFC+A+ + +L M PNV T+N II LCK+++ EA+Q+ ++ R P
Sbjct: 302 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVP 361
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D+ ++N ++A C A L M +N+ PD T+ ++ L + G+ + A ++
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL 421
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M G P+V TY+V+VHGLC K G++EE C++ E MV G P S T
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLC-KSGRIEEPCEFLEEMVSSGCVPESMT 470
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 78/379 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN------------------------- 35
M G+ P+I + +++ LCK + + F+
Sbjct: 72 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131
Query: 36 -----------AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV--DILAH 82
+ P V TYS+L+ GL VG + EAR+L EM + C V +I+ +
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191
Query: 83 NSLLEAMCKAGNIDEAHGMLREMR--SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
NS L+ +CK EA ++R +R S+ PD ++S I C+ D M
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDM 249
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
VPNV TYN ++ LCK +K+E A+ +++ M+++G PD +Y+ ++ C + V
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 309
Query: 201 NMALRLI----TRMTKENV-------------------------------MPDRHTYNMV 225
+ AL L+ +R NV +PD+ T+N++
Sbjct: 310 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + G F++A+ ++E M + P V T+ ++ GLC K G++E A ++M + G
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLC-KAGQVEAARDILDLMGNLG 428
Query: 286 IPPYSSTVEMLRNRLVGLG 304
+PP T +L + L G
Sbjct: 429 VPPNVVTYNVLVHGLCKSG 447
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + L+ A CK V A + A TP V T++ ++ GL
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++ ++ R D + N L+ CKAGN ++A + EM + +PD ++
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + + +LD M + PNV TYN ++ LCK+ ++EE + L+EM+ G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + + AL+L++++ PD TYN+++ L + G+ ++A
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
V E M +G P T++ GL + G L + +++ +G+ P ++T
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGL-HRSGNLAGTMELLRVVLAKGMLPDATT 575
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 170/383 (44%), Gaps = 77/383 (20%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
S+ D + +L +LC+ A + F + A+ PT+ TY+ ++ GL EL +L
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+E+++R D++ +N+L++++CKAG+++EA + M S G P+ +YS+ I+ C+
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 127 ANDIHSVFRVLDSMKR--YNLVPNVFTYNCIIRKLCKNEKVEEAYQLL------------ 172
I ++ M R +++PN+ TYN + LCK EA +L+
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 173 -----------------------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
D+MI G P+ +YNA++ C ++ A +I
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK--- 266
M + V PD TY++++ + R D A E+ M RG P+V T++ ++ GLCK
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 267 -------------------------------KKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
K G E+A FE MV + + P T
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Query: 296 LRNRLVGLGFL----DIIEILAD 314
L + L G + DI++++ +
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGN 426
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+ P L+ LCK A D + P V TY+ LV GL ++ A
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEACND-DMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ + M+++ D++ ++ L++A CKA +DEA +L M S G P+ +++ I C
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339
Query: 126 EANDIHSVFRVLDSMKRYN--LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+++ F++ +++ YN LVP+ T+N +I CK E+A L +EM+ + PD
Sbjct: 340 KSDRSGEAFQI--ALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPD 397
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ A++ C +V A ++ M V P+ TYN+++ L + GR + E E
Sbjct: 398 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLE 457
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M G P TY +V+ LC+ + ++A + + G P + T +L + L
Sbjct: 458 EMVSSGCVPESMTYGSLVYALCRAS-RTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 1/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G P++ + ++ LCK A Q + P T++IL+ G G
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF+EM+ + D++ +L++ +CKAG ++ A +L M ++G P+ +Y++
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C++ I L+ M VP TY ++ LC+ + ++A QL+ ++ G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN ++ + A+ ++ M + PD T+ L R G
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558
Query: 240 EVWESMEKRGFYPSVSTYS 258
E+ + +G P +T S
Sbjct: 559 ELLRVVLAKGMLPDATTCS 577
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV ++P + L+ LCK V+ A D P V TY++LV GL G
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E + +EM+ C + + + SL+ A+C+A D+A ++ +++S G +PD +Y+I
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ ++ VL+ M P+ FT+ L ++ + +LL ++ +G
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568
Query: 180 ANPDEWSYNAIL 191
PD + ++IL
Sbjct: 569 MLPDATTCSSIL 580
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 3/310 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIK + L+ LC K A + P V T+S L+ G+L EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L++EM+ R D + +NSL++ CK + EA+ M M S G EPD +YSI I++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + R+ + L+PN TYN ++ C++ K+ A +L EM+ RG P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E+N AL + +M K + YN+++ + + D A ++
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RNRLVG 302
S+ +G P V TY+VM+ GLC KKG L EA F M ++G P T +L R L G
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLC-KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 303 LGFLDIIEIL 312
G + +E++
Sbjct: 574 SGLISSVELI 583
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MVE+G +P +L+ LCK + +A F + +V YSI++ L G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF+EM + D++ ++SL+ +C G D+ MLREM PD ++S
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + + + M + P+ TYN +I CK + EA Q+ D M+ +G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ +C V+ +RL ++ + ++P+ TYN ++ + G+ + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+++ M RG PSV TY +++ GLC G+L +A + FE M
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLC-DNGELNKALEIFEKM 481
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 3/324 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E IK S+ ++ +LCK A F+ + + V TYS L+ GL + G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ K+ EM+ R D++ ++L++ K G + EA + EM + G PD +Y+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N +H ++ D M P++ TY+ +I CK ++V++ +L E+ +G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C ++N A L M V P TY ++L L G ++A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E M+K + Y++++HG+C K+++A F + D+G+ P T ++
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNAS-KVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 300 LVGLGFLDIIEILADKMERSTSCT 323
L G L ++L KM + CT
Sbjct: 535 LCKKGSLSEADMLFRKM-KEDGCT 557
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE +P + + L++ LC + V A D ++ F P TY ++ L G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF +M ER ++ ++ +++++CK G+ D+A + EM G + D +YS
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M N++P+V T++ +I K K+ EA +L +EMI RG
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+++ C ++ A ++ M + PD TY++++ + R D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + +G P+ TY+ +V G C+ GKL A + F+ MV G+PP T +L +
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQS-GKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + +KM++S
Sbjct: 465 LCDNGELNKALEIFEKMQKS 484
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ +Y + +++ C++K + A A K + P T+S LV G G +SEA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E K D++ ++L+ +C G + EA ++ M G +PD +Y ++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + + M+ N+ +V Y+ +I LCK+ ++A L +EM +G D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C+ + + +++ M N++PD T++ ++ + V+ G+ A E++
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TY+ ++ G CK+ L EA + F++MV +G P T +L N
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILIN 393
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + L+ CK + A+Q FD P + TYSIL+
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF E+ + + + +N+L+ C++G ++ A + +EM S G P +Y I
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ +++ + + M++ + + YN II +C KV++A+ L + ++G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ PD TYN++++ + +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E+ E M+ GF ST +++ L ++
Sbjct: 581 ELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 12/256 (4%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERK---CPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
L G+ D+ ++++A LF+ M++ + P+D N L A+ + D G + M
Sbjct: 42 LRNGIVDI-KVNDAIDLFESMIQSRPLPTPID---FNRLCSAVARTKQYDLVLGFCKGME 97
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G E D ++ +I I+ +C + F VL + P+ T++ ++ C +V
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA L+D M+E PD + + ++ C + V+ AL LI RM + PD TY VL
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L + G A +++ ME+R SV YS+++ LC K G ++A F M +GI
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC-KDGSFDDALSLFNEMEMKGI 276
Query: 287 PP----YSSTVEMLRN 298
YSS + L N
Sbjct: 277 KADVVTYSSLIGGLCN 292
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
KV +A L + MI+ P +N + + + ++ L M + D +T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R + A V K G+ P T+S +V+G C + G++ EA + MV+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE-GRVSEAVALVDRMVE 168
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P TV L N L G + +L D+M
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G++P + L++ LCK A +FFD+ + PTV TY+ ++ GL +GE
Sbjct: 156 MIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF +M E C +++ +N L++++CK ++EA + M++ PD F+Y+
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +L+ M N++PN+FT+N ++ +CK KV EA + M E G
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ + R E+ A +L M + PD +YN+++K + R D A
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAK 395
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G P Y+ ++HGLC + G+L EA F+ M G P T ML +
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLC-QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454
Query: 300 LVGLGFL 306
G+L
Sbjct: 455 FCKEGYL 461
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 157/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G +P++ + L+ +LCK K V A F K + +P + TY+ L++GL +
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM +I N L++A+CK G + EA G+ + M +G EPD +YS
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + +I ++ D+M P+ F+YN +I+ CK ++++EA QL +EMI +G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + A L M +PD TY+M+L + G +A
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M+ P ++ Y++++ +C K G L++A K F + +G+ P + N
Sbjct: 466 RLFRVMQSTYLKPDIAMYNILIDAMC-KFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 525 LCKEGLLD 532
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M I P+I+ + L+ A+CK V A F + P V TYS L+ G E
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD M+ + C D ++N L++ CKA IDEA + EM G PD +Y+
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + + +M +P++FTY+ ++ CK + +A++L M
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN ++ C + A +L + + + ++P+ Y ++ L + G D A
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL 535
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
E + +ME G P +Y+V++ G + K + A + M D G + T
Sbjct: 536 EAFRNMEGDGCPPDEFSYNVIIRGFLQYKDE-SRAAQLIGEMRDRGFVAEAGTT 588
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 144/294 (48%), Gaps = 9/294 (3%)
Query: 8 PSIYDLDQLLHALCKRKH-----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
P I +LL A+ K + ++ Q +P + T SIL+ + +
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQM---ELAGLSPDIYTLSILIDCFSHLQRVDL 148
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +F +M++ D + N+L+ +CK G +A + + G +P ++Y+ I+
Sbjct: 149 AFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + + M+ PNV TYN +I LCK++ V EA + M + +P
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++YN+++ C+ A L+ MT N+MP+ T+N+++ + + G+ A V+
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++M + G P V TYS +++G + ++ EA K F+ M+ +G P + + +L
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRM-EIVEARKLFDAMITKGCKPDAFSYNIL 381
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 2/238 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH-GMLREMRSIGAEPDAFSYS 118
+ +A F+ ML R+ I+ LL A+ K G A + ++M G PD ++ S
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I F + F V M + L P+ T+N +I LCK K +A + D+
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P ++Y I+ C E A L +M + P+ TYN+++ L + + A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M+ + P + TY+ ++ GLC + + +EA M I P T +L
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFR-RWKEASALLNEMTSLNIMPNIFTFNVL 311
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA-LRLITRMTKENVMPDRHTYN 223
+++A + M+ R P + +L+ + A + L +M + PD +T +
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ + R D A V+ M K G P T++ +++GLCK GK +A ++F+
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKV-GKFAQAVEFFDDFEA 193
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
G P T + N L +G L KME +
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA 229
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 5 GIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P+I + LL+ LCK + + + + DN TP V TY+ L+ GLG
Sbjct: 64 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVVTYTSLIDGLGKKKRS 120
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA KLF EM R +D + + +L+ + +AG I +A + + M S G PD + S
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+A I + R+ SM+ L PN Y+ +I LCK K++ A ++L +M +
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ C +V A M + PD +TYN+++ + G D A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
V++ M P+V TY ++ GLCK++ +L +A Y++ M + G PP S L + L
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRR-QLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359
Query: 301 VGLGFLDIIEILADKMERS 319
G L+ +L D+MERS
Sbjct: 360 CKSGKLEGGCMLFDEMERS 378
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+H LCK + + A + K F TP TY+IL+ GL G+++ A
Sbjct: 204 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAA 263
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R FDEMLE C D+ +N L+ CKAGN D A G+ +M S P+ +Y I
Sbjct: 264 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISG 323
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + MK P+ F Y+ ++ LCK+ K+E L DEM ER +
Sbjct: 324 LCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM-ERSGVAN 382
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ ++ + C V+ A+ L + KE MP + YN ++ L++ G+ + V++
Sbjct: 383 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQ 441
Query: 244 SM 245
M
Sbjct: 442 EM 443
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 1/271 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
T+SIL+ GL G L +A L E C +DI + ++++ + K I EA ++ ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G P +Y+ ++ C+ + +L + P+V TY +I L K ++
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EAY+L EM RG D Y A++ ++ A + MT + +PD T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + GR A +++SME RG P+ YS ++HGLCK + K++ A + M
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAF 239
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P + T +L + L G + D+M
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEM 270
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 39/327 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G P + L+ L K+K A++ F + A Y+ L+RGL G+
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGK 154
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
+ +A ++ M + C D++ +++++ +CKAG I A
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214
Query: 99 --HG------------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
HG ML +M+ PD +Y+I I C++ D+ + D M
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+V+TYN +I CK + A + D+M +P+ +Y +++ C R ++ A
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + PD Y+ ++ L + G+ + +++ ME+ G S + ++ H L
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-L 393
Query: 265 CKKKGKLEEACKYFEMMVDEGIP-PYS 290
CK +++EA F + EG+P PY+
Sbjct: 394 CKAN-RVDEAVSLFNAIRKEGMPHPYA 419
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 2/305 (0%)
Query: 16 LLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ L K + AH + + T + TY+ +V L ++ EA L +++
Sbjct: 5 LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C I +N+LL +CK G ++EA +LR++ G PD +Y+ I + +
Sbjct: 65 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ M L + Y +IR L + K+ +A + M +G PD + + ++
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A+R+ M + P+ Y+ ++ L + + D A E+ M+K P
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
TY++++ GLC K G + A +F+ M++ G P T +L + G D + D
Sbjct: 245 ITYNILIDGLC-KSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 303
Query: 315 KMERS 319
M S
Sbjct: 304 DMSSS 308
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G KP +Y + L+ CK + A FD+ + +P V TY L+ GL +
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQ 329
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A + M ER CP D ++SL++ +CK+G ++ + EM G +
Sbjct: 330 LTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRL 389
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
H C+AN + + +++++ + P+ + YN II L K+ KV E + EM
Sbjct: 390 IFH-LCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KPS++ + +++ LCK+ ++ + + +P TY+ L+
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA+++F EML + D+++ +SL+ + ++D+A R+M+ G PD Y++
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C ++ ++ D M V +V YN I+ LCK + + +A +L DEM+ERG
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A PD +++ ++ HC + AL L MT+ N+ PD YN ++ +VG ++A+
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+W+ M R +P+ TY ++++ C G + EA + +++M+++GI P
Sbjct: 419 ELWDGMISRKIFPNHITYGILINAYC-SVGHVSEAFRLWDVMIEKGIKP 466
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 37/334 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L+ + +H+ A +F D K P Y++L+ G G
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+ DEMLE+ C +D++A+N++L +CK + +A + EM GA PD ++++
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ ++ + +M + N+ P++ YN +I CK ++E+A +L D MI R
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRL--------------------------------- 206
P+ +Y ++ +C V+ A RL
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488
Query: 207 --ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ RM + V PD +YN ++ VR D+A MEK G P + TY+V+++G
Sbjct: 489 EFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGF 548
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
C++ G+++EA M+++GI P ST L N
Sbjct: 549 CRQ-GRMQEAELVLRKMIEKGINPDRSTYTALIN 581
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G + + +L+ LCK K + A + FD + P T++ L+ G G
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF M +R DI+A+N+L++ CK G +++A + M S P+ +Y I
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+A+C + FR+ D M + P + T N +I+ C++ +A + L MI +G
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ ++ A I +M KE ++PD TYN+V+ R GR A
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V M ++G P STY+ +++G + L EA ++ + M+ G P
Sbjct: 559 LVLRKMIEKGINPDRSTYTALINGHVTQD-NLNEAFRFHDEMLQRGFAP 606
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + IKP I + L+ CK ++ A + +D + P TY IL+ VG
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +L+D M+E+ ++ N++++ C++G+ +A L M + G PD SY+
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F +++ F ++ M++ L+P++ TYN ++ C+ +++EA +L +MIE+G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
NPD +Y A++ H + +N A R M + PD
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 125/246 (50%), Gaps = 1/246 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ ++ + L+ GL + + A ++ E++ +++ N ++ A+CK G D+
Sbjct: 79 YLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVK 138
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
L EM G D +Y+ I A+C + F +++SM L P++FTYN II L
Sbjct: 139 SFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGL 198
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK + A +L EM+ G +PD +YN +L C R + A + M ++ V+PD
Sbjct: 199 CKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDL 258
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+++ ++ + R D+A + M+K G P Y+V++HG C + G + EA K +
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC-RNGNMLEALKIRD 317
Query: 280 MMVDEG 285
M+++G
Sbjct: 318 EMLEQG 323
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+V GI+ ++Y L+ +++ALCK F + + + TY+ L+ G
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ + M ++ + +N+++ +CK G A G+L EM +IG PD +Y+
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C ++ + M R +VP++ +++ +I +N +++A +M + G
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ +C + AL++ M ++ + D YN +L L + A
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++ M +RG P T++ ++HG C + G + +A F M I P
Sbjct: 349 KLFDEMVERGALPDFYTFTTLIHGHC-QDGNMTKALSLFGTMTQRNIKP 396
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G SI + LL L K V++A + + + V T +I+V L G+ +
Sbjct: 78 GYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDV 137
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM D++ +N+L+ A C+ G ++EA ++ M G +P F+Y+ I+
Sbjct: 138 KSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIING 197
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ +L M L P+ TYN ++ + C+ + EA ++ EM+ +G PD
Sbjct: 198 LCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPD 257
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
S+++++A ++ AL M K ++PD Y +++ R G A ++ +
Sbjct: 258 LVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRD 317
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++G V Y+ +++GLCK+K L +A K F+ MV+ G P
Sbjct: 318 EMLEQGCVLDVIAYNTILNGLCKEK-MLTDADKLFDEMVERGALP 361
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ +L+R +L E + F + + V I A NSLL + K ++ A + RE+
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G E + ++ +I ++A C+ V L M+ + ++ TYN +I C+ +
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EEA+++++ M ++G P ++YNAI+ C + A ++ M + PD TYN +
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L R F A E++ M ++G P + ++S ++ + + L++A YF M G
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR-HLDQALVYFRDMKKFG 288
Query: 286 IPP 288
+ P
Sbjct: 289 LVP 291
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 164/344 (47%), Gaps = 37/344 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P + + +L A C+ + A F K +PT TY IL+ GL + EA +L
Sbjct: 57 PDVITHNTILKAYCQIGDLDRALSHF-RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLL 115
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
DEM+++ C D +N L+ +CK G ID A +L+ M PD +Y+ I C+
Sbjct: 116 DEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT 175
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
N + ++++ MK L P+ YN ++ LCK ++EE +LL+EM+E G PD +SY
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT-------- 239
N ++A C+ + A +++ +M ++ PD TYN ++ +V + D A
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295
Query: 240 ---------------------------EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
V E M K G P + TY+ ++ GLC K GKLE
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC-KAGKLE 354
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
EA + E+MV++ P T +L N L LG +D +L + M
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 177/356 (49%), Gaps = 46/356 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+H LC+ + + A+Q D + + P Y+ L+ GL +G++ AR +
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
MLER C D++ + SL+ C+ +DEA ++ +M+ G PD +Y+ ++ C+
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N + V ++L+ M P+ F+YN ++ LC++ K EEA ++L++MIE+ PD +
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269
Query: 187 YNAILAYHCDRAEVNMALRLITRMT----------------------------------- 211
YN+++ C ++++ A RL+ M
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + PD TYN +L L + G+ + A E+ E M ++ P V TYS++V+GLC K GK+
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC-KLGKV 388
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADKMERSTSCT 323
++A EMM++ G P T + + G +D ++E++ + SCT
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM-----KEVSCT 439
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 161/320 (50%), Gaps = 29/320 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + LL+ LCK+ ++ + + + P +Y+ +V L + G+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K+ ++M+E+KC D++ +NSL++ CK +DEA +L +M P +Y+
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F A+ + +RV++ M + + P++ TYNC++ LCK K+EEA++LL+ M+E+
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C +V+ A L+ M + P+ T+N ++ + G+ D
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK----------------------------KKGKL 271
+V E M++ P V TYS ++ G CK GK+
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKV 487
Query: 272 EEACKYFEMMVDEGIPPYSS 291
EEA + ++M +G PP SS
Sbjct: 488 EEAQEVMDLMTKQGCPPTSS 507
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 158/322 (49%), Gaps = 31/322 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M + GI P + + LL LCK ++ AH+ + + + P V TYSILV GL +G+
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI----------- 108
+ +AR L + MLER C +++ N++++ CKAG +DE H +L M+ +
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 109 ------------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
G PD SYS + C + V+D M + P
Sbjct: 448 LIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
Y II LC E+ +EA ++L M ERG P+ ++Y+ ++ C V A+ ++ M
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
++ +PD TY ++ ++ + D A + +++M G P Y++++ G C + G
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC-QSGN 626
Query: 271 LEEACKYFEMMVDEGIPPYSST 292
+E+A + ++M+++G P ++T
Sbjct: 627 VEKAIEVMQLMLEKGCNPDAAT 648
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 7/287 (2%)
Query: 30 HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
+F D +K P+ TY L+ G G ++ +EML R+ D++ HN++L+A
Sbjct: 14 ERFSDPSK----PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
C+ G++D A R + P AF+Y I IH C+ I +++LD M + + P+
Sbjct: 70 CQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
YNC+I LCK K++ A +L M+ER PD +Y +++ C ++ A +L+ +
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + + PD YN +L L + + + +++ E M + G P +Y+ +V LC + G
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC-ESG 246
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K EEA K E M+++ P T L + + +D E L + M
Sbjct: 247 KYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM 293
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 30/260 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILV-------- 51
M+E G +P++ + ++ CK V H+ + K TP V TYS L+
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457
Query: 52 ---------------------RGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMC 90
GL G++ EA+++ D M ++ CP + ++ +C
Sbjct: 458 MQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517
Query: 91 KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
DEA ML+ M G EP+ ++YSI I+ C+ + VLD M VP+V
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVA 577
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY +I CK K++ AYQ M + G PD+ +YN +++ C V A+ ++ M
Sbjct: 578 TYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM 637
Query: 211 TKENVMPDRHTYNMVLKLLV 230
++ PD TY +++ L
Sbjct: 638 LEKGCNPDAATYFSLMRSLT 657
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 38/237 (16%)
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
E + RE S ++P +Y I F A + V + + M P+V T+N I+
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 157 RK---------------------------------LCKNEKVEEAYQLLDEMIERGANPD 183
+ LC+ ++++EAYQLLDEMI++ +PD
Sbjct: 67 KAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPD 126
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN ++A C +++ A ++ M + + +PD TY ++ + D A ++ E
Sbjct: 127 AAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLME 186
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M++ G P Y+ +++GLCK+ +LEE K E MV+ G P Y++ V L
Sbjct: 187 KMKESGLTPDTVAYNALLNGLCKQN-QLEEVSKLLEEMVEAGREPDTFSYNTVVACL 242
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
E Y E + P +Y A++ M L + M PD T+N +L
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K ++G DRA + K P+ TY +++HGLC+ + +++EA + + M+ +
Sbjct: 67 KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQ-RIDEAYQLLDEMIQKDC 123
Query: 287 PPYSSTVEMLRNRLVGLGFLDII-EILADKMERS 319
P ++ L L +G +D +L +ERS
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 159/289 (55%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KPS++ + +++ LCK+ ++ + + +P TY+ L+
Sbjct: 27 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 86
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA+++F EML + D+++ +SL+ + ++D+A R+M+ G PD Y++
Sbjct: 87 FSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 146
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C ++ ++ D M V +V YN I+ LCK + + +A +L DEM+ERG
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A PD +++ ++ HC + AL L MT+ N+ PD YN ++ +VG ++A+
Sbjct: 207 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 266
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+W+ M R +P+ TY ++++ C G + EA + +++M+++GI P
Sbjct: 267 ELWDGMISRKIFPNHITYGILINAYC-SVGHVSEAFRLWDVMIEKGIKP 314
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L+ + +H+ A +F D K P Y++L+ G G
Sbjct: 97 MLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 156
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+ DEMLE+ C +D++A+N++L +CK + +A + EM GA PD ++++
Sbjct: 157 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 216
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ ++ + +M + N+ P++ YN +I CK ++E+A +L D MI R
Sbjct: 217 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 276
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ +C V+ A RL M ++ + P T N V+K R G +A
Sbjct: 277 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 336
Query: 240 EVWESMEKRGFYPSVSTYSVMVH 262
E M +G P +Y+ +++
Sbjct: 337 EFLGRMIAKGVAPDHISYNTLIN 359
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L+ G L EA ++ + M ++ + +N+++ +CK G A G+L EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+IG PD +Y+ + C ++ + M R +VP++ +++ ++ +N +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++A +M + G PD Y ++ +C + AL++ M ++ + D YN +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L L + A ++++ M +RG P T++ ++HG C + G + +A F M
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHC-QDGNMTKALSLFGTMTQRN 241
Query: 286 IPP 288
I P
Sbjct: 242 IKP 244
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++ +N+L+ A C+ G ++EA ++ M G +P F+Y+ I+ C+ +L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M L P+ TYN ++ + C+ + EA ++ EM+ +G PD S+++++A
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++ AL M K ++PD Y +++ R G A ++ + M ++G V Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++GLCK+K L +A K F+ MV+ G P
Sbjct: 181 TILNGLCKEK-MLTDADKLFDEMVERGALP 209
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+KP ++ + ++ +CK V A + N + + P V +Y+IL+R L + G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KL +M KC +++ ++ L+ +C+ G I+EA +L+ M+ G PDA+SY
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC + L++M +P++ YN ++ LCKN K ++A ++ ++ E G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ SYN + + + AL +I M + PD TYN ++ L R G D A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M F+PSV TY++++ G CK ++E+A E MV G P +T +L
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAH-RIEDAINVLESMVGNGCRPNETTYTVL--- 549
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 550 IEGIGF 555
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 3/309 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + ++ +LC R + +A + + PTV TY+IL+ G + EA KL
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEML R D+ +N+++ MCK G +D A M+R + G EPD SY+I + A
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ M PNV TY+ +I LC++ K+EEA LL M E+G PD +S
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++A C +++A+ + M + +PD YN VL L + G+ D+A E++ +
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G P+ S+Y+ M L K+ EMM + GI P T + + L G +
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMV 489
Query: 307 D-IIEILAD 314
D E+L D
Sbjct: 490 DEAFELLVD 498
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 157/303 (51%), Gaps = 3/303 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELS 61
+FG +P ++ + L++ CK + A + D + +F+P TY+I++ L G+L
Sbjct: 152 KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K+ +++L C ++ + L+EA G +DEA ++ EM S G +PD F+Y+ I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + F ++ +++ P+V +YN ++R L K EE +L+ +M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y+ ++ C ++ A+ L+ M ++ + PD ++Y+ ++ R GR D A E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
E+M G P + Y+ ++ LC K GK ++A + F + + G P SS+ + + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 302 GLG 304
G
Sbjct: 450 SSG 452
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G P + +L+ +++ A + + + P V Y+ L+ G + +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRI 174
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A ++ D M + D + +N ++ ++C G +D A +L ++ S +P +Y+I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A + +++D M L P++FTYN IIR +CK V+ A++++ + +G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD SYN +L ++ + +L+T+M E P+ TY++++ L R G+ + A
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M+++G P +Y ++ C ++G+L+ A ++ E M+ +G P
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVAIEFLETMISDGCLP 401
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 71/293 (24%)
Query: 90 CKAGNIDEAHGMLREMRSIG----------------------------------AEPDAF 115
C++GN E+ +L M G +PD F
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK----------- 164
+Y+ I+ FC+ N I RVLD M+ + P+ TYN +I LC K
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 165 ------------------------VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
V+EA +L+DEM+ RG PD ++YN I+ C V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A ++ + + PD +YN++L+ L+ G+++ ++ M P+V TYS++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEIL 312
+ LC + GK+EEA ++M ++G+ P + + + L G LD+ IE L
Sbjct: 340 ITTLC-RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
I + C++ E+ LL+ M+ +G NPD ++ + A+R++ + K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD YN ++ ++ R D AT V + M + F P TY++M+ LC +GKL+ A
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC-SRGKLDLA 212
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K ++ + P T +L + G +D L D+M
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + ++ LC+ V A + D EF P+V TY+I++ G
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + + M+ C + + L+E + AG EA + ++ I DA S
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI----DAISEYS 579
Query: 120 FIHAFCEANDIHSVFRVLDSMKR 142
F +H F +L+ ++R
Sbjct: 580 F-------KRLHRTFPLLNVLQR 595
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 13/298 (4%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL LCK K+ KVA + F+ K+++ P K Y+IL+ G V ARK +ML+
Sbjct: 196 LLDTLCKYKYPKVATEIFNKRKYKYNPNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGI 255
Query: 76 PVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+I+ +N LL +C+ + + A +L+EMR G EPD SYSI +H +
Sbjct: 256 EPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEMRDRGIEPDVTSYSIILHVYS 315
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A+ + SMK + P V TY +I+ L ++E+A LLDEM+ G P
Sbjct: 316 RAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPA 375
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVM--PDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN + R +V+ AL+L +M + + PD HTYN++L + +++ R ++W
Sbjct: 376 TYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWS 435
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M + P + +Y++++HG C + K EAC++F M+++G P T E L L+
Sbjct: 436 DMCESTVGPDLDSYTLLIHGFCASQ-KWREACQFFMEMIEKGFLPQKITFETLYRGLI 492
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 21/263 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE------------FTPTVKTYS 48
M++ GI+P+I + LL+ +C+ + ++F D H P V +YS
Sbjct: 250 MLDHGIEPNIVTYNILLNGICRHASLHPDYRF-DRTVHSAEDVLKEMRDRGIEPDVTSYS 308
Query: 49 ILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
I++ + +F M +R CP + + S+++ + G +++A +L EM +
Sbjct: 309 IILHVYSRAHKPELCVCMFRSMKDRGICPT-VATYTSVIKCLASCGRLEDAETLLDEMVA 367
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN--LVPNVFTYNCIIRKLCKNEKV 165
G P +Y+ F + ND+ ++ + MK+ P++ TYN ++ K +
Sbjct: 368 EGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRH 427
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ +M E PD SY ++ C + A + M ++ +P + T+ +
Sbjct: 428 GSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFLPQKITFETL 487
Query: 226 LKLLVRVGRFDRATEVWESMEKR 248
+ L++ W +++R
Sbjct: 488 YRGLIQADML----RTWRRLKRR 506
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 16/275 (5%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A +L + + P D A++++++A+ +A D A ++ + + GA S++
Sbjct: 102 SLLHAARLHPSFVNTRPPPD--AYDAVVDALARARQFDAAWRVVVDASADGAA-SPRSFA 158
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + A R D M+ + N + ++ LCK + + A ++ ++ +
Sbjct: 159 VLARRYVAAGMTRQAVRAFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKR-K 217
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG---- 233
NP+E Y ++ C +MA + + M + P+ TYN++L + R
Sbjct: 218 YKYNPNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHP 277
Query: 234 --RFDR----ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
RFDR A +V + M RG P V++YS+++H + + K E F M D GI
Sbjct: 278 DYRFDRTVHSAEDVLKEMRDRGIEPDVTSYSIILH-VYSRAHKPELCVCMFRSMKDRGIC 336
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
P +T + L G L+ E L D+M C
Sbjct: 337 PTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVC 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 82/218 (37%), Gaps = 38/218 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI+P + +LH + ++ F + K PTV TY+ +++ L G
Sbjct: 295 MRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGR 354
Query: 60 LSEARKLFDEML-ERKCPV---------------DILAHNSLLEAMCKAGNIDEA----- 98
L +A L DEM+ E CP D+ L M + G++
Sbjct: 355 LEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTY 414
Query: 99 ------------HGMLREMRSIGAE----PDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
HG ++++ S E PD SY++ IH FC + + M
Sbjct: 415 NILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIE 474
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+P T+ + R L + + + +L + E A
Sbjct: 475 KGFLPQKITFETLYRGLIQADMLRTWRRLKRRVDEEAA 512
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+KP ++ + ++ +CK V A + N + + P V +Y+IL+R L + G+
Sbjct: 250 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGK 309
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KL +M KC +++ ++ L+ +C+ G I+EA +L+ M+ G PDA+SY
Sbjct: 310 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 369
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC + L++M +P++ YN ++ LCKN K ++A ++ ++ E G
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ SYN + + + AL +I M + PD TYN ++ L R G D+A
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M F+PSV TY++++ G CK ++E+A + MV G P +T +L
Sbjct: 490 ELLVDMRSCEFHPSVVTYNIVLLGFCKAH-RIEDAIDVLDSMVGNGCRPNETTYTVL--- 545
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 546 IEGIGF 551
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 3/309 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + ++ +LC R + +A + D PTV TY+IL+ G + EA KL
Sbjct: 187 PDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 246
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEML R D+ +N+++ MCK G +D A M+R + G EPD SY+I + A
Sbjct: 247 LDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLN 306
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ M PNV TY+ +I LC++ K+EEA LL M E+G PD +S
Sbjct: 307 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 366
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++A C +++A+ + M + +PD YN VL L + G+ D+A E++ +
Sbjct: 367 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 426
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G P+ S+Y+ M L K+ E MV GI P T + + L G +
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILE-MVSNGIDPDEITYNSMISCLCREGMV 485
Query: 307 D-IIEILAD 314
D E+L D
Sbjct: 486 DKAFELLVD 494
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 157/303 (51%), Gaps = 3/303 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELS 61
+FG +P ++ + L++ CK + A + D + +F+P TY+I++ L G+L
Sbjct: 148 KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 206
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K+ D++L C ++ + L+EA G +DEA +L EM S G +PD F+Y+ I
Sbjct: 207 LALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + F ++ +++ P+V +YN ++R L K EE +L+ +M +
Sbjct: 267 RGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 326
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y+ ++ C ++ A+ L+ M ++ + PD ++Y+ ++ R GR D A E
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
E+M G P + Y+ ++ LC K GK ++A + F + + G P SS+ + + L
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445
Query: 302 GLG 304
G
Sbjct: 446 SSG 448
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G P + +L+ ++V A + + + P V Y+ L+ G + +
Sbjct: 111 MVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRI 170
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A ++ D M + D + +N ++ ++C G +D A +L ++ S +P +Y+I
Sbjct: 171 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTIL 230
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A + ++LD M L P++FTYN IIR +CK V+ A++++ + +G
Sbjct: 231 IEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGC 290
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD SYN +L ++ + +L+T+M E P+ TY++++ L R G+ + A
Sbjct: 291 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 350
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M+++G P +Y ++ C ++G+L+ A ++ E M+ +G P
Sbjct: 351 LLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVAIEFLETMISDGCLP 397
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 71/293 (24%)
Query: 90 CKAGNIDEAHGMLREMRSIG----------------------------------AEPDAF 115
C++GN E+ +L M G +PD F
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK----------- 164
+Y+ I+ FC+ N I RVLD M+ + P+ TYN +I LC K
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 165 ------------------------VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
V+EA +LLDEM+ RG PD ++YN I+ C V
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A +I + + PD +YN++L+ L+ G+++ ++ M P+V TYS++
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEIL 312
+ LC + GK+EEA ++M ++G+ P + + + L G LD+ IE L
Sbjct: 336 ITTLC-RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
I + C++ E+ LL+ M+ +G NPD ++ V A+R++ + K
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD YN ++ ++ R D AT V + M + F P TY++M+ LC +GKL+ A
Sbjct: 151 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC-SRGKLDLA 208
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K + ++ + P T +L + G +D L D+M
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEM 250
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
E G P+ + + AL ++ H + + P TY+ ++ L G +
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVD 486
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A +L +M + ++ +N +L CKA I++A +L M G P+ +Y++ I
Sbjct: 487 KAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLV 146
A + + + R N +
Sbjct: 547 EGIGFAGYRAEAMELANDLVRINAI 571
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 158/301 (52%), Gaps = 5/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G P + L+ K K A +F + K+ PTV TY+ +V GL G
Sbjct: 36 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGR 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL DEM ++ C +I +N ++E +C+ +DEA ML EM G PD +Y+
Sbjct: 96 TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ + + + L R + P+V +Y +I LCK+ ++ A ++LD+M RG
Sbjct: 156 FIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ C EV A+ L+ M K P+ YN +L L R+G +A
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 272
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ ME+RGF P V +Y+ + GLCK + ++++A F+ MV+ G P +S+ ML
Sbjct: 273 DMLVEMERRGFTPDVVSYNACIDGLCKAE-RVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 300 L 300
L
Sbjct: 332 L 332
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 151/280 (53%), Gaps = 4/280 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + + LCK V A +F A+ TP V +Y+ ++ GL G+L A
Sbjct: 145 GYFPDVVTYNSFIKGLCKCDRVDEARKFL--ARMPVTPDVVSYTTVINGLCKSGDLDSAS 202
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D+M R C D++ ++SL++ CK G ++ A G+L M +G P+ +Y+ + A
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
I +L M+R P+V +YN I LCK E+V++A + D M+ERG P+
Sbjct: 263 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SY+ ++ C + E++ A+ L+ + ++ + D Y ++L L + GRFD A ++
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382
Query: 245 -MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++++ P V Y+VM+ CK++ ++++A + + M++
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRR-QIDKALQIHKQMLE 421
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 4/277 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P T++IL+RGL +L +AR+L M E C D +N+L+ KA + +A
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM P +Y+ + C+A ++LD M+ PN++TYN I+ LC+
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K++EA ++L+EM RG PD +YN+ + C V+ A + + RM V PD +
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVS 184
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y V+ L + G D A+ + + M RG P V TYS ++ G C K G++E A + M
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFC-KGGEVERAMGLLDSM 243
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ G P L L LG + E + +MER
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 280
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 151/333 (45%), Gaps = 39/333 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + +++ LCK + A + D + TP V TYS L+ G GE+ A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D ML+ C +++A+NSLL A+ + G+I +A ML EM G PD SY+ I
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA----------YQLLDE 174
C+A + V D M PN +Y+ ++ +LCK +++++A YQ++D
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357
Query: 175 MI--------------------------ERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
++ E+ PD + YN +L HC R +++ AL++
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M + N + T+N+++ L R A + +M GF P TY +V +C K
Sbjct: 418 QMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC-KC 475
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
GK A + FE V G P T L LV
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 8/229 (3%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M+++ C D LL +C++ +++A +L M+ +G PD Y+ I + +A D
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
F+ L M + + +P V TY I+ LCK + ++A +LLDEM ++G +P+ ++YN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
I+ C+ +++ A +++ M PD TYN +K L + R D A + M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
P V +Y+ +++GLC K G L+ A + + M + G P YSS ++
Sbjct: 178 VTPDVVSYTTVINGLC-KSGDLDSASRMLDQMTNRGCTPDVVTYSSLID 225
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P ++ + +L + CKR+ + A Q V T++ILV GL LS+A +
Sbjct: 390 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETM 449
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M++ D + + +L++AMCK G A + E G PD +YS I
Sbjct: 450 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 509
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N + + + +V +N +I +N + +L E+IE P+ +
Sbjct: 510 ENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNART 562
Query: 187 YNAILAYHCDRAE-VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+ ++ +AE + A L R K PD N ++ + + G + A ++ SM
Sbjct: 563 FGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
Query: 246 EK 247
++
Sbjct: 623 KQ 624
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 161/319 (50%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG+K + D + L+ L K K VK A + K + F P +KTY++L+ G G
Sbjct: 225 MSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEK 284
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L + ++ EM++ D++A+ L+ A CK+G DEA + EM + G P Y
Sbjct: 285 DLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYC 344
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ + + + K+ V T N ++ C+ K E A++++DEM E
Sbjct: 345 MLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMREC 404
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y+ IL Y + A + RM + P +TY M++ + GR D A
Sbjct: 405 KIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMA 464
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
VW+ M +RG P + +S +++GLC + +LEEAC YF+ M+D+GI P L+
Sbjct: 465 LNVWKQMGERGVLPCMHMFSALINGLCFEN-RLEEACVYFQEMLDKGIRPPGQLFSNLKE 523
Query: 299 RLVGLGFLDIIEILADKME 317
LV G + + + +A K++
Sbjct: 524 ALVEGGRISLAQEMASKLD 542
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 36/255 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI+P + L+ A CK A + F++ P+ Y +L+ GLG
Sbjct: 296 MIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEER 355
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI----------- 108
L EA K F++ + P+++ N+++ A C+A + A M+ EMR
Sbjct: 356 LDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDV 415
Query: 109 ------------------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
G EP +Y++ + FC + V M
Sbjct: 416 ILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERG 475
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++P + ++ +I LC ++EEA EM+++G P ++ + + +++A
Sbjct: 476 VLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQ 535
Query: 205 RLITRMTKENVMPDR 219
+ +++ P R
Sbjct: 536 EMASKLDAIRKTPFR 550
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 57/223 (25%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF------------TYNCIIRKLC 160
+ FSY+ A H++ L +K++ LV ++ T+ I+R+
Sbjct: 159 EGFSYT--------AEGFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKDTFKLIVRRYA 210
Query: 161 KNEKVEEAYQLLDEMIERGAN------------------------------------PDE 184
+ KV+EA + ++M G PD
Sbjct: 211 RARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDL 270
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ ++ M + M + PD Y M++ + G+ D A +V+
Sbjct: 271 KTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYE 330
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
ME G PS Y ++++GL ++ +L+EA KYFE G P
Sbjct: 331 MEASGCMPSPHVYCMLINGLGSEE-RLDEALKYFEQYKKSGFP 372
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 4/292 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+ LL++LCK K V A F ++ F P V +YSIL+ G + EL A KL+ +M+
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+ C ++ +N+ L + + G I +A G+ EM + G PD +YS IH F A
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ ++M PN TYNC++ LCK K +EA++L +M+ERG +PD +Y +L
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C+ ++ A+ + M + PD YN +LK R G+ A ++++ M R
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCK 689
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMM-VDEGIPPYSSTVEMLRNRLVG 302
P ++++M+ GL K K +L++A + FE M D G P T L L G
Sbjct: 690 PDTVSHNIMIDGLSKAK-RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 740
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 4/288 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L LCK ++ A + + + + Y +L+R L + G + +A + E+ R
Sbjct: 311 FLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNI 370
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+S+++ +CKAG +D A +L M G PD ++S+ I+ C+A+ I
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430
Query: 136 VLDSMKR--YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-ERGANPDEWSYNAILA 192
L M R + + F+YN ++ LCK +KV +A+ + M+ ER PD SY+ ++
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C E+ A +L +M N +P+ TYN L L+R GR A V+E M G P
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
V TYS ++HG + K ++A + FE M+ G P + T L + L
Sbjct: 551 DVITYSTLIHGFSLAR-KHDQAHELFETMISRGCRPNAVTYNCLLHGL 597
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ P++ + L+ L ++ + A ++ +P V TYS L+ G +
Sbjct: 508 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARK 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF+ M+ R C + + +N LL +CK DEAH + R+M G +PD +Y+
Sbjct: 568 HDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTT 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC I V D M P+V YNC+++ + K EA QL M+ R
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLKLLVRVGRFDRA 238
PD S+N ++ ++ A+ + RM +++ PD TYN ++ L R A
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL 264
+V++ +++ P ++V++ +
Sbjct: 748 MKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 135/283 (47%), Gaps = 4/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P+ + L+ + C ++ A +FF F P+ Y + L G+
Sbjct: 155 MVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGK 214
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E ++F LE++ V+++ +LL EA + R M G +PDA YS
Sbjct: 215 EGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSY 274
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVP-NVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ A C+ ++ F++ M + P N + + LCK+ K+E+A++ M E
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE- 333
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ + Y+ ++ + ++ A + N+ P T + V++ L + GR D A
Sbjct: 334 SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSA 393
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ E+M KRG+ P ++T+S++++ LCK K++EA ++ + M
Sbjct: 394 LSLLETMIKRGYCPDMATHSMLINELCKAD-KIQEAQEFLQGM 435
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EA R +++ + D F+Y+ + D+ +V + M +VPN FTY ++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ C +EA + EM+++G P Y + + R+ R ++ V
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ +L V + A++++ +M K G P + YS MV CK + L+EA K
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLE-NLDEAFK 290
Query: 277 YF-EMMVDEGIP 287
F EM V+ P
Sbjct: 291 LFLEMAVESKAP 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL + N D TYN +L L+R +A +V+E M +G P+ TY+V+V
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
C ++ +EA ++F MVD+G P S+ + + L G
Sbjct: 173 SSCYERNS-DEAVRFFGEMVDKGFKPSSTLYQKVTECLKATG 213
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G +P + LL LCK K+ KVA + F+ K+++ P K Y++L+ G V A+
Sbjct: 168 GREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVNRNDMAQ 227
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDA 114
K +M+ +I+ +N LL +C+ + + A +L+EM G EPD
Sbjct: 228 KFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPDV 287
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
SYS+ +H + A+ + SMK + P V TY +I+ L ++++A LLDE
Sbjct: 288 TSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDE 347
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN--VMPDRHTYNMVLKLLVRV 232
M G P +YN + R +VN AL+L +M PD HTYN++L + +++
Sbjct: 348 MASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKL 407
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ D +VW M + P +++Y+++VHGLC K K EAC++F M++ G P T
Sbjct: 408 NQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNK-KWREACQFFMEMIERGFLPQKIT 466
Query: 293 VEMLRNRLV 301
E L L+
Sbjct: 467 FETLYRGLI 475
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 115/262 (43%), Gaps = 19/262 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---------HE--FTPTVKTYSI 49
M+ GI+P+I + LL+ +C+ + ++F + H+ P V +YS+
Sbjct: 233 MIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPDVTSYSV 292
Query: 50 LVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
++ + +F M ER CP + + S+++ + G +D+A +L EM S
Sbjct: 293 ILHVYSRAHKPELCLCMFRSMKERGICPT-VATYTSVIKCLASCGRLDDAESLLDEMASE 351
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN--LVPNVFTYNCIIRKLCKNEKVE 166
G P +Y+ F + D++ ++ + MK P++ TYN ++ K + +
Sbjct: 352 GVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHD 411
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
Q+ ++M E PD SY ++ CD + A + M + +P + T+ +
Sbjct: 412 TVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLY 471
Query: 227 KLLVRVGRFDRATEVWESMEKR 248
+ L++ W ++KR
Sbjct: 472 RGLIQADML----RTWRRLKKR 489
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 75/218 (34%), Gaps = 38/218 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI+P + +LH + ++ F + K PTV TY+ +++ L G
Sbjct: 278 MHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGR 337
Query: 60 LSEARKLFDEML-ERKCP------------------------------------VDILAH 82
L +A L DEM E CP DI +
Sbjct: 338 LDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTY 397
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N LL K D + +M PD SY++ +H C+ + M
Sbjct: 398 NILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIE 457
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+P T+ + R L + + + +L + E A
Sbjct: 458 RGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEEAA 495
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG+K + D + L+ L K K VK AH F K F P +KTY++L+ G G
Sbjct: 239 MAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEK 298
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L + ++ EML+ D++A+ L+ + CK+G DEA + REM + G P Y
Sbjct: 299 DLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYC 358
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ + + + K V T N ++ C++ K + A++++DEM +
Sbjct: 359 MLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKS 418
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +Y+ IL + ++ A + M+K+ P +TY M++ + R D A
Sbjct: 419 GIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVA 478
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW M+++G P + +S +++GLC + +LEEAC YF+ M+D GI P L+
Sbjct: 479 LKVWNQMKEKGVLPCMHMFSALINGLCFEN-RLEEACAYFQEMLDRGIRPPGQLFSNLKE 537
Query: 299 RLVGLGFLDIIEILADKME 317
L+ G + + + +A K++
Sbjct: 538 ALIEGGRISLAQEMALKLD 556
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 102/255 (40%), Gaps = 36/255 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ + CK A + F + + P+ Y +L+ GLG
Sbjct: 310 MLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEER 369
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA K F+ P+++ N+++ A C++ A M+ EMR G P++ +Y I
Sbjct: 370 LDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDI 429
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV-------------- 165
+H ++ I + V M + P + TY ++ C NE+V
Sbjct: 430 ILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKG 489
Query: 166 ---------------------EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
EEA EM++RG P ++ + + +++A
Sbjct: 490 VLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQ 549
Query: 205 RLITRMTKENVMPDR 219
+ ++ + P R
Sbjct: 550 EMALKLDELRKTPMR 564
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 4/297 (1%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
S + + LL++LCK K V A F ++ P V +YSIL+ G + EL A KL
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL 179
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ +M++ C ++ +N+ L + + G I +A G+ EM S G PD +YS IH F
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A + ++M PN TYNC++ LCK K +EA++L +M+ERG +PD+ +
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +L C+ ++ A+ + M + PD YN +LK R G+ A ++++ M
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM-VDEGIPPYSSTVEMLRNRLVG 302
R P ++++M+ GL K K +L++A + FE M D G P T L L G
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAK-RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 415
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ P++ + L+ L ++ + A ++ +P V TYS L+ G +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF+ M+ R C + + +N LL +CK DEAH + R+M G +PD +Y+
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC I V D M P+V YNC+++ + K EA QL M+ R
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLKLLVRVGRFDRA 238
PD S+N ++ ++ A+ + RM +++ PD TYN ++ L R A
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL 264
+V++ +++ P ++V++ +
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
+S+++ +CKAG +D A +L M G PD ++S+ I+ C+A+ I L M R
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112
Query: 143 Y--NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-ERGANPDEWSYNAILAYHCDRAE 199
+ F+YN ++ LCK +KV +A+ + M+ ER PD SY+ ++ C E
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ A +L +M N +P+ TYN L L+R GR A V+E M G P V TYS
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++HG + K ++A + FE M+ G P + T L + L
Sbjct: 233 LIHGFSLAR-KHDQAHELFEAMISRGCRPNAVTYNCLLHGL 272
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 139/271 (51%), Gaps = 6/271 (2%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RS 107
+++ L G + A L + M++R CP D+ H+ L+ +CKA I EA L+ M R+
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCP-DMATHSMLINELCKADKIQEAQEFLQGMNRT 113
Query: 108 IGAEPDA-FSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKV 165
I + FSY+ +++ C+A +H F + +M ++VP+V +Y+ +I CK +++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
A +L +MI+ P+ +YNA L + + A + M PD TY+ +
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + D+A E++E+M RG P+ TY+ ++HGLCK+ K +EA + F MV+ G
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKES-KPDEAHELFRKMVERG 292
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P T L +G ++ + D+M
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM 323
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK--HEFTPTVKTYSILVRGLGDVG 58
MV KP + ++ L K K + A + F+ + H +P + TY+ L+ GL
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 417
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
LSEA K+F E+ K D A N LLEAM AG+
Sbjct: 418 RLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 5 GIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P+I + LL+ LCK + + + + DN TP V TY+ L+ GLG
Sbjct: 195 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVVTYTSLIDGLGKEKRS 251
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA KLF EM R +D + + +L+ + +AG I +A + + M S G PD + S
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+A I + R+ SM+ L PN Y+ +I LCK K++ A ++L +M +
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 371
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ C +V A M + PD +TYN+++ + G D A
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
V++ M P+V TY ++ GLCK++ +L +A YF+ M + G PP S L + L
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRR-QLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490
Query: 301 VGLGFLDIIEILADKMERS 319
G L+ +L D+MERS
Sbjct: 491 CKSGKLEGGCMLFDEMERS 509
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 3/236 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+H LCK + + A + K F TP TY+IL+ GL G++ A
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R FDEMLE C D+ +N L+ CKAGN D A G+ +M S P+ +Y I
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + MK P+ F Y+ ++ LCK+ K+E L DEM ER +
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM-ERSGVAN 513
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++ + C V+ A+ L + KE MP + YN ++ L++ + + T
Sbjct: 514 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKVNPCT 568
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 39/327 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G P + L+ L K K A++ F + A Y+ L+RGL G+
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
+ +A ++ M + C D++ +++++ +CKAG I A
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345
Query: 99 --HG------------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
HG ML +M+ PD +Y+I I C++ D+ + D M
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+V+TYN ++ CK + A + D+M +P+ +Y +++ C R ++ A
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKAS 465
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + PD Y+ ++ L + G+ + +++ ME+ G S + ++ H L
Sbjct: 466 LYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-L 524
Query: 265 CKKKGKLEEACKYFEMMVDEGIP-PYS 290
CK +++EA F + EG+P PY+
Sbjct: 525 CKAN-RVDEAVSLFNAIRKEGMPHPYA 550
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 145/311 (46%), Gaps = 3/311 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARK 65
P + + L+ C + + A + ++ P++KT+++++ GL G++ A
Sbjct: 92 PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F+ C +DI + ++++ + K I +A ++ ++ + G P +Y+ ++ C
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + +L + P+V TY +I L K ++ EAY+L EM RG D
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
Y A++ ++ A + MT + +PD T + ++ L + GR A +++SM
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
E RG P+ YS ++HGLCK + K++ A + M P + T +L + L G
Sbjct: 332 EARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 306 LDIIEILADKM 316
++ D+M
Sbjct: 391 VEAARAFFDEM 401
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 7/299 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
FG + S++ + LL + K + A N F P V+T+++L+ G E E
Sbjct: 53 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112
Query: 63 ARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A + EM E + HN +L +CK+G + A + G D +Y+ +
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ I +++ + P + TYN ++ LCK ++EEA LL ++++ G
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y +++ A +L M ++ D Y +++ L++ G+ +A+ V
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+++M +G P V T S M+ GLC K G++ A + F+ M G+ P YS+ + L
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLC-KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G KP +Y + L+ CK + A FD+ + +P V TY L+ GL +
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A F M ER CP D ++SL++ +CK+G ++ + EM G +
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRL 520
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
H C+AN + + +++++ + P+ + YN II L K+ KV
Sbjct: 521 IFH-LCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKV 564
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 162/314 (51%), Gaps = 3/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + L+ CK + A Q + + P V TY+ ++R L D G+L EA
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLE--RMSVAPDVVTYNTILRSLCDSGKLKEAM 229
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D ++R+C D++ + L+EA C + +A +L EMR G +PD +Y++ I+
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + L++M Y PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M K MP+ +YN +L + + DRA E E
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG YP + TY+ ++ LC K GK + A + + +G P T + + L +G
Sbjct: 410 MVSRGCYPDIVTYNTLLTALC-KDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 468
Query: 305 FLDIIEILADKMER 318
+ L ++M R
Sbjct: 469 KTEYAAELLEEMRR 482
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A C V A + D K P V TY++L+ G+ G L EA K
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 301
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M C +++ HN +L +MC G +A +L +M G P +++I I+ C
Sbjct: 302 LNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCR 361
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ VL+ M ++ +PN +YN ++ C+ +K++ A + L+ M+ RG PD +
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C + + A+ ++ +++ + P TYN V+ L +VG+ + A E+ E M
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++G P + TYS ++ GL +GK++EA K F M I P + T
Sbjct: 482 RKGLKPDIITYSTLLRGL-GCEGKVDEAIKIFHDMEGLSIKPSAVT 526
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G KP + + L++ +CK + A +F +N + P V T++I++R + G
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +ML + C ++ N L+ +C+ + A +L +M G P++ SY+
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC+ + L+ M P++ TYN ++ LCK+ K + A ++L+++ +G
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + A L+ M ++ + PD TY+ +L+ L G+ D A
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ ME PS TY+ ++ GLCK + + A + MV++G P +T +L
Sbjct: 510 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQ-QTSRAIDFLAYMVEKGCKPTKATYTIL 565
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 147/268 (54%), Gaps = 10/268 (3%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
+I +R L GEL E K + M+ + D++A SL+ C++G +A ++ + +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
GA PD +Y++ I +C++ +I +VL+ R ++ P+V TYN I+R LC + K++E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRSLCDSGKLKE 227
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A ++LD ++R PD +Y ++ C+ + V A++L+ M K+ PD TYN+++
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ + GR D A + +M G P+V T+++++ +C G+ +A + M+ +G
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC-STGRWMDAERLLADMLRKGCS 346
Query: 288 PYSSTVEML-----RNRLVGLGFLDIIE 310
P T +L R RL+G +D++E
Sbjct: 347 PSVVTFNILINFLCRKRLLGRA-IDVLE 373
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 152/333 (45%), Gaps = 36/333 (10%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHG 100
P V + L+RG G+ +A ++ E+LE V D++ +N L+ CK+G ID+A
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIM-EILENSGAVPDVITYNVLIGGYCKSGEIDKALQ 198
Query: 101 MLREM------------------------------RSIGAE--PDAFSYSIFIHAFCEAN 128
+L M R + E PD +Y+I I A C +
Sbjct: 199 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDS 258
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ ++LD M++ P+V TYN +I +CK +++EA + L+ M G P+ ++N
Sbjct: 259 GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHN 318
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
IL C A RL+ M ++ P T+N+++ L R RA +V E M K
Sbjct: 319 IILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 378
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD- 307
G P+ +Y+ ++HG C++K K++ A +Y E+MV G P T L L G D
Sbjct: 379 GCMPNSLSYNPLLHGFCQEK-KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437
Query: 308 IIEILADKMERSTSCTIQELANAMRGKTGFRKS 340
+EIL + S + + G T K+
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 5/246 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A N L + + G ++E L M G PD + + I FC + R+++
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
++ VP+V TYN +I CK+ ++++A Q+L+ M PD +YN IL CD +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ A+ ++ R + PD TY ++++ +A ++ + M K+G P V TY+V
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
+++G+C K+G+L+EA K+ M G P T ++ + G ++D +LAD + +
Sbjct: 285 LINGIC-KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Query: 319 STSCTI 324
S ++
Sbjct: 344 GCSPSV 349
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC+++ + A + KH P +Y+ L+ G +
Sbjct: 340 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKK 399
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N+LL A+CK G D A +L ++ S G P +Y+
Sbjct: 400 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNT 459
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +L+ M+R L P++ TY+ ++R L KV+EA ++ +M
Sbjct: 460 VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLS 519
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNAI+ C + + A+ + M ++ P + TY ++++ + G + A
Sbjct: 520 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEAL 579
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E+ + RGF S V V
Sbjct: 580 ELLNELCSRGFVKKSSAEQVAV 601
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 12/325 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL LCK +VK A + F+ + F VK Y++L+ G +G A +EM +
Sbjct: 172 LLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGV 231
Query: 76 PVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+++ +N +L +C+ + I +A + EMR G EPD S+SI +H +
Sbjct: 232 EPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYS 291
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A+ V L MK + PNV TY +I+ LC ++EEA L+DEM+ G +P
Sbjct: 292 RAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAA 351
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVM-PDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN + R + + AL+ +M ++ + P HTY +++ + ++ E+W
Sbjct: 352 TYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWND 411
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + G P + +Y+V++HGLC+ K K EAC+YF M+++G P T E L L+
Sbjct: 412 MMESGVGPDLDSYTVLIHGLCESK-KWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSD 470
Query: 305 FLDIIEILADKMERSTSCTIQELAN 329
L L ++++ + E N
Sbjct: 471 MLRTWRRLKKRLDQESITFGSEFQN 495
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 111/256 (43%), Gaps = 16/256 (6%)
Query: 5 GIKPSIYDLDQLLHALCKR----------KHVKVAHQFFDNAKHE-FTPTVKTYSILVRG 53
G++P++ + +L+ +C++ + ++ A + FD + P V ++SI++
Sbjct: 230 GVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHV 289
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
+ M E+ +++ + S+++ +C G I+EA ++ EM G P
Sbjct: 290 YSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPC 349
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNCIIRKLCKNEKVEEAYQLL 172
A +Y+ F + D + MK L P TY +I K + + ++
Sbjct: 350 AATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIW 409
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
++M+E G PD SY ++ C+ + A + M ++ +P + T+ + + L++
Sbjct: 410 NDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQS 469
Query: 233 GRFDRATEVWESMEKR 248
W ++KR
Sbjct: 470 DML----RTWRRLKKR 481
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P+ V TY+ +++ L G +
Sbjct: 306 MKEKGICPN----------------------------------VVTYTSVIKCLCSCGRI 331
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYSI 119
EA L DEM+ +N + + D+A ++M+ G EP +Y +
Sbjct: 332 EEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGV 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F +A+ I V + + M + P++ +Y +I LC+++K EA Q EMIE+G
Sbjct: 392 LIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
P + ++ + + RL R+ +E++
Sbjct: 452 FLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESI 487
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 177/363 (48%), Gaps = 50/363 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G +P Y + L+ C+ V VA FD F V +Y+ L+ G + G
Sbjct: 37 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-- 117
+ EA +LF EM + D+ + +L++ +CKAG +E MLR M+ +G P +Y
Sbjct: 97 IDEAVELFGEMDQP----DMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAA 152
Query: 118 ---------------------------------SIFIHAFCEANDIHSVFRVLDSMKRYN 144
+ I+A+C+ + RVL+ MK
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV+TYN +++ C KV +A LL++M G NPD +YN ++ C + A
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAF 272
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + ++ D++TYN ++ L + GR D+A +++S+E RG P+ T++ +++GL
Sbjct: 273 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML---RNRLVGLGFLDIIEILADKME 317
C K GK++ A K+ E MV G P YSS +E L + GL F I E+L ++
Sbjct: 333 C-KSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF--IGEMLQKDVK 389
Query: 318 RST 320
ST
Sbjct: 390 PST 392
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G +PS ++ C + K A + + P V T + ++ G
Sbjct: 138 MKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 197
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A ++ + M R C ++ +N+L++ C G + +A +L +MR G PDA +Y++
Sbjct: 198 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNL 257
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C I S FR+L M+ L+ + +TYN +I LCK+ + ++A L D + RG
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+++ C +V++A + + +M PD +TY+ ++ L ++
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++ PS Y++++H L K++ A + E MV G P
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE-MVSSGCNP 425
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + +++A CK + A + + K P V TY+ LV+G + G+
Sbjct: 173 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 232
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ +A L ++M R C V D + +N L+ C G+I+ A +LR M G D ++Y
Sbjct: 233 VHKAMALLNKM--RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 290
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+A C+ + DS++ + PN T+N +I LCK+ KV+ A++ L++M+
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS 350
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD ++Y++ + + C L I M +++V P Y +V+ L++ +
Sbjct: 351 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 410
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
W M G P V TY+ + C +G+L EA M G+
Sbjct: 411 VARTWGEMVSSGCNPDVVTYTTSMRAYC-IEGRLNEAENVLMEMSKNGV 458
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 1/265 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ C H++ A + + + TY+ L+ L G +A
Sbjct: 247 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 306
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LFD + R + + NSL+ +CK+G +D A L +M S G PD ++YS FI
Sbjct: 307 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEH 366
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + M + ++ P+ Y +I KL K + EM+ G NPD
Sbjct: 367 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 426
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y + +C +N A ++ M+K V D YN ++ +G+ D A + +
Sbjct: 427 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 486
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK 268
M P+ TY +++ L + +
Sbjct: 487 QMTSVASVPNQFTYFILLRHLVRMR 511
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 18/285 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KPS + ++H L K R + VA + + P V TY+ +R G
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA + EM + VD +A+N+L++ G D A +L++M S+ + P+ F+Y I
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502
Query: 120 FIH-----------------AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+ +A ++ VF + D MK+ +PN TY+ I+ ++
Sbjct: 503 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 562
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ EEA L+ M E + +E Y A++ C A L+ M + +P +Y
Sbjct: 563 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSY 622
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+L L+ G+ D+A E++ + + + P + V++ GL KK
Sbjct: 623 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 667
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ ++R L +L+ A + M+ D NSL+ C+ +D A + +M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G D SY+ I FCE I + M + P++ Y +++ LCK +
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EE +L M E G P +Y A++ + C + A ++ M ++ + P T V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + GR A V E M+ RG P+V TY+ +V G C +GK+ +A M G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC-NEGKVHKAMALLNKMRVCG 247
Query: 286 IPPYSSTVEML 296
+ P + T +L
Sbjct: 248 VNPDAVTYNLL 258
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 5/183 (2%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y+ I + C D+ S R L M R P+ +T+N +I C+ +V+ A L D+M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
RG D SY A++ C+ ++ A+ L M + PD H Y ++K L + GR
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ + M++ G+ PS Y+ +V C ++ K +EA + + M ++G+ P T
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWER-KAKEAEEMLQEMFEKGLAPCVVTCTA 187
Query: 296 LRN 298
+ N
Sbjct: 188 VIN 190
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 156/303 (51%), Gaps = 13/303 (4%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + LL LCK K+ KVA + F+ K+++ P K Y+IL+ G V A
Sbjct: 178 LGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRSDMA 237
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPD 113
+K +M++ +I+ +N LL +C+ + ++ A +L+EM G EPD
Sbjct: 238 QKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPD 297
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
SYSI +H + A+ + SMK + P V TY +I+ L ++E+A LL
Sbjct: 298 VTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLG 357
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK--ENVMPDRHTYNMVLKLLVR 231
EM+ G P +YN + R +V+ AL L +M PD H+YN++L + ++
Sbjct: 358 EMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIK 417
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
+ R + E+W M +R P + +Y+++VHG C K+ K EAC++F M+++G P
Sbjct: 418 LDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKE-KWREACQFFMEMIEKGFLPQKI 476
Query: 292 TVE 294
T E
Sbjct: 477 TFE 479
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 19/262 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF------FDNAKHEFT-----PTVKTYSI 49
M++ GI+P+I + LL+ +C+ + ++F +N E P V +YSI
Sbjct: 244 MIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSI 303
Query: 50 LVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
++ + +F M +R CP + + S+++ + G +++A +L EM S
Sbjct: 304 ILHVYSRAHKAELCLCMFRSMKDRGICPT-VATYTSVIKCLASCGRLEDAESLLGEMVSE 362
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR--YNLVPNVFTYNCIIRKLCKNEKVE 166
G P +Y+ F + D+ + + MK P++ +YN ++ K ++ E
Sbjct: 363 GVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHE 422
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+L ++M ER PD SY ++ C + + A + M ++ +P + T+
Sbjct: 423 TVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPY 482
Query: 227 KLLVRVGRFDRATEVWESMEKR 248
+ L++ W ++KR
Sbjct: 483 RGLIQADML----RTWRRLKKR 500
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 165/316 (52%), Gaps = 3/316 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ G P + + L+ CK + A Q D + P V TY+ ++R L D G+L +
Sbjct: 120 QSGAVPDVITYNVLISGYCKSGEIDNALQVLD--RMNVAPDVVTYNTILRTLCDSGKLKQ 177
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ D L+++C D++ + L+EA CK + +A +L EMR+ G++PD +Y++ I+
Sbjct: 178 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 237
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + L++M Y PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 238 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++N ++ + C + + A+ ++ +M P+ +YN +L + + DRA E
Sbjct: 298 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 357
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M RG YP + TY+ ++ LC K GK++ A + + +G P T + + L
Sbjct: 358 DIMVSRGCYPDIVTYNTLLTALC-KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 416
Query: 303 LGFLDIIEILADKMER 318
+G + L D+M R
Sbjct: 417 VGKTERAIKLLDEMRR 432
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 153/286 (53%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A CK V A + D +++ + P V TY++L+ G+ G L EA K
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M C +++ HN +L +MC G +A +L +M G P +++I I+ C
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ +L+ M + PN +YN ++ CK +K++ A + LD M+ RG PD +
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V++A+ ++ +++ + P TYN V+ L +VG+ +RA ++ + M
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++G P + TYS +V GL ++GK++EA K+F + GI P + T
Sbjct: 432 RKGLKPDIITYSSLVSGL-SREGKVDEAIKFFHDLEGLGIRPNAIT 476
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 152/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + + L++ +CK + A +F +N + P V T++I++R + G +A
Sbjct: 224 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 283
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +ML + C ++ N L+ +C+ G + A +L +M G P++ SY+ +H
Sbjct: 284 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 343
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + LD M P++ TYN ++ LCK+ KV+ A ++L+++ +G +P
Sbjct: 344 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 403
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ + A++L+ M ++ + PD TY+ ++ L R G+ D A + +
Sbjct: 404 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 463
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+E G P+ TY+ ++ GLCK + + + A + M+ + P +T +L
Sbjct: 464 DLEGLGIRPNAITYNSIMLGLCKSR-QTDRAIDFLAYMISKRCKPTEATYTIL 515
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 136/257 (52%), Gaps = 8/257 (3%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL + K + M+ R DI+ SL+ C+ G +A ++ + GA PD +Y
Sbjct: 71 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I +C++ +I + +VLD R N+ P+V TYN I+R LC + K+++A ++LD ++
Sbjct: 131 NVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ PD +Y ++ C + V A++L+ M + PD TYN+++ + + GR D
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + +M G P+V T+++++ +C G+ +A K M+ +G P T +L
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMC-STGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 298 NRLVGLGFL----DIIE 310
N L G L DI+E
Sbjct: 307 NFLCRQGLLGRAIDILE 323
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 36/305 (11%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHG 100
P + + L+RG +G+ +A + E+LE+ V D++ +N L+ CK+G ID A
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVM-EILEQSGAVPDVITYNVLISGYCKSGEIDNALQ 148
Query: 101 MLREM------------------------------RSIGAE--PDAFSYSIFIHAFCEAN 128
+L M R + E PD +Y+I I A C+ +
Sbjct: 149 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 208
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ ++LD M+ P+V TYN +I +CK +++EA + L+ M G P+ ++N
Sbjct: 209 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 268
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
IL C A +L++ M ++ P T+N+++ L R G RA ++ E M
Sbjct: 269 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 328
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
G P+ +Y+ ++HG CK+K K++ A +Y ++MV G P T L L G +D+
Sbjct: 329 GCTPNSLSYNPLLHGFCKEK-KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387
Query: 309 -IEIL 312
+EIL
Sbjct: 388 AVEIL 392
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + H TP +Y+ L+ G +
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + D M+ R C DI+ +N+LL A+CK G +D A +L ++ S G P +Y+
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++LD M+R L P++ TY+ ++ L + KV+EA + ++ G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+I+ C + + A+ + M + P TY ++++ + G A
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++ + RG S V V
Sbjct: 530 DLLNELCSRGLVKKSSAEQVAV 551
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
L + + G +++ L M G PD + I FC V++ +++
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP+V TYN +I CK+ +++ A Q+LD M PD +YN IL CD ++ A+
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ R ++ PD TY ++++ + +A ++ + M +G P V TY+V+++G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTI 324
K+G+L+EA K+ M G P T ++ + G ++D ++L+D + + S ++
Sbjct: 241 -KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 165/316 (52%), Gaps = 3/316 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ G P + + L+ CK + A Q D + P V TY+ ++R L D G+L +
Sbjct: 177 QSGAVPDVITYNVLISGYCKSGEIDNALQVLD--RMNVAPDVVTYNTILRTLCDSGKLKQ 234
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ D L+++C D++ + L+EA CK + +A +L EMR+ G++PD +Y++ I+
Sbjct: 235 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 294
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + L++M Y PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 295 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++N ++ + C + + A+ ++ +M P+ +YN +L + + DRA E
Sbjct: 355 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 414
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M RG YP + TY+ ++ LC K GK++ A + + +G P T + + L
Sbjct: 415 DIMVSRGCYPDIVTYNTLLTALC-KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 473
Query: 303 LGFLDIIEILADKMER 318
+G + L D+M R
Sbjct: 474 VGKTERAIKLLDEMRR 489
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 153/286 (53%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A CK V A + D +++ + P V TY++L+ G+ G L EA K
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M C +++ HN +L +MC G +A +L +M G P +++I I+ C
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ +L+ M + PN +YN ++ CK +K++ A + LD M+ RG PD +
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V++A+ ++ +++ + P TYN V+ L +VG+ +RA ++ + M
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++G P + TYS +V GL ++GK++EA K+F + GI P + T
Sbjct: 489 RKGLKPDIITYSSLVSGL-SREGKVDEAIKFFHDLEGLGIRPNAIT 533
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 152/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + + L++ +CK + A +F +N + P V T++I++R + G +A
Sbjct: 281 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 340
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +ML + C ++ N L+ +C+ G + A +L +M G P++ SY+ +H
Sbjct: 341 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 400
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + LD M P++ TYN ++ LCK+ KV+ A ++L+++ +G +P
Sbjct: 401 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 460
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ + A++L+ M ++ + PD TY+ ++ L R G+ D A + +
Sbjct: 461 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 520
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+E G P+ TY+ ++ GLCK + + + A + M+ + P +T +L
Sbjct: 521 DLEGLGIRPNAITYNSIMLGLCKSR-QTDRAIDFLAYMISKRCKPTEATYTIL 572
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 136/257 (52%), Gaps = 8/257 (3%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL + K + M+ R DI+ SL+ C+ G +A ++ + GA PD +Y
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I +C++ +I + +VLD R N+ P+V TYN I+R LC + K+++A ++LD ++
Sbjct: 188 NVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ PD +Y ++ C + V A++L+ M + PD TYN+++ + + GR D
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + +M G P+V T+++++ +C G+ +A K M+ +G P T +L
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMC-STGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Query: 298 NRLVGLGFL----DIIE 310
N L G L DI+E
Sbjct: 364 NFLCRQGLLGRAIDILE 380
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 36/305 (11%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHG 100
P + + L+RG +G+ +A + E+LE+ V D++ +N L+ CK+G ID A
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVM-EILEQSGAVPDVITYNVLISGYCKSGEIDNALQ 205
Query: 101 MLREM------------------------------RSIGAE--PDAFSYSIFIHAFCEAN 128
+L M R + E PD +Y+I I A C+ +
Sbjct: 206 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 265
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ ++LD M+ P+V TYN +I +CK +++EA + L+ M G P+ ++N
Sbjct: 266 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 325
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
IL C A +L++ M ++ P T+N+++ L R G RA ++ E M
Sbjct: 326 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 385
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
G P+ +Y+ ++HG CK+K K++ A +Y ++MV G P T L L G +D+
Sbjct: 386 GCTPNSLSYNPLLHGFCKEK-KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 444
Query: 309 -IEIL 312
+EIL
Sbjct: 445 AVEIL 449
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + H TP +Y+ L+ G +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + D M+ R C DI+ +N+LL A+CK G +D A +L ++ S G P +Y+
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++LD M+R L P++ TY+ ++ L + KV+EA + ++ G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+I+ C + + A+ + M + P TY ++++ + G A
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++ + RG S V V
Sbjct: 587 DLLNELCSRGLVKKSSAEQVAV 608
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
L + + G +++ L M G PD + I FC V++ +++
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP+V TYN +I CK+ +++ A Q+LD M PD +YN IL CD ++ A+
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ R ++ PD TY ++++ + +A ++ + M +G P V TY+V+++G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTI 324
K+G+L+EA K+ M G P T ++ + G ++D ++L+D + + S ++
Sbjct: 298 -KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 163/299 (54%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP++ + ++ +LCK + V A F P TY+ +V GL +G+
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +LF M + C D++ +N +++++ K +++A L EM G PD +Y+
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C ++ R+ M++ P+V YN II LCK+ V +A + L EM++RG
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ IL C+ +++ A +L M NVMP+ T+++++ L + G A
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V+E+M ++G P++ TY+ +++G C + K+ EA K FE+MV +G P + +L N
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYC-LRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 170/337 (50%), Gaps = 10/337 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDV 57
M + GI+P + L++ +C +KVA + ++ + HE P V +Y+ L+ GL +
Sbjct: 154 MFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE--PDVISYNTLINGLCNS 211
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + A +F +M + C +++ +N++++++CK +++A L EM G PDA +Y
Sbjct: 212 GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITY 271
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H C ++ R+ M++ P+V TYN II L K+ V +A L EM++
Sbjct: 272 NSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVD 331
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G PD +Y IL C ++N A+RL +M ++ PD YN ++ L + +
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVND 391
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A E M RG P+ TYS ++HG C G+L+EA + F+ MV + P + T +L
Sbjct: 392 AMEFLSEMVDRGIPPNAVTYSTILHGFC-NLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450
Query: 298 NRLVGLGFLD----IIEILADKMERSTSCTIQELANA 330
+ L G + + E + +K T L N
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 164/308 (53%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP + + ++ +L K + V A F P V TY+ ++ GL +G+
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +LF +M ++ C D++A+N++++++CK +++A L EM G P+A +YS
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC + ++ M N++PN T++ ++ LC+ V EA + + M E+G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YNA++ +C R ++N A ++ M + PD H+YN+++ R D+A
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + P+ TY+ ++ GLC G+L +A + F+ M G+ P T +L N
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLC-YVGRLLDAQELFKKMCSSGMLPTLMTYSILLNG 592
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 593 LCKHGHLD 600
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 13/326 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M +PSI + + L ++ K K + N F T TV + +IL+ L +
Sbjct: 84 MARMNPRPSIVEFGKFLGSIAKMKQYSTV-VYLCNQMDLFGVTHTVYSLNILINCLCRLN 142
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A ++ +M + D++ +L+ +C G I A + EM G EPD SY+
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C + + + V M++ PNV TYN II LCK+ V +A L EM+ R
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR 262
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN+I+ C ++N A RL RM + PD TYN+++ L + + A
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ M +G P V TY+ ++HGLC G+L EA + F+ M +G P Y++ ++
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLC-YLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381
Query: 295 ML-RNRLVGLGFLDIIEILADKMERS 319
L ++RLV D +E L++ ++R
Sbjct: 382 SLCKDRLVN----DAMEFLSEMVDRG 403
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 155/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP + + ++ +LCK + V A +F P TYS ++ G ++G+
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +LF EM+ R + L + L++ +C+ G + EA + M G EP+ ++Y+
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +C ++ +V + M P++ +YN +I C + ++++A LL +M +
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN I+ C + A L +M ++P TY+++L L + G D A
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++SM+++ P + Y++++ G+ GKLE A F + +GI P T ++
Sbjct: 604 KLFKSMKEKKLEPDIILYTILIEGMF-IGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKG 662
Query: 300 LVGLGFLD 307
L+ G D
Sbjct: 663 LLKEGLSD 670
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 122/250 (48%), Gaps = 4/250 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV + P+ L+ LC+ V A F+ + P + TY+ L+ G +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EARK+F+ M+ + C D+ ++N L+ C + +D+A +L +M P+ +Y+
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + + M ++P + TY+ ++ LCK+ ++EA +L M E+
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ ++ +A L ++++ + + P TYN+++K L++ G D A
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAY 673
Query: 240 EV---WESME 246
E+ W+ M+
Sbjct: 674 ELFRKWKMMK 683
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
++D+A M + P + F+ + + +V + + M + + V++ N
Sbjct: 73 SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+ V+ A + +M + G PD ++ ++ C+ ++ +A+ L M +
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
PD +YN ++ L G + A V++ ME+ G P+V TY+ ++ LCK + + +
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR-LVND 251
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
A + MV GIPP + T + + L LG L+ L +ME++
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN 297
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 155/296 (52%), Gaps = 7/296 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + ++ CK + A D + +P V TY+ ++R L D G+L +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLD--RMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D ML+R C D++ + L+EA C+ + +A +L EMR G PD +Y++ ++
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + L+ M PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M K P+ +YN +L + + DRA E E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M RG YP + TY+ M+ LC K GK+E+A + + +G P Y++ ++ L
Sbjct: 405 MVSRGCYPDIVTYNTMLTALC-KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ P + L+ A C+ V A + D + TP V TY++LV G+ G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA K ++M C +++ HN +L +MC G +A +L +M G P +++I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + +L+ M ++ PN +YN ++ CK +K++ A + L+ M+ RG
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +L C +V A+ ++ +++ + P TYN V+ L + G+ +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++ + M + P TYS +V GL ++GK++EA K+F G+ P + T
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGL-SREGKVDEAIKFFHEFERMGVRPNAVT 521
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 168/328 (51%), Gaps = 8/328 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + + L++ +CK + A +F D P V T++I++R + G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL +ML + ++ N L+ +C+ G + A +L +M G +P++ SY+
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC+ + L+ M P++ TYN ++ LCK+ KVE+A ++L+++ +G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + A++L+ M +++ PD TY+ ++ L R G+ D A
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + E+ G P+ T++ ++ GLCK + + + A + M++ G P ++ +L
Sbjct: 505 KFFHEFERMGVRPNAVTFNSIMLGLCKTR-QTDRAIDFLVYMINRGCKPTETSYTILIEG 563
Query: 300 LVGLGF----LDIIEILADK--MERSTS 321
L G L+++ L +K M+RS++
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKRSSA 591
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 143/276 (51%), Gaps = 7/276 (2%)
Query: 17 LHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L L + ++ +F +N H P + + L+RG +G+ +A K+ E+LE
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKIL-EVLEGSG 167
Query: 76 PV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
V D++ +N ++ CKAG I+ A +L M PD +Y+ + + C++ +
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VLD M + + P+V TY +I C++ V +A +LLDEM +RG PD +YN ++
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ A++ + M P+ T+N++L+ + GR+ A ++ M ++GF PSV
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
T++++++ LC +KG L A E M G P S
Sbjct: 345 VTFNILINFLC-RKGLLGRAIDILEKMPKHGCQPNS 379
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 137/264 (51%), Gaps = 8/264 (3%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+R L GEL E K + M+ DI+ +L+ C+ G +A +L + GA
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD +Y++ I +C+A +I++ VLD R ++ P+V TYN I+R LC + K+++A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+LD M++R PD +Y ++ C + V A++L+ M PD TYN+++ +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A + M G P+V T+++++ +C G+ +A K M+ +G P
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSV 344
Query: 291 STVEMLRNRLVGLGFL----DIIE 310
T +L N L G L DI+E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILE 368
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+ L + + G ++E L M G PD + I FC ++L+ ++
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
VP+V TYN +I CK ++ A +LD M +PD +YN IL CD ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ ++ RM + + PD TY ++++ R +A ++ + M RG P V TY+V+V+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
G+C K+G+L+EA K+ M G P T ++ + G ++D ++LAD + + S
Sbjct: 283 GIC-KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 322 CTI 324
++
Sbjct: 342 PSV 344
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + KH P +Y+ L+ G +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N++L A+CK G +++A +L ++ S G P +Y+
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A ++LD M+ +L P+ TY+ ++ L + KV+EA + E G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+I+ C + + A+ + M P +Y ++++ L G A
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEAL 574
Query: 240 EVWESMEKRGFYPSVSTYSV 259
E+ + +G S V
Sbjct: 575 ELLNELCNKGLMKRSSAEQV 594
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 183/382 (47%), Gaps = 52/382 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L++ +CK ++ A +FFD P TY+ L+ G G
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +++DEM+ P I+ +N+LL C +G ++EA G+LR M G PD SYS
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ F++ M + P+ TY+ +I+ LC+ ++ EA L EM+ +
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y +++ +C ++N AL L M K+ +PD TYN+++
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL+++ G + A +V+ESM KR
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P+ + Y+V++HG C + G + +A K ++ MVD G P++ T+ L L G + +
Sbjct: 634 QKPNEAVYNVIIHGHC-RDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQL 692
Query: 310 EILADKMERSTSCTIQELANAM 331
++ + RS + EL+ A+
Sbjct: 693 NLVIRDILRSCKLSDAELSKAL 714
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ + +++ LC+ ++ + + + F P TY+ LV G VG +A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EML P D++ + SL+ MCKAGN++ A +M G P+ +Y+ I+
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + + +R+ D M R P + TYN ++ C + ++EEA LL M +G +PD
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY+ I+A C E++ A ++ M ++ V PD TY+ +++ L R + A ++++
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M + P TY+ +++G C K+G L EA + M+ +G P + T +L N L
Sbjct: 508 EMLNKSLLPDEFTYTSLINGYC-KEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G P + + +L ++ + RK V A + + + + V +Y+IL+RG G L
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ F+EM +C +++ +N+++ A CK IDEA +LR M G EP+ +Y++ I+
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I VL M R P+ TYN ++ CK +A L EM+ G P
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y +++ C +N A+ +M + P+ TY ++ + G D A +W
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M + GF P++ TY+ +++G C G++EEA M +G+ P
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHC-VSGRMEEAIGLLRGMEGKGLSP 446
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 163/352 (46%), Gaps = 37/352 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ +++ + L+ C ++++ +FF+ ++ P V TY+ ++ +
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL M ++L +N ++ +C+ G I+E G+L EM G PD +Y+
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK----NEKVE--------- 166
++ +C+ + H + M R L P+V TY +I +CK N +E
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 167 ----------------------EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
EAY++ DEMI G P +YNA+L HC + A+
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ M + + PD +Y+ ++ R DRA ++ M ++G P TYS ++ GL
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
C+++ +L EAC F+ M+++ + P T L N G L+ L D+M
Sbjct: 494 CEQR-RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 126/242 (52%), Gaps = 2/242 (0%)
Query: 79 ILAHNSLLEAMCKAGN-IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+L++N++L+++ + + A + REM + G + FSY+I I FC A ++ R
Sbjct: 167 VLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFF 226
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ M+R +PNV TYN +I CK ++++EA++LL M G P+ +YN ++ C
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRV 286
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ ++ M ++ PD TYN ++ +VG F +A + M + G P V TY
Sbjct: 287 GRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTY 346
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ +++ +CK G L A ++F+ M G+ P T L N GF+D + D+M
Sbjct: 347 TSLINTMCKA-GNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405
Query: 318 RS 319
RS
Sbjct: 406 RS 407
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 98/250 (39%), Gaps = 42/250 (16%)
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCI-------------------------------- 155
N I ++D K +P V +YN I
Sbjct: 146 NFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFS 205
Query: 156 ----IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
IR C +E + +EM P+ +YN ++ +C ++ A +L+ M
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
E + P+ TYNMV+ L RVGR + + V M+++GF P TY+ +V+G C K G
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYC-KVGNF 324
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME----RSTSCTIQEL 327
+A M+ G+PP T L N + G L+ D+M R T L
Sbjct: 325 HQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSL 384
Query: 328 ANAMRGKTGF 337
N K GF
Sbjct: 385 INGFSQK-GF 393
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ + P + L++ CK + A D K F P TY++L+ GL
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568
Query: 60 LSEARKL---------------FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
EA++L +D ++E ++ + +L++ C G ++EA +
Sbjct: 569 TREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFES 628
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +P+ Y++ IH C ++H ++ M + +P+ T +++ L +E
Sbjct: 629 MIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL-YSEG 687
Query: 165 VEEAYQLLDEMIERGAN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
++E L+ I R D A++ + ++ L+T M K+ +P
Sbjct: 688 MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 171/378 (45%), Gaps = 34/378 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M++ G P Y ++ +LC+ + A D AK F P V Y+IL R G
Sbjct: 151 MLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGR 210
Query: 60 LSEARKLF-------------------------------DEMLERKCPVDILAHNSLLEA 88
L +A ++F EM ERK D+ +N L++
Sbjct: 211 LKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDG 270
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+CKA D+A ML EM G PD +++ + C+A +L M N P+
Sbjct: 271 LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 330
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TYN +I LCK + V+ A L+DE + G PD +Y+ + C R ++ A L+
Sbjct: 331 CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 390
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M+ + P+ TYN ++ L + + ++A E+ ES+ GF P V TY+++V GLC K+
Sbjct: 391 EMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC-KE 449
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA 328
G+L++A K E M+ G P T L L G +D + +M S CT LA
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV-SKDCTADALA 508
Query: 329 NAMRGKTGFRKSRSEETE 346
+ SR++E +
Sbjct: 509 YVSLVNGYCKSSRTKEAQ 526
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 161/351 (45%), Gaps = 35/351 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+V G P + ++ LCK + A + + K TP+V TY+ L+ GL G
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 486
Query: 60 LSEARKLFDEMLERKCPVDILAH--------------------------------NSLLE 87
+ EA +F EM+ + C D LA+ N+L++
Sbjct: 487 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMD 546
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
CK G +DE + +M G P+ +Y+I + C+ + F L+SM VP
Sbjct: 547 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 606
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+V +YN II L K K +EA Q+LD+MI+ G PD +YN ++A C + A+ ++
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 666
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV-STYSVMVHGLCK 266
M K V PD TYN ++ L + R A E+ M + G S +TY+ ++ LC
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC- 725
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
K+G L++A + M G+ + T + +RL G LD L +M+
Sbjct: 726 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 34/321 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + ++ LCK + AH A+ P+ TY+ L+ GL
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+ L DE + D++ ++ L + +CK G IDEA +++EM G P+ +Y+
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A+ + +L+S+ VP+V TY I+ LCK ++++A ++++ M++RG
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD--------------------- 218
P +Y A++ C V+ A + M ++ D
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 219 ------RHT-----YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
R T YN ++ + GR D V+E M RG P++ TY++++ GLC K
Sbjct: 527 KVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC-K 585
Query: 268 KGKLEEACKYFEMMVDEGIPP 288
GK++EA + E M G P
Sbjct: 586 HGKVDEAFPFLESMHSAGCVP 606
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 7/315 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+I + ++ LCK V A F ++ P V +Y+I++ GL + EA
Sbjct: 568 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 627
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R++ D+M++ P D + +N+L+ CK D+A G+L+ M G +PD +Y+ I
Sbjct: 628 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687
Query: 124 FCEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ N + + ++ M R +V TYN II +LCK +++A L+D M G
Sbjct: 688 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN + C ++ A L++ M + + D +Y V+ L + + DRA+++
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLA 804
Query: 243 ESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M +G + T+++++ K K +L+EA +MV G P T M+ L
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTK-RLDEALTLLGLMVQRGCSPSVITYNMVITCLC 863
Query: 302 GLGFLDIIEILADKM 316
L +D L D+M
Sbjct: 864 KLDKVDKAWELFDEM 878
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 32/292 (10%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F + T + ++ L + G +F+ ML+ D ++ +++++C+ ID+A
Sbjct: 121 FKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAF 180
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEA-------------------------------N 128
ML + + G +P+ Y+I AFC+ N
Sbjct: 181 TMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKN 240
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
D L M + P+VFTYN +I LCK K ++A ++L EM++RG PD ++N
Sbjct: 241 DCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFN 300
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+I+ C + A L+ M + N P TYN ++ L + DRA ++ +
Sbjct: 301 SIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS 360
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
GF P V TYS++ GLC K+G+++EA + + M +G P T L + L
Sbjct: 361 GFVPDVVTYSILADGLC-KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 5/240 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
N L+ + + G+ D M M G PD+++Y + I + C+ N I F +LD
Sbjct: 126 FTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDK 185
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
K P V Y + R CK ++++A ++ + +PD +YNAI+ HC + +
Sbjct: 186 AKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----PSPDAIAYNAIIHGHCRKND 241
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ AL + M + V PD TYN+++ L + + D+A+E+ M RG P T++
Sbjct: 242 CDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNS 301
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
++ GLC K GK E A +M + P T L + L +D + L D+ S
Sbjct: 302 IMDGLC-KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS 360
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ ++ LCK +K A D+ H TY+I + L G L EA L EM
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 777
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYSIFIHAFCEANDIH 131
+ D +++ +++ +CKA +D A + REM ++ G + ++++ I AF + +
Sbjct: 778 LR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 834
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+L M + P+V TYN +I LCK +KV++A++L DEM RG SY ++
Sbjct: 835 EALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 894
Query: 192 AYHCDRAEVNMALRLITRMTKEN 214
C + AL+++ M +
Sbjct: 895 YGLCGQGRGKEALQVLEEMASSD 917
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ FT NC ++ L +N + + + M++ G PD ++Y+ ++ C +++ A ++
Sbjct: 124 STFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTML 183
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRF-------------------------------D 236
+ P+ Y ++ + + GR D
Sbjct: 184 DKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCD 243
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A E + M +R P V TY++++ GLCK K ++A + MVD G+ P + T +
Sbjct: 244 GALEFLKEMNERKVAPDVFTYNILIDGLCKAS-KTDKASEMLHEMVDRGVTPDTVTFNSI 302
Query: 297 RNRLVGLGFLD----IIEILADKMERSTSCTIQELANAM 331
+ L G + ++ ++A++ R + CT L + +
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDV 57
M G++ + + + LCK + A D + E + Y+ ++ GL
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS-----YTTVIIGLCKA 794
Query: 58 GELSEARKLFDEMLERKCPVDILAH--NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+L A KL EM+ K + I +H N L++A K +DEA +L M G P
Sbjct: 795 EQLDRASKLAREMVAVK-GLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVI 853
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y++ I C+ + + + + D M +V + +Y +I LC + +EA Q+L+EM
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Query: 176 IERGANPDEWSYNAI 190
D+ + +
Sbjct: 914 ASSDCEIDDLKWEDV 928
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG ++ N L + + + RM PD +TY++V+K L ++ + D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+A + + + RGF P VS Y+++ C K G+L++A + F
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFC-KTGRLKDALEIF 218
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ R+ +M + + P HT+NM++K ++
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VW+ M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 495 VWDEMIKKGICPDDNSYTVLIRGLI-SEGKSREACRYLEEMLDKGM 539
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+NS++ + K + +L EM + G +++I + AF A + + + M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
K+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNL 314
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A R+ M + PD +N++L+ L+R + A +++ M+ +G P+V +Y++M
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 375 IRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 414
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + + +M EP ++++ + +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V D M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 483 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Query: 184 EWSYNAILA 192
YN A
Sbjct: 543 LIDYNKFAA 551
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ +D K P +Y++L+RGL G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N + G
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 254 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 373
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 374 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 433
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ R+ +M + + P HT+NM++K ++
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VW+ M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 494 VWDEMIKKGICPDDNSYTVLIRGLI-SEGKSREACRYLEEMLDKGM 538
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D +NS++ + K + +L EM + G +++I + AF A + +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ MK+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 310
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A R+ M + PD +N++L+ L+R + A +++ M+ +G P+V +Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++M+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 371 TIMIRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 413
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + + +M EP ++++ + +
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V D M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 184 EWSYNAILA 192
YN A
Sbjct: 542 LIDYNKFAA 550
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ +D K P +Y++L+RGL G+
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N + G
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 165/320 (51%), Gaps = 3/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M +FG++P + D ++LL ALCK +HV+ A + FD K +F P +K+Y+IL+ G G
Sbjct: 205 MEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQN 264
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +++ EM + D + + L+ A CKA D A + +M + P Y
Sbjct: 265 LLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCT 324
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + + K P TYN ++ C++ ++++AY+++DEM + G
Sbjct: 325 LINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCG 384
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRA 238
P +Y+ IL + A R+ M+ E P TY +V+++ R D A
Sbjct: 385 VGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMA 444
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
VW+ M+ +G P + +S +++ LC + KL+EACKYF M+D GI P ++ L+
Sbjct: 445 LRVWDEMKAKGVLPGMHMFSTLINSLCYE-NKLDEACKYFHEMLDMGIRPPAAMFSNLKQ 503
Query: 299 RLVGLGFLDIIEILADKMER 318
L+ G D++ ILA K+++
Sbjct: 504 TLLDEGKQDMVLILAQKLDK 523
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+N+L+EA+ K ++ +MRS G ++++ + A + + M+
Sbjct: 148 YNALIEALGKIKQFKMIWNLVNDMRSKGLLTQE-TFALISRRYARARKVKEAVETFEKME 206
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
++ L P + +N ++ LCK+ VE A ++ D+M +R PD SY +L +
Sbjct: 207 KFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLL 266
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+ M E PD TY +++ + R+D A E++ ME P+ Y ++
Sbjct: 267 RLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLI 326
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+GL ++ +L EA ++FE G P + T N +VG
Sbjct: 327 NGLGSER-RLTEALQFFERSKASGFTPEAPTY----NAVVG 362
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 163/314 (51%), Gaps = 3/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + L+ CK + A + + + P V TY+ ++R L D G+L EA
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLE--RMSVAPDVVTYNTILRSLCDSGKLKEAM 228
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D L+R+C D++ + L+EA C + +A +L EMR G +PD +Y++ I+
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + L++M Y PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M K +P+ +YN +L + + DRA E E
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG YP + TY+ ++ LC K GK++ A + + +G P T + + L +G
Sbjct: 409 MVSRGCYPDIVTYNTLLTALC-KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 467
Query: 305 FLDIIEILADKMER 318
+ L ++M R
Sbjct: 468 KTEYAVELLEEMRR 481
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A C V A + D K P V TY++L+ G+ G L EA K
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 300
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M C +++ HN +L +MC G +A +L +M G P +++I I+ C
Sbjct: 301 LNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCR 360
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ VL+ M ++ VPN +YN ++ C+ +K++ A + L+ M+ RG PD +
Sbjct: 361 KRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 420
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V+ A+ ++ +++ + P TYN V+ L +VG+ + A E+ E M
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++G P + TYS ++ GL ++GK++EA K F M I P + T
Sbjct: 481 RKGLKPDIITYSTLLRGL-GREGKVDEAIKIFHDMEGLSIKPSAVT 525
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP + + L++ +CK + A +F +N + P V T++I++R + G
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +ML + C ++ N L+ +C+ + A +L +M G P++ SY+
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC+ + L+ M P++ TYN ++ LCK+ KV+ A ++L+++ +G
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + A+ L+ M ++ + PD TY+ +L+ L R G+ D A
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ ME PS TY+ ++ GLCK + + A + MV++G P +T +L
Sbjct: 509 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQ-QTSRAIDFLAYMVEKGCKPTEATYTIL 564
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 146/268 (54%), Gaps = 10/268 (3%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
+I +R L GEL E K + M+ + D++A SL+ C++G +A ++ + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
GA PD +Y++ I +C++ +I VL+ R ++ P+V TYN I+R LC + K++E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKE 226
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A ++LD ++R PD +Y ++ C+ + V A++L+ M K+ PD TYN+++
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ + GR D A + +M G P+V T+++++ +C G+ +A + M+ +G
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC-STGRWMDAERLLSDMLRKGCS 345
Query: 288 PYSSTVEML-----RNRLVGLGFLDIIE 310
P T +L R RL+G +D++E
Sbjct: 346 PSVVTFNILINFLCRKRLLGRA-IDVLE 372
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 36/333 (10%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHG 100
P V + L+RG G+ +A ++ E+LE V D++ +N L+ CK+G ID+A
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIM-EILENSGAVPDVITYNVLIGGYCKSGEIDKALE 197
Query: 101 MLREM------------------------------RSIGAE--PDAFSYSIFIHAFCEAN 128
+L M R + E PD +Y+I I A C +
Sbjct: 198 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDS 257
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ ++LD M++ P+V TYN +I +CK +++EA + L+ M G P+ ++N
Sbjct: 258 GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHN 317
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
IL C A RL++ M ++ P T+N+++ L R RA +V E M K
Sbjct: 318 IILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 377
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD- 307
G P+ +Y+ ++HG C++K K++ A +Y E+MV G P T L L G +D
Sbjct: 378 GCVPNSLSYNPLLHGFCQEK-KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDA 436
Query: 308 IIEILADKMERSTSCTIQELANAMRGKTGFRKS 340
+EIL + S + + G T K+
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 124/246 (50%), Gaps = 5/246 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A N L + + G ++E L M G PD + + I FC + R+++
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
++ VP+V TYN +I CK+ ++++A ++L+ M PD +YN IL CD +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ A+ ++ R + PD TY ++++ +A ++ + M K+G P V TY+V
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
+++G+C K+G+L+EA K+ M G P T ++ + G ++D +L+D + +
Sbjct: 284 LINGIC-KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
Query: 319 STSCTI 324
S ++
Sbjct: 343 GCSPSV 348
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC+++ + A + KH P +Y+ L+ G +
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N+LL A+CK G +D A +L ++ S G P +Y+
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNT 458
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +L+ M+R L P++ TY+ ++R L + KV+EA ++ +M
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 518
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNAI+ C + + A+ + M ++ P TY ++++ + G + A
Sbjct: 519 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEAL 578
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E+ + RGF S V+V
Sbjct: 579 ELLNELCSRGFVKKSSAEQVVV 600
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G +P + LL LCK K+ KVA + F+ K+++ P K Y++L+ G V A+
Sbjct: 168 GREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVNRNDMAQ 227
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDA 114
K +M+ +I+ +N LL +C+ + + A +L+EM G EP+
Sbjct: 228 KFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPNV 287
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
SYS+ +H + A+ + SMK + P V TY +I+ L ++++A LLDE
Sbjct: 288 TSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDE 347
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN--VMPDRHTYNMVLKLLVRV 232
M G P +YN + R +VN AL+L +M PD HTYN++L + +++
Sbjct: 348 MASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKL 407
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ D +VW M + P +++Y+++VHGLC K K EAC++F M++ G P T
Sbjct: 408 NQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNK-KWREACQFFMEMIERGFLPQKIT 466
Query: 293 VEMLRNRLV 301
E L L+
Sbjct: 467 FETLYRGLI 475
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 115/262 (43%), Gaps = 19/262 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---------HE--FTPTVKTYSI 49
M+ GI+P+I + LL+ +C+ + ++F + H+ P V +YS+
Sbjct: 233 MIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPNVTSYSV 292
Query: 50 LVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
++ + +F M ER CP + + S+++ + G +D+A +L EM S
Sbjct: 293 ILHVYSRAHKPELCLCMFRSMKERGICPT-VATYTSVIKCLASCGRLDDAESLLDEMASE 351
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN--LVPNVFTYNCIIRKLCKNEKVE 166
G P +Y+ F + D++ ++ + MK P++ TYN ++ K + +
Sbjct: 352 GVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHD 411
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
Q+ ++M E PD SY ++ CD + A + M + +P + T+ +
Sbjct: 412 TVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLY 471
Query: 227 KLLVRVGRFDRATEVWESMEKR 248
+ L++ W ++KR
Sbjct: 472 RGLIQADML----RTWRRLKKR 489
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 76/218 (34%), Gaps = 38/218 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI+P++ +LH + ++ F + K PTV TY+ +++ L G
Sbjct: 278 MHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGR 337
Query: 60 LSEARKLFDEML-ERKCP------------------------------------VDILAH 82
L +A L DEM E CP DI +
Sbjct: 338 LDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTY 397
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N LL K D + +M PD SY++ +H C+ + M
Sbjct: 398 NILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIE 457
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+P T+ + R L + + + +L + E A
Sbjct: 458 RGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEEAA 495
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 166/320 (51%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M FGI P +Y L ++++LC V A K P T++ L+RGL G+
Sbjct: 71 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD+M+ +++ + +L+ +CK + EA + EM + G P+ +Y+
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + V +++ M ++P+VFT N ++ LCK V EA+ ++D MI RG
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC R EV++A+++ M ++ + + +YN ++ ++ D+A
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TY+ ++HGLC G+L++A F MV G P T L +
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLC-HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369
Query: 300 LVGLGFLDIIEILADKMERS 319
L LD L +E S
Sbjct: 370 LCKNRHLDKAMALLKAIEGS 389
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 170/379 (44%), Gaps = 40/379 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G +P++ L++ LCK + V A F +P + TY+ L+ GL + E
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +EM++ K D+ N++++A+CK G + EAH ++ M G EP+ +Y+
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 120 FIHAFCEANDIHSVFRVLDSM-----------------------------------KRYN 144
+ C N++ +V D+M R
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L PN TYN +I LC ++++A L EM+ RG PD +Y + Y C ++ A+
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 380
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ + N PD Y +L + R G + A +++ ++ +G P+V TY++M+HGL
Sbjct: 381 ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 440
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RNRLVGLGFLDIIEILADKMER--STS 321
C K+G L EA K F M G P T ++ R L L IE+L + + R S
Sbjct: 441 C-KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499
Query: 322 CTIQELANAMRGKTGFRKS 340
+ L M G +S
Sbjct: 500 VSTTTLLVGMLSDDGLDQS 518
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 149/295 (50%), Gaps = 6/295 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M+ GI P I+ + L+HALC + KHV N+K P V +S +V L
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK--IMPNVVVFSTVVDALCKE 721
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G ++ A + D M++R D++ + +L++ C +DEA + M G P+ SY
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I+ +C+ + +L+ M L+ + TYN +I LC +++ A L EM+
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y +L Y C + A+ L+ + N+ D YN+ + + R G +
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
A +++ ++ +G P V TY++M+HGLC K+G L+EA K F M + I S++
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHGLC-KRGLLDEANKLFRKMDENDIWSNSTS 955
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 15/301 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ PS D +LL ++ K KH P V T +IL+ +
Sbjct: 572 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 631
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + ++L+ D++ + +L+ +CK M + G PD F+Y+
Sbjct: 632 LGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNS 678
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M ++PNV ++ ++ LCK + A+ ++D MI+RG
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y A++ HC R+E++ A+++ M + +P+ +YN+++ ++ R D+A
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M +G TY+ ++HGLC G+L+ A F MV G P T +L +
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLC-HVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857
Query: 300 L 300
L
Sbjct: 858 L 858
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 152/354 (42%), Gaps = 48/354 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M FGI P +Y L+ L+++ C + + A K F P V TY L+ GL
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC---- 662
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+M+ + DI +NSL+ A+C +L EM + P+ +S
Sbjct: 663 ---------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 713
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ I V+D M + + P+V TY ++ C +++EA ++ D M+ +G
Sbjct: 714 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 773
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN ++ +C ++ A+ L+ +M+ + ++ D TYN ++ L VGR A
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 833
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M G P + TY +++ LCK
Sbjct: 834 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 893
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ G+LE A F + +G+ P T ++ + L G LD L KM+ +
Sbjct: 894 CRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV I P++ ++ ALCK + +AH D K P V TY+ L+ G E
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+FD M+ + C ++ ++N L+ C+ +D+A G+L +M G D +Y+
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + M +P++ TY ++ LCKN + EA LL +
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D YN + C E+ A L + ++ + + PD TYN+++ L + G D A
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 938
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+++ M++ + S ST S L +K L E
Sbjct: 939 KLFRKMDENDIW-SNSTSSRNQKSLIYQKIMLPE 971
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+ ++ L+ + S L +M P D+ ++ ++C +D A
Sbjct: 43 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L ++ +G +PDA +++ I C I + D M PNV TY +I LCK
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ +V EA+ + EMI +G +P+ +YN+++ C E L+ M +MPD T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N V+ L + G A +V + M RG P+V TY+ ++ G C + +++ A K F+ M
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKVFDTM 281
Query: 282 V 282
V
Sbjct: 282 V 282
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA F+ ML ++ P + N LL ++ K + + R+M S G PD ++ +I
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C N + F L + + P+ T+ +IR LC K+ EA L D+MI G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C +V A + + M + + P+ TYN ++ L ++ + T
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M P V T + +V LC K+G + EA +MM+ G+ P T L
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALC-KEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 14/239 (5%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P + LL ++ K + + +M S G PD ++ +I
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC + F VL + + P+V TY ++ LCK MI +G
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKG 668
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C+ E L+ M +MP+ ++ V+ L + G A
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V + M KRG P V TY+ ++ G C + +++EA K F+ MV +G P + +L N
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRS-EMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 130/349 (37%), Gaps = 65/349 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + L LCK +H+ A + + P ++ Y+ ++ G+ GE
Sbjct: 351 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 410
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +AR LF + + ++ +N ++ +CK G + EA + EM G P+ +Y++
Sbjct: 411 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 470
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII-------------RKLCKNEK-- 164
F N+ +L+ M +V T ++ + LCK
Sbjct: 471 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSS 530
Query: 165 -------------------------------VEEAYQLLDEMIERGANPDEWSYNAILAY 193
+++A + M+ P + +L
Sbjct: 531 RPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTS 590
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
+ L L T+M + PD +T N+++ + R A V + K GF P
Sbjct: 591 IAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPD 650
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
V TY +++GLCK M+ +GI P Y+S + L N
Sbjct: 651 VVTYGTLMNGLCK--------------MITKGISPDIFTYNSLIHALCN 685
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 5/247 (2%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P +HN+ +DEA M P ++ + + +
Sbjct: 1 MLSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKH 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
++ + M + + P+V+T +I LC +V+ A+ L ++++ G PD ++
Sbjct: 61 HSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E P+ TY ++ L + + A ++ M +G
Sbjct: 121 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL--- 306
P++ TY+ ++HGLC K + + MVD I P T+ + + L G +
Sbjct: 181 ISPNIVTYNSLIHGLC-KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 239
Query: 307 -DIIEIL 312
D+++++
Sbjct: 240 HDVVDMM 246
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 165/308 (53%), Gaps = 7/308 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E ++P ++ + ++ +C+ +V A Q + + + P V TY+IL+RGL + G+
Sbjct: 222 MLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGK 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+L +M+ R C +++ ++ L+ ++C+ G ++E G+L++M+ G +PD + Y
Sbjct: 282 WEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDP 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + VLD M VP++ YN I+ LCK ++ +EA + +++ E G
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ SYN++ + AL +I M + V PD TYN ++ L R G D A
Sbjct: 402 CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAI 461
Query: 240 EVWESMEKRG--FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
E+ ME PSV +Y++++ GLCK ++ +A + MVD+G P +T L
Sbjct: 462 ELLVDMEMESSECKPSVVSYNIVLLGLCKVS-RVSDAIEVLAAMVDKGCRPNETTYTFL- 519
Query: 298 NRLVGLGF 305
+ G+GF
Sbjct: 520 --IEGIGF 525
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 158/320 (49%), Gaps = 3/320 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + L+ +LC R + A +F + K PTV TY+IL+ G + EA
Sbjct: 156 GFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEA 215
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL DEMLE D+ +NS++ MC+ G +D A ++ + S G PD +Y+I +
Sbjct: 216 MKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRG 275
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + ++ M NV TY+ +I +C++ KVEE LL +M ++G PD
Sbjct: 276 LLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPD 335
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y+ ++A C V++A+ ++ M + +PD YN +L L + R D A ++E
Sbjct: 336 GYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFE 395
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ + G P+ S+Y+ M L K+ EM+ D+G+ P T L + L
Sbjct: 396 KLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEML-DKGVDPDGITYNSLISCLCRD 454
Query: 304 GFLD-IIEILADKMERSTSC 322
G +D IE+L D S+ C
Sbjct: 455 GMVDEAIELLVDMEMESSEC 474
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 160/317 (50%), Gaps = 15/317 (4%)
Query: 7 KPSIYDLD----QLLHAL---CKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGD 56
KP + LD LL +L CK + + F N H+ P V + L+ GL
Sbjct: 47 KPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHK--PDVVLCTKLIHGLFT 104
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ +A ++ +LE D++A+N+++ C+A ID A+ +L M++ G PD +
Sbjct: 105 SKTIDKAIQVM-HILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVT 163
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I I + C + S + + + N P V TY +I ++EA +LLDEM+
Sbjct: 164 YNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEML 223
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
E PD ++YN+I+ C V+ A ++I+ ++ + PD TYN++L+ L+ G+++
Sbjct: 224 EINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWE 283
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ M RG +V TYSV++ +C + GK+EE + M +G+ P + L
Sbjct: 284 AGYELMSDMVARGCEANVVTYSVLISSVC-RDGKVEEGVGLLKDMKKKGLKPDGYCYDPL 342
Query: 297 RNRLVGLGFLDI-IEIL 312
L G +D+ IE+L
Sbjct: 343 IAALCKEGRVDLAIEVL 359
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 36/339 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
+V G KP + +L+H L K + A Q ++ P + Y+ ++ G +
Sbjct: 83 LVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRI 142
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ D M + DI+ +N L+ ++C G +D A ++ +P +Y+I
Sbjct: 143 DSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTIL 202
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A I ++LD M NL P++FTYN IIR +C+ V+ A+Q++ + +G
Sbjct: 203 IEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGY 262
Query: 181 NPDEWSYNAIL-----------------------------------AYHCDRAEVNMALR 205
PD +YN +L + C +V +
Sbjct: 263 APDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVG 322
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M K+ + PD + Y+ ++ L + GR D A EV + M G P + Y+ ++ LC
Sbjct: 323 LLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLC 382
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K+K + +EA FE + + G P +S+ + + L G
Sbjct: 383 KQK-RADEALSIFEKLGEVGCSPNASSYNSMFSALWSTG 420
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P I + + +L LCK+K A F+ + +P +Y+ + L G
Sbjct: 362 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGH 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML--REMRSIGAEPDAFSY 117
A + EML++ D + +NSL+ +C+ G +DEA +L EM S +P SY
Sbjct: 422 KVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSY 481
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL----CKNEKVEEAYQLLD 173
+I + C+ + + VL +M PN TY +I + C N+ + A L++
Sbjct: 482 NIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVN 541
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDV 57
M++ G+ P + L+ LC+ V A + + + E + P+V +Y+I++ GL V
Sbjct: 432 MLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKV 491
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+S+A ++ M+++ C + + L+E + G +++A R++ + DA S
Sbjct: 492 SRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA----RDLATTLVNMDAISE 547
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNL 145
H+F ++ F LD ++ NL
Sbjct: 548 ----HSF---ERLYKTFCKLDVYRQLNL 568
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 169/330 (51%), Gaps = 16/330 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-------TVKTYSILVRG 53
M + G P++ L+ LC+ ++K+A + N + +P +YSI++ G
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L G EAR+LF EM D++++ SL+ C++G +A + EM IG +PD
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++S+ I C+ + +L+ M + +PN TY +++ LC N+++ EA QL
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTYNMVLK 227
+M + G PD +Y ++ C + AL L +M + N PD +Y++++
Sbjct: 613 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 672
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + GR D A E+++ M+ G P+V +Y+ ++HG C+ GKLE+A F MVD+G+
Sbjct: 673 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS-GKLEDAKHLFNEMVDQGVQ 731
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ T ++ + G +D + L KME
Sbjct: 732 LNAVTYSVMIHGFCKEGQID--KALFQKME 759
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 150/301 (49%), Gaps = 14/301 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+++ G P + L+ LC + + A Q F K P V T + L++GL G
Sbjct: 398 VIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 457
Query: 60 LSEARKLFDEMLERKCPVDI------LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
+ A +L ML P I ++++ +++ +CK G DEA + +EM+++G PD
Sbjct: 458 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPD 517
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
SY+ IH FC + + + M + P+V T++ +I LCK KV EA +LL+
Sbjct: 518 VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 577
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
MI+RG P+ +Y ++ C ++ A +L +M K +PD TY ++K L + G
Sbjct: 578 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 637
Query: 234 RFDRATEVWESMEK------RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
A E+ + M F P V +YS+++ GLC K G+ +EA + F+ M G+
Sbjct: 638 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLC-KHGREDEARELFKEMKALGVI 696
Query: 288 P 288
P
Sbjct: 697 P 697
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 14/317 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA---HQFFDNAKHEF----TPTVKTYSILVRG 53
M + G +P L+ LC+ + +A HQ N ++ PT+ +YSI++ G
Sbjct: 71 MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDG 130
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L EAR+LF EM + D++++ SL+ C++G ++A + EM +G D
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+ S+ I C+ + +L+ M + + ++ TY+ +I+ LC ++ EA +L
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN------VMPDRHTYNMVLK 227
M + G PD +Y ++ C +N AL+L M + P +Y++++
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID 310
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + R D A E+++ M+ +G P V +Y+ ++HG C GK E+A F M+D GI
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS-GKWEKAKCLFNEMLDVGIQ 369
Query: 288 PYSSTVEMLRNRLVGLG 304
P +T +L + L G
Sbjct: 370 PDVTTSSVLIDMLCKKG 386
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 49/348 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G I L+ LC + + A + F K P Y L++GL G
Sbjct: 217 MIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGN 276
Query: 60 LSEARKLFDEMLER------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
++ A +L EML KC +++++ +++ +CK DEA + +EM++ G PD
Sbjct: 277 INTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPD 336
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
SY+ IH FC + + + M + P+V T + +I LCK KV EA +LL+
Sbjct: 337 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 396
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT------------ 221
+I+RG PD + ++ C + ++ A +L +M K MP+ T
Sbjct: 397 VVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 456
Query: 222 -----------------------------YNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
Y++++ L + GR D A E+++ M+ G P
Sbjct: 457 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 516
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
V +Y+ ++HG C + GK ++A F MVD G+ P +T +L + L
Sbjct: 517 DVISYTSLIHGFC-RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 7/253 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V T +L+ G++ EA +L + M++R C +DI+ +++L++ +C I EA +
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV----LDSMKRYNL--VPNVFTYNCI 155
M+ +G PDA +Y + C+ I+ + L+ +Y + P + +Y+ I
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I LCK+ + +EA +L EM +G PD SY +++ C + A L M +
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
D T +M++ +L + G+ A E+ E M +RG + TYS ++ GLC K ++ EA
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH-RISEAT 246
Query: 276 KYFEMMVDEGIPP 288
+ F M G P
Sbjct: 247 RLFMSMQKLGCRP 259
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 8/236 (3%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +G +PD + + I FC+ + +L+ M + + ++ TY+ +I+ LC +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN------VMPD 218
+ EA QL M + G PD +Y ++ C ++N+AL L M + P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+Y++++ L + R D A E+++ M+ +G P V +Y+ ++HG C + GK E+A F
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC-RSGKWEKAKCLF 179
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
M+D GI +T ML + L G ++ E+L ++R I + ++G
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 235
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 164/323 (50%), Gaps = 3/323 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++ + ++H LCK K VA + + P V ++ LV L G
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGM 299
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A + D M++R D++ + +L++ C +DEA + M G P+ SYS
Sbjct: 300 VTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYST 359
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ I + + M + LVPN+ TYN +I LC ++ +A L EM+ G
Sbjct: 360 LINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASG 419
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +L Y C ++ A+ ++ + N+ PD +YN+V+ + RVG + A
Sbjct: 420 QIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAG 479
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RN 298
+++ S+ +G +P V TY++M++GLC +G L EA K F M +G P T ++ R
Sbjct: 480 DLFSSLSSKGLHPDVWTYTIMINGLC-LQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538
Query: 299 RLVGLGFLDIIEILADKMERSTS 321
L L I++L + + R S
Sbjct: 539 FLRNNETLSAIQLLQEMLGRGFS 561
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 157/306 (51%), Gaps = 2/306 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
+ G +P L+ LC + A FD E F P TY L+ GL VG
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSR 196
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +L M+++ C +++ +N++++ + K ++EA + EM + G P+ +Y+ I
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ ++ V +++ M ++PNV + ++ LCK V A+ ++D MI+RG
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y A++ HC R+E++ A ++ M ++ P+ +Y+ ++ ++ R D+A +
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYL 376
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+E M +R P++ TY+ ++HGLC G+L +A F MV G P T +L + L
Sbjct: 377 FEEMCQRELVPNIVTYNTLIHGLC-HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435
Query: 302 GLGFLD 307
LD
Sbjct: 436 KTRHLD 441
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ C R + A + FD + P V +YS L+ G +
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQR 369
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM +R+ +I+ +N+L+ +C G + +A + EM + G PD +Y I
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + +L +++ NL P++ +YN +I +C+ ++E A L + +G
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD W+Y ++ C + + A +L M + PD TYN++ + +R A
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAI 549
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ + M RGF ST +++V L
Sbjct: 550 QLLQEMLGRGFSADASTITLIVEML 574
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA F+ ML + P ++ +L ++ + + ++M S+G D ++ +I
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N + F VL + + P+ T+ +IR LC K+ EA L D+M+ G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C A+RL+ M ++N P+ TYN ++ L + + + A
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +G P+VSTY+ ++HGLCK + + MVD I P L +
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFS-EWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293
Query: 300 LVGLGFLDIIEILADKM 316
L G + I + D M
Sbjct: 294 LCKEGMVTIAHDVVDVM 310
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+V ++ ++ + ++ S L +M P D+ ++ + C +D +
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L ++ +G +PD +++ I C I + D M PN TY +I LCK
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
A +LL M+++ P+ +YN I+ +VN AL + + M + + P+ T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + + + M P+V ++ +V LC K+G + A ++M
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALC-KEGMVTIAHDVVDVM 310
Query: 282 VDEGIPP 288
+ G+ P
Sbjct: 311 IQRGVEP 317
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + LL LCK +H+ A + P +++Y+I++ G+ VGE
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF + + D+ + ++ +C G + EA + REM + G PD +Y++
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
F N+ S ++L M + T I+ L + + Q+L E ++
Sbjct: 535 ITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
N I + M P+V + I+ + + L +M G D ++
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C V+ ++ ++ K PD T+ +++ L G+ A +++ M
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE-MLRNRLVG 302
GF P+ TY ++HGLC K G A + MV + P Y++ ++ + ++R V
Sbjct: 173 EGFQPNGVTYGTLIHGLC-KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231
Query: 303 LGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
+ + I ++ + + S + + + G F + + T
Sbjct: 232 ----EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVAT 270
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 156/289 (53%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M ++G+ P + L++ LCK + A D E P V Y+ L+ G G
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K+ EM+ + + +++L+ +CK G +D A +L++M PD +Y++
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I ++ FR+L M+ + PNV+TY+ +I LC++ + E+A LL+EM +G
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y +++ +C V++A + +MTK NV+PD + YN ++ L +VGR + +T
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M++RG P+ TYS ++HG K G LE A + + M+D G+ P
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYL-KNGDLESAEQLVQRMLDTGLKP 465
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKV---AHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G+ PSI + LL L + + + +F A +P V TYS L+ V
Sbjct: 73 MRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG--ISPDVYTYSTLIEAYCKV 130
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
E A+K+ EM ER C ++ + +N L+ +C++G ++EA G ++M G PD F+Y
Sbjct: 131 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTY 190
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ C++ + +LD M L PNV Y +I + +EA++++ EM+
Sbjct: 191 GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA 250
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P++ +Y+ ++ C +++ A L+ +M +++ PD TYN++++ R
Sbjct: 251 AGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKD 310
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A + ME G P+V TYS+M+HGLC + G+ E+A E M +G+ P
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLC-QSGEPEKASDLLEEMTTKGLKP 360
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 163/356 (45%), Gaps = 36/356 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + + P +Y + L+ L K V+ + ++F + P TYS L+ G G+
Sbjct: 388 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 447
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L ML+ + + + LLE+ K+ +I++ + M G D Y I
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 507
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + ++ + FRVL +++ VP+V Y+ +I LCK E+A+ +LDEM ++G
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ YNA++ C +++ A + + + ++P+ TY ++ +VG A
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627
Query: 240 EVWESMEKRGFYP----------------------------------SVSTYSVMVHGLC 265
++ M G P S+S+++ +V G C
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFC 687
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
K+ GK++E K +++ G+ P + T+E + + L G L + + ++++ TS
Sbjct: 688 KR-GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 742
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P+ D L+ LCK + A + P TY++++ G
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ ++ ++ +C++G ++A +L EM + G +P+AF Y+
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 367
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++ + D M + N++P+++ YN +I L K +VEE+ + +M ERG
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITR------------------------------ 209
P+E++Y+ ++ + ++ A +L+ R
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487
Query: 210 -----MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + VM D Y +++ L G + A V +EK G P V YS ++ GL
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + E+A + M +G+ P
Sbjct: 548 CKTADR-EKAFGILDEMSKKGVDP 570
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 142/295 (48%), Gaps = 6/295 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
GI P++Y ++H LC+ + A + + P Y+ L+ G G +S A
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FD+M + D+ +NSL+ + K G ++E+ +M+ G P+ F+YS IH
Sbjct: 382 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + D+ S +++ M L PN Y ++ K++ +E+ M+++G D
Sbjct: 442 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 501
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ + A R+++ + K +PD H Y+ ++ L + ++A + +
Sbjct: 502 NRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 561
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
M K+G P++ Y+ ++ GLC K G + A F ++ +G+ P Y+S ++
Sbjct: 562 EMSKKGVDPNIVCYNALIDGLC-KSGDISYARNVFNSILAKGLVPNCVTYTSLID 615
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ K+G + +A ++ MR G P + + A+ + +++V + M
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+V+TY+ +I CK + + A ++L EM ERG + +YN ++A C V A
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M ++PD TY ++ L + R + A + + M P+V Y+ ++ G
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
++G +EA K + MV G+ P T + L L +G +D +L +M R +
Sbjct: 233 -MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 118/299 (39%), Gaps = 55/299 (18%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ L+ LCK + A D +K P + Y+ L+ GL G++S A
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF--- 120
R +F+ +L + + + + SL++ CK G+I A + EM + G PDAF YS+
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651
Query: 121 -------------------------------IHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
+ FC+ + ++L + LVPN
Sbjct: 652 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 711
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDE-------------------MIERGANPDEWSYNAI 190
T II L + K+ E + + E MI +G P + + +
Sbjct: 712 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD-VVDDM 770
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ HC ++ AL L + ++ +Y ++ L R G+ A + + M+KRG
Sbjct: 771 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 169/330 (51%), Gaps = 16/330 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-------TVKTYSILVRG 53
M + G P++ L+ LC+ ++K+A + N + +P +YSI++ G
Sbjct: 589 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 648
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L G EAR+LF EM D++++ SL+ C++G +A + EM IG +PD
Sbjct: 649 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++S+ I C+ + +L+ M + +PN TY +++ LC N+++ EA QL
Sbjct: 709 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 768
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTYNMVLK 227
+M + G PD +Y ++ C + AL L +M + N PD +Y++++
Sbjct: 769 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 828
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + GR D A E+++ M+ G P+V +Y+ ++HG C+ GKLE+A F MVD+G+
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS-GKLEDAKHLFNEMVDQGVQ 887
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ T ++ + G +D + L KME
Sbjct: 888 LNAVTYSVMIHGFCKEGQID--KALFQKME 915
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 15/335 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-----DNAKH--EFTPTVKTYSILVRG 53
M + G +P L+ LC+ ++ +A Q D ++ + PT+ +YSI++ G
Sbjct: 115 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 174
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L EAR+LF EM + D++++ SL+ C +G ++A + EM +G +PD
Sbjct: 175 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPD 234
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+ + I FC+ + +L+ M + ++ TY+ +I+ LC ++ EA QL
Sbjct: 235 VTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFM 294
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-------VMPDRHTYNMVL 226
M + G PD +Y ++ C ++N+AL L M + + PD T +M++
Sbjct: 295 SMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLI 354
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+L + G+ A E+ E M +RG + TYS ++ GLC + ++ EA F M G
Sbjct: 355 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH-RISEATWLFMSMQKLGC 413
Query: 287 PPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
P + T L L G ++I L +M T
Sbjct: 414 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 17/333 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF----------DNAKHEFTPTVKTYSILVRGL 54
G+ P + + L++ LC K V D + P V T S+L+ L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G++ EA +L + M++R C +DI+ +++L++ +C I EA + M+ +G PDA
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 115 FSYSIFIHAFCEANDIHSVFRV----LDSMKRYNL--VPNVFTYNCIIRKLCKNEKVEEA 168
+Y + C+ +I+ ++ L+ RY + P + +Y+ II LCK+ + +EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L EM +G PD SY +++ C + A L M + PD T +++ +
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ G+ A E+ E M RG + TYS ++ GLC K ++ EA + F M G P
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH-RISEATQLFMSMKKLGCRP 303
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
+ L L G ++I L +M TS
Sbjct: 304 DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 336
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 157/318 (49%), Gaps = 15/318 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI+P + L+ CK V A++ + H + TYS L++GL
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE-------P 112
+SEA +LF M + C D +A+ +L++ +C+ G I+ A + +EM + ++ P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D + S+ I C+ + +L+ M + + ++ TY+ +I+ LC ++ EA L
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN------VMPDRHTYNMVL 226
M + G PD +Y ++ C +N+AL+L M + P +Y++++
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L + R D A E++E M+ +G P V +Y+ ++HG C GK E+A F M+D GI
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLS-GKWEKAKCLFNEMLDVGI 524
Query: 287 PPYSSTVEMLRNRLVGLG 304
P +T +L + L G
Sbjct: 525 QPDVTTSSVLIDMLCKKG 542
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 15/298 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+H C + A F+ P V T +L+ G++ EA
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + M+ R C +DI+ +++L++ +C I EA + M+ +G PDA +Y +
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314
Query: 124 FCEANDIHSVFRV----LDSMKRYNLV---PNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C+ I+ + L+ +Y + P+V T + +I LCK KV EA +LL+ MI
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMI 374
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG D +Y+ ++ C ++ A L M K PD TY ++K L + G +
Sbjct: 375 QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 434
Query: 237 RATEVWESM-EKRGFY-----PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A ++ + M G Y P++ +YS+++ GLCK + + +EA + FE M +GI P
Sbjct: 435 IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR-REDEARELFEEMKAQGIMP 491
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 154/348 (44%), Gaps = 49/348 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G I L+ LC + A F K P TY L++GL G
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432
Query: 60 LSEARKLFDEMLER------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
++ A +L EML KC +++++ +++ +CK DEA + EM++ G PD
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
SY+ IH FC + + + M + P+V T + +I LCK KV EA +LL+
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT------------ 221
+I+RG D + ++ C + ++ A +L +M K MP+ T
Sbjct: 553 VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612
Query: 222 -----------------------------YNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
Y++++ L + GR D A E+++ M+ G P
Sbjct: 613 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 672
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
V +Y+ ++HG C + GK ++A F MVD G+ P +T +L + L
Sbjct: 673 DVISYTSLIHGFC-RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 162/348 (46%), Gaps = 16/348 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+V + I+P + L+ LCK V A++ + + + TYS L++GL
Sbjct: 45 IVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 104
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS------IGAEPD 113
+SEA LF M + C D + + +L++ +C+ GNI+ A + +EM + I +P
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
SYSI I C+ + MK ++P+V +Y +I C + K E+A L +
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
EM++ G PD + ++ C +V A L+ M + D TY+ ++K L
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-------I 286
R AT+++ SM+K G P Y ++ GLC + GK+ A + M+++ I
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLC-QTGKINIALHLHQEMLNDTSQYGIKCI 343
Query: 287 PPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
P +T ML + L G ++ E+L ++R I + ++G
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 51/242 (21%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC---------I 155
MR G PD+F+++I I+ C ++ + + R +P++ TY+ +
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I LCK KV EA +LL+ MI+RG D +Y+ ++ C ++ A L M K
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 216 MPDRHTYNMVLKLLVRVG-----------------------------------------R 234
PD TY ++K L + G R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D A E+++ M+ +G P V +Y+ ++HG C GK E+A F M+D GI P +T
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFC-HSGKWEKAKCLFNEMLDVGIQPDVTTSG 239
Query: 295 ML 296
+L
Sbjct: 240 VL 241
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 7/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI P + + ++ LCK A +F A + TP + T++ILV L G
Sbjct: 56 MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA ++F+ M +C +++ + +++ +CK G +D A +L M G P+ +YS
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + C+A F +L M R P+V YN ++ LCK+ +++EA +L+ MI
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +YN+++ C +V+ A RLI M++ PD YN V+ L R R D A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK-----KKGKLEEACKYFEMMVDEGIPPYSST 292
+ + M P V TYS ++ GLCK KLE AC+ EMM G PP + T
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P I + L+ AL K V+ A Q F++ + P V TY+ ++ GL G+L A +
Sbjct: 98 PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D M E C +++ ++ L+E +CKAG D+ +L+EM G +PD Y+ ++ C
Sbjct: 158 LLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLC 217
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
++ + ++ M R P V TYN ++ C++++V+ A++L+ M ERG PD
Sbjct: 218 KSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD------RAT 239
+YN ++A C A ++ A L+ +M +PD TY+ ++ L + R D A
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ E M++ G P+ TY+V++ GLC+ + K ++A M+D + P S+ M+
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRAR-KSQQALALLRRMIDSEVVPDLSSFSMVIGS 396
Query: 300 L 300
L
Sbjct: 397 L 397
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TY L+ GL G+L +A +L DEM +R P + HN ++ +CKAG +A G
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKL 159
+ + PD +++I + A ++ + F++ +SM +PNV TY +I L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK+ K++ A +LLD M E G P+ +Y+ ++ C + L+ MT+ PD
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
YN +L L + R D A E+ + M + G YP+V TY+ ++ C+ K +++ A + +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK-QVDRAFRLIQ 265
Query: 280 MMVDEGIPP 288
+M + G PP
Sbjct: 266 VMSERGCPP 274
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 9/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P++ L+ LCK + F P V Y+ L+ GL
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L M+ C ++ +NSL+E C++ +D A +++ M G PD +Y+
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV------EEAYQLLD 173
I C + +L M VP+V TY+ II LCK+ +V E A ++L+
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M + G P+ +Y ++ C + AL L+ RM V+PD +++MV+ L +
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
D A +++ M +R P+ Y+ ++ GL K G++++A + FE+MV E P +T
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGL-SKGGEVDKAVRVFELMV-ESFRPGVATY 459
Query: 294 EMLRNRLVGLG 304
+ + L G+G
Sbjct: 460 NSVLDGLCGVG 470
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 147/274 (53%), Gaps = 15/274 (5%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
++LVR G+ +A +LF E +C + + SL+ +CKAG +D+A+ +L EMR
Sbjct: 6 NLLVRA----GQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
G P ++ I C+A ++ P++ T+N ++ L K+ +VEE
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 168 AYQLLDEM-IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A+Q+ + M P+ +Y ++ C +++ A+ L+ M + P+ TY++++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ L + GR D+ + + M +RGF P V Y+ +++GLCK + +L+EA + ++M+ G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR-RLDEALELVQLMIRSGC 237
Query: 287 PP----YSSTVEML-RNRLVGLGFLDIIEILADK 315
P Y+S +E+ R++ V F +I++++++
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAF-RLIQVMSER 270
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 11/293 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGL----- 54
M E G P + + + ++ LC+ + A P V TYS ++ GL
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 55 --GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
D +L A ++ + M + CP + + ++E +C+A +A +LR M P
Sbjct: 327 VDAD-WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D S+S+ I + C+++D+ + +++ M PN Y +I L K +V++A ++
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ M+E P +YN++L C + A+R++ M + PD +Y +++ L RV
Sbjct: 446 ELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRV 504
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ A E+++++E +GF V Y+V+V+ LCKKK +L +A +++ G
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK-RLSDAHGVANKLIEAG 556
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VPN FTY +I LCK K+++AY+LLDEM +RG P +N ++ C AL
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGL 264
+ PD T+N+++ LV+ GR + A +++ESM P+V TY+ +++GL
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
C K GKL+ A + ++M + G P T +L L G D L +M R
Sbjct: 147 C-KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR 199
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 155/287 (54%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP L+ CK + A + + TP + TY L+ GL GE
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L DEM ++ +++ +NS++ +CKAGNI++A +++EM G +PDA +Y+
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C DI ++L M L P V T+N ++ C +E+ +LL M+E+G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC R +N ++ RM + V PD +TYN+++K + A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+++ M ++G+ P+V++Y+ ++ KKK K+ EA + FE M G+
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKK-KILEARELFEEMRGHGL 709
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 154/293 (52%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y + ++ LCK K + + + P Y+ L+ G +G + A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K FDEML +K D + + +L++ + G + E + EM S G +PD +Y+ I
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A ++ + F + + M + + PN+ TY +I LCK+ +++ A +LLDEM ++G +
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN+++ C + A++L+ M + PD TY V+ R+G D+A ++ +
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M RG P+V T++V+++G C G LE+ + M+++GI P + T L
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFC-MLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGE 59
E+GI + + ++++LC+ VK AH+ + +F TP V +YS ++ G +GE
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLL--MQMDFRSSTPDVVSYSTVIDGYCHLGE 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A KL D+M + + +NS++ +CK G EA +LREM S PD Y+
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F + + + + D M + P+ TY +I+ + KV E L EMI RG
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +Y ++ +C E+ A L M + + P+ TY ++ L + G D A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ + M K+G +V Y+ MV+G+C K G +E+A K + M GI P + T + +
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGIC-KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 300 LVGLGFLDII-EILADKMERSTSCTIQELANAMRG 333
LG +D ++L + ++R T+ M G
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+H K HV+ A+++FD + +P TY+ L++G G G++ E + LF EM+ R
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D + + +L++ CKAG + A + EM +G P+ +Y I C+ ++ +
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+LD M++ L NV YN ++ +CK +E+A +L+ EM G +PD +Y ++ +
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +++ A +L+ M + P T+N+++ +G + + M ++G P
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
TY+ ++ C + + K ++ M ++G+ P S+T +L
Sbjct: 609 ITYNTLMKQHCIRNS-MNTTTKIYKRMRNQGVAPDSNTYNIL 649
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P+I L+ LCK + A++ D K V Y+ +V G+ G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A KL EM D + + ++++A C+ G+ID+AH +L+EM G +P ++++
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + R+L M +VP+ TYN ++++ C + ++ M +G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC + A L M ++ +P +YN ++K + + A
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
E++E M G Y+ V +C ++G +E
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFV-DMCYEEGDVE 730
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 129/273 (47%), Gaps = 4/273 (1%)
Query: 24 KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
K + H+ K+ + P + I + L ++G LSEARKL D++L V + + N
Sbjct: 171 KMTQFTHRLIYTYKY-WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCN 229
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+ L + A N + ++ G + SY+I I++ C + R+L M
Sbjct: 230 AFLSRI--ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR 287
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V +Y+ +I C ++++A +L+D+M +G P+ ++YN+I+ C + A
Sbjct: 288 SSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA 347
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+++ M + ++PD Y ++ ++G A + ++ M + P TY+ ++ G
Sbjct: 348 EKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQG 407
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ GK+ E F M+ G+ P T L
Sbjct: 408 F-GQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P ++ A C+ + AH+ PTV T+++L+ G +G L +
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG 592
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L MLE+ D + +N+L++ C +++ + + MR+ G PD+ +Y+I I
Sbjct: 593 DRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A ++ + + M VP V +YN +I++ K +K+ EA +L +EM G D
Sbjct: 653 HCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVAD 712
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
YN + + +V + L L ++ ++ +R
Sbjct: 713 GEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNER 748
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 50/363 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G +P + + L+ C+ + ++VAH F F+ +Y+ L+ G + G
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-- 117
+ EA +LF EM + D+ H +L++ +C AG +E ML++M+ +G P +Y
Sbjct: 215 IDEALELFREMTQP----DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAA 270
Query: 118 ---------------------------------SIFIHAFCEANDIHSVFRVLDSMKRYN 144
+I ++A+C + RV +SM+
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV+TYN I++ C KV +A LLD+M E G PD +YN ++ C + A
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + D++TYN+++ L + G+ D A +++ +E RG P+ T++ +++GL
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML---RNRLVGLGFLDIIEILADKME 317
C K GK + AC + E M+ G P YS +E L + GL F+D E+L ++
Sbjct: 451 C-KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFID--EMLQKDVK 507
Query: 318 RST 320
ST
Sbjct: 508 PST 510
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M + G+ P + +++A C+ + A + F++ + + P V TY+ +V+G + G+
Sbjct: 291 MFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGK 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L D+M E D++ +N L+ C G+I A +LR M G D ++Y++
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNV 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + D ++ + PN T+N +I LCK K + A L+ MI G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+ + C L I M +++V P Y +V+ L + AT
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLAT 530
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+W M +G P V TY+ V C +G+L+EA
Sbjct: 531 RIWGQMVSQGCSPDVVTYTTSVRAYC-NEGRLDEA 564
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT TY+ L+R L +L A++ M+ D NSL+ C+ ++ AH +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+M G DA SY+ I FCEA I + M + P+++T+ +++ LC
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ EE +L +M E G P +Y A++ C + A +++ M +MP T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+V+ R GR A V+ESM +G P+V TY+ +V G C GK+ +A + M
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC-NAGKVYKAMALLDQM 361
Query: 282 VDEGIPPYSSTVEML 296
+ G+ P T +L
Sbjct: 362 RECGVEPDVVTYNLL 376
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G++P + + L+ C H+ A + + + TY++L+ L G+
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD + R + + N+++ +CKAG D A L M S G PD ++YS
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP 480
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ +D M + ++ P+ Y +I +L A ++ +M+ +G
Sbjct: 481 FIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG 540
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y + +C+ ++ A ++T M K + D YN ++ +G+ DRA
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAV 600
Query: 240 EVWESMEKRGFYPSVSTYSV 259
+ + M P+ T+ +
Sbjct: 601 TILKHMTGVASMPNHFTFFI 620
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R P +Y+ I A C D+ R L M R P+ FT+N +I C+ +++
Sbjct: 121 RHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQL 180
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E A+ L +M RG + D SY A++ C+ ++ AL L MT+ PD +T+ +
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAAL 236
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+K L GR + + + M++ G+ P+ Y+ +V C+++ K EEA K M D G
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQ-KAEEAEKILNEMFDSG 295
Query: 286 IPPYSSTVEMLRN 298
+ P T ++ N
Sbjct: 296 LMPCVVTCTIVVN 308
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 120/316 (37%), Gaps = 52/316 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KPS + +++ L ++ +A + + +P V TY+ VR + G
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGR 560
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + EM + + VD +A+N+L++ G D A +L+ M + + P+ F++ I
Sbjct: 561 LDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFI 620
Query: 120 ---------------------------------------------------FIHAFCEAN 128
+ F E
Sbjct: 621 LLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEER 680
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ V ++ MK NL N YN ++ CK +A+ LL MI G P+ Y
Sbjct: 681 RLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQ 740
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+L+ + + A + + D + +++ +R G D ++ +E+
Sbjct: 741 YLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQM 800
Query: 249 GFYPSVSTYSVMVHGL 264
PS TY+++ L
Sbjct: 801 KCKPSDETYAMLTEEL 816
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 7/303 (2%)
Query: 1 MVEFG--IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDV 57
MVE G ++ S Y + L+ LCK + A++ + F YS ++ L +
Sbjct: 36 MVEAGYTLRASGYGI--LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKL 93
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ EAR+L ++M R P D L + ++E +CK ID+A + EM + G +PDAF Y
Sbjct: 94 NRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIY 152
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + C+ + + + M + + PNV TYN +I LCK ++E AY+L EM
Sbjct: 153 NFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG 212
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G P E SYN ++ C + ++ A + +M + N +P+ TY ++ L + G+
Sbjct: 213 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQA 272
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A EV + M K+G P+V+TYS ++ G CK + +++EA K E MV +GI P T +L
Sbjct: 273 AAEVLDGMVKKGVTPNVATYSCLIDGFCKVR-RVDEAHKLLEQMVTQGIAPTVVTYNILL 331
Query: 298 NRL 300
N L
Sbjct: 332 NSL 334
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 166/311 (53%), Gaps = 2/311 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P ++ LCK K + A + A P Y+ ++ GL ++ EAR L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F++M++++ +++ +N+L+ +CKA I+ A+ + +EM G P SY+ I FC+
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D+ + V D M R N VPNV TY +I L K+ KV+ A ++LD M+++G P+ +
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C V+ A +L+ +M + + P TYN++L L R + + A +++ M
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 351
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+R +P+V TY+ ++ LC K +L+ A + + M+ +G PP + T + L L G +
Sbjct: 352 QRRCHPTVVTYNTLLRALCHHK-QLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 410
Query: 307 DIIEILADKME 317
+ L +KM+
Sbjct: 411 HEAQELMEKMK 421
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 138/275 (50%), Gaps = 2/275 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P T++ + G G L + ++++ M+E + + L+ +CK GN DEA+ +
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L MR + A +YS I+ C+ N + +++ M RY P+ TY I+ +LCK
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+++++A ++EM RG PD + YN +L+ C +V A L +M K+ + P+ T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + R + A E+++ M +G+ P+ +Y+ ++ G CKKK L A F+ M
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK-DLVAAKDVFDKM 245
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
V P T L + L G + + D M
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 280
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P++ L+ L K V+ A + D K TP V TYS L+ G V
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL ++M+ + ++ +N LL ++C+A +++A + R M P +Y+
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C + R+ M P+ TY+ + L + KV EA +L+++M
Sbjct: 365 LLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424
Query: 180 ANP 182
NP
Sbjct: 425 RNP 427
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 37/191 (19%)
Query: 145 LVPNVFTYNCI-----------------------------------IRKLCKNEKVEEAY 169
++P T+N + I LCK +EAY
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+LL M + +Y+ I+ + C V A LI +M + PD TY +++ L
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-YAPPDALTYGPIVERL 124
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ R D A E M RG P Y+ ++ GLC+++ K+EEA FE MV + I P
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEE-KVEEARLLFEKMVKQRINPN 183
Query: 290 SSTVEMLRNRL 300
T L N L
Sbjct: 184 VVTYNTLINGL 194
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M V+P T+N V + GR ++ EV++ M + G+ S Y +++ LC K G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLC-KVG 59
Query: 270 KLEEACKYFEMM 281
+EA K M
Sbjct: 60 NFDEAYKLLHTM 71
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C +++ ++L++++CK + EA + EM + G P+ +Y+
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + V +++ M ++P+VFT N ++ LCK V EA+ ++D MI RG
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC R EV++A+++ M ++ + + +YN ++ ++ D+A
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TY+ ++HGLC G+L++A F MV G P T L +
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLC-HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 300 LVGLGFLDIIEILADKMERS 319
L LD L +E S
Sbjct: 430 LCKNRHLDKAMALLKAIEGS 449
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 38/356 (10%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P++ L+ +LCK + V A F +P + TY+ L+ GL + E
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +EM++ K D+ N++++A+CK G + EAH ++ M G EP+ +Y+ + C
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326
Query: 126 EANDIHSVFRVLDSM-----------------------------------KRYNLVPNVF 150
N++ +V D+M R L PN
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TYN +I LC ++++A L EM+ RG PD +Y + Y C ++ A+ L+ +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
N PD Y +L + R G + A +++ ++ +G P+V TY++M+HGLC K+G
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC-KQGL 505
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML-RNRLVGLGFLDIIEILADKMERSTSCTIQ 325
L EA K F M G P T ++ R L L IE+L + + R S +
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 8/279 (2%)
Query: 8 PSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
PS D ++LL ++ K KH + ++ Q P V T +I++ L + + A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQM---DSFGIPPDVYTLAIVINSLCHLNRVDFA 124
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L+ D +L+ +C G I EA + +M G +P+ +Y I+
Sbjct: 125 FSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLING 184
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + R+L SM++ N PNV ++ +I LCK+ +V EA+ + EMI +G +P+
Sbjct: 185 LCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPN 244
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C E L+ M +MPD T N V+ L + G A +V +
Sbjct: 245 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 304
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
M RG P+V TY+ ++ G C + +++ A K F+ MV
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKVFDTMV 342
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + L+ C R V VA + FD H + V +Y+ L+ G +
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM ++ + + +N+L+ +C G + +A + EM + G PD +Y
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ + +L +++ N P++ Y I+ +C+ ++E+A L + +G
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ W+YN ++ C + + A +L + M K P+ TYN++ + +R R
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 545
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
E+ E M RGF VST +++V G+ G L+++ K
Sbjct: 546 ELLEEMLARGFSVDVSTTTLLV-GMLSDDG-LDQSVK 580
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA F+ ML ++ P + N LL ++ K + + R+M S G PD ++ +I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C N + F L + + P+ T+ +IR LC K+ EA L D+MI G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N P+ ++ ++ L + + A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +G P++ TY+ ++HGLC K + + MVD I P T+ + +
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLC-KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 300 LVGLGFL----DIIEIL 312
L G + D+++++
Sbjct: 290 LCKEGMVAEAHDVVDMM 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P +HN+ +DEA M P ++ + + +
Sbjct: 26 MLSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKH 85
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
++ + M + + P+V+T +I LC +V+ A+ L ++++ G PD ++
Sbjct: 86 HSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTT 145
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E P+ TY ++ L +VG A + SME+
Sbjct: 146 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
P+V +S ++ LCK + ++ EA F M+ +GI P T L + L L
Sbjct: 206 CQPNVVVFSTLIDSLCKDR-QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + L LCK +H+ A + + P ++ Y+ ++ G+ GE
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +AR LF + + ++ +N ++ +CK G + EA + EM G P+ +Y++
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
F N+ +L+ M +V T ++ L + + Q+L +++
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 7/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI P + + ++ LCK A +F A + TP + T++ILV L G
Sbjct: 56 MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA ++F+ M +C +++ + +++ +CK G +D A +L M G P+ +YS
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + C+A F +L M R P+V YN ++ LCK+ +++EA +L+ MI
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +YN+++ C +V+ A RLI M++ PD YN V+ L R R D A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK-----KKGKLEEACKYFEMMVDEGIPPYSST 292
+ + M P V TYS ++ GLCK KLE AC+ EMM G PP + T
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P I + L+ AL K V+ A Q F++ + P V TY+ ++ GL G+L A +
Sbjct: 98 PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D M E C +++ ++ L+E +CKAG D+ +L+EM G +PD Y+ ++ C
Sbjct: 158 LLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLC 217
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
++ + ++ M R P V TYN ++ C++++V+ A++L+ M ERG PD
Sbjct: 218 KSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD------RAT 239
+YN ++A C A ++ A L+ +M +PD TY+ ++ L + R D A
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ E M++ G P+ TY+V++ GLC+ + K ++A M+D + P S+ M+
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRAR-KSQQALALLRRMIDSEVVPDLSSFSMVIGS 396
Query: 300 L 300
L
Sbjct: 397 L 397
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TY L+ GL G+L +A +L DEM +R P + HN +++ +CKAG +A G
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKL 159
+ + PD +++I + A ++ + F++ +SM +PNV TY +I L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK+ K++ A +LLD M E G P+ +Y+ ++ C + L+ MT+ PD
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
YN +L L + R D A E+ + M + G YP+V TY+ ++ C+ K +++ A + +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK-QVDRAFRLIQ 265
Query: 280 MMVDEGIPP 288
+M + G PP
Sbjct: 266 VMSERGCPP 274
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 9/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P++ L+ LCK + F P V Y+ L+ GL
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L M+ C ++ +NSL+E C++ +D A +++ M G PD +Y+
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV------EEAYQLLD 173
I C + +L M VP+V TY+ II LCK+ +V E A ++L+
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M + G P+ +Y ++ C + AL L+ RM V+PD +++MV+ L +
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
D A +++ M +R P+ Y+ ++ GL K G++++A + FE+MV E P +T
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGL-SKGGEVDKAVRVFELMV-ESFRPGVATY 459
Query: 294 EMLRNRLVGLG 304
+ + L G+G
Sbjct: 460 NSVLDGLCGVG 470
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 147/274 (53%), Gaps = 15/274 (5%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
++LVR G+ +A +LF E +C + + SL+ +CKAG +D+A+ +L EMR
Sbjct: 6 NLLVRA----GQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
G P ++ I C+A ++ P++ T+N ++ L K+ +VEE
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 168 AYQLLDEM-IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A+Q+ + M P+ +Y ++ C +++ A+ L+ M + P+ TY++++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ L + GR D+ + + M +RGF P V Y+ +++GLCK + +L+EA + ++M+ G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR-RLDEALELVQLMIRSGC 237
Query: 287 PP----YSSTVEML-RNRLVGLGFLDIIEILADK 315
P Y+S +E+ R++ V F +I++++++
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAF-RLIQVMSER 270
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 11/293 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGL----- 54
M E G P + + + ++ LC+ + A P V TYS ++ GL
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 55 --GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
D +L A ++ + M + CP + + ++E +C+A +A +LR M P
Sbjct: 327 VDAD-WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D S+S+ I + C+++D+ + +++ M PN Y +I L K +V++A ++
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ M+E P +YN++L C + A+R++ M + PD +Y +++ L RV
Sbjct: 446 ELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRV 504
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ A E+++++E +GF V Y+V+V+ LCKKK +L +A +++ G
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK-RLSDAHGVANKLIEAG 556
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VPN FTY +I LCK K+++AY+LLDEM +RG P +N ++ C AL
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGL 264
+ PD T+N+++ LV+ GR + A +++ESM P+V TY+ +++GL
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
C K GKL+ A + ++M + G P T +L L G D L +M R
Sbjct: 147 C-KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR 199
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C +++ ++L++++CK + EA + EM + G P+ +Y+
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + V +++ M ++P+VFT N ++ LCK V EA+ ++D MI RG
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC R EV++A+++ M ++ + + +YN ++ ++ D+A
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TY+ ++HGLC G+L++A F MV G P T L +
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLC-HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 300 LVGLGFLDIIEILADKMERS 319
L LD L +E S
Sbjct: 430 LCKNRHLDKAMALLKAIEGS 449
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 167/373 (44%), Gaps = 40/373 (10%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P++ L+ +LCK + V A F +P + TY+ L+ GL + E
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +EM++ K D+ N++++A+CK G + EAH ++ M G EP+ +Y+ + C
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326
Query: 126 EANDIHSVFRVLDSM-----------------------------------KRYNLVPNVF 150
N++ +V D+M R L PN
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TYN +I LC ++++A L EM+ RG PD +Y + Y C ++ A+ L+ +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
N PD Y +L + R G + A +++ ++ +G P+V TY++M+HGLC K+G
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC-KQGL 505
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML-RNRLVGLGFLDIIEILADKMER--STSCTIQEL 327
L EA K F M G P T ++ R L L IE+L + + R S + L
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565
Query: 328 ANAMRGKTGFRKS 340
M G +S
Sbjct: 566 LVGMLSDDGLDQS 578
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 8/279 (2%)
Query: 8 PSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
PS D ++LL ++ K KH + ++ Q P V T +I++ L + + A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQM---DSFGIPPDVYTLAIVINSLCHLNRVDFA 124
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L+ D +L+ +C G I EA + +M G +P+ +Y I+
Sbjct: 125 FSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLING 184
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + R+L SM++ N PNV ++ +I LCK+ +V EA+ + EMI +G +P+
Sbjct: 185 LCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPN 244
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C E L+ M +MPD T N V+ L + G A +V +
Sbjct: 245 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 304
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
M RG P+V TY+ ++ G C + +++ A K F+ MV
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKVFDTMV 342
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 141/285 (49%), Gaps = 8/285 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + L+ C R V VA + FD H + V +Y+ L+ G +
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM ++ + + +N+L+ +C G + +A + EM + G PD +Y
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ + +L +++ N P++ Y I+ +C+ ++E+A L + +G
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ W+YN ++ C + + A +L + M K P+ TYN++ + +R R
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 545
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA-----CKYFE 279
E+ E M RGF VST +++V G+ G L+++ CKY +
Sbjct: 546 ELLEEMLARGFSVDVSTTTLLV-GMLSDDG-LDQSVKQILCKYVQ 588
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA F+ ML ++ P + N LL ++ K + + R+M S G PD ++ +I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C N + F L + + P+ T+ +IR LC K+ EA L D+MI G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N P+ ++ ++ L + + A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +G P++ TY+ ++HGLC K + + MVD I P T+ + +
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLC-KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 300 LVGLGFL----DIIEIL 312
L G + D+++++
Sbjct: 290 LCKEGMVAEAHDVVDMM 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P +HN+ +DEA M P ++ + + +
Sbjct: 26 MLSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKH 85
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
++ + M + + P+V+T +I LC +V+ A+ L ++++ G PD ++
Sbjct: 86 HSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTT 145
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E P+ TY ++ L +VG A + SME+
Sbjct: 146 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
P+V +S ++ LCK + ++ EA F M+ +GI P T L + L L
Sbjct: 206 CQPNVVVFSTLIDSLCKDR-QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 167/328 (50%), Gaps = 7/328 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA---KHEFT--PTVKTYSILVRGLG 55
M+ G +P + L+ LCK + A+ + A KH T P V TY+ L+ GL
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197
Query: 56 DVGELSEARKLFD-EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G + EAR++FD E +ER D + + S+++ +CK G ++E EMR+ G EPDA
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+Y+ I F +A I RV M + V + TYN I+ LCK +V EAY
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M ERG +Y+A++ C V+ A+ L RM P+ +YN++++ L R G+
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
+A +E + +R P V T++ +HGLC++ + + + FE MV +G P +
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437
Query: 295 MLRNRLVGLGFLDI-IEILADKMERSTS 321
+L + + G L++ +EI + + R +
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVA 465
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
G +P L+ K K + AH+ + T + TY+I++ GL G ++EA
Sbjct: 252 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 311
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F M ER C ++ +++L++ C GN+ A + R M G EP+ SY+I I
Sbjct: 312 YATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 371
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN-EKVEEAYQLLDEMIERGANP 182
C A + + + + + L P+V+T+N + LC+ + V + +L + M+ +G +P
Sbjct: 372 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSP 431
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ SY+ ++ C + +AL + M V PD +N +++ L GR D A EV+
Sbjct: 432 NLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTVEML 296
+E+R P +Y ++ GL + + ++EEA M +G P Y TV L
Sbjct: 492 RELERRS-APDAWSYWSLLDGLSRCE-RMEEARLLSFHMKLQGCAPRHYDLTVRFL 545
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 7/303 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + +++ LC+ K + A + A + P TY++ + GL + +A +L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M E+KC + + +L++ + KAG +DEA +L +M G P +Y++ I +
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER----GANP 182
A + R+ M P+ F Y +I+ LCK+ K EEAY L E R A P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 183 DEWSYNAILAYHCDRAEVNMALRLI-TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
D +Y +++ C + A ++ + +PD TY ++ L ++GR + E
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M RG+ P TY+ ++ G K K + +A + + M+ G + T ++ + L
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAK-MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303
Query: 302 GLG 304
G
Sbjct: 304 KAG 306
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 8/262 (3%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P + +++++ GL L EA + + + C D + +N ++ +CKA +D+A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L++M P +Y+ + +A + VL+ M P + TY +I L
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI----TRMTKENVM 216
K +VEEA ++ +M+ G PD + Y A++ C + A L R +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVW--ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD TY ++ L + GR A +V+ E++E RGF P TY+ ++ GLC K G++EE
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVE-RGFIPDAVTYTSIIDGLC-KLGRVEEG 241
Query: 275 CKYFEMMVDEGIPPYSSTVEML 296
C+ F M + G P + T L
Sbjct: 242 CERFHEMRNRGYEPDAVTYAAL 263
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D++A ++ +C+ +DEA +L G EPD +Y++FI C+A + F
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++L M +P TY ++ L K +++EA +L++M+E+G +P +Y ++
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY--- 251
V A R+ M PD Y ++K L + G+ + A +++ R +
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 252 -PSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEMLRNRLVGLG 304
P V TY+ ++ GLC K G++ EA + F + V+ G P + T + + L LG
Sbjct: 183 VPDVVTYTSLIDGLC-KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLG 236
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP L+ AL K V A + D K P V TY+ L+ G G VG+L EA
Sbjct: 214 GRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEA 273
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L DEM C D++ ++ L+ + KA +DEA +L++M G PD +Y+ I+
Sbjct: 274 YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A ++ R+ D MK P+V TY+ +I L K +VE A L +EM G PD
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y +I+ +V+ A RL + M + + PD TYN L L R GRF A +++E
Sbjct: 394 LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFE 453
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M++ G P V+TY ++ GL K K ++++AC + ++++G
Sbjct: 454 DMKESGLLPDVATYDALLLGLSKTK-EVDDACGLLKELIEQG 494
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 165/350 (47%), Gaps = 36/350 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ + LL+AL K + A F+ K ++TP V +YS L+ LG G+ A ++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
EM + C ++ +N+L++ + KAG DEA +L EMR G PD +Y+ I +
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A + F + M+ VP+ FTYN +I L K + ++A +LL+EM G PD +
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y++++ E A +L M + PD T+ ++ L + GR D A E+ + M+
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 247 KRGFYPSVSTYSVMVHGL--------------------CK--------------KKGKLE 272
+RG P V TY+ ++ G CK K +L+
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
EAC+ + M EG PP + T L N L G L+ L D+M +S C
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM-KSKGC 355
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G KP+++ + L+ L K A + + + P V+TY+ L+ LG G LSEA
Sbjct: 74 GCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEA 133
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF EM ER C D +NSL+ + K G +A +L EM G PD +YS I
Sbjct: 134 FTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITG 193
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F++ MKR P+ T+ ++ L K +V++A +LLDEM ERG P
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++A ++ A L+ M + PD TY+ ++ L++ + D A +V +
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
MEK G P TY+ +++GL K G L +A + F+ M +G P YS+ + L
Sbjct: 314 KMEKEGCPPDTITYNTLINGL-GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 160/339 (47%), Gaps = 40/339 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G P + + L++ L K + A + + +H P V TYS L+ GLG GE
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KLF EM R D + +L++A+ KAG +D+A +L EM+ G +P +Y+
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL------- 172
I F + D+ + +LD MKR P+V TY+C+I L K +++EA Q+L
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 173 ----------------------------DEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
D M +G NPD +Y+ ++ A V A
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + PD TY ++ +L + G+ D A ++ M +G P V TY+ ++ L
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ G+ +EA K FE M + G+ P +T + L L+GL
Sbjct: 440 -GRGGRFKEARKIFEDMKESGLLPDVATYDAL---LLGL 474
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 3/330 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGELSEA 63
G KP + L+ L K + A Q + E P TY+ L+ GLG G L++A
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFD M + C D++ +++L+ A+ KA ++ A + EM S+G +PD F+Y I
Sbjct: 344 GRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITV 403
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A + R+ M+ L P+V TYN + L + + +EA ++ ++M E G PD
Sbjct: 404 LGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPD 463
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+A+L EV+ A L+ + ++ D ++ L++L G D A E+ +
Sbjct: 464 VATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQ 523
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+G +P S+Y+ ++ L K G++ EA E + ++G P + L + L
Sbjct: 524 FANSKGLWPGASSYNALIDALA-KAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582
Query: 304 GFLDI-IEILADKMERSTSCTIQELANAMR 332
G +D E+L + +R + + +N +R
Sbjct: 583 GQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 159/301 (52%), Gaps = 15/301 (4%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P V TY+ L+ L G+ EA+ LF+E+ K D+++++ L+ ++ +AG + A
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
++ EM++ G +P+ ++Y+ + +A R+L M+ VP+V TYNC+I L
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++ EA+ L EM ERG PD ++YN+++ A+ L+ M + PD
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY+ ++ L + G +A ++++ M++RG P T++ ++ L K G++++A + +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL-GKAGRVDDALELLDE 244
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEI--LADKMERST--------SCTIQELAN 329
M + G+ P T L + G G + D++E L D+M+R+ SC I L
Sbjct: 245 MKERGVKPGVVTYNAL---IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Query: 330 A 330
A
Sbjct: 302 A 302
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 134/296 (45%), Gaps = 36/296 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G P + L++ L K + A + FD K + P V TYS L+ LG + A
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESA 378
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF+EM D+ + S++ + KAG +D+A + EMR G PD +Y+ F+++
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---- 179
++ + MK L+P+V TY+ ++ L K ++V++A LL E+IE+G
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498
Query: 180 --------------ANPDE-------------W----SYNAILAYHCDRAEVNMALRLIT 208
N DE W SYNA++ V+ A +
Sbjct: 499 SLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLE 558
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ ++ PD +Y+ ++ L + G+ D A E+ E M KRG S +YS +V L
Sbjct: 559 DLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 2/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M GI+P ++ ++ L K V A + F + + +P V TY+ + LG G
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EARK+F++M E D+ +++LL + K +D+A G+L+E+ G D+ +
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ ++ +L L P +YN +I L K +V EA+ L+++ E+G
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-MPDRHTYNMVLKL 228
PD SY+++++ +++ A L+ M+K + + R N+V KL
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 165/311 (53%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ + L+ CK ++V A + F + + P V TY+IL+ GL G+
Sbjct: 219 MVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGK 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L D+M+ +++ HN L+ CK ++EA + +M G +P+A +Y+
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ + F + + M + P V TYNC+I LC+ V+ A L++EM+ +
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN ++ C + E A++L+ M ++ + P TYN ++ R G A
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V ME++G +V T++V++ G C KG+LE+A M++ G+ P +T E+++
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKGFC-LKGRLEDANGLLNEMLERGLVPNRTTYEIIKEE 517
Query: 300 LVGLGFLDIIE 310
++ GF+ IE
Sbjct: 518 MMEKGFVPDIE 528
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 159/306 (51%), Gaps = 5/306 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
++G K S+ + LL L K ++ + + + K + V +++I+V GL VG+L+
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE---AHGMLREMRSIGAEPDAFSYS 118
A + ++M +++ +N+L++ CK G I + A +L+EM + G P+ +Y+
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I FC+ ++ RV M+R L PNV TYN +I LC + KV+EA L D+M+
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ ++N ++ C VN A+ L M K+ V P+ TY ++ + GR + A
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M RG +P VSTY+ ++ GLC +KG ++ A MV + + T +L +
Sbjct: 353 FALYNMMIDRGIFPEVSTYNCLIAGLC-RKGDVKAARSLMNEMVSKKLSADVVTYNILID 411
Query: 299 RLVGLG 304
L G
Sbjct: 412 SLCKKG 417
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 148/287 (51%), Gaps = 5/287 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
D L+ A + + + F A + F ++ + + L+ GL E + ++ EM++
Sbjct: 89 DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
RK +++++ N ++ +CK G ++ A ++ +M+ G P+ +Y+ I +C+ I
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208
Query: 133 VFR---VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+++ +L M + PN TYN +I CK+E V A ++ EM +G P+ +YN
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C +V+ A+ L +M ++ P+ T+N+++ + + A ++ MEK+G
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P+ TY+ ++ CK G++E+A + MM+D GI P ST L
Sbjct: 329 VDPNAMTYTTLIDAYCKD-GRMEDAFALYNMMIDRGIFPEVSTYNCL 374
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 44/341 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ + LLH LC+ + V A D TP V TY L+ GL VG
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + +M+++ D++ +N L+ +CKA +DE+ +LR S G +PD +YS
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C +N + R+L +K P+V Y+ +I LCK KV+EA+ L + M G
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +Y+ ++ C V+ A L+ RM + P TYN ++K L + D A
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E+ E ME+ PS TY++++HG+C+
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSS 551
Query: 267 ------KKGKLEEACKYFEMMVDEGIPP----YSSTVEMLR 297
K G++ EA YF+ M+D G+ P YS +E L+
Sbjct: 552 LIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLK 592
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 13/308 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G +P++ + L+ LCK A + F++ K E +P++ TY+ L+ GL G+
Sbjct: 105 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 164
Query: 60 LSEARKLFDEMLER-------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L A LF EML+R +C +++ ++ L++ +CKA + +A +L M++ G P
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +Y+I + C+ + + + + VL M VPN+ TYN ++ LC+ +V +A L+
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+M RG P+ +Y ++ C V A ++ M + PD YNM++ L +
Sbjct: 285 RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA 344
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP---- 288
+ D + + G P V TYS +++GLC+ +L+EAC+ + G PP
Sbjct: 345 DQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN-RLDEACRLLLYVKSRGCPPDVIL 403
Query: 289 YSSTVEML 296
YS+ ++ L
Sbjct: 404 YSTLIDGL 411
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 2/314 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
P++ L+ LCK V A + ++ K +P V TY+ILV GL +++ A +
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ EML+ C +++ +NSLL +C+A + +A ++R+M G P+ +Y I C
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + +L M P++ YN +I LCK ++V+E+ LL + G PD
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y++++ C ++ A RL+ + PD Y+ ++ L + G+ D A +++E M
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
G V TYS ++ GLCK G+++EA MV G PP + T L L L
Sbjct: 428 AGDGCDADVVTYSTLIDGLCKA-GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 306 LDIIEILADKMERS 319
LD L ++MERS
Sbjct: 487 LDEAIELVEEMERS 500
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 145/337 (43%), Gaps = 44/337 (13%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P +Y LL C+ + A + FD + + P V SIL+ GL +A +
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F M D + + +LL + K +D+A +L EMR G EP+ +Y+ I C
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 126 EANDIHSVFRVLDSMKR---------YNLV------------------------------ 146
+ N+ + + MK YN +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 147 ---PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
PNV TY+ +I LCK +V +A +LL+ M RG +PD +Y ++ C ++V A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++ M +P+ TYN +L L R R A + M RG P+V TY ++ G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
LC K G++++AC M+D+G P ML N L
Sbjct: 306 LC-KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 6/274 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P + + L++ LCK V + A P V TYS ++ GL
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 381
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L + R CP D++ +++L++ +CKAG +DEA + M G + D +YS
Sbjct: 382 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYST 441
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + +L M R P+ TYN +I+ LC ++EA +L++EM
Sbjct: 442 LIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSN 501
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP-----DRHTYNMVLKLLVRVGR 234
P +YN ++ C V+ A+ L+ + V D Y+ ++ L + GR
Sbjct: 502 CAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGR 561
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
A + ++ M G P TYS+++ GL K K
Sbjct: 562 VAEALDYFQEMIDNGVIPDHITYSILLEGLKKSK 595
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 8/233 (3%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D+ + +LL C+ G ID+A EMRS P+ F SI I C+A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R +M+ +V + Y ++ L K +++++A +L EM + G P+ +YN+++
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY--- 251
C E + A L M P TYN +L L R G+ +RA +++ M R +
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 252 ----PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
P+V TYSV++ GLCK ++ +A + E M G P T +L + L
Sbjct: 185 DRCSPNVITYSVLIDGLCKAN-RVSQAVELLESMKARGCSPDVITYTILVDGL 236
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G PS + L+ LC H+ A + + + P+ TY+IL+ G+ +
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521
Query: 60 LSEARKLFDEMLER-----KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
+ A L ++ R +D +A++SL++ +CKAG + EA +EM G PD
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581
Query: 115 FSYSIFIHAFCEANDIHSV-FRVLDSM 140
+YSI + ++ D+H + VLD M
Sbjct: 582 ITYSILLEGLKKSKDLHELRHLVLDQM 608
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 159/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 126 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C D++ + S+++++CK + EA + +M G PD F+Y+
Sbjct: 186 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HA C + V +L+ M ++P+V ++ ++ LCK KV EA++++D MI+RG
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC ++E++ A+++ M ++ PD +Y ++ ++ + D+A
Sbjct: 306 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 365
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ + P TY+ +++GLC G+L++A F MV G P T +L +
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLC-HVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 424
Query: 300 L 300
L
Sbjct: 425 L 425
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 165/325 (50%), Gaps = 7/325 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC---KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
MV GI P I+ L+HALC + KHV N+K P V +S +V L
Sbjct: 231 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK--ILPDVVIFSTVVDALCKE 288
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+++EA ++ D M++R D++ + +L++ C +DEA + M G PD SY
Sbjct: 289 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 348
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + I + + M R +P+ TYN ++ LC ++++A L EM+
Sbjct: 349 TTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVA 408
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD +Y+ +L C + A+ L+ + N+ PD YN+++ + R G +
Sbjct: 409 RGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 468
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML- 296
A +++ ++ +G +PSV TY++M+HGLC K+G L EA K F M P T +
Sbjct: 469 ARDLFSNLSSKGLHPSVWTYNIMIHGLC-KRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 527
Query: 297 RNRLVGLGFLDIIEILADKMERSTS 321
R L L I++L + + R S
Sbjct: 528 RGFLQNNETLRAIQLLEEMLARGFS 552
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL ++ K KH P V T +IL+ + + A +
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D +L+ +C G I EA + +M G +P+ +Y I+ C+
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + R+L SM++ N P+V Y II LCK+ +V EA+ L +M+ +G +PD ++
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C+ E L+ +M ++PD ++ V+ L + G+ A E+ + M
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+RG P V TY+ ++ G C + +++EA K F+MMV +G P
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQS-EMDEAVKVFDMMVRKGFAP 343
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P + L++ CK + A F+ + E+ P KTY+ L+ GL VG
Sbjct: 336 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR 395
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF EM+ R D++ ++ LL+++CK +++EA +L+ + + PD Y+I
Sbjct: 396 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNI 455
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A ++ + + ++ L P+V+TYN +I LCK + EA +L EM
Sbjct: 456 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+PD +YN I E A++L+ M D
Sbjct: 516 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 34/263 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ +L P I+ LL ++ K + + +M S G P+ ++ +I
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N + F VL + + P+ T+ +IR LC K+ EA L D+MI+ G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N PD Y ++ L + + A
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G P + TY+ +VH LC
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285
Query: 267 -KKGKLEEACKYFEMMVDEGIPP 288
K+GK+ EA + +MM+ G+ P
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEP 308
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 5/233 (2%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P + N+ +D+A + + P ++ + + +
Sbjct: 21 MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 80
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+V + M + + PNV+T N +I C +V A+ +L ++++ G PD ++
Sbjct: 81 YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 140
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E P+ TY ++ L +VG A + SME+
Sbjct: 141 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 200
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
P V Y+ ++ LCK + ++ EA F MV +GI P Y+S V L N
Sbjct: 201 CQPDVVIYTSIIDSLCKDR-QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 252
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P I + ++ +C+ ++ A F N + P+V TY+I++ GL G L+EA
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
KLF EM C D +N++ + A +L EM + G D+
Sbjct: 506 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M ++G+ P + L++ LCK + A D E P V Y+ L+ G G
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K+ EM+ + + +++L+ +CK G +D A +L++M PD +Y++
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + FR+L M+ + PNV+TY+ +I LC++ + E+A LL+EM +G
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y +++ +C V++A + +MTK NV+PD + YN ++ L +VGR + +T
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M++RG P+ TYS ++HG K G LE A + + M+D G+ P
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYL-KNGDLESAEQLVQRMLDTGLKP 592
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 151/291 (51%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKV---AHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G+ PSI + LL L + + + +F A +P V TYS L+ V
Sbjct: 200 MRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG--ISPDVYTYSTLIEAYCKV 257
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
E A+K+ EM ER C ++ + +N L+ +C++G ++EA G ++M G PD F+Y
Sbjct: 258 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTY 317
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ C++ + +LD M L PNV Y +I + +EA++++ EM+
Sbjct: 318 GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA 377
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P++ +Y+ ++ C +++ A L+ +M +++ PD TYN++++ R
Sbjct: 378 AGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKD 437
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A + ME G P+V TYS+M+HGLC + G+ E+A E M +G+ P
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLC-QSGEPEKASDLLEEMTTKGLKP 487
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 37/327 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G+KP+ + L+ C+ +V +A + FD K P + Y+ L+ GL VG
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP------- 112
+ E+ K F +M ER + ++ L+ K G+++ A +++ M G +P
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599
Query: 113 ----------------------------DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
D Y I IH + ++ + FRVL +++
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
VP+V Y+ +I LCK E+A+ +LDEM ++G +P+ YNA++ C +++ A
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ + + ++P+ TY ++ +VG A ++ M G P YSV+ G
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG- 778
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSS 291
C G LE+A E M G SS
Sbjct: 779 CSSAGDLEQAMFLIEEMFLRGHASISS 805
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P+ D L+ LCK + A + P TY++++ G
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 434
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ ++ ++ +C++G ++A +L EM + G +P+AF Y+
Sbjct: 435 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 494
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++ + D M + N++P+++ YN +I L K +VEE+ + +M ERG
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITR------------------------------ 209
P+E++Y+ ++ + ++ A +L+ R
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614
Query: 210 -----MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + VM D Y +++ L G + A V +EK G P V YS ++ GL
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + E+A + M +G+ P
Sbjct: 675 CKTADR-EKAFGILDEMSKKGVDP 697
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 143/299 (47%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M GI P++Y ++H LC+ + A + + P Y+ L+ G G
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 504
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A ++FD+M + D+ +NSL+ + K G ++E+ +M+ G P+ F+YS
Sbjct: 505 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 564
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + + D+ S +++ M L PN Y ++ K++ +E+ M+++G
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y ++ + A R+++ + K +PD H Y+ ++ L + ++A
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ + M K+G P++ Y+ ++ GLC K G + A F ++ +G+ P Y+S ++
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLC-KSGDISYARNVFNSILAKGLVPNCVTYTSLID 742
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 147/333 (44%), Gaps = 25/333 (7%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ L+ LCK + A D +K P + Y+ L+ GL G++S A
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R +F+ +L + + + + SL++ CK G+I A + EM + G PDAF YS+
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
A D+ +++ M ++ ++N ++ CK K++E +LL ++ RG P+
Sbjct: 779 CSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 837
Query: 184 EWSYNAILAYHCDR---AEVNMALRLITRMTKENVMPDRHTYNMVLKLL----------- 229
+ I++ + +EV+ + + T E+ RH ++ + ++
Sbjct: 838 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA--RHFSSLFMDMINQGKIPLDVVD 895
Query: 230 ------VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+ G D+A + + + + S+Y +V LC+K GKL EA + M
Sbjct: 896 DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK-GKLSEALNLLKEMDK 954
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
GI P + +L L G++ + D M
Sbjct: 955 RGICPSENQCLILLTNLHTSGYIQEHNTVLDNM 987
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ K+G + +A ++ MR G P + + A+ + +++V + M
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+V+TY+ +I CK + + A ++L EM ERG + +YN ++A C V A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M ++PD TY ++ L + R + A + + M P+V Y+ ++ G
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
++G +EA K + MV G+ P T + L L +G +D +L +M R +
Sbjct: 360 -MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 162/303 (53%), Gaps = 2/303 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+IY L ++ C+ + V + K PT+ T++ L+ GL VGE ++A
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFD+M+ + C D+ +N+++ +CK G A G+L++M G +P+ +YS I +
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C ++ + MK + P++FTY +I+ LCK + +EA LL+EM PD
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ C +V+ AL ++ MT+ V P+ TY+ ++ A +++
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P++ +Y+++++G CK K +++EA + F M+ +G+ P + + L + L
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAK-RIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421
Query: 304 GFL 306
G L
Sbjct: 422 GKL 424
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G +P++ L+ +LC+ + V A F K + +P + TY+ L++GL
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM DI+ N L++ CK G + EA G+L+ M +G EP+ +YS
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + D+ ++ M PN+F+YN +I CK ++++EA QL +EMI +G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN ++ C ++ A L M +PD TY+++L + G +A
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +M+ P++ Y+++VH +C K G ++A K F + +G+ P+ + N
Sbjct: 464 RLFRAMQSTYLKPNLVMYTILVHAMC-KSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 523 LCKEGLLD 530
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 158/307 (51%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G++P+I L++ LCK A + FD+ P V TY+ ++ GL +GE
Sbjct: 154 VIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE 213
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M E C +++ +++L++++C+ ++EA + M++ G PD F+Y+
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + +L+ M N++P++ T+N ++ CK KV EA +L M E G
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y++++ + +V A +L M + P+ +YN+++ + R D A
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G P+ +Y+ ++HG C + GKL EA F M G P T +L +
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFC-QLGKLREAQDLFRNMCTNGNLPDLFTYSILLDG 452
Query: 300 LVGLGFL 306
G+L
Sbjct: 453 FCKQGYL 459
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M I P I + L+ CK V A + P V TYS L+ G +
Sbjct: 294 MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTD 353
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLF M+ + C +I ++N L+ CKA IDEA + EM G P+ SY+
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH FC+ + + +M +P++FTY+ ++ CK + +A++L M
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ C A +L + + + + P Y ++ L + G D A
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E + +ME G P +Y+V++ GL + K
Sbjct: 534 EAFRNMEADGCPPDEISYNVIIRGLLQHK 562
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 1/255 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P++ L++ V A + F P + +Y+IL+ G
Sbjct: 329 MTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR 388
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF+EM+ + + +++N+L+ C+ G + EA + R M + G PD F+YSI
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + FR+ +M+ L PN+ Y ++ +CK+ ++A +L E+ +G
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P Y I+ C ++ AL M + PD +YN++++ L++ RA
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 568
Query: 240 EVWESMEKRGFYPSV 254
+ M RGF V
Sbjct: 569 LLVGEMRDRGFIADV 583
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 2/238 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-DEAHGMLREMRSIGAEPDAFSYS 118
+ +A F+ ML RK I+ LL A+ K G D + ++M +G P+ ++ S
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IF++ FC+ + F VL + + L P + T+ +I LCK + +A +L D+M+ +
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++YN I+ C E A L+ +M + P+ TY+ ++ L R + A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M+ +G P + TY+ ++ GLCK + +EA M I P T +L
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFS-RWKEASALLNEMTSLNIMPDIVTFNVL 309
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M ++G+ P + L++ LCK + A D E P V Y+ L+ G G
Sbjct: 283 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 342
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K+ EM+ + + +++L+ +CK G +D A +L++M PD +Y++
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + FR+L M+ + PNV+TY+ +I LC++ + E+A LL+EM +G
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y +++ +C V++A + +MTK NV+PD + YN ++ L +VGR + +T
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M++RG P+ TYS ++HG K G LE A + + M+D G+ P
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHGYL-KNGDLESAEQLVQRMLDTGLKP 570
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 126/232 (54%), Gaps = 1/232 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
V E A+K+ EM ER C ++ + +N L+ +C++G ++EA G ++M G PD F+
Sbjct: 235 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 294
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I+ C++ + +LD M L PNV Y +I + +EA++++ EM+
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P++ +Y+ ++ C +++ A L+ +M +++ PD TYN++++ R
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A + ME G P+V TYS+M+HGLC + G+ E+A E M +G+ P
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLC-QSGEPEKASDLLEEMTTKGLKP 465
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 37/327 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G+KP+ + L+ C+ +V +A + FD K P + Y+ L+ GL VG
Sbjct: 458 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 517
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP------- 112
+ E+ K F +M ER + ++ L+ K G+++ A +++ M G +P
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577
Query: 113 ----------------------------DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
D Y I IH + ++ + FRVL +++
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
VP+V Y+ +I LCK E+A+ +LDEM ++G +P+ YNA++ C +++ A
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ + + ++P+ TY ++ +VG A ++ M G P YSV+ G
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG- 756
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSS 291
C G LE+A E M G SS
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRGHASISS 783
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P+ D L+ LCK + A + P TY++++ G
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ ++ ++ +C++G ++A +L EM + G +P+AF Y+
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++ + D M + N++P+++ YN +I L K +VEE+ + +M ERG
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITR------------------------------ 209
P+E++Y+ ++ + ++ A +L+ R
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592
Query: 210 -----MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + VM D Y +++ L G + A V +EK G P V YS ++ GL
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + E+A + M +G+ P
Sbjct: 653 CKTADR-EKAFGILDEMSKKGVDP 675
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 142/295 (48%), Gaps = 6/295 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
GI P++Y ++H LC+ + A + + P Y+ L+ G G +S A
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FD+M + D+ +NSL+ + K G ++E+ +M+ G P+ F+YS IH
Sbjct: 487 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 546
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + D+ S +++ M L PN Y ++ K++ +E+ M+++G D
Sbjct: 547 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 606
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ + A R+++ + K +PD H Y+ ++ L + ++A + +
Sbjct: 607 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 666
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
M K+G P++ Y+ ++ GLC K G + A F ++ +G+ P Y+S ++
Sbjct: 667 EMSKKGVDPNIVCYNALIDGLC-KSGDISYARNVFNSILAKGLVPNCVTYTSLID 720
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 118/299 (39%), Gaps = 55/299 (18%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ L+ LCK + A D +K P + Y+ L+ GL G++S A
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 696
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF--- 120
R +F+ +L + + + + SL++ CK G+I A + EM + G PDAF YS+
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756
Query: 121 -------------------------------IHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
+ FC+ + ++L + LVPN
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 816
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDE-------------------MIERGANPDEWSYNAI 190
T II L + K+ E + + E MI +G P + + +
Sbjct: 817 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD-VVDDM 875
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ HC ++ AL L + ++ +Y ++ L R G+ A + + M+KRG
Sbjct: 876 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
R + L+ +V FD A +V M +RG + TY+V++ GLC + G +EEA +
Sbjct: 222 RGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC-RSGAVEEAFGFK 280
Query: 279 EMMVDEGIPPYSSTVEMLRNRL 300
+ M D G+ P T L N L
Sbjct: 281 KDMEDYGLVPDGFTYGALINGL 302
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 163/307 (53%), Gaps = 2/307 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P+ + L+ CK K+V A + F + + P V TY+ L+ GL + G+++EA
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D+M+ +I+ HN+LL CK + +A + +M G P+ +Y+I I A
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ F + M + P+V TYNC+I LC+ +E A L+ EM + D
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C++ E+ ALRL+ M ++ + P + TYN ++ + G A +
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
MEK G +V+TY+V++ G CKK KLE+A M+++G+ P T E++ ++
Sbjct: 471 QMEKVGRLANVATYNVLIKGFCKKD-KLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK 529
Query: 304 GFLDIIE 310
GF+ IE
Sbjct: 530 GFVPDIE 536
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
++G+K S+ + L+ L K + + + + + PT+ +++I++ GL VG+L+
Sbjct: 121 DYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLN 180
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE---AHGMLREMRSIGAEPDAFSYS 118
+A + ++M R +++ +N+L++ CK G I + A +L+EMR+ G P+ +++
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFN 240
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I FC+ ++ + +V M R + PNV TYN +I LC N KV EA L D+M+
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS 300
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ ++NA+L C V A L M K+ + P+ TYN+++ + + A
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
++ M +G P VSTY+ ++ GLC +KG LE A
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLC-RKGDLEAA 395
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV +KP+I + LL+ CK K VK A + FD+ K TP V TY+IL+
Sbjct: 297 MVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDEN 356
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L+ ML + D+ +N L+ +C+ G+++ A ++ EM + + D +Y+I
Sbjct: 357 MEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNI 416
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C ++ R+LD M R L P+ TYN +I CK + A L +M + G
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN ++ C + ++ A L+ M ++ ++P+R TY +
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI--------------- 521
Query: 240 EVWESMEKRGFYPSV 254
V E M ++GF P +
Sbjct: 522 -VTEEMMEKGFVPDI 535
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 4/204 (1%)
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + A+ + F Y L +V + N ++ L K ++ + + EMI R
Sbjct: 98 ILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRR 157
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK---LLVRVGRF 235
P S+N ++ C ++N A +I M V + TYN ++ + ++G+
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+A + + M G P+ T+++++ G CK K + A K F M +G+ P T
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDK-NVSAAMKVFAEMNRQGVKPNVVTYNS 276
Query: 296 LRNRLVGLGFLDIIEILADKMERS 319
L N L G ++ L D+M S
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNS 300
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++L S+ + N + ++ KN + ++ + G S N +++
Sbjct: 79 QILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGL 138
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
E+ + M + + P ++N+V+ L +VG+ ++A ++ E M+ RG +V
Sbjct: 139 VKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198
Query: 255 STYSVMVHGLCK--KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
TY+ ++ G CK K GK+ +A + M +GI P T +L
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+KPS + ++ CK +++ A K V TY++L++G +
Sbjct: 437 MCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDK 496
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
L +A L +EMLE+ + + + + E M + G + + G L
Sbjct: 497 LEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHL 539
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 3/269 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P +Y ++HALC + A +F + A TP V TY++L+ GL G
Sbjct: 37 MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L +M +KC + +NSL+ +CKA EA+ +L EM G PD F+Y+
Sbjct: 97 VDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC++ RV + + P+V TY+C+I LCK +++EA L MI+ G
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Query: 180 AN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ P+ +YN++++ C +++ A+ L+ RM + PD TY ++ ++ R D A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
++ M ++G P V T++ ++ GLC++
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 6/310 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P I+ L+ CK K A + F+ F P V TYS L+ GL G
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR 200
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L EA LF M++ C + + +NSL+ C+ G +DEA +L M G+ PD +Y+
Sbjct: 201 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++ FC+ + + +L+ M R L P+V T+ ++ LC+ ++ +A +L EM +
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P ++YN IL +C ++ A + + + + + P+ ++N++++ L +V R A
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-GIPPYSSTVEMLR 297
E+ E +R P V Y+ ++ GLC++K K++EAC+ + M++E G P S T L
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREK-KVDEACRVYRKMLEEPGCLPNSITYSTLI 437
Query: 298 NRLVGLGFLD 307
L G LD
Sbjct: 438 TGLCNAGMLD 447
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 3/248 (1%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D + + SL++ +CK +++A L +M S G PD ++Y+ IHA C N +H
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ L+ M NL PNV TY +I LCK +V+EA LL +M ++ P +YN++++
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A L+ M +PD TY ++ + + D A V+E + RGF P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGLGFLDIIEILA 313
TYS ++ GLC K+G+L+EA F M+ G P + T L + +G +D L
Sbjct: 186 VTYSCLIDGLC-KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 314 DKMERSTS 321
++M + S
Sbjct: 245 ERMAETGS 252
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 3/274 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L++GL V L +A +M+ + D+ + +++ A+C + EA L EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ P+ +Y++ I C+ + +L M++ VP TYN +I LCK E+
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EAY LL+EM+ G PD ++Y ++ C + + ALR+ ++ PD TY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 226 LKLLVRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L + GR A +++ M K G P+ TY+ ++ G C + GK++EA E M +
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC-RMGKMDEAMNLLERMAET 250
Query: 285 GIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
G P T L N L LD L ++M R
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P + L++ CK + A+ + + TP V T++ L+ GL
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSYS 118
LS+A + EM + C + +N++L+ C+A ++EA ML EM P+ S++
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFN 363
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I C+ N +++ +R P+V Y +I LC+ +KV+EA ++ +M+E
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Query: 179 -GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ +Y+ ++ C+ ++ A I ++ +P+ TYN+++ + R +
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDED 479
Query: 238 ATEVWESMEKRGF 250
A E+ + M +RGF
Sbjct: 480 ARELLDDMVQRGF 492
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 176/363 (48%), Gaps = 39/363 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALC--KRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDV 57
M FGI P+IY L L+++ C R + A FD E F P V TY L+ GL V
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G S A +L M+++ C ++ A+N++++++CK + EA + EM + G PD F+Y
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IHA C + V +L+ M ++P+V ++N ++ LCK KV EA+ ++D+MI+
Sbjct: 207 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 266
Query: 178 RGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG P+ SYN ++ +C ++ A+ L M ++ ++PD TY+ ++ L V R
Sbjct: 267 RGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 326
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKK---------------------------- 268
A ++ M P++ TY +++ LCK +
Sbjct: 327 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 386
Query: 269 ------GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
G+LE A F + +G+ P T ++ N L G LD L +M+ + C
Sbjct: 387 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN-GC 445
Query: 323 TIQ 325
T+
Sbjct: 446 TLN 448
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 143/298 (47%), Gaps = 3/298 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P I+ + L+HALC K VA + + P V +++ +V L G+
Sbjct: 194 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 253
Query: 60 LSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++EA + D+M++R C +++++N+L+ CK ID+A + EM PD +YS
Sbjct: 254 VTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 313
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH C + + M + +PN+ TY ++ LCKN + EA LL +
Sbjct: 314 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 373
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+PD N + C E+ A L + ++ + + PD TY++++ L R G D A
Sbjct: 374 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 433
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++++ M++ G + Y+ + G + + A + + MV G +ST+ +
Sbjct: 434 SKLFREMDENGCTLNGCIYNTITRGFLRNN-ETSRAIQLLQEMVARGFSADASTMTLF 490
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L++ CK + + K + F + + E P TYS L+ GL V L +A
Sbjct: 269 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 328
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF EM+ +++ + LL+ +CK + EA +L+ + +PD +I I
Sbjct: 329 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 388
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A ++ + + ++ L P+V+TY+ +I LC+ ++EA +L EM E G +
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
YN I E + A++L+ M D T + +K+L
Sbjct: 449 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 494
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 3/245 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+HN ID A M + P ++ + + + ++ +
Sbjct: 27 LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 140 MKRYNLVPNVFTYNCIIRKLC--KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
M + + PN++T + +I C K+ EA L D+MI G PD +Y ++ C
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A+RL+ M ++N P+ YN ++ L + + A ++ M +G P + TY
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ ++H LC + + MVD I P + + + L G + + DKM
Sbjct: 207 NSLIHALC-NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 265
Query: 318 RSTSC 322
+ C
Sbjct: 266 QRGGC 270
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 3/269 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P +Y ++HALC + A +F + A TP V TY++L+ GL G
Sbjct: 37 MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L +M +KC + +NSL+ +CKA EA+ +L EM G PD F+Y+
Sbjct: 97 VDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC++ RV + + P+V TY+C+I LCK +++EA L MI+ G
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Query: 180 AN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ P+ +YN++++ C +++ A+ L+ RM + PD TY ++ ++ R D A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
++ M ++G P V T++ ++ GLC++
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 6/310 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P I+ L+ CK K A + F+ F P V TYS L+ GL G
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR 200
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L EA LF M++ C + + +NSL+ C+ G +DEA +L M G+ PD +Y+
Sbjct: 201 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++ FC+ + + +L+ M R L P+V T+ ++ LC+ ++ +A +L EM +
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P ++YN IL +C ++ A + + + + + P+ ++N++++ L +V R A
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-GIPPYSSTVEMLR 297
E+ E +R P V Y+ ++ GLC++K K++EAC+ + M++E G P S T L
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREK-KVDEACRVYRKMLEEPGCLPNSITYSTLV 437
Query: 298 NRLVGLGFLD 307
L G LD
Sbjct: 438 TGLCNAGMLD 447
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 3/248 (1%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D + + SL++ +CK +++A L +M S G PD ++Y+ IHA C N +H
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ L+ M NL PNV TY +I LCK +V+EA LL +M ++ P +YN++++
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A L+ M +PD TY ++ + + D A V+E + RGF P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGLGFLDIIEILA 313
TYS ++ GLC K+G+L+EA F M+ G P + T L + +G +D L
Sbjct: 186 VTYSCLIDGLC-KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 314 DKMERSTS 321
++M + S
Sbjct: 245 ERMAETGS 252
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 3/274 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L++GL V L +A +M+ + D+ + +++ A+C + EA L EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ P+ +Y++ I C+ + +L M++ VP TYN +I LCK E+
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EAY LL+EM+ G PD ++Y ++ C + + ALR+ ++ PD TY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 226 LKLLVRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L + GR A +++ M K G P+ TY+ ++ G C + GK++EA E M +
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC-RMGKMDEAMNLLERMAET 250
Query: 285 GIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
G P T L N L LD L ++M R
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P + L++ CK + A+ + + TP V T++ L+ GL
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSYS 118
LS+A + EM + C + +N++L+ C+A ++EA ML EM P+ S++
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFN 363
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I C+ N +++ +R P+V Y +I LC+ +KV+EA ++ +M+E
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Query: 179 -GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ +Y+ ++ C+ ++ A I ++ +P+ TYN+++ + R +
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDED 479
Query: 238 ATEVWESMEKRGF 250
A E+ + M +RGF
Sbjct: 480 ARELLDDMVQRGF 492
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 154/287 (53%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP L+ CK + A + + TP + TY L+ GL GE
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L DEM ++ +++ +NS++ +CKAGNI++A +++EM G +PDA +Y+
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C DI ++L M L P V T+N ++ C +E+ +LL M+E+G
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC R +N ++ RM + V PD +TYN+++K + A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+++ M ++G+ P+V++Y+ ++ KK+ K EA + FE M G+
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKR-KFXEARELFEEMRGHGL 709
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 154/293 (52%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y + ++ LCK K + + + P Y+ L+ G +G + A
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K FDEML +K D + + +L++ + G + E + EM S G +PD +Y+ I
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A ++ + F + + M + + PN+ TY +I LCK+ +++ A +LLDEM ++G +
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN+++ C + A++L+ M + PD TY V+ R+G D+A ++ +
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M RG P+V T++V+++G C G LE+ + M+++GI P + T L
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFC-MLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGE 59
E+GI + + ++++LC+ VK AH+ + +F TP V +YS ++ G +GE
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLL--MQMDFRSSTPDVVSYSTVIDGYCHLGE 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A KL D+M + + +NS++ +CK G EA +LREM S PD Y+
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F + + + + D M + P+ TY +I+ + KV E L EMI RG
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +Y ++ +C E+ A L M + + P+ TY ++ L + G D A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ + M K+G +V Y+ MV+G+C K G +E+A K + M GI P + T + +
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGIC-KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 300 LVGLGFLDII-EILADKMERSTSCTIQELANAMRG 333
LG +D ++L + ++R T+ M G
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+H K HV+ A+++FD + +P TY+ L++G G G++ E + LF EM+ R
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D + + +L++ CKAG + A + EM +G P+ +Y I C+ ++ +
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+LD M++ L NV YN ++ +CK +E+A +L+ EM G +PD +Y ++ +
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +++ A +L+ M + P T+N+++ +G + + M ++G P
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
TY+ ++ C + + K ++ M ++G+ P S+T +L
Sbjct: 609 ITYNTLMKQHCIRNS-MNTTTKIYKRMRNQGVAPDSNTYNIL 649
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P+I L+ LCK + A++ D K V Y+ +V G+ G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A KL EM D + + ++++A C+ G+ID+AH +L+EM G +P ++++
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + R+L M +VP+ TYN ++++ C + ++ M +G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC + A L M ++ +P +YN ++K + +F A
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
E++E M G Y+ V +C ++G +E
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFV-DMCYEEGDVE 730
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 129/273 (47%), Gaps = 4/273 (1%)
Query: 24 KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
K + H+ K+ + P + I + L ++G LSEARKL D++L V + + N
Sbjct: 171 KMTQFTHRLIYTYKY-WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCN 229
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+ L + A N + ++ G + SY+I I++ C + R+L M
Sbjct: 230 AFLSRI--ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFR 287
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V +Y+ +I C ++++A +L+D+M +G P+ ++YN+I+ C + A
Sbjct: 288 SSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA 347
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+++ M + ++PD Y ++ ++G A + ++ M + P TY+ ++ G
Sbjct: 348 EKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQG 407
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ GK+ E F M+ G+ P T L
Sbjct: 408 F-GQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P ++ A C+ + AH+ PTV T+++L+ G +G L +
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG 592
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L MLE+ D + +N+L++ C +++ + + MR+ G PD+ +Y+I I
Sbjct: 593 DRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A ++ + + M VP V +YN +I++ K K EA +L +EM G D
Sbjct: 653 HCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVAD 712
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
YN + + +V + L L ++ ++ +R
Sbjct: 713 GEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNER 748
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 159/307 (51%), Gaps = 1/307 (0%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
++ LL +L + K K A F + FTP ++TY++L+ G V L EA ++++EML+
Sbjct: 212 INALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLD 271
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
DI+ HN +LE + ++ +A M++ G PD SY+I I C+ +
Sbjct: 272 EGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKE 331
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
M P+ Y C++ +++++ Y+LL EM E+G PD +YNA++
Sbjct: 332 AVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIK 391
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ + A+R+ +M + + P H+YNM++K R+ ++ VW+ M K+GF P
Sbjct: 392 LMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCP 451
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
++Y+V + GL +G+ EEACKY E M+++G+ G DI+E L
Sbjct: 452 DDNSYTVFIGGLI-SQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEEL 510
Query: 313 ADKMERS 319
A KM+ S
Sbjct: 511 AQKMKFS 517
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M++ G KP I + +L L + K A +FF+ K + +P V++Y+IL+R L +
Sbjct: 269 MLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTK 328
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA F EM++ C D + L+ +D + +L+EM+ G PD +Y+
Sbjct: 329 MKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNA 388
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I R+ M + + P++ +YN I++ + E + + DEM ++G
Sbjct: 389 LIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKG 448
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ SY + + A + + M ++ + + YN R G+ D
Sbjct: 449 FCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILE 508
Query: 240 EVWESMEKRGFYPSVSTYS 258
E+ + M+ G + + ++
Sbjct: 509 ELAQKMKFSGKFEVSNVFA 527
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 7/337 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG +P ++ + L LC+ V A + D +H +P V TY+ LV
Sbjct: 306 MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQ 365
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A L +EM ++ ++ HN +++ +C+ G ++EA G L+ M G PD +Y+
Sbjct: 366 RSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYN 425
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I A+C+A ++ F ++D M R L + FT N ++ LCK ++ EEA +LL +R
Sbjct: 426 TLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQR 485
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE SY ++A + + AL L M+K + P +TYN ++K L +G+ A
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEA 545
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + K+G P +TY++++H C K+G LE+A ++ M++ P T L N
Sbjct: 546 IDKLNELMKKGLVPDDTTYNIIIHAYC-KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMN 604
Query: 299 RLVGLGFLD----IIEILADKMERSTSCTIQELANAM 331
L G L+ + E A+K ++ T L A+
Sbjct: 605 GLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQAL 641
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+K S+ + ++ LC+ ++ A E P V TY+ L+
Sbjct: 377 MRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARN 436
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L DEM+ +D N+LL +CK +EA +LR G PD SY
Sbjct: 437 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGT 496
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + N + D M + L P+++TYN +I+ LC K+ EA L+E++++G
Sbjct: 497 VMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG 556
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +YN I+ +C ++ A + +M + PD T N ++ L G+ ++A
Sbjct: 557 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAI 616
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ES ++G V TY+ ++ LC K G ++ A +F M G+ P + T ++ +
Sbjct: 617 KLFESWAEKGKKVDVITYNTLIQALC-KDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675
Query: 300 LVGLGFLDIIEILADKMERS 319
L G + + + K++ S
Sbjct: 676 LSEAGRSEEAQNMLHKLDES 695
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+K + L+ LL+ LCK K + A + + F P +Y ++ +
Sbjct: 447 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK 506
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L+DEM +RK I +N+L++ +C G + EA L E+ G PD +Y+I
Sbjct: 507 PEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNI 566
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA+C+ D+ F+ + M P+V T N ++ LC + K+E+A +L + E+G
Sbjct: 567 IIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C +V+ AL M + PD TYN+VL L GR + A
Sbjct: 627 KKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQ 686
Query: 240 EVWESMEKRG 249
+ +++ G
Sbjct: 687 NMLHKLDESG 696
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 150/368 (40%), Gaps = 73/368 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
++ + P+ Y + L+H C + + A + +P V TY+ L++ G
Sbjct: 201 LIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGM 260
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR L M + +N+L+ A + G I +A ++ M + G EPD ++Y++
Sbjct: 261 LGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNV 320
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNC------------------------ 154
C+A + F++ D M+ ++V P+V TYN
Sbjct: 321 LAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDK 380
Query: 155 -----------IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+++ LC+ ++EEA L M E G PD +YN ++ +C V A
Sbjct: 381 GVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKA 440
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE----------------------- 240
L+ M + + D T N +L L + R++ A E
Sbjct: 441 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAA 500
Query: 241 ------------VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+W+ M KR PS+ TY+ ++ GLC GKL EA ++ +G+ P
Sbjct: 501 YFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLC-TIGKLTEAIDKLNELMKKGLVP 559
Query: 289 YSSTVEML 296
+T ++
Sbjct: 560 DDTTYNII 567
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
VFR L +++ L PN +T+N ++ C + +A L M G +PD +YN +L
Sbjct: 197 VFRSLIALR---LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLK 253
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
HC + + A L+ RM KE + P R TYN ++ R+G +AT V E+M GF P
Sbjct: 254 AHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEP 313
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMM-----VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ TY+V+ GLC + GK++EA K + M V + Y++ V+ L+
Sbjct: 314 DLWTYNVLAAGLC-QAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALN 372
Query: 308 IIEILADKMERSTSCT 323
++E + DK +S+ T
Sbjct: 373 LLEEMRDKGVKSSLVT 388
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 49/282 (17%)
Query: 81 AHNSLLEAMCKAGNIDEAHGM--LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
A N++L A+ ++ + + R + ++ P+ +++++ +H C + L
Sbjct: 175 AANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLS 234
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM----------------------- 175
+M+ + L P+V TYN +++ C+ + EA LL M
Sbjct: 235 TMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLG 294
Query: 176 -IERGAN-----------PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM-PDRHTY 222
I++ N PD W+YN + A C +V+ A +L M +++ PD TY
Sbjct: 295 WIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTY 354
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ + R A + E M +G S+ T++++V GLC ++G+LEEA +MM
Sbjct: 355 NTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLC-REGQLEEALGRLKMMT 413
Query: 283 DEGIPPYSSTVEML-----RNRLVGLGFLDIIEILADKMERS 319
+EG+ P T L + R V F +L D+M RS
Sbjct: 414 EEGLAPDVITYNTLIDAYCKARNVAKAF-----VLMDEMVRS 450
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 154/296 (52%), Gaps = 7/296 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + ++ CK + A D + +P V TY+ ++R L D G+L +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLD--RMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D ML+R C D++ + L+EA C+ + A +L EMR G PD +Y++ ++
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + L+ M PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M + P+ +YN +L + + DRA E E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M RG YP + TY+ M+ LC K GK+E+A + + +G P Y++ ++ L
Sbjct: 405 MVSRGCYPDIVTYNTMLTALC-KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ P + L+ A C+ V A + D + TP V TY++LV G+ G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA K ++M C +++ HN +L +MC G +A +L +M G P +++I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + +L+ M ++ PN +YN ++ CK +K++ A + L+ M+ RG
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +L C +V A+ ++ +++ + P TYN V+ L + G+ +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++ + M + P TYS +V GL ++GK++EA K+F GI P + T
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGL-SREGKVDEAIKFFHEFERMGIRPNAVT 521
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + + L++ +CK + A +F D P V T++I++R + G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL +ML + ++ N L+ +C+ G + A +L +M G +P++ SY+
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC+ + L+ M P++ TYN ++ LCK+ KVE+A ++L+++ +G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + A++L+ M +++ PD TY+ ++ L R G+ D A
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + E+ G P+ T++ ++ GLCK + + + A + M++ G P ++ +L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSR-QTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 142/276 (51%), Gaps = 7/276 (2%)
Query: 17 LHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L + + ++ +F +N H P + + L+RG +G+ +A K+ E+LE
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSG 167
Query: 76 PV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
V D++ +N ++ CKAG I+ A +L M PD +Y+ + + C++ +
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VLD M + + P+V TY +I C++ V A +LLDEM +RG PD +YN ++
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ A++ + M P+ T+N++L+ + GR+ A ++ M ++GF PSV
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
T++++++ LC +KG L A E M G P S
Sbjct: 345 VTFNILINFLC-RKGLLGRAIDILEKMPQHGCQPNS 379
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 137/264 (51%), Gaps = 8/264 (3%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+R + GEL E K + M+ DI+ +L+ C+ G +A +L + GA
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD +Y++ I +C+A +I++ VLD R ++ P+V TYN I+R LC + K+++A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+LD M++R PD +Y ++ C + V A++L+ M PD TYN+++ +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A + M G P+V T+++++ +C G+ +A K M+ +G P
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSV 344
Query: 291 STVEMLRNRLVGLGFL----DIIE 310
T +L N L G L DI+E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILE 368
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 5/243 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+ L M + G ++E L M G PD + I FC ++L+ ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
VP+V TYN +I CK ++ A +LD M +PD +YN IL CD ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ ++ RM + + PD TY ++++ R A ++ + M RG P V TY+V+V+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
G+C K+G+L+EA K+ M G P T ++ + G ++D ++LAD + + S
Sbjct: 283 GIC-KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 322 CTI 324
++
Sbjct: 342 PSV 344
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + +H P +Y+ L+ G +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N++L A+CK G +++A +L ++ S G P +Y+
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A ++LD M+ +L P+ TY+ ++ L + KV+EA + E G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+I+ C + + A+ + M P+ +Y ++++ L G A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 240 EVWESMEKRGFYPSVSTYSV 259
E+ + +G S V
Sbjct: 575 ELLNELCNKGLMKKSSAEQV 594
>gi|414589415|tpg|DAA39986.1| TPA: empty pericarp 2 [Zea mays]
Length = 455
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M F P++ DL LL L V+ A FF + +F + KTY+IL+ G V
Sbjct: 176 MERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFDLSAKTYTILISGWAVVASP 235
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSI 119
+A+KLFDEM+ER D+ A+N+L++A+C+ G++ A L++M RS G PDA +Y
Sbjct: 236 VKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGP 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ + C + D + RVLD M+ +L PNVFTYN +IR LC+ +V+EAY +L+EM G
Sbjct: 296 FLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILNEMATYG 355
Query: 180 ANPDEWSYNAILAYHCDRAEVNM 202
PD WSYN +L HC E M
Sbjct: 356 EKPDVWSYNTLLNTHCKLKEAIM 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH-NSLLEAMCKAGNIDEAHGMLREM 105
+ +L R G +A + F M ER C + +A +SLL + G ++ A RE
Sbjct: 153 FPLLFRAYARAGLPEDAIRAFSSM-ERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRE- 210
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ A +Y+I I + ++ D M + P+V YN +I LC+ V
Sbjct: 211 SPFQFDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDV 270
Query: 166 EEAY-QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
A QL D RG PD +Y L C + ALR++ RM ++ P+ TYN
Sbjct: 271 ALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNA 330
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
V++LL +G D A + M G P V +Y+ +++ CK K
Sbjct: 331 VIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLK 374
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 155/283 (54%), Gaps = 2/283 (0%)
Query: 15 QLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+H LC+ + A + F D + PTV+TY++L+ L G EA LF+EM E+
Sbjct: 269 NLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C ++ + L++ +CK +DEA ML EM G P +Y+ I +C+ I
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
F +LD M+ + PN TYN +I LCK KV +A LL++M+ER +P +YN+++
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A RL++ M + ++PD+ TY++ + L + GR + A +++S++ +G +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
Y+ ++ G C K GK++ A E M+++ P S T +L
Sbjct: 509 EVIYTALIDGYC-KVGKIDVAYSLLERMLNDACLPNSYTYNVL 550
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 6/348 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ PS+ + L+ CK + A + D + P +TY+ L+ GL +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L ++MLERK ++ +NSL+ CK +++ A+ +L M G PD ++YS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ + + DS+K + N Y +I CK K++ AY LL+ M+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN ++ C ++ A L+ +M V P TY +++ +++ G FD A
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V+ M G+ P V TY+ +H +G LEE M +EGI P T +L +
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAY-FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658
Query: 300 LVGLGF----LDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSE 343
LG D ++ + D + + + L + + +++RSE
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSE 706
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 146/300 (48%), Gaps = 2/300 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P+IY + +++ CK +V A + + P TY+ L+ G + A
Sbjct: 190 ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAY 249
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F M ++ C + +++ +L+ +C+AG I+EA + +M P +Y++ I+A
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + MK PNV TY +I LCK K++EA ++L EM E+G P
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YNA++ +C ++ A ++ M + P+ TYN ++ L + + +A +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M +R PS+ TY+ ++HG CK LE A + +M + G+ P T + + L G
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVN-DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
EF KP++ + +L +L K + ++ + + ++ +P + T++ +V G +G +
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA ++++ D + SL+ C+ +D A+ + M G + + SY+ I
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H CEA I+ ++ M N P V TY +I L + + EA L +EM E+G
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y ++ C +++ A ++++ M+++ ++P TYN ++ + G D A E+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ ME P+ TY+ ++ GLCKK+ K+ +A M++ + P
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKR-KVHKAMALLNKMLERKLSP 437
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 55/343 (16%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ Y + L+ LCK K +K A PTV TY+IL+ + G A K+
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ M+ D+ + + L A G ++E ++ +M G PD +Y++ I +
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFT----------------------------------- 151
H F L M P+++
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIA 721
Query: 152 ------------------YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
Y +I C+ E++EEA L+ M ERG +P E YN++L
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C A+RL+ M + ++P +Y +++ L G ++A V+ + G+
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ V++ GL K+ ++E + ++M ++G P T +L
Sbjct: 842 EVAWKVLIDGLLKRD-LVDECSELIDIMEEKGCQPNPLTYSLL 883
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G KPS+Y + N HE I + + + E
Sbjct: 675 MVDTGCKPSLY----------------IVSILIKNLSHENRMKETRSEIGIDSVSNTLEY 718
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A KLF++M+E C +D+ + +L+ C+ ++EA G++ M+ G P Y+
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ C+ R++D+M L+P + +Y ++ L E+A + ++ G
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 838
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
N DE ++ ++ R V+ LI M ++ P+ TY+++++ L R
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 120 FIHAFCEANDIH---SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I + C D+ VFR +++ + P + YN I+ L K ++E + E++
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+P+ +++NA++ +C V A +++ + + PD TY ++ R D
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A EV+ M ++G + +Y+ ++HGLC + G++ EA K F M ++ P T +L
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLC-EAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 297 RNRLVGLG 304
L G G
Sbjct: 306 IYALSGSG 313
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG+K + D + L+ L K K VK AH F K + F P +KTY++L+ G G
Sbjct: 214 MSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEK 273
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L + ++ EML+ D++A+ L+ A CK+G DEA + EM G P Y
Sbjct: 274 DLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYC 333
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ + + K V T N +I C+ + A++++DEM +
Sbjct: 334 MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKS 393
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +Y+ IL + ++ A L RM ++ P+ +TY M++ + R D A
Sbjct: 394 GIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMA 453
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW+ M+++G P + +S +++GLC + +LEEAC YF+ M+D+GI P L+
Sbjct: 454 LKVWKQMKEKGVLPCMHMFSALINGLCFEN-RLEEACVYFQEMLDKGIRPPGQLFSNLKE 512
Query: 299 RLVGLGFLDIIEILADKME 317
LV G + + + + ++E
Sbjct: 513 ALVEGGRITLAQEVTQRLE 531
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 163/308 (52%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P L++ LC A +FFD + P + TY+ +++G +G+
Sbjct: 145 IIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGK 204
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + DI+ +N++++ +CK + EA + E++ G PD F+YSI
Sbjct: 205 TTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSI 264
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C ++ + + M N++P+V T+N ++ KLCK + EA ++ MIE+G
Sbjct: 265 LMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKG 324
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C + +V A + M + MP+ +YN+++ + R D A
Sbjct: 325 VEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAR 384
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+++ M RG P+ Y+ ++ GLC + G+ EA + F+ M +G P T +L +
Sbjct: 385 ELFDEMSFRGLIPNTFNYNTLISGLC-QAGRHCEARELFKDMQAQGCSPDLVTCTILLDS 443
Query: 300 LVGLGFLD 307
L LG+LD
Sbjct: 444 LCKLGYLD 451
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 140/268 (52%), Gaps = 2/268 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P I + ++ LCK + V A F K + P V TYSIL+ GL + + EA
Sbjct: 219 GGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEA 278
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF+EM+ D++ N L++ +CK G + EA G+++ M G EP+ +Y+ ++
Sbjct: 279 SALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C N + V D+M +PNV +YN +I CK ++++EA +L DEM RG P+
Sbjct: 339 YCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPN 398
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN +++ C A L M + PD T ++L L ++G D A ++
Sbjct: 399 TFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFR 458
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+M+ P++ TY +++ + K GK+
Sbjct: 459 AMQDSCLKPNLVTYDILIRAM-YKSGKI 485
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G++P ++ L+H LC + A F+ P V T++ILV L G LSEA
Sbjct: 254 GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + M+E+ + +NSL+ C + EA + M + G P+ SY+I I+
Sbjct: 314 QGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A I + D M L+PN F YN +I LC+ + EA +L +M +G +PD
Sbjct: 374 YCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPD 433
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ +L C ++ ALRL M + P+ TY+++++ + + G+ R
Sbjct: 434 LVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P I + D+LL AL + KH + V ++IL+ + + A +
Sbjct: 82 PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++++ D + +SL+ +C A EM + G +P+ +Y+ I FC+
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+L M + P++ YN II LCK+ V EA + E+ +G PD ++
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C+ + A L M N+MPD T+N+++ L + G A + + M
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++G P+ +TY+ +++G C + K+ EA F+ M+ +G P + +L N
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQN-KVFEARMVFDAMITKGCMPNVVSYNILIN 372
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ M+ + I+ + LL A+ + + + + + + E D F ++I I+ F
Sbjct: 72 FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F VL + + P+ T++ +I LC +K A + DEM+ G P+ +
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN I+ C + +A+ L+ +M K PD YN ++ L + A +++ ++
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G P V TYS+++HGLC K EEA F M+ I P T +L ++L G L
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQK-EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310
Query: 307 D----IIEILADKMERSTSCTIQELANA 330
II+I+ +K T L N
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNG 338
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+K C +E+A + MI + P ++ +L+ L L R+ +
Sbjct: 57 QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
D +N+++ R+ R D A V + K GF P T+S +++GLC + K A +
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFED-KFARAME 175
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+F+ MV G P T + +G + L KM+++
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKA 218
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 166/320 (51%), Gaps = 3/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M +FG + + D ++LL LCK ++VK A + FD KH F P +K+Y+IL+ G G
Sbjct: 216 MEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQN 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + +++ EM + D++ L+ A CKA DEA + EM + +P +
Sbjct: 276 LLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCT 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + +K P TYN ++ C + K+ AY+++DEM + G
Sbjct: 336 LINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSG 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y+ IL + + A + RM++E P TY++++++ R D A
Sbjct: 396 VGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMA 455
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++W+ M+ +G P + +S +++ LC + KLE+AC YF+ M+D GI P ++ L+
Sbjct: 456 IQIWDEMKAKGVLPGMHLFSTLINSLCHEH-KLEDACTYFQEMLDVGIRPPATMFSNLKQ 514
Query: 299 RLVGLGFLDIIEILADKMER 318
L+ G D ++A+K+++
Sbjct: 515 ALLDDGRKDTALLMAEKIKK 534
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
IKPS + L++ L K +K A +FF+ K F P TY+ +V +++ A
Sbjct: 326 IKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAY 385
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHA 123
++ DEM + + ++ +L + K EA+ + + M R G EP +Y I I
Sbjct: 386 RMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRM 445
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ D MK ++P + ++ +I LC K+E+A EM++ G P
Sbjct: 446 FCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPP 505
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
++ + D + AL + ++ K P
Sbjct: 506 ATMFSNLKQALLDDGRKDTALLMAEKIKKLRKAP 539
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M + G+ P+ D +LH L K + K A+ F E PT+ TY I++R +
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A +++DEM + + ++L+ ++C +++A +EM +G P A +S
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFS 510
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
A + + + + +K+ P V
Sbjct: 511 NLKQALLDDGRKDTALLMAEKIKKLRKAPLV 541
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 155/283 (54%), Gaps = 2/283 (0%)
Query: 15 QLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+H LC+ + A + F D + PTV+TY++L+ L G EA LF+EM E+
Sbjct: 269 NLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C ++ + L++ +CK +DEA ML EM G P +Y+ I +C+ I
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
F +LD M+ + PN TYN +I LCK KV +A LL++M+ER +P +YN+++
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A RL++ M + ++PD+ TY++ + L + GR + A +++S++ +G +
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
Y+ ++ G C K GK++ A E M+++ P S T +L
Sbjct: 509 EVIYTALIDGYC-KVGKIDVAYSLLERMLNDACLPNSYTYNVL 550
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 6/348 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ PS+ + L+ CK + A + D + P +TY+ L+ GL +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L ++MLERK ++ +NSL+ CK +++ A+ +L M G PD ++YS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ + + DS+K + N Y +I CK K++ AY LL+ M+
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN ++ C ++ A L+ +M V P TY +++ +++ G FD A
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V+ M G+ P V TY+ +H +G LEE M +EGI P T +L +
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYF-SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658
Query: 300 LVGLGF----LDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSE 343
LG D ++ + D + + + L + + +++RSE
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSE 706
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P+IY + +++ CK +V A + + P TY+ L+ G + A
Sbjct: 190 ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAY 249
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F M ++ C + +++ +L+ +C+AG I+EA + +M P +Y++ I+A
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + MK PNV TY +I LCK K++EA ++L EM E+G P
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YNA++ +C ++ A ++ M + P+ TYN ++ L + + +A +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M +R PS+ TY+ ++HG CK LE A + +M + G+ P T + + L
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVN-DLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
EF KP++ + +L +L K + ++ + + ++ +P + T++ +V G +G +
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA ++++ D + SL+ C+ +D A+ + M G + + SY+ I
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H CEA I+ ++ M N P V TY +I L + + EA L +EM E+G
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y ++ C +++ A ++++ M+++ ++P TYN ++ + G D A E+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ ME P+ TY+ ++ GLCKK+ K+ +A M++ + P
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKR-KVHKAMALLNKMLERKLSP 437
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 134/322 (41%), Gaps = 31/322 (9%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G+K + L+ CK + VA+ + ++ P TY++L+ GL ++ EA
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +ML ++ + L+ M K G D A + M S+G +PD +Y+ F+HA
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + V V+ M ++P++ TY +I + A+ L M++ G P
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 184 EWSYNAILA--YHCDRA---------------------------EVNMALRLITRMTKEN 214
+ + ++ H +R E +AL+L +M +
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG 743
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
D Y ++ + R + A + M++RG PS Y+ ++ CK G EA
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL-GVYAEA 802
Query: 275 CKYFEMMVDEGIPPYSSTVEML 296
+ + MV+ G+ P + ++L
Sbjct: 803 VRLVDAMVENGLLPLLESYKLL 824
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 30/297 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP++ L+ + K A + F++ + P V TY+ + G
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E + +M E D++ + L++ + G A L+ M G +P + SI
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 120 FIHAFCEAN--------------------DIHSVFRVLD---------SMKRYNLVPNVF 150
I N DI V++ L+ M + +V
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVS 749
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
Y +I C+ E++EEA L+ M ERG +P E YN++L C A+RL+ M
Sbjct: 750 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 809
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ ++P +Y +++ L G ++A V+ + G+ + V++ GL K+
Sbjct: 810 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 866
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 120 FIHAFCEANDIH---SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I + C D+ VFR +++ + P + YN I+ L K ++E + E++
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+P+ +++NA++ +C V A +++ + + PD TY ++ R D
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A EV+ M ++G + +Y+ ++HGLC + G++ EA K F M ++ P T +L
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLC-EAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 297 RNRLVGLG 304
L G G
Sbjct: 306 IYALSGSG 313
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G KPS+Y + L+ L +K ++ S+ + + E
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETR-----SEIGIDSVSNVNSVDIADVWKTLEY 729
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A KLF++M+E C +D+ + +L+ C+ ++EA G++ M+ G P Y+
Sbjct: 730 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 789
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ C+ R++D+M L+P + +Y ++ L E+A + ++ G
Sbjct: 790 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 849
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
N DE ++ ++ R V+ LI M +++ ++ L+R+ +
Sbjct: 850 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQA---DIACAALMRLAAANSTKG 906
Query: 241 VWESMEKRGF 250
E E RG
Sbjct: 907 ALEDHELRGL 916
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G P+ + ++ LC++ + A Q F + + P +Y IL+ GL G+
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGK 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA KLF ML+ + +N ++ MC A +DEA + + MRS G P F+++I
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + FR+L M VP+V TY+ +I LC +V++A LL++M++R
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + N ++ C + A ++ M PD TYN ++ R G+ +RA
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M RG P+V TY+ +V GLCK +L EAC F M G P
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAP 428
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G PS + ++ A CKR ++ A + P V TY+ ++ GL + EA
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF+EM C + +HN+++ +C+ ID+A + EM + PD++SY I I
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A ++ +++ M + P+ TYN +I +C ++EA +L M +G P
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N ++ HC R +++ A RL+ RMT + +PD TY+ ++ L + R D A + E
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M KR P+V T + ++HGLC K G+++EA + + MV G P
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLC-KAGRIKEAREVLDAMVSSGQSP 358
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 8/289 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +PS + + L+ A CKR + A + + P V TYS L+ GL + + +A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L ++M++R+C ++ N+L+ +CKAG I EA +L M S G PD +Y+ +H
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A +L M L PNV TY ++ LCK ++ EA + +M G P+
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW- 242
++Y A++ C +V+ L+L M + PD Y + L + GR RA E+
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 243 ---ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
ES+ + V Y V GL + GK+E A + MV G P
Sbjct: 490 EGRESLRSEAWGDEV--YRFAVDGLL-EAGKMEMALGFVRDMVRGGQLP 535
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 143/267 (53%), Gaps = 1/267 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P +Y IL+ GL G+L++AR LF ++L +A+ SL+ +C A + D+A
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ +M G P +Y++ I A C+ + ++ M VP+V TYN ++ LC
Sbjct: 67 LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K+ +VEEA L +EM G P+ S+N I+ C +++++ A ++ M +++ PD
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+Y +++ L + G+ + A ++++ M G PS TY+V++HG+C L+EA + F+
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAY-TLDEALELFKS 245
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M +G P T +L + G LD
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLD 272
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+ L K + A++ F TP+ TY++++ G+ L EA
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF M + C N L++A CK G +DEA +L+ M G PD +YS I
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ M + P V T N +I LCK +++EA ++LD M+ G +PD
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ HC + A L++ M + P+ TY ++ L + R A V+
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+ G P++ TY+ ++ G C G+++ K F MV GI P
Sbjct: 421 MKSSGCAPNLFTYTALILGFC-SAGQVDGGLKLFGEMVCAGISP 463
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
++ G+ PS L+H LC A + F D + P+ TY++++ G
Sbjct: 36 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L +M+E D++ +N++++ +CK+ ++EA + EM +G P+ S++
Sbjct: 96 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + I +V M+ ++ P+ ++Y +I L K K+ EAY+L M++ G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C ++ AL L M + P R T+N+++ + G+ D A
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M G P V TYS ++ GLC ++++A E MV P T L +
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLC-SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 300 LVGLG 304
L G
Sbjct: 335 LCKAG 339
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 1/223 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M ER D ++ L++ + KAG +++A + +++ G P +Y+ IH C AN
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ M R P+ TYN +I CK +EEA L+ +MIE G PD +YN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C + V AL L M + P+R ++N ++ L + + D+A +V+ ME +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
P +Y +++ GL K GKL EA K F+ M+D GI P + T
Sbjct: 181 IPPDSWSYGILIDGL-AKAGKLNEAYKLFQRMLDSGITPSAVT 222
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 163/316 (51%), Gaps = 1/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G K + ++ LL +L K K A F+ K FTP+++TY+IL+ G + L
Sbjct: 160 MKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNL 219
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EM++R DI+AHN +LE + K +A + M++ G P+ SY+I
Sbjct: 220 LEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIM 279
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + D M P+ Y C+I + +K++ Y LL EM ERG
Sbjct: 280 IQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGC 339
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ + + A+R+ +M + + P HTYNM++K ++ E
Sbjct: 340 PPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHE 399
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+W+ M +G P ++Y V + GL ++ + EACKY E M+++G+ + +
Sbjct: 400 IWDEMHPKGCCPDDNSYIVYIGGLIRQD-RSGEACKYLEEMLEKGMKALKLDYNKFASDI 458
Query: 301 VGLGFLDIIEILADKM 316
G I+E LA KM
Sbjct: 459 SKTGNAVILEELARKM 474
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 89 MCKAGNIDEAHGMLREMRSIGAEP--DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
MC G + M+ ++ +G + ++SI I AF EA + D MK+Y
Sbjct: 107 MCVLGRTRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFK 166
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
V N ++ L + +EA + +++ +R P +Y +L+ C + A R+
Sbjct: 167 VGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTYTILLSGWCRLKNLLEAGRV 225
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M PD +N++L+ L++ + A +++E M+ +G P+V +Y++M+ CK
Sbjct: 226 WNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCK 285
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
+K + EA +YF++MVD G P
Sbjct: 286 QK-LMGEAIEYFDVMVDRGCQP 306
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 38/183 (20%)
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY------- 193
KR + TYN ++ L + + E L+EM E+G E AI A+
Sbjct: 92 KRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRK 151
Query: 194 --------------------------HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A++ + + K+ P TY ++L
Sbjct: 152 KEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLS 211
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEG 285
R+ A VW M RGF P + ++VM+ GL CKKK +A K FE+M +G
Sbjct: 212 GWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKK---SDAIKLFEIMKAKG 268
Query: 286 IPP 288
P
Sbjct: 269 PSP 271
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GIKP+I+ + ++ + K+ ++ H+ +D + P +Y + + GL
Sbjct: 369 MIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDR 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
EA K +EMLE+ L +N + K GN + R+M +G
Sbjct: 429 SGEACKYLEEMLEKGMKALKLDYNKFASDISKTGNAVILEELARKMNFVG 478
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 50/363 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G +P Y + L+ C+ V VA FD F V +Y+ L+ GL + G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-- 117
+ EA +LF EM + D+ + +L++ +C A +E MLR M+ +G P +Y
Sbjct: 61 IDEAVELFGEMDQP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 118 ---------------------------------SIFIHAFCEANDIHSVFRVLDSMKRYN 144
+ I+A+C+ + RVL+ MK
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV+TYN +++ C KV +A LL++M G NPD +YN ++ C + A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + ++ D++TYN ++ L + GR D+A +++S+E RG P+ T++ +++GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML---RNRLVGLGFLDIIEILADKME 317
C K GK + A K+ E MV G P YSS +E L + GL F I E+L ++
Sbjct: 297 C-KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF--IGEMLQKDVK 353
Query: 318 RST 320
ST
Sbjct: 354 PST 356
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G +PS ++ C+ + K A + + P V T + ++ G
Sbjct: 102 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 161
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A ++ + M R C ++ +N+L++ C G + +A +L +MR+ G PDA +Y++
Sbjct: 162 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C I S FR+L M+ L+ + +TYN +I LCK+ + ++A L D + RG
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+++ C + ++A + + +M PD +TY+ ++ L ++
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++ PS Y++++H L K++ A + E MV G P
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE-MVSSGCNP 389
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + +++A CK + A + + K P V TY+ LV+G + G+
Sbjct: 137 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 196
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ +A L ++M R C V D + +N L+ C G+I+ A +LR M G D ++Y
Sbjct: 197 VHKAMTLLNKM--RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 254
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+A C+ + DS++ + PN T+N +I LCK+ K + A++ L++M+
Sbjct: 255 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 314
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD ++Y++ + + C L I M +++V P Y +V+ L++ +
Sbjct: 315 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 374
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
W M G P V TY+ + C +G+L EA M G+
Sbjct: 375 VARTWGEMVSSGCNPDVVTYTTSMRAYC-IEGRLNEAENVLMEMSKNGV 422
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 1/265 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ C H++ A + + + TY+ L+ L G +A
Sbjct: 211 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 270
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LFD + R + + NSL+ +CK+G D A L +M S G PD ++YS FI
Sbjct: 271 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEH 330
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + M + ++ P+ Y +I KL K + EM+ G NPD
Sbjct: 331 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 390
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y + +C +N A ++ M+K V D YN ++ +G+ D A + +
Sbjct: 391 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 450
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK 268
M P+ TY +++ L + +
Sbjct: 451 QMTSVASVPNQFTYFILLRHLVRMR 475
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 18/285 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KPS + ++H L K R + VA + + P V TY+ +R G
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA + EM + VD +A+N+L++ G D A +L++M S+ + P+ F+Y I
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466
Query: 120 FIH-----------------AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+ +A ++ VF + D MK+ +PN TY+ I+ ++
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 526
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ EEA L+ M E + +E Y A++ C A L+ M + +P +Y
Sbjct: 527 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 586
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+L L+ G+ D+A E++ + + + P + V++ GL KK
Sbjct: 587 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 631
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 171/331 (51%), Gaps = 6/331 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G KP I + ++ +LCK K V A FF + + P V TY+ LV GL +
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A +L +M+++K +++ +++LL+A K G + EA + EM + +PD +YS
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + I ++ D M + +V +YN +I CK ++VE+ +L EM +RG
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN ++ +V+ A ++M + PD TYN++L L G ++A
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M+KR + TY+ ++ G+CK GK+EEA F + +G+ P T + +
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582
Query: 300 LVGLGFLDIIEILADKMER----STSCTIQE 326
L G L +E L KM++ CT+ +
Sbjct: 583 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 151/284 (53%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
++P + + ++ LCK KH+ A F + + P V TYS L+ L + G S+A
Sbjct: 866 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK D+ ++L++A K G + EA + EM +P +YS I+ F
Sbjct: 926 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 985
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK ++VEE ++ EM +RG +
Sbjct: 986 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + +MA + M + V P+ TYN +L L + G+ ++A V+E
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCNLSLKGVKP 1148
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 157/316 (49%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + L+H L A D P + TY ++V GL G+ A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L ++M + K +L +N++++ +CK ++D+A + +EM + G P+ +YS I
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C R+L M + P+VFT++ +I K K+ EA +L DEM++R +P
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C ++ A ++ M ++ PD TYN ++K + R + EV+
Sbjct: 975 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG + TY++++ GL + G + A + F+ MV +G+PP T L + L
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQA-GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093
Query: 304 GFLDIIEILADKMERS 319
G L+ ++ + ++RS
Sbjct: 1094 GKLEKAMVVFEYLQRS 1109
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P+I L LL+ C K + A D + P T++ L+ GL +
Sbjct: 756 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ + C D++ + ++ +CK G+ D A +L +M EP Y+
Sbjct: 816 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M+ + PNV TY+ +I LC + +A +LL +MIER
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD ++++A++ ++ A +L M K ++ P TY+ ++ R D A
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + +P V TY+ ++ G CK K ++EE + F M G+ + T +L
Sbjct: 996 QMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054
Query: 300 LVGLGFLDIIE 310
L G D+ +
Sbjct: 1055 LFQAGDCDMAQ 1065
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 900 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 959
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R I+ ++SL+ C +DEA M M S PD +Y+ I
Sbjct: 960 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 1019
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + V M + LV N TYN +I+ L + + A ++ EM+ G P+
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 1080 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 1139
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P V Y+ M+ G C +KG EEA F+ M ++G P S ++R RL
Sbjct: 1140 NLSLKGVKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 161/337 (47%), Gaps = 5/337 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
GI+ +Y + +++ C V +A K + P T LV G +S+
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 276
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L D+M+E DI+A+N++++++CK +++A +E+ G P+ +Y+ ++
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C ++ R+L M + + PNV TY+ ++ KN KV EA +L +EM+ +P
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y++++ C ++ A ++ M + + D +YN ++ + R + +++
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M +RG + TY+ ++ G + G +++A ++F M GI P T +L L
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFF-QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 515
Query: 303 LGFLD-IIEILADKMERSTSCTIQELANAMRG--KTG 336
G L+ + I D +R I +RG KTG
Sbjct: 516 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
MV+ I PSI L++ C + A Q F+ +KH F P V TY+ L++G
Sbjct: 966 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 1024
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ E ++F EM +R + + +N L++ + +AG+ D A + +EM S G P+ +Y+
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 1084
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + V + ++R + P ++TYN +I +CK KVE+ + L + +
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +++ C + A L M ++ +P+ YN +++ +R G + +
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ + M GF ST ++ + L G+L+++
Sbjct: 1205 AELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 1238
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 154/319 (48%), Gaps = 11/319 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G PS+ L + +CK K + + F +++ + GL ++ +L
Sbjct: 626 MLSCGYAPSL--LKDIKSGVCK-KALSLLRAFSGKTSYDYREKLSR-----NGLSEL-KL 676
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A LF EM++ + I+ + LL A+ K D + +M+++G + ++YSI
Sbjct: 677 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 736
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ FC + + VL M + PN+ T + ++ C ++++ EA L+D+M G
Sbjct: 737 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N ++ + + A+ LI RM + PD TY +V+ L + G D A
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ ME+ P V Y+ ++ GLCK K +++A F+ M +GI P T L + L
Sbjct: 857 LLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 301 VGLG-FLDIIEILADKMER 318
G + D +L+D +ER
Sbjct: 916 CNYGRWSDASRLLSDMIER 934
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + K P++ +S L+ + + + L ++M P + ++ L+ C+
Sbjct: 683 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 742
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EP+ + S ++ +C + I ++D M PN T
Sbjct: 743 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 802
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N +I L + K EA L+D M+ +G PD +Y ++ C R + ++A L+ +M
Sbjct: 803 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 862
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P YN ++ L + D A +++ ME +G P+V TYS ++ LC G+
Sbjct: 863 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRW 921
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + V G L E L D+M +RS +I ++
Sbjct: 922 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981
Query: 331 MRG 333
+ G
Sbjct: 982 ING 984
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L++A LF +M++ + I+ N LL A+ K D + ++M +G D ++++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + +L M + P+ T ++ C+ +V +A L+D+M+E
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YNAI+ C VN A + ++ + P+ TY ++ L R+ A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M K+ P+V TYS ++ K GK+ EA + FE MV I P T L N
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFV-KNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406
Query: 299 RL 300
L
Sbjct: 407 GL 408
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 175/336 (52%), Gaps = 11/336 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++++LCK K V A+Q + +P V T++ L+ G VG+L EA LF EM+ +
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D+ + L++A+CK GNI A ML M G PD +YS + +C N+++
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
V +M R + P+ +YN +I L K + V+EA L EM +G PD +YN+++
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ A +L+ M + D TYN ++ +L + D+A + + ++ +G PS+
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
TY++++ GLC K G+L+ A F+ ++ +G + T ++ N L G + E+L
Sbjct: 445 YTYNILIDGLC-KGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLS 503
Query: 315 KMERST----SCTIQELANAMRGKTGFRKSRSEETE 346
KME + + T + + A+ FRK +E+ E
Sbjct: 504 KMENNGIIPDAVTYETIIRAL-----FRKDENEKAE 534
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 156/301 (51%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G P+ + L++ +C +K A F D+ F +Y L+ GL +GE
Sbjct: 120 ILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGE 179
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A ++ ++ + D++ +N ++ ++CK + +A+ + EM + PD +++
Sbjct: 180 TRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNS 239
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + F + M N+ P+V+T++ ++ LCK+ + A +L M+++G
Sbjct: 240 LILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQG 299
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ +C EVN A + + M++ V P H+YN+++ L ++ D A
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+++ M +G P TY+ ++ GLC K G++ A + + M + GIP Y+S +++
Sbjct: 360 SLFKEMCCKGIAPDTVTYNSLIDGLC-KLGRISYAWQLVDEMHNNGIPADILTYNSLIDV 418
Query: 296 L 296
L
Sbjct: 419 L 419
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 158/309 (51%), Gaps = 13/309 (4%)
Query: 8 PSIYDLDQLLHALCKRKH------VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
PSI + +++L ++ K + + ++HQ TPT+ T++ILV +GE++
Sbjct: 55 PSIVEFNKILGSIVKANNNHYTTAISLSHQL---ELKGITPTIVTFNILVNCYCHLGEMT 111
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +F ++L+ + N+L+ +C G + EA + ++G D SY I
Sbjct: 112 FAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ + + ++L ++ + +V YN II LCK++ V +AYQL EMI + +
Sbjct: 172 NGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++N+++ C ++ A L M +N+ PD +T+++++ L + G RA +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K+G P V TYS ++ G C ++ +A F M G+ P++ + ++ N
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVN-EVNKAKHVFSTMSRLGVAPHAHSYNIMIN--- 347
Query: 302 GLGFLDIIE 310
GLG + +++
Sbjct: 348 GLGKIKMVD 356
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P + L+ C V K H F ++ P +Y+I++ GLG +
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF EM + D + +NSL++ +CK G I A ++ EM + G D +Y+
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + I ++ +K + P+++TYN +I LCK +++ A + +++ +G
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ + W+YN ++ C N A L+++M ++PD TY +++ L R ++A
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAE 534
Query: 240 EVWESMEKRGF 250
++ M RG
Sbjct: 535 KLLREMIIRGL 545
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G+ P + + +++ L K K V A F + P TY+ L+ GL +G
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A +L DEM P DIL +NSL++ +CK +ID+A ++++++ G +P ++Y+I
Sbjct: 390 ISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + V + N +TYN +I LCK EA LL +M G
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
PD +Y I+ + E A +L+ M ++ +H
Sbjct: 510 IIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLLCKH 550
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 171/331 (51%), Gaps = 6/331 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G KP I + ++ +LCK K V A FF + + P V TY+ LV GL +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A +L +M+++K +++ +++LL+A K G + EA + EM + +PD +YS
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + I ++ D M + +V +YN +I CK ++VE+ +L EM +RG
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN ++ +V+ A ++M + PD TYN++L L G ++A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M+KR + TY+ ++ G+CK GK+EEA F + +G+ P T + +
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 300 LVGLGFLDIIEILADKMER----STSCTIQE 326
L G L +E L KM++ CT+ +
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 161/337 (47%), Gaps = 5/337 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
GI+ +Y + +++ C V +A K + P T LV G +S+
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L D+M+E DI+A+N++++++CK +++A +E+ G P+ +Y+ ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C ++ R+L M + + PNV TY+ ++ KN KV EA +L +EM+ +P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y++++ C ++ A ++ M + + D +YN ++ + R + +++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M +RG + TY+ ++ G + G +++A ++F M GI P T +L L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFF-QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 303 LGFLD-IIEILADKMERSTSCTIQELANAMRG--KTG 336
G L+ + I D +R I +RG KTG
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L++A LF +M++ + I+ N LL A+ K D + ++M +G D ++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + +L M + P+ T ++ C+ +V +A L+D+M+E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YNAI+ C VN A + ++ + P+ TY ++ L R+ A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M K+ P+V TYS ++ K GK+ EA + FE MV I P T L N
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFV-KNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 299 RL 300
L
Sbjct: 304 GL 305
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 161/319 (50%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG+K + D + L+ L K K VK AH F K + F P +KTY++L+ G G
Sbjct: 214 MSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEK 273
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L + ++ EML+ D++A+ L+ A CK+G DEA + EM G P Y
Sbjct: 274 DLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYC 333
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ + + K V T N +I C+ + A++++DEM +
Sbjct: 334 MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKS 393
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +Y+ IL + ++ A L RM ++ P+ +TY M++ + R D A
Sbjct: 394 GIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMA 453
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW+ M+++G P + +S +++GLC +LEEAC YF+ M+D+GI P L+
Sbjct: 454 LKVWKQMKEKGVLPCMHMFSALINGLCFDN-RLEEACVYFQEMLDKGIRPPGQLFSNLKE 512
Query: 299 RLVGLGFLDIIEILADKME 317
LV G + + + + ++E
Sbjct: 513 ALVEGGRITLAQEVTQRLE 531
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 159/294 (54%), Gaps = 4/294 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG++P Y LL ALCK VK A + F++ + F ++ ++ L+ G ++
Sbjct: 210 MPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLYGWCREEKM 269
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M E DI+ + +LL AG + +A+ +L++MR G EP+A Y++
Sbjct: 270 MEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVL 329
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C+ + + +V M+RY +V TY ++ CK K+++ Y +LD+MI++G
Sbjct: 330 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGL 389
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P + +Y I+A H + ++ L L+ +M + PD YN+V++L ++G A
Sbjct: 390 MPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVR 449
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG---IPPYSS 291
+W ME G P T+ ++++GL +G L EAC +F+ MV G +P Y +
Sbjct: 450 LWNEMEGNGLSPGADTFVIIINGL-TSQGCLLEACDHFKEMVARGLFSVPQYGT 502
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---E 111
GD G L ++ R C I + S+++ + K G++ EMR E
Sbjct: 125 GDAGNLGYRFFVWAAKQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIE 183
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P+ F + + F A+ + VLD M + L P+ + + C++ LCK+ V++A +L
Sbjct: 184 PELFV--VLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKL 241
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNM-ALRLITRMTKENVMPDRHTYNMVLKLLV 230
++M R P Y L Y R E M A ++ +M + PD Y +L
Sbjct: 242 FEDM--RLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYA 299
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
G+ A ++ + M +RGF P+ + Y+V++ LC K ++EEA K F
Sbjct: 300 NAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALC-KVDRMEEAMKVF 346
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 165/320 (51%), Gaps = 3/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M +FG + + D ++LL LCK ++VK A + FD KH F P +K+Y+IL+ G G
Sbjct: 216 MEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQN 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + +++ EM + D++ L+ A CKA DEA + EM + +P +
Sbjct: 276 LLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCT 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + +K P TYN ++ C + K+ AY+++DEM + G
Sbjct: 336 LINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSG 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y+ IL + + A + RM++E P TY++++++ R D A
Sbjct: 396 VGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMA 455
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++W+ M+ +G P + +S +++ LC + KLE+AC YF+ M+D GI P ++ L+
Sbjct: 456 IQIWDEMKAKGVLPGMHLFSTLINSLCHEH-KLEDACTYFQEMLDVGIRPPATMFSNLKQ 514
Query: 299 RLVGLGFLDIIEILADKMER 318
L+ G D ++A+K+ +
Sbjct: 515 ALLDDGRKDTALLMAEKIXK 534
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
IKPS + L++ L K +K A +FF+ K F P TY+ +V +++ A
Sbjct: 326 IKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAY 385
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHA 123
++ DEM + + ++ +L + K EA+ + + M R G EP +Y I I
Sbjct: 386 RMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRM 445
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ D MK ++P + ++ +I LC K+E+A EM++ G P
Sbjct: 446 FCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPP 505
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
++ + D + AL + ++ K P
Sbjct: 506 ATMFSNLKQALLDDGRKDTALLMAEKIXKLRKAP 539
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 166/308 (53%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + + P ++ + L++ LC ++ A + D ++ + P V +Y+ L+ G + +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA KL +EM E+ + + HN +++ CK G +D+A + +M G PD +Y+
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+A ++ FR +D M R N+ + T N I+R LC+ +K+EEAY+LL +RG
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE SY ++ + V+ AL+L M ++ ++P TYN ++ L + G+ ++A
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + G P +TY+ ++HG C ++G +E+A ++ MV+ P T +L
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYC-REGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 300 LVGLGFLD 307
L G L+
Sbjct: 603 LCMEGMLE 610
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 161/285 (56%), Gaps = 5/285 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK---RKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGD 56
M ++P++ + LL++L + V + + F++A K P V T++I++ G
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ +A + + M + C D + +N++L+A+CK G + +A +L +M+S G P+ +
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNT 280
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I ++ +C+ + V++ M + NL+P+V+TYN +I LC ++EEA++L DEM
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
PD SYN ++ + ++++ A +L+ M+++ V P+ T+N+++K + G+ D
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
A+ ME+ GF P TY+ +++G C K G + EA + + M
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYC-KAGNMGEAFRTMDEM 444
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+KP+ + ++ CK + A + F+P TY+ L+ G G
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + DEM + +D + N++L +C+ ++EA+ +L R G D SY
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ ++ D MK ++P+ TYNCII LC+ K E+A L+E++E G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +YN IL +C +V A + +M + + PD T N++L+ L G ++A
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + +G TY+ ++ LC K+G+L++A M ++ + P T +
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLC-KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 300 LVGLGFLDIIEILADKM 316
L G + E KM
Sbjct: 673 LTDSGRIREAEEFMSKM 689
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 37/328 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M ++ P + +L ALCK+ + A D P TY+ILV G +G
Sbjct: 234 MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + + M + D+ +N L+ +C G I+EA + EM ++ PD SY+
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ E + I F++L+ M + PN T+N +++ CK K+++A + +M E G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR-------- 231
+PD +YN ++ +C + A R + M ++N+ D T N +L+ L R
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 232 ----------------------VGRF-----DRATEVWESMEKRGFYPSVSTYSVMVHGL 264
VG F DRA ++W+ M+++ PS TY+ ++ GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSST 292
C + GK E+A +++ G+ P +T
Sbjct: 534 C-QCGKTEQAISKLNELLESGLLPDETT 560
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 123/242 (50%), Gaps = 3/242 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
L+ +L LC+ K ++ A++ +A+ F V +Y L+ G G + A KL+DEM
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV-SYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
E++ + +N ++ +C+ G ++A L E+ G PD +Y+ +H +C D+
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
F+ + M + P+VFT N ++R LC +E+A +L + + +G D +YN +
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ C ++ A L++ M ++ + PD +TYN ++ L GR A E M ++G
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGX 694
Query: 251 YP 252
P
Sbjct: 695 LP 696
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---NEKVEEAYQLLDEMIE 177
I A+ ++ H F++ MKR L PN+ T N ++ L + + V + + ++ I+
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ ++N ++ +C + A+ + M K N PD TYN +L L + GR
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGD 261
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ M+ RG P+ +TY+++V+G C K G L+EA E+M + P T ML
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYC-KMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 298 NRLVGLGFLDIIEILADKME 317
N L G ++ L D+ME
Sbjct: 321 NGLCNEGRIEEAFKLRDEME 340
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 166/308 (53%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + + P ++ + L++ LC ++ A + D ++ + P V +Y+ L+ G + +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA KL +EM E+ + + HN +++ CK G +D+A + +M G PD +Y+
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+A ++ FR +D M R N+ + T N I+R LC+ +K+EEAY+LL +RG
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE SY ++ + V+ AL+L M ++ ++P TYN ++ L + G+ ++A
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + G P +TY+ ++HG C ++G +E+A ++ MV+ P T +L
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYC-REGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602
Query: 300 LVGLGFLD 307
L G L+
Sbjct: 603 LCMEGVLE 610
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 160/285 (56%), Gaps = 5/285 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK---RKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGD 56
M ++P++ + LL++L + V + + F++A K P V T++I++ G
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ +A + + M + C D + +N++L+ +CK G + +A +L +M+S G P+ +
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNT 280
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I ++ +C+ + V++ M + NL+P+V+TYN +I LC ++EEA++L DEM
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
PD SYN ++ + ++++ A +L+ M+++ V P+ T+N+++K + G+ D
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
A+ ME+ GF P TY+ +++G C K G + EA + + M
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYC-KAGNMGEAFRTMDEM 444
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+KP+ + ++ CK + A + F+P TY+ L+ G G
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + DEM + +D + N++L +C+ ++EA+ +L R G D SY
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ ++ D MK ++P+ TYNCII LC+ K E+A L+E++E G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +YN IL +C +V A + +M + + PD T N++L+ L G ++A
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + +G TY+ ++ LC K+G+L++A M ++ + P T +
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLC-KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 300 LVGLGFLDIIEILADKM 316
L G + E KM
Sbjct: 673 LTDSGRIREAEEFMSKM 689
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 37/328 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M ++ P + +L LCK+ + A D P TY+ILV G +G
Sbjct: 234 MGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + + M + D+ +N L+ +C G I+EA + EM ++ PD SY+
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ E + I F++L+ M + PN T+N +++ CK K+++A + +M E G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR-------- 231
+PD +YN ++ +C + A R + M ++N+ D T N +L+ L R
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 232 ----------------------VGRF-----DRATEVWESMEKRGFYPSVSTYSVMVHGL 264
VG F DRA ++W+ M+++ PS TY+ ++ GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSST 292
C + GK E+A +++ G+ P +T
Sbjct: 534 C-QCGKTEQAISKLNELLESGLLPDETT 560
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 141/324 (43%), Gaps = 61/324 (18%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
L+ +L LC+ K ++ A++ +A+ F V +Y L+ G G + A KL+DEM
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV-SYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
E++ + +N ++ +C+ G ++A L E+ G PD +Y+ +H +C D+
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 131 HSVFRVLDSMKRYNLVPNVFT-----------------------------------YNCI 155
F+ + M + P+VFT YN +
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I LCK ++++A+ LL EM E+ PD ++YNAI+ D + A +++M ++
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGN 694
Query: 216 MPDRH-----------------------TYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+PD+ Y+ +K L G++ A ++ +++G
Sbjct: 695 LPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITV 754
Query: 253 SVSTYSVMVHGLCKKKGKLEEACK 276
STY ++ GL K++ + + +
Sbjct: 755 DKSTYINLMDGLIKRRKSISKEAR 778
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---NEKVEEAYQLLDEMIE 177
I A+ ++ H F++ MKR L PN+ T N ++ L + + V + + ++ I+
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ ++N ++ +C + A+ + M K N PD TYN +L L + GR
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGD 261
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ M+ RG P+ +TY+++V+G C K G L+EA E+M + P T ML
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYC-KMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 298 NRLVGLGFLDIIEILADKME 317
N L G ++ L D+ME
Sbjct: 321 NGLCNEGRIEEAFKLRDEME 340
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 159/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P++ L+ +K A F+ E P V T++ILV G G+
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E + +F M+++ +++ + SL++ C +++A +L M G PD SY+I
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + + M +++P+V TYN +I LCK K+ A +L+DEM +RG
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++IL C +V+ A+ L+T++ + + P+ +TY +++ L + GR + A
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 462
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E + +G+ +V+TY+VM+HG C KG +EA M D P + T E++
Sbjct: 463 NIFEDLLVKGYNITVNTYTVMIHGFC-NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRS 521
Query: 300 L 300
L
Sbjct: 522 L 522
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 8/330 (2%)
Query: 11 YDLDQ-----LLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEAR 64
+ LDQ L+H LCK + A P V YS ++ G+ +++A
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ EM+ + +++ +++L+ G + +A + +M +PD ++++I + F
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + V M + + PNV TY ++ C ++V +A +L M +RG NPD
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN ++ C +V+ A+ L M ++++PD TYN ++ L ++G+ A ++ +
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG P + TYS ++ LCK ++++A + D+GI P T +L + L G
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNH-QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456
Query: 305 FL-DIIEILADKMERSTSCTIQELANAMRG 333
L D I D + + + T+ + G
Sbjct: 457 RLEDAHNIFEDLLVKGYNITVNTYTVMIHG 486
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 150/327 (45%), Gaps = 18/327 (5%)
Query: 8 PSIYDLDQLLHALCKRKH----VKVAHQ----------FFDNAKHE---FTPTVKTYSIL 50
P + +++L +L K KH + ++ Q F H+ + P T++ L
Sbjct: 74 PPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTL 133
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
++GL G++ +A D ++ +D + + +L+ +CK G A +LR +
Sbjct: 134 IKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLV 193
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+P+ YS I C+ ++ F + M + PNV TY+ +I ++++A
Sbjct: 194 QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAID 253
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L ++MI PD +++N ++ C ++ + M K+ + P+ TY ++
Sbjct: 254 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 313
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
V ++A + +M +RG P + +Y++++ G CK K K++EA F+ M + I P
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIK-KVDEAMNLFKEMHHKHIIPDV 372
Query: 291 STVEMLRNRLVGLGFLDIIEILADKME 317
T L + L LG + L D+M
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMH 399
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 171/331 (51%), Gaps = 6/331 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G KP I + ++ +LCK K V A FF + + P V TY+ LV GL +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A +L +M+++K +++ +++LL+A K G + EA + EM + +PD +YS
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C + I ++ D M + +V +YN +I CK ++VE+ +L EM +RG
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN ++ +V+ A ++M + PD TYN++L L G ++A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M+KR + TY+ ++ G+CK GK+EEA F + +G+ P T + +
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 300 LVGLGFLDIIEILADKMER----STSCTIQE 326
L G L +E L KM++ CT+ +
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 161/337 (47%), Gaps = 5/337 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
GI+ +Y + +++ C V +A K + P T LV G +S+
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L D+M+E DI+A+N++++++CK +++A +E+ G P+ +Y+ ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C ++ R+L M + + PNV TY+ ++ KN KV EA +L +EM+ +P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y++++ C ++ A ++ M + + D +YN ++ + R + +++
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M +RG + TY+ ++ G + G +++A ++F M GI P T +L L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFF-QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 303 LGFLD-IIEILADKMERSTSCTIQELANAMRG--KTG 336
G L+ + I D +R I +RG KTG
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L++A LF +M++ + I+ N LL A+ K D + ++M +G D ++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + +L M + P+ T ++ C+ +V +A L+D+M+E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YNAI+ C VN A + ++ + P+ TY ++ L R+ A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ M K+ P+V TYS ++ K GK+ EA + FE MV I P YSS V
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFV-KNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303
Query: 295 ML 296
L
Sbjct: 304 GL 305
>gi|226497014|ref|NP_001152455.1| GTP binding protein [Zea mays]
gi|195656487|gb|ACG47711.1| GTP binding protein [Zea mays]
Length = 455
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M F P++ DL LL L V+ A FF + +F + KTY+IL+ G V
Sbjct: 176 MERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFDLSAKTYTILISGWAVVASP 235
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSI 119
+A+KLFDEM+ER D+ A+N+L++A+C+ G++ A L++M RS G PDA +Y
Sbjct: 236 VKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGP 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ + C + D + RVLD M+ +L PNVFTYN +IR LC+ +V+E+Y +L+EM G
Sbjct: 296 FLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDESYNILNEMATYG 355
Query: 180 ANPDEWSYNAILAYHCDRAEVNM 202
PD WSYN +L HC E M
Sbjct: 356 EKPDVWSYNTLLNTHCKLKEAIM 378
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH-NSLLEAMCKAGNIDEAHGMLREM 105
+ +L R G +A + F M ER C + +A +SLL + G ++ A RE
Sbjct: 153 FPLLFRAYARAGLPEDAIRAFSSM-ERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRE- 210
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ A +Y+I I + ++ D M + P+V YN +I LC+ V
Sbjct: 211 SPFQFDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDV 270
Query: 166 EEAY-QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
A QL D RG PD +Y L C + ALR++ RM ++ P+ TYN
Sbjct: 271 ALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNA 330
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
V++LL +G D + + M G P V +Y+ +++ CK K
Sbjct: 331 VIRLLCELGEVDESYNILNEMATYGEKPDVWSYNTLLNTHCKLK 374
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G P+ + ++ LC++ + A Q F + + P +Y IL+ GL G+
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGK 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA KLF ML+ + +N ++ MC A +DEA + + MRS G P F+++I
Sbjct: 201 LNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + FR+L M VP+V TY+ +I LC +V++A LL++M++R
Sbjct: 261 LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + N ++ C + A ++ M PD TYN ++ R G+ +RA
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M RG P+V TY+ +V GLCK +L EAC F M G P
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAP 428
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 151/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G PS + ++ A CKR ++ A + P V TY+ ++ GL G + EA
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEA 134
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF+EM C + +HN+++ +C+ ID+A + EM + PD++SY I I
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A ++ +++ M + P+ TYN +I +C ++EA +L M +G P
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N ++ HC R +++ A RL+ RMT + +PD TY+ ++ L + R D A + E
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M KR P+V T + ++HGLC K G+++EA + + MV G P T L
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLC-KAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 161/326 (49%), Gaps = 3/326 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E + P + L+ L K + A F H TP+ Y+ L+ GL
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+AR+LF +M R CP + +N +++A CK G ++EA ++++M G PD +Y+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C++ + + + M+R PN ++N II LC+ K+++A Q+ EM R
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD WSY ++ ++N A +L RM + P TYN+V+ + D A
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+++SM +G PS T+++++ C K+GK++EA + + M D+G P T L +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHC-KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 300 LVGLGFLDIIE-ILADKMERSTSCTI 324
L + +D +L D ++R T+
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTV 325
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +PS + + L+ A CKR + A + + P V TYS L+ GL + + +A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L ++M++R+C ++ N+L+ +CKAG I EA +L M S G PD +Y+ +H
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A +L M L PNV TY ++ LCK ++ EA + +M G P+
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW- 242
++Y A++ C +V+ L+L M + PD Y + L + GR RA E+
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 243 ---ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
ES+ + V Y V GL GK+E A + MV G P
Sbjct: 490 EGRESLRSEAWGDEV--YRFAVDGLL-DAGKMEMALGFVRDMVRGGQLP 535
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+ L K + A++ F TP+ TY++++ G+ L EA
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF M + C N L++A CK G +DEA +L+ M G PD +YS I
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ M + P V T N +I LCK +++EA ++LD M+ G +PD
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ HC + A L++ M + P+ TY ++ L + R A V+
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+ G P++ TY+ ++ G C G+++ K F MV GI P
Sbjct: 421 MKSSGCAPNLFTYTALILGFC-SAGQVDGGLKLFGEMVCAGISP 463
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 171/377 (45%), Gaps = 40/377 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ P+ + L+ LCK V+ A + + P V T++ L++GL
Sbjct: 377 MILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNN 436
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +LF+EM + C D +N L++++C G ++EA +L+EM S G + +Y+
Sbjct: 437 HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNT 496
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ I + D M+ + NV TYN +I LCKN +VEEA QL+D+M+ G
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR-------------------- 219
PD+++YN++L Y C ++ A ++ MT PD
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELAS 616
Query: 220 ---------------HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
TYN V+K L R R A ++ M ++G P TY V+ GL
Sbjct: 617 RLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
C G + EA + M D+G P S+ ML L L D + L +++ + + +
Sbjct: 677 CSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSD 736
Query: 325 QELANAMRGKTGFRKSR 341
E++ M GF K R
Sbjct: 737 SEVSMIM----GFLKIR 749
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GIKP + + L+ ALC+ ++ A + + +P KT++ L++G + G
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A ++ ++M+ CP + N L+ CK G I+E + EM + G PD F+++
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C + +LD M + P++FTYN +I LCK +VEEA ++L++MI R
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN +++ C +V A L +T + ++PD T+N +++ L A
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E++E M+ +G +P TY++++ LC +G+LEEA + M G
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLC-SRGRLEEALSLLKEMESSG 486
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G S ++ L+H CK ++ F D +E F P T++ LV GL +G
Sbjct: 272 MVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGH 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ D ML+ DI +NSL+ +CK G ++EA +L +M P+ +Y+
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNT 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ N + + + ++P+V T+N +I+ LC A +L +EM +G
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PDE++YN ++ C R + AL L+ M + TYN ++ + R + A
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+++ ME +G +V TY+ ++ GLCK + ++EEA + + M+ EG+ P
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNR-RVEEAAQLMDQMLMEGLKP 559
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 151/318 (47%), Gaps = 37/318 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + + L++ LC+ HVK A + D E F P + TY+ L+ GL +GE+ EA
Sbjct: 311 GFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEA 370
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ ++M+ R + + +N+L+ +CK ++EA + R + S G PD +++ I
Sbjct: 371 VEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 430
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL------------------------ 159
C N+ + + MK P+ FTYN +I L
Sbjct: 431 LCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRN 490
Query: 160 -----------CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
CKN+++EEA ++ DEM +G + + +YN ++ C V A +L+
Sbjct: 491 VVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMD 550
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + PD+ TYN +L R G +A ++ ++M G P TY ++ GL K
Sbjct: 551 QMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL-SKA 609
Query: 269 GKLEEACKYFEMMVDEGI 286
G++E A + + +G+
Sbjct: 610 GRVELASRLLRTVQLKGM 627
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L+ L D +L + M+ R D+ N L++A+C+A I A M+ EM
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G PD +++ + F E +++ R+ + M + T N ++ CK ++
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EE +DEM G PD +++N+++ C V AL ++ M +E PD TYN +
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L ++G + A E+ M R F P+ TY+ ++ LCK+ ++EEA + ++ +G
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN-QVEEATELARVLTSKG 416
Query: 286 IPP 288
I P
Sbjct: 417 ILP 419
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 142/331 (42%), Gaps = 39/331 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARK 65
P + QL AL ++ D A + F P+ Y ++R LG G R+
Sbjct: 67 PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAF 124
+ EM C + L+E+ K DEA ++ M G + DAF+Y+ ++
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ N + V V M + P+V T+N +I+ LC+ ++ A +++EM G +PDE
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246
Query: 185 WSYNAILAYHCDRAEVNMALRL-----------------------------------ITR 209
++ ++ + +N ALR+ I
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M+ E PDR T+N ++ L R+G A E+ + M + GF P + TY+ ++ GLC K G
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLC-KLG 365
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++EEA + M+ P + T L + L
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTL 396
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 42/261 (16%)
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLD-SMKRYNLVPNVFTYNCIIRKLCKN-------- 162
P F+ A +D S+ +LD + K+ N VP+ Y ++RKL K+
Sbjct: 67 PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126
Query: 163 ---------------------------EKVEEAYQLLDEMIER-GANPDEWSYNAILAYH 194
E +EA ++D M E G D ++YN +L
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
D ++ + + +RM + PD T+N+++K L R + A + E M G P
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIE 310
T++ ++ G ++G + A + E MV G P + TV +L + G L I+
Sbjct: 247 KTFTTLMQGFI-EEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305
Query: 311 ILADKMERSTSCTIQELANAM 331
++++ R T L N +
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGL 326
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 164/316 (51%), Gaps = 1/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G K + ++ LL +L K K A F+ K FTP+++TY+IL+ G + L
Sbjct: 298 MKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNL 357
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EM++R D++AHN +LE + K +A + M++ G P+ SY+I
Sbjct: 358 LEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIM 417
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + D M P+ Y C+I + +K++ Y LL EM ERG
Sbjct: 418 IQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGC 477
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ + + A+R+ +M + + P HTYNM++K ++ E
Sbjct: 478 PPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHE 537
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+W+ M ++G P ++Y V + GL ++ + EACKY E M+++G+ + +
Sbjct: 538 IWDEMHQKGCCPDDNSYIVYIGGLIRQD-RSGEACKYLEEMLEKGMKAPKLDYNKFASDI 596
Query: 301 VGLGFLDIIEILADKM 316
G I+E LA KM
Sbjct: 597 SKTGNAVILEELARKM 612
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 89 MCKAGNIDEAHGMLREMRSIGAEP--DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
MC G + M+ + +G + ++SI I AF EA + D MK+Y
Sbjct: 245 MCVLGRTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFK 304
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
V N ++ L + +EA + +++ +R P +Y +L+ C + A R+
Sbjct: 305 VGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTYTILLSGWCRLKNLLEAGRV 363
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M PD +N++L+ L++ + A +++E M+ +G P+V +Y++M+ CK
Sbjct: 364 WNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCK 423
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+K + EA +YF++MVD G P ++ L + G G
Sbjct: 424 QK-LMGEAIEYFDVMVDRGCQPDAALYTCL---ITGFG 457
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 38/183 (20%)
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY------- 193
KR + TYN ++ L + + E +L+EM E+G E AI A+
Sbjct: 230 KRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFAEAKQRK 289
Query: 194 --------------------------HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A++ + + K+ P TY ++L
Sbjct: 290 KAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLS 349
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEG 285
R+ A VW M RGF P V ++VM+ GL CKKK +A K FE+M +G
Sbjct: 350 GWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKK---SDAIKLFEIMKAKG 406
Query: 286 IPP 288
P
Sbjct: 407 PSP 409
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GIKP+I+ + ++ + K+ ++ H+ +D + P +Y + + GL
Sbjct: 507 MIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDR 566
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
EA K +EMLE+ L +N + K GN + R+M +G
Sbjct: 567 SGEACKYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEELARKMNFVG 616
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 162/319 (50%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG+K + D + L+ L K K VK A + K + F P +KTY++L+ G G
Sbjct: 221 MSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEK 280
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L + ++ EM++ D++A+ L+ A CK+G DEA + EM + G P Y
Sbjct: 281 DLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYC 340
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ + + + K+ V T N ++ C+ K + A++++DEM +
Sbjct: 341 MLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKC 400
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y+ IL Y + A + RM + P +TY M++ + GR D A
Sbjct: 401 KVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMA 460
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW+ M ++G P + +S +++GLC + +LEEAC YF+ M+D+GI P L+
Sbjct: 461 LKVWKQMGEKGVLPCMHMFSALINGLCFEN-RLEEACVYFQEMLDKGIRPPGQLFSNLKE 519
Query: 299 RLVGLGFLDIIEILADKME 317
LV G + + + +A K++
Sbjct: 520 ALVQGGRISLAQEVALKLD 538
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 57/223 (25%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF------------TYNCIIRKLC 160
+ FSY+ A H++ L +K++ LV ++ T+ I+R+
Sbjct: 155 EGFSYT--------AEGFHNLIEALGKIKQFRLVWSLVETMRCRGLLSKDTFKLIVRRYA 206
Query: 161 KNEKVEEAYQLLDEMIERGAN------------------------------------PDE 184
+ KV+EA + ++M G PD
Sbjct: 207 RARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDL 266
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ ++ M + M + PD Y M++ + G+ D A +V+
Sbjct: 267 KTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYE 326
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
ME G PS Y ++++GL ++ +L+EA KYFE G P
Sbjct: 327 MEASGCMPSPHVYCMLINGLGSEE-RLDEALKYFEHYKKSGFP 368
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G P ++ L++ LCK+ A + ++ + P + TY+IL+ G G+
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + EML + ++ + +N+L+ A+CK G I EA M EM S G +PD F+++
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +++ + M ++ N T+N +I + +++EA +L+++M+ RG
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE +YN ++ C V L L M ++ + P T N+++ G+ A
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E M RGF P + TY+ +++GLC K+G+++EA FE + EGI P S T L
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLC-KRGRIQEALNLFEKLQAEGIQPDSITYNTL 668
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 16/361 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P+ L+H LCK + A P V ++ LV G G L
Sbjct: 306 MILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG---PNVVHFNTLVNGFVRNGRL 362
Query: 61 SEARK-LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA ++D+M+ D+ ++L+ +CK G A ++ +M + G +P+ +Y+I
Sbjct: 363 NEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTI 422
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + +L M N YN +I LCK+ K+ EA + EM +G
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++N+++ C E+ AL L M E V+ + T+N ++ +R G A
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M RG TY+ ++ LC K G +E+ FE M+ +G+ P T +L N
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALC-KTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601
Query: 300 LVGLGFL-DIIEILADKMERSTS---CTIQELANAM--RGKTG-----FRKSRSEETELE 348
G + + +E + D + R S T L N + RG+ F K ++E + +
Sbjct: 602 FCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661
Query: 349 S 349
S
Sbjct: 662 S 662
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G + + L+ ALCK + A F + + P + T++ L+ GL V E
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L+ +M+ + + N+L+ A + G I EA ++ +M G D +Y+
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + + M R L P++ T N +I C KV A + + +MI RG
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN+++ C R + AL L ++ E + PD TYN ++ L R G FD A
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+ + GF P+ T++++V+ K+ + Y
Sbjct: 683 FLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITY 720
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+PS + +L L VA F+D +P T+ ++++ L V E+ A
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +M + C + + + +L++A+ K +DEA +L EM +G PD +++ I+ FC
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
N + +++D M PN TY ++ LCK +++EA LL ++ P+
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVV 347
Query: 186 SYNAILAYHCDRAEVNMALRLI-TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+N ++ +N A + +M +PD T++ ++ L + G F A E+
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M+ +G P+++TY++++ G C KKG+LEEA M+ +G
Sbjct: 408 MDAKGCKPNLNTYTILIDGFC-KKGQLEEAGLILREMLTKGF 448
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ ++++ G G +A +L +M C ++N +L+ + A + +M
Sbjct: 142 FILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDM 201
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P+ +++ + + A C N++ + +L M ++ VPN Y +I L K ++V
Sbjct: 202 LSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRV 261
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY--- 222
+EA +LL+EM G PD ++N ++ C V +L+ RM + P+ TY
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 223 ----------------------------NMVLKLLVRVGRFDRATE-VWESMEKRGFYPS 253
N ++ VR GR + AT V++ M G+ P
Sbjct: 322 MHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPD 381
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V T+S +V+GLC KKG A + M +G P +T +L
Sbjct: 382 VFTFSTLVNGLC-KKGLFGSALELVNDMDAKGCKPNLNTYTIL 423
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 50/363 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G +P Y + L+ C+ V VA FD F V +Y+ L+ GL + G
Sbjct: 179 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-- 117
+ EA +LF EM + D+ + +L++ +C A +E MLR M+ +G P +Y
Sbjct: 239 IDEAVELFGEMDQP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 294
Query: 118 ---------------------------------SIFIHAFCEANDIHSVFRVLDSMKRYN 144
+ I+A+C+ + RVL+ MK
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV+TYN +++ C KV +A LL++M G NPD +YN ++ C + A
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + ++ D++TYN ++ L + GR D+A +++S+E RG P+ T++ +++GL
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML---RNRLVGLGFLDIIEILADKME 317
C K GK + A K+ E MV G P YSS +E L + GL F I E+L ++
Sbjct: 475 C-KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF--IGEMLQKDVK 531
Query: 318 RST 320
ST
Sbjct: 532 PST 534
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G +PS ++ C+ + K A + + P V T + ++ G
Sbjct: 280 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 339
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A ++ + M R C ++ +N+L++ C G + +A +L +MR+ G PDA +Y++
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C I S FR+L M+ L+ + +TYN +I LCK+ + ++A L D + RG
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+++ C + ++A + + +M PD +TY+ ++ L ++
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++ PS Y++++H L K++ A + E MV G P
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE-MVSSGCNP 567
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + +++A CK + A + + K P V TY+ LV+G + G+
Sbjct: 315 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 374
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ +A L ++M R C V D + +N L+ C G+I+ A +LR M G D ++Y
Sbjct: 375 VHKAMTLLNKM--RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 432
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+A C+ + DS++ + PN T+N +I LCK+ K + A++ L++M+
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD ++Y++ + + C L I M +++V P Y +V+ L++ +
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
W M G P V TY+ + C +G+L EA M G+
Sbjct: 553 VARTWGEMVSSGCNPDVVTYTTSMRAYC-IEGRLNEAENVLMEMSKNGV 600
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 146/348 (41%), Gaps = 68/348 (19%)
Query: 42 PTVKTYSILVRGLGDVGELSE-----------------------------------ARKL 66
PT TY+ ++R L +L+ AR L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------------HG 100
FD+M R D++++ +L+E +C+AG IDEA G
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERG 270
Query: 101 -----MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
MLR M+ +G P +Y+ + C +L M L P V T +
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I CK ++ +A ++L+ M RG P+ W+YNA++ C+ +V+ A+ L+ +M V
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD TYN++++ G + A + ME G TY+ +++ LC K G+ ++AC
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC-KDGRTDQAC 449
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
F+ + GI P + T L N L G DI +KM S CT
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV-SAGCT 496
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 1/265 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ C H++ A + + + TY+ L+ L G +A
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 448
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LFD + R + + NSL+ +CK+G D A L +M S G PD ++YS FI
Sbjct: 449 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEH 508
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + M + ++ P+ Y +I KL K + EM+ G NPD
Sbjct: 509 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 568
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y + +C +N A ++ M+K V D YN ++ +G+ D A + +
Sbjct: 569 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 628
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK 268
M P+ TY +++ L + +
Sbjct: 629 QMTSVASVPNQFTYFILLRHLVRMR 653
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 18/285 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KPS + ++H L K R + VA + + P V TY+ +R G
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA + EM + VD +A+N+L++ G D A +L++M S+ + P+ F+Y I
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644
Query: 120 FIH-----------------AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+ +A ++ VF + D MK+ +PN TY+ I+ ++
Sbjct: 645 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 704
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ EEA L+ M E + +E Y A++ C A L+ M + +P +Y
Sbjct: 705 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 764
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+L L+ G+ D+A E++ + + + P + V++ GL KK
Sbjct: 765 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 809
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 63 ARKLFDEMLERKCPVDIL-AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +LF M P +N+++ ++C+ ++ A L M G PDA++++ I
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+C N + + D M +V +Y +I LC+ +++EA +L EM +
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ---- 251
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD Y A++ C+ L ++ RM + P Y V+ R + A E+
Sbjct: 252 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 311
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M ++G P V T + +++ C K+G++ +A + E+M G P T L
Sbjct: 312 LQEMFEKGLAPCVVTCTAVINAYC-KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370
Query: 302 GLGFLDIIEILADKM 316
G + L +KM
Sbjct: 371 NEGKVHKAMTLLNKM 385
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 162/301 (53%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G++PS+ + +++ LCK ++ A + FD A+ TP +Y+ LV G G
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +F EM ++ D++ SL+ AMC+AGN++ A ++ +MR G + F+++
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + M+ + P+V YN +I CK +++EA +L+ EM +G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ IL+ +C + + A L +M K+ V+PD TY+ +++ L R A
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E M + G P TY+ ++ G C K+G +++A + M+ +G+ P T +L +
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHC-KEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514
Query: 300 L 300
L
Sbjct: 515 L 515
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 149/302 (49%), Gaps = 7/302 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVG 58
M+ G+ P++Y + L+ ALC R + A D P V TY+ LV G
Sbjct: 145 MLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
E+ A +L M E ++ N+++ +CKAG +++A M EM G PD SY+
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C+A +H V M + +VP+V T+ +I +C+ +E A L+ +M ER
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER 324
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +E+++ A++ C ++ AL + M + + P YN+++ ++GR D A
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEA 384
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ ME +G P V TYS ++ G C K G + A + M+ +G+ P YSS +
Sbjct: 385 RELIHEMEAKGMKPDVVTYSTILSGYC-KIGDTDSAFELNRKMLKKGVVPDAITYSSLIR 443
Query: 295 ML 296
L
Sbjct: 444 GL 445
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 63/355 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK------HEFTPTVKTYSILVRGL 54
M + G+ P + L+HA+C+ +++ A + +EFT ++ L+ G
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT-----FTALIDGF 340
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G L +A EM E + ++ +N L+ CK G +DEA ++ EM + G +PD
Sbjct: 341 CRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDV 400
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+YS + +C+ D S F + M + +VP+ TY+ +IR LC+ ++ +A +L ++
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEK 460
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL-------- 226
M++ G PDE++Y ++ HC V AL L M K+ V+PD TY++++
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSAR 520
Query: 227 -----KLLVRV-------------------------------------GRFDRATEVWES 244
+LL ++ G ++A +V++S
Sbjct: 521 TKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQS 580
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
M R + S YSV++HG C + G + +A + + ++ G P S ST+ ++R
Sbjct: 581 MLDRHWKLDGSVYSVLIHGHC-RGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG 634
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 145/279 (51%), Gaps = 3/279 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P++ Y+ ++ L D L AR+L ML ++ +N L+ A+C G +EA
Sbjct: 116 YAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174
Query: 100 GMLR-EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
G++ +MR G P+ +Y+ + AFC A ++ + R++ M+ + P++ T+N ++
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LCK ++E+A ++ DEM G PD SYN +++ +C ++ AL + M ++ V+PD
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
T+ ++ + R G +RA + M +RG + T++ ++ G C + G L++A
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC-RNGFLDDALLAM 353
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ M + I P +L N LG +D L +ME
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P +Y+ + A +A+ + S R+L SM R + PNV+TYN ++R LC + EEA
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 169 YQLL-DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
++ D+M G P+ +YN ++A C EV+ A RL+ M + V P T+N V+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + GR + A ++++ M + G P +Y+ +V G C K G L EA F M +G+
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYC-KAGCLHEALAVFAEMAQKGVV 292
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P T L + + G L+ L +M
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQM 321
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 16/207 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ CK +V+ A D K P V TYS+L+ GL
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSAR 520
Query: 60 LSEARKL-FDEMLERKCPVDI----LAHN----------SLLEAMCKAGNIDEAHGMLRE 104
EA++L F E P +I L H +LL+ G +++A + +
Sbjct: 521 TKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQS 580
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M + D YS+ IH C +I + R PN + ++R L +
Sbjct: 581 MLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGM 640
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAIL 191
EA ++ E++ + D + A++
Sbjct: 641 TVEADNVIQELLNCCSLADAETSKALI 667
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 161/317 (50%), Gaps = 1/317 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI P + ++ LC V A + + + P+V TY+ILV L +S+A
Sbjct: 197 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDAS 256
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ ++M+E C +++ +N+L+ CK GN+DEA + +M PD F+Y+I I +
Sbjct: 257 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 316
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++L M +Y PN TYN ++ L K+ K +A+ L M+ R P
Sbjct: 317 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 376
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++N ++ C ++++A L MT +PD +TYN+++ R R D A ++ E
Sbjct: 377 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 436
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + G P V TY+ +V GLCK +++EA + +E++ + G T L + L
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKAS-QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 495
Query: 305 FLDIIEILADKMERSTS 321
LD E L +MER+ S
Sbjct: 496 RLDDAEKLLREMERNGS 512
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 151/338 (44%), Gaps = 37/338 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ KPS + + ++ CK + +A++ F P + TY+I++ G
Sbjct: 367 MLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANR 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH-------------------- 99
+ +AR+L + M E CP D++ +NS++ +CKA +DEA+
Sbjct: 427 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 486
Query: 100 ---------------GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+LREM G+ PD +Y+I IH FC+A+ + M
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
VP V TY+ +I KLCK+ +V + LL M+ERG PD Y +++ C + A
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + P TYN+++ L +V R D A + E ME G P TY+ + G
Sbjct: 607 ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
K + ++A + F+ M G P +L +LV
Sbjct: 667 -WKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVA 703
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 156/329 (47%), Gaps = 37/329 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ L+ ALCK + A D + P V TY+ L+ G +G + EA L
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F++MLE C D+ +N L++ CK + +L+EM G EP+ +Y+ + + +
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F + M R + P+ FT+N +I CK +++ AY+L M +RG PD ++
Sbjct: 354 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 413
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE--- 243
YN +++ C ++ A +L+ RMT+ PD TYN ++ L + + D A EV+E
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Query: 244 --------------------------------SMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
ME+ G P V Y++++HG CK +L
Sbjct: 474 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD-QL 532
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++ +F M+D+G P T ++ ++L
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKL 561
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 59/360 (16%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G K S + + LL A ++K + A+ F N + +P TYS L+ G + +A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 64 RKLFDEM----------------------------------LERKCPVDILAHNSLLEAM 89
+L DEM ++R C ++ + L++A+
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDAL 246
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
CK+ I +A +L +M G P+ +Y+ I+ FC+ ++ + + M + P+V
Sbjct: 247 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV 306
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
FTYN +I CK E+ ++ +LL EM++ G P+ +YN ++ + A L
Sbjct: 307 FTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQM 366
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + + P T+N+++ + +VG+ D A E+++ M RG P + TY++M+ G C+
Sbjct: 367 MLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN- 425
Query: 270 KLEEACKYFEMMVDEGIPP----YSSTV----------------EMLRNRLVGLGFLDII 309
++++A + E M + G PP Y+S V E+LRN G FLD++
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN---GGYFLDVV 482
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV++G +P+ + L+ +L K K++ + + + P+ T+++++ VG+
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQ 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF M +R C DI +N ++ C+A ID+A +L M G PD +Y+
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A+ + + V + ++ +V T + +I LCK+ ++++A +LL EM G
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ PD +Y ++ C +++ +L + M + +P TY++V+ L + R
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++M +RG P Y+ ++ GLCK +EA + +++M G P T +L ++
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSD-SYDEAYELYKLMKQTGCAPTVVTYNVLVDK 630
Query: 300 LVGLGFLD 307
L + LD
Sbjct: 631 LCKVSRLD 638
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 1/235 (0%)
Query: 16 LLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ LCK + + A + + ++ P V Y+IL+ G +L ++ F EML++
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C ++ ++ +++ +CK+ + + +L+ M G PDA Y+ I C+++ +
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ MK+ P V TYN ++ KLCK +++EA LL+ M G PD +YN++
Sbjct: 607 ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
AE + A RL M P Y+++L LV + D+A E+WE + G
Sbjct: 667 WKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
S++ R L + +L +A K FD + N LL A + EA+ + + R
Sbjct: 100 SVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHR 159
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
PD+ +YS I+ FC+A D +R+LD M++ +VP+ YN II+ LC N +V+
Sbjct: 160 CGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVD 219
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A +M +R P +Y ++ C A ++ A ++ M + P+ TYN ++
Sbjct: 220 SALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 278
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++G D A ++ M + P V TY++++ G CK++ + ++ K + MV G
Sbjct: 279 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE-RPQDGAKLLQEMVKYGC 337
Query: 287 PPYSSTVEMLRNRLVGLG 304
P T L + LV G
Sbjct: 338 EPNFITYNTLMDSLVKSG 355
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ ++ LCK V+ + TP Y+ ++ GL
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L+ M + C ++ +N L++ +CK +DEA +L M S G PD +Y+
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F ++ + FR+ +MK P F Y+ ++ KL EK+++A ++ +E +E G
Sbjct: 662 VFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Query: 180 ANPD 183
A+ D
Sbjct: 722 ADVD 725
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 161/317 (50%), Gaps = 1/317 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI P + ++ LC V A + + + P+V TY+ILV L +S+A
Sbjct: 63 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDAS 122
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ ++M+E C +++ +N+L+ CK GN+DEA + +M PD F+Y+I I +
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++L M +Y PN TYN ++ L K+ K +A+ L M+ R P
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++N ++ C ++++A L MT +PD +TYN+++ R R D A ++ E
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + G P V TY+ +V GLCK +++EA + +E++ + G T L + L
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKAS-QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361
Query: 305 FLDIIEILADKMERSTS 321
LD E L +MER+ S
Sbjct: 362 RLDDAEKLLREMERNGS 378
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 156/329 (47%), Gaps = 37/329 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ L+ ALCK + A D + P V TY+ L+ G +G + EA L
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F++MLE C D+ +N L++ CK + +L+EM G EP+ +Y+ + + +
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F + M R + P+ FT+N +I CK +++ AY+L M +RG PD ++
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE--- 243
YN +++ C ++ A +L+ RMT+ PD TYN ++ L + + D A EV+E
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Query: 244 --------------------------------SMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
ME+ G P V Y++++HG CK +L
Sbjct: 340 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD-QL 398
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++ +F M+D+G P T ++ ++L
Sbjct: 399 DKSLAFFSEMLDKGCVPTVITYSIVIDKL 427
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 161/349 (46%), Gaps = 59/349 (16%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARKLFDEM---- 70
LL A ++K + A+ F N +P TYS L+ G + +A +L DEM
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 71 ------------------------------LERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
++R C ++ + L++A+CK+ I +A
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASL 123
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L +M G P+ +Y+ I+ FC+ ++ + + M + P+VFTYN +I C
Sbjct: 124 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 183
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K E+ ++ +LL EM++ G P+ +YN ++ + A L M + + P
Sbjct: 184 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 243
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
T+N+++ + +VG+ D A E+++ M RG P + TY++M+ G C+ ++++A + E
Sbjct: 244 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN-RIDDARQLLER 302
Query: 281 MVDEGIPP----YSSTV----------------EMLRNRLVGLGFLDII 309
M + G PP Y+S V E+LRN G FLD++
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN---GGYFLDVV 348
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E P ++ + L+ CK++ + + K+ P TY+ L+ L G+
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 222
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L ML R C N +++ CK G +D A+ + + M G PD ++Y+I
Sbjct: 223 YIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNI 282
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C AN I ++L+ M P+V TYN I+ LCK +V+EAY++ + + G
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + + ++ C ++ A +L+ M + PD Y +++ + + D++
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 402
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M +G P+V TYS+++ LC K ++ + C + M++ G+
Sbjct: 403 AFFSEMLDKGCVPTVITYSIVIDKLC-KSARVRDGCMLLKTMLERGV 448
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N LL A + EA+ + + PD+ +YS I+ FC+A D +R+LD M++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+VP+ YN II+ LC N +V+ A +M +R P +Y ++ C A ++
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A ++ M + P+ TYN ++ ++G D A ++ M + P V TY++++
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G CK++ + ++ K + MV G P T L + LV G
Sbjct: 181 GYCKQE-RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G++P+ LL+ LC + + A + FD K F P++ TY+ +++GL +G
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M E+ C D++A+N++++++CK +EA EM G P+ +YS
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC ++ + M N++PN T+ ++ LCK + EA ++ + M E G
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+A++ +C +++++ A +L M + P YN+++ + R + A
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M R P TYS ++ G C + G+ + A K F+ M G+ P S T +L +
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFC-QAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430
Query: 300 LVGLGFLDIIEILADKMERS 319
L G LD L M+ S
Sbjct: 431 LCKHGHLDEAFRLLKAMQES 450
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 154/306 (50%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G KP + + ++ +LCK + A FF P V TYS ++ G ++G+
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA LF +M+ R + + L++ +CK G I EA + M G EPDA++YS
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C + + ++ D M P+V YN +I CK+ ++ EA LL EM +R
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C +A +L M ++PD TY+++L L + G D A
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++M++ P + Y++++ G+C GKLE A + F + +GI P T ++ +
Sbjct: 442 RLLKAMQESKIEPHICIYNILIQGMC-NFGKLEAARELFSNLFVKGIQPSVVTYTVMISG 500
Query: 300 LVGLGF 305
L+ G
Sbjct: 501 LLKEGL 506
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P Y L+ C + + A + FD F P+V+ Y+IL+ G
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA+ L EM +R D + +++L++ C+AG A + +EM S G PD+ +YSI
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + FR+L +M+ + P++ YN +I+ +C K+E A +L + +G
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y +++ N A + +M +P+ TYN+ ++ +R G A
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ E M RGF ST+ +++
Sbjct: 547 RLIEEMVGRGFSADSSTFQMLL 568
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ + P+ L+ LCK + A + F+ ++ P TYS L+ G +
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+KLFD M+ + + +N L+ CK+ ++EA +L EM PD +YS
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+A ++ M Y L+P+ TY+ ++ LCK+ ++EA++LL M E
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P YN ++ C+ ++ A L + + + + P TY +++ L++ G + A
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E++ M G P+ TY+V + G + G A + E MV G SST +ML
Sbjct: 512 EMFRKMVVNGCLPNSCTYNVAIQGFL-RNGDPSNAVRLIEEMVGRGFSADSSTFQML 567
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 5/215 (2%)
Query: 85 LLEAMCKAGNIDEAH---GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
L+ +C + N D H L +M +G +P ++ ++ C I ++ D +
Sbjct: 110 LINCLCHS-NRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ P++ TY II+ LCK A QLL +M E+G PD +YN ++ C N
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A+ + M + + P+ TY+ +L +G+ + AT +++ M R P+ T++++V
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
GLC K+G + EA + FEMM + G+ P + T L
Sbjct: 289 DGLC-KEGMILEARRVFEMMTENGVEPDAYTYSAL 322
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G PS+ + L++ CK + + A + TP TYS L++G G
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+KLF EM D + ++ LL+ +CK G++DEA +L+ M+ EP Y+I
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + ++ + P+V TY +I L K EA ++ +M+ G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P+ +YN + + + A+RLI M D T+ M+L L
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
++ +A ++ I P ++ + + + +V + M N+ PNV+T
Sbjct: 49 SVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLT 108
Query: 154 CIIRKLCKNEK--VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+I LC + + V A+ L +M + G P ++ +L C +A++ A++L +
Sbjct: 109 ILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K P TY ++K L ++G A ++ + ME++G P V Y+ ++ LCK + +
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR-RA 227
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
EA +F MVD+GIPP T + + LG L+
Sbjct: 228 NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLN 263
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P + L+ C +K A F+ E P V T++ILV G+
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E + +FD M+++ + + +NSL++ C +++A + M G PD SYSI
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + M R N++P+V TY+ +I L K+ ++ A QL+D+M +RG
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+IL C +V+ A+ L+T+ + PD TY++++K L + G+ + A
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V+E + +G+ V Y++M+ G C +G EA M D G P + T E++
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFC-VEGLFNEALALLSKMEDNGCIPDAKTYEII 546
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G P L LC + ++ A F D F +Y L+ GL VGE
Sbjct: 146 ILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L + +++ +N+++++MCK ++EA + EM S G PD +YS
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSA 265
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + + M N+ P+V+T+N ++ CK+ K++E + D M+++G
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C EVN A + M + V PD +Y++++ ++ +FD A
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+++ M ++ P V TYS ++ GL K G++ A + + M D G+PP Y+S ++
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGL-SKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Query: 296 L 296
L
Sbjct: 445 L 445
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 150/281 (53%), Gaps = 2/281 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P++ + ++ ++CK K V A F +P V TYS L+ G +G+L +A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF++M+ D+ N L+ A CK G + E + M G +P+ +Y+ + +
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C +++ + ++M + + P++ +Y+ +I CK +K +EA L EM + PD
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y++++ ++ AL+L+ +M V P+ TYN +L L + + D+A +
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK 460
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ +GF P +STYS+++ GLC + GKLE+A K FE ++ +G
Sbjct: 461 FKDKGFQPDISTYSILIKGLC-QSGKLEDARKVFEDLLVKG 500
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 146/294 (49%), Gaps = 6/294 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGELSEAR 64
P ++ +++L +L K KH + + K EF P + +IL+ +G + A
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTV--LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAF 140
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F ++L+ D + +L + +C G I +A ++ ++G D SY IH
Sbjct: 141 SVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGL 200
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + +L + + PNV YN II +CK + V EA+ L EM+ +G +PD
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDV 260
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A+++ C ++ A+ L +M EN+ PD +T+N+++ + G+ V++
Sbjct: 261 VTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDM 320
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M K+G P+ TY+ ++ G C K ++ +A F M G+ P + ++ N
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVK-EVNKAKSIFNTMAQGGVNPDIQSYSIMIN 373
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 131/250 (52%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GIKP+ + L+ C K V A F+ A+ P +++YSI++ G + +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LF EM + D++ ++SL++ + K+G I A ++ +M G P+ +Y+
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNS 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L K P++ TY+ +I+ LC++ K+E+A ++ ++++ +G
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D ++Y ++ C N AL L+++M +PD TY +++ L + D A
Sbjct: 501 YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560
Query: 240 EVWESMEKRG 249
++ M RG
Sbjct: 561 KLLREMIARG 570
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ IKP +Y + L++A CK +K FD K P TY+ L+ G V E
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A+ +F+ M + DI +++ ++ CK DEA + +EM PD +YS
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I ++ I +++D M + PN+ TYN I+ LCK +V++A LL + ++G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C ++ A ++ + + D + Y ++++ G F+ A
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ ME G P TY +++ L KK + A K M+ G+P
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDEN-DMAEKLLREMIARGLP 572
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 7/276 (2%)
Query: 29 AHQFFDNAKHEFTP------TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH 82
+ QF N F P +YS ++ +A LF+ +L R
Sbjct: 29 SFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEF 88
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N +L ++ K+ + + ++M G +P+ + +I I+ FC+ I F V + +
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
VP+ T+ + + LC ++++A+ D+++ G + D+ SY ++ C E
Sbjct: 149 MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL L+ R+ V P+ YN ++ + +V + A +++ M +G P V TYS ++
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALIS 268
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G C GKL++A F M+ E I P T +L N
Sbjct: 269 GFC-ILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P + LL LCK K+ KVA + F+ K+++ P K YSIL+ G V A+K
Sbjct: 185 EPDAAEFATLLDTLCKYKYPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNRSDMAKKF 244
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDAFS 116
+ML +I+ +N LL +C+ + + A +L+EMR G EPD S
Sbjct: 245 LKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTS 304
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YSI +H + A+ + SMK + P V TY +I+ L ++E+ LLDEM+
Sbjct: 305 YSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMV 364
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM--PDRHTYNMVLKLLVRVGR 234
G P +YN L + R +V AL L +M + PD HTYN++L + ++ R
Sbjct: 365 AEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNR 424
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
++W M + P + +Y++++H C + K EAC++F M+++G P T E
Sbjct: 425 HGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQ-KWREACQFFMEMIEKGFLPQKITFE 483
Query: 295 MLRNRLV 301
L L+
Sbjct: 484 TLYRGLI 490
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE------------FTPTVKTYS 48
M+ GI+P+I + LL+ +C+ + ++F D H P V +YS
Sbjct: 248 MLVHGIEPNIVTYNILLNGICRHASLHPDYRF-DRTVHAAEDLLKEMRGRGIEPDVTSYS 306
Query: 49 ILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
I++ + +F M ER CP + + S+++ + G +++ +L EM +
Sbjct: 307 IILHVYSRAHKPELCLCMFRSMKERGICPT-VATYTSVIKCLSSCGRLEDGEILLDEMVA 365
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN--LVPNVFTYNCIIRKLCKNEKV 165
G P +Y+ F+ + D+ + + + MK P++ TYN ++ K +
Sbjct: 366 EGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRH 425
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ +M E PD SY ++ CD + A + M ++ +P + T+ +
Sbjct: 426 GTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETL 485
Query: 226 LKLLVRVGRFDRATEVWESMEKR 248
+ L++ W +++R
Sbjct: 486 YRGLIQADML----RTWRRLKRR 504
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 14/278 (5%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
A++++++A+ +A D A ++ + + GA ++++ + A R D M
Sbjct: 120 AYDAVVDALGRARQFDAAWRVVVDASADGAA-SPRTFAVLARRYVAAGMTRQAIRAFDDM 178
Query: 141 KRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
+ + + P+ + ++ LCK + + A ++ ++ + P+E Y+ ++ C
Sbjct: 179 EAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKR-KYKYGPNEKMYSILIYGWCKVNR 237
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG------RFDR----ATEVWESMEKRG 249
+MA + + M + P+ TYN++L + R RFDR A ++ + M RG
Sbjct: 238 SDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRG 297
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P V++YS+++H + + K E F M + GI P +T + L G L+
Sbjct: 298 IEPDVTSYSIILH-VYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDG 356
Query: 310 EILADKMERSTSCTIQELANAMRGKTGFRKSRSEETEL 347
EIL D+M C N + RK + EL
Sbjct: 357 EILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALEL 394
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 79/215 (36%), Gaps = 38/215 (17%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
GI+P + +LH + ++ F + K PTV TY+ +++ L G L +
Sbjct: 297 GIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDG 356
Query: 64 RKLFDEML-ERKCPV---------------DILAHNSLLEAMCKAGNIDEA--------- 98
L DEM+ E CP D+ A L M G++
Sbjct: 357 EILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILL 416
Query: 99 --------HGMLREMRSIGAE----PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
HG + ++ S E PD SY++ IH FC++ + M +
Sbjct: 417 GMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFL 476
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
P T+ + R L + + + +L + E A
Sbjct: 477 PQKITFETLYRGLIQADMLRTWRRLKRRVDEEAAK 511
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 169/360 (46%), Gaps = 38/360 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILV------- 51
M G P++ + ++ LCK A Q FD+ KH P TY L+
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515
Query: 52 ------------------------RGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
GL +G++S A ++++ MLE + D + N L+
Sbjct: 516 RAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIA 575
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
CKAGN ++A + EM + +PD ++ I C+A + + +LD M + P
Sbjct: 576 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 635
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
NV TYN ++ LCK+ ++EEA Q L+EM+ G PD +Y +++ C + + AL+L+
Sbjct: 636 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 695
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ + PD TYN+++ L + G+ ++A V E M +G +P V TY+ ++ LC K
Sbjct: 696 SELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLC-K 754
Query: 268 KGKLEEACKYFEMM---VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
G LEEA + M V P T +L N L +G +D L +M R SC +
Sbjct: 755 AGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK-SCDV 813
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 167/334 (50%), Gaps = 36/334 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ P+I + L LCK+ A + + +P T+S L+ GL G++ E
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +FD+M+ +++ +N+L+ +CKA ++ AH M+ M G PD +YS+ +
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM-IERGAN 181
AFC+A+ + +L M PNV T+N II LCK+++ EA+Q+ D+M ++ G
Sbjct: 439 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLV 498
Query: 182 PDEWSYNAIL-------------------------AYHC------DRAEVNMALRLITRM 210
PD+ +Y ++ A++C +V+ AL++ RM
Sbjct: 499 PDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRM 558
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ ++PD+ T+N+++ + G F++A+ ++E M + P V T+ ++ GLC K G+
Sbjct: 559 LELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC-KAGQ 617
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+E A ++M + G+PP T L + L G
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 161/321 (50%), Gaps = 5/321 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G+ P+I + +++ LCK + + F+ + P V TY+ L+ L G+
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSY 117
L EAR+L +M R C +++ ++ L+ +CK G IDEA +++EM +S P+ +Y
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNL--VPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+ F+ C+ + ++ S++ +L P+ T++ +I LCK +++EA + D+M
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 386
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
I G P+ +YNA++ C ++ A +I M + V PD TY++++ + R
Sbjct: 387 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A E+ M RG P+V T++ ++ GLCK E + +M + G+ P T
Sbjct: 447 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCT 506
Query: 296 LRNRLVGLGFLDIIEILADKM 316
L + L G E L D M
Sbjct: 507 LIDGLFRTGRAGQAEALLDAM 527
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 143/294 (48%), Gaps = 7/294 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ + L++ LCK ++ AH ++ TP V TYS+LV
Sbjct: 386 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYS 118
+ EA +L M R C +++ NS+++ +CK+ EA M +M G PD +Y
Sbjct: 446 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYC 505
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I +LD+M P+ + +NC I L K V A Q+ + M+E
Sbjct: 506 TLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLEL 561
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD+ ++N ++A C A L M +N+ PD T+ ++ L + G+ + A
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++ + M G P+V TY+ +VHGLC K G++EEAC++ E MV G P S T
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLC-KSGRIEEACQFLEEMVSSGCVPDSIT 674
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 33/299 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ P+I + L LCK+ + A + + +P T+S L+ GL G+ E
Sbjct: 813 VLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 872
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +FD+M+ +++ +N L+ +CK ++ AH M+ M G PD +YS+ +
Sbjct: 873 ACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVD 932
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM-IERGAN 181
AFC+A+ + +L M PNV T+N II LCK+++ EA+Q+ D+M ++ G
Sbjct: 933 AFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLA 992
Query: 182 PDEWSYNAIL-------------------------AYHC---DRAEVNMALRLITRMTKE 213
PD+ +Y ++ A++C +++ R + RM +
Sbjct: 993 PDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLEL 1052
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++PD+ T+N+++ + G F++A+ ++E M + P V T+ ++ GLC K G++E
Sbjct: 1053 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC-KAGQVE 1110
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 43/359 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV G P L++ALC+ A Q K + P TY+ILV GL G+
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA---HGMLREMRSIGAEPDAFS 116
+A + +EM+ + D++ +N+L++++CKAG+++EA HG + S P+ +
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782
Query: 117 YSIFIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYN--------------------- 153
YS+ I+ C+ I ++ M K +++PN+ TYN
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842
Query: 154 ----------------CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+I LCK + +EA + D+MI G P+ +YN ++ C
Sbjct: 843 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
++ A +I M + V PD TY++++ + D A E+ M RG P+V T+
Sbjct: 903 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ ++ GLCK E + +M + G+ P T L + L G+ E+L D M
Sbjct: 963 NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 54/337 (16%)
Query: 25 HVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH 82
+ ++ QF+D A F T+ +++ + L G ++A LF L +C + +
Sbjct: 90 NAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTY 149
Query: 83 NSLLEAMCKAG-NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL-DSM 140
++LL A KAG +++ G R +RS Y+I + + C A + + M
Sbjct: 150 STLLRATYKAGGDVERTLGFFRRIRSSSRS--VADYNIVLQSLCRAGETARALEIFRGEM 207
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
R + P + TYN II LCK+ ++ +L +E++ERG +PD +YN ++ C ++
Sbjct: 208 ARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDL 267
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG--FYPSVSTYS 258
A RL M+ + +P+ TY++++ L +VGR D A E+ + M ++ P++ TY+
Sbjct: 268 EEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYN 327
Query: 259 VMVHGLCK------------------------------------KKGKLEEACKYFEMMV 282
+ GLCK K G+++EAC F+ M+
Sbjct: 328 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 387
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
G P T L N L ADKMER+
Sbjct: 388 AGGYVPNVITYNALVNGLCK----------ADKMERA 414
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P L+ LCK A FD+ + P V TY++L+ GL ++ A
Sbjct: 850 VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAH 909
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ + M+++ D++ ++ L++A CKA ++DEA +L M S G P+ +++ I
Sbjct: 910 AMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGL 969
Query: 125 CEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD---------- 173
C+++ F++ D M ++ L P+ TY +I L + +A LLD
Sbjct: 970 CKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAF 1029
Query: 174 ------------------EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
M+E PD+ ++N ++A C A L M +N+
Sbjct: 1030 NCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 1089
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
PD T+ ++ L + G+ + W+ M
Sbjct: 1090 QPDVMTFGALIDGLCKAGQVE---ATWDIM 1116
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + L+ A CK HV A + A TP V T++ ++ GL +
Sbjct: 915 MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
EA ++FD+M L+ D + + +L++ + + G +A +L M +PD ++++
Sbjct: 975 SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM----PDPDTYAFN 1030
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ + D+ R L M LVP+ T+N +I CK E+A L +EM+ +
Sbjct: 1031 CCINGLSKLGDVS---RALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 1087
Query: 179 GANPDEWSYNAILAYHCDRAEV 200
PD ++ A++ C +V
Sbjct: 1088 NLQPDVMTFGALIDGLCKAGQV 1109
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
M G P++ + ++ LCK A Q FD+ KH P TY L+ GL G
Sbjct: 950 MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A L D M + D A N + + K G++ A L M + PD +++
Sbjct: 1010 WAGQAEVLLDAMPDP----DTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFN 1062
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
I I C+A + + + M NL P+V T+ +I LCK +VE + ++
Sbjct: 1063 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P + L+ C + A F+ E P V T+SILV G G
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ + M+++ D++ + SL++ C +++A + M G + SY+I
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + + M N++P+V TYN +I LCK+ K+ A +L+DEM +RG
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN+IL C +V+ A+ L+T+M E + PD +TY +++ L + GR A
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E + +G+ +V TY+VM+ G C ++A M D G P + T E++
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGFCDND-LFDKALALLSKMEDNGCIPNAKTYEII 517
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ L L+ LC + + A F D F Y L+ GL VG+ S A
Sbjct: 121 GYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + + +++ +N+++++MCK ++EA + EM S G PD +YS I
Sbjct: 181 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISG 240
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC ++ + + M + P+V+T++ ++ CK +V+EA +L M+++G PD
Sbjct: 241 FCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD 300
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +++ +C +VN A + M + V + +YN+++ ++ + D A +++
Sbjct: 301 VVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFK 360
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP----PYSSTVEML 296
M + P V TY+ ++ GLC K GK+ A K + M D G+P Y+S ++ L
Sbjct: 361 EMHCKNIIPDVVTYNSLIDGLC-KSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 3/320 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LCK A Q + P V Y+ ++ + V ++EA L+ EM+ +
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++ +++L+ C G +++A G+ +M S PD +++SI + FC+ +
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL M + + P+V TY ++ C ++V +A + + M + G + SYN ++
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +V+ A+ L M +N++PD TYN ++ L + G+ A ++ + M RG
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILA 313
TY+ ++ LCK ++++A M DEGI P T +L + L G L D I
Sbjct: 407 ITYNSILDALCKNH-QVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFE 465
Query: 314 DKMERSTSCTIQELANAMRG 333
D + + + T+ ++G
Sbjct: 466 DLLVKGYNITVYTYTVMIQG 485
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GIKP + L+ C K V A F+ A+ T V++Y+I++ G + +
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF EM + D++ +NSL++ +CK+G I A ++ EM G D +Y+
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L MK + P+++TY +I LCK ++++A + ++++ +G
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N ++Y ++ CD + AL L+++M +P+ TY +++ L D A
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAE 531
Query: 240 EVWESMEKRGF 250
++ M RG
Sbjct: 532 KLLREMIARGL 542
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 149/314 (47%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI + + L++ + H + F N K + P T + L++GL G++ +A
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ ++ + + +L+ +CK G A +LR + +P+ Y+ I +
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ F + M + P+V TY+ +I C K+ +A L ++MI NPD
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++++ ++ C V A ++ M K+ + PD TY ++ V + ++A ++
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFN 325
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M + G +V +Y++M++G CK K K++EA F+ M + I P T L + L
Sbjct: 326 TMAQGGVTANVQSYNIMINGFCKIK-KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384
Query: 304 GFLDIIEILADKME 317
G + L D+M
Sbjct: 385 GKISYALKLVDEMH 398
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ I P +Y L+ CK VK A K P V TY L+ G V +
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A+ +F+ M + ++ ++N ++ CK +DEA + +EM PD +Y+
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ I +++D M + + TYN I+ LCKN +V++A LL +M + G
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y ++ C + A + + + +TY ++++ FD+A
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKAL 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ ME G P+ TY +++ L +K
Sbjct: 497 ALLSKMEDNGCIPNAKTYEIIILSLFEK 524
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---TYSILVRGLGDVGELSEAR 64
P I++ ++L +L K + A + + EF T++IL+ +G +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISL--HREMEFNGIASDLVTFNILINCFSQLGHTHFSF 111
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F +L++ + + +L++ +C G I +A ++ ++G + Y I+
Sbjct: 112 SVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGL 171
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + ++L + + PNV YN II +CK + V EA+ L EM+ +G +PD
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 231
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A+++ C ++N A+ L +M E + PD +T+++++ + GR A V
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M K+G P V TY ++ G C K ++ +A F M G+ + ++ N
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVK-QVNKAKSIFNTMAQGGVTANVQSYNIMIN 344
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 132/258 (51%), Gaps = 12/258 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G+ ++ + +++ CK K V A F P V TY+ L+ GL G+
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A KL DEM +R P D + +NS+L+A+CK +D+A +L +M+ G +PD ++Y+I
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I C+ D ++F L +K YN+ V+TY +I+ C N+ ++A LL +M
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDL-LVKGYNIT--VYTYTVMIQGFCDNDLFDKALALLSKME 503
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+ G P+ +Y I+ ++ E +MA +L+ M ++ + L R F
Sbjct: 504 DNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL---FGWKKAYCLFTRF--FQ 558
Query: 237 RATEVWESMEKRGFYPSV 254
R + ++ +E R + S+
Sbjct: 559 RRSNLYPPLEVRSGHGSI 576
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + ++ L + A L EM D++ N L+ + G+ +
Sbjct: 53 TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ + G EP+A + + I C IH D + N Y +I LC
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + A QLL + + P+ YN I+ C VN A L + M + + PD
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY+ ++ +G+ + A ++ M P V T+S++V G C K+G+++EA M
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC-KEGRVKEAKNVLAM 291
Query: 281 MVDEGIPP 288
M+ +GI P
Sbjct: 292 MMKQGIKP 299
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ +L I +L ++ K A + REM G D +++I I+ F +
Sbjct: 44 FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
H F V ++ + PN T +I+ LC ++ +A D+++ G + ++
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C + + AL+L+ R+ + V P+ YN ++ + +V + A +++ M
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+G P V TYS ++ G C GKL +A F M+ E I P T +L
Sbjct: 224 SKGISPDVVTYSALISGFC-ILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%)
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+D HS+ + + N P +F + I+ L K + A L EM G D ++
Sbjct: 35 DDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTF 94
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++ + + + + K+ P+ T ++K L G+ +A + +
Sbjct: 95 NILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA 154
Query: 248 RGFYPSVSTYSVMVHGLCK 266
GF+ + Y +++GLCK
Sbjct: 155 LGFHLNKVCYGTLINGLCK 173
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 148/287 (51%), Gaps = 4/287 (1%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQ--FFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
G P + + +L A+ + R VK++ + + + + +P V TY+IL+RG VGEL
Sbjct: 172 GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ 231
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ F EM C +++ +N+L++A CK G IDEA G+L+ M S G +P+ SY++ I
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C + + +L+ M P+ TYN ++ CK +A + EM+ G +
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y A++ C +N A+ +M + P+ TY ++ R G + A +
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + GF PSV TY+ +HG C + ++EEA + MV++G+ P
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLE-RMEEALGVVQEMVEKGLAP 457
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L+ A CK + A + + P + +Y++++ GL G + EA
Sbjct: 244 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 303
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM + D + +N+LL CK GN +A + EM G P +Y+ I++
Sbjct: 304 WEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 363
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ D M+ L PN TY +I + + EAY++L+EM E G +P
Sbjct: 364 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 423
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA + HC + AL ++ M ++ + PD +Y+ ++ R G DRA ++ +
Sbjct: 424 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++G P TYS ++ GLC+ + +L EAC + M+D G+PP T L N
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMR-RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 542
Query: 304 GFLDIIEILADKM 316
G L+ L D+M
Sbjct: 543 GDLNKALHLHDEM 555
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 56/378 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G+ PS+ L++++CK +++ A +FFD + P +TY+ L+ G G
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 404
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA ++ +EM E ++ +N+ + C ++EA G+++EM G PD SYS
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ F++ M + P+ TY+ +I+ LC+ ++ EA L EM++ G
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y ++ +C ++N AL L M + +PD TY++++
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL ++ G A V+ESM +R
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DI 308
P + Y+V++HG C + G L +A ++ M+ G P++ TV L L G ++
Sbjct: 645 HKPGEAVYNVIIHGHC-RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 703
Query: 309 IEILADKMERSTSCTIQE 326
E++ D + SC + E
Sbjct: 704 SEVIGDTLR---SCRLNE 718
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 10/301 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P + LL+ CK + HQ + ++ +P+V TY+ L+ + L
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNF---HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A + FD+M R + + +L++ + G ++EA+ +L EM G P +Y+ F
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH C + V+ M L P+V +Y+ II C+ +++ A+Q+ EM+E+G
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD +Y++++ C+ + A L M + PD TY ++ G ++A
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP---YSSTVEMLR 297
+ + M +GF P TYSV+++GL K+ E F+++ +E +P Y + +E
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610
Query: 298 N 298
N
Sbjct: 611 N 611
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 133/341 (39%), Gaps = 52/341 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G PS+ + +H C + ++ A + P V +YS ++ G GE
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ EM+E+ D + ++SL++ +C+ + EA + +EM +G PD F+Y+
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL------- 172
I+A+C D++ + D M +P+ TY+ +I L K + EA +LL
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594
Query: 173 -------------------------------------------DEMIERGANPDEWSYNA 189
+ M+ER P E YN
Sbjct: 595 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 654
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
I+ HC + A L M +P T ++K L + G + +EV +
Sbjct: 655 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSC 714
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
V+V + K+G +E M +G+ P S
Sbjct: 715 RLNEAELAKVLVE-INHKEGNMEAVLNVLTDMAKDGLLPNS 754
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE-----KVEEAYQL 171
+ + + ++ N I ++ K +P V +YN ++ + ++ EE Y+
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR- 203
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
EMI +P+ ++YN ++ C E+ L M + +P+ TYN ++ +
Sbjct: 204 --EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
+GR D A + +SM +G P++ +Y+V+++GLC ++G ++EA + E M +G P
Sbjct: 262 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLC-REGSMKEAWEILEEMGYKGFTPDEV 320
Query: 292 TVEMLRN 298
T L N
Sbjct: 321 TYNTLLN 327
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 154/293 (52%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ FG +P I+ + L+H LCK + A + ++ P V TY+ILV GL G
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + EM R ++ + +N L+ A+C+ + A +L EM + G +PD F+Y+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + I FR+ +M V N TYN +I L + ++A L+++M+ RG
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN ++ C + L L +M + + D + N+++ L +VG+ D A
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
E RGF P + TY+ +++GLC K G+++EA F+ + EG+ P + T
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLC-KVGRIKEALNLFDRLQVEGVRPDAFT 672
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARK 65
P+ L+ L++ +K A F + F P + TY+IL+ GL G LS AR
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +EM R C +++ + L+ +CKAG ++EA +L EM + G ++ Y+ I A C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+H +L M P++FTYN +I LCK ++++EA++L M+ GA +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ R AL L+ M D+ TYN ++K +VG ++ E++E M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G + ++M++GLC K GK++ A ++ ++ G P T + N L +G
Sbjct: 592 IMDGLGADTISCNIMINGLC-KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G P + + ++H LCK + A + D F P TY L+ GL +G+
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338
Query: 60 LSEARKLFDEMLERKCP-----------------------------------VDILAHNS 84
L+EARK+ +++ CP DI +N
Sbjct: 339 LNEARKI---LIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ +CK G++ A ++ EM G EP+ +Y+I ++ C+A + VL M
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L N YNC+I LC+ EKV A LL EM +G PD ++YN+++ C ++ A
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL M + + + TYN ++ L+R G F +A + M RG TY+ ++
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
C K G +E+ + +E M+ +G+ + + ++ N L +G +D E L D + R
Sbjct: 576 C-KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 37/362 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+++ ++ ALC V A D KH P Y L+ L +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA KL +EM C D+ N ++ +CK I +A ++ M G PD +Y
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328
Query: 120 FIHAFCEANDIHSVFRVL--------------------------------DSMKRYNLVP 147
+H C ++ ++L ++M + P
Sbjct: 329 LLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQP 388
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
++FTYN ++ LCK + A L++EM RG P+ +Y ++ C + A ++
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M+ + + YN ++ L R + A + M +G P + TY+ +++GLCK
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTIQE 326
+++EA + F M+ +G + T L + L+ G F + ++ D + R CT+ +
Sbjct: 509 D-RIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR--GCTLDK 565
Query: 327 LA 328
+
Sbjct: 566 IT 567
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P+ D +L L +VA + F+D +PTV T+ I+++ L E+ A
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +M + C + + + +L+ A+ + + EA +L EM +G PD +++ IH C
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ N IH +++D M P+ TY ++ LC+ K+ EA ++L ++ P+
Sbjct: 300 KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNA 355
Query: 186 SYNAILAYHCDRAEVNMALRLITR-MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N ++ + ++ A + M PD TYN+++ L + G A ++
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
M +RG P+V TY+++V+GLC K G LEEA
Sbjct: 416 MSRRGCEPNVITYAILVNGLC-KAGLLEEA 444
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 34/294 (11%)
Query: 47 YSILVRGLGDVGELSEA-RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ I+++ G G+ +A R L D C +++ +LE + A + +M
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P F++ I + A C N++ S +L M ++ VPN Y +I L + +V
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA +LL+EM G PD ++N ++ C +++ A +L+ RM PD TY +
Sbjct: 270 SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFL 329
Query: 226 LKLLVRVGRFDRATEVW--------------------------------ESMEKRGFYPS 253
L L R+G+ + A ++ E+M GF P
Sbjct: 330 LHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPD 389
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ TY++++HGLC K+G L A M G P T +L N L G L+
Sbjct: 390 IFTYNILMHGLC-KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ A CK +++ + ++ + + +I++ GL VG++ A + + +
Sbjct: 569 NGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN 628
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE---AND 129
R DI+ +NS+L +CK G I EA + ++ G PDAF+Y+ FI C+ ND
Sbjct: 629 RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Query: 130 IHSVF-RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
S F R +++ VP+ T+N ++ L K E + +LDE+
Sbjct: 689 ACSFFYRGIEN----GFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ + +++ LCK V A +F +A + F P + TY+ ++ GL VG
Sbjct: 591 MIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGR 650
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD + D +N+ + CK G +++A G P ++++
Sbjct: 651 IKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNV 710
Query: 120 FIHAFCEANDIHSVFRVLDSM 140
++ + ++ + F VLD +
Sbjct: 711 LVYTLLKQSNQENNFFVLDEL 731
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 154/293 (52%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ FG +P I+ + L+H LCK + A + ++ P V TY+ILV GL G
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + EM R ++ + +N L+ A+C+ + A +L EM + G +PD F+Y+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + I FR+ +M V N TYN +I L + ++A L+++M+ RG
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN ++ C + L L +M + + D + N+++ L +VG+ D A
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
E RGF P + TY+ +++GLC K G+++EA F+ + EG+ P + T
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLC-KVGRIKEALNLFDRLQVEGVRPDAFT 672
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARK 65
P+ L+ L++ +K A F + F P + TY+IL+ GL G LS AR
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +EM R C +++ + L+ +CKAG ++EA +L EM + G ++ Y+ I A C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+H +L M P++FTYN +I LCK ++++EA++L M+ GA +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ R AL L+ M D+ TYN ++K +VG ++ E++E M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G + ++M++GLC K GK++ A ++ ++ G P T + N L +G
Sbjct: 592 IMDGLGADTISCNIMINGLC-KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G P + + ++H LCK + A + D F P TY L+ GL +G+
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338
Query: 60 LSEARKLFDEMLERKCP-----------------------------------VDILAHNS 84
L+EARK+ +++ CP DI +N
Sbjct: 339 LNEARKI---LIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ +CK G++ A ++ EM G EP+ +Y+I ++ C+A + VL M
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L N YNC+I LC+ EKV A LL EM +G PD ++YN+++ C ++ A
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL M + + + TYN ++ L+R G F +A + M RG TY+ ++
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
C K G +E+ + +E M+ +G+ + + ++ N L +G +D E L D + R
Sbjct: 576 C-KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 37/362 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+++ ++ ALC V A D KH P Y L+ L +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA KL +EM C D+ N ++ +CK I +A ++ M G PD +Y
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328
Query: 120 FIHAFCEANDIHSVFRVL--------------------------------DSMKRYNLVP 147
+H C ++ ++L ++M + P
Sbjct: 329 LLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQP 388
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
++FTYN ++ LCK + A L++EM RG P+ +Y ++ C + A ++
Sbjct: 389 DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVL 448
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M+ + + YN ++ L R + A + M +G P + TY+ +++GLCK
Sbjct: 449 HEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKV 508
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTIQE 326
+++EA + F M+ +G + T L + L+ G F + ++ D + R CT+ +
Sbjct: 509 D-RIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR--GCTLDK 565
Query: 327 LA 328
+
Sbjct: 566 IT 567
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P+ D +L L +VA + F+D +PTV T+ I+++ L E+ A
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +M + C + + + +L+ A+ + + EA +L EM +G PD +++ IH C
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ N IH +++D M P+ TY ++ LC+ K+ EA ++L ++ P+
Sbjct: 300 KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNA 355
Query: 186 SYNAILAYHCDRAEVNMALRLITR-MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N ++ + ++ A + M PD TYN+++ L + G A ++
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
M +RG P+V TY+++V+GLC K G LEEA
Sbjct: 416 MSRRGCEPNVITYAILVNGLC-KAGLLEEA 444
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 34/294 (11%)
Query: 47 YSILVRGLGDVGELSEA-RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ I+++ G G+ +A R L D C +++ +LE + A + +M
Sbjct: 150 FMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDM 209
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P F++ I + A C N++ S +L M ++ VPN Y +I L + +V
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA +LL+EM G PD ++N ++ C +++ A +L+ RM PD TY +
Sbjct: 270 SEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFL 329
Query: 226 LKLLVRVGRFDRATEVW--------------------------------ESMEKRGFYPS 253
L L R+G+ + A ++ E+M GF P
Sbjct: 330 LHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPD 389
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ TY++++HGLC K+G L A M G P T +L N L G L+
Sbjct: 390 IFTYNILMHGLC-KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ A CK +++ + ++ + + +I++ GL VG++ A + + +
Sbjct: 569 NGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN 628
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
R DI+ +NS+L +CK G I EA + ++ G PDAF+Y+ FI C+ ++
Sbjct: 629 RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVND 688
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
VP+ T+N ++ L K E + +LDE+
Sbjct: 689 ACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G ++Y+ + LL C+ A F K P +Y+ ++ GL L EA
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++LF EM +C + + ++L++ CK G+++E G+L EM +G E D F YS I
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC DI + + M R N+ PNV TY+C++ LCK +K +EA Q+LD M PD
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y + + A++++ M K P+ TYN ++ L + GR D A + E
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILE 363
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+M K+G P V TYS +V GLC GK++EA +++ +
Sbjct: 364 TMAKKGKKPDVVTYSTLVKGLC-GVGKIDEAVDLLNLLMSK 403
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 145/272 (53%), Gaps = 3/272 (1%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNI 95
K F V +++L++G G+ +A LF M++R C + D +++N+++ +CK +
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLF-CMMKRNCLIPDCVSYNTVINGLCKGKRL 180
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
EA + +EM+ +P++ ++S I FC+ D+ F +L+ M++ L +VF Y+ +
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I C +E +L +EM+ + P+ +Y+ ++ C + + A +++ MT V
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD Y ++ L + GR A +V + M KRG P+ TY+ +++GLC K+G++++A
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC-KEGRVDDAL 359
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
E M +G P T L L G+G +D
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKID 391
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ + P++ L++ALCK++ K A Q D + P V Y++L GL G
Sbjct: 260 MLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGR 319
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A K+ D M++R + + +N+++ +CK G +D+A G+L M G +PD +YS
Sbjct: 320 ASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYST 379
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ C I +L+ + K +++ P+VF +N +I++LCK ++ A ++ M+E
Sbjct: 380 LVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVE 439
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG + +YN ++ + ++ AL L + P+ TY +++ L ++
Sbjct: 440 RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSI 499
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A ++ G P+VS Y+ ++ LC ++ +E+A F+ M + P
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLC-RESSVEQARNLFQEMRNANHDP 549
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 151/331 (45%), Gaps = 6/331 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS + L+ L K KH V A P + S L+ + + S A +
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+++R +++ N LL+ C++G+ +A + M+ PD SY+ I+ C+
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK PN T++ +I CKN VEE + LL+EM + G D +
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+A+++ C + ++ L M ++NV P+ TY+ ++ L + ++ A ++ ++M
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
P V Y+V+ GL K G+ +A K ++MV G P + T + N L G +
Sbjct: 297 GCKVRPDVVAYTVLADGL-SKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355
Query: 307 D----IIEILADKMERSTSCTIQELANAMRG 333
D I+E +A K ++ T L + G
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCG 386
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 39/324 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G +P+ + +++ LCK V A + AK P V TYS LV+GL VG+
Sbjct: 330 MVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGK 389
Query: 60 LSEA-------------------------------------RKLFDEMLERKCPVDILAH 82
+ EA ++++ M+ER P +I+ +
Sbjct: 390 IDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTY 449
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N L++ AG + +A + ++ G P+A +Y++ I+ C+ + + + +
Sbjct: 450 NILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRA 509
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
P V YN ++ LC+ VE+A L EM +PD S+N I+ +V
Sbjct: 510 SGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVES 569
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L+ M N++PD T+++++ +++G+ D A ++E M G P + ++
Sbjct: 570 AKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLK 629
Query: 263 GLCKKKGKLEEACKYFEMMVDEGI 286
G KGK E+ + M D+ +
Sbjct: 630 GY-SLKGKTEKVVSMLQQMADKDV 652
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
N +P+ + N +I L K + + + +M P S +A++ + + + A
Sbjct: 54 NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++ + K + + +N++LK + G +A +++ M++ P +Y+ +++G
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
LCK K +L EA + F+ M P S T L
Sbjct: 174 LCKGK-RLVEAKELFKEMKGGECKPNSVTFSAL 205
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 40/195 (20%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGL---GDV- 57
G +P++ + + L+ +LC+ V+ A F NA H+ P V +++I++ G GDV
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD--PDVVSFNIIIDGTLKAGDVE 568
Query: 58 -------------------------------GELSEARKLFDEMLERKCPVDILAHNSLL 86
G+L EA L++ M+ D + +SLL
Sbjct: 569 SAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLL 628
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
+ G ++ ML++M D+ S + C + + ++L ++ V
Sbjct: 629 KGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSV 688
Query: 147 PNVFTYNCIIRKLCK 161
N ++ KL K
Sbjct: 689 GASIKCNELLMKLNK 703
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 6/290 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
+ G P ++ LL LC K V + H ++ H P V +Y+ ++ G
Sbjct: 77 KLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDH-CPPNVVSYTTVIHGFFKED 135
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
E+ +A LF EML+R P D++ NS+++ +CK +D+A +LR+M PD +Y+
Sbjct: 136 EVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYN 195
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+H + + + R+L M R+ PN TY+ +I LCK EA ++L+ MI+
Sbjct: 196 SLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQS 255
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
NP+ +Y +L + + ++ LI M + V PD H +N+ + V+ GR D A
Sbjct: 256 RGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEA 315
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M ++G P + +Y M+ GLC K G+L+ A F M+D+G+ P
Sbjct: 316 MLTFNKMRQQGLMPDIISYGTMIDGLC-KIGRLDAAMSQFCQMIDDGLSP 364
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 3/240 (1%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
+ PT TY+IL+ VG L+ A ++++ + ++ +L +C
Sbjct: 5 GSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRT 64
Query: 96 DEAHGM-LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR--YNLVPNVFTY 152
+A + +R +G PD FSY++ + C+ ++ M + PNV +Y
Sbjct: 65 SDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSY 124
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
+I K ++V +AY L EM++RG PD + N+I+ C ++ A ++ +M
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFD 184
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+++MPD TYN ++ + G+ A + + M + G P+ TYS+++ LCK G E
Sbjct: 185 KHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTE 244
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G P+ L+ LCK A + ++ + P V TY L+ G G+
Sbjct: 217 MSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGD 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E L D M++ D N + A K G +DEA +MR G PD SY
Sbjct: 277 LVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGT 336
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M L P++ + +I K E+A +L EM++RG
Sbjct: 337 MIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRG 396
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + ++ +V A L M +V P+ +YN ++ G+ D
Sbjct: 397 IRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVL 456
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++ + M G P+ T++ ++
Sbjct: 457 KLLDDMLSVGLKPNAVTFNTLL 478
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 17/226 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P I ++ LCK + A QF +P + ++ L+ G G+
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF EM++R ++ ++++ + K G + EA + M +P+ SY+
Sbjct: 382 WEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNA 441
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + A + V ++LD M L PN T+N LLD+M+ G
Sbjct: 442 IIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFN----------------TLLDDMLSMG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
PD + N ++ C+ + L L M + D T N++
Sbjct: 486 LKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 39/231 (16%)
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P +Y+I I C ++ F L + + L N ++ I+R LC ++ +A +
Sbjct: 11 PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70
Query: 172 LDEMIER-GANPDEWSYNAILAYHCDRA-------------------------------- 198
+ + G PD +SY +L CD
Sbjct: 71 VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130
Query: 199 -----EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
EV A L M + PD T N ++ L +V D+A EV M + P
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+TY+ +VHG G+L+EA + + M G PP T ML + L G
Sbjct: 191 CTTYNSLVHGYL-SSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFG 240
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P ++ + L+H LCK+ + A D + + TP + TY+ L+ G +
Sbjct: 371 MIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + +EM + ++I+ +N LL A+CK G + +A ML EM G +PD F+++
Sbjct: 431 LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNT 490
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M ++ N TYN +I + ++EA +L+++M+ RG
Sbjct: 491 LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE +YN ++ C AL L M +++++P + N+++ L RVG+ A
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ M RG P V TY+ +++GLC K G + EA F + EGI P + T L
Sbjct: 611 ELLRDMIHRGLAPDVVTYNSLINGLC-KMGNIREAFNLFNKLQAEGIQPDAITYNTL 666
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P+ L++ LC+ V A + TP ++IL+ G G L EA
Sbjct: 308 GFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP---TPNDVHFTILINGYVKSGRLDEAN 364
Query: 65 K-LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+D+M++ C D+ N+L+ +CK G + A M+ +M + G P+ +Y+ +
Sbjct: 365 AFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDG 424
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ N + VL+ M N+ YN ++R LCKN KV +A +L EM ++G PD
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPD 484
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N ++ C AL L M + V+ + TYN ++ +R G A ++
Sbjct: 485 IFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVN 544
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG TY+ ++ C K G E+A F+ MV + + P + + +L N L +
Sbjct: 545 DMLFRGCPLDEITYNGLIKAFC-KLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRV 603
Query: 304 G-FLDIIEILADKMERSTS---CTIQELANAMRGKTGFRKSRSEETELESD 350
G + +E+L D + R + T L N + R++ + +L+++
Sbjct: 604 GKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAE 654
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 1/267 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + +I + LL ALCK V K + + P + T++ L+ GL V +A
Sbjct: 445 GFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+ +ML + + +N+L+ A + G I EA ++ +M G D +Y+ I A
Sbjct: 505 LALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKA 564
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + D M R +LVP+ + N +I LC+ KV A +LL +MI RG PD
Sbjct: 565 FCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPD 624
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C + A L ++ E + PD TYN ++ R G FD A +
Sbjct: 625 VVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLL 684
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ F P+ T+ ++V K+ GK
Sbjct: 685 RGVENAFIPNDVTWYILVSNFIKEIGK 711
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 39/363 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++Y ++ ALC V A D KH P Y L+ L
Sbjct: 199 MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDR 258
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA KL +EM C D+ N ++ +C+ I E ++ M G P+ +Y +
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318
Query: 120 FIHAFCEA----------------NDIHSVFRVL------------------DSMKRYNL 145
++ C ND+H F +L D M +
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVPTPNDVH--FTILINGYVKSGRLDEANAFLYDKMIKNGC 376
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+VFT+N +I LCK + A ++++M G P+ +Y +L C + ++ A
Sbjct: 377 RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGY 436
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M+ + + YN++L+ L + G+ +A ++ M +G P + T++ ++ GLC
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC 496
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
K K + Y +M++D I + ++ L G + ++++ D + R C +
Sbjct: 497 KVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFR--GCPLD 554
Query: 326 ELA 328
E+
Sbjct: 555 EIT 557
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 36/308 (11%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
LD L+ A C A+ F++ PTV T+ ++++ L V E+ A L +M +
Sbjct: 180 LDILVSANCPSV---AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTK 236
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
C + + + +L+ A+ K ++EA +L EM +G PD +++ I+ C N IH
Sbjct: 237 HGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHE 296
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-------------------- 172
+++D M PN TY ++ LC+ KV+EA LL
Sbjct: 297 GAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVK 356
Query: 173 ------------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
D+MI+ G PD +++N ++ C + + A+ ++ M+ P+
Sbjct: 357 SGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLI 416
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY +L + + + A V M +GF ++ Y+V++ LC K GK+ +A
Sbjct: 417 TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALC-KNGKVPKALDMLGE 475
Query: 281 MVDEGIPP 288
M D+G P
Sbjct: 476 MSDKGCKP 483
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 127/248 (51%), Gaps = 6/248 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT K+Y++++ L S A +F EML + + +++A+C +D A +
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR+M G P++ Y IHA + + ++ ++L+ M +P+V T+N +I LC+
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ E +L+D M+ RG P++ +Y ++ C +V+ A L+ ++ N D H
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN---DVH- 346
Query: 222 YNMVLKLLVRVGRFDRATE-VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ +++ V+ GR D A +++ M K G P V T++ ++HGLC KKG + A
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC-KKGLMGSAVDMVND 405
Query: 281 MVDEGIPP 288
M G P
Sbjct: 406 MSANGCTP 413
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 5/244 (2%)
Query: 91 KAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---HAFCEANDIHSVFRVLDSMKR-YNLV 146
K G E + + + I E AF S+FI + AN R+L MK Y
Sbjct: 111 KLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCE 170
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P +YN ++ L A + EM+ +G P +++ ++ C EV+ A L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ MTK +P+ Y ++ L + R + A ++ E M G P V T++ +++GLC+
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQE 326
++ E K + M+ G P T +L N L +G +D ++L +K+
Sbjct: 291 LN-RIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTI 349
Query: 327 LANA 330
L N
Sbjct: 350 LING 353
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 163/320 (50%), Gaps = 3/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 130 ILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 189
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M + C D++ + S+++++CK + EA + +M G PD F+Y+
Sbjct: 190 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 249
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+ C + V +L+ M ++P+V ++ ++ LCK K+ EA+ ++D MI RG
Sbjct: 250 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 309
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ HC ++E++ A+++ M P+ +YN ++ ++ R D+AT
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 369
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TY+ ++H G+L++A F MV G P +T +L +
Sbjct: 370 YLFEEMCQKELIPNTVTYNTLMHXC--HVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 427
Query: 300 LVGLGFLDIIEILADKMERS 319
L LD L +E S
Sbjct: 428 LCKKSHLDEAMALLKTIEGS 447
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 146/300 (48%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M+ PS D ++LL ++ K K N F P V T +IL+ +
Sbjct: 60 MLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL-SNQMDSFGIPPDVYTLNILINSFCHLN 118
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A + ++L+ D +L+ +C G I +A + +M G +P+ +Y
Sbjct: 119 RLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYG 178
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + ++ R+L SM++ N P+V Y II LCK+ +V EA+ L +M+ +
Sbjct: 179 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 238
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD ++Y +++ C+ E L+ +M +MPD ++ V+ L + G+ A
Sbjct: 239 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 298
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V + M RG P+V TY+ ++ G C + +++EA K F+ MV G P + L N
Sbjct: 299 HDVVDMMIIRGVEPNVVTYNALMDGHCLQS-EMDEAVKVFDTMVHNGYAPNVISYNTLIN 357
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 139/277 (50%), Gaps = 4/277 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + L+ C + + A + FD H + P V +Y+ L+ G +
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 364
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM +++ + + +N+L+ C G + +A + EM + G PD +Y I
Sbjct: 365 MDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRI 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +L +++ N+ P++ Y +I +C+ ++E A + + +G
Sbjct: 424 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C R ++ A +L M PD TYN + + L++ RA
Sbjct: 484 LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAI 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
++ + M RGF VST +++V LC KL+++ K
Sbjct: 544 QLLQEMLARGFSADVSTTTLLVEMLCDD--KLDQSVK 578
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 3/297 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P + ++ ALCK + AH D P V TY+ L+ G E
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 329
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+FD M+ +++++N+L+ CK +D+A + EM P+ +Y+
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 389
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C + + M + +P++ TY ++ LCK ++EA LL +
Sbjct: 390 LMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 448
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD Y ++ C E+ A + + ++ + + P+ TY +++ L R G D A
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 508
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M+ G P TY+ + GL + K L A + + M+ G ST +L
Sbjct: 509 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL-RAIQLLQEMLARGFSADVSTTTLL 564
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P + N LL ++ K + +M S G PD ++ +I
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N + F VL + + P+ T+ +IR LC K+ +A L D+MI G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C N A+RL+ M + N PD Y ++ L + + A
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G P + TY+ ++H LC
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K+GK+ EA +MM+ G+ P T L
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 320
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+HN +D+A M + P ++ + + + +VF + +
Sbjct: 35 LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + + P+V+T N +I C ++ A+ +L ++++ G PD ++ ++ C +
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ AL L +M E P+ TY ++ L +VG + A + SME+ P V Y+
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
++ LCK + ++ EA F MV +GI P Y+S + L N
Sbjct: 215 IIDSLCKDR-QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 256
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + LL LCK+ H+ A + P ++ Y+I++ G+ GE
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR +F + + ++ + ++ +C+ G +DEA+ + EM G PD +Y+
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + ++L M +V T ++ LC ++ + Q+L E ++
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ +N ++ + K ++ + L ++M G PD ++ N ++ C + A +
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ ++ K PD T+ +++ L G+ A +++ M GF P+V TY +++GLC
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC- 185
Query: 267 KKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLVGLGF 305
K G A + M P Y+S ++ L ++R V F
Sbjct: 186 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 152/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP Y + ++ LCK V A Q K P Y+ ++ G +G +S A
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEM +K DI+ + S++ +CK+G + EA M EM G EPD +Y+ I
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A ++ F V + M + L PNV TY + LCKN +++ A +LL EM +G P+
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN I+ C + ++L+ M PD TY ++ ++G +A E+
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M + P++ T++V+++G C G LE+ + E M+++GI P ++T L
Sbjct: 547 IMLNKRLQPTLVTFNVLMNGFC-MSGMLEDGERLIEWMLEKGIMPNATTFNSL 598
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 171/334 (51%), Gaps = 6/334 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELS 61
E G+ + + +LH LC+ V+ AH P V +Y ++V G +GEL
Sbjct: 235 ELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELD 294
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ KL DE+ + D +N+++ +CK G + EA +LR MR G PD Y+ I
Sbjct: 295 KVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVI 354
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ ++ + ++ D M+R +VP++ TY +I +CK+ K+ EA ++ +EM+ +G
Sbjct: 355 SGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE 414
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PDE +Y A++ +C E+ A + +M ++ + P+ TY + L + G D A E+
Sbjct: 415 PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANEL 474
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M ++G P+V TY+ +V+GLC K G +E+ K E M G P + T L +
Sbjct: 475 LHEMSRKGLQPNVYTYNTIVNGLC-KIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533
Query: 302 GLGFL----DIIEILADKMERSTSCTIQELANAM 331
+G + +++ I+ +K + T T L N
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M ++G+ P ++ CK +V A + FD + + P + TY+ ++ G+ G+
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR++F+EML + D + + +L++ CKAG + EA + +M G P+ +Y+
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ +I +L M R L PNV+TYN I+ LCK +E+ +L++EM G
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ +C E+ A L+ M + + P T+N+++ G +
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ E M ++G P+ +T++ ++ C K + + ++ M D G+ P S+T +L
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYC-IKNNMRATTEIYKAMHDRGVMPDSNTYNIL 633
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 142/283 (50%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P L+ CK +K A + + TP V TY+ L GL GE+ A
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + ++ +N+++ +CK GNI++ ++ EM G PD +Y+ + A
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ +L M L P + T+N ++ C + +E+ +L++ M+E+G P+
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ +C + + + M VMPD +TYN+++K + A + +
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M ++G+ + +TY ++ G K+K K EA K FE M G+
Sbjct: 652 EMVEKGYSVTAATYDALIRGFYKRK-KFVEARKLFEEMRKHGL 693
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 157/318 (49%), Gaps = 5/318 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLG-DVGEL 60
++G P ++DL L + V A + F ++ +V + ++ + L + +
Sbjct: 166 DWGSHPLVFDL--YFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGI 223
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+F+E E + ++ N +L +C+ G + EAH +L +M G PD SY +
Sbjct: 224 KIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVV 283
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +C ++ V +++D +K L P+ + YN II LCKN +V EA QLL M + G
Sbjct: 284 VSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD Y +++ C V+ A +L M ++ ++PD TY V+ + + G+ A E
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M +G P TY+ ++ G C K G+++EA MV +G+ P T L + L
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYC-KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462
Query: 301 VGLGFLDIIEILADKMER 318
G +D+ L +M R
Sbjct: 463 CKNGEIDVANELLHEMSR 480
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ L LCK + VA++ + ++ P V TY+ +V GL +G
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + KL +EM D + + +L++A CK G + +AH +LR M + +P ++++
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + R+++ M ++PN T+N ++++ C + ++ M +RG
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC + A L M ++ TY+ +++ + +F A
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+++E M K G Y + V
Sbjct: 683 KLFEEMRKHGLVAEKDIYDIFV 704
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G++P++Y + +++ LCK +++ + + F P TY+ L+ +GE+++A
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ML ++ ++ N L+ C +G +++ ++ M G P+A +++ +
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQ 601
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C N++ + + +M ++P+ TYN +I+ CK ++EA+ L EM+E+G +
Sbjct: 602 YCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVT 661
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+Y+A++ R + A +L M K ++ ++ Y++ + + G ++ E+
Sbjct: 662 AATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 164/318 (51%), Gaps = 10/318 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P I + LL ALCK V+ A + + P +TY+I V G V + KL
Sbjct: 129 QPEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKL 188
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHA 123
+EM+E D A+N+ ++ CKAG + EA + MR+ G+ P A +Y+I I A
Sbjct: 189 LEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVA 248
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + F+++ M +P+V TY II +C K++EAY+ L+EM + PD
Sbjct: 249 LAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPD 308
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L CD + AL+L RM + N +P TYNM++ + + D A E W+
Sbjct: 309 IVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQ 368
Query: 244 SMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIP-PYSSTVEMLRNRL 300
M+ RG P + TYSVM+ GL C K+E+AC E ++++GI PY L +L
Sbjct: 369 EMDNRGCRPDIDTYSVMIDGLFNC---NKVEDACFLLEEVINKGIKLPYKKFDSFLM-QL 424
Query: 301 VGLGFLDIIEILADKMER 318
+G L I +++ M +
Sbjct: 425 SVIGDLQAIHRVSEHMRK 442
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 10/257 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE----FTPTVKTYSILVRGLGD 56
MVE G +P + + + CK V A F+ + + +PT KTY+I++ L
Sbjct: 192 MVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQ 251
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ E KL M+ C D+ + ++E MC G IDEA+ L EM + PD +
Sbjct: 252 HDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVT 311
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ F+ C+ ++ M N +P+V TYN +I + + + A++ EM
Sbjct: 312 YNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMD 371
Query: 177 ERGANPDEWSYNAIL--AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
RG PD +Y+ ++ ++C++ E A L+ + + + ++ L L +G
Sbjct: 372 NRGCRPDIDTYSVMIDGLFNCNKVED--ACFLLEEVINKGIKLPYKKFDSFLMQLSVIGD 429
Query: 235 FDRATEVWESMEKRGFY 251
V E M R FY
Sbjct: 430 LQAIHRVSEHM--RKFY 444
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 38/184 (20%)
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEA--------------------------------- 168
R P + +N ++ LCK VE+A
Sbjct: 125 RVKTQPEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTR 184
Query: 169 -YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVM--PDRHTYNM 224
+LL+EM+E G PD ++YN + +C V A+ L M TK + + P TY +
Sbjct: 185 GMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAI 244
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ L + R + ++ M G P V+TY ++ G+C GK++EA K+ E M ++
Sbjct: 245 IIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMC-VCGKIDEAYKFLEEMGNK 303
Query: 285 GIPP 288
P
Sbjct: 304 SYRP 307
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 162/304 (53%), Gaps = 9/304 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+Y+ +HALCK V A + N K P V T++ L+ GL G L EA+++
Sbjct: 54 PSMYNF--FVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEM +++ +N+L+ + AG EA + M+ + PD +Y+ IH FC+
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCK 168
Query: 127 ANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDE 184
+ +I + L+ MK R P+ FTY+ +I LCK+ + +A +LL EMI R
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ +C +++ A L++ M + PD TY+ ++ L R G D+ + E
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG P V TY+V+V GLC K GK+ EAC+ + M+++G P + T ++ + L +
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLC-KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKID 347
Query: 305 FLDI 308
LD+
Sbjct: 348 KLDM 351
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + KP + + L+ LCK + A Q D + F + TY+ L+ GL G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYS 118
EA + M D +N+++ CK+G ID A+G L EM+ G PD F+YS
Sbjct: 140 SGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 119 IFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I I+ C+++++ +L M R + +V +N ++ CK + ++ A +LL M+E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y+ I+ C +V+ L+ +M PD TY +++ L + G+
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A + + M + G P+ TYS++ GLCK KL+ A + D+G
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKID-KLDMANDLLTSIRDKG 363
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 5/240 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARK 65
P + ++H CK + A+ F + K +P TYSIL+ GL L +A +
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213
Query: 66 LFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L EM+ RK C ++A N+L++ CKA ++D A +L M G PD +YS I
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C D+ F +L+ M P+V TY ++ LCK K+ EA +L+ M+E G P+
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT-EVWE 243
+Y+ + C +++MA L+T + + + D + +L L V+ DRA + W+
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL-LSVKKRLLDRAAFQKWK 392
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 85 LLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
L+ A C AG + A +LREM + G P Y+ F+HA C++ + V+ +MK
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
P+V T+N +I LCK +++EA Q+LDEM G + +YN ++ A
Sbjct: 84 ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR-GFYPSVSTYSVMVH 262
+ ++ MT PD TYN ++ + G DRA E M++R G P TYS++++
Sbjct: 144 VLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200
Query: 263 GLCK 266
GLCK
Sbjct: 201 GLCK 204
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
G P + L++ LCK +++ A + + + +V ++ LV G +L
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR 246
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR+L MLE C D++ ++++++ +C+ G++D+ +L +M S G +PD +Y++ +
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+A + R++ M PN TY+ + LCK +K++ A LL + ++G
Sbjct: 307 GLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRIT 366
Query: 183 DEWSYNAIL 191
D ++ A+L
Sbjct: 367 DVVAFEALL 375
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
D ++Y + + A C A ++ + +L M++ + P YN + LCK+ KV EA ++
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
+ M + PD ++N ++A C ++ A +++ M + + TYN ++ L
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-GIPPYS 290
GR A V + M P TY+ ++HG C K G+++ A + E M G P +
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFC-KSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 291 STVEMLRNRL 300
T +L N L
Sbjct: 193 FTYSILINGL 202
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACK 276
D +TY ++++ G A ++ ME++ G P+ S Y+ VH LCK GK+ EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKS-GKVPEAME 75
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ M D P T L L G LD + + D+MERS
Sbjct: 76 VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERS 118
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 162/304 (53%), Gaps = 9/304 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+Y+ +HALCK V A + N K P V T++ L+ GL G L EA+++
Sbjct: 54 PSMYNF--FVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEM +++ +N+L+ + AG EA + M+ + PD +Y+ IH FC+
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCK 168
Query: 127 ANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDE 184
+ +I + L+ MK R P+ FTY+ +I LCK+ + +A +LL EMI R
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ +C +++ A L++ M + PD TY+ ++ L R G D+ + E
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG P V TY+V+V GLC K GK+ EAC+ + M+++G P + T ++ + L +
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLC-KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKID 347
Query: 305 FLDI 308
LD+
Sbjct: 348 KLDM 351
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + KP + + L+ LCK + A Q D + F + TY+ L+ GL G
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYS 118
EA + M D +N+++ CK+G ID A+G L EM+ G PD F+YS
Sbjct: 140 SGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196
Query: 119 IFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I I+ C+++++ +L M R + +V +N ++ CK + ++ A +LL M+E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y+ I+ C +V+ L+ +M PD TY +++ L + G+
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A + + M + G P+ TYS++ GLCK KL+ A + D+G
Sbjct: 317 ACRLVKRMLEDGCTPNAVTYSLVFDGLCKID-KLDMANDLLTSIRDKG 363
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 5/240 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARK 65
P + ++H CK + A+ F + K +P TYSIL+ GL L +A +
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213
Query: 66 LFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L EM+ RK C ++A N+L++ CKA ++D A +L M G PD +YS I
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C D+ F +L+ M P+V TY ++ LCK K+ EA +L+ M+E G P+
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT-EVWE 243
+Y+ + C +++MA L+T + + + D + +L L V+ DRA + W+
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL-LSVKKRLLDRAAFQKWK 392
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 85 LLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
L+ A C AG + A +LREM + G P Y+ F+HA C++ + V+ +MK
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
P+V T+N +I LCK +++EA Q+LDEM G + +YN ++ A
Sbjct: 84 ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR-GFYPSVSTYSVMVH 262
+ ++ MT PD TYN ++ + G DRA E M++R G P TYS++++
Sbjct: 144 VLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200
Query: 263 GLCK 266
GLCK
Sbjct: 201 GLCK 204
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
G P + L++ LCK +++ A + + + +V ++ LV G +L
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR 246
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR+L MLE C D++ ++++++ +C+ G++D+ +L +M S G +PD +Y++ +
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+A + R++ M PN TY+ + LCK +K++ A LL + ++G
Sbjct: 307 GLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVT 366
Query: 183 DEWSYNAIL 191
D ++ +L
Sbjct: 367 DVVAFETLL 375
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
D ++Y + + A C A ++ + +L M++ + P YN + LCK+ KV EA ++
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
+ M + PD ++N ++A C ++ A +++ M + + TYN ++ L
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-GIPPYS 290
GR A V + M P TY+ ++HG C K G+++ A + E M G P +
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFC-KSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 291 STVEMLRNRL 300
T +L N L
Sbjct: 193 FTYSILINGL 202
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACK 276
D +TY ++++ G A ++ ME++ G P+ S Y+ VH LCK GK+ EA +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKS-GKVPEAME 75
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ M D P T L L G LD + + D+MERS
Sbjct: 76 VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERS 118
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + + L+ ALC+ V+ A + + P T++ L++G + G + A
Sbjct: 84 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 143
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ MLE C + N L+ CK G +++A G +++ + G EPD +Y+ F++
Sbjct: 144 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 203
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + +V+D M + P+VFTYN ++ LCKN ++EEA +L++M++RG PD
Sbjct: 204 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 263
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++A C + AL L ++T + V PD +T+N+++ L +VG A ++E
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 323
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M+ G P TY+ ++ LC GKL +A + M G P + T
Sbjct: 324 EMKNSGCTPDEVTYNTLIDNLC-SLGKLGKALDLLKDMESTGCPRSTIT 371
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 51/382 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGD 56
MV+ G P I + L+ ALC ++ A D A+ +P V T++IL+ L
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEA---LDLARQVTVKGVSPDVYTFNILINALCK 311
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG+ A +LF+EM C D + +N+L++ +C G + +A +L++M S G +
Sbjct: 312 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 371
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+ I V D M + N T+N +I LCK++K+++A++L+++MI
Sbjct: 372 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 431
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +YN+IL ++C + ++ A ++ MT D TY ++ L + GR
Sbjct: 432 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 491
Query: 237 RATEVWESMEKRGFYPS-----------------------------------VSTYSVMV 261
A +V M +G P+ TY ++
Sbjct: 492 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 551
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIEILADKME 317
GLC+ G ++EA + MVD+G P S+ ML L+ LG F+ IEI+ +K++
Sbjct: 552 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 611
Query: 318 RSTSCTIQELANAMRGKTGFRK 339
S +A+RG RK
Sbjct: 612 LRESD-----VSAIRGYLKIRK 628
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + ++ LC+ HV A + D E P V TY+I+V L G+L EA
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++R C DI N+L+ A+C ++EA + R++ G PD ++++I I+A
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK------------------------- 158
C+ D H R+ + MK P+ TYN +I
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Query: 159 ----------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M +G + + ++N ++ C +++ A LI
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + P+ TYN +L + G +A ++ E+M GF V TY +++GLC K
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC-KA 487
Query: 269 GKLEEACKYFEMMVDEGIPP 288
G+ + A K M +G+ P
Sbjct: 488 GRTQVALKVLRGMRIKGMRP 507
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 29 AHQFFDNAK----HEFTPTVK------TYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
Q FD+A ++ P Y+ L+ L + ++ ++ EM R D
Sbjct: 29 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 88
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++ N+L++A+C+A + A ML EM S G PD +++ + F E I + RV
Sbjct: 89 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 148
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M T N +I CK +VE+A + + I G PD+ +YN + C
Sbjct: 149 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 208
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V AL+++ M +E PD TYN+V+ L + G+ + A + M RG P ++T++
Sbjct: 209 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 268
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ LC +LEEA + +G+ P T +L N L +G + L ++M+
Sbjct: 269 TLIAALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327
Query: 319 STSCTIQELA 328
S CT E+
Sbjct: 328 S-GCTPDEVT 336
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 10/244 (4%)
Query: 62 EARKLFDE----MLERKCPV-----DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
E ++LFD+ +L + P+ D + +N LL + + + + EM + G +P
Sbjct: 28 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 87
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +++ + A C A+ + + +L+ M + P+ T+ +++ + +E A ++
Sbjct: 88 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 147
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
M+E G + + + N ++ +C V AL I + + PD+ TYN + L +
Sbjct: 148 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 207
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
A +V + M + G P V TY+++V+ LC K G+LEEA MVD G P +T
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC-KNGQLEEAKGILNQMVDRGCLPDITT 266
Query: 293 VEML 296
L
Sbjct: 267 FNTL 270
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 145/284 (51%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P Y + L+ LC R A D+ + P V TY+IL+ +A
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
KL DEM ++ C DI+ +N ++ +C+ G +D+A L+ + S G EP+ SY+I +
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A +++ M R PNV T+N +I LC+ VE A ++LD++ + G P+
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN IL C + +++ A+ + M PD +YN +L L R G D A E+
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ +G P + +Y+ ++ GL K GK EEA + MV +G+ P
Sbjct: 388 LKDKGCTPVLISYNTVIDGL-TKAGKTEEALELLNEMVTKGLQP 430
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 145/317 (45%), Gaps = 38/317 (11%)
Query: 5 GIKPSIYD-LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++PS L+ LC A + + + P V +Y+ +V G G+L A
Sbjct: 84 GLEPSAAGPCAALIKKLCASGRTAEARRVLASCE----PDVMSYNAMVAGYCVTGQLDNA 139
Query: 64 RKL--------------------------------FDEMLERKCPVDILAHNSLLEAMCK 91
R+L D+ML R C D++ + LLEA CK
Sbjct: 140 RRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCK 199
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+A +L EMR G PD +Y++ ++ C+ + L S+ Y PN +
Sbjct: 200 RSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVS 259
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +++ LC E+ E+A +L+ EM +G P+ ++N ++++ C R V A+ ++ ++
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP 319
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K P+ +YN +L + + DRA E M G YP + +Y+ ++ LC + G++
Sbjct: 320 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALC-RGGEV 378
Query: 272 EEACKYFEMMVDEGIPP 288
+ A + + D+G P
Sbjct: 379 DAAVELLHQLKDKGCTP 395
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +++ +C+ V A +F + + P +Y+I+++GL
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER 272
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL EM + P +++ N L+ +C+ G ++ A +L ++ G P++ SY+
Sbjct: 273 WEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNP 332
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ + ++ M P++ +YN ++ LC+ +V+ A +LL ++ ++G
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN ++ + AL L+ M + + PD TY+ + L R GR + A
Sbjct: 393 CTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAI 452
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + ++ G P+ Y+ ++ GLCK++ A F MV G P ST +L
Sbjct: 453 KAFCKVQDMGIRPNTVLYNAILLGLCKRRAT-HSAIDLFTYMVSNGCMPNESTYTIL 508
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 135/274 (49%), Gaps = 9/274 (3%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCP 76
L L +R ++ A + ++ + L++ L G +EAR++ C
Sbjct: 63 LRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVL-----ASCE 117
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
D++++N+++ C G +D A R + ++ EPD ++Y+ I C + V
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNAR---RLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
LD M R VP+V TY ++ CK ++A +LLDEM ++G PD +YN ++ C
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
V+ A+ + + P+ +YN+VLK L R++ A ++ M ++G P+V T
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+++++ LC ++G +E A + + + G P S
Sbjct: 295 FNMLISFLC-RRGLVEPAMEILDQIPKYGCTPNS 327
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G P++ + L+ LC+R V+ A + D K+ TP +Y+ ++ +
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + M+ C DI+++N+LL A+C+ G +D A +L +++ G P SY+
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M L P++ TY+ I LC+ ++EEA + ++ + G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YNAIL C R + A+ L T M MP+ TY ++++ L G A
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Query: 240 EVWESMEKRGF 250
E+ + RG
Sbjct: 523 EMMAELCSRGV 533
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 155/293 (52%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E GIKP + + L+ ALC+ V+ A + + P T++ L++G + G
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGS 235
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ MLE C + N L+ CK G +++A G +++ + G EPD +Y+
Sbjct: 236 IKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F++ C+ + +V+D M + P+VFTYN ++ LCKN ++EEA +L++M+ERG
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ C + AL L ++T + + PD +T+N+++ L +VG A
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++E M+ G P TY+ ++ LC GKL +A + M G P + T
Sbjct: 416 RLFEEMKSSGCTPDEVTYNTLIDNLC-SLGKLGKALDLLKEMESAGCPRSTVT 467
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 173/382 (45%), Gaps = 51/382 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGD 56
MVE G P I + L+ ALC ++ A D A+ +P V T++IL+ L
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEA---LDLARQVTLKGLSPDVYTFNILINALCK 407
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG+ A +LF+EM C D + +N+L++ +C G + +A +L+EM S G +
Sbjct: 408 VGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVT 467
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+ I V D M + N T+N +I LCK++++++A QL+ +MI
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +YN+IL ++C + ++ A ++ MT D TY ++ L + GR
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 237 RATEVWESMEKRGFY-----------------------------------PSVSTYSVMV 261
A ++ M +G P TY ++
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVF 647
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIEILADKME 317
GLC+ G + EA + MVD+G P S+ ML L+ LG F+ IEI+ +K +
Sbjct: 648 RGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKAD 707
Query: 318 RSTSCTIQELANAMRGKTGFRK 339
S +A+RG RK
Sbjct: 708 LGDSDV-----SAIRGYLKIRK 724
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P+ ++ L++ CK V+ A + + F P TY+ V GL G
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K+ D M++ D+ +N ++ +CK G ++EA G+L +M G PD +++
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNT 365
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C N + + + L P+V+T+N +I LCK + A +L +EM G
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +YN ++ C ++ AL L+ M TYN ++ L + R + A
Sbjct: 426 CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE 485
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
EV++ M+ +G + T++ ++ GLCK K ++++A + M+ EG+ P + T
Sbjct: 486 EVFDQMDLQGISRNAITFNTLIDGLCKDK-RIDDANQLISQMISEGLQPNNIT 537
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 37/318 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + ++ LC+ HV A + D E P V TY+I+V L G+L EA
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M+ER C DI N+L+ A+C ++EA + R++ G PD ++++I I+A
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK------------------------- 158
C+ D R+ + MK P+ TYN +I
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 159 ----------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M +G + + ++N ++ C ++ A +LI+
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLIS 524
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + P+ TYN +L + G +A ++ ++M GF V TY +++GLC K
Sbjct: 525 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLC-KA 583
Query: 269 GKLEEACKYFEMMVDEGI 286
G+ + A K M +G+
Sbjct: 584 GRTQVALKLLRGMRIKGM 601
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 131/263 (49%), Gaps = 2/263 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++ EM ER D++ N+L++A+C+A + A ML EM S G PD +++ + F
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFV 231
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
E I + RV M P T N +I CK +VE+A + + I G PD+
Sbjct: 232 EEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQI 291
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN + C V AL+++ M +E PD TYN+V+ L + G+ + A + M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+RG P ++T++ ++ LC +LEEA + +G+ P T +L N L +G
Sbjct: 352 VERGCLPDITTFNTLIVALCSGN-RLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 306 LDIIEILADKMERSTSCTIQELA 328
+ L ++M +S+ CT E+
Sbjct: 411 PQLALRLFEEM-KSSGCTPDEVT 432
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D + +N LL + + + + EM G +PD +++ + A C A+ + + +L
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ M + P+ T+ +++ + ++ A ++ M+E G +P + + N ++ +C
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
V AL I + PD+ TYN + L + G A +V + M + G P V TY
Sbjct: 269 GRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTY 328
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++V+ LC K G+LEEA MV+ G P +T L
Sbjct: 329 NIVVNCLC-KNGQLEEAKGILNQMVERGCLPDITTFNTL 366
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 6/308 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARK-LFDEM 70
++LL AL ++ A + + A + +F P + Y ++R LG ++ K L EM
Sbjct: 45 EELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEM 104
Query: 71 LERKCPVDILAHNSLLEAMCKAG-NIDEAHGMLREMRSI-GAEPDAFSYSIFIHAFCEAN 128
V + +S LE+ + +D +L ++ + G + D Y+ ++ E +
Sbjct: 105 RREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGS 164
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ + V M + P+V T+N +++ LC+ +V A +L+EM G PDE ++
Sbjct: 165 KMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFT 224
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ + + ALR+ RM + P + T N+++ ++GR + A +
Sbjct: 225 TLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIAN 284
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
GF P TY+ V+GLC + G + A K ++MV EG P T ++ N L G L+
Sbjct: 285 GFEPDQITYNTFVNGLC-QNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 343
Query: 309 IEILADKM 316
+ + ++M
Sbjct: 344 AKGILNQM 351
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 156/297 (52%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ GI P + L+ C + A F+ E P V T++ILV G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E + +FD M+++ + + +NSL++ C +++A + M G PD SYSI
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + M R N++P+V TY+ +I L K+ ++ A QL+D+M +RG
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN+IL C +V+ A+ L+T++ + + P+ +TY++++K L + G+ + A
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V+E + +G +V TY++M+ G C +G EA M D G P + T E++
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFC-VEGLFNEALALLSKMEDNGCIPDAKTYEII 546
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G P L+ LC + ++ A F D F +Y L+ GL VGE
Sbjct: 146 ILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L + +++ +N+++++MCK ++EA + EM S G PD +YS
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSA 265
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ + + M N+ P+V+T+N ++ CK+ K++E + D M+++G
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C EVN A + M + V PD +Y++++ ++ +FD A
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+++ M ++ P V TYS ++ GL K G++ A + + M D G+PP Y+S ++
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGL-SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Query: 296 L 296
L
Sbjct: 445 L 445
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 6/294 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGELSEAR 64
P ++ +++L +L K KH + + K EF P + +IL+ +G + A
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTV--LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAF 140
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F ++L+ D + +L++ +C G I +A ++ ++G D SY IH
Sbjct: 141 SVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGL 200
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + +L + + PNV YN II +CK + V EA+ L EMI +G +PD
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDV 260
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A+++ C ++N A+ L +M EN+ PD +T+N+++ + G+ V++
Sbjct: 261 VTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDM 320
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M K+G P+ TY+ ++ G C K ++ +A F M G+ P + ++ N
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVK-EVNKAKSIFNTMAQGGVNPDIQSYSIMIN 373
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 132/253 (52%), Gaps = 1/253 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GIKP+ + L+ C K V A F+ A+ P +++YSI++ G + +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LF EM + D++ ++SL++ + K+G I A ++ +M G P +Y+
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L +K + PN++TY+ +I+ LC++ K+E+A ++ + ++ +G
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N + +Y ++ C N AL L+++M +PD TY +++ L + D A
Sbjct: 501 HNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560
Query: 240 EVWESMEKRGFYP 252
++ M RG P
Sbjct: 561 KLLREMIARGVRP 573
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 139/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ IKP +Y + L++A CK +K FD K P TY+ L+ G V E
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A+ +F+ M + DI +++ ++ CK DEA + +EM PD +YS
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I ++ I +++D M + P + TYN I+ LCK +V++A LL ++ ++G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y+ ++ C ++ A ++ + + + TY ++++ G F+ A
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ ME G P TY +++ L KK + A K M+ G+ P
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDEN-DMAEKLLREMIARGVRP 573
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 7/276 (2%)
Query: 29 AHQFFDNAKHEFTP------TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH 82
+ QF N F P +YS ++ +A LF+ +L R
Sbjct: 29 SFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEF 88
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N +L ++ K+ + + ++M G +P+ + +I I+ FC+ I F V + +
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
VP+ T+ +I+ LC ++++A+ D+++ G + D+ SY ++ C E
Sbjct: 149 MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL L+ R+ V P+ YN ++ + +V + A +++ M +G P V TYS ++
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALIS 268
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G C GKL +A F M+ E I P T +L N
Sbjct: 269 GFC-ILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ I P+ + L+ CK ++V A F+ + + P + TY+ L+ GL + G+
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L+D+M+ +I+ N+L+ CK I EA + ++ P+A +++
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC+A + F + +SM + PNV TYNC+I LC+N+ V A +LL+EM
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C E + A +L+ M V P+ TYN ++ G A
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V MEK G +V TY+V++ G C K GKLE+A + M+++G+ P +T +++R
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFC-KTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLE 562
Query: 300 LVGLGFLDIIE 310
++ GF+ IE
Sbjct: 563 MLEKGFIPDIE 573
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 150/328 (45%), Gaps = 26/328 (7%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD----NAKHEFTPTVKTYSILVRG----- 53
EF I + ++LH L K F D N KH + +S+L+ G
Sbjct: 71 EFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVF--HSLLLGGDRPCA 128
Query: 54 ---------LGDVG--ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
L V E+ A ++F + + + + + N LL A+ K E +
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+EM +P+ +++IFI+ C+A ++ V++ +K + PN+ TYN +I CK
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248
Query: 163 EKVEEAYQ---LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+ Y+ +L EM+ P+E ++N ++ C V A M ++ + P+
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TYN ++ L G+ D A +W+ M G P++ T++ +++G CKKK ++EA K F+
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKK-MIKEARKLFD 367
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ ++ + P + T + + G ++
Sbjct: 368 DIAEQDLVPNAITFNTMIDAFCKAGMME 395
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+KP+ + L+ C ++K A + + E V TY++L++G G+
Sbjct: 474 MLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
L +A +L +EMLE+ + ++ + M + G I + G L + S+
Sbjct: 534 LEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNISSM 582
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + + L+ ALC+ V+ A + + P T++ L++G + G + A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ MLE C + N L+ CK G +++A G +++ + G EPD +Y+ F++
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + +V+D M + P+VFTYN ++ LCKN ++EEA +L++M++RG PD
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++A C + AL L ++T + V PD +T+N+++ L +VG A ++E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M+ G P TY+ ++ LC GKL +A + M G P + T
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLC-SLGKLGKALDLLKDMESTGCPRSTIT 463
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 177/382 (46%), Gaps = 51/382 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGD 56
MV+ G P I + L+ ALC ++ A D A+ +P V T++IL+ L
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEA---LDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG+ A +LF+EM C D + +N+L++ +C G + +A +L++M S G +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+ I V D M + N T+N +I LCK++K+++A+ L+++MI
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +YN+IL ++C + ++ A ++ MT D TY ++ L + GR
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 237 RATEVWESMEKRGFYPSVS-----------------------------------TYSVMV 261
A +V M +G P+ TY ++
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIEILADKME 317
GLC+ G ++EA + MVD+G P S+ ML L+ LG F+ IEI+ +K++
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703
Query: 318 RSTSCTIQELANAMRGKTGFRK 339
S +A+RG RK
Sbjct: 704 LRESDV-----SAIRGYLKIRK 720
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + ++ LC+ HV A + D E P V TY+I+V L G+L EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++R C DI N+L+ A+C ++EA + R++ G PD ++++I I+A
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK------------------------- 158
C+ D H R+ + MK P+ TYN +I
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 159 ----------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M +G + + ++N ++ C +++ A LI
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + P+ TYN +L + G +A ++ E+M GF V TY +++GLC K
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC-KA 579
Query: 269 GKLEEACKYFEMMVDEGIPP 288
G+ + A K M +G+ P
Sbjct: 580 GRTQVALKVLRGMRIKGMRP 599
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 29 AHQFFDNAK----HEFTPTVK------TYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
Q FD+A ++ P Y+ L+ L + ++ ++ EM R D
Sbjct: 121 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 180
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++ N+L++A+C+A + A ML EM S G PD +++ + F E I + RV
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M T N +I CK +VE+A + + I G PD+ +YN + C
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V AL+++ M +E PD TYN+V+ L + G+ + A + M RG P ++T++
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ LC +LEEA + +G+ P T +L N L +G + L ++M+
Sbjct: 361 TLIAALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 319 STSCTIQELA 328
S CT E+
Sbjct: 420 S-GCTPDEVT 428
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 40/322 (12%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELS---------- 61
+QLL AL ++ A + + A + +F P + Y ++R LG VG L
Sbjct: 42 EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101
Query: 62 ------------------EARKLFDE----MLERKCPV-----DILAHNSLLEAMCKAGN 94
E ++LFD+ +L + P+ D + +N LL + +
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ + EM + G +PD +++ + A C A+ + + +L+ M + P+ T+
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+++ + +E A ++ M+E G + + + N ++ +C V AL I + +
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD+ TYN + L + A +V + M + G P V TY+++V+ LC K G+LEEA
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC-KNGQLEEA 340
Query: 275 CKYFEMMVDEGIPPYSSTVEML 296
MVD G P +T L
Sbjct: 341 KGILNQMVDRGCLPDITTFNTL 362
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 166/316 (52%), Gaps = 21/316 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ +C + A FD E F P V TY L+ GL VG
Sbjct: 122 ILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGN 181
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M+++ C ++ A+N++++++CK + EA + EM + G PD F+Y+
Sbjct: 182 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNS 241
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C + V +L+ M ++P+V ++N ++ LCK KV EA+ ++D+MI+RG
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR-- 237
P+ +Y A++ HC +E++ A+++ M + MP+ +YN ++ ++ R D+
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361
Query: 238 -----------------ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
A +V+++M +G P+V +Y+ +++G CK + ++++A F
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ-RIDKAMYLFGE 420
Query: 281 MVDEGIPPYSSTVEML 296
M + + P + T L
Sbjct: 421 MCRQELIPDTVTYSTL 436
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 8/302 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+ PS D ++LL ++ K KH + ++HQ P + T IL+
Sbjct: 52 MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM---DSFGIPPNIYTLHILINSFCH 108
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + A + ++L+ D +L+ +C G I EA + +M G PD +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I+ C+ + + R+L SM + N PNVF YN II LCK+ +V EA+ L EM+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +PD ++YN+++ C+ E L+ M +MPD ++N V+ L + G+
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A +V + M +RG P+V TY+ ++ G C +++EA K F+ MV +G P + L
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS-EMDEAVKVFDTMVCKGCMPNVISYNTL 347
Query: 297 RN 298
N
Sbjct: 348 IN 349
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 21/305 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P + + ++ ALCK V AH D + P V TY+ L+ G + E
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG-------------------NIDEAHG 100
+ EA K+FD M+ + C +++++N+L+ CK N+DEA
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ M G P+ SY+ I+ +C+ I + M R L+P+ TY+ +I LC
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
E++++A L EM+ P+ +Y +L Y C + A+ L+ + N+ PD
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
N+ + + R G + A +++ ++ +G P V TYS+M++GLC ++G L+EA K F
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC-RRGLLDEASKLFRE 560
Query: 281 MVDEG 285
M + G
Sbjct: 561 MDENG 565
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 21/316 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVG- 58
M++ G++P++ L+ C + A + FD + P V +Y+ L+ G +
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356
Query: 59 ------------------ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+ EA K+FD M+ + C +++++N+L+ CK ID+A
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 416
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ EM PD +YS IH C + + M + +PN+ TY ++ LC
Sbjct: 417 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 476
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
KN + EA LL + +PD N + C E+ A L + ++ + + PD
Sbjct: 477 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 536
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY++++ L R G D A++++ M++ G + Y+ + G + + A + +
Sbjct: 537 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN-ETSRAIQLLQE 595
Query: 281 MVDEGIPPYSSTVEML 296
MV G +ST+ +
Sbjct: 596 MVARGFSADASTMTLF 611
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ ML + P + N LL ++ K + + +M S G P+ ++ I I++FC
Sbjct: 49 FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N + F VL + + P+ T+ +IR +C K+ EA L D+MI G PD +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C + A+RL+ M ++N P+ YN ++ L + + A ++ M
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+G P + TY+ ++H LC + + MVD I P
Sbjct: 229 TKGISPDIFTYNSLIHALC-NLCEWKHVATLLNEMVDSKIMP 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ + L++ CK + + K + F + + E P TYS L+ GL V
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF EM+ +++ + LL+ +CK + EA +L+ + +PD +I
Sbjct: 446 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 505
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A ++ + + ++ L P+V+TY+ +I LC+ ++EA +L EM E G
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ YN I E + A++L+ M D T + +K+L
Sbjct: 566 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 5/223 (2%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+HN ID A M + P ++ + + + ++ +
Sbjct: 27 LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + + PN++T + +I C +V A+ +L ++++ G PD ++ ++ C +
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ AL L +M E PD TY ++ L +VG A + SM ++ P+V Y+
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
++ LCK + ++ EA F MV +GI P Y+S + L N
Sbjct: 207 IIDSLCKDR-QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
N I + M R P+ +N ++ + K + L +M G P+ ++
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
+ ++ C V A ++ ++ K PD T+ +++ + G+ A +++ M
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIG 159
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLVG 302
GF P V TY +++GLC K G A + MV + P Y++ ++ L ++R V
Sbjct: 160 EGFRPDVVTYGTLINGLC-KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 303 LGF 305
F
Sbjct: 219 EAF 221
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + + L+ ALC+ V+ A + + P T++ L++G + G + A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ MLE C + N L+ CK G +++A G +++ + G EPD +Y+ F++
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + +V+D M + P+VFTYN ++ LCKN ++EEA +L++M++RG PD
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++A C + AL L ++T + V PD +T+N+++ L +VG A ++E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M+ G P TY+ ++ LC GKL +A + M G P + T
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLC-SLGKLGKALDLLKDMESTGCPRSTIT 463
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 51/382 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGD 56
MV+ G P I + L+ ALC ++ A D A+ +P V T++IL+ L
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEA---LDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG+ A +LF+EM C D + +N+L++ +C G + +A +L++M S G +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+ I V D M + N T+N +I LCK++K+++A++L+++MI
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +YN+IL ++C + ++ A ++ MT D TY ++ L + GR
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 237 RATEVWESMEKRGFYPSVS-----------------------------------TYSVMV 261
A +V M +G P+ TY ++
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIEILADKME 317
GLC+ G ++EA + MVD+G P S+ ML L+ LG F+ IEI+ +K++
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703
Query: 318 RSTSCTIQELANAMRGKTGFRK 339
S +A+RG RK
Sbjct: 704 LRESDV-----SAIRGYLKIRK 720
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + ++ LC+ HV A + D E P V TY+I+V L G+L EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++R C DI N+L+ A+C ++EA + R++ G PD ++++I I+A
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK------------------------- 158
C+ D H R+ + MK P+ TYN +I
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 159 ----------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M +G + + ++N ++ C +++ A LI
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + P+ TYN +L + G +A ++ E+M GF V TY +++GLC K
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC-KA 579
Query: 269 GKLEEACKYFEMMVDEGIPP 288
G+ + A K M +G+ P
Sbjct: 580 GRTQVALKVLRGMRIKGMRP 599
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 29 AHQFFDNAK----HEFTPTVK------TYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
Q FD+A ++ P Y+ L+ L + ++ ++ EM R D
Sbjct: 121 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 180
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++ N+L++A+C+A + A ML EM S G PD +++ + F E I + RV
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M T N +I CK +VE+A + + I G PD+ +YN + C
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V AL+++ M +E PD TYN+V+ L + G+ + A + M RG P ++T++
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ LC +LEEA + +G+ P T +L N L +G + L ++M+
Sbjct: 361 TLIAALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 319 STSCTIQELA 328
S CT E+
Sbjct: 420 S-GCTPDEVT 428
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 40/322 (12%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELS---------- 61
+QLL AL ++ A + + A + +F P + Y ++R LG VG L
Sbjct: 42 EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101
Query: 62 ------------------EARKLFDE----MLERKCPV-----DILAHNSLLEAMCKAGN 94
E ++LFD+ +L + P+ D + +N LL + +
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ + EM + G +PD +++ + A C A+ + + +L+ M + P+ T+
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+++ + +E A ++ M+E G + + + N ++ +C V AL I + +
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD+ TYN + L + A +V + M + G P V TY+++V+ LC K G+LEEA
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC-KNGQLEEA 340
Query: 275 CKYFEMMVDEGIPPYSSTVEML 296
MVD G P +T L
Sbjct: 341 KGILNQMVDRGCLPDITTFNTL 362
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 12/307 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-----------HEFTPTVKTYSI 49
+++ G KP+ L+ L+ LC + H K P V T++I
Sbjct: 123 ILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTI 182
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
LV G G + EA+ + M+ + ++ +NSL++ +++A + M +G
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD SYSI I+ FC+ + +L M ++PNV TY+ +I LCK+ K+ A
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L+DEM +RG P+ +Y++IL C +V+ A+ L+T+M + + P+ +TY +++K L
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ G+ + A +V+E + +G +V TY+VM+ G C KG +EA M D G P
Sbjct: 363 CQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC-DKGLFDEALTLLSKMEDNGCIPN 421
Query: 290 SSTVEML 296
+ T E++
Sbjct: 422 AKTYEII 428
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 148/279 (53%), Gaps = 13/279 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + + L+ K V A F+ A+ +P +++YSIL+ G + + EA
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM ++ +++ ++SL++ +CK+G I A ++ EM G P+ +YS + A
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + +L MK + PN++TY +I+ LC++ K+E+A ++ ++++ +G N +
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLN 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y ++ CD+ + AL L+++M +P+ TY +++ L + + A ++
Sbjct: 387 VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446
Query: 244 SMEKRGFYPSVS-----TYSVMVHG-------LCKKKGK 270
M + F V+ S+ V G LCKK+GK
Sbjct: 447 EMIETNFDGRVALTNDLIASIWVTGSSPGNSLLCKKQGK 485
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 15/228 (6%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS----VFRVLD 138
N L+ + C+ G+I A +L ++ +G +P+ + + I C IH V ++ D
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160
Query: 139 SMKRYN------LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
++ +N + P+V+T+ ++ CK +V+EA +L M+ +G P +YN+++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ +VN A + M + V PD +Y++++ ++ D A E+ + M + P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+V TYS ++ GLCK GK+ A K + M D G PP YSS ++ L
Sbjct: 281 NVVTYSSLIDGLCKS-GKISYALKLVDEMHDRGQPPNIVTYSSILDAL 327
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 15/298 (5%)
Query: 29 AHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEA 88
+ QF N F P T + ++ +A LF+ +L++ + N +L +
Sbjct: 16 SFQFLINTHFNFIPYFSTSTTFHNN----NDVDDAVSLFNRLLQQNPTPPNIEFNKILGS 71
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+ K+ + + ++M G +P+ + +I I++FC+ I S F VL + + PN
Sbjct: 72 LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPN 131
Query: 149 VFTYNCIIRKLCKNEKV----------EEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
T N +I+ LC N K+ ++A L ++MI NPD +++ ++ C
Sbjct: 132 TITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEG 191
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V A ++ M + + P TYN ++ V + ++A ++ +M + G P + +YS
Sbjct: 192 RVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYS 251
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++++G CK K ++EA + + M + I P T L + L G + L D+M
Sbjct: 252 ILINGFCKIK-MMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEM 308
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P + + L+ C +K A F+ E P V T++ILV G
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+ + M+++ D+ +NSL++ C +++A + + G P+ SYSI
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH FC+ + + M N++P+V TYN +I LCK K+ A +L+DEM +RG
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN+IL C +V+ A+ L+T+M E + PD TY ++ L + GR + A
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V+E + +G+ V+ Y+ M+ G C G +E+ M + G P + T E++
Sbjct: 478 IVFEDLLVKGYILDVNIYTAMIQGFC-SHGLFDESLDLLSKMEENGCIPNAVTYEII 533
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P++ L L+ LC + + A QF D F +Y L+ GL VG+
Sbjct: 133 ILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQ 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L + + +++ +N+++++MCK ++EA + EM S G PD +Y+
Sbjct: 193 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNA 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + + M N+ PNV+T+N ++ CK +++EA +L M+++G
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN+++ +C EVN A + +++ V P+ H+Y++++ ++ + D A
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAM 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP----PYSSTVEM 295
+++ M P V TY+ ++ GLCK GK+ A K + M D G+P Y+S ++
Sbjct: 373 NLFKEMHCNNIIPDVVTYNSLIDGLCKL-GKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Query: 296 L 296
L
Sbjct: 432 L 432
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 146/293 (49%), Gaps = 2/293 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LCK A Q + P V Y+ ++ + V ++EA L+ EM+ +
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++ +N+L+ C G + +A + +M P+ ++++I + FC+ +
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL M + + P+VFTYN ++ + C ++V +A + + + +RG NP+ SY+ ++
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +V+ A+ L M N++PD TYN ++ L ++G+ A ++ + M RG
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
TY+ ++ LCK ++++A M DEGI P T L + L G L+
Sbjct: 423 ITYNSILDALCKNH-QVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLE 474
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 162/348 (46%), Gaps = 41/348 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGELSEA 63
KPSI+ ++L +L K H + + EF T + SIL+ +G+ +
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSL--HRQMEFNGITSDLVILSILINCFSQLGQNPLS 126
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++L+ +++ +L++ +C G I +A ++ ++G + SY I+
Sbjct: 127 FSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING 186
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + ++L + + PNV YN II +CK + V EA+ L EM+ +G +PD
Sbjct: 187 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 246
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM----------------VLK 227
+YNA+++ C ++ A L +M EN+ P+ +T+N+ VL
Sbjct: 247 VVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLA 306
Query: 228 LLVRVG-------------------RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++++ G ++A ++ ++ +RG P++ +YS+M+HG CK K
Sbjct: 307 MMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIK 366
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K++EA F+ M I P T L + L LG + L D+M
Sbjct: 367 -KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 1/252 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GIKP ++ + L+ C K V A F+ ++ P + +YSI++ G + +
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF EM D++ +NSL++ +CK G I A ++ EM G D +Y+
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L MK + P++ TY ++ LCKN ++E+A + ++++ +G
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y A++ C + +L L+++M + +P+ TY +++ L D+A
Sbjct: 488 YILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAE 547
Query: 240 EVWESMEKRGFY 251
++ M RG +
Sbjct: 548 KLLREMITRGLF 559
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVG 58
M G +P ++ + L LC+ V A + D + T P V TY+ L
Sbjct: 300 MTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCR 359
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A +L +EM E+ ++ HN +++ +CK G ++ A G L +M G PD +Y+
Sbjct: 360 CSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYN 419
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IHA C+A +I + ++D M R L + FT N ++ LCK ++ EEA LL +R
Sbjct: 420 TLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQR 479
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE SY ++A + ALRL M ++ + P TYN ++K L R+GR A
Sbjct: 480 GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEA 539
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + ++G P +TY++++H C K+G LE A ++ MV+ P T L N
Sbjct: 540 IDKLNELMEKGLVPDDTTYNIIIHAYC-KEGDLENAFQFHNKMVENSFKPDVVTCNTLMN 598
Query: 299 RLVGLGFLD 307
L G LD
Sbjct: 599 GLCLNGKLD 607
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+K ++ + ++ LCK ++ A + A P V TY+ L+ G
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L DEM+ R +D N++L +CK +EA G+L+ G PD SY
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT 490
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + R+ D M L P++ TYN +I+ L + +++EA L+E++E+G
Sbjct: 491 VMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG 550
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +YN I+ +C ++ A + +M + + PD T N ++ L G+ D+A
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ES ++G V TY+ ++ +C K G ++ A +F M G+ P + T ++ +
Sbjct: 611 KLFESWVEKGKKVDVITYNTLIQTMC-KDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669
Query: 300 LVGLG 304
L G
Sbjct: 670 LSEAG 674
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 37/337 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+K + L+ +L+ LCK K + A + F P +Y ++
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L+DEM+E+K I +N+L++ + + G + EA L E+ G PD +Y+I
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA+C+ D+ + F+ + M + P+V T N ++ LC N K+++A +L + +E+G
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C +V+ AL M + PD TYN+VL L GR + A
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680
Query: 240 EVWESMEKRG----------FYPS-------------------------VSTYSVMVHGL 264
+ + + G PS Y+ +V+GL
Sbjct: 681 NMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGL 740
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
C G+ +EA + M+ +G+ SST L LV
Sbjct: 741 C-TSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLV 776
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 7/286 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQ---FFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++PS+ + +L AL + F P T+++LV G L++
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A M D + +N+LL A C+ G + EA +L M+ G P +Y+ +
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-N 181
A+ I +V+++M P+++TYN + LC+ KV+EA++L DEM G
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342
Query: 182 PDEWSYNAILAYHCDRAEVNM-ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN LA C + + ALRL+ M ++ V T+N+V+K L + G + A
Sbjct: 343 PDVVTYN-TLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALG 401
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M G P V TY+ ++H C K G + +A + MV G+
Sbjct: 402 CLNKMADDGLAPDVITYNTLIHAHC-KAGNIAKAYTLMDEMVRRGL 446
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP + + L+ ALC+ V+ A + + P T++ L++G + G + A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ MLE C + N L+ CK G +++A G +++ + G EPD +Y+ F++
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + +V+D M + P+VFTYN ++ LCKN ++EEA +L++M++RG PD
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++A C + AL L ++T + V PD +T+N+++ L +VG A ++E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M+ G P TY+ ++ LC GKL +A + M G P + T
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLC-SLGKLGKALDLLKDMESTGCPRSTIT 463
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 51/382 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGD 56
MV+ G P I + L+ ALC ++ A D A+ +P V T++IL+ L
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEA---LDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG+ A +LF+EM C D + +N+L++ +C G + +A +L++M S G +
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+ I V D M + N T+N +I LCK++K+++A++L+++MI
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +YN+IL ++C + ++ A ++ MT D TY ++ L + GR
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 237 RATEVWESMEKRGFYPSVS-----------------------------------TYSVMV 261
A +V M +G P+ TY ++
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIEILADKME 317
GLC+ G ++EA + MVD+G P S+ ML L+ LG F+ IEI+ +K++
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703
Query: 318 RSTSCTIQELANAMRGKTGFRK 339
S +A+RG RK
Sbjct: 704 LRESDV-----SAIRGYLKIRK 720
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 37/320 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + ++ LC+ HV A + D E P V TY+I+V L G+L EA
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++R C DI N+L+ A+C ++EA + R++ G PD ++++I I+A
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK------------------------- 158
C+ D H R+ + MK P+ TYN +I
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 159 ----------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M +G + + ++N ++ C +++ A LI
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + P+ TYN +L + G +A ++ E+M GF V TY +++GLC K
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC-KA 579
Query: 269 GKLEEACKYFEMMVDEGIPP 288
G+ + A K M +G+ P
Sbjct: 580 GRTQVALKVLRGMRIKGMRP 599
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 29 AHQFFDNAK----HEFTPTVK------TYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
Q FD+A ++ P Y+ L+ L + ++ ++ EM R D
Sbjct: 121 GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPD 180
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++ N+L++A+C+A + A ML EM S G PD +++ + F E I + RV
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M T N +I CK +VE+A + + I G PD+ +YN + C
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V AL+++ M +E PD TYN+V+ L + G+ + A + M RG P ++T++
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ LC +LEEA + +G+ P T +L N L +G + L ++M+
Sbjct: 361 TLIAALCTGN-RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 319 STSCTIQELA 328
S CT E+
Sbjct: 420 S-GCTPDEVT 428
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 40/322 (12%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELS---------- 61
+QLL AL ++ A + + A + +F P + Y ++R LG VG L
Sbjct: 42 EQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMR 101
Query: 62 ------------------EARKLFDE----MLERKCPV-----DILAHNSLLEAMCKAGN 94
E ++LFD+ +L + P+ D + +N LL + +
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ + EM + G +PD +++ + A C A+ + + +L+ M + P+ T+
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTT 221
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+++ + +E A ++ M+E G + + + N ++ +C V AL I + +
Sbjct: 222 LMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADG 281
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD+ TYN + L + A +V + M + G P V TY+++V+ LC K G+LEEA
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC-KNGQLEEA 340
Query: 275 CKYFEMMVDEGIPPYSSTVEML 296
MVD G P +T L
Sbjct: 341 KGILNQMVDRGCLPDITTFNTL 362
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 3/302 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P + + +L LCK + + AH F A + P V TYS L+ GL + +
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L +M+E C + + ++++++ + K G +++A +LR+MR G PDA +Y+
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + +L M P+V TY + LC++ + +EA ++LD M RG
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM-PDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y++I+ C V AL +M ++ V+ P Y+ ++ L + G+ D A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E E M + G P V T+S++++GLC G+++ + F M + G P T L +
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLC-DAGRIDTGLELFRGMAERGCVPDMVTYATLVD 497
Query: 299 RL 300
RL
Sbjct: 498 RL 499
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 163/313 (52%), Gaps = 6/313 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKH-EFTPTVKTYSILVRGLGDVGELSE 62
G P++ + ++ LCK ++ A +D+ A H F PTV TYS L+ GL E+ +
Sbjct: 60 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
KL +EM R C + + +N+L+ A+ G EA +L +M + G P+ ++ + I
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179
Query: 123 AFCEANDIHSVFRVLDS--MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
C+ +I + FRV+D M L P+V T+N ++ LCK +++ +A+ + +ERG
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +Y+ ++ A+++ AL+L+ +M + + TY+ V+ L++VGR + A
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
V M G P TY+ ++ G K++ +L EA M++ G P T L + L
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQ-RLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358
Query: 301 VGLG-FLDIIEIL 312
G F + +EIL
Sbjct: 359 CRSGRFDEAVEIL 371
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 16/306 (5%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+ FG +P++ L+ LC+ V + + A P TY+ LV L G
Sbjct: 93 IHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS 152
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI--GAEPDAFSYS 118
EA L ++M CP +++ +++ +CK G I+ A ++ EM I G PD +++
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212
Query: 119 IFIHAFCEAN---DIHSVF-RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ C+ D H+VF R L+ R PNV TY+ +I L K K++EA QLL +
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCR----PNVVTYSTLIDGLSKMAKMDEALQLLAK 268
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+E G + +Y+ ++ + A+ ++ +M +PD TYN ++ + R
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 328
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YS 290
A + M + GF+PSV TY+ + HGLC + G+ +EA + + M G P YS
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLC-RSGRFDEAVEILDYMAARGCAPNAITYS 387
Query: 291 STVEML 296
S V+ L
Sbjct: 388 SIVDGL 393
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 6/311 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + V A F P V TY L+ GLG + EA LF+E +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYSIFIHAFCEANDIHSV 133
C ++ +N++++ +CK G I+ A + +M G P +YS I C +++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
++L+ M PN TYN ++ L + +EA+ LL++M G P+ ++ I+
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 194 HCDRAEVNMALRLITR--MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C E+ A R++ M + + PD T+N VL L + R A V++ +RG
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+V TYS ++ GL K K++EA + MV+ G + T + + L+ +G ++ +
Sbjct: 241 PNVVTYSTLIDGL-SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 312 LADKMERSTSC 322
+ +M R C
Sbjct: 300 VLRQM-RDAGC 309
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MVE G + + ++ L K V V Q D P TY+ L+ G
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG---CLPDAVTYNTLIDGFFK 325
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
L EA L EMLE ++ + +L +C++G DEA +L M + G P+A +
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
YS + C+A + + M R +V P+V Y+ +I LCK K++EAY+ L+ M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
I G PD +++ ++ CD ++ L L M + +PD TY ++ L R R
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGL 264
D A ++++ M G P ST M+HGL
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 2/245 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + L+ KR+ ++ A + + F P+V TY+ L GL G
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYS 118
EA ++ D M R C + + ++S+++ +CKAG + EA G +M R P +YS
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+A I + L+ M R +P+V T++ +I LC +++ +L M ER
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y ++ C + V+ A L +M + + PDR T ++ L+ V R + A
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Query: 239 TEVWE 243
+ +
Sbjct: 544 KRIQD 548
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M G P+ ++ LCK V A +F+ + P V YS L+ GL G
Sbjct: 374 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 433
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ EA + + M+ D++ + L+ +C AG ID + R M G PD +Y+
Sbjct: 434 KIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYA 493
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ C A+ + F + M+ L P+ T +I L + + E+A ++ DE
Sbjct: 494 TLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 3/310 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIK + ++ LC + A + P V T+S L+ G+L EA
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L++EM+ R D + ++SL++ CK + EA+ ML M S G EP+ +YSI I++
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + + R+ + LV + TYN +++ C++ K+ A +L EM+ RG P
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E+ AL + +M K ++ YN+++ + + D A ++
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RNRLVG 302
S+ +G P V TY+VM+ GLC KKG L EA F M ++G P T +L R L G
Sbjct: 514 SLSVKGVKPDVLTYNVMIGGLC-KKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGG 572
Query: 303 LGFLDIIEIL 312
G + +E++
Sbjct: 573 SGVISSVELI 582
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV++G + + +L+ +CK + +A F + +V YSI++ L G
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF+EM + D++A++S++ +C G D+ MLREM P+ ++S
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + + + M + P+ TY+ +I CK ++ EA Q+LD M+ +G
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ ++ +C V+ +RL ++ + ++ D TYN +++ + G+ + A
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+++ M RG PSV TY +++ GLC G+L++A + FE M
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLC-DNGELQKALEIFEKM 480
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 152/295 (51%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ ++Y ++ +++ C+++ + A A K F P T+S L+ G G +SEA
Sbjct: 99 GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E K +++ N+L+ +C G + EA ++ M G E + +Y ++
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + + M+ ++ +V Y+ +I LCK+ +++A L +EM +G D
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKAD 278
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++I+ C+ + +++ M N++P+ T++ ++ + V+ G+ A E++
Sbjct: 279 VVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYN 338
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TYS ++ G CK+ +L EA + ++MV +G P T +L N
Sbjct: 339 EMVARGIAPDTITYSSLIDGFCKEN-RLGEANQMLDLMVSKGCEPNIVTYSILIN 392
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE +P++ ++ L++ LC + V A D K+ TY ++ + G
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF +M ER ++ ++ +++++CK GN+D+A + EM G + D +YS
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M N++PNV T++ +I K K+ EA +L +EM+ RG
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARG 344
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ C + A +++ M + P+ TY++++ + R D
Sbjct: 345 IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGM 404
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + +G TY+ +V G C+ GKL A + F+ MV G+PP T +L +
Sbjct: 405 RLFCEISSKGLVADTVTYNTLVQGFCQS-GKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L + +KM++S
Sbjct: 464 LCDNGELQKALEIFEKMQKS 483
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P L+ CK + A+Q D P + TYSIL+
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +LF E+ + D + +N+L++ C++G ++ A + +EM S G P +Y I
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ ++ + + M++ ++ + YN II +C KV++A+ L + +G
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG 519
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ P TYN++++ + +
Sbjct: 520 VKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSV 579
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E+ E M+ RGF ST ++V
Sbjct: 580 ELIEEMKMRGFAADASTIKMVV 601
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVG 58
MV G +P+I L+++ CK K V + F ++K TV TY+ LV+G G
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV-TYNTLVQGFCQSG 433
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ A++LF EM+ R P ++ + LL+ +C G + +A + +M+ Y+
Sbjct: 434 KLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYN 493
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I IH C A+ + + + S+ + P+V TYN +I LCK + EA L +M E
Sbjct: 494 IIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKED 553
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P + +YN ++ H + V ++ LI M D T MV+ +L GR D+
Sbjct: 554 GCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSD-GRLDKT 612
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G+ D+ +++EA LF+ M++ + ++ + L A+ + D G +EM G
Sbjct: 41 LRNGIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNG 99
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
E + ++ +I I+ FC + F V+ ++ PN T++ +I C +V EA
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L+D M+E P+ + N ++ C + V AL LI RM K + TY VL +
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP-- 287
+ G A +++ ME+R SV YS+++ LC K G L++A F M +GI
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLC-KDGNLDDALSLFNEMEMKGIKAD 278
Query: 288 --PYSSTVEMLRN 298
YSS + L N
Sbjct: 279 VVAYSSIIGGLCN 291
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 155/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P ++ + LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R D++ ++S++ A+CKA +D+A +L M G PD +
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + PNV TY+ ++ LCKN + EA ++ D M
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +Y +L + + + L+ M + + PD H +N+++ + + D
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
+A V+ M + G P+V Y ++ LC K G +++A YFE M+DEG+ P Y+S
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLC-KSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 293 VEML 296
+ L
Sbjct: 453 IHGL 456
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + +LH C K A + + P V TYS L+ L G
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R DI + +LL+ G + E H +L M G +PD ++I
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + V M+++ L PNV Y +I LCK+ V++A ++MI+ G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 180 ANP---------------DEWS--------------------YNAILAYHCDRAEVNMAL 204
P D+W +N+I+ HC V +
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+L M + V PD TYN ++ G+ D AT++ SM G P + TY +++G
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C+ ++++A F+ MV G+ P
Sbjct: 562 CRVS-RMDDALALFKEMVSSGVSP 584
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILV---------- 51
G SIY L++ L + + ++ A+ + TPTV TY+IL+
Sbjct: 50 GRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLD 109
Query: 52 ---RGLGDV-----------------GELSEARK------LFDEMLERKCPVDILAHNSL 85
LG+V G ++ R + M E C D+ ++N+L
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 86 LEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
L+ +C EA +L M R G+ PD SY+ ++ F + D + M
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLD 229
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
++P+V TY+ II LCK + +++A ++L+ M++ G PD +YN+IL +C +
Sbjct: 230 RGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 289
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V P+ TY+ ++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 290 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 350 GY-ATKGALVEMHALLDLMVRNGIQP 374
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV GI+P + + L+ A K++ V A F + H P V Y ++ L G
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ +I+ + SL+ +C D+A ++ EM G + ++
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TYN +I C K++EA +LL M+ G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ +C + ++ AL L M V P+ TYN++L+ L R A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ S+ K G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 665
Query: 300 LVGLGFLD 307
L+ G +D
Sbjct: 666 LLKCGRMD 673
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 149/340 (43%), Gaps = 37/340 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDV-- 57
M + G+ P++ ++ LCK V A +F+ E TP + Y+ L+ GL
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 58 ---------------------------------GELSEARKLFDEMLERKCPVDILAHNS 84
G + E+ KLFD M+ DI+ +N+
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ C AG +DEA +L M S+G +PD +Y I+ +C + + + M
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN+ TYN I++ L + A +L + + G + +YN IL C + AL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ + ++ + T+N+++ L++ GR D A +++ + G P V TYS+M L
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++G LEE F M + G S + + +L+ G
Sbjct: 702 I-EQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYN---AILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N A +A H A V+ R+ R V P HTY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRM-ARAGAGKVTPTVHTY 95
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK 141
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 155/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P ++ + LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R D++ ++S++ A+CKA +D+A +L M G PD +
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + PNV TY+ ++ LCKN + EA ++ D M
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +Y +L + + + L+ M + + PD H +N+++ + + D
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
+A V+ M + G P+V Y ++ LC K G +++A YFE M+DEG+ P Y+S
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLC-KSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 293 VEML 296
+ L
Sbjct: 453 IHGL 456
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ L++ LCK A + FD+ K P + TY L++G G L E
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM 360
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ D N L+ A K +D+A + +MR G P+ Y I
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + + M L PN+ Y +I LC +K ++A +L+ EM++RG +
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N+I+ HC V + +L M + V PD TYN ++ G+ D AT++
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SM G P + TY +++G C+ ++++A F+ MV G+ P
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVS-RMDDALALFKEMVSSGVSP 584
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV GI+P + + L+ A K++ V A F + H P V Y ++ L G
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ +I+ + SL+ +C D+A ++ EM G + ++
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TYN +I C K++EA +LL M+ G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ +C + ++ AL L M V P+ TYN++L+ L R A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ S+ K G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 665
Query: 300 LVGLGFLD 307
L+ G +D
Sbjct: 666 LLKCGRMD 673
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILV---------- 51
G SIY L++ L + + ++ A+ + TPTV TY+IL+
Sbjct: 50 GRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLD 109
Query: 52 ---RGLGDV-----------------GELSEARK------LFDEMLERKCPVDILAHNSL 85
LG+V G ++ R + M E C D+ ++N+L
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 86 LEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
L+ +C EA +L M R G+ PD SY+ ++ F + D + M
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLD 229
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
++P+V TY+ II LCK + +++A ++L+ M++ G PD +YN+IL +C +
Sbjct: 230 RGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 289
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V P+ TY+ ++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 290 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 350 GY-ATKGALVEMHALLDLMVRNGIQP 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 149/340 (43%), Gaps = 37/340 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDV-- 57
M + G+ P++ ++ LCK V A +F+ E TP + Y+ L+ GL
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 58 ---------------------------------GELSEARKLFDEMLERKCPVDILAHNS 84
G + E+ KLFD M+ DI+ +N+
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ C AG +DEA +L M S+G +PD +Y I+ +C + + + M
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN+ TYN I++ L + A +L + + G + +YN IL C + AL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ + ++ + T+N+++ L++ GR D A +++ + G P V TYS+M L
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++G LEE F M + G S + + +L+ G
Sbjct: 702 I-EQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYN---AILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N A +A H A V+ R+ R V P HTY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRM-ARAGAGKVTPTVHTY 95
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK 141
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 46/361 (12%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
EF + P +Y + L+H L K + A + F+N + P + TY+ ++ GL G L
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149
Query: 62 EARKLFDEMLER--KCPVDILAHNSLLEA-MCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+AR+L +EM+ R K DI+ +N+L+ A +CK G+++EA +L M+ G PD +Y+
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYN 209
Query: 119 IFIHA--------------------------------FCEANDIHSVFRVLDSMKRYNLV 146
IHA FC+A + VL+ M R N++
Sbjct: 210 SIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 269
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+V TY ++ LC+ +V+ A+ LL+E++ +G PD +Y +++ C E+ A +L
Sbjct: 270 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 329
Query: 207 ITRMTKE---------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ M+ N++P TYN+VL L++ G +A + + RG+ P V TY
Sbjct: 330 VKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 389
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ ++ GLCK ++ EAC + M G P T+ + L +G +D L +M
Sbjct: 390 NTLIDGLCKAN-RVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 448
Query: 318 R 318
R
Sbjct: 449 R 449
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 145/304 (47%), Gaps = 19/304 (6%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P + + LL CK + A + + + P V TY+ILV GL VG++ A
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR---------SIGAEPDAFS 116
L +E++ + D++A+ SL++ +CK+G I+EAH +++EM SI P F+
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I + + I ++ + VP+V TYN +I LCK +V EA L DEM
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P++ + +++ C V+ A L+ M+++ P+ Y ++ L + R D
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473
Query: 237 RATEVWESMEKRGFYPSVSTYS----VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
A V ++M +G Y M+HG G++ EA ++ MV G P ST
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHG-----GRVAEAMAMYDEMVARGFLPDGST 528
Query: 293 VEML 296
+ L
Sbjct: 529 SKTL 532
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 9/296 (3%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+A QFFD A + + V +Y+ L+ L G K++ ++L C +++ L
Sbjct: 9 LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ CKAG A LR + PD + ++ IH + + ++ ++M+ +
Sbjct: 69 IRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAIL-AYHCDRAEVNM 202
P++FTYN +I LCK+ +E+A +LL+EMI RG PD +YN ++ A C +V
Sbjct: 129 NPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEE 188
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL ++ M PD TYN ++ L GR A E+ ++M P + T++ ++
Sbjct: 189 ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLD 245
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
G C K G L A + E M E I P T +L N L +G + + L +++ R
Sbjct: 246 GFC-KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 10/231 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF----------DNAKHEFTPTVKTYSIL 50
+V G P + L+ LCK ++ AH+ + P + TY+I+
Sbjct: 298 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIV 357
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ GL G +S+A L +++ R D++ +N+L++ +CKA + EA + EM S+G
Sbjct: 358 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC 417
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
P+ + + C + + ++ M R PNV Y +I LCK++++++A
Sbjct: 418 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACV 477
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+LD M +G D+++Y ++ V A+ + M +PD T
Sbjct: 478 VLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 158/297 (53%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ L+ LC + VK + F D + F +Y L+ GL +GE
Sbjct: 126 ILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGE 185
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL + +R D++ ++++++ +CK +++A+ EM + G P+ +YS
Sbjct: 186 TRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYST 245
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + F +L+ M N+ PNV+TYN +I LCK KV+EA +LL EM +G
Sbjct: 246 LIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKG 305
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN++L C ++ A L +M K + P+++TY ++ L + GR A
Sbjct: 306 QPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQ 365
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++++ + +G V TY+VM+ GLC K+G ++A M D G P + T +++
Sbjct: 366 KLFQHLLVKGCCIDVRTYNVMISGLC-KEGMFDKALAMKSKMEDNGCIPNAVTFDII 421
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I + ++L L K KH A + + P + T +IL+ +G+++ + +
Sbjct: 63 PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D + N+L++ +C G + + ++ + G + + SY ++ C+
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++L ++ + P+V Y+ II LCK++ V +AY EM RG P+ +
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C ++ A L+ M +N+ P+ +TYN+++ L + G+ A ++ M
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMH 302
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G V TY+ ++ GLCK + L++A F M GI P T L + L G L
Sbjct: 303 HKGQPADVVTYNSVLDGLCKSQ-NLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRL 361
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P++ L+ C + A + P V TY+IL+ L G++ EA
Sbjct: 235 GIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEA 294
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+KL EM + P D++ +NS+L+ +CK+ N+D+A + +M+ G +P+ ++Y+ I
Sbjct: 295 KKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDG 354
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + ++ + +V TYN +I LCK ++A + +M + G P+
Sbjct: 355 LCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPN 414
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+++ I+ ++ E + A +L+ M + ++
Sbjct: 415 AVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ +L + I+ +L + K + A + R+M G EP+ + +I I+ FC
Sbjct: 53 FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F VL + + P+ T N +++ LC +V+ + D+++ +G ++ S
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +L C E A++L+ + + PD Y+ ++ L + ++A + + M
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMN 232
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
RG +P+V TYS ++ G C G+L A M+ + I P T +L + L
Sbjct: 233 ARGIFPNVITYSTLIWGFC-LAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL 285
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 5/260 (1%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + ++ L + A L +M + +++ N L+ C G + +
Sbjct: 62 TPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFS 121
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L ++ +G +PD + + + C ++ D + N +Y ++ LC
Sbjct: 122 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLC 181
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + A +LL + +R PD Y+ I+ C VN A + M + P+
Sbjct: 182 KIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVI 241
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY+ ++ G+ A + M + P+V TY++++ LC K+GK++EA K
Sbjct: 242 TYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC-KEGKVKEAKKLLAE 300
Query: 281 MVDEGIPP----YSSTVEML 296
M +G P Y+S ++ L
Sbjct: 301 MHHKGQPADVVTYNSVLDGL 320
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 4/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G +P Y LL ALCK VK A + F++ + + P ++ ++ L+ G G+L
Sbjct: 196 MPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKL 255
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+++ +M E DI+ +LL AG + +A+ +L +MR G EP+A Y++
Sbjct: 256 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVL 315
Query: 121 IHAFCEAND-IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + RV M+RY ++ TY +I CK +++ Y +LD+M ++G
Sbjct: 316 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 375
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + +Y IL H + + L LI +M + PD YN+V++L A
Sbjct: 376 VMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAV 435
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLR 297
+W ME G P + +M++G +G L EAC +F+ MV GI P T++ L
Sbjct: 436 RLWNEMEANGLSPGADMFVIMINGFT-SQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLL 494
Query: 298 NRLV 301
N L+
Sbjct: 495 NTLL 498
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
S+++ + K G++ EMR E P+ F + I F AN + VLD M
Sbjct: 139 SMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFV--VLIRRFASANMVKKAVEVLDEM 196
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+Y P+ + + C++ LCKN V++A ++ ++M E+ P+ + ++L C ++
Sbjct: 197 PKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREK-IPPNLRYFTSLLYGWCREGKL 255
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A ++ +M + + PD + +L G+ A ++ M KRG+ P+ + Y+V+
Sbjct: 256 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVL 315
Query: 261 VHGLCKKKGKLEEACKYF 278
+ LC+ + +++EA + F
Sbjct: 316 IQALCRTEKRMDEAMRVF 333
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 149/277 (53%), Gaps = 2/277 (0%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
+ CK V A + D +++ + P V TY++L+ G+ G L EA K + M C
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+++ HN +L +MC G +A +L +M G P +++I I+ C +
Sbjct: 149 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 208
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+L+ M + PN +YN ++ CK +K++ A + LD M+ RG PD +YN +L C
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 268
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+V++A+ ++ +++ + P TYN V+ L +VG+ +RA ++ + M ++G P +
Sbjct: 269 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 328
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
TYS +V GL ++GK++EA K+F + GI P + T
Sbjct: 329 TYSSLVSGL-SREGKVDEAIKFFHDLEGLGIRPNAIT 364
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 152/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + + L++ +CK + A +F +N + P V T++I++R + G +A
Sbjct: 112 GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA 171
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +ML + C ++ N L+ +C+ G + A +L +M G P++ SY+ +H
Sbjct: 172 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 231
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + LD M P++ TYN ++ LCK+ KV+ A ++L+++ +G +P
Sbjct: 232 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 291
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ + A++L+ M ++ + PD TY+ ++ L R G+ D A + +
Sbjct: 292 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 351
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+E G P+ TY+ ++ GLCK + + + A + M+ + P +T +L
Sbjct: 352 DLEGLGIRPNAITYNSIMLGLCKSR-QTDRAIDFLAYMISKRCKPTEATYTIL 403
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 122/233 (52%), Gaps = 1/233 (0%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
++ CK + +A +L EMR+ G++PD +Y++ I+ C+ + + L++M Y
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
PNV T+N I+R +C + +A +LL +M+ +G +P ++N ++ + C + + A+
Sbjct: 149 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 208
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ +M P+ +YN +L + + DRA E + M RG YP + TY+ ++ LC
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 268
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
K GK++ A + + +G P T + + L +G + L D+M R
Sbjct: 269 -KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 2/198 (1%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+S ++ C+ + + ++LD M+ P+V TYN +I +CK +++EA + L+ M
Sbjct: 84 GFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 143
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G P+ ++N IL C A +L++ M ++ P T+N+++ L R G
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
RA ++ E M G P+ +Y+ ++HG CK+K K++ A +Y ++MV G P T
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEK-KMDRAIEYLDIMVSRGCYPDIVTYNT 262
Query: 296 LRNRLVGLGFLDI-IEIL 312
L L G +D+ +EIL
Sbjct: 263 LLTALCKDGKVDVAVEIL 280
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A C V A + D P V TY++LV G+ G L EA K
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M +++ HN +L +MC G +A +L EM G P +++I I+ C
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ +L+ M + PN +YN ++ CK +K++ A Q L+ M+ RG PD +
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V+ A+ L+ +++ + P TYN V+ L +VG+ D+A E+ M
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+G P V TYS ++ GL ++GK+EEA K+F + G+ P + T
Sbjct: 254 GKGLKPDVITYSSLIAGL-SREGKVEEAIKFFHDVEGFGVKPNAFT 298
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 156/299 (52%), Gaps = 6/299 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + + L++ +CK + A +F ++ + P V T++I++R + G +A
Sbjct: 46 GCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDA 105
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL EM+ + C ++ N L+ +C+ G + A +L +M + G P++ SY+ +H
Sbjct: 106 EKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + + L+ M P++ TYN ++ LCK+ KV+ A +LL+++ +G +P
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV 225
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ + + A+ L+ M + + PD TY+ ++ L R G+ + A + +
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH 285
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+E G P+ TY+ ++ GLCK + + + A + M+ +G P Y+ +E + N
Sbjct: 286 DVEGFGVKPNAFTYNSIMFGLCKAQ-QTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D LE++C D++ + L+EA C + +A +L EM S G +PD +Y++ ++
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + L+SM Y PNV T+N I+R +C + +A +LL EM+ +G +P
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M P+ +YN +L + + DRA + E
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG YP + TY+ M+ LC K GK++ A + + +G P T + + L +G
Sbjct: 182 MVSRGCYPDIVTYNTMLTALC-KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240
Query: 305 FLD 307
D
Sbjct: 241 KTD 243
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G PS+ + L++ LC++ + A + H TP +Y+ L+ G +
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N++L A+CK G +D A +L ++ S G P +Y+
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +L M+ L P+V TY+ +I L + KVEEA + ++ G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN+I+ C + + A+ + M + P +Y ++++ + G A
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E+ + RG S V+V
Sbjct: 352 ELLNELCSRGVVKKSSAEQVVV 373
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G P+ + LLH CK K + A Q+ + P + TY+ ++ L G+
Sbjct: 147 MPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGK 206
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +++ + C ++ +N++++ + K G D+A +L EMR G +PD +YS
Sbjct: 207 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSS 266
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ + + PN FTYN I+ LCK ++ + A L MI +G
Sbjct: 267 LIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKG 326
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P E SY ++ + AL L+ + V+ +V++L
Sbjct: 327 CKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVRL 375
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ ++ R ++ PD TY ++++ +A ++ + M RG P V TY+V+V+G
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSC 322
+C K+G+L+EA K+ M G P T ++ + G ++D ++L + + + S
Sbjct: 61 MC-KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119
Query: 323 TI 324
++
Sbjct: 120 SV 121
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P+++ + LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R D++ +NS++ A+CKA +D+A +L M G PD +
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + P+V TY+ ++ LCKN + EA ++ D M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG P+ +Y +L + + + L+ M + + PD + +++++ + G+ D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A V+ M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILC-KSGRVEDAMLYFEQMIDEGLSP 439
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + +LH C K A F + + P V TYS+L+ L G
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EARK+FD M +R +I + +LL+ G + E HG+L M G PD + +SI
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P YN+++ C + A LI M + + +N ++ + GR +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + G P+V TY+ +++G C GK++EA K MV G+ P + T L N
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYC-LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 300 LVGLGFLDIIEILADKMERS 319
+ ++ +L +ME S
Sbjct: 556 YCKISRMEDALVLFKEMESS 575
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L++ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 45 GRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLD 104
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164
Query: 121 IHAFCEAND-----------------------------IHSVFRVLDSMKRYN------- 144
+ C+ N I+ F+ DS K Y+
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 145 --LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
++P+V TYN II LCK + +++A ++L+ M++ G PD +YN+IL +C +
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V PD TY++++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 345 GY-ATKGALVEMHGLLDLMVRNGIHP 369
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 36/359 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ + +NSL+ +C + A ++ EM G + ++
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ + M R + PNV TYN +I C K++EA +LL M+ G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK------------------------------- 268
E++ + + G +STY++++HGLCK K
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 269 ---GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
G+ +EA F G+ P T ++ ++G G L+ ++ L ME CT+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME-DNGCTV 719
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 15/232 (6%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC------EANDIH 131
D+ + L+ C+AG +D L + G DA +++ + C +A DI
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI- 144
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE---RGANPDEWSYN 188
VL M +PNVF+YN +++ LC + +EA +LL M + G+ PD SY
Sbjct: 145 ----VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ + + A M ++PD TYN ++ L + D+A EV +M K
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G P TY+ ++HG C G+ +EA + + M +G+ P T +L + L
Sbjct: 261 GVMPDCMTYNSILHGYC-SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP+ L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK D+A M + + + + +A +++I
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + LVPN +TY + + +EE QL M + G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
D N I+ R E+ A ++ + +++ + T ++ + LL
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK---ENVMPDRHTY 222
E+A + DE++ RG + N LA R A+ RM + + V PD TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALA-DVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF ++ ++ GLC K
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 136
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +PS L+ LC + A Q FD E F P V TY L+ GL VG
Sbjct: 115 ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGN 174
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A + M +R C ++ ++++++++CK + EA + +M + G P+ F+YS
Sbjct: 175 TSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 234
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C R+ +M ++P+ T+N ++ LCK V +A+ ++D MI+
Sbjct: 235 LIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSD 294
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+++ HC R+E+ + + M ++ +P +Y ++ ++ D+A
Sbjct: 295 LKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAM 354
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++G P TY+ ++HGLC G+L +A F MV G P T +L +
Sbjct: 355 GLFEEMSQQGLIPDTVTYNTLIHGLC-HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413
Query: 300 L 300
L
Sbjct: 414 L 414
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P+ + L+H LC H K A + F H + P T++ LV L G
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGM 279
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + D M++ D++ +NSL++ C + + + M G P SY+
Sbjct: 280 VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTT 339
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ + + + M + L+P+ TYN +I LC ++ +A L EM+ G
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y + Y C + A+ L+ + N+ PD H Y++V+ + R G + A
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ + +G +P V TY++M++GLC ++G L EA K F M + G P + T ++
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLC-QQGLLAEASKLFGEMDENGCSPNACTYNLI 515
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 1/264 (0%)
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+V + +A LF+ ML + P I+ + LL ++ + + + ++M S G + +
Sbjct: 31 NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+ +I I++FC N + F VL + + P+ T+ +IR LC K+ EA QL D+M
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G PD +Y ++ C + A+R + M + N P Y+ ++ L + +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A ++ M +G P+ TYS ++HGLC G +EA + F M+ I P T
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLC-ILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 296 LRNRLVGLGFLDIIEILADKMERS 319
L + L G + + D M +S
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQS 293
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 130/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KP + + L+ C R + FD + P+V +Y+ L+ G +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM ++ D + +N+L+ +C G + +A + EM G PD +Y I
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ + + +L ++ NL P++ Y+ ++ +C+ ++E A L ++ +G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ C + + A +L M + P+ TYN++ + +R RA
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++++ M RGF VST +++V L
Sbjct: 530 QLFQEMLSRGFSIDVSTTTLLVEML 554
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 1/247 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ +S L+ + + S L+ +M P + N L+ + C + A +
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L ++ +G +P +++ I C I ++ D M P+V TY +I LCK
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
A + L M +R P Y+ I+ C ++ AL L + M + + P+ T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ ++ L +G + A ++ +M R P T++ +V LC K+G + +A ++M
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC-KEGMVVKAHYVVDVM 290
Query: 282 VDEGIPP 288
+ + P
Sbjct: 291 IQSDLKP 297
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV +G P + L LCK + A + P + YSI++ G+ GE
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR LF ++ + D+ + ++ +C+ G + EA + EM G P+A +Y++
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
F N+ ++ M +V T ++ L + + Q+L E ++
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G +PS+ + LL ALC V A + F + +P TYS LV GLG G + EA
Sbjct: 200 GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEA 259
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F EM++R VD++ +NSLL + KAGN+D +++EM G PDAFS++ + A
Sbjct: 260 HKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA 319
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+AN + V M P++ +YN +I + +A Q+L+EM+E G P+
Sbjct: 320 LGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPE 379
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ + +V+ A ++ M PD TYN ++ +L + G RA +++
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
M+ +G P +Y+V + GL +L+EA F+ M G P
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDD-RLDEALVLFKDMKAVGCP 482
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 161/311 (51%), Gaps = 5/311 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G+ P+I + L+ A K + +A F K F P+V TY+IL+ L G
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ ARKLF +M C D +++L+ + K+G ++EAH + REM G D +Y+
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +A ++ V++++ M R P+ F++N I+ L K K + A ++ M+E G
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ + + A +++ M + +P+ TYN ++ L G+ D A
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V E ME G P V TY+ ++ + K+G+ + A + F+ M D+G+ P + + + R
Sbjct: 401 AVLEEMETAGCRPDVVTYNRLMD-MLGKRGENQRAARLFQQMKDKGVEPDTLSYAV---R 456
Query: 300 LVGLGFLDIIE 310
+ GL F D ++
Sbjct: 457 IDGLAFDDRLD 467
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 169/341 (49%), Gaps = 7/341 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+V+ G + + + L+ + + A + F K + + P TY LV LG G
Sbjct: 91 LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR FD MLER +I +N L++A K G +D A G+ EM+ G +P +Y+I
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C A + + ++ M P+ +TY+ ++ L K+ +VEEA+++ EM++RG
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN++LA ++ +L+ M+++ PD ++N ++ L + + D A
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EV+ M + G P + +Y++++ + G +A + E MV+ G P + T L +
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYA-RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHW 389
Query: 300 LVGLGFLDIIEILADKME----RSTSCTIQELANAMRGKTG 336
L G +D + ++ME R T L + M GK G
Sbjct: 390 LATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD-MLGKRG 429
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 137/277 (49%), Gaps = 2/277 (0%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L +L+ A + A F+ A+ +PTV ++ L+ L + GE A ++ +++
Sbjct: 33 LVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLV 92
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
++ C +D A+N L+ ++G +D A M REM+ G+EPD ++Y ++A +A +
Sbjct: 93 QKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQ 152
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
D+M L PN+ TYN ++ K +++ A L EM RG P +YN +L
Sbjct: 153 EARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILL 212
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C V A +L +MT + PD +TY+ ++ L + GR + A +V+ M RG
Sbjct: 213 DALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA 272
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ Y+ ++ L K G ++ K + M +G P
Sbjct: 273 VDLVNYNSLLATLA-KAGNMDRVWKLMKEMSRKGFHP 308
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L+ G + +A LF++ C + A L++ + +G + A + +++ G
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ D F+Y++ I F + + S + MK P+ +TY ++ L K +V+EA
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
D M+ERG P+ +YN ++ +++MAL L M + P TYN++L L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
GR A +++ M G P TYS +V+GL K G++EEA K F MVD G+
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL-GKSGRVEEAHKVFREMVDRGVAVD 274
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMER 318
L L G +D + L +M R
Sbjct: 275 LVNYNSLLATLAKAGNMDRVWKLMKEMSR 303
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L G L L EM+ P+ L+ A + +A + + S P
Sbjct: 5 LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT 64
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+++ I + + V + + + F YN +IR ++ +++ A ++
Sbjct: 65 VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
EM +G+ PDE++Y ++ V A M + + P+ TYN+++ +VG
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D A ++ M++RGF PSV TY++++ LC G++ A K F M +G P S T
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALC-SAGRVGAARKLFHKMTGDGCSPDSYTY 243
Query: 294 EMLRNRLVGLG 304
L N GLG
Sbjct: 244 STLVN---GLG 251
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + + L+ + + A Q + + F P KTY+ L+ L G+
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + +EM C D++ +N L++ + K G A + ++M+ G EPD SY++
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
I + + + MK + Y +IR + E QL E
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G +P + + ++ LCK+ ++ A +F D K F P V TY+IL+ G G
Sbjct: 363 MVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGH 422
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K+ + M + ++ + +N L+ A+CK G I +A M EM S G +PD ++++
Sbjct: 423 FEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNS 482
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + + M ++ N TYN +I + E +++A +L+ EM RG
Sbjct: 483 LIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C L LI +M E + P ++ N+++ R G+ + A
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M +RG P + TY+ +++GLC K G+ +EA F + +GI P + T L +R
Sbjct: 603 QFLRDMIQRGLTPDIVTYNSLINGLC-KMGRFQEALNLFNGLQAKGIHPDAVTYNTLISR 661
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 6/320 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL-FDEMLERK 74
L+H LC+ V A + P Y+ L+ G G EA+ L + M+
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPN---PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAG 367
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D N +++ +CK G + A L EM G EP+ +Y+I I FC+
Sbjct: 368 FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+V++SM L N YNC+I LCK+ K+++A Q+ EM +G PD +++N+++
Sbjct: 428 KVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ AL L M E V+ + TYN ++ +R+ +A ++ M RG
Sbjct: 488 CKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILA 313
TY+ ++ LC K G E+ E M E I P ++ +L N G + D ++ L
Sbjct: 548 ITYNGLIKALC-KTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 314 DKMERSTSCTIQELANAMRG 333
D ++R + I + + G
Sbjct: 607 DMIQRGLTPDIVTYNSLING 626
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 152/361 (42%), Gaps = 35/361 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++Y ++ A C V A D KH P Y +L+ L +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA KL +EM C D+ N ++ +CKAG I EA + M DA
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV--------------------------------P 147
+H C + +L + N V P
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ FT+N +I LCK + A + LDEM+++G P+ +Y ++ C + A +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M+ + + + YN ++ L + G+ A +++ M +G P + T++ +++GLCK
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQEL 327
K+EEA + M+ EG+ + T L + + L + + L +M R C + +
Sbjct: 491 D-KMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM-RFRGCPLDNI 548
Query: 328 A 328
Sbjct: 549 T 549
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 7/282 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P+ + +L L KVA + F+D +PTV T+ ++++ V E+ A
Sbjct: 162 EPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACS 221
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +M + C + + + L+ A+ + ++EA +L EM +G EPD +++ IH C
Sbjct: 222 LLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLC 281
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A IH ++ D M + + ++ LC+ KV+EA +L ++ NP+
Sbjct: 282 KAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKI----PNPNTV 337
Query: 186 SYNAILAYHCDRAEVNMALRLITR-MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
YN ++ + A L+ + M PD T+N+++ L + G A E +
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M K+GF P+V TY++++ G C K+G EEA K M +G+
Sbjct: 398 MVKKGFEPNVITYTILIDGFC-KQGHFEEASKVVNSMSAKGL 438
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKC--PVDILAHNSLLEAMCKAGNIDE-AHGMLR 103
+ +++R G G +A +L +M C P ++N +LE + AGN + A +
Sbjct: 132 FILIMRYYGKAGLPGQATRLLLDMWGVYCFEPT-FKSYNVVLEILV-AGNCPKVAPNVFY 189
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+M S G P +++ + + AFC N++ S +L M ++ VPN Y +I L +N
Sbjct: 190 DMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENN 249
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-------- 215
+V EA +LL+EM G PD ++N ++ C ++ A +L RM +
Sbjct: 250 RVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQG 309
Query: 216 ---------------------MPDRHT--YNMVLKLLVRVGRFDRATE-VWESMEKRGFY 251
+P+ +T YN ++ V GRF+ A + ++++M GF
Sbjct: 310 YLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P T+++M+ GLC KKG L A ++ + MV +G P T +L
Sbjct: 370 PDAFTFNIMIDGLC-KKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 14 DQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDE 69
+ L+ ALCK K + + Q F E P++ + +IL+ G++++A + +
Sbjct: 551 NGLIKALCKTGATEKCLGLIEQMFG---EEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M++R DI+ +NSL+ +CK G EA + +++ G PDA +Y+ I +C
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ ++L +PN T++ +I KN E + +L
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 158/309 (51%), Gaps = 13/309 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G +P + LL LCK K+ KVA + F+ K+++ P K Y+IL+ G V ++
Sbjct: 179 GREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKVNRNDMSQ 238
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAEPDA 114
K +M++ +++ +N LL +C+ + + A +L+EMR G EPD
Sbjct: 239 KFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRGIEPDV 298
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
SYSI +H + A+ + SMK + P V TY +I+ L ++E+A +LL E
Sbjct: 299 TSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAERLLHE 358
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM--TKENVMPDRHTYNMVLKLLVRV 232
M G P +YN + R +V AL L +M PD H+Y+++L + V++
Sbjct: 359 MASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLGMFVKL 418
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ TE+W M + P + +Y++++HG C+ + K EAC++F M+++G P T
Sbjct: 419 NQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENE-KWREACQFFMEMIEKGFLPQKIT 477
Query: 293 VEMLRNRLV 301
E+L L+
Sbjct: 478 FEILYRGLI 486
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR----------KHVKVAHQFFDNAKHE-FTPTVKTYSI 49
M++ GI+P++ + LL+ +C+ + V+ A + P V +YSI
Sbjct: 244 MIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRGIEPDVTSYSI 303
Query: 50 LVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
++ + +F M +R CP + + S+++ + G +++A +L EM S
Sbjct: 304 VLHVYSRAHKAELCLCMFRSMKDRGICPT-VATYTSVIKCLASCGRLEDAERLLHEMASE 362
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR--YNLVPNVFTYNCIIRKLCKNEKVE 166
G P +Y+ F + D+ + MK P++ +Y+ ++ K +
Sbjct: 363 GVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILLGMFVKLNQHG 422
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+L ++M E PD SY ++ C+ + A + M ++ +P + T+ ++
Sbjct: 423 TVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFLPQKITFEILY 482
Query: 227 KLLVRVGRFDRATEVWESMEKR 248
+ L++ W ++KR
Sbjct: 483 RGLIQADML----RTWRRLKKR 500
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 85/232 (36%), Gaps = 39/232 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI+P + +LH + ++ F + K PTV TY+ +++ L G
Sbjct: 289 MRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGR 348
Query: 60 LSEARKLFDEML-ERKCPV---------------DILAHNSLLEAM-----CKAGNIDEA 98
L +A +L EM E CP D++ L + M A +I
Sbjct: 349 LEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSY 408
Query: 99 H---GMLREMRSIGA-------------EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
H GM ++ G PD SY++ IH FCE + M
Sbjct: 409 HILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIE 468
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN-PDEWSYNAILAY 193
+P T+ + R L + + + +L + E A DE+ I Y
Sbjct: 469 KGFLPQKITFEILYRGLIQADMLRTWRRLKKRVDEEAAKFGDEYKLYHIKPY 520
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 167/320 (52%), Gaps = 5/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLG-DVGE 59
MV + P + + L++ LCK V A F+P V TYS L+ GL ++
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELRR 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR+L ++M+ C DI+++N+L+ + + + EA + + G EP+ +Y+I
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ F + + ++ L P+ TY I LCK +VE+A +L +M E+G
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD S+NA++ C V+ A L++ M + P+ ++N ++ R G++ +A
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--KKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
++ M KRG P+V TY+++V GLCK ++G+++EA F+ M+++G P T L
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478
Query: 298 NRLVGLGFLDIIEILADKME 317
+ L G LD L ME
Sbjct: 479 DGLGKAGKLDDARRLLGAME 498
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 153/296 (51%), Gaps = 5/296 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G KP I + L+H L + + V A + F + + + P V TY+IL+ GL
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA +LF +++ D + + ++ +CKAG +++A ML++M G PD S++
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + +L M+ PN ++N +I C+ K ++A EM++RG
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 180 ANPDEWSYNAILAYHC---DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
P +YN ++ C + A+ L M ++ +PD TY+ ++ L + G+ D
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
A + +ME +G P+V TY+ ++ GLC K++EA + F MV++G P + T
Sbjct: 489 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLD-KVDEALELFVAMVEKGCVPDTIT 543
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P Y + LL +L K ++ AH+F + + + T++I + GL + +A+ +F
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVF 73
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
D M + + + +N+LL +C G + +A + M G PD +Y+ +H FC+
Sbjct: 74 DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ ++ D + VP+V TYN +I CK +K++EA ++L M+ PD +Y
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR-VGRFDRATEVWESME 246
N+++ C V+ A LI + P+ TY+ ++ L R + R + A ++ E M
Sbjct: 194 NSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMV 250
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
G P + +Y+ ++HGL +++G + EA K F ++ +G P T +L + L+
Sbjct: 251 LNGCKPDIVSYNALIHGLAREQG-VSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 40/314 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + + L+ L K V A + F KH P TY++ + GL G + +A
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS------- 116
+ +M E+ C D+++HN+++ +CK +DEA +L M + G P+A S
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Query: 117 ----------------------------YSIFIHAFCEAND---IHSVFRVLDSMKRYNL 145
Y+I + C+A I + D+M
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP+V TY+ +I L K K+++A +LL M +G P+ ++YN++++ C +V+ AL
Sbjct: 468 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALE 527
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L M ++ +PD TY ++ L + D+A +++ + G P+ Y ++ GLC
Sbjct: 528 LFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587
Query: 266 KKKGKLEEACKYFE 279
+++EA K +
Sbjct: 588 -AVARVDEALKLLQ 600
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 4/247 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P + + +++ LCK K V A + + +P +++ L+ G G+
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKA---GNIDEAHGMLREMRSIGAEPDAFS 116
+A F EML+R ++ +N L++ +CKA G I EA + M G PD +
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS I +A + R+L +M+ +PNV+TYN +I LC +KV+EA +L M+
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
E+G PD +Y I++ C + V+ AL L + V+P Y ++ L V R D
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVD 593
Query: 237 RATEVWE 243
A ++ +
Sbjct: 594 EALKLLQ 600
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 156/293 (53%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI+P + L+ L+ ALC+ V+ A + + H P T++ L++G + G
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +M+E C + N L+ CK G +++A G +++ + G EPD +Y+
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNT 305
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+H C+ + +V+D M + P+VFTYN +I L KN +++EA ++++M++RG
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ C + + AL L +T + + PD +T+N+++ L +VG
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++E M+ G P TY++++ LC GKL A + M G P + T
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLC-SMGKLVNALDLLKEMESNGCPRSTVT 477
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 43/338 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + +H LC+ HV A + D E P V TY+ ++ L GEL EA
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++R C D N+L+ A+C ++EA + RE+ G PD ++++I I+A
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII--------------------------- 156
C+ D H R+ + MK P+ TYN +I
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 157 --------RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M G + ++N ++ C ++ A LI
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M KE + P TYN +L + G +A ++ E+M GF V TY +++GLC K
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLC-KA 593
Query: 269 GKLEEACKYFEMMVDEGIPP----YSSTVEML--RNRL 300
G+ + A K M +GI P Y+ ++ L RN L
Sbjct: 594 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 163/340 (47%), Gaps = 10/340 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y + L++ALCK + + F+ K P TY+IL+ L +G+L A
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM CP + +N++++A+CK I+EA + +M + G A +++ I
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A I +++ M + L P+ TYN I+ CK +++A +L+ M G D
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ C +AL+L+ M + + P YN V++ L R A ++
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFR 639
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + G P TY ++ GLC+ G ++EA + MV++G P S+ ML L+ L
Sbjct: 640 EMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 699
Query: 304 G----FLDIIEILADKMERSTSCTIQELANAMRGKTGFRK 339
G + IE++ +K + S +A+RG RK
Sbjct: 700 GMDDYLISAIELIIEKAKFRESDV-----SAIRGYLKIRK 734
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ L+ L + + +++EM +R D++ N+L++A+C+A + A ML EM
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
S PD +++ + F E I + RV M P T N +I CK +VE
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+A + + I G PD+ +YN + C V+ AL+++ M +E PD TYN V+
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L + G D A + M RG P +T++ ++ LC + +LEEA + +G+
Sbjct: 343 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN-RLEEALDLARELTVKGL 401
Query: 287 PPYSSTVEMLRNRLVGLG 304
P T +L N L +G
Sbjct: 402 SPDVYTFNILINALCKVG 419
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+I D D+LL AL ++ + A Q ++A + +F P+ Y +++ LG G L
Sbjct: 52 AISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGL 111
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR-EMRSIGAEPDAFSYSIFIHAFC 125
EM S +E+ + D+A ++R ++ + G + D Y+ ++
Sbjct: 112 VREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLA 171
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
E + + + V + M + P+V T N +I+ LC+ +V A +L+EM PDE
Sbjct: 172 EGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDET 231
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ + + ALR+ T+M + P R T N+++ ++GR + A +
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
GF P TY+ VH LC + G + A K ++M+ EG P T + N L G
Sbjct: 292 IADGFEPDQVTYNTFVHCLC-QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350
Query: 306 LDIIEILADKM 316
LD + + ++M
Sbjct: 351 LDEAKGIVNQM 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G++PS + +L CK+ +K A + + F V TY L+ GL G
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL M + A+N +++++ + N+ +A + REM +G PDA +Y I
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKI 655
Query: 120 FIHAFCEAND-IHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
C I F L M +P ++ + L
Sbjct: 656 VFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 151/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDVGE 59
E G P ++ + LL +LC + A T P V Y+ ++ G G+
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ ++S++ A+CKA +D+A LR+M + G PD ++Y+
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R +++P+V N ++ LCK K++EA + D M +G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SY +L + + + L M + + PD +T+N+++K G D+A
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALC-RIGKMDDAMEKFNQMIDQGVVP 464
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 39/344 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI P + ++HALCK + + A F ++ P TY+ L+ G G+
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM + D++A N+L+ ++CK G I EA + M G PD FSY+I
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 120 FIHAFCE-------------------ANDIHSVFRVL-----------------DSMKRY 143
++ + A DI++ F VL + M+ +
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT-FNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V TY +I LC+ K+++A + ++MI++G PD+++Y+ ++ C + A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
LI+ + + D + ++ L ++GR A +++ G +P Y++++ G
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 546 YC-LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+ L+ +LCK +K A FD A P V +Y+I++ G G L +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LFD ML DI N L++A G +D+A + EMR G +P +Y I A
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + M +VP+ + Y+C+I+ C + + +A +L+ E++ G D
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ +I+ C V A + + PD YNM++ VG+ ++A V+++
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M G P+V Y +V+G C K G+++E F M+ +GI P +
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYC-KIGRIDEGLSLFREMLQKGIKPST 606
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P IY + L+ A + A F+ + H P V TY ++ L +G+
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M+++ D A++ L++ C G++ +A ++ E+ + G D +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + D L P+ YN ++ C K+E+A ++ D M+ G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ +C ++ L L M ++ + P YN+++ L GR A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ M + G + TYS+++ GL K +
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNR 655
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P + L+ C ++ A + FD P V Y LV G +G +
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML++ + +N +++ + +AG A EM G + +YSI
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ ++ T N +I + + +VEEA L + G
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +Y+ ++ V A + + M PD N V++ L++ RA
Sbjct: 708 VPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 768 YLSKIDERNFSLEHLTAMLLVD-LFSSKGTCREQIRFL 804
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA L DE+ R PV N L A+ +A + + G+ P A + ++F
Sbjct: 49 EAHDLLDELQRRGTPVLDRDLNGFLAALARAPS----------SAACGSGP-ALAVALFN 97
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A A RVL P +TY ++ + + E A +++ G
Sbjct: 98 RAASRAQGP----RVLS--------PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLR 145
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATE 240
D + +L C+ + AL ++ T E +PD +YN++LK L G+ +A +
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205
Query: 241 VWESMEKRGFY--PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ M + G P V Y+ ++ G K+ G + +AC F+ MV GIPP YSS V
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKE-GDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264
Query: 295 ML 296
L
Sbjct: 265 AL 266
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+++ G++P++ L++ C + A + FD + P V +YSI+++GL VG+
Sbjct: 152 IIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGK 211
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+E KL + M C D++ +N++++ +CK ++EA + +M+ G P +Y+
Sbjct: 212 TTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +L+ MK N++P++ ++ +I +CK +V EA +L M E G
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG 331
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C R EV A ++ M + MPD ++++++ + R D A
Sbjct: 332 VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAK 391
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++ M RG P +Y+ ++ GLC+ + L EA + F+ M G PP T +L +
Sbjct: 392 QLFDEMTHRGLIPDTVSYNTLISGLCQARRPL-EAEELFKDMHSNGYPPNLVTYSILLDC 450
Query: 300 LVGLGFLDIIEILADKMERS 319
L G+LD L ME S
Sbjct: 451 LSKQGYLDQAMGLFRAMENS 470
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 152/285 (53%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + + ++ LCK + V A F K PTV TY+ L+ GL ++G EA
Sbjct: 226 GCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEA 285
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +EM D++A + L++ MCK G + EA +L+ M +G EPD +Y+ ++
Sbjct: 286 FGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C ++ +V + M +P+VF+++ ++ CK ++++EA QL DEM RG PD
Sbjct: 346 YCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPD 405
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN +++ C A L M P+ TY+++L L + G D+A ++
Sbjct: 406 TVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFR 465
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ME G P + TY++M+ G+C K GK ++A + F + +G+ P
Sbjct: 466 AMENSGLKPDLVTYNIMIDGMC-KYGKFKDARELFAELSVKGLQP 509
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D+L+ L+ C+ ++D +L ++ +G EP+ ++S I+ FC I +
Sbjct: 125 DVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF 184
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
D M PNV +Y+ II+ LC+ K E +LL+ M G PD YN I+ C
Sbjct: 185 DVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD 244
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
VN A+ + +M ++P TY ++ L +GR+ A + M+ P + +
Sbjct: 245 RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAF 304
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
SV++ +C K+G++ EA + M + G+ P +T L N
Sbjct: 305 SVLIDIMC-KEGEVSEARVILKTMTEMGVEPDVATYNTLMN 344
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M E G++P + + L++ C R V A + F+ + P V ++SILV G
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++LFDEM R D +++N+L+ +C+A EA + ++M S G P+ +YSI
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +M+ L P++ TYN +I +CK K ++A +L E+ +G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
P+ W + C ++ A + +M K++ P + N
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A F+ M+ I+ L A+ + + + ++M G D S +I
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + F VL + + L PNV T++ +I C K+ A +L D M+ RG
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY+ I+ C + ++L+ M PD YN ++ L + + A
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M+ G P+V TY+ ++HGL + G+ +EA M I P
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGL-RNLGRWKEAFGLLNEMKGGNIMP 299
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+ +CK V A + P V TY+ L+ G E+ EAR
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+F+ M+ + D+ + + L+ CKA IDEA + EM G PD SY+ I
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+A + M PN+ TY+ ++ L K +++A L M G PD
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ C + A L ++ + + P+ + + + G D A + +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536
Query: 245 MEKRGFYPS 253
MEK P+
Sbjct: 537 MEKDDCSPA 545
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P ++ L++ CK K + A Q FD H P +Y+ L+ GL
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +LF +M P +++ ++ LL+ + K G +D+A G+ R M + G +PD +Y+I
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + L PN + I +CK ++EA++ +M +
Sbjct: 482 MIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD 541
Query: 180 ANPDEWSYNAILAY 193
+P + N Y
Sbjct: 542 CSPAQGCINGRATY 555
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
NI++A M + P + A +V + M+ + +V +
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I C+ V+ + +L ++I+ G P+ +++ ++ C ++ A+ L M
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
P+ H+Y++++K L RVG+ ++ E M+ G P V Y+ +V LCK + + E
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDR-LVNE 249
Query: 274 ACKYFEMMVDEGIPP----YSSTVEMLRN 298
A F M GI P Y+S + LRN
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRN 278
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+I+ + M N +P++ + + L + + + L +M G + D S
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ C V+ ++ ++ K + P+ T++ ++ G+ RA E+++ M R
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLV 301
G+ P+V +YS+++ GLC + GK E K E M G P Y++ V+ L ++RLV
Sbjct: 191 GYKPNVHSYSIIIKGLC-RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 150/300 (50%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYS--ILVRGLGDVG 58
MV +PS+ + + L ++ K+K A N F T YS +L+ L +
Sbjct: 87 MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLC-NQMDLFGVTHNVYSLNVLINCLCRLS 145
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A + +M + D + N+L+ +C G I EA G+ EM G EP+ SY+
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYN 205
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + RV M++ PNV TYN II LCK+ V EA + L EM++R
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR 265
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN IL C ++N A RL M NVMPD T+N+++ L + G A
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V E+M ++G P+ TY+ ++ G C +++EA K +M+ +G P S+ +L N
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHN-QMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
KP++ + ++ +LCK + V A +F P V TY+ ++ G +G+L+EA +
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF EM+ R D + N L++ +CK G + EA + M GAEP+A++Y+ + +C
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
N + +VL M PN+ +YN +I CK++++ EA +LL EM E+ PD
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+ ++ C AL L M ++PD Y+++L + G D A ++ + M
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM 472
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+R P++ Y++++ G+ GKLE A + F + +GI P T ++ L+ G
Sbjct: 473 HERRIKPNIILYTILIRGMF-IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 306 LD 307
D
Sbjct: 532 SD 533
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 170/337 (50%), Gaps = 7/337 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDV 57
M + GI+P + L++ LC +K A F+ + HE P V +Y+ ++ GL
Sbjct: 157 MFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE--PNVISYNTVINGLCKN 214
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G A ++F +M + + +++ +N++++++CK ++EA L EM G PD +Y
Sbjct: 215 GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTY 274
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H FC ++ R+ M N++P+ T+N ++ LCK V EA + + M E
Sbjct: 275 NTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTE 334
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+GA P+ ++YNA++ +C +++ A++++ M + P+ +YN+++ + R +
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + M ++ P TYS ++ GLC + G+ EA F+ M G+ P +L
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLC-QVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 298 NRLVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
+ G LD +++L + ER I +RG
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 155/332 (46%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI P + + +LH C + A + F + P T++ILV GL G
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR + + M E+ + +N+L++ C +DEA +L M G P+ SY+I
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C++ ++ R+L M NL P+ TY+ +++ LC+ + EA L EM G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLI-------------------------------- 207
PD +Y+ +L C ++ AL+L+
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501
Query: 208 ---TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++++ + + PD TYN+++K L++ G D A E + ME GF P +Y+V++ G
Sbjct: 502 ELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF 561
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + A + + MV + SST +ML
Sbjct: 562 LQNQDS-STAIQLIDEMVGKRFSADSSTFQML 592
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G +P+ Y + L+ C + A + P + +Y+IL+ G
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA++L EM E+ D + +++L++ +C+ G EA + +EM S G PD +YSI
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + ++L M + PN+ Y +IR + K+E A +L ++ G
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD W+YN ++ + A +M + +PD +YN++++ ++ A
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++ + M + F ST+ +++
Sbjct: 572 QLIDEMVGKRFSADSSTFQMLL 593
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ + L++ CK K + A + ++ TP TYS L++GL VG
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGR 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LF EM D++A++ LL+ CK G++DEA +L+EM +P+ Y+I
Sbjct: 427 PREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTI 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + + P+++TYN +I+ L K +EAY+ +M + G
Sbjct: 487 LIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
PD SYN I+ + + A++LI M + D T+ M+L L
Sbjct: 547 FLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 1/257 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F M+ ++ L ++ K A + +M G + +S ++
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + + V+ M + + P+ T+N +I LC K++EA L +EM+ G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN ++ C MA+R+ +M + P+ TYN ++ L + + A
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E M RG P V TY+ ++HG C G+L EA + F+ MV + P + T +L +
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFC-SLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 300 LVGLGFLDIIEILADKM 316
L G + +++ M
Sbjct: 316 LCKEGMVSEARCVSETM 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
+ID+A M + P + F+ + + S + + M + + NV++ N
Sbjct: 76 SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+ V+ A ++ +M + G PD ++N ++ C+ ++ A+ L M
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
P+ +YN V+ L + G A V+ ME+ P+V TY+ ++ LCK + + E
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR-LVNE 254
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
A ++ MVD GIPP T + + LG L+
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P+++ + LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R D++ +NS++ A+CKA +D+A +L M G PD +
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + P+V TY+ ++ LCKN + EA ++ D M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG P+ +Y +L + + + L+ M + + PD + +++++ G+ D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A V+ M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILC-KSGRVEDAMLYFEQMIDEGLSP 439
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + +LH C K A F + + P V TYS+L+ L G
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EARK+FD M +R +I + +LL+ G + E HG+L M G PD + +SI
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P YN+++ C + A LI M + + +N ++ + GR +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + G P+V TY+ +++G C GK++EA K MV G+ P + T L N
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYC-LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 300 LVGLGFLDIIEILADKMERS 319
+ ++ +L +ME S
Sbjct: 556 YCKISRMEDALVLFKEMESS 575
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L++ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 45 GRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLD 104
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164
Query: 121 IHAFCEAND-----------------------------IHSVFRVLDSMKRYN------- 144
+ C+ N I+ F+ DS K Y+
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 145 --LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
++P+V TYN II LCK + +++A ++L+ M++ G PD +YN+IL +C +
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V PD TY++++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 345 GY-ATKGALVEMHGLLDLMVRNGIHP 369
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 36/359 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P Y L+ A + V A F + + P TY ++ L G
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ + +NSL+ +C + A ++ EM G + ++
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ + M R + PNV TYN +I C K++EA +LL M+ G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK------------------------------- 268
E++ + + G +STY++++HGLCK K
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 269 ---GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
G+ +EA F G+ P T ++ ++G G L+ ++ L ME CT+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME-DNGCTV 719
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 15/232 (6%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC------EANDIH 131
D+ + L+ C+AG +D L + G DA +++ + C +A DI
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI- 144
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE---RGANPDEWSYN 188
VL M +PNVF+YN +++ LC + +EA +LL M + G+ PD SY
Sbjct: 145 ----VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ + + A M ++PD TYN ++ L + D+A EV +M K
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G P TY+ ++HG C G+ +EA + + M +G+ P T +L + L
Sbjct: 261 GVMPDCMTYNSILHGYC-SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP+ L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK D+A M + + + + +A +++I
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + LVPN +TY + + +EE QL M + G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
D N I+ R E+ A ++ + +++ + T ++ + LL
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK---ENVMPDRHTY 222
E+A + DE++ RG + N LA R A+ RM + + V PD TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALA-DVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF ++ ++ GLC K
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 136
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 3/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M EFG K D ++LL LCK +HV+ A++ FD K F P +K+Y+IL+ G G
Sbjct: 217 MEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHN 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +++ EM D++ + L+ A CKA D A + EM + +P Y
Sbjct: 277 LLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCT 336
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + K P TYN ++ C + ++++A+Q++DEM +
Sbjct: 337 LINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHS 396
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRA 238
A P+ +Y+ IL + N A +M+ E P TY +++++ R D A
Sbjct: 397 AGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLA 456
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW+ M+ +G P + YS ++ LC K KL EACKYF+ M+D GI P + L+
Sbjct: 457 KQVWDQMKAKGVLPGMHMYSDLITSLC-HKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQ 515
Query: 299 RLVGLGFLDIIEILADKMER 318
L+ G D LA K+ +
Sbjct: 516 ALLDEGKNDEALNLARKINK 535
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G +P++ + ++ C V +A Q +D K + P + YS L+ L +L
Sbjct: 430 EPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLG 489
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
EA K F EML+ ++L +A+ G DEA + R++ + P
Sbjct: 490 EACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKINKLRGTP 540
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 171/321 (53%), Gaps = 10/321 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G KP ++ +LCK++ A FFD+ KH+F P V Y+ LV G G++
Sbjct: 204 MEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDI 263
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A ++F +M E ++ ++ +++++C+ G I AH + EM G +P+A +++
Sbjct: 264 AKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSL 323
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR + +YN +I CK+E ++EA ++LD M+++G
Sbjct: 324 MRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGV 383
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N+I + +VN A R+ +M + MP+ TYN+++++ D +
Sbjct: 384 APNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLK 443
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-----GIPPYSSTVEM 295
+ + M++ P+V+TY +++ C +KG A + MV+E + Y + +E+
Sbjct: 444 LKKEMDESEVEPNVNTYRILILMFC-EKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLEL 502
Query: 296 LRNRLVGLGFLDIIEILADKM 316
LRN G L E L +KM
Sbjct: 503 LRNA----GQLKKHEELVEKM 519
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 2/253 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F + + Y+ ++ G + A L D M R + + + L+ +AG EA
Sbjct: 139 FPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAV 198
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
M G +PD S+SI I + C+ DS+K + P+V Y ++
Sbjct: 199 HAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLK-HKFEPDVIVYTSLVHGW 257
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+ + +A ++ +M E G P+ ++Y+ ++ C ++ A + + M P+
Sbjct: 258 CRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNA 317
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T+N ++++ V+ GR ++ +V+ M++ G +Y+ ++ CK + L+EA K +
Sbjct: 318 VTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDEN-LDEAVKVLD 376
Query: 280 MMVDEGIPPYSST 292
MV +G+ P +ST
Sbjct: 377 TMVKKGVAPNAST 389
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ ++D MK + V T++ ++R+ + EA + M + G PD+ S++ +++
Sbjct: 163 WHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISS 222
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + + A L K PD Y ++ R G +A EV+ M++ G P+
Sbjct: 223 LCKKRRASEA-ELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPN 281
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
V TYS+++ LC+ G++ A F M+D G P + T L V G + + +
Sbjct: 282 VYTYSIVIDSLCRC-GQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVY 340
Query: 314 DKMER 318
++M+R
Sbjct: 341 NQMKR 345
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 152/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGE 59
E G P ++ LL +LC + A +P V Y+ ++ G G+
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ +NS++ A+CKA +D+A LR+M + P+ ++Y+
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R++++P+V T + ++ LCK K++EA + D M +G
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SYN +L + + + L M + + PD +T+N+++K G D+A
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 417
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 465
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI P + + ++HALCK + + A F P TY+ L+ G G+
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM D++ + L+ ++CK G I EA + M G PD FSY+I
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 367
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + + + + D M + P+ +T+N +I+ +++A + +EM + G
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++A C +++ A+ +M + V PD++ YN +++ G +A
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 487
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ + G + + +S +++ LC K G++ +A F++ V+ G+ P + ML
Sbjct: 488 ELISEIMNNGMHLDIVFFSSIINNLC-KLGRVMDAQNIFDLTVNVGLHPDAVVYNML 543
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 156/356 (43%), Gaps = 52/356 (14%)
Query: 12 DLDQLLHALCK-------RKHVKVAHQFFDNAKHE------FTPTVKTYSILVRGLGDVG 58
DL+ L AL + R +A F+ A +PT TY+IL+
Sbjct: 69 DLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAH 128
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSY 117
A F ++L V+I+ N LLE C+A DEA +L +G PD FSY
Sbjct: 129 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 188
Query: 118 SIFIHAFCEA-------------------------------------NDIHSVFRVLDSM 140
SI + + C+ D++ + M
Sbjct: 189 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 248
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + P++ TYN ++ LCK +++A L +M+ + P+ W+YN ++ + +
Sbjct: 249 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 308
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+R+ M + +++PD T +M++ L + G+ A +V+++M +G P V +Y++M
Sbjct: 309 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 368
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++G KG L + F++M+ +GI P T +L G LD I+ ++M
Sbjct: 369 LNGY-ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + +L+ + + FD + P T+++L++ + G L +A
Sbjct: 357 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 416
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F+EM + D++ + +++ A+C+ G +D+A +M G PD ++Y+ I
Sbjct: 417 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 476
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ + + ++ ++ II LCK +V +A + D + G +PD
Sbjct: 477 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 536
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN ++ +C ++ ALR+ M + P+ Y ++ ++GR D ++
Sbjct: 537 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M +RG PS YS+++ GL + G+ A F M + GI
Sbjct: 597 EMLQRGIKPSTILYSIIIDGLF-EAGRTVPAKMKFHEMTESGI 638
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P Y + L+ A + A F+ + H P V TY ++ L +G+
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M+++ D A+N L++ C G++ +A ++ E+ + G D +S
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + D L P+ YN ++ C K+E+A ++ D M+ G
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ +C ++ L L M + + P Y++++ L GR A
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ M + G + TY++++ GL K +
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNR 656
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ I +++ LCK V A FD P Y++L+ G VG++ +A
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FD M+ +++ + +L+ CK G IDE + REM G +P YSI I
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
EA M + ++ TYN ++R L KN +EA L E+ +
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ N ++ V A L +++ ++P TY++++ L++ G + A +++
Sbjct: 677 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 736
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKK 267
SM+ G P+ + +V L KK
Sbjct: 737 SMQNAGCEPNSRLLNHVVRELLKK 760
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI+P++ L++ CK + F + + P+ YSI++ GL + G
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+ F EM E +DI +N +L + K DEA + +E+R++ + + + +
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + S+ R LVP+V TY+ +I L K VEEA + M G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
P+ N ++ + E+ A ++++ + N + T +++ L G
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 796
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P + L+ C ++ A + FD P V Y LV G +G +
Sbjct: 529 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 588
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML+R + ++ +++ + +AG A EM G D +Y+I
Sbjct: 589 DEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIV 648
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ N+ T N +I + + +VEEA L +
Sbjct: 649 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 708
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +Y+ ++ V A + + M P+ N V++ L++ RA
Sbjct: 709 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 768
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 769 YLSKIDERNFSLEHLTAMLLVD-LFSSKGTCREQIRFL 805
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 152/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGE 59
E G P ++ LL +LC + A +P V Y+ ++ G G+
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ +NS++ A+CKA +D+A LR+M + P+ ++Y+
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R++++P+V T + ++ LCK K++EA + D M +G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SYN +L + + + L M + + PD +T+N+++K G D+A
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 414
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 462
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 158/344 (45%), Gaps = 39/344 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI P + + ++HALCK + + A F P TY+ L+ G G+
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM D++ + L+ ++CK G I EA + M G PD FSY+I
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 120 FIHAFCE-------------------ANDIHSVFRVL-----------------DSMKRY 143
++ + A D ++ F VL + M+ +
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT-FNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V TY +I LC+ K+++A + ++MI++G PD+++YN ++ C + A
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 483
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
LI+ + + D ++ ++ L ++GR A +++ G +P YS+++ G
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 543
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 544 YC-LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 586
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 156/356 (43%), Gaps = 52/356 (14%)
Query: 12 DLDQLLHALCK-------RKHVKVAHQFFDNAKHE------FTPTVKTYSILVRGLGDVG 58
DL+ L AL + R +A F+ A +PT TY+IL+
Sbjct: 66 DLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAH 125
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSY 117
A F ++L V+I+ N LLE C+A DEA +L +G PD FSY
Sbjct: 126 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185
Query: 118 SIFIHAFCEA-------------------------------------NDIHSVFRVLDSM 140
SI + + C+ D++ + M
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 245
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + P++ TYN ++ LCK +++A L +M+ + P+ W+YN ++ + +
Sbjct: 246 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 305
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+R+ M + +++PD T +M++ L + G+ A +V+++M +G P V +Y++M
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 365
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++G KG L + F++M+ +GI P T +L G LD I+ ++M
Sbjct: 366 LNGY-ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + +L+ + + FD + P T+++L++ + G L +A
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 413
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F+EM + D++ + +++ A+C+ G +D+A +M G PD ++Y+ I
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 473
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ + + ++ ++ II LCK +V +A + D + G +PD
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 533
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y+ ++ +C ++ ALR+ M + P+ Y ++ ++GR D ++
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 593
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
M +RG PS YS+++ GL + + K+ EM
Sbjct: 594 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM 630
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 126/334 (37%), Gaps = 71/334 (21%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L L+ +LCK +K A FD A P V +Y+I++ G G L +
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LFD ML D N L++A G +D+A + EMR G +PD +Y I A
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNC------------------------------ 154
C + + M + P+ + YNC
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 155 -----IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
II LCK +V +A + D + G +PD Y+ ++ +C ++ ALR+
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS---------------- 253
M + P+ Y ++ ++GR D ++ M +RG PS
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 254 -------------------VSTYSVMVHGLCKKK 268
+ TY++++ GL K +
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNR 653
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI+P++ L++ CK + F + + P+ YSI++ GL G
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+ F EM E +DI +N +L + K DEA + +E+R++ + + + +
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + S+ R LVP+V TY+ +I L K VEEA + M G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
P+ N ++ + E+ A ++++ + N + T +++ L G
Sbjct: 740 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P L+ C ++ A + FD P V Y LV G +G +
Sbjct: 526 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 585
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML+R + ++ +++ + +AG A EM G D +Y+I
Sbjct: 586 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIV 645
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ N+ T N +I + + +VEEA L +
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 705
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +Y+ ++ V A + + M P+ N V++ L++ RA
Sbjct: 706 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 765
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVD-LFSSKGTCREHIRFL 802
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA--HQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
M E G+ P++ L+ L+ ALC+ A F + K P TY L+ GL G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA+KLF EM+E+ C ++ + SL+ +C + N+DEA L EM+S G EP+ F+YS
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + + M PN+ TY +I LCK +K++EA +LLD M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--- 235
G PD Y +++ C ++ A + M + P+R T+N+ +K V R
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA 386
Query: 236 ---DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
RA ++ SM RG V T +V LC KKG+ ++A + + +V +G P T
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLC-KKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 293 VEML 296
++L
Sbjct: 446 WKLL 449
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 136/300 (45%), Gaps = 19/300 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV----KTYSILVRGLGDVGELS 61
I PS Q++ + K V+ + FD+A E+ ++ +V L +
Sbjct: 14 ITPS-----QVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKA-GNIDEAHGMLR---EMRSIGAEPDAFSY 117
A L M C V +L ++C+ G + LR +M+ +P +Y
Sbjct: 69 AAEDLIVRMKIENCVV----SEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAY 124
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE-KVEEAYQLLDEMI 176
+ E N ++ F+ +M+ L P V + N +I+ LC+N+ V+ ++ EM
Sbjct: 125 VTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG +PD ++Y +++ C ++ A +L T M +++ P TY ++ L D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A E M+ +G P+V TYS ++ GLC K G+ +A + FEMM+ G P T L
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLC-KDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 42/251 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE P++ L++ LC K+V A ++ + K + P V TYS L+ GL G
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF+ M+ R C +++ + +L+ +CK I EA +L M G +PDA Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN-------------------------- 153
I FC + LD M + PN T+N
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL 397
Query: 154 ---------------CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+++ LCK + ++A QL+DE++ G P + ++ ++ + D+
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457
Query: 199 EVNMALRLITR 209
V A + R
Sbjct: 458 IVGEASDTLLR 468
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
RV MK ++ P+ Y ++ L + ++ A++ M E G P S N ++
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 194 HC-DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + V+ L++ M K PD +TY ++ L R GR D A +++ M ++ P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRNRLVGLGFLDI 308
+V TY+ +++GLC K ++EA +Y E M +GI P YSS ++ L L +++
Sbjct: 226 TVVTYTSLINGLCGSK-NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 309 IEILADKMERSTSCTIQELANAM 331
E++ + R T L +
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGL 307
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
+LR+ +M + P + Y VL +LV + + A + +++M + G P+V++ +V++
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTS 321
LC+ G ++ K F M G P S T L + L G +D + L +M E+ +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 322 CTIQELANAMRGKTG 336
T+ + + G G
Sbjct: 225 PTVVTYTSLINGLCG 239
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 175/342 (51%), Gaps = 5/342 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+P++ + ++ LCK K V A+ + +A+ F P TY+ L+ G +G+L A
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PDAITYTTLIYGFCLLGQLMGAF 205
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM+ + + +N L+ A+CK GN+ EA +L M G +P +YS + +
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ + ++ +M + + PNV++YN +I LCK ++V+EA LL EM+ + PD
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+++ C + AL L+ M D TY +L L + D+AT ++
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M++RG P++ TY+ ++ GLC K G+L+ A + F+ ++ +G T ++ + L G
Sbjct: 386 MKERGIQPTMYTYTALIDGLC-KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEG 444
Query: 305 FLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
D + KME C + + ++ F K +++ E
Sbjct: 445 MFDEALAIKSKME-DNGCIPNAVTFEIIIRSLFEKDENDKAE 485
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 150/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ L+ LC + VK + F D + F +Y L+ GL +GE
Sbjct: 71 ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGE 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL + +R +++ +N++++ +CK ++EA+ + EM + G PDA +Y+
Sbjct: 131 TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTT 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + F +LD M N+ P V+ YN +I LCK V+EA LL M + G
Sbjct: 191 LIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y+ ++ +C EV A ++ M + V P+ ++YN+++ L + R D A
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+ M + P TY+ ++ GLC K G++ A M G P Y+S ++
Sbjct: 311 NLLREMLHKNMVPDTVTYNSLIDGLC-KSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369
Query: 296 L 296
L
Sbjct: 370 L 370
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GIKP + L+ C V+ A Q F + P V +Y+I++ GL
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L EML + D + +NSL++ +CK+G I A ++ EM G D +Y+
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ ++ + MK + P ++TY +I LCK +++ A +L ++ +G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D W+Y +++ C + AL + ++M +P+ T+ ++++ L D+A
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485
Query: 240 EVWESMEKRGF 250
++ M +G
Sbjct: 486 KLLHEMIAKGL 496
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I + +++L +L K K A + + T +IL+ +G+++ + +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D + N+L++ +C G + ++ ++ + G + D SY ++ C+
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++L ++ + PNV YN II LCK++ V EAY L EM RG PD +
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C ++ A L+ M +N+ P + YN+++ L + G A + M
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
K G P V TYS ++ G C G+++ A + F MV G+ P + ++ N L
Sbjct: 248 KEGIKPGVVTYSTLMDGYC-LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++Y + +++ LCK K V A H+ P TY+ L+ GL G
Sbjct: 281 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A L +EM R P D++ + SLL+A+CK N+D+A + +M+ G +P ++Y+
Sbjct: 341 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + + + +V+TY +I LCK +EA + +M + G
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+ ++ I+ ++ E + A +L+ M + ++
Sbjct: 461 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + ++ ++ L + + A L +M + + + N L+ C G + +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L ++ +G +PD + + + C ++ D + + +Y ++ LC
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + A +LL + +R P+ YN I+ C VN A L + M + PD
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY ++ +G+ A + + M + P V Y+++++ LC K+G ++EA +
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALC-KEGNVKEAKNLLAV 245
Query: 281 MVDEGIPPYSSTVEML 296
M EGI P T L
Sbjct: 246 MTKEGIKPGVVTYSTL 261
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 165/320 (51%), Gaps = 3/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M +FG+K D ++LL L K + V A FD K F P +K+Y+IL+ G G
Sbjct: 207 MEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKN 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + +++ EM + D++ + L+ A CK D+A + REM S +P +
Sbjct: 267 LLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + K P TYN ++ C + ++++AY+++DEM + G
Sbjct: 327 LINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y+ IL + + A + +M ++E P TY++++++ + + + A
Sbjct: 387 VGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESA 446
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+VW+ M+ +G +P + +S++++ LC + KL+ ACKYF+ M+D GI P ++ L+
Sbjct: 447 IKVWDRMKAKGVHPGMHMFSILINSLC-HENKLDIACKYFQEMLDVGIRPPAALFSHLKQ 505
Query: 299 RLVGLGFLDIIEILADKMER 318
L+ G D + +LA K+++
Sbjct: 506 ALIEDGRKDTVVLLAQKIDK 525
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 125/276 (45%), Gaps = 4/276 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+A FF A+ + F ++Y+ L+ LG + + + L ++M +RK + +
Sbjct: 129 LALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDM-KRKGVLTKETFALI 187
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
++G + EA +M G + ++ ++ + ++ + S V D MK
Sbjct: 188 SRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRF 247
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP++ +Y ++ + + + + ++ EM + G PD +Y ++ +C + + A+
Sbjct: 248 VPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIE 307
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L M +N P H + ++ L V R A E + + GF P TY+ +V C
Sbjct: 308 LFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYC 367
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
++++A + + M G+ P S T +++ + L+
Sbjct: 368 WSM-RIDDAYRMVDEMRKSGVGPNSRTYDIILHHLI 402
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M + G+ P+ D +LH L K + A F+ +++ E PTV TY I+VR ++
Sbjct: 382 MRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMD 441
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A K++D M + + + L+ ++C +D A +EM +G P A +S
Sbjct: 442 KVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFS 501
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
A E +V + + + P V
Sbjct: 502 HLKQALIEDGRKDTVVLLAQKIDKLRKTPYV 532
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 152/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGE 59
E G P ++ LL +LC + A +P V Y+ ++ G G+
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ +NS++ A+CKA +D+A LR+M + P+ ++Y+
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R++++P+V T + ++ LCK K++EA + D M +G
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SYN +L + + + L M + + PD +T+N+++K G D+A
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 427
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 475
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 37/343 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI P + + ++HALCK + + A F P TY+ L+ G G+
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM D++ + L+ ++CK G I EA + M G PD FSY+I
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377
Query: 120 -----------------------------------FIHAFCEANDIHSVFRVLDSMKRYN 144
I A+ + + + M+ +
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+V TY +I LC+ K+++A + ++MI++G PD+++YN ++ C + A
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LI+ + + D ++ ++ L ++GR A +++ G +P YS+++ G
Sbjct: 498 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 558 C-LVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 599
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 156/356 (43%), Gaps = 52/356 (14%)
Query: 12 DLDQLLHALCK-------RKHVKVAHQFFDNAKHE------FTPTVKTYSILVRGLGDVG 58
DL+ L AL + R +A F+ A +PT TY+IL+
Sbjct: 79 DLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAH 138
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSY 117
A F ++L V+I+ N LLE C+A DEA +L +G PD FSY
Sbjct: 139 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 198
Query: 118 SIFIHAFCEA-------------------------------------NDIHSVFRVLDSM 140
SI + + C+ D++ + M
Sbjct: 199 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 258
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + P++ TYN ++ LCK +++A L +M+ + P+ W+YN ++ + +
Sbjct: 259 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 318
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+R+ M + +++PD T +M++ L + G+ A +V+++M +G P V +Y++M
Sbjct: 319 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 378
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++G KG L + F++M+ +GI P T +L G LD I+ ++M
Sbjct: 379 LNGY-ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 133/283 (46%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + +L+ + + FD + P T+++L++ + G L +A
Sbjct: 367 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 426
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F+EM + D++ + +++ A+C+ G +D+A +M G PD ++Y+ I
Sbjct: 427 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 486
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ + + ++ ++ II LCK +V +A + D + G +PD
Sbjct: 487 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 546
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y+ ++ +C ++ ALR+ M + P+ Y ++ ++GR D ++
Sbjct: 547 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 606
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M +RG PS YS+++ GL + G+ A F M + GI
Sbjct: 607 EMLQRGIKPSTILYSIIIDGLF-QAGRTVPAKMKFHEMTESGI 648
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 126/334 (37%), Gaps = 71/334 (21%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L L+ +LCK +K A FD A P V +Y+I++ G G L +
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 392
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LFD ML D N L++A G +D+A + EMR G +PD +Y I A
Sbjct: 393 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNC------------------------------ 154
C + + M + P+ + YNC
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512
Query: 155 -----IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
II LCK +V +A + D + G +PD Y+ ++ +C ++ ALR+
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS---------------- 253
M + P+ Y ++ ++GR D ++ M +RG PS
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 254 -------------------VSTYSVMVHGLCKKK 268
+ TY++++ GL K +
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 666
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 1/264 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ I +++ LCK V A FD P YS+L+ G VG++ +A
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FD M+ +++ + +L+ CK G IDE + REM G +P YSI I
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A M + ++ TYN ++R L KN +EA L E+ +
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ N ++ V A L +++ ++P+ TY++++ L++ G + A +++
Sbjct: 687 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFS 746
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKK 267
SM+ G P+ + +V L KK
Sbjct: 747 SMQNAGCEPNSRLLNHVVRELLKK 770
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI+P++ L++ CK + F + + P+ YSI++ GL G
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+ F EM E +DI +N +L + K DEA + +E+R++ + + + +
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + S+ R LVPNV TY+ +I L K VEEA + M G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
P+ N ++ + E+ A ++++ + N + T +++ L G
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 806
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P L+ C ++ A + FD P V Y LV G +G +
Sbjct: 539 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 598
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML+R + ++ +++ + +AG A EM G D +Y+I
Sbjct: 599 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIV 658
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ N+ T N +I + + +VEEA L +
Sbjct: 659 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 718
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +Y+ ++ V A + + M P+ N V++ L++ RA
Sbjct: 719 VPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 778
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 779 YLSKIDERNFSLEHLTAMLLVD-LFSSKGTCREQIRFL 815
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 162/303 (53%), Gaps = 3/303 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
MV GI ++ + L+H C + A + + K + P V T++ILV L +G
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++EAR +F M++R D+++ N+L+ C G + EA + M G P+ SYS
Sbjct: 282 MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYS 341
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ +C+ + R+L M + NLVP+ TYNC++ L K+ +V + L++ M
Sbjct: 342 TLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +L + R ++ AL L + + P+ TYN+++ L + GR A
Sbjct: 402 GQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAA 461
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+++ + +G P++ TY++M++GL +++G L+EA MVD+G PP + T + L
Sbjct: 462 KEIFQLLSVKGCRPNIRTYNIMINGL-RREGLLDEAEALLLEMVDDGFPPNAVTFDPLVR 520
Query: 299 RLV 301
L+
Sbjct: 521 ALL 523
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 4/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M+ PSI L++LL ++ K KH ++K P++ T SI + L +G
Sbjct: 46 MLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLG 105
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A + ++++R VD +L++ +C G EA + S G D Y
Sbjct: 106 QMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYG 165
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ +L M++ + PN+ YN ++ LCK V EA L EM+ +
Sbjct: 166 TLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGK 225
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMT-KENVMPDRHTYNMVLKLLVRVGRFDR 237
G D ++YN+++ C + A+RL+ M KE+V PD +T+N+++ L ++G
Sbjct: 226 GICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAE 285
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A V+ M KRG P V + + +++G C +G + EA + F+ MV+ G P + L
Sbjct: 286 ARNVFGLMIKRGLEPDVVSCNALMNGWC-LRGCMSEAKEVFDRMVERGKLPNVISYSTLI 344
Query: 298 N 298
N
Sbjct: 345 N 345
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 132/263 (50%), Gaps = 1/263 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P +Y + L+ ALCK V A F K P V + + L+ G G +SEA+
Sbjct: 263 VRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAK 322
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++FD M+ER +++++++L+ CK +DEA +L EM PD +Y+ +
Sbjct: 323 EVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGL 382
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
++ + + ++++M+ P++ TYN ++ K E +++A L +++ G +P+
Sbjct: 383 SKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNI 442
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ C + A + ++ + P+ TYN+++ L R G D A +
Sbjct: 443 RTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLE 502
Query: 245 MEKRGFYPSVSTYSVMVHGLCKK 267
M GF P+ T+ +V L +K
Sbjct: 503 MVDDGFPPNAVTFDPLVRALLEK 525
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 152/285 (53%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+++ + +++ LCK+ ++V+ F + +P TY+ L+ EA
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +F +ML R D+++ +SL+ + G++D+A R+M++ G PD Y+I I+
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + + D M +V YN I+ LCK + + +A L DEM+ERG PD
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ ++ HC + AL L MT++N+ PD TYN+++ + ++A E+W
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M R +P+ +Y+++V+G C G + EA + ++ M+ +GI P
Sbjct: 490 EMISRKIFPNHISYAILVNGYC-NLGFVSEAFRLWDEMIRKGIKP 533
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L+ + H+ A +F + K P Y+IL+ G G
Sbjct: 316 MLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGM 375
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA ++ D+MLE+ C +D++A+N++L +CK + +A+ + EM G PD +++
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE------------- 166
IH C+ ++ + M + N+ P++ TYN +I CK ++E
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 167 ----------------------EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
EA++L DEMI +G P + N ++ +C +++ A
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ +M E V PD TYN ++ V+ D+A + ME +G P V TY+V+++G
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGF 615
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
C ++G+++EA M++ GI P ST L N V
Sbjct: 616 C-RQGRMQEAELILRKMIERGIDPDRSTYTTLINGYV 651
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G + + +L+ LCK+K + A+ FD + P T++ L+ G G
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF M ++ DI+ +N L++ CK +++A+ + EM S P+ SY+I
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +C + FR+ D M R + P + T N +I+ C++ + +A + L +MI G
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ ++ A LI +M + + PD TYN++L R GR A
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAE 625
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M +RG P STY+ +++G + L+EA ++ + M+ G P
Sbjct: 626 LILRKMIERGIDPDRSTYTTLINGYVSQD-NLKEAFRFHDEMLQRGFVP 673
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G SI + LL L K V +A + ++ A+ V T +I+V L ++ +
Sbjct: 145 GFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDV 204
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +M ++ DI+ +N+L+ A C+ G + EA ++ M G +P F+Y+ I+
Sbjct: 205 KPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVING 264
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ V + M L P+ TYN ++ + C+N EA + +M+ RG +PD
Sbjct: 265 LCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
S+++++ ++ AL M ++PD Y +++ R G A E+ +
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRD 384
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++G V Y+ +++GLCKKK L +A F+ MV+ G+ P
Sbjct: 385 KMLEQGCALDVVAYNTILNGLCKKK-LLADANALFDEMVERGVVP 428
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 120/219 (54%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + IKP I + L+ CK ++ A++ ++ + P +Y+ILV G ++G
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGF 515
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +L+DEM+ + ++ N++++ C++G++ +A L +M S G PD+ +Y+
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + + F +++ M+ L P+V TYN I+ C+ +++EA +L +MIERG
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+PD +Y ++ + + + A R M + +PD
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ ++Y L+ +++ALCK + F D + + TY+ L+ G L EA
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ + M + + +N+++ +CK G A G+ EM SIG PD +Y+ +
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C N+ + M + P++ +++ +I +N +++A +M G PD
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ +C ++ AL + +M ++ D YN +L L + A +++
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +RG P T++ ++HG C K+G + +A F +M + I P T +L
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHC-KEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ +L+R +L+E F + + V I A NSLL + K G +D A + E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G E + ++ +I ++A C+ + I V L M++ + ++ TYN +I C+ +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA+++++ M +G P ++YNA++ C + A + M + PD TYN +
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L R F A +++ M RG P + ++S ++ G+ + G L++A YF M G
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI-GVSSRNGHLDQALMYFRDMKTSG 355
Query: 286 IPPYSSTVEMLRN 298
+ P + +L N
Sbjct: 356 LVPDNVIYTILIN 368
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D + + I ++ +A ++ ++R + ++ N ++ L K V+ A+++
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+E+ G + ++ N ++ C +++ + M ++ + D TYN ++ R
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G A EV SM +G P++ TY+ +++GLC KKG+ A F M+ G+ P ++T
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLC-KKGRYVRAKGVFNEMLSIGLSPDTTT 292
Query: 293 -----VEMLRNRLVGLGFLDIIEILADKMERSTS 321
VE RN FL+ +I +D + R S
Sbjct: 293 YNTLLVESCRNN----NFLEAKDIFSDMLHRGVS 322
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 4/321 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVG 58
M ++G+KP I D ++L+ LCK K HV+ A + FD + P +K+Y+IL+ G
Sbjct: 180 MEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQ 239
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L + ++ EM + D++ + ++ A CKA DEA G+ +M S P Y
Sbjct: 240 NLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYC 299
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
FI + + F + K P TYN ++ C + ++++AY+++ EM E
Sbjct: 300 TFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKEL 359
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLKLLVRVGRFDR 237
G P+ +Y+ IL + A + RM+ E P TY +++++ + D
Sbjct: 360 GIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDM 419
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A VW M+ +G P + +S ++ LC + KL++AC+YF+ M+D GI P ++ +
Sbjct: 420 AMVVWNEMKDKGILPGIHMFSTLIISLCHE-NKLDDACRYFQQMLDVGIRPTANMFSAFK 478
Query: 298 NRLVGLGFLDIIEILADKMER 318
L+ G + + A K+++
Sbjct: 479 RALMAAGMENTVIHFAKKVDK 499
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CKR ++ A +FF + + TP V TY+ ++ G +G+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EML R DI+ L+ CKAG+I +A + M G P+ +Y+
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ D+ S +L M + L PN+FTYN I+ LCK+ +EEA +L+ E G
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D +Y ++ +C E++ A ++T M + + P T+N+++ G +
Sbjct: 945 LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1004
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M +G P+ +T++ +V C + L+ A ++ M G+ P T E L
Sbjct: 1005 KLLNWMLAKGIAPNATTFNCLVKQYCIRN-NLKAATAIYKDMCSRGVEPDGKTYENL 1060
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP+ Y ++ LC+ K + F + P Y+ LV G G+
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K F EM R D+L + +++ C+ G++ EA + EM G EPD +++
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +C+A I FRV + M + PNV TY +I LCK ++ A +LL EM + G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN+I+ C + A++L+ + D TY ++ + G D+A
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ M +G P++ T++V+++G C G LE+ K M+ +GI P ++T L
Sbjct: 970 EILTEMLGKGLQPTIVTFNVLMNGFC-LHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 150/283 (53%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P I +L++ CK H+K A + ++ + +P V TY+ L+ GL G+L A
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + +I +NS++ +CK+GNI+EA ++ E + G D +Y+ + A
Sbjct: 899 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 958
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ ++ +L M L P + T+N ++ C + +E+ +LL+ M+ +G P+
Sbjct: 959 YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ +C R + A + M V PD TY ++K A +++
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M+ +GF SVSTYSV++ G K+K K EA + F+ M +G+
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRK-KFVEAREIFDQMRRDGL 1120
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 3/333 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G+ ++ + ++H +C+ + AH + + +TP V +YS ++ G GEL
Sbjct: 662 EVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELD 721
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ KL ++M ++ + + S++ +C+ + EA EM G PD Y+ +
Sbjct: 722 KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLV 781
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ DI + + M ++ P+V TY II C+ + EA +L EM+ RG
Sbjct: 782 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE 841
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++ ++ +C + A R+ M + P+ TY ++ L + G D A E+
Sbjct: 842 PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 901
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K G P++ TY+ +V+GLC K G +EEA K G+ + T L +
Sbjct: 902 LHEMWKIGLQPNIFTYNSIVNGLC-KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Query: 302 GLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
G +D EIL + + + TI M G
Sbjct: 961 KSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 153/335 (45%), Gaps = 43/335 (12%)
Query: 15 QLLHALCKRKHVKVAH---QFFD---NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFD 68
L+ + +R + V QFFD ++ + + + + L + G L EARK+F+
Sbjct: 563 SLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFE 622
Query: 69 EMLE-------------------------------RKCP-----VDILAHNSLLEAMCKA 92
+ML R+ P ++ ++N ++ +C+
Sbjct: 623 KMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL 682
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G I+EAH +L M G PD SYS I+ +C ++ V+++++ MK+ L PN +TY
Sbjct: 683 GRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTY 742
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
II LC+ K+ EA + EMI +G PD Y ++ C R ++ A + M
Sbjct: 743 GSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHS 802
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++ PD TY ++ ++G A +++ M RG P + T++ +++G C K G ++
Sbjct: 803 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC-KAGHIK 861
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+A + M+ G P T L + L G LD
Sbjct: 862 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ L+ LCK + A++ + K P + TY+ +V GL G
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL E D + + +L++A CK+G +D+A +L EM G +P ++++
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC------------------- 160
++ FC + ++L+ M + PN T+NC++++ C
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049
Query: 161 ----------------KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++EA+ L EM +G + +Y+ ++ R + A
Sbjct: 1050 VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109
Query: 205 RLITRMTKENVMPDRHTYNM 224
+ +M ++ + D+ ++
Sbjct: 1110 EIFDQMRRDGLAADKEIFDF 1129
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P+I + L++ C ++ + + P T++ LV+
Sbjct: 975 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ +M R D + +L++ C A N+ EA + +EM+ G +YS+
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I F + + D M+R L + ++ K ++ + +DE+IE
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 152/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDVGE 59
E G P ++ + LL +LC + A T P V Y+ ++ G G+
Sbjct: 141 ELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ +NS++ A+CKA +D+A LR+M + P+ ++Y+
Sbjct: 201 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R++++P+V T + ++ LCK K++EA + D M +G
Sbjct: 261 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SYN +L + + + L M + + PD +T+N+ +K G D+A
Sbjct: 321 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAM 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 381 IIFNEMRDHGVKPDVVTYRTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 428
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 39/315 (12%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+PT TY+IL+ A F ++L VD + + LL+ C+A DEA
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132
Query: 100 G-MLREMRSIGAEPDAFSYSIFIHAFC--------------------------------- 125
+L +G PD FSY+I + + C
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192
Query: 126 ----EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ D++ + M + + P++ TYN ++ LCK +++A L +M+ +
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ W+YN ++ + + A+R+ M + +++PD T +M++ L + G+ A +V
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+++M +G P V +Y++M++G KG L + F++M+ +GI P T +
Sbjct: 313 FDTMAMKGQNPDVFSYNIMLNGY-ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYA 371
Query: 302 GLGFLDIIEILADKM 316
G LD I+ ++M
Sbjct: 372 NCGMLDKAMIIFNEM 386
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI P + + ++HALCK + + A F P TY+ L+ G G+
Sbjct: 211 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM D++ + L+ ++CK G I EA + M G PD FSY+I
Sbjct: 271 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + + + + D M + P+ +T+N I+ +++A + +EM + G
Sbjct: 331 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHG 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
PD +Y ++A C +++ A+ +M + V PD++ YN +++
Sbjct: 391 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 438
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P Y + + A + A F+ + H P V TY ++ L +G+
Sbjct: 351 MLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 410
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+ +A + F++M+++ D A+N L++ C G + + G+
Sbjct: 411 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGI 452
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 157/295 (53%), Gaps = 5/295 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G++P++ + ++ LCKR +K A + + + P V T++ L+ GL G
Sbjct: 266 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGW 325
Query: 60 LSEARKLFDEML--ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+A +LF +++ E P ++L + +++ C+ ++ A +L M+ G P+ +Y
Sbjct: 326 TEKAFRLFLKLVRSENHKP-NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTY 384
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I C+A + + +++ M PN+ TYN I+ LCK +V+EAY++L++ +
Sbjct: 385 TTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQ 444
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD+++YN +++ HC + + AL L +M K + PD H+Y ++ + R R
Sbjct: 445 NGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKE 504
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ +E + G P+ TY+ M+ G C ++G L A K+F + D G P S T
Sbjct: 505 SEMFFEEAVRIGIIPTNKTYTSMICGYC-REGNLTLAMKFFHRLSDHGCAPDSIT 558
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 5/295 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+ ++ + V+ A F+ P +Y ++V +G + EA
Sbjct: 165 GLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEA 224
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K MLER VD ++ G A R + +G EP+ +++ I
Sbjct: 225 DKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEG 284
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN-- 181
C+ I F +L+ M PNV+T+ +I LCK E+A++L +++ R N
Sbjct: 285 LCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLV-RSENHK 343
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y A+++ +C ++N A L++RM ++ ++P+ +TY ++ + G F+RA ++
Sbjct: 344 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 403
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M GF P++ TY+ +V+GLC K+G+++EA K E G+ P T +L
Sbjct: 404 MNLMSSEGFSPNLCTYNAIVNGLC-KRGRVQEAYKMLEDGFQNGLKPDKFTYNIL 457
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP++ ++ C+ + A K + P TY+ L+ G G A
Sbjct: 343 KPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYD 402
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M ++ +N+++ +CK G + EA+ ML + G +PD F+Y+I + C
Sbjct: 403 LMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHC 462
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ +I + + M + + P++ +Y +I C+ +++E+ +E + G P
Sbjct: 463 KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNK 522
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +++ +C + +A++ R++ PD TY ++ L + + D A +++SM
Sbjct: 523 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582
Query: 246 EKRGFYPSVSTYSVMVHGLCK 266
++G P T + + CK
Sbjct: 583 IEKGLVPCEVTRITLAYEYCK 603
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++E+ + G + EA M+ EM + G P+ + + I E + + + M
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+ +Y ++ CK + EA + L M+ERG D ++ I++ + AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ + P+ + +++ L + G +A E+ E M +G+ P+V T++ ++ GL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
Query: 265 CKKKGKLEEACKYFEMMV 282
C KKG E+A + F +V
Sbjct: 321 C-KKGWTEKAFRLFLKLV 337
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++ + +++EA +++ EM +G P+ + N I+ + V A L M
Sbjct: 140 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 199
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V PD +Y +++ + ++G A + M +RGF +T+++++ KG
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRF-SGKGYTTR 258
Query: 274 ACKYFEMMVDEGIPP 288
A YF +VD G+ P
Sbjct: 259 ALWYFRRLVDMGLEP 273
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 163/307 (53%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ +GI P + + L++ K+ V +A + + +++ P V +Y+ILV G +G+
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L +EM + + N L+ A CK I EA + REM G +PD ++++
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I CE ++I +L M +V N TYN +I + +++EA +L++EM+ +G
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ DE +YN+++ C EV+ A L +M ++ ++P + N+++ L R G + A
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E + M RG P + T++ +++GLC+ G++E+ F + EGIPP + T L +
Sbjct: 614 EFQKEMVLRGSTPDIVTFNSLINGLCRA-GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672
Query: 300 LVGLGFL 306
L GF+
Sbjct: 673 LCKGGFV 679
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 154/307 (50%), Gaps = 17/307 (5%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---------HEFTPTVKTYSILVRGLGDV 57
KP+ + L+H V H D+AK + P V TY+ L+ G
Sbjct: 344 KPTSVIFNTLIHGF-------VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKK 396
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + A ++ +M + C ++ ++ L++ CK G IDEA+ +L EM + G +P+ +
Sbjct: 397 GLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGF 456
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I AFC+ + I + M R P+V+T+N +I LC+ ++++ A LL +MI
Sbjct: 457 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 516
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN ++ R E+ A +L+ M + + D TYN ++K L R G D+
Sbjct: 517 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDK 576
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++E M + G PS + +++++GLC + G +EEA ++ + MV G P T L
Sbjct: 577 ARSLFEKMLRDGLVPSSISCNILINGLC-RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635
Query: 298 NRLVGLG 304
N L G
Sbjct: 636 NGLCRAG 642
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 1/265 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ + L+ A CK + A + F + + P V T++ L+ GL +V E+ A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M+ + + +N+L+ A + G I EA ++ EM G+ D +Y+ I
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A ++ + + M R LVP+ + N +I LC++ VEEA + EM+ RG+ PD
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ C + L + ++ E + PD TYN ++ L + G A + +
Sbjct: 628 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLD 687
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK 268
+ GF P+ T+S+++ L ++
Sbjct: 688 EGIEDGFVPNDRTWSILLQSLVPQE 712
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 33/279 (11%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT K+Y++++ L A +F +ML RK P + +++A+C +D A +
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR+M G P++ Y IH+ + N ++ ++L+ M VP+ T+N +I LCK
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-------- 213
+++ EA ++++ M+ RG PD+ +Y ++ C V+ A L R+ K
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTL 353
Query: 214 ------------------------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++PD TYN ++ + G A EV M +G
Sbjct: 354 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG 413
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V +Y+++V G C K GK++EA M +G+ P
Sbjct: 414 CKPNVYSYTILVDGFC-KLGKIDEAYNLLNEMSADGLKP 451
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP +Y + L+ LC+ +K A D TY+ L+ GE+ EA
Sbjct: 483 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 542
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RKL +EM+ + +D + +NSL++ +C+AG +D+A + +M G P + S +I I+
Sbjct: 543 RKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILING 602
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + M P++ T+N +I LC+ ++E+ + ++ G PD
Sbjct: 603 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 662
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++++ C V A L+ ++ +P+ T++++L+ LV E
Sbjct: 663 TVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVP----------QE 712
Query: 244 SMEKRGFYPSV 254
++++R FY +V
Sbjct: 713 TLDRRTFYNAV 723
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C ++N +LE + A + +M S P F++ + + A C N++ S
Sbjct: 172 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSAL 231
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL M ++ VPN Y +I L K +V EA QLL+EM G PD ++N ++
Sbjct: 232 SVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 291
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +N A +++ RM PD TY ++ L ++GR D A +++ + K P+
Sbjct: 292 CKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTS 347
Query: 255 STYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEML-----RNRLVGLGFLDI 308
++ ++HG G+L++A +M+ GI P T L + LVGL
Sbjct: 348 VIFNTLIHGFV-THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA---- 402
Query: 309 IEILAD 314
+E+L D
Sbjct: 403 LEVLRD 408
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 172/363 (47%), Gaps = 50/363 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G +P + + L+ C+ + + VA FD F+ +Y+ L+ G + G
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF E+ + D+ H +L++ +C A +E ML++M+ +G P +Y+
Sbjct: 215 VDEALELFRELEQP----DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270
Query: 120 FI-----------------------------------HAFCEANDIHSVFRVLDSMKRYN 144
+ +A+C + RV +SMK
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV+TYN +++ C KV +A LLD+M E G PD +YN ++ C + A
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + D++TYN+++ L + G+ D A +++ +E RG P+ T++ +++GL
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML---RNRLVGLGFLDIIEILADKME 317
C K GK + AC + E MV G P YS +E L + GL F+D E+L ++
Sbjct: 451 C-KGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFID--EMLQKDVK 507
Query: 318 RST 320
ST
Sbjct: 508 PST 510
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M + G+ P +++A C+ + A + F++ K + P V TY+ +V+G +VG+
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L D+M E D++ +N L+ C G+I+ A +LR M G D ++Y++
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNV 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + D ++ + PN T+N +I LCK K + A L++M+ G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+ + C L I M +++V P Y +V+ L + + AT
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLAT 530
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+W M G P V TY+ V C +G+L EA
Sbjct: 531 RIWGQMVSLGCSPDVVTYTTSVRAYC-NEGRLHEA 564
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT TY+ L+R L +L A++ M+ D NSL+ C+ +D A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+M G DA SY+ I FCE + + +++ P+++T+ +++ LC
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ EE +L +M E G P +Y A++ C + A +++ M ++P T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
V+ R GR A V+ESM+ +G P+V TY+ MV G C GK+ +A + M
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFC-NVGKVYKAMALLDQM 361
Query: 282 VDEGIPPYSSTVEML 296
+ G+ P T +L
Sbjct: 362 RECGVEPDVVTYNLL 376
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G++P + + L+ C H++ A + + + TY++L+ L G+
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD + R + + N+++ +CK G D A L +M S G PD ++YS
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ +D M + ++ P+ Y +I +L K A ++ +M+ G
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y + +C+ ++ A ++ M K ++ D YN ++ +G+ D A
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV 600
Query: 240 EVWESMEKRGFYPSVSTYSV 259
+ + M P+ T+ +
Sbjct: 601 TILKHMTGVASMPNHFTFFI 620
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P +Y+ I A C D+ R L M R P+ FT+N +I C+ ++++ A L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
D+M RG + D SY A++ C+ V+ AL L +E PD +T+ ++K L
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELF----RELEQPDMYTHAALVKGLCD 242
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
R + + + M++ G+ P+ Y+ +V C+++ K EEA K M D G+ P +
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQ-KAEEAEKMLNEMFDNGLVPCAV 301
Query: 292 TVEMLRN 298
T + N
Sbjct: 302 TCTAVVN 308
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 120/295 (40%), Gaps = 18/295 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G P Y + LCK K + F D + + P+ Y+I++ L
Sbjct: 466 MVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERN 525
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +++ +M+ C D++ + + + A C G + EA ++ EM+ G DA +Y+
Sbjct: 526 YGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNT 585
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI----------------IRKLCKNE 163
I +L M +PN FT+ + + K
Sbjct: 586 LIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTI 645
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++ + ++L + M + +Y AIL + ++ L++ M ++++ + Y
Sbjct: 646 ELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYT 705
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++ ++ + A + SM GF P++ +Y ++ G +G+ + A + F
Sbjct: 706 SLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGF-TAEGQADRAKEIF 759
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 123/320 (38%), Gaps = 52/320 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KPS + ++ L K ++ +A + + +P V TY+ VR + G
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGR 560
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + EM + VD +A+N+L++ G D A +L+ M + + P+ F++ I
Sbjct: 561 LHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFI 620
Query: 120 ---------------------------------------------------FIHAFCEAN 128
+ F E
Sbjct: 621 LLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEER 680
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ V ++ MK +L N Y ++ CK +A+ LL MI G P+ SY
Sbjct: 681 RLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQ 740
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+L+ + + A + + + D + +++ L+R G D ++ +E+
Sbjct: 741 YLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQM 800
Query: 249 GFYPSVSTYSVMVHGLCKKK 268
PS TY+++ L ++
Sbjct: 801 KCKPSDETYAMLTEELSTRE 820
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P V TY+IL+RG VGEL + F EM C +++ +N+L++A CK G IDEA G
Sbjct: 7 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L+ M S G +P+ SY++ I+ C + + +L+ M P+ TYN ++ C
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K +A + EM+ G +P +Y A++ C +N A+ +M + P+
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY ++ R G + A + M + GF PSV TY+ +HG C + ++EEA +
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE-RMEEALGVVQE 245
Query: 281 MVDEGIPP 288
MV++G+ P
Sbjct: 246 MVEKGLAP 253
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L+ A CK + A + + P + +Y++++ GL G + EA
Sbjct: 40 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 99
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM + D + +N+LL CK GN +A + EM G P +Y+ I++
Sbjct: 100 WEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 159
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ D M+ L PN TY +I + + EAY++L+EM E G +P
Sbjct: 160 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 219
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA + HC + AL ++ M ++ + PD +Y+ ++ R G DRA ++ +
Sbjct: 220 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 279
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++G P TYS ++ GLC+ + +L EAC + M+D G+PP T L N
Sbjct: 280 EMVEKGVSPDAVTYSSLIQGLCEMR-RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 338
Query: 304 GFLDIIEILADKM 316
G L+ L D+M
Sbjct: 339 GDLNKALHLHDEM 351
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 178/383 (46%), Gaps = 54/383 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G+ PS+ L++++CK +++ A +FFD + P +TY+ L+ G G
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA ++ +EM E ++ +N+ + C ++EA G+++EM G PD SYS
Sbjct: 201 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ F++ M + P+ TY+ +I+ LC+ ++ EA L EM++ G
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y ++ +C ++N AL L M + +PD TY++++
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL ++ G A V+ESM +R
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF-LDI 308
P + Y+V++HG C + G L +A ++ M+ G P++ TV L L G ++
Sbjct: 441 HKPGEAVYNVIIHGHC-RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 499
Query: 309 IEILADKMERSTSCTIQELANAM 331
E++ D + RS ELA +
Sbjct: 500 SEVIGDTL-RSCRLNEAELAKVL 521
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 10/301 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P + LL+ CK + HQ + ++ +P+V TY+ L+ + L
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNF---HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A + FD+M R + + +L++ + G ++EA+ +L EM G P +Y+ F
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH C + V+ M L P+V +Y+ II C+ +++ A+Q+ EM+E+G
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD +Y++++ C+ + A L M + PD TY ++ G ++A
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP---YSSTVEMLR 297
+ + M +GF P TYSV+++GL K+ E F+++ +E +P Y + +E
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406
Query: 298 N 298
N
Sbjct: 407 N 407
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M+ + ++ +N L+ C G + + G EM G P+ +Y+ I A+C+
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I F +L SM + PN+ +YN II LC+ ++EA+++L+EM +G PDE +YN
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+L +C + AL + M + V P TY ++ + + +RA E ++ M RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+ TY+ ++ G ++G L EA + M + G P
Sbjct: 181 LRPNERTYTTLIDGF-SRQGLLNEAYRILNEMTESGFSP 218
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 159/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+KP++ + +++ +CK ++ A + FD K P +Y+ LV G VG
Sbjct: 218 MREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGC 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F EM + D++ SL+ MCKAGN++ A G++REMR G + + +++
Sbjct: 278 SHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTA 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + + M++ + P+V YN +I C +++EA +L+ EM +G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ IL+ +C + + A +L +M + V+PD TY+ ++++L R A
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++M G P TY+ ++ G C K+G +E A + MV G+ P T +L N
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHC-KEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 300 L 300
L
Sbjct: 517 L 517
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 2/278 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P+V Y+ ++ L D L AR+ FD ML ++ +N L+ A+C G+ EA
Sbjct: 119 YAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+LR+MR G +P+A +Y+ + AFC A ++ R++D M+ L PN+ T+N ++ +
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK ++E+A ++ DEM++ G PD SYN ++ +C + AL + MT++ +MPD
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T+ ++ ++ + G +RA + M +RG + T++ ++ G C KKG L++A
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFC-KKGFLDDALLAVR 356
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
M I P L N +G +D L +ME
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+ P++Y + L+ ALC R H K A + + P TY+ LV GE
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L D M E +++ NS++ +CKAG +++A + EM G PD SY+
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNT 267
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ H V M R ++P+V T+ +I +CK +E A L+ EM ERG
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+E ++ A++ C + ++ AL + M + + P YN ++ VGR D A
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEAR 387
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E+ ME +G P V TYS ++ C K G A + + M++ G+ P YSS + +
Sbjct: 388 ELVREMEAKGVKPDVVTYSTILSAYC-KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRV 446
Query: 296 L 296
L
Sbjct: 447 L 447
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 162/350 (46%), Gaps = 53/350 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
M GI P + L+H +CK +++ A + + T++ L+ G G
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A EM + + ++ +N+L+ C G +DEA ++REM + G +PD +YS
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+C+ D HS F++ M ++P+ TY+ +IR LC+ +++ +A+ L MI G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE +Y +++ HC V AL L M K V+PD TY++++
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL ++ G + A +V++S+ R
Sbjct: 528 RLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRN 587
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
+ S YSV++HG C ++G + +A + + M+ G P S ST+ ++R
Sbjct: 588 WNLDGSVYSVLIHGHC-REGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 111/301 (36%), Gaps = 53/301 (17%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP + +L A CK A Q ++ P TYS L+R L + L +A
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF M+ D + + SL++ CK GN++ A + EM G PD +YS+ I+
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL----------- 172
++ R+L + VP Y+ ++R C+N +++ LL
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLKGFCMKGLMNE 575
Query: 173 -----DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP---------- 217
+++R N D Y+ ++ HC V AL +M + P
Sbjct: 576 ADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIR 635
Query: 218 -------------------------DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
D ++ L ++ G D +V M + G P
Sbjct: 636 GLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695
Query: 253 S 253
S
Sbjct: 696 S 696
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P L+ CK +V+ A D K P V TYS+L+ GL
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Query: 60 LSEARKLFDEML-ERKCPVDI-------LAHNS-------LLEAMCKAGNIDEAHGMLRE 104
EA++L ++ E P +I N+ LL+ C G ++EA + +
Sbjct: 523 TKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQS 582
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
+ D YS+ IH C ++ M + PN + +IR L +
Sbjct: 583 ILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGM 642
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
V EA Q++ +++ + D + A++ + V+ L ++ M ++ ++P
Sbjct: 643 VVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 169/320 (52%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MVE +P + ++ +LCK + V A F + + +PTV TY+ L+ G+ + G+
Sbjct: 235 MVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQ 294
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF EMLE D++ + L++A+CK G + EA + +M I EPD +YS
Sbjct: 295 WKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+++ +L+ M N+ P+V T++ + CK V EA +++ MIERG
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C ++++ A ++ M + PD +YN+++K + R D A
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++ M +G P+ T++ ++ GLC + G+ A + F+ M G PP T L +
Sbjct: 475 QLFDEMSHKGLTPNSITHTTLISGLC-QAGRPYAAKELFKKMGSHGCPPDLITYSTLLSG 533
Query: 300 LVGLGFLDIIEILADKMERS 319
G LD L + +++S
Sbjct: 534 FCKHGHLDEALALFEALKKS 553
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+ + G KPSI + L++ LC + A + D + PTV T++++V GL +G+
Sbjct: 165 IFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK 224
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +M+E C ++++++ +++++CK ++EA + MRSIG P +Y+
Sbjct: 225 TSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS 284
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + + M +N+ P+V T++ ++ LCK V EA + +MI+
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA 344
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ C + + L+ M N+ PD T+++ + + + G A
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M +RG P+V TY+ ++ G C +++EA K F++MV++G P
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGYCLHS-QMDEARKVFDIMVNKGCAP 452
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E+ +KP + L+ ALCK V A F + P + TYS L+ G+
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E+ L +EML R D++ + ++ CK G + EA ++ M G P+ +Y+
Sbjct: 365 WKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C + + +V D M P+V +YN +I+ CK+E+++EA QL DEM +G
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++ +++ C A L +M PD TY+ +L + G D A
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E+++K P+ +++ G+C K GKLE+A + F + E + P
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMC-KAGKLEDAKELFSSLSIEELQP 592
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 1/255 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ ++P I L+H +CK K + + P V T+SI V G
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM 399
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA+ + + M+ER +++ +NSL++ C +DEA + M + G PD SY+I
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNI 459
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C++ I ++ D M L PN T+ +I LC+ + A +L +M G
Sbjct: 460 LIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG 519
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ +L+ C ++ AL L + K + P+ ++L + + G+ + A
Sbjct: 520 CPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAK 579
Query: 240 EVWESMEKRGFYPSV 254
E++ S+ P V
Sbjct: 580 ELFSSLSIEELQPDV 594
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH------VKVAHQFFDNA------------------ 36
MV P I +QLL AL + KH + +FF +
Sbjct: 95 MVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHL 154
Query: 37 ------------KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
K F P++ T++ L+ GL G + EA + D ++ R + H
Sbjct: 155 VGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTM 214
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ +CK G A +++M + EP+ SYSI I + C+ ++ + M+
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P V TYN +I +C + + ++A L EM+E PD +++ ++ C V AL
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ +M + + PD TY+ ++ + + + ++ + M R P V T+S+ V
Sbjct: 335 SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVF 394
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C KKG + EA +M++ G+ P
Sbjct: 395 C-KKGMVSEAQSIINLMIERGLRP 417
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G +A F++M+ I N LL A+ + + D + R+M G
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
++ +I I+ C + + F VL + + P++ T+N +I LC ++ EA + LD
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDY 199
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
++ RG P +++ I+ C + + A+ + +M + + P+ +Y++++ L +
Sbjct: 200 IMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRL 259
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
+ A +++ M G P+V TY+ +++G+C G+ ++A F+ M++ + P T
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMC-NSGQWKQASILFKEMLEWNMKPDVVTFS 318
Query: 295 MLRNRL 300
+L + L
Sbjct: 319 ILVDAL 324
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 159/317 (50%), Gaps = 1/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + + ++ LL L + K K A F+ + FTP ++TY++L+ G + L
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNL 388
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA + ++EM+++ DI+AH+++LE + K +A + M++ G P+ +Y+I
Sbjct: 389 VEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTIL 448
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + D M P+ Y C+I +K+++ Y LL EM E+G
Sbjct: 449 IRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGC 508
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
D +YNA++ +R + A+R+ +M + + P HTYNM++K ++
Sbjct: 509 PADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCA 568
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M ++G P ++Y V + GL + G+ EEAC+Y E M+++G+
Sbjct: 569 VWKEMGRKGCCPDDNSYIVFIGGLI-RHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADF 627
Query: 301 VGLGFLDIIEILADKME 317
G DI+E LA KM+
Sbjct: 628 SRAGKPDILEELARKMK 644
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M++ G KP I +L L K K A + F+ K + +P V+TY+IL+R L +
Sbjct: 398 MIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMK 457
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + FDEM++ C D + L+ +D+ + +L+EM+ G D +Y+
Sbjct: 458 MKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNA 517
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I R+ M + + P + TYN +++ E + EM +G
Sbjct: 518 LIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKG 577
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ SY + A R + M ++ + + YN R G+ D
Sbjct: 578 CCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILE 637
Query: 240 EVWESMEKRGFY 251
E+ M+ G +
Sbjct: 638 ELARKMKFEGKF 649
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 6/224 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+N+++ + + + GML EM G ++SI I AF A + V + M
Sbjct: 271 TYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELM 329
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
KRYN V T NC++ L + + +EA L +++ +R P+ +Y +L C +
Sbjct: 330 KRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKNL 388
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A R M + PD ++ +L+ L++ + A +++E M+ +G P+V TY+++
Sbjct: 389 VEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTIL 448
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ LCK+ K++EA +YF+ MVD G P ++ L + G G
Sbjct: 449 IRDLCKQM-KMKEAVEYFDEMVDSGCQPDAAVYTCL---ITGFG 488
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 55 GDVGELSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGA 110
GD+ E++ E + R C V ++ A + +EA+ N+D +H ++ + R A
Sbjct: 189 GDLDEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHA 248
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
AF + FC A ++ N TYN ++ L + + E
Sbjct: 249 RKPAFRF------FCWAG------------QKAGFTHNSRTYNAMMSVLGRTRQFESMMG 290
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+L EM E+G E +++ + E A+ + M + N T N +L L
Sbjct: 291 MLGEMGEKGLLTME-TFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLG 349
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R A ++E +E R F P++ TY+V+++G C+ K L EA + + M+D+G P
Sbjct: 350 RAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIK-NLVEAGRTWNEMIDKGFKP 405
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGD 56
M E G P ++ + L+ LC K + A + + + +P V +Y+ ++ G
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
GE+ +A LF EM+ + P D++ +NSL++ +CKA +D+A +L+ M G PD +
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I I +C + R+L M L P+V TY+ +I+ CK + EA + D M+
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G P+ Y+ +L + + + L+ M ++ + + +N+++ + G D
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 392
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+A + M + G P V +YS ++H LC K G++E+A +F MV EG+ P + L
Sbjct: 393 KAMTAFTEMRQNGLRPDVVSYSTVIHILC-KTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451
Query: 297 RNRLVGLGFLDIIEILADKM 316
+ L +G +E LA +M
Sbjct: 452 IHGLCSIGEWKKVEELAFEM 471
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G++P + ++H LCK V+ A F+ E +P + +++ L+ GL +GE
Sbjct: 401 MRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE 460
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +L EM+ R D + N++++ +CK G + EA + IG +PD SY+
Sbjct: 461 WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNT 520
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE----- 174
I +C + + LD M L P+ +TYN ++ KN +VE+A L E
Sbjct: 521 LIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580
Query: 175 ------------------------------MIERGANPDEWSYNAILAYHCDRAEVNMAL 204
M++RG +YN +L C+ + V+ AL
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ + + D T+++V+ L++VGR D A ++ +M RG P V TYS+M+
Sbjct: 641 RMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH 700
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++G LEE+ F M G S + ++ RL+ G
Sbjct: 701 I-EEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKG 739
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 5/275 (1%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML-REMR 106
IL+R VG L A F L+ V + N L++ +C D+A M+ R M
Sbjct: 95 GILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMP 154
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR---YNLVPNVFTYNCIIRKLCKNE 163
+G PD FSY+ I C +L M YN PNV +YN +I K
Sbjct: 155 ELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEG 214
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+V++AY L EM+ +G PD +YN+++ C ++ A+ ++ M + VMPD TYN
Sbjct: 215 EVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++++ +G+ + A + + M G P V TYS+++ C K G+ EA F+ MV
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC-KIGRCAEARSVFDSMVR 333
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+G P S+ +L + G L + L D M R
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 368
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 8/292 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR----KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+ G+ P + + L+ LCK K V + FD P +TY+I++RG
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG---VMPDTRTYNIMIRGYCS 282
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+G+L EA +L +M D++ ++ L++ CK G EA + M G +P++
Sbjct: 283 LGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 342
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I +H + + V +LD M R + +N +I K+ V++A EM
Sbjct: 343 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 402
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+ G PD SY+ ++ C V A+ +M E + P+ ++ ++ L +G +
Sbjct: 403 QNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 462
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ E+ M RG +P + ++ LC K+G++ EA +F+M++ G+ P
Sbjct: 463 KVEELAFEMINRGIHPDAIFMNTIMDNLC-KEGRVVEAQDFFDMVIHIGVKP 513
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 141/331 (42%), Gaps = 3/331 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + L+ CK A FD+ + P Y IL+ G G L +
Sbjct: 300 GLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 359
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L D M+ P + A N L+ A K G +D+A EMR G PD SYS IH
Sbjct: 360 RDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHI 419
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M L PN+ ++ +I LC + ++ +L EMI RG +PD
Sbjct: 420 LCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 479
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
N I+ C V A + V PD +YN ++ VG+ D + + +
Sbjct: 480 AIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLD 539
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P TY+ +++G K G++E+A + M + + + T ++ + L
Sbjct: 540 RMVSIGLRPDSWTYNSLLNGYF-KNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQA 598
Query: 304 GFLDIIEILADKM-ERSTSCTIQELANAMRG 333
G + L KM +R T I+ + G
Sbjct: 599 GRIVAARELYMKMVDRGTQLRIETYNTVLGG 629
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 5/238 (2%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A LF+ M+ + L+ C G +D A G + + I
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 123 AFCEANDIHSVF-RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA- 180
C+ N V M P+VF+YN +I+ LC +K +EA +LL M G
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 181 --NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P+ SYN ++ EV+ A L M + + PD TYN ++ L + D+A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + M +G P TY++M+ G C G+LEEA + + M G+ P T +L
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYC-SLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 36/304 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P ++ ++ LCK V A FFD H P V +Y+ L+ G VG+
Sbjct: 471 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGK 530
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E+ K D M+ D +NSLL K G +++A + REM + A + +I
Sbjct: 531 MDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 590
Query: 120 FIHAF-----------------------------------CEANDIHSVFRVLDSMKRYN 144
+H CE + + R+ + ++
Sbjct: 591 MLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 650
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+V T++ +I L K +++EA L M+ RG PD +Y+ ++ H + + +
Sbjct: 651 FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESD 710
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M K D H N++++ L+ G RA ++++ F ST ++++ +
Sbjct: 711 NLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIV 770
Query: 265 CKKK 268
+KK
Sbjct: 771 SEKK 774
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 150/292 (51%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M EFG P++ + LL LC K V+ A H ++ TP V TY+ ++ GL
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ A + M+++ +D++ ++++++ +CKA +D A G+L+ M G +PD +
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+A + VL M + P+V TYN II LCK + V+ A +L MI
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++ PD +YN ++ + E +R + M + PD TY+++L L + G+
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A +++ M ++G P+V+ Y +++HG +G + + ++MV GI P
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGY-AARGAIADLTDLLDLMVANGISP 442
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y + +L A K+ + A H F ++H +P V TY IL+ L +G
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ + + NSL+ +C ++A + EM G P+ ++
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + R++DSM+R + PNV +YN +I C + +EA QLLD M+ G
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG 614
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SY+ +L +C ++ A L M ++ V P TY+ +L+ L RF A
Sbjct: 615 LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAK 674
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ +M K G + TY+++++GLCK ++EA K F+ + + + P
Sbjct: 675 ELYLNMIKSGQQWDIYTYNIILNGLCKTNC-VDEAFKIFQSLCSKDLRP 722
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 144/291 (49%), Gaps = 2/291 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G+K + ++ LCK + V A + + P V TY+ ++ GL
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + M+++ D++ +N++++ +CKA +D A G+L+ M +PD +Y+
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + + V R L+ M L P+V TY+ ++ LCKN K EA ++ MI +G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y +L + R + L+ M + P+ + +N+VL + D A
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
++ M + G P V TY +++ LC K G++++A F M+++G+ P S
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALC-KLGRVDDAVLKFNQMINDGVTPNS 514
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 149/319 (46%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G+KP + + ++ LCK + V A + + P V TY+ ++ GL
Sbjct: 260 MIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + M+++ DI +N L+ G E L EM + G +PD +YS+
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ ++ M R + PNV Y ++ + + LLD M+ G
Sbjct: 380 LLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ + +N +L + +A ++ A+ + +RM++ + PD TY +++ L ++GR D A
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M G P+ ++ +V+GLC + E+A + F M D+G+ P +
Sbjct: 500 LKFNQMINDGVTPNSVVFNSLVYGLCTVD-RWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Query: 300 LVGLGFLDIIEILADKMER 318
L G + + + L D MER
Sbjct: 559 LCNEGQVMVAQRLIDSMER 577
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 163/335 (48%), Gaps = 9/335 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L++ LC + A + FF+ P V ++ ++ L + G+
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L D M +++++N+L+ C AG DEA +L M S+G +PD SY
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ I + + + M R + P TY+ I++ L + EA +L MI+ G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN IL C V+ A ++ + +++ P+ T+ +++ +L + GR A
Sbjct: 685 QQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ S+ G P+V TY +M+ + ++G L+E F M G P S + +
Sbjct: 745 DLFASIPSHGLVPNVVTYCIMMKNII-QEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803
Query: 300 LVGLG-------FLDIIEILADKMERSTSCTIQEL 327
L+G G +L I+ + +E ST+ + L
Sbjct: 804 LLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISL 838
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + LL LCK A + F+ + P V Y IL+ G G +++
Sbjct: 369 GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADL 428
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ + N +L A K IDEA + M G PD +Y I I A
Sbjct: 429 TDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDA 488
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M + PN +N ++ LC ++ E+A +L EM ++G P+
Sbjct: 489 LCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N I+ C+ +V +A RLI M + V P+ +YN ++ GR D A ++ +
Sbjct: 549 VVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLD 608
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M G P + +Y ++ G C K G+++ A F M+ +G+ P + T
Sbjct: 609 VMVSVGLKPDLISYDTLLRGYC-KTGRIDNAYCLFREMLRKGVTPGAVT 656
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 5/259 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG- 100
P + TYSIL +G + F +L+ V+ + N LL +C A +DEA
Sbjct: 88 PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR---YNLVPNVFTYNCIIR 157
+LR M G P+ S + + C + +L +M N PNV TYN II
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
LCK + V+ A +L MI++G D +Y+ I+ C V+ A ++ M + V P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D TYN ++ L + DRA V + M +G P V TY+ ++ GLCK + ++ A
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA-VDRADGV 326
Query: 278 FEMMVDEGIPPYSSTVEML 296
+ M+D+ + P T L
Sbjct: 327 LQHMIDKDVKPDIQTYNCL 345
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP + D LL CK + A+ F + + TP TYS +++GL
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M++ DI +N +L +CK +DEA + + + S P+ +++I
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + S+ + LVPNV TY +++ + + ++E L M + G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
PD NAI+ R E+ A ++++ + N + T ++++ L R
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 47/279 (16%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA---GNIDEAHGMLREMR---SI 108
G +G + +A KLFDE+L P + A N LL + +A + A + M S
Sbjct: 26 GSLG-IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSN 84
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFR--------------------------------- 135
PD +YSI FC I F
Sbjct: 85 KVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEA 144
Query: 136 ---VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN---PDEWSYNA 189
+L M + +PNV + N +++ LC ++VEEA +LL M E G P+ +YN
Sbjct: 145 MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT 204
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
I+ C V+ A ++ M + V D TY+ ++ L + DRA V + M +G
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P V TY+ ++ GLCK + ++ A + M+D+G+ P
Sbjct: 265 VKPDVVTYNTIIDGLCKAQA-VDRAEGVLQHMIDKGVKP 302
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G + IY + +L+ LCK V A + F + + P + T++I++ L G
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF + +++ + +++ + + G +DE + M G PD+ +
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE------KVEEAYQLLD 173
I + +I L + N T + +I + E + E Y L+
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEKYLFLE 859
Query: 174 EM 175
E+
Sbjct: 860 EV 861
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 151/268 (56%), Gaps = 3/268 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF--FDNAKHEFTPTVKTYSILVRGLGDVG 58
M+E G++P ++ + ++ +C+ V A +F + +AK + P V +YSIL+RGL +
Sbjct: 51 MIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKG-YAPDVISYSILLRGLLNQR 109
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ + KL +ML + C +++ ++ L+ ++C+ G ++EA +L+ M+ G PDA+SY
Sbjct: 110 KWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYD 169
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I AFC+ + + L+SM +P++ YN I+ LCKN K +EA ++ +++ E
Sbjct: 170 PLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEV 229
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ SYN + + AL +I M +++ PD TYN ++ L R D+A
Sbjct: 230 GCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQA 289
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK 266
E+ ME + PSV +Y++++ GL K
Sbjct: 290 IELLVDMESSVYQPSVISYNIVLLGLSK 317
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 142/282 (50%), Gaps = 9/282 (3%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ TY+IL+ G + + KL DEM+E D+ N+++ MC+ G +D A +
Sbjct: 24 SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
R + + G PD SYSI + +++ M PNV TY+ +I LC++
Sbjct: 84 RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
KVEEA LL M E+G PD +SY+ ++A C + V++A+ + M + +PD Y
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNY 203
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM- 281
N +L L + G+ D A +++E + + G P+VS+Y+ + L K+ EM+
Sbjct: 204 NTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLS 263
Query: 282 --VDEGIPPYSSTVEML-RNRLVGLGFLDIIEILADKMERST 320
+D Y+S + L R+ +V IE+L D ME S
Sbjct: 264 KDIDPDEITYNSLISCLCRDAMVD----QAIELLVD-MESSV 300
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 117/234 (50%), Gaps = 1/234 (0%)
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
L++ P+ ++ + L+EA G +D+ +L EM G PD F ++ + C +
Sbjct: 17 LQQTNPISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLV 76
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
F + + P+V +Y+ ++R L K E+ +L+ +M+ +G P+ +Y+ +
Sbjct: 77 DRAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSIL 136
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++ C +V A+ L+ M ++ + PD ++Y+ ++ + R D A E ESM G
Sbjct: 137 ISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGC 196
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
P + Y+ ++ LC K GK +EA K FE + + G PP S+ L + L G
Sbjct: 197 LPDIVNYNTILSTLC-KNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSG 249
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + LL L ++ + + D P V TYSIL+ L G++ EA
Sbjct: 90 GYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEA 149
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L M E+ D +++ L+ A CK +D A L M S G PD +Y+ +
Sbjct: 150 VSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILST 209
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ + + PNV +YN + L + A ++ EM+ + +PD
Sbjct: 210 LCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPD 269
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
E +YN++++ C A V+ A+ L+ M P +YN+VL L +V R A E
Sbjct: 270 EITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISDAIE 326
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 160/319 (50%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +FG+K D+++LL LCK + V+ A FD K F +K+Y+IL+ G G
Sbjct: 99 MEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKN 158
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS ++++EM + D++ + L+ A CK+ D+A + EM + +P Y
Sbjct: 159 LSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCT 218
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + K VP TYN ++ C +E++++ + +DEM + G
Sbjct: 219 LINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGG 278
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y+ IL + + +A + +M+ E P TY +++++ R D A
Sbjct: 279 VGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAI 338
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+VW+ M+ +G P + +S +++ LC + KL+EAC YF+ M+D GI P + L+
Sbjct: 339 KVWDQMKAKGILPVMHMFSTLINSLC-HESKLDEACMYFQEMLDVGIRPPAQLFSNLKQN 397
Query: 300 LVGLGFLDIIEILADKMER 318
L+ G D + + K+++
Sbjct: 398 LLDEGKKDTVVVFERKLDK 416
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 1/292 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G + S L+ +L K K V + K + +T++++ R ++ EA
Sbjct: 34 GFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFALISRRYARARKVKEAV 93
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
F +M + ++ N LL+ +CK+ ++ A + +M G D SY+I + +
Sbjct: 94 DAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGW 153
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ ++ + V + MK P+V TY +I CK+ + ++A +L EM + P
Sbjct: 154 GQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSP 213
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
Y ++ ++ AL +P+ TYN V+ R D +
Sbjct: 214 HIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDE 273
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M K G PS TY +++H L + GK + A F+ M EG P ST E++
Sbjct: 274 MRKGGVGPSARTYDIILHHLI-RAGKTKIAYSVFQKMSCEGCQPSVSTYEII 324
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G +P + L++A CK R++ F + P+ Y L+ GLG
Sbjct: 169 MKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKR 228
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSEA + F+ + +N+++ A C + +D+ + EMR G P A +Y I
Sbjct: 229 LSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDI 288
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H A + V M P+V TY I+R C ++V+ A ++ D+M +G
Sbjct: 289 ILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKG 348
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P ++ ++ C ++++ A M + P ++ + + L+ G+ D
Sbjct: 349 ILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVV 408
Query: 240 EVWESMEKRGFYPSVS 255
++K P VS
Sbjct: 409 VFERKLDKLRKAPLVS 424
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 152/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGE 59
E G P ++ LL +LC + A +P V Y+ ++ G G+
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D + ++S++ A+CKA +D+A LR+M + G P+ ++Y+
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R +++P+V T+N ++ LCK K++EA + D M +G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SYN +L + + + L M + + P T+N+++K G D+A
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P+V TY+ ++ LC + GK+++A + F M+D+G+ P
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 462
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 37/343 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI P ++HALCK + + A F ++ P TY+ L+ G G+
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM + D++ N L+ ++CK G I EA + M G PD FSY+I
Sbjct: 305 WKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 120 -----------------------------------FIHAFCEANDIHSVFRVLDSMKRYN 144
I A+ + + + M+ +
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PNV TY +I LC+ K+++A + ++MI++G PD+++Y+ ++ C + A
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LI+ + + D ++ ++ L ++GR A +++ G +P+ YS+++ G
Sbjct: 485 ELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 545 C-LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 52/356 (14%)
Query: 12 DLDQLLHALCK-------RKHVKVAHQFFDNAKHE------FTPTVKTYSILVRGLGDVG 58
DL+ L A+ + R +A F+ A +PT TY+IL+
Sbjct: 66 DLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAH 125
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSY 117
A F ++L VDI+ N LL+ C+A DEA +L +G PD FSY
Sbjct: 126 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185
Query: 118 SIFIHAFCEA-------------------------------------NDIHSVFRVLDSM 140
SI + + C+ D++ + M
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 245
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + P+ TY+ ++ LCK +++A L +M+ +G P+ W+YN ++ + +
Sbjct: 246 VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQW 305
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+R+ M +++++PD T+NM++ L + G+ A +V+++M +G P V +Y++M
Sbjct: 306 KEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 365
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++G KG L + F++M+ +GI P T +L G LD I+ ++M
Sbjct: 366 LNGY-ATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + +L+ + + FD + P + T+++L++ + G L +A
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA 413
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F+EM + ++L + +++ A+C+ G +D+A +M G PD ++Y I
Sbjct: 414 MIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 473
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ + + ++ ++ II LCK +V +A + D + G +P
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y+ ++ +C ++ ALR+ M + P+ Y ++ ++GR D ++
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
M ++G PS Y++++ GL + + K+ EM
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P I + L+ A + A F+ + H P V TY+ ++ L +G+
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M+++ D A++ L++ C G++ +A ++ E+ + G D +S
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + D L P Y+ ++ C K+E+A ++ D M+ G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ Y ++ +C ++ L L M ++ + P YN+++ L GR A
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ M + G + TYS+++ GL K +
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGLFKNR 653
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI+P+ L++ CK + F + + P+ Y+I++ GL + G
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+ F EM E ++ ++ +L + K DEA + +E+R++ + D + +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + S+ R LVP V TY+ +I L K VEEA + M G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
PD N ++ + E+ A ++++ + N + T +++ L G
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P+ L+ C ++ A + FD P Y LV G +G +
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML++ + +N +++ + +AG A EM G + +YSI
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ ++ T N +I + + +VEEA L + G
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +Y+ ++ V A + + M PD N V++ L++ RA
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVD-LFSSKGTCREHIRFL 802
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI+P +Y +++ CK ++K A FD + P TY L+ G GE
Sbjct: 288 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 347
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + ++M + V+ + N+L++ CK G IDEA + M+ G E DAF+ +I
Sbjct: 348 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 407
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FC +N R+L +M+ + PNV +++ +I CK + EA +L M ++G
Sbjct: 408 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 467
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNA + +C + ++ A +LI M + +MPD +TY ++ G DRA
Sbjct: 468 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRAL 527
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E++ M + G +V TY+V++ GL K G+ +EA K ++ M EGI P YSS +
Sbjct: 528 ELFNEMPQLGLNRNVVTYTVIISGL-SKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 586
Query: 296 L 296
L
Sbjct: 587 L 587
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KPS+ + LL+ + K V ++ K+ V TY++L+ ++ EA
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEML++ D+ + S++ CK GN+ A + EM P+A++Y I+
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A ++ + +++ M+ + N +N ++ CK ++EA +L + M ++G D
Sbjct: 342 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ N I + C A RL+ M + V P+ ++++++ + + F A +++
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 461
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
MEK+G PSV TY+ + C KKGK+EEA K M + G+ P + T
Sbjct: 462 VMEKKGKAPSVVTYNAFIERYC-KKGKMEEAYKLINEMQERGLMPDTYT 509
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 136/282 (48%), Gaps = 4/282 (1%)
Query: 7 KPSIYD--LDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
+PSI + D L + + + FD A K F ++ + L G +
Sbjct: 117 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELC 176
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +M++ + + + ++++ +CK G + A ++ E+ G +P +Y+ ++
Sbjct: 177 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 236
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ E D+ V +L M++ + NV TY +I ++ K+EEA +L DEM+++G PD
Sbjct: 237 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 296
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y +I+ ++C + A L MT+ ++P+ +TY ++ + G A +
Sbjct: 297 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 356
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M+ +G + ++ ++ G C KKG ++EA + +M +G
Sbjct: 357 DMQSKGVDVNRVIFNTLMDGYC-KKGMIDEALRLQNIMQQKG 397
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V +++ +V GL GE+ A+ L DE++ + ++ +N+LL + ++ + +L
Sbjct: 192 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M + + +Y++ I + ++ I ++ D M + + P+V+ Y II CK
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++ A+ L DEM ER P+ ++Y A++ C E+ A ++ M + V +R +N
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + G D A + M+++GF T +++ G C+ + EEA + M +
Sbjct: 372 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN-RREEAKRLLLTMEE 430
Query: 284 EGIPPYSSTVEML 296
G+ P + +L
Sbjct: 431 RGVAPNVVSFSIL 443
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M E G+ P Y L+ +V A + F+ V TY++++ GL G
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG 93
EA KL+DEM + D ++SL+ ++ K G
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI+P +Y +++ CK ++K A FD + P TY L+ G GE
Sbjct: 284 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 343
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + ++M + V+ + N+L++ CK G IDEA + M+ G E DAF+ +I
Sbjct: 344 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 403
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FC +N R+L +M+ + PNV +++ +I CK + EA +L M ++G
Sbjct: 404 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 463
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNA + +C + ++ A +LI M + +MPD +TY ++ G DRA
Sbjct: 464 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRAL 523
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E++ M + G +V TY+V++ GL K G+ +EA K ++ M EGI P YSS +
Sbjct: 524 ELFNEMPQLGLNRNVVTYTVIISGL-SKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 582
Query: 296 L 296
L
Sbjct: 583 L 583
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KPS+ + LL+ + K V ++ K+ V TY++L+ ++ EA
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEML++ D+ + S++ CK GN+ A + EM P+A++Y I+
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A ++ + +++ M+ + N +N ++ CK ++EA +L + M ++G D
Sbjct: 338 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ N I + C A RL+ M + V P+ ++++++ + + F A +++
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 457
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
MEK+G PSV TY+ + C KKGK+EEA K M + G+ P + T
Sbjct: 458 VMEKKGKAPSVVTYNAFIERYC-KKGKMEEAYKLINEMQERGLMPDTYT 505
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 136/282 (48%), Gaps = 4/282 (1%)
Query: 7 KPSIYD--LDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
+PSI + D L + + + FD A K F ++ + L G +
Sbjct: 113 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELC 172
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +M++ + + + ++++ +CK G + A ++ E+ G +P +Y+ ++
Sbjct: 173 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 232
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ E D+ V +L M++ + NV TY +I ++ K+EEA +L DEM+++G PD
Sbjct: 233 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y +I+ ++C + A L MT+ ++P+ +TY ++ + G A +
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 352
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M+ +G + ++ ++ G C KKG ++EA + +M +G
Sbjct: 353 DMQSKGVDVNRVIFNTLMDGYC-KKGMIDEALRLQNIMQQKG 393
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V +++ +V GL GE+ A+ L DE++ + ++ +N+LL + ++ + +L
Sbjct: 188 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M + + +Y++ I + ++ I ++ D M + + P+V+ Y II CK
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++ A+ L DEM ER P+ ++Y A++ C E+ A ++ M + V +R +N
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + G D A + M+++GF T +++ G C+ + EEA + M +
Sbjct: 368 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN-RREEAKRLLLTMEE 426
Query: 284 EGIPPYSSTVEML 296
G+ P + +L
Sbjct: 427 RGVAPNVVSFSIL 439
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M E G+ P Y L+ +V A + F+ V TY++++ GL G
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG 93
EA KL+DEM + D ++SL+ ++ K G
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 159/317 (50%), Gaps = 5/317 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G++P++ + ++ LCKR VK A + + + P V T++ L+ GL G
Sbjct: 265 EMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTE 324
Query: 62 EARKLFDEML--ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF +++ E P ++L + +++ C+ ++ A +L M+ G P+ +Y+
Sbjct: 325 KAFRLFLKLVRSENHKP-NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTT 383
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + + +++ M PNV TYN I+ LCK +V+EAY++L G
Sbjct: 384 LIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG 443
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D+ +Y +++ HC +AE+ AL L +M K + PD H+Y ++ + R R +
Sbjct: 444 LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+E + G P+ TY+ M+ G C ++G L A K+F M D G S T L +
Sbjct: 504 MFFEEAVRFGLVPTNKTYTSMICGYC-REGNLRLALKFFHRMSDHGCASDSITYGALISG 562
Query: 300 LVGLGFLDIIEILADKM 316
L LD L D M
Sbjct: 563 LCKQSKLDEARCLYDAM 579
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 37/316 (11%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
P+ KT + +V+ + ++G + A LFDEM R + +++ ++ CK GN+ E+
Sbjct: 163 LAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESD 222
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
L M G D + S+ + FCE + L PN+ + C+I L
Sbjct: 223 RWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGL 282
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEW---------------------------------- 185
CK V++A+++L+EM+ RG P+ +
Sbjct: 283 CKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPN 342
Query: 186 --SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A+++ +C ++N A L++RM ++ + P+ +TY ++ + G F+RA E+
Sbjct: 343 VLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMN 402
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + GF P+V TY+ +V GLC KKG+++EA K + G+ T +L +
Sbjct: 403 VMNEEGFSPNVCTYNAIVDGLC-KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQ 461
Query: 304 GFLDIIEILADKMERS 319
+ +L +KM +S
Sbjct: 462 AEIKQALVLFNKMVKS 477
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP++ ++ C+ + + A K + P TY+ L+ G G A +
Sbjct: 340 KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYE 399
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M E ++ +N++++ +CK G + EA+ +L+ G + D +Y+I I C
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ +I + + M + + P++ +Y +I C+ ++++E+ +E + G P
Sbjct: 460 KQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNK 519
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +++ +C + +AL+ RM+ D TY ++ L + + D A ++++M
Sbjct: 520 TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAM 579
Query: 246 EKRGFYPSVSTYSVMVHGLCK 266
++G P T + + CK
Sbjct: 580 IEKGLTPCEVTRVTLAYEYCK 600
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI+P I+ L+ C+ K +K + FF+ A + PT KTY+ ++ G G
Sbjct: 474 MVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGN 533
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A K F M + C D + + +L+ +CK +DEA + M G P +
Sbjct: 534 LRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVT 593
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ +D S VL+ +++ V V N ++RKLC KV A +++++
Sbjct: 594 LAYEYCKIDDGCSAMVVLERLEKKLWVRTV---NTLVRKLCSERKVGMAALFFHKLLDKD 650
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
N + + A + + + ++ L R+ KEN
Sbjct: 651 PNVNRVTIAAFMTACYESNKYDLVSDLSARIYKEN 685
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G P++ + ++ LCK+ V+ A++ + ++ TY+IL+ E
Sbjct: 404 MNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAE 463
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF++M++ DI ++ +L+ C+ + E+ E G P +Y+
Sbjct: 464 IKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTS 523
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++ + M + + TY +I LCK K++EA L D MIE+G
Sbjct: 524 MICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKG 583
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
P E + + +C + A+ ++ R+ K+
Sbjct: 584 LTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKK 617
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 1/198 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++++ + G + EA M+ EM + G P + + + E + + D M
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN +Y ++ CK V E+ + L MIERG D + + I+ C++ V AL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R + + P+ + +++ L + G +A E+ E M RG+ P+V T++ ++ GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317
Query: 265 CKKKGKLEEACKYFEMMV 282
C KKG E+A + F +V
Sbjct: 318 C-KKGWTEKAFRLFLKLV 334
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 36/202 (17%)
Query: 153 NCIIRKLCKNEKVEEAYQ-----------------------------------LLDEMIE 177
C+++ + +V+EA + L DEM
Sbjct: 136 QCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCA 195
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ SY ++ +C V + R + M + + D T +++++ G R
Sbjct: 196 RGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTR 255
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + + G P++ ++ M+ GLC K+G +++A + E MV G P T L
Sbjct: 256 ALWYFRRFCEMGLRPNLINFTCMIEGLC-KRGSVKQAFEMLEEMVGRGWKPNVYTHTALI 314
Query: 298 NRLVGLGFLDIIEILADKMERS 319
+ L G+ + L K+ RS
Sbjct: 315 DGLCKKGWTEKAFRLFLKLVRS 336
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 166/311 (53%), Gaps = 2/311 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P ++ LCK K + A + A P Y+ ++ GL ++ EAR L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F++M++++ +++ +N+L+ +CKA I+ A+ + +EM G P SY+ I FC+
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D+ + V D M R N VPNV TY +I L K+ KV+ A ++LD M+++G P+ +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C V+ A +L+ +M + + P TYN++L L R + + A +++ M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+R +P+V TY+ ++ LC K +L+ A + + M+ +G PP + T + L L G +
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHK-QLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305
Query: 307 DIIEILADKME 317
+ L +KM+
Sbjct: 306 HEAQELMEKMK 316
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 1/230 (0%)
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ R P D L + ++E +CK ID+A + EM + G +PDAF Y+ + C+ +
Sbjct: 1 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+ + M + + PNV TYN +I LCK ++E AY+L EM +G P E SYN +
Sbjct: 61 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ C + ++ A + +M + N +P+ TY ++ L + G+ A EV + M K+G
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
P+V+TYS ++ G CK + +++EA K E MV +GI P T +L N L
Sbjct: 181 TPNVATYSCLIDGFCKVR-RVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M GIKP + + +L LC+ + V+ A F+ K P V TY+ L+ GL
Sbjct: 35 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 94
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF EM + +++N+L++ CK ++ A + +M P+ +Y+
Sbjct: 95 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I ++ + + VLD M + + PNV TY+C+I CK +V+EA++LL++M+ +G
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN +L C ++ A +L M + P TYN +L+ L + D A
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 274
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ M +G P TY + GL + GK+ EA + E M
Sbjct: 275 RLYAEMIAKGCPPDAITYDTLAWGL-TRAGKVHEAQELMEKM 315
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 130/247 (52%), Gaps = 1/247 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P++ + L++ LCK ++ A++ F + A + PT +Y+ L+ G +
Sbjct: 70 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A+ +FD+M+ C +++ + +L++ + K+G + A +L M G P+ +YS
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + ++L+ M + P V TYN ++ LC+ +K+E+A++L M +R
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN +L C +++ A RL M + PD TY+ + L R G+ A
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309
Query: 240 EVWESME 246
E+ E M+
Sbjct: 310 ELMEKMK 316
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P++ L+ L K V+ A + D K TP V TYS L+ G V
Sbjct: 140 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 199
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL ++M+ + ++ +N LL ++C+A +++A + R M P +Y+
Sbjct: 200 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 259
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C + R+ M P+ TY+ + L + KV EA +L+++M
Sbjct: 260 LLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 319
Query: 180 ANP 182
NP
Sbjct: 320 RNP 322
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 163/317 (51%), Gaps = 8/317 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P I L+ LL ALCK V+ A F K++ P TY+IL G V S ++
Sbjct: 372 QPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMRV 431
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYSIFIHA 123
+EM+E D +N+ +++ CKAG + EA + MR+ G+ P A +Y+I I A
Sbjct: 432 LEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILA 491
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+++ F+++ M ++P+V TY +I +C KVEEAY+ L+EM +G PD
Sbjct: 492 LVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPD 551
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L C+ + AL L RM + +P HT+NM++ + +G D A E W
Sbjct: 552 IVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWH 611
Query: 244 SMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M+KRG TY VM+ GL C K+E+AC + +V++GI + +L
Sbjct: 612 EMDKRGCARDTDTYCVMIEGLFNCN---KMEDACFLLDEVVNKGIKLPYRKFDCFLMQLS 668
Query: 302 GLGFLDIIEILADKMER 318
+G L I L++ M +
Sbjct: 669 MIGDLQAIHKLSEHMRK 685
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 10/257 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE----FTPTVKTYSILVRGLGD 56
M+E G P + + + + CK V A + F+ + + +PT KTY+I++ L
Sbjct: 435 MIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQ 494
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
E KL +M+ D+ + ++E MC AG ++EA+ L EM + G PD +
Sbjct: 495 SDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVT 554
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ F+ CE + M VP+V T+N +I + + + A++ EM
Sbjct: 555 YNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMD 614
Query: 177 ERGANPDEWSYNAILA--YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+RG D +Y ++ ++C++ E A L+ + + + ++ L L +G
Sbjct: 615 KRGCARDTDTYCVMIEGLFNCNKMED--ACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGD 672
Query: 235 FDRATEVWESMEKRGFY 251
++ E M K FY
Sbjct: 673 LQAIHKLSEHMRK--FY 687
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 38/184 (20%)
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAY-------------------------------- 169
R P + N ++ LCK VE+A
Sbjct: 368 RVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSR 427
Query: 170 --QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVM--PDRHTYNM 224
++L+EMIE G PD ++YN + C V A L M TK + M P TY +
Sbjct: 428 GMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAI 487
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ LV+ R + ++ + M G P VSTY ++ G+C GK+EEA K+ E M ++
Sbjct: 488 MILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMC-LAGKVEEAYKFLEEMGNK 546
Query: 285 GIPP 288
G P
Sbjct: 547 GYRP 550
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 146/292 (50%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P + + LL C K + A H D+ P V +Y+I++ G
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ +A LF EM++R +++ + ++++ +CKA +D A G+ ++M G +PD +
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + V R+L+ M + L P+ +TY ++ LC N + EA L D MI
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G P+ Y ++ + + ++ L+ M + + PD H +N++ + D
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A ++ M+++G P V Y ++ LC K G++++A F M++EG+ P
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALC-KLGRVDDAVLKFNQMMNEGVAP 446
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 132/289 (45%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G+KP Y LL+ LC + A FD+ + P V Y IL+ G G
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSE L + M+E D N + A K IDEA + +M+ G PD +Y
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + M + PN+F +N ++ LC +K E+A + EM+ +G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +N IL C + +V A RLI M + P +Y ++ VGR D A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M G P TY+ ++HG C + G++++A F M+ GI P
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYC-RAGRIDDAYGVFREMLRNGITP 586
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 35/366 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G+ P + + + A K+ + A F+ K + +P V Y L+ L +G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ +I NSL+ +C ++A EM + G PD ++
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + R++D M+R P V +Y +I C +++EA + LD M+ G
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDEW+YN +L +C ++ A + M + + P TY+ +L L RF A
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E++ +M G ++ Y+++++GL K
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
K G+ E+A F + G+ P T ++ L+ G+L+ + L ME+S +
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728
Query: 326 ELANAM 331
+ NA+
Sbjct: 729 RMLNAL 734
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 14/303 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ GI+P + + +L LC + V A + D + T P V +Y+ L+ G VG
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K D ML D +N+LL C+AG ID+A+G+ REM G P +YS
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 120 FIHA------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+H F EA +++ ++ S K++N ++ YN I+ L KN V+EA++L
Sbjct: 594 ILHGLFTTRRFSEAKELY--LNMITSGKQWN----IWIYNIILNGLSKNNCVDEAFKLFQ 647
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ + + ++N ++ A+ L ++ ++PD TY ++ + L+ G
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ +++ +MEK G P+ + +V L +G + A Y + ++ +ST
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL-HRGDITRAGAYLCKLDEKNFSLEASTT 766
Query: 294 EML 296
ML
Sbjct: 767 AML 769
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 40/287 (13%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP TYSIL+ +G L F +L+ V+ + N LL+ +C A + EA
Sbjct: 91 TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150
Query: 101 ML-REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM------------------- 140
+L + M +G PD SY+ + FC +L M
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210
Query: 141 ----------KRYNLV---------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
K YNL PNV TY +I LCK + V+ A + +MI++G
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN ++ + + +R++ M+ + PD +TY +L L GR A +
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++SM ++G P+V+ Y +++HG KG L E +MV+ G+ P
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGY-ATKGALSEMHDLLNLMVENGLSP 376
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN-----------IDEAHGMLR 103
G +G L +A KLFD +L P ++A N LL A+ + + + M+R
Sbjct: 26 GSLG-LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR 84
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E +I PD +YSI I FC + F + + N N +++ LC +
Sbjct: 85 EC-TIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAK 143
Query: 164 KVEEAYQLL-DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE---NVMPDR 219
++ EA +L M E G PD SYN +L C+ AL L+ M + P+
Sbjct: 144 RLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNV 203
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+Y +V+ G+ D+A ++ M RG P+V TY+ ++ GLCK + ++ A F+
Sbjct: 204 VSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ-VVDRAEGVFQ 262
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLG 304
M+D+G+ P + T L + + +G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIG 287
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP + + LLH C+ + A+ F + ++ TP V TYS ++ GL
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ +I +N +L + K +DEA + + + S + + +++I
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A ++ + ++ Y LVP+VFTY I L + +EE L M + G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ NA++ R ++ A + ++ ++N + T M++ LL R
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR 775
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P ++ + L+ C +K A F+ P V T+SILV G G + EA+
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ M+++ D++ ++SL++ C +++A + M G + SY+I I+ F
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + ++ M + P+V TY+ +I LCK+ ++ A +L+DEM RG PD
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+IL C + V+ A+ L+T++ + + PD +TY +++K L + G+ + A +V+E
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +G+ V Y+VM+ G C KG +EA M + G P + T E++
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFC-DKGLFDEALALLSKMEENGCIPDAKTYEII 654
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 137/256 (53%), Gaps = 1/256 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ IKP + L+ C V A F+ H T V++Y+I++ G +
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EM ++ D++ ++SL++ +CK+G I A ++ EM G +PD +Y+
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L +K + P++ TY +++ LC++ K+E+A ++ ++++ +G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D ++Y ++ CD+ + AL L+++M + +PD TY +++ L D A
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668
Query: 240 EVWESMEKRGFYPSVS 255
++ M RG +++
Sbjct: 669 KLLREMIMRGLLVALT 684
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 145/297 (48%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P L + C + + A F D F +Y L+ GL VGE A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + D++ +N++++ MCK ++++A + E S PD F+Y+ I
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + + + M N++P+V+T++ ++ CK+ ++EA +L M+++ PD
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ +C EVN A + M+ V + +YN+++ ++ D A ++++
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M + +P V TYS ++ GLC K G++ A + + M G P Y+S ++ L
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLC-KSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 7/303 (2%)
Query: 11 YDLDQ-----LLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ LDQ L++ LCK K A + N P V Y+ ++ G+ +++A
Sbjct: 294 FHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAF 353
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ E + ++ D+ +N+L+ C G + +A + +M S PD +++SI + F
Sbjct: 354 DLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGF 413
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ +I VL M + ++ P+V TY+ ++ C +V +A + + M RG +
Sbjct: 414 CKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANV 473
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN ++ C V+ A++L M + + PD TY+ ++ L + GR A E+ +
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG P + TY+ ++ LCKK +++A + +GI P +T +L L G
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKH-HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592
Query: 305 FLD 307
L+
Sbjct: 593 KLE 595
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 1/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M I P +Y L+ CK ++K A K P V TYS L+ G V E
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A +F+ M R ++ ++N ++ CK +DEA + +EM PD +YS
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ I ++D M P++ TYN I+ LCK V++A LL ++ +G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ C ++ A ++ + + D + Y ++++ G FD A
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ ME+ G P TY +++ L +K
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEK 661
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 5/264 (1%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K+ + P T + ++G G++ +A D+++ +D +++ +L+ +CK G
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A +LR +PD Y+ I C+ ++ F + + P+VFTYN +I
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
C K+++A L ++M + PD ++++ ++ C + A ++ M K+++
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TY+ ++ V ++A ++ +M RG +V +Y++M++G CK K ++EA K
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK-MVDEAMK 494
Query: 277 YFEMMVDEGIPP----YSSTVEML 296
F+ M + I P YSS ++ L
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGL 518
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+ ++ + +++ CK K V A + F H + P V TYS L+ GL G +S A
Sbjct: 468 GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA 527
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L DEM R DI+ +NS+L+A+CK ++D+A +L +++ G PD +Y+I +
Sbjct: 528 LELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587
Query: 124 FCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C++ + +V + + K YNL +V+ Y +I+ C +EA LL +M E G
Sbjct: 588 LCQSGKLEDARKVFEDLLVKGYNL--DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCI 645
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
PD +Y I+ ++ E +MA +L+ M ++ T ++V +LVR
Sbjct: 646 PDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL-TDDLVASILVR 694
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 44/95 (46%)
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
++++ G PD + + C + +++ AL ++ D+ +Y ++ L +VG
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
A E+ + + P V Y+ ++ G+CK K
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDK 347
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 3/304 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G ++ + +++ C+ ++ A + + F P T++ L+R L G + +A
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLI--SGMPFPPDTFTFNPLIRALCVRGRVPDA 181
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+FD+ML R C ++ ++ LL+A CKA +A +L EMR+ G EPD +Y++ I+A
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C D+ +L + + P+ TY +++ LC +E+ +E +L EM PD
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E ++N I+ C + V+ A++++ M++ +PD TY+ +L L VGR D A E+
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ G P Y+ ++ GLC + + E A + MV PP T + L
Sbjct: 362 RLKSYGCKPDTIAYTTVLKGLCSIE-QWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420
Query: 304 GFLD 307
G +D
Sbjct: 421 GLVD 424
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP +L +LC + K + F + A ++ P T++ +V L G + A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ D M E C DI+ ++S+L+ +C G +D+A +L ++S G +PD +Y+ +
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C ++ M + P+ T+N +I LC+ V+ A +++++M E G NPD
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+I+ C+ ++ A+ L++ + PD T+N +LK L V R++ A ++
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMV 501
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M P +T++ ++ LC +KG L +A + ++M + G P ST ++ + L+
Sbjct: 502 NMMHSDCPPDATTFNTVITSLC-QKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKA 560
Query: 304 G 304
G
Sbjct: 561 G 561
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 2/303 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P I + L++A+C V A D H P TY+ +++ L E
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEV 286
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF EM KC D + N+++ ++C+ G +D A ++ M G PD +YS +
Sbjct: 287 EELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDG 346
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + +L +K Y P+ Y +++ LC E+ E A +L+ EM+ PD
Sbjct: 347 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPD 406
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E ++N ++A C + V+ A++++ +M++ PD TYN ++ L D A E+
Sbjct: 407 EVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLS 466
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+++ G P + T++ ++ GLC + E+A + M+ PP ++T + L
Sbjct: 467 NLQSYGCKPDIVTFNTLLKGLCSVD-RWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQK 525
Query: 304 GFL 306
G L
Sbjct: 526 GLL 528
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 4/297 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G P I +L LC V A + K + P Y+ +++GL + +
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L EM+ CP D + N+++ ++C+ G +D A ++ +M G PD +Y+
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C I +L +++ Y P++ T+N +++ LC ++ E+A QL+ M+
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ C + + A+ + M + +P++ TYN+V+ L++ G+ A
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M P + TY+ ++ + K GK+EEA +MV G+ P + T L
Sbjct: 568 KLLSGMTNG--TPDLITYNTVISNI-TKAGKMEEALDLLRVMVSNGLSPDTITYRSL 621
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G PS+ LL A CK + A D + + P + TY++L+ + + G+
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + ++ C D + + +L+++C + E + EM S PD +++
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C+ + +V+D M + +P++ TY+ I+ LC +V++A +LL + G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +L C + A L+ M + PD T+N V+ L + G DRA
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+V E M + G P + TY+ ++ GLC ++
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNER 456
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 23/308 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G P I + ++ LC + + A + N + + P + T++ L++GL V
Sbjct: 433 MSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L M+ CP D N+++ ++C+ G + +A L+ M G P+ +Y+I
Sbjct: 493 WEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNI 552
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A ++L M N P++ TYN +I + K K+EEA LL M+ G
Sbjct: 553 VVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNG 610
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ C + A+R++ R+ + PD YN +L + R D A
Sbjct: 611 LSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAI 670
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M G P STY +++ L +E ++DE + L
Sbjct: 671 DCFAHMVSSGCMPDESTYIILLEAL------------AYECLLDEA--------KQLLVN 710
Query: 300 LVGLGFLD 307
L LG LD
Sbjct: 711 LCSLGVLD 718
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 12/254 (4%)
Query: 59 ELSEARKLFDEMLER----KC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
E+ +A L D + KC P+ ++ N L++ +C G + +A R ++GA
Sbjct: 73 EIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAE---RVFATLGASAT 129
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+Y+ ++ +C A I R++ M P+ FT+N +IR LC +V +A + D
Sbjct: 130 VVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFD 186
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+M+ RG +P +Y+ +L C + A+ L+ M + PD TYN+++ + G
Sbjct: 187 DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEG 246
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
D A + + G P TY+ ++ LC + + +E + F M P T
Sbjct: 247 DVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSE-RWKEVEELFAEMASNKCAPDEVTF 305
Query: 294 EMLRNRLVGLGFLD 307
+ L G +D
Sbjct: 306 NTIVTSLCQQGLVD 319
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 161/311 (51%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV I P+ + L+ C+ ++V A + F+ + + P V TY+ L+ GL G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L D+M +++ +N+L+ CK + EA ML ++ G P+ +++
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ +A + F + M + PNV TYNC+I C+ V+EA +L EM G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + E A+RL+ M + + P TYN ++ R G A
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V MEK+G ++ TY+V++ G C KGKLEEA + M+++G+ P +T ++LR+
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFC-NKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 588
Query: 300 LVGLGFLDIIE 310
++ GF+ I+
Sbjct: 589 MMEKGFIPDID 599
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 155/303 (51%), Gaps = 2/303 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
++G + S + +L +L K + V + + + V T+ +++ GL VG+
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A + ++M ++ +N++++ CKAG + +A +L+EM + P+ +++I I
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC ++ + +V + M+R L PNV TYN +I LC N K++EA L D+M G
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +YNA++ C + + A ++ + K + P+ T+N ++ + GR D A +
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M G P+VSTY+ ++ G C ++G ++EA K + M G+ T +L + L
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFC-REGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485
Query: 302 GLG 304
G
Sbjct: 486 KKG 488
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 23/340 (6%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD----NAKHEFTPTVKTYSIL-------- 50
EFG ++ +LLH L K+ D NA + + + S+L
Sbjct: 100 EFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANS 159
Query: 51 ------VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
V GE+ A + FD + + L+ N +L ++ K G I + +E
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219
Query: 105 M--RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
M R IG + ++ + I+ C+ V++ MK + P+V TYN II CK
Sbjct: 220 MIRRRIGV--NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
K+ +A LL EM+ + +P+E ++N ++ C V A ++ M ++ + P+ TY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ L G+ D A + + M G P+V TY+ +++G CKKK L+EA + + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK-MLKEAREMLDDIG 396
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
G+ P T L + G +D +L M + C
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ PS + L+ + + A K + TY++L++G + G+
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
L EA +L +EMLE+ + ++ L + M + G I + G L
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 149/286 (52%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSE 62
G P+ + L+ A C+ + A + + E P + T++ +V GL G +
Sbjct: 40 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEG 99
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
ARK+FDEM+ D++++N+LL CK G + E+ + EM G PD +++ IH
Sbjct: 100 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 159
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+A ++ ++ M+ L N T+ +I CK +++A ++EM + G P
Sbjct: 160 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 219
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YNA++ +C +++A LI M + V PD TY+ ++ +VG D A ++
Sbjct: 220 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 279
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M K+G P TYS ++ GLC++K +L +AC+ FE M+ G+ P
Sbjct: 280 QKMLKKGVLPDAITYSSLIRGLCEEK-RLNDACELFENMLQLGVQP 324
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 162/299 (54%), Gaps = 2/299 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E KP++ + +++ LCK ++ A + FD E P V +Y+ L+ G VG L
Sbjct: 74 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 133
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E+ +F EM +R D++ SL+ A CKAGN+++A ++ +MR G + +++ I
Sbjct: 134 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 193
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ + ++ M++ + P+V YN +I CK +++ A +L+ EM +
Sbjct: 194 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 253
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y+ I++ +C ++ A +L +M K+ V+PD TY+ +++ L R + A E+
Sbjct: 254 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 313
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+E+M + G P TY+ ++ G C K+G +E+A + M+ +G+ P T +L N L
Sbjct: 314 FENMLQLGVQPDEFTYTTLIDGHC-KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----------------------------HQF 32
M + G+ P + L+HA CK +++ A F
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 33 FDNA--------KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
D+A K P+V Y+ L+ G +G + AR+L EM ++ D++ +++
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ CK GN+D A + ++M G PDA +YS I CE ++ + ++M +
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+ FTY +I CK VE+A L DEMI +G PD +Y+ ++ A A
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Query: 205 RLITRMTKENVMPDRHTYN---------------MVLKLLVRVGRFDRATEVWESMEKRG 249
RL+ ++ E+ +PD Y+ +LK G A +V++SM R
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
+ S YS+++HG C + G + +A + + M+ G P S ST+ ++R
Sbjct: 442 WKLDGSVYSILIHGHC-RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 490
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 130/241 (53%), Gaps = 2/241 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
++ +N L+ A+C G ++EA G++ +MR G P+A +Y+ + AFC A ++ RV+
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68
Query: 138 DSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
M+ N PN+ T+N ++ LCK ++E A ++ DEM+ G PD SYN +L+ +C
Sbjct: 69 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
++ +L + + MT+ ++PD T+ ++ + G ++A + M +RG + T
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++ ++ G C KKG L++A E M GI P L N LG +D+ L +M
Sbjct: 189 FTALIDGFC-KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 317 E 317
E
Sbjct: 248 E 248
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 41/300 (13%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+H P V TY+ILVR L G L EA + +M C + + +N+L+ A C+AG +D
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62
Query: 97 EA------------------------HGMLREMRSIGAE------------PDAFSYSIF 120
A +G+ + R GA PD SY+
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +C+ +H V M + LVP+V T+ +I CK +E+A L+ +M ERG
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+E ++ A++ C + ++ AL + M K + P YN ++ ++GR D A E
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ ME + P V TYS ++ G C K G L+ A + + M+ +G+ P YSS + L
Sbjct: 243 LIREMEAKRVKPDVVTYSTIISGYC-KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 5/218 (2%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P+ ++Y+I + A C + V+ M+ PN TYN ++ C+ +++ A
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 169 YQLLDEMIERG-ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
+++ M E G A P+ ++N+++ C + A ++ M +E + PD +YN +L
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+VG + V+ M +RG P V T++ ++H CK G LE+A M + G+
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA-GNLEQAVALVAQMRERGLR 183
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
T L + GFLD + ++M + C IQ
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRK---CGIQ 218
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 3/182 (1%)
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M R+ + PNV+TYN ++R LC ++EEA ++ +M G P+ +YN ++A C E
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 200 VNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++ A R+++ M +E N P+ T+N ++ L + GR + A +V++ M + G P V +Y+
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
++ G C K G L E+ F M G+ P T L + G L+ + ++A E
Sbjct: 121 TLLSGYC-KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 318 RS 319
R
Sbjct: 180 RG 181
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 16/233 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ CK +V+ A D + P V TYS+L+ GL
Sbjct: 317 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------LEAMCKAGNIDEAHGMLRE 104
EA +L ++ D + +++L L+ C G + EA + +
Sbjct: 377 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 436
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M + D YSI IH C ++ M R PN + ++R L +
Sbjct: 437 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 496
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
V EA + +++ D + A++ + V+ + ++ M ++ ++P
Sbjct: 497 VVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 4/306 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
G++P + L+ C + V A + + + P V TY+ L+ G G L +
Sbjct: 143 GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEK 202
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A K+ M RKC +++ ++SLL +CKAG++D+A + R M S G P+ +Y+ IH
Sbjct: 203 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 262
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C A+ + + ++D M P+ +YN ++ C+ ++EEA QL EM + P
Sbjct: 263 GLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP 322
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
D +Y ++ C+ + + A L+ M T + PD TY++V+ R RF A E
Sbjct: 323 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 382
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M R P+ TYS ++ GLC K G+++ A + + MV++ + P T + L
Sbjct: 383 IQEMIARNVAPNAVTYSSLIDGLC-KAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALC 441
Query: 302 GLGFLD 307
LG +D
Sbjct: 442 RLGDMD 447
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 3/276 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P++ LLH LCK + A F + P V TY+ L+ GL ++ AR L
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEM CP D +++N+LL+ C+ G I+EA + +EM + PD +Y+ + FC
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336
Query: 127 ANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A+ + +L++MK + P+V TY+ ++ + ++ EA + + EMI R P+
Sbjct: 337 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 396
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y++++ C V+ A+ ++ M + V P T+N V+ L R+G D A ++ +M
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 456
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
G P + TY+ ++ G + G++E A + FE+M
Sbjct: 457 AAHGLEPGMVTYTTLLEGF-SRTGRMEIAYELFEVM 491
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 153/287 (53%), Gaps = 6/287 (2%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
E PTV T++I++ G +L +A F++M E P + +N ++ +CKA +A
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNE-RTYNVVVNGLCKARLTSKA 60
Query: 99 HGMLREMR-SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCII 156
+ +L+EMR PD +YS I+ FC+ ++ +L M R + P+V TY ++
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR-MTKENV 215
LC++ K++ A +++ EM +G PD+++++A++ C+ +V+ AL+L +T +
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD TY ++ + G ++A ++ ME R P+V TYS ++HGLC K G L++A
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC-KAGDLDQAL 239
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
F M +G P T L + L +D +L D+M +T C
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT-ATCC 285
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 162/337 (48%), Gaps = 12/337 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P++ ++ CK +K A F+ + P +TY+++V GL S+A ++
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 67 FDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYSIFIHAF 124
EM + K D++ +++++ CK G +D A +LREM + G PD +Y+ +
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPD 183
C + ++ MK + P+ FT++ +I C KV+EA +L E++ + PD
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ C + A++++ M +P+ TY+ +L L + G D+A +++
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P+V TY+ ++HGLC K++ A + M PP + + L + L
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAH-KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 304 GFLDIIEILADKMERST--------SCTIQELANAMR 332
G ++ + L +M + +C ++ NA R
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR 339
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 11/278 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M G P++ L+H LC V A D P +Y+ L+ G +G
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYS 118
+ EA++LF EM + C D + + L+ C A ++EA +L M++ G +PD +YS
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + + A + M N+ PN TY+ +I LCK +V+ A ++L M+ +
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P ++N+++ C +++ A +L+ M + P TY +L+ R GR + A
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484
Query: 239 TEVWESME--------KRGFYPSVSTYSVMVHGLCKKK 268
E++E M P +S ++ GLCK +
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAR 521
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 9/244 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+ C ++ A +N K P V TYSI+V G EA + EM+ R
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+ + ++SL++ +CKAG +D A +L+ M + EP +++ I A C D+
Sbjct: 390 NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP-------DEWS 186
+++L +M + L P + TY ++ + ++E AY+L + M ++ E +
Sbjct: 450 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA 509
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
++A++ C E++ A+ ++ + P ++ L+R GR + A ++ S+
Sbjct: 510 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 569
Query: 247 KRGF 250
K G
Sbjct: 570 KVGL 573
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV ++PS+ + ++ ALC+ + A + A H P + TY+ L+ G G
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 60 LSEARKLFDEMLERKCP-------VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
+ A +LF+ M ++ V A ++L+ +CKA ID+A ++ E+RS EP
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ A ++++S+ + L
Sbjct: 541 AEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 158/307 (51%), Gaps = 6/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P Y + +++ +CK + A +F +K+ V TY+IL+R L + G+
Sbjct: 242 MLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK 301
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
KL +ML + C + + +++L+ A+C+ G IDEA +L+ M+ PD +SY
Sbjct: 302 WEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + LD M +P++ +YN I+ LCKN +EA + +++ E G
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN + + AL +I M + PD TYN ++ L R G D+A
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAI 481
Query: 240 EVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+ M E P+V +Y+ ++ GLCK + ++ +A + MV+EG P +T +L
Sbjct: 482 ELLVDMFESEKCQPTVISYNTVLLGLCKVQ-RIIDAIEVLAAMVNEGCLPNETTYTLL-- 538
Query: 299 RLVGLGF 305
+ G+GF
Sbjct: 539 -IQGIGF 544
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP ++ + ++ CK V A + D K F P V TY+IL+ G L A +
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ D++L+ C ++ + L+EA G IDEA +L EM S G PD ++Y++ ++ C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + F L + + V V TYN ++R L K E +L+ +M+ +G P+
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+ ++ C +++ A ++ M ++ + PD ++Y+ ++ L R G+ D A E + M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G P + +Y+ ++ LC K G +EA FE + + G PP + + L L G
Sbjct: 383 ISGGHLPDILSYNSILASLC-KNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P V + L++G ++ ++ +A ++ E+LE+ D+ A+N+++ CKA +D A
Sbjct: 108 YKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHAS 166
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+L M+ G EPD +Y+I I FC + RV+D + + N P V TY +I
Sbjct: 167 KVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEAT 226
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
++EA +LLDEM+ RG PD ++YN ++ C ++ A ++R++K +
Sbjct: 227 ITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGV 286
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TYN++L+ L+ G+++ ++ M +G P+ TYS ++ LC + GK++EA +
Sbjct: 287 STYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALC-RDGKIDEAKNVLK 345
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILAD 314
+M ++ + P + + L + L G +D+ IE L D
Sbjct: 346 VMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDD 381
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 158/317 (49%), Gaps = 1/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + + ++ LL L + K K A F+ + FTP ++TY++L+ G + L
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNL 388
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA + ++EM+++ DI+AH+++LE + K +A + M++ G P+ +Y+I
Sbjct: 389 VEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTIL 448
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + D M P+ Y C+I +K+++ Y LL EM E+G
Sbjct: 449 IRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGC 508
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
D +YNA++ +R + A+R+ +M + + HTYNM++K ++
Sbjct: 509 PADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCA 568
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VWE M ++G P ++Y V + GL + G+ EEAC+Y E M+++G+
Sbjct: 569 VWEEMGRKGCCPDDNSYIVFIGGLI-RHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADF 627
Query: 301 VGLGFLDIIEILADKME 317
G DI+E LA KM+
Sbjct: 628 SRAGKPDILEELARKMK 644
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M++ G KP I +L L K K A + F+ K + +P V+TY+IL+R L +
Sbjct: 398 MIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMK 457
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + FDEM++ C D + L+ +D+ + +L+EM+ G D +Y+
Sbjct: 458 MQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNA 517
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I R+ M + + + TYN +++ E + +EM +G
Sbjct: 518 LIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKG 577
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ SY + A R + M ++ + + YN R G+ D
Sbjct: 578 CCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILE 637
Query: 240 EVWESMEKRGFY 251
E+ M+ G +
Sbjct: 638 ELARKMKFEGKF 649
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 6/224 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+N+++ + + + GML EM G ++SI I AF A + V + M
Sbjct: 271 TYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELM 329
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
KRYN V T NC++ L + + +EA L +++ +R P+ +Y +L C +
Sbjct: 330 KRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKNL 388
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A R M + PD ++ +L+ L++ + A +++E M+ +G P+V TY+++
Sbjct: 389 VEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTIL 448
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ LCK+ K++EA +YF+ MVD G P ++ L + G G
Sbjct: 449 IRDLCKQM-KMQEAVEYFDEMVDSGCQPDAAVYTCL---ITGFG 488
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 25/238 (10%)
Query: 55 GDVGELSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGA 110
GD E++ E + R C V ++ A + +EA+ N+D +H ++ + R A
Sbjct: 189 GDFDEVNVNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHA 248
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
AF + FC A ++ N TYN ++ L + + E
Sbjct: 249 RKPAFRF------FCWAG------------QKAGFTHNSRTYNAMMSVLGRTRQFESMMG 290
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+L EM E+G E +++ + E A+ + M + N T N +L L
Sbjct: 291 MLGEMGEKGLLTME-TFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLG 349
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R A ++E +E R F P++ TY+V+++G C+ K L EA + + M+D+G P
Sbjct: 350 RAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIK-NLVEAGRTWNEMIDKGFKP 405
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 3/327 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT-YSILVRGLGDVGE 59
M++ G +P++ LL LCK +K A F + P Y++L+ G G+
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF+EMLE+ C + +NSLL + G + ++M G P+ F+++
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ D+ R+ M+ P+V +YN +IR +C K EA +LL EMI G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ + ++ A++L + K + PD +Y+ ++ L R G+ A
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V++ M G P + +V GLC+ + +L E+C+ F+ MV P +L +
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGE-RLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 300 LVGLGFL-DIIEILADKMERSTSCTIQ 325
L D+ EI + ER S ++
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVE 438
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 149/296 (50%), Gaps = 6/296 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M G P+++ L+ LC+ + V A + + + H+ P V TY L+ GL +
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ--PNVVTYGSLLSGLCKM 135
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L EA LF M+ R CP D + +N L++ K G++ EA+ + EM G P F+Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + F + V + M R VPN+FT+N ++ CK + EA++L EM
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD SYN ++ C + + + A RL+ M + V PD +YN+++ + G D
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
A +++ + K G P +YS ++ LC + GK+ A F+ M+ G P ++ V
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLC-RAGKVGAAFVVFKDMIANGSAPDAAVV 370
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P+++ + LL ++ +V F D + P + T++ L+ G +G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF EM CP D++++N+L+ MC G EA +LREM G PD SY+I
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++ + ++ + + L P+ F+Y+ II LC+ KV A+ + +MI G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ PD ++ C + + L M K +P YN+++ L + R D
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
E++ + +RGF P V V++ L
Sbjct: 423 EIFHELTERGFSPDVEISKVILETL 447
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+Y+ L+ L G +++ML C + + LL ++C+A +EA + R M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G P+ FSYSI I C + +L+ M PNV TY ++ LCK K+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+EA L M+ RG PD YN ++ + ++ A RL M ++ +P TYN +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L R G F R +++ M ++G P++ T++ ++ G C K G + EA + F M G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC-KMGDMVEAHRLFLEMRSLG 257
Query: 286 IPP 288
PP
Sbjct: 258 CPP 260
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L++N LLE + K+G D +G +M + G P+ ++Y + + C+A V
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M PNVF+Y+ +I LC+ +KV+EA +LL+EMI+ G P+ +Y ++L+ C +
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ A+ L +RM PD YN+++ + G A ++E M ++G P+V TY+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
++ G +KG+ F+ M+ +G P T L + +G D++E
Sbjct: 198 LLSGF-SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG--DMVE 245
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TY L+R L EAR +F M + C ++ +++ L+ +C+ +DEA
Sbjct: 49 VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAE 108
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L EM G +P+ +Y + C+ + + M P+ YN +I
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + EAY+L +EM+E+G P ++YN++L+ + E L M ++ +P+
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
T+N +L ++G A ++ M G P V +Y+ ++ G+C KGK EA +
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC-SKGKPHEAQRLLRE 287
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+ G+ P + +L + G LD
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALD 314
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G P+I+ + LL CK + AH+ F + P V +Y+ L+RG+ G+
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA++L EM+ DI+++N L++ K+G +D A + E+ G EPDAFSYS
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A + + F V M P+ ++ LC+ E++ E+ +L M++
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P YN ++ C + + +T+ PD ++L+ L R
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 169/312 (54%), Gaps = 4/312 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE + P++ + L+ K ++ + + F + P V +Y+ L+ GL + G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA + D+M+ +++ +N+L+ CK + EA M ++ GA P Y++
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ I F + + M+R +VP+V TYNC+I LC+N +E A +L D++ +G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++ ++ +C + E A L+ M+K + P TYN+V+K + G AT
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 240 EVWESMEK-RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ MEK R +V++Y+V++ G +KGKLE+A M+++G+ P T E+++
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGY-SQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 299 RLVGLGFLDIIE 310
+V GF+ IE
Sbjct: 585 EMVDQGFVPDIE 596
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 151/288 (52%), Gaps = 5/288 (1%)
Query: 4 FGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+G K S L+ AL K + V + + + + + P V T+++++ L G++++
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGN---IDEAHGMLREMRSIGAEPDAFSYSI 119
AR + ++M C +++++N+L++ CK G + +A +L+EM P+ +++I
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + +++ +V M ++ PNV +YN +I LC K+ EA + D+M+ G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ C + AL + + + +P YNM++ ++G+ D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ E ME+ G P V TY+ ++ GLC + G +E A K F+ + +G+P
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLC-RNGNIEAAKKLFDQLTSKGLP 468
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+ L+ A+ K + + +EM +P+ F++++ I+A C+ ++ V++
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248
Query: 140 MKRYNLVPNVFTYNCIIRKLCK---NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
MK Y PNV +YN +I CK N K+ +A +L EM+E +P+ ++N ++
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ ++++ M ++V P+ +YN ++ L G+ A + + M G P++ T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
Y+ +++G CK L+EA F + +G P + ML + LG +D L ++M
Sbjct: 369 YNALINGFCKND-MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 317 ER 318
ER
Sbjct: 428 ER 429
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + A S + A + N V V M R + PNVFT+N +I LCK K+ +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHC---DRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++++M G +P+ SYN ++ +C ++ A ++ M + +V P+ T+N++
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + + +V++ M + P+V +Y+ +++GLC GK+ EA + MV G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC-NGGKISEAISMRDKMVSAG 361
Query: 286 IPPYSSTVEMLRN 298
+ P T L N
Sbjct: 362 VQPNLITYNALIN 374
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M + G+KP + ++ CK ++K A + E V +Y++L++G G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
+L +A L +EMLE+ + + + + E M G + + G L
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 161/306 (52%), Gaps = 4/306 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + +L L ++ ++ A + F P TYSI++ G VG ++
Sbjct: 217 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARC 276
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L++EM E++ D+L N++++ +CKA +D+AH +L EM IGA PD +Y+I +
Sbjct: 277 LELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ N + + +M P++ +Y+ ++ LCK KV +A L D MIER PD
Sbjct: 337 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ C +++ A L+ M++ NV+PD T ++ L R R D A +++
Sbjct: 397 VVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV--DEGIPPYSSTVEMLRNRLV 301
M ++G V +++++ GLC ++GKL +A +F+ MV D P T L N L+
Sbjct: 457 YMVEKGTVADVLPHNIVLAGLC-REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALI 515
Query: 302 GLGFLD 307
G +D
Sbjct: 516 EAGRVD 521
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G + + L++ LCK ++++ A++ + A + P TY+ ++ GL +G+
Sbjct: 71 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR--EMRSIGAEPDAFSY 117
+SEA++ FD M R D++A+N LL+A+ K G + EA G+ + +M PD +Y
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I FC ++ + +P+ TYN I+ L + ++EA ++ +M++
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ +Y+ +L+ HC + L L MT++ PD N V+ +L + + D
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A +V E M K G P V TY++++ GLCK +++A + F MVD G P + ++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTN-LVDKAHELFSTMVDNGCAPDIVSYSVVL 369
Query: 298 NRLVGLGFLDIIEILADKM 316
N L + +L D+M
Sbjct: 370 NGLCKTNKVHDARVLFDRM 388
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 151/299 (50%), Gaps = 4/299 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGELS 61
G P + + LL AL K V A F D A + P + TY+ L+ G V +
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA KLF +++ + D + +NS+L + + N+DEA M ++M G P+ +YSI +
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C ++ + + M P+V N +I LCK +KV++A+++L+EM + GA
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN +L C V+ A L + M PD +Y++VL L + + A +
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M +R P V T+++++ GLC K GKL+EA ++M + + P T L + L
Sbjct: 385 FDRMIERKLVPDVVTFNILMDGLC-KAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGL 442
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 139/263 (52%), Gaps = 3/263 (1%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A+ F P V TYS ++ GL G+++EA ++ +EM E+ D+ + +++ +C+AG +
Sbjct: 2 AEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKV 61
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
DEA + +M G + +Y+ I+ C+ +I +++L+ M P+ TYN I
Sbjct: 62 DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR--MTKE 213
+ LC+ KV EA Q D M RG +PD +YN +L +V A L M
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V PD TYN ++ RV + D A ++++ + +G+ P TY+ ++ GL +K ++E
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS-NMDE 240
Query: 274 ACKYFEMMVDEGIPPYSSTVEML 296
A + F+ MVD G P +T ++
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIV 263
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 147/288 (51%), Gaps = 4/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E P + + ++ LCK K V AH+ + +K P V TY+IL+ GL
Sbjct: 283 MTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 342
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +LF M++ C DI++++ +L +CK + +A + M PD +++I
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + +LD M +N++P+ T ++ LC++++ +EA +L M+E+G
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN--VMPDRHTYNMVLKLLVRVGRFDR 237
D +N +LA C ++ AL M K + PD TY ++ L+ GR D+
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A + ++ M G P Y+ +++GL +K+G+ +A + + M ++G
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGL-RKQGRHIQADRLTQAMKEKG 569
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + + LL LCK V AH+ F + P + +YS+++ GL +
Sbjct: 318 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 377
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR LFD M+ERK D++ N L++ +CKAG +DEA +L M PD + +
Sbjct: 378 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTT 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C R+ M V +V +N ++ LC+ K+ +A M++
Sbjct: 438 LMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSD 497
Query: 180 A--NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+PD +Y ++ + V+ A+ +MT PD YN ++ L + GR +
Sbjct: 498 GEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQ 557
Query: 238 ATEVWESMEKRGF 250
A + ++M+++GF
Sbjct: 558 ADRLTQAMKEKGF 570
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 3/225 (1%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M E+ D++ +++++ +CK G + EA M+ EM G PD +Y+I + C A
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ + M N YN +I LCK+E +E AY+LL+EM +G PD +YN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME--K 247
IL+ C +V+ A + M PD YN +L L + G+ A ++++M+
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
R P + TY+ ++ G C+ + K +EA K F+ ++ +G P + T
Sbjct: 181 RKVAPDLITYNTLIDGFCRVE-KTDEAMKLFKDVIAKGYMPDTVT 224
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDV 57
MVE G + + +L LC+ + A FF + + EF+P V TY+ LV L +
Sbjct: 458 MVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEA 517
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
G + +A F +M C D +A+N+L+ + K G +A + + M+ G D F
Sbjct: 518 GRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M E + P L+H LC+ K A + F + T V ++I++ GL G+
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482
Query: 60 LSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L++A F M++ + D++ + +L+ A+ +AG +D+A ++M G PD +Y
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAY 542
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
+ ++ + R+ +MK + + F
Sbjct: 543 NTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 163/317 (51%), Gaps = 8/317 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P I L+ LL ALCK V+ A F K++ P TY+IL G V S ++
Sbjct: 345 QPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMRV 404
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYSIFIHA 123
+EM+E D +N+ +++ CKAG + EA + MR+ G+ P A +Y+I I A
Sbjct: 405 LEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILA 464
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+++ F+++ M ++P+V TY +I +C KVEEAY+ L+EM +G PD
Sbjct: 465 LVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPD 524
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L C+ + AL L RM + +P HT+NM++ + +G D A E W
Sbjct: 525 IVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWH 584
Query: 244 SMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M+KRG TY VM+ GL C K+E+AC + ++++GI + +L
Sbjct: 585 EMDKRGCARDTDTYCVMIEGLFNCN---KMEDACFLLDEVINKGIKLPYRKFDCFLMQLS 641
Query: 302 GLGFLDIIEILADKMER 318
+G L I L++ M +
Sbjct: 642 MIGDLQAIHKLSEHMRK 658
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 10/257 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE----FTPTVKTYSILVRGLGD 56
M+E G P + + + + CK V A + F+ + + +PT KTY+I++ L
Sbjct: 408 MIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQ 467
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
E KL +M+ D+ + ++E MC AG ++EA+ L EM + G PD +
Sbjct: 468 SDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVT 527
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ F+ CE + M VP+V T+N +I + + + A++ EM
Sbjct: 528 YNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMD 587
Query: 177 ERGANPDEWSYNAILA--YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+RG D +Y ++ ++C++ E A L+ + + + ++ L L +G
Sbjct: 588 KRGCARDTDTYCVMIEGLFNCNKMED--ACFLLDEVINKGIKLPYRKFDCFLMQLSMIGD 645
Query: 235 FDRATEVWESMEKRGFY 251
++ E M K FY
Sbjct: 646 LQAIHKLSEHMRK--FY 660
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 38/184 (20%)
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAY-------------------------------- 169
R P + N ++ LCK VE+A
Sbjct: 341 RVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSR 400
Query: 170 --QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVM--PDRHTYNM 224
++L+EMIE G PD ++YN + C V A L M TK + M P TY +
Sbjct: 401 GMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAI 460
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ LV+ R + ++ + M G P VSTY ++ G+C GK+EEA K+ E M ++
Sbjct: 461 MILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMC-LAGKVEEAYKFLEEMGNK 519
Query: 285 GIPP 288
G P
Sbjct: 520 GYRP 523
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 175/339 (51%), Gaps = 12/339 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G ++Y+ + LL LC+ K + ++ P V +Y+ ++RG + E
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +L +EM C ++ L++A CKAG +DEA G L+EM+ +G E D Y+
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ ++ + D + P TYN +IR CK +++EA ++ + MIERG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y ++ C + AL+L+ M +++ P+ TYN+++ L + G A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV------DEGIPPYSSTV 293
E+ E M+KR P TY++++ GLC KG L+EA K +M+ D + Y++ +
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 294 EML--RNRLVGLGFLDIIEILADKMERSTSCTIQELANA 330
L NRL LDI ++L +K+ T L N+
Sbjct: 432 HGLCKENRLHQA--LDIYDLLVEKLGAGDRVTTNILLNS 468
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 164/371 (44%), Gaps = 46/371 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G++P++Y L+ LC K A Q + + + P TY+I++ L G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSY 117
+++A ++ + M +R+ D + +N LL +C G++DEA +L M S +PD SY
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 118 SIFIHAFCEANDIHSVFRVLD-----------------------------------SMKR 142
+ IH C+ N +H + D +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+V N TY +I CK + A LL +M P + YN +L+ C ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A RL M ++N PD ++N+++ ++ G A + M + G P + TYS +++
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADK--- 315
K G L+EA +F+ MVD G P + + + + G D +++ L DK
Sbjct: 608 RFLKL-GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Query: 316 MERSTSCTIQE 326
+++ +CT+ +
Sbjct: 667 LDKELTCTVMD 677
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 39/354 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
++E G P + L+ CK +K A + F+ + P V TY+ L+ GL VG+
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+E+ + + +N ++ +CK G + +A ++ M+ PD +Y+I
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV--PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ C D+ ++L M + + P+V +YN +I LCK ++ +A + D ++E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 178 RGANPDE----------------------W-------------SYNAILAYHCDRAEVNM 202
+ D W +Y A++ C +N+
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L+ +M + P YN +L L + G D+A ++E M++ +P V ++++M+
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G K G ++ A M G+ P T L NR + LG+LD DKM
Sbjct: 573 G-SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 135/273 (49%), Gaps = 5/273 (1%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + +MLE ++ ++ + LLE + A G+L M G + ++++I +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + +L M+R +L+P+VF+YN +IR C+ +++E+A +L +EM G +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ C +++ A+ + M + D Y +++ G DR ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ + +RG P TY+ ++ G C K G+L+EA + FE M++ G+ P T L + L G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFC-KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 303 LG----FLDIIEILADKMERSTSCTIQELANAM 331
+G L ++ ++ +K E + T + N +
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ CK + VA + E P+V Y+ L+ L G L +A +LF+EM
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D+++ N +++ KAG+I A +L M G PD F+YS I+ F + +
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
D M P+ + +++ + ++ +L+ +++++ D+ ++ Y
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 195 CD-RAEVNMALRLITRMTKE 213
C+ A +++A RL+ R+T +
Sbjct: 680 CNSSANMDLAKRLL-RVTDD 698
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+ E ++P Y + L+ LC R A D + P V TY+IL+
Sbjct: 149 VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL DEM ++ C DI+ +N ++ +C+ G +D+A L+ + S G EP+ SY+I
Sbjct: 209 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A ++ M + PNV T+N +I LC+ VE A ++L+++ + G
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN +L C + +++ A+ + M PD +YN +L L R G D A
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ ++ +G P + +Y+ ++ GL K GK +EA + MV +G+ P
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGL-TKAGKTKEALELLNEMVSKGLQP 436
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 150/293 (51%), Gaps = 7/293 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P + + ++ C + A + A+ P TY+ L+RGL G + A +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLV--AEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
DEML R+C D++ + LLEA CK +A +L EMR G PD +Y++ ++ C+
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ L ++ Y PN +YN +++ LC E+ E+A +L+ EM ++G P+ ++
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++++ C + V AL ++ ++ K P+ +YN +L + + D+A + M
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
RG YP + +Y+ ++ LC + G+++ A + + D+G P Y++ ++ L
Sbjct: 362 RGCYPDIVSYNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +++ +C+ V A +F N + P +Y+I+++GL
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ CP +++ N L+ +C+ G ++ A +L ++ G P++ SY+
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ + LD M P++ +YN ++ LC++ +V+ A +LL ++ ++G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN ++ + AL L+ M + + PD TY+ + L R R + A
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++ G P+ Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLFAYMIGNGCMPNESTYTIL--- 514
Query: 300 LVGLGFLDIIE 310
+ GL + +I+
Sbjct: 515 IEGLAYEGLIK 525
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCP 76
L +L +R + A + +A+ P T + L++ L G +EAR++ C
Sbjct: 72 LRSLVRRGELDEALRLVGSARR---PDAGTCAALIKKLSASGRTAEARRVL-----AACG 123
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
D++A+N+++ C AG +D A ++ EM EPDA++Y+ I C + V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
LD M R VP+V TY ++ CK ++A +LLDEM ++G PD +YN ++ C
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
V+ A+ + + P+ +YN+VLK L R++ A E+ M ++G P+V T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+++++ LC +KG +E A + E + G P S
Sbjct: 301 FNMLISFLC-RKGLVEPALEVLEQIPKYGCTPNS 333
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P++ + L+ LC++ V+ A + + K+ TP +Y+ L+ +
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A D M+ R C DI+++N+LL A+C++G +D A +L +++ G P SY+
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M L P++ TY+ I LC+ +++E+A + ++ + G
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YNAI+ C R E + A+ L M MP+ TY ++++ L G A
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528
Query: 240 EVWESMEKRGF 250
++ + + RG
Sbjct: 529 DLLDELCSRGV 539
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G +P Y + ++ L K+ ++ A + + F P V TY+IL+ G G
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ + M + ++ + +N L+ A+CK GNI+EA + EM G +PD ++++
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + + M ++ N TYN ++ + +++A++L+DEM+ RG
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C V L L M + + P + N+++ L R G+ + A
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M RG P + TY+ +++GLC K G ++EA F + EGI P + T L +R
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLC-KMGHVQEASNLFNKLQSEGIRPDAITYNTLISR 666
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 169/420 (40%), Gaps = 104/420 (24%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M + G P+ L+HALC+ V A Q ++ P V+T++ ++ GL G
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE--------------- 104
+ EA KL D ML R D L + L+ +C+ G +DEA +L +
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISG 350
Query: 105 -----------------MRSIGAEPDAF-------------------------------- 115
M G EPDA+
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410
Query: 116 ---SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+Y+I I+ FC+ + +++SM L N YNC+I LCK+ +EEA QL
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470
Query: 173 DEMIERGANPDEWSYNAILAYHCD-----------------------------------R 197
EM +G PD +++N+++ C R
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A +L+ M D TYN ++K L + G ++ ++E M +G +P++ +
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
++++ GLC + GK+ +A K+ + M+ G+ P T L N L +G + L +K++
Sbjct: 591 NILISGLC-RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 7/302 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++Y ++ ALC V A D AKH P Y L+ L +
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +L ++M C D+ N ++ +C+AG I EA +L M G DA +Y
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-DEMIER 178
+H C + +L+ + PN YN +I + + EEA LL + M+
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +++N ++ + + AL L+ M + P+ TY +++ + GR + A
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+ SM +G + Y+ ++ LC K G +EEA + F M +G P T L N
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICALC-KDGNIEEALQLFGEMSGKGCKPDIYTFNSLIN 490
Query: 299 RL 300
L
Sbjct: 491 GL 492
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP IY + L++ LCK ++ A + + E TY+ LV + +A
Sbjct: 477 GCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQA 536
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL DEML R CP+D + +N L++A+CK G +++ G+ EM G P S +I I
Sbjct: 537 FKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISG 596
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C ++ + L M L P++ TYN +I LCK V+EA L +++ G PD
Sbjct: 597 LCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPD 656
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
+YN +++ HC N A L+ + +P+ T+++++ +V+
Sbjct: 657 AITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 9/275 (3%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
LD L+ C R V F+D +PTV T+ ++++ L V E+ A L +M +
Sbjct: 177 LDILVDGDCPRVAPNV---FYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAK 233
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
C + + + +L+ A+C+ + EA +L +M + EPD +++ IH C A IH
Sbjct: 234 HGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHE 293
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
++LD M + TY ++ LC+ +V+EA LL+++ NP+ YN +++
Sbjct: 294 AAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLIS 349
Query: 193 YHCDRAEVNMALRLI-TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+ A L+ M PD +T+N+++ LV+ G A E+ M + F
Sbjct: 350 GYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE 409
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
P+V TY+++++G C K+G+LEEA + M +G+
Sbjct: 410 PNVITYTILINGFC-KQGRLEEAAEIVNSMSAKGL 443
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 7/262 (2%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ ++++ G G +A +L +M C ++N +L+ + A + +M
Sbjct: 137 FILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDM 196
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P +++ + + A C +++ S +L M ++ VPN Y +I LC+N +V
Sbjct: 197 LSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRV 256
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA QLL++M PD ++N ++ C ++ A +L+ RM D TY +
Sbjct: 257 SEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYL 316
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK-YFEMMVDE 284
+ L R+G+ D A + + P+ Y+ ++ G G+ EEA + MV
Sbjct: 317 MHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYV-ASGRFEEAKDLLYNNMVIA 371
Query: 285 GIPPYSSTVEMLRNRLVGLGFL 306
G P + T ++ + LV G+L
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYL 393
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++Y + ++ LCK V A + + P Y+ L+ G +G + A
Sbjct: 40 GLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAA 99
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEM +++ D +A+ +++ +C+ G + EA + +M S G EPD +Y+ I
Sbjct: 100 YKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDG 159
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ ++ F + + M + L PNV TY + LCK +V+ A +LL EM +G +
Sbjct: 160 YCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLN 219
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C + A++L+ M + PD T+ ++ + G +A E+
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLR 279
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M RG P+V T++V+++G C G LE+ + M+++GI P ++T L
Sbjct: 280 EMLDRGLQPTVITFNVLMNGFC-MSGMLEDGERLLAWMLEKGIMPNTTTYNSL 331
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 152/293 (51%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V +YS ++ G GEL + KL EM + ++ +NS++ +CK+G +D+A +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LREM + G PD Y+ I FC+ +I + +++ D M++ +VP+ Y +I LC+
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K+ EA ++ ++M RG PDE +Y ++ +C E+ A L +M + + P+ T
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y + L ++G+ D A E+ M +G ++ TY+ +V+GLC K G + +A K E M
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC-KSGNIRQAVKLMEEM 246
Query: 282 VDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
G+ P + T L + G + E+L + ++R T+ M G
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 1/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P L+ CK ++ A + + TP V TY+ L GL +G+
Sbjct: 141 MFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L EM + ++I +NSL+ +CK+GNI +A ++ EM G PD +++
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+C+ ++ +L M L P V T+N ++ C + +E+ +LL M+E+G
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C R + + M VMPD +TYN+++K + A
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW 380
Query: 240 EVWESMEKRGFYPSVSTYS 258
+ + M ++GF + S+Y+
Sbjct: 381 FLHKEMAEKGFNLTASSYN 399
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M+ G PD SYS I+ +C ++ V +++ M+ L PN++TYN II LCK+ K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
V++A ++L EMI +G PD Y ++ C + A +L M K+ ++PD Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
V+ L R G+ A +V+ M RG P TY+ ++ G C K G++E+A MV
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYC-KSGEMEKAFSLHNQMVQS 179
Query: 285 GIPPYSSTVEMLRNRLVGLGFLD----IIEILADKMERSTSCTIQELANAMRGKTGFRKS 340
G+ P T L + L LG +D ++ + K + CT L N + R++
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Query: 341 RSEETELE 348
E+E
Sbjct: 240 VKLMEEME 247
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CK +++ A++ FD K P Y+ ++ GL G+
Sbjct: 71 MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+F++M R D + + +L++ CK+G +++A + +M G P+ +Y+
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ + + +L M L N+ TYN ++ LCK+ + +A +L++EM G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ +C E+ A L+ M + P T+N+++ G +
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M ++G P+ +TY+ ++ C + + + ++ M G+ P S+T +L
Sbjct: 311 RLLAWMLEKGIMPNTTTYNSLMKQYCIRN-NMRCTTEIYKGMCARGVMPDSNTYNIL 366
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 36/209 (17%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P L+ A CK + AH+ + PTV T+++L+ G G L +
Sbjct: 250 GMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDG 309
Query: 64 RKLFDEMLER----------------------KCPVDIL-------------AHNSLLEA 88
+L MLE+ +C +I +N L++
Sbjct: 310 ERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKG 369
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
CKA N+ EA + +EM G A SY+ I F + I + + M+R + +
Sbjct: 370 HCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAAD 429
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
YN + +E A +L DE IE
Sbjct: 430 AEIYNLFVDISYGEGNMETALELCDEAIE 458
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 170/312 (54%), Gaps = 4/312 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE + P++ + L+ K ++ + + F + + P V TY+ L+ GL + G+
Sbjct: 287 MVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGK 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA + D+M+ +++ ++SL+ CK G + EA M ++ G P Y++
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNM 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ I F + + M+R +VP+V TYNC+I LC+N +E A +L D++ +G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++ ++ +C R E A L+ M+K + P TYN+++K + G AT
Sbjct: 467 L-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAAT 525
Query: 240 EVWESMEK-RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ MEK R +V++Y+V++ G +KGKLE+A M+++G+ P T E+++
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGY-SQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 299 RLVGLGFLDIIE 310
+V GF+ IE
Sbjct: 585 EMVDKGFVPDIE 596
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 152/288 (52%), Gaps = 5/288 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+G K S L+ AL K+ + V + + + + + P V T+++++ L G++++
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGN---IDEAHGMLREMRSIGAEPDAFSYSI 119
AR + ++M +++++N+L++ CK G + +A +L+EM P+ +++I
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + +++ +V M +++PNV TYN +I LC K+ EA + D+M+ G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y++++ C + AL + + + P YNM++ ++G+ D
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ E ME+ G P V TY+ ++ GLC + G +E A K F+ + ++G+P
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLC-RNGNIEAAKKLFDQLTNKGLP 468
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A+ K + + +EM +P+ F++++ I+A C+ ++ V++ MK Y
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 145 LVPNVFTYNCIIRKLCK---NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
PNV +YN +I CK N K+ +A +L EM+E +P+ ++N ++ +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+L++ M ++V+P+ TYN ++ L G+ + A + + M G P++ TY ++
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+G C K G ++EA F+ + +G P + ML + LG +D L ++MER
Sbjct: 374 NGFC-KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + A S + A + N V + M R + PNVFT+N +I LCK K+ +A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHC---DRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++++M G +P+ SYN ++ +C ++ A ++ M + V P+ T+N++
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + + +V++ M + P+V TY+ +++GLC GK+ EA + MV G
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLC-NGGKINEAIGMRDKMVSAG 361
Query: 286 IPPYSSTVEMLRNRLVGLGF----LDIIEILADKMERSTSCTIQELANA 330
+ P T L N G LD+ + + + R T+ L +A
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M + G+KP + ++ CK ++K A + E V +Y++L++G G
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
+L +A L +EMLE+ + + + + E M G + + G L
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHL 599
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 144/292 (49%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P LL LC K + A H D+ P V +YSI++ G
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ + LF EM++R P D++ + ++++ +CKA D A G+ ++M G +P+ ++
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + V ++L+ M L P+ +TY ++ LCKN + EA D MI
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G P +Y ++ + + ++ + M + + PD H +N+ + G D
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A +++ M + G P+V Y ++ LC K G++++A F M++EG+ P
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALC-KLGRVDDAEVKFNQMINEGVTP 442
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 3/322 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP Y LL+ LCK + A FFD+ + P V TY IL+ G G LSE
Sbjct: 299 GLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEM 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D M+E D N A K G ID+A + +MR G P+ +Y I A
Sbjct: 359 HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M + PN+ +N ++ LC +K E A +L+ EM+++G P+
Sbjct: 419 LCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N ++ C+ V RLI M V PD +Y ++ GR D A +V++
Sbjct: 479 AVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFD 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P+ TY+ ++HG C ++++A F M+ +G+ P T + + L
Sbjct: 539 GMVSIGLSPTEVTYNTLLHGYCSAS-RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 597
Query: 304 G-FLDIIEILADKMERSTSCTI 324
F + E+ + + T C I
Sbjct: 598 KRFSEAKELYLNMINSGTKCDI 619
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 159/332 (47%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + L+ ALCK V A F+ +E TP + ++ LV GL V +
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L EML++ + + N+L+ +C G + E ++ M +G PDAFSY+
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C +V D M L P TYN ++ C ++++AY L EM+ +G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN IL + A L M D +TYN++L L + D A
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S+ +G ++ T+++M+ L K G+ E+A F + G+ P T ++
Sbjct: 640 KMFQSLCSKGLQLNIITFTIMIGALL-KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 698
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L+ G L+ + L ME++ + ++ NA+
Sbjct: 699 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 730
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P + + A K + A F+ + H +P V Y L+ L +G
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ +I+ NSL+ +C + A ++ EM G P+A ++
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + R++D M+ + P+ F+Y +I C + +EA ++ D M+ G
Sbjct: 485 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P E +YN +L +C + ++ A L M ++ V P TYN +L L + RF A
Sbjct: 545 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E++ +M G + TY+++++GLCK ++EA K F+ + +G+
Sbjct: 605 ELYLNMINSGTKCDIYTYNIILNGLCKSNC-VDEAFKMFQSLCSKGL 650
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 5/260 (1%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P + TYSIL+ +G L F +L+ +D +A N LL+ +C + EA
Sbjct: 87 APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146
Query: 101 -MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK---RYNLVPNVFTYNCII 156
+L+ M +G PD SY+I + C +L M PNV +Y+ +I
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVI 206
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+V++ Y L EMI+RG PD +Y ++ C + A + +M
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ +TYN ++ + +G++ ++ E M RG P TY +++ LC K G+ EA
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLC-KNGRCREARF 325
Query: 277 YFEMMVDEGIPPYSSTVEML 296
+F+ M+ +GI P ST +L
Sbjct: 326 FFDSMIRKGIKPKVSTYGIL 345
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I + L++ LC + A + ++ P ++ L+ L +VG
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E R+L D M D ++ L+ C G DEA + M SIG P +Y+
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C A+ I + + M R + P V TYN I+ L + ++ EA +L MI G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMT-----------------------KENVM 216
D ++YN IL C V+ A ++ + KE+ M
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674
Query: 217 ------------PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
P+ TY +V + L+ G + ++ +MEK G P+ + +V L
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+G + A Y + + +ST +L
Sbjct: 735 L-HRGDISRAGAYLSKLDERNFSVEASTTSLL 765
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 18/280 (6%)
Query: 52 RGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG-------NIDEAHGMLRE 104
R LG L +A KLFDE+L P + A N LL A+ +A + + M+RE
Sbjct: 26 RSLG----LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRE 81
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
S P+ +YSI I FC + F + + + N +++ LC ++
Sbjct: 82 C-SDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKR 140
Query: 165 VEEAYQ-LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN---VMPDRH 220
V EA LL M E G PD SY +L C+ AL L+ M ++ P+
Sbjct: 141 VGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV 200
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+Y++V+ G+ D+ ++ M RG P V TY+ ++ GLCK + + A F+
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQ-LFDRAEGVFQQ 259
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
M+D G P + T L + + +G + +++++L + R
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P+ + LLH C + A+ F + + TP V TY+ ++ GL
Sbjct: 540 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ DI +N +L +CK+ +DEA M + + S G + + +++I
Sbjct: 600 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVPNV TY + L + +EE L M + G
Sbjct: 660 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
P+ NA++ R +++ A ++++ + N + T ++++ +
Sbjct: 720 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFT 770
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P + L+ C A + FD +PT TY+ L+ G
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF EML + ++ +N++L + + EA + M + G + D ++Y+I
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C++N + F++ S+ L N+ T+ +I L K + E+A L + G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y + + + L + M K P+ N +++ L+ G RA
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 744
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+++R F ST S+++
Sbjct: 745 AYLSKLDERNFSVEASTTSLLM 766
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 165/331 (49%), Gaps = 37/331 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+K ++ + ++ +LCK K V A++ + + +P V T+S L+ G VG+L EA
Sbjct: 204 VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF 263
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM------------------- 105
LF EM+ + D N L++A+CK GN+ A ML M
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323
Query: 106 ----------------RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
+GA P+A SY I+ FC+ + + + M+ + P+
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDK 383
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TYN +I LCK+ ++ A++L+DEM + G + ++YN ++ C V+ A+ L+ +
Sbjct: 384 VTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ + + PD +T+N+++ L +VGR A +V++ + +G+ + TY++MV+GLC K+G
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLC-KEG 502
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+EA M D GI P + T E L L
Sbjct: 503 LFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 151/317 (47%), Gaps = 3/317 (0%)
Query: 2 VEF-GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+EF GI P I+ + L++ C + A K + P T++ L++GL G+
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA D +L +D ++ +L+ +CK G A MLR++ + + Y+
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + + + M + P+V T++ +I C ++EEA+ L EM+ +
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +++N ++ C + A ++ M KE VMP+ TY+ ++ V + ++A
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V ++ + G P+ +Y M++G CK K ++EA F M +GI P T L +
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIK-MVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392
Query: 300 LVGLGFLDIIEILADKM 316
L G + L D+M
Sbjct: 393 LCKSGRISYAWELVDEM 409
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 169/350 (48%), Gaps = 11/350 (3%)
Query: 11 YDLDQ-----LLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEAR 64
+ LDQ L++ LCK + A Q + V Y+ ++ L + +A
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L+ +M+ +K D++ ++L+ C G ++EA G+ REM PD ++++I + A
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++ +L M + ++PNV TY+ ++ C +V +A +L+ + + GA P+
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNA 348
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SY ++ C V+ AL L M + + PD+ TYN ++ L + GR A E+ +
Sbjct: 349 HSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE 408
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G ++ TY+ ++ LCK +++A + + D+GI P T +L L +G
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNH-HVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG 467
Query: 305 FL----DIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
L D+ + L K + T + N + + F ++ + ++++ +
Sbjct: 468 RLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDN 517
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P++ L+ C V K H ++ P +Y ++ G +
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF++M + D + +NSL++ +CK+G I A ++ EM G + F+Y+
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + ++ +K + P+++T+N +I LCK +++ A + +++ +G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ + W+YN ++ C + A L+++M ++PD TY +++ L ++A
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVH 262
++ M R ++ +++H
Sbjct: 544 KLLREMIARDVVYALEGLEMVLH 566
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 123/250 (49%), Gaps = 8/250 (3%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
+ G P+ + +++ CK K V A F++ + + P TY+ L+ GL G +S
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +L DEM + P +I +N L++A+CK ++D+A ++++++ G +PD ++++I I
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ + + V + N +TYN ++ LCK +EA LL +M + G
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y ++ + E A +L+ M +V+ MVL L + +
Sbjct: 521 PDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLHL-------ESEAKD 573
Query: 242 WESMEKRGFY 251
E K+G+Y
Sbjct: 574 QEKFGKKGYY 583
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK--NEKVEEAYQLLDEMIERGANPDEWS 186
D+ +V + + R ++ +N I+ L K N A L + G PD ++
Sbjct: 46 DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFT 105
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N ++ +C AE+N A ++ ++ K PD T+N ++K L G+ A + +
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165
Query: 247 KRGFYPSVSTYSVMVHGLCK 266
GF+ +Y +++GLCK
Sbjct: 166 ALGFHLDQFSYGTLINGLCK 185
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + L+H LCK + A Q + ++ P V TY+ L+ GL + EAR+L
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ M++RK +++ +N+L+ CK G AH ++ M G PD +++ I FC+
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ I VL MK+ PN+ TYN +I LC + EA +LL EM RG PD +
Sbjct: 291 KSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIIT 350
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN+++ C ++ A ++ M + V+PD +Y + L++ RFD A + ++M
Sbjct: 351 YNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMF 410
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
G P++ T++ ++ GLC + +L+EA +M G P +ST E+L L G +
Sbjct: 411 DAGAIPNLFTFNSLMEGLCCSR-RLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRV 469
Query: 307 D 307
D
Sbjct: 470 D 470
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 2/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E GI P + + L+ LCK ++ A Q + K + P + TY+ L+ G G
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L + M++ D++ NSL+ C+ ID+A +L M+ P+ +Y++
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + +L M ++P++ TYN +I C+N ++E+A+Q+ + M+ERG
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SY + + A L+ M +P+ T+N +++ L R D A
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + G P+ STY V+V GLCK G++++A + MMV EGI P S+ + +
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKA-GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497
Query: 300 LVGLGFLDI 308
L G D+
Sbjct: 498 LAREGKQDL 506
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 39/292 (13%)
Query: 46 TYSILVRGLGDVGELSEARKLF-DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
T + L+R L +A ++F DE+L + C + + +N+L+ CKAG+++ A +L E
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 105 MRSIGAEPDAFSYS---------------------------------IFIHAFCEANDIH 131
M+ G PD ++S I +H C+AN +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLS 190
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
++++ M +VP+V TYN +I LCK+ ++EEA QLL+ M++R P+ +YN ++
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLI 250
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C +A +LI RM + PD T+N ++ + + D+A EV M+K
Sbjct: 251 YGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCA 310
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
P++ TY+V++ GLC G+ EAC+ M GI P T N L+G+
Sbjct: 311 PNLVTYNVLISGLC-DAGRANEACELLSEMDGRGILPDIITY----NSLIGI 357
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 145/283 (51%), Gaps = 2/283 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ ++P++ + L++ CK +AHQ + T P V T++ L+ G +
Sbjct: 234 MVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSK 293
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++ M + C +++ +N L+ +C AG +EA +L EM G PD +Y+
Sbjct: 294 IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNS 353
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC I F++ + M ++P+ +Y + L K+E+ +EA+ LLD M + G
Sbjct: 354 LIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAG 413
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A P+ +++N+++ C ++ A L+ M + P TY +++ L + GR D A
Sbjct: 414 AIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAK 473
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
EV M G P VS+ +VH L ++GK + A YF+ +V
Sbjct: 474 EVLVMMVSEGIQPLVSSSGTIVHTL-AREGKQDLALHYFDQVV 515
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-DEMIERGANPDEWSYNAILA 192
FR + R + N FT NC++R L K + +AYQ+ DE++ + + + +YN ++
Sbjct: 54 FRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIG 113
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW-ESMEKRGFY 251
C ++ A +L+ M + PD T++ +++ L G RA + + ES+E
Sbjct: 114 GFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE---CA 170
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
P ++++VHGLCK +L EA + E M + GI P Y+S ++ L
Sbjct: 171 PDSVLFNILVHGLCKAN-QLSEARQMIEEMSERGIVPDVVTYNSLIDGL 218
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P I + L+ C+ ++ A Q + + P +Y L L EA
Sbjct: 343 GILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEA 402
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M + ++ NSL+E +C + +DEA +L MR +G +P A +Y + +
Sbjct: 403 FALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTG 462
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A + VL M + P V + I+ L + K + A D+++ +
Sbjct: 463 LCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKAC 522
Query: 184 EWSYNAILAY 193
+ SY +L +
Sbjct: 523 DPSYQKLLEF 532
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 154/314 (49%), Gaps = 3/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P+ Y ++ CK V A + FD K E P Y+ L+ G D G+L
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A D M+ER + + +N L+ A+ G EA+ ++ EM G PD F+Y+I I+
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ + ++M R + V TY +I L K +V+E +L DE + RG P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ H ++ A ++ M K+ + PD TYN +++ L +GR D A ++
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M KRG P + TY+ ++ G KG +++A + M+++G P T L L
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGY-SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 401
Query: 303 LGFLDIIEILADKM 316
G D E + +M
Sbjct: 402 NGQGDDAENMVKEM 415
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ ++ + L+HAL A++ + P V TY+IL+ G G
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ M R ++ + SL+ A+ K G + E + E G PD Y+
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 289
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ + +I F ++ M++ + P+ TYN ++R LC +V+EA +L+DEM +RG
Sbjct: 290 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 349
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +++ + + +V ALR+ M + P TYN +++ L + G+ D A
Sbjct: 350 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 409
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M + G P STY ++ GL
Sbjct: 410 NMVKEMVENGITPDDSTYISLIEGL 434
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A LF +M + P+ N +L +C AG A +LR+M P+A +Y+
Sbjct: 23 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 78
Query: 121 IHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + ++ M+ R + PN +TY +I CK +V+EA ++ DEM+ +G
Sbjct: 79 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 138
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ YNA++ +CD+ +++ AL RM + V TYN+++ L GR A
Sbjct: 139 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 198
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ E M +G P V TY+++++G C K+G +++A + FE M G+
Sbjct: 199 YELVEEMGGKGLAPDVFTYNILINGHC-KEGNVKKALEIFENMSRRGV 245
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H A F + M R L T+N ++R LC K A +LL +M
Sbjct: 13 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----P 68
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++A C R V AL ++ M + + P+++TY V+ +VGR D A
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 240 EVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V++ M +G P Y+ ++ G C +GKL+ A Y + MV+ G+ +T +L
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLL 185
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N +L + C + AL L+ +M + N + TYN V+ GR A ++ M
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 98
Query: 246 EKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGL 303
+RG P+ TY ++ G C K G+++EA K F+ M+ +G + P + L
Sbjct: 99 RERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157
Query: 304 GFLDIIEILADKM-ERSTSCTI 324
G LD + D+M ER + T+
Sbjct: 158 GKLDTALLYRDRMVERGVAMTV 179
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 159/312 (50%), Gaps = 3/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + ++ + C R + +A + F+ K PTV TY+IL+ G + A
Sbjct: 168 GFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVA 227
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL DEML + D L +N+++ MCK +D+A +LR + S G +PD +Y+I +
Sbjct: 228 MKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRT 287
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+++ M PNV T++ +I LC++ KVEEA LL M E+G PD
Sbjct: 288 LLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPD 347
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y+ ++A C +++A + M + +PD YN ++ L R G+ D+A EV+E
Sbjct: 348 AYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFE 407
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+++ G P+VS+Y+ + L G A + ++++GI P T L + L
Sbjct: 408 KLDEVGCPPNVSSYNTLFSALW-SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRD 466
Query: 304 GFLD-IIEILAD 314
G +D IE+L D
Sbjct: 467 GMVDEAIELLVD 478
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 157/306 (51%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P + ++ +CK V A + + + P + TY+IL+R L G+
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SE KL EM+ C +++ H+ L+ +C+ G ++EA +LR M+ G +PDA+ Y
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + L+ M +P++ YN I+ LC+ K ++A ++ +++ E G
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN + + + AL +I ++ + + PD TYN ++ L R G D A
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M+ + P+V +Y++++ GLCK + +A + M ++G P +T +L
Sbjct: 474 ELLVDMQSGRYRPNVVSYNIILLGLCKVN-RANDAIEVLAAMTEKGCQPNETTYILL--- 529
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 530 IEGIGF 535
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G P + +L+ +++ A + + + P V Y+ L+ G +L
Sbjct: 95 MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQL 154
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ D M R D++ +N ++ + C G +D A + E+ EP +Y+I
Sbjct: 155 ENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTIL 214
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A I ++LD M L P+ TYN IIR +CK V++A++LL + RG
Sbjct: 215 IEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGC 274
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN +L R + + +LI+ M P+ T+++++ L R G+ + A
Sbjct: 275 KPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVN 334
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ SM+++G P Y ++ G C ++G+L+ A ++ E M+ +G P
Sbjct: 335 LLRSMKEKGLKPDAYCYDPLIAGFC-REGRLDLATEFLEYMISDGCLP 381
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
LL C+AG +E+ L M G PD + I F + +I RV++ ++RY
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+VF YN +I K ++E A ++LD M RG PD +YN ++ C R ++++AL
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ + K+N P TY ++++ + G D A ++ + M +G P TY+ ++ G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
CK+ +++A + + G P T +L L+ G
Sbjct: 254 CKEM-MVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRG 292
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G KP++ L+ LC+ V+ A + K + P Y L+ G G
Sbjct: 304 MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + + M+ C DI+ +N+++ +C+ G D+A + ++ +G P+ SY+
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
A + D + ++ + + P+ TYN +I LC++ V+EA +LL +M
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN IL C N A+ ++ MT++ P+ TY ++++ + G A
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAM 543
Query: 240 EVWESM 245
E+ S+
Sbjct: 544 ELANSL 549
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
++ + C+ K E+ L+ M+++G PD ++ + + A R++ + +
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD YN ++ ++ + + A V + M+ RGF P V TY++M+ C + GKL+ A
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR-GKLDLA 192
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ FE ++ + P T +L + G +D+ L D+M
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM 234
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+ E ++P Y + L+ LC R A D + P V TY+IL+
Sbjct: 23 VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 82
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL DEM ++ C DI+ +N ++ +C+ G +D+A L+ + S G EP+ SY+I
Sbjct: 83 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 142
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A ++ M + PNV T+N +I LC+ VE A ++L+++ + G
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN +L C + +++ A+ + M PD +YN +L L R G D A
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ ++ +G P + +Y+ ++ GL K GK +EA + MV +G+ P
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGL-TKAGKTKEALELLNEMVSKGLQP 310
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 155/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +++ +C+ V A +F N + P +Y+I+++GL
Sbjct: 93 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ CP +++ N L+ +C+ G ++ A +L ++ G P++ SY+
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ + LD M P++ +YN ++ LC++ +V+ A +LL ++ ++G
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN ++ + AL L+ M + + PD TY+ + L R R + A
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++ G P+ Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 333 RAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLFAYMIGNGCMPNESTYTILIEG 391
Query: 300 LVGLGFLDIIEILADKM 316
L G + L D++
Sbjct: 392 LAYEGLIKEARDLLDEL 408
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 37/287 (12%)
Query: 46 TYSILVRGLGDVGELSEARKL--------------------------------FDEMLER 73
Y+ +V G G+L AR+L DEML R
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 61
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+C D++ + LLEA CK +A +L EMR G PD +Y++ ++ C+ +
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
L ++ Y PN +YN +++ LC E+ E+A +L+ EM ++G P+ ++N ++++
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + V AL ++ ++ K P+ +YN +L + + D+A + M RG YP
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 241
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ +Y+ ++ LC + G+++ A + + D+G P Y++ ++ L
Sbjct: 242 IVSYNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
+A+N+++ C AG +D A ++ EM EPDA++Y+ I C + VLD
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M R VP+V TY ++ CK ++A +LLDEM ++G PD +YN ++ C
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V+ A+ + + P+ +YN+VLK L R++ A E+ M ++G P+V T+++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
++ LC +KG +E A + E + G P S
Sbjct: 178 LISFLC-RKGLVEPALEVLEQIPKYGCTPNS 207
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 71/355 (20%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P Y + L++ LCK HVK A + D E + P V TY+ ++ GL +GE+ EA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR-------------------- 103
++ D+M+ R C + + +N+L+ +CK ++EA + R
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 104 ---------------EMRSIGAEPDAFSYSIFIHA------------------------- 123
EMRS G EPD F+Y++ I +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 124 ----------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
FC+AN + D M+ + + N TYN +I LCK+ +VE+A QL+D
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+MI G PD+++YN++L + C ++ A ++ MT PD TY ++ L + G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R + A+++ S++ +G + Y+ ++ GL +K+ E + EM+ PP
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 155/283 (54%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +GIKP + + L+ ALC+ ++ A D + P KT++ +++G + G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
L A ++ ++M+E C ++ N ++ CK G +++A ++EM + G PD ++++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++ C+A + ++D M + P+V+TYN +I LCK +V+EA ++LD+MI R
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P+ +YN +++ C +V A L +T + ++PD T+N +++ L A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E++E M +G P TY++++ LC KGKL+EA + M
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLC-SKGKLDEALNMLKQM 461
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
MVEFG S ++ ++H CK V+ A F ++ F P T++ LV GL G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A ++ D ML+ D+ +NS++ +CK G + EA +L +M + P+ +Y+
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ N + + + ++P+V T+N +I+ LC A +L +EM +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE++YN ++ C + +++ AL ++ +M TYN ++ + + A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+++ ME G + TY+ ++ GLCK + ++E+A + + M+ EG P
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDAAQLMDQMIMEGQKP 538
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 145/325 (44%), Gaps = 40/325 (12%)
Query: 15 QLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+LL +L + A + F+ A K F+P Y ++ LG G + +K+ ++M
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 73 RKCPV-------------------DILA-----------------HNSLLEAMCKAGNID 96
+C + +IL+ +N +L + ++
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+M G +PD ++++ I A C A+ + +L+ M Y LVP+ T+ ++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-V 215
+ + ++ A ++ ++M+E G + S N I+ C V AL I M+ ++
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD++T+N ++ L + G A E+ + M + G+ P V TY+ ++ GLC K G+++EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-KLGEVKEAV 350
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M+ P + T L + L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTL 375
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRS---------------------------------- 107
+ +L + ++G+ D+ +L +M+S
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 108 --IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G +PD Y+ ++ + N + V M + + P+V T+N +I+ LC+ ++
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
A +L++M G PDE ++ ++ + + +++ ALR+ +M + + N++
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 226 LKLLVRVGRFDRATEVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ + GR + A + M + GF+P T++ +V+GLC K G ++ A + ++M+ E
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC-KAGHVKHAIEIMDVMLQE 324
Query: 285 GIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMERSTS 321
G P T + + L LG + + +E+L + R S
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 159/306 (51%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG + + +L LCK K V++A+ F K +F +Y+++V G +
Sbjct: 162 MHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRT 221
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A ++ EM++R ++ ++N++L+ +AG I+EA EM+ E D +Y+
Sbjct: 222 NKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTV 281
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH F A +I +V D+M + ++P+V TYN I+ LCK + V+ A + +EM+ +G
Sbjct: 282 IHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGY 341
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +YN ++ C R E+ A+ + RM + P+ TYN+V++ G D+A +
Sbjct: 342 VPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALD 401
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLC--KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M P++ TY++++ + KK L A MVD G P T + N
Sbjct: 402 LFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLN 461
Query: 299 RLVGLG 304
L+ G
Sbjct: 462 GLLLTG 467
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 130/255 (50%), Gaps = 2/255 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT KT++I+ G+ A K+F M + C D+ + N++L+ +CK+ ++ A+ +
Sbjct: 134 PTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNL 193
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ + D SY++ ++ +C + +L M + L PN+ +YN +++ +
Sbjct: 194 FKVFKG-KFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFR 252
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ EA+ EM +R D +Y ++ E+ A ++ M K+ V+P T
Sbjct: 253 AGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVAT 312
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN +++L + D A ++E M +G+ P+ TY++++ GLC +G++E A ++ M
Sbjct: 313 YNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLC-HRGEMERAMEFMGRM 371
Query: 282 VDEGIPPYSSTVEML 296
D+G P T ++
Sbjct: 372 KDDGCEPNVQTYNLV 386
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
++ MRS P +++I + A H +V SM ++ ++ ++N I+ LC
Sbjct: 123 LVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLC 182
Query: 161 KNEKVEEAYQL----------------------------------LDEMIERGANPDEWS 186
K+++VE AY L L EM++RG P+ S
Sbjct: 183 KSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTS 242
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L + ++N A M K + D TY V+ G RA +V+++M
Sbjct: 243 YNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMV 302
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K+G PSV+TY+ + LCKK ++ A FE MV +G P S T ++
Sbjct: 303 KKGVLPSVATYNAFIQVLCKKDN-VDNAIVIFEEMVVKGYVPNSITYNLV 351
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 173/341 (50%), Gaps = 8/341 (2%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+QL+H LC+ + A F K + P V TY+ L++GL + +A L DEMLE
Sbjct: 262 NQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLE 320
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
R D++ +NSL+ C+AG++D A+ +L M+ G PD +Y FI C++N +
Sbjct: 321 RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEE 380
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
R+ DS+ + NV Y+ +I CK KV+EA L ++M+ + +P+ +++NA++
Sbjct: 381 ARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIH 440
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + AL L +M K + P +T+N+++ +++ G FD A + + M G P
Sbjct: 441 GLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKP 500
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRNRLVGLGFLDI 308
TY+ + C GK++EA M +EG+PP Y+S ++ + D+
Sbjct: 501 VARTYNAFIEVYC-SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDV 559
Query: 309 IEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELES 349
++ + D + T L + K + +S ET +ES
Sbjct: 560 LKSMFDADCEPSHHTFLSLIKQLFDKR-YVVEKSGETGVES 599
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 163/331 (49%), Gaps = 7/331 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E + IY + +++ CK VK A QF + +P T + + G +
Sbjct: 183 MLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKD 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++F+EM R + +++N L+ +C+AG IDEA + M+ P+ ++Y+
Sbjct: 243 VDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTA 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C N +H +LD M NLVP++ TYN +I C+ ++ AY+LL M ERG
Sbjct: 299 LIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERG 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y + + C V A RL +T+E V + Y++++ +VG+ D A
Sbjct: 358 LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAG 417
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M + P+ T++ ++HGLC G L+EA F+ MV G+ P T +L R
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLC-SAGNLKEALSLFDQMVKMGLKPTVYTFNILIGR 476
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANA 330
++ G D KM S + NA
Sbjct: 477 MLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 150/305 (49%), Gaps = 33/305 (10%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++K Y+ L+ L G + E +L+ EMLE +DI N ++ CK G + EA +
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV---------------- 146
+M G PD F+ + FI +C + D+ S FRV + M N V
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRID 275
Query: 147 ---------------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
PNV+TY +I+ LC+ + V +A LLDEM+ER PD +YN+++
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
A C ++ A RL++ M + ++PD+ TY + L + R + A +++S+ + G
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
+V YSV++ G C K GK++EA FE M+ + P + T L + L G L
Sbjct: 395 ANVIMYSVLIDGYC-KVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453
Query: 312 LADKM 316
L D+M
Sbjct: 454 LFDQM 458
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 158/347 (45%), Gaps = 29/347 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E + P + + L+ C+ H+ A++ K P +TY + L
Sbjct: 318 MLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNR 377
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR+LFD + E +++ ++ L++ CK G +DEA + +M S P+A++++
Sbjct: 378 VEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C A ++ + D M + L P V+T+N +I ++ K ++A++ L +M+ G
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNA + +C +V A ++ +M +E V PD TY ++K ++G A
Sbjct: 498 EKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAF 557
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA------------------------- 274
+V +SM PS T+ ++ L K+ +E++
Sbjct: 558 DVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEF 617
Query: 275 ---CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ FE M G P S E L + + + L I L D+M++
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQK 664
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 31/349 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ P+ Y + L+H LC ++K A FD K PTV T++IL+ + G+
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A K +M+ +N+ +E C AG + EA M+ +M+ G PD F+Y+
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTS 542
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE------------ 167
I A+ + +S F VL SM + P+ T+ +I++L V E
Sbjct: 543 LIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSN 602
Query: 168 -----------------AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+L +EM + G PD Y +++ C + +AL+L+ +M
Sbjct: 603 FGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQM 662
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
KE + P +N V+ ++ ++ A + E M G P + ++ GL ++G+
Sbjct: 663 QKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGL-YEEGE 721
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
E F+ + G ++L + ++ G ++ L ++ME++
Sbjct: 722 TERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKN 770
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 133/332 (40%), Gaps = 31/332 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
MV+ G+KP++Y + L+ + K+ AH+ P +TY+ + G+
Sbjct: 458 MVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGK 517
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + +M E P D + SL++A K G A +L+ M EP ++
Sbjct: 518 VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLS 577
Query: 120 FIHAFCEAN-----------------------------DIHSVFRVLDSMKRYNLVPNVF 150
I + + V + + M+++ P+
Sbjct: 578 LIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSK 637
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
Y +I +CK E + A +LLD+M + G +P E +NA+++ C + A ++ M
Sbjct: 638 CYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
P ++ L G +R V++ + G+ + +++ G+ K+G
Sbjct: 698 ICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGML-KQGL 756
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+EE + FE M G T +L +L G
Sbjct: 757 VEEFSQLFEEMEKNGCNFSPRTYSILTQKLHG 788
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + L+H L A D P + TY +V GL G+
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + K +++ +N++++ +CK ++D+A + +M + G +PD F+Y+
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T+N +I K K+ EA +L DEMI+R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN+++ C ++ A ++ T M ++ +PD TYN ++K + R +
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++ GL + G + A K F+ MV +G+PP T +L +
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLF-QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 475
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ ++ + +++S
Sbjct: 476 LCKYGKLEKALVVFEYLQKS 495
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 157/284 (55%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ ++ + ++ LCK KH+ A F+ + + P V TY+ L+ L + G S+A
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK +++ NSL++A K G + EA + EM +P+ +Y+ I+ F
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ M + +P+V TYN +I+ CK ++VEE +L EM +RG +
Sbjct: 372 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + +MA ++ +M + V PD TY+++L L + G+ ++A V+E
Sbjct: 432 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 491
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++K P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 492 LQKSKMEPNIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 534
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 151/298 (50%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP ++ + L+ LC A + D + + P V T++ L+ G+L EA
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA 345
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEM++R +I+ +NSL+ C +DEA + M S PD +Y+ I
Sbjct: 346 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG 405
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TYN +I+ L + + A ++ +M+ G PD
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 465
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C ++ AL + + K + P+ +TYN++++ + + G+ + +++
Sbjct: 466 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
S+ +G P+V Y+ M+ G C +KG EEA F M ++G P S ++R RL
Sbjct: 526 SLSLKGVKPNVIIYTTMISGFC-RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 582
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI + Y LL+ C+R + +A K + P + T S L+ G
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 166
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA L D+M+E D + N+L+ + EA ++ M + G +PD F+Y
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ DI +L M++ + NV YN II LCK + +++A+ L ++M +G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN++++ C+ + A RL++ M + + P+ T+N ++ + G+ A
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++ M +R P++ TY+ +++G C +L+EA + F +MV + P
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHD-RLDEAQQIFTLMVSKDCLP 394
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 142/282 (50%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P+I + L++ C + A Q F + P V TY+ L++G
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E +LF EM +R + + +N+L++ + +AG+ D A + ++M S G PD +YSI
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + V + +++ + PN++TYN +I +CK KVE+ + L + +G
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y +++ C + A L M ++ +PD YN +++ +R G +
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 591
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+ + M GF ST S++++ L G+LE++ Y EM+
Sbjct: 592 ELIKEMRSCGFVGDASTISMVINML--HDGRLEKS--YLEML 629
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + K P++ +S L+ + + + L ++M P + ++ LL C+
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCR 128
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EPD + S ++ +C I ++D M P+ T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVT 188
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N +I L + K EA L+D M+ RG PD ++Y ++ C R ++++AL L+ +M
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + + YN ++ L + D A +++ ME +G P V TY+ ++ LC G+
Sbjct: 249 KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC-NYGRW 307
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + G L E L D+M +RS I +
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367
Query: 331 MRG 333
+ G
Sbjct: 368 ING 370
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF EM++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I ++ FC + + VL M + P++ T + ++ C +++ EA L+D+M+E
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++N ++ + + A+ LI RM PD TY V+ L + G D A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + MEK +V Y+ ++ GLCK K +++A F M +GI P T L +
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYK-HMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 300 CLCNYGRWSDASRLLSDMIER 320
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 149/286 (52%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSE 62
G P+ + L+ A C+ + A + + E P + T++ +V GL G +
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEG 241
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
ARK+FDEM+ D++++N+LL CK G + E+ + EM G PD +++ IH
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+A ++ ++ M+ L N T+ +I CK +++A ++EM + G P
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YNA++ +C +++A LI M + V PD TY+ ++ +VG D A ++
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 421
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M K+G P TYS ++ GLC++K +L +AC+ FE M+ G+ P
Sbjct: 422 QKMLKKGVLPDAITYSSLIRGLCEEK-RLNDACELFENMLQLGVQP 466
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 162/299 (54%), Gaps = 2/299 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E KP++ + +++ LCK ++ A + FD E P V +Y+ L+ G VG L
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E+ +F EM +R D++ SL+ A CKAGN+++A ++ +MR G + +++ I
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ + ++ M++ + P+V YN +I CK +++ A +L+ EM +
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y+ I++ +C ++ A +L +M K+ V+PD TY+ +++ L R + A E+
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+E+M + G P TY+ ++ G C K+G +E+A + M+ +G+ P T +L N L
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHC-KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 3/279 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P+V Y+ ++ L D L AR+ ML ++ +N L+ A+C G ++EA
Sbjct: 114 YAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRK 158
G++ +MR G P+A +Y+ + AFC A ++ RV+ M+ N PN+ T+N ++
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LCK ++E A ++ DEM+ G PD SYN +L+ +C ++ +L + + MT+ ++PD
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
T+ ++ + G ++A + M +RG + T++ ++ G C KKG L++A
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC-KKGFLDDALLAV 351
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
E M GI P L N LG +D+ L +ME
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----------------------------HQF 32
M + G+ P + L+HA CK +++ A F
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 33 FDNA--------KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
D+A K P+V Y+ L+ G +G + AR+L EM ++ D++ +++
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ CK GN+D A + ++M G PDA +YS I CE ++ + ++M +
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+ FTY +I CK VE+A L DEMI +G PD +Y+ ++ A A
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 205 RLITRMTKENVMPDRHTYN---------------MVLKLLVRVGRFDRATEVWESMEKRG 249
RL+ ++ E+ +PD Y+ +LK G A +V++SM R
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
+ S YS+++HG C + G + +A + + M+ G P S ST+ ++R
Sbjct: 584 WKLDGSVYSILIHGHC-RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 152/333 (45%), Gaps = 43/333 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS+ + +L AL + A +F + +H P V TY+ILVR L G L EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA------------------------H 99
+ +M C + + +N+L+ A C+AG +D A +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 100 GMLREMRSIGAE------------PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
G+ + R GA PD SY+ + +C+ +H V M + LVP
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+V T+ +I CK +E+A L+ +M ERG +E ++ A++ C + ++ AL +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M K + P YN ++ ++GR D A E+ ME + P V TYS ++ G C K
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC-K 410
Query: 268 KGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
G L+ A + + M+ +G+ P YSS + L
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 4/213 (1%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P +Y+ + A +A+ + S R L SM R+ + PNV+TYN ++R LC ++EEA
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLK 227
++ +M G P+ +YN ++A C E++ A R+++ M +E N P+ T+N ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + GR + A +V++ M + G P V +Y+ ++ G C K G L E+ F M G+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC-KVGCLHESLAVFSEMTQRGLV 290
Query: 288 PYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
P T L + G L+ + ++A ER
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 6/248 (2%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
+ A+N++L A+ A ++ A L M G P+ ++Y+I + A C + V+
Sbjct: 118 VPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG-ANPDEWSYNAILAYHCDR 197
M+ PN TYN ++ C+ +++ A +++ M E G A P+ ++N+++ C
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A ++ M +E + PD +YN +L +VG + V+ M +RG P V T+
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ ++H CK G LE+A M + G+ T L + GFLD + ++M
Sbjct: 297 TSLIHATCKA-GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355
Query: 318 RSTSCTIQ 325
+ C IQ
Sbjct: 356 K---CGIQ 360
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 16/233 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ CK +V+ A D + P V TYS+L+ GL
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------LEAMCKAGNIDEAHGMLRE 104
EA +L ++ D + +++L L+ C G + EA + +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M + D YSI IH C ++ M R PN + ++R L +
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
V EA + +++ D + A++ + V+ + ++ M ++ ++P
Sbjct: 639 VVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 10/315 (3%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDE 69
I + LL ALCK V+ A + + P +TY+ILV G V + KL +E
Sbjct: 132 INAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLLEE 191
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYSIFIHAFCE 126
M+E D +N+ ++ CK G I EA + MR+ G+ P A +Y+I I A +
Sbjct: 192 MIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQ 251
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + F+++ M +P+V TY II +C K++EAY+ L+EM + PD +
Sbjct: 252 HDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVT 311
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN L CD + AL+L RM + N +P TYNM++ + + D A E W+ ++
Sbjct: 312 YNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEID 371
Query: 247 KRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIP-PYSSTVEMLRNRLVGL 303
RG P TY VM+ GL C K+E+AC E +++EG+ PY L +L +
Sbjct: 372 NRGCRPDTDTYCVMIEGLFNC---NKMEDACFLLEEVINEGVKLPYKKFDSFLM-QLSVI 427
Query: 304 GFLDIIEILADKMER 318
G L I L++ M++
Sbjct: 428 GDLQAIHRLSEHMKK 442
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P I + L LC K + A + + + P+V+TY++L+ ++ + A +
Sbjct: 306 RPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFE 365
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ E+ R C D + ++E + +++A +L E+ + G + + F+
Sbjct: 366 TWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQLS 425
Query: 126 EANDIHSVFRVLDSMKRY 143
D+ ++ R+ + MK++
Sbjct: 426 VIGDLQAIHRLSEHMKKF 443
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 151/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGE 59
E G P ++ LL +LC + A +P V YS ++ G G+
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D + ++S++ A+CKA +D+A LR+M + G P+ ++Y+
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R++++P+V T + ++ LCK K++EA + D M +G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +SY +L + + + L M + + PD +T+N+++K G D+A
Sbjct: 355 QNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 414
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 462
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 160/344 (46%), Gaps = 39/344 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI P ++HALCK + + A F ++ P TY+ L+ G G+
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM D++ + L+ ++CK G I EA + M G P+ FSY+I
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364
Query: 120 FIHAFCE-------------------ANDIHSVFRVL-----------------DSMKRY 143
++ + A DI++ F VL + M+ +
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT-FNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V TY +I LC+ K+++A + ++MI++G PD+++Y+ ++ C + A
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
LI+ + + D ++ ++ L ++GR A +++ G +P+ YS+++ G
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 544 YC-LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 157/356 (44%), Gaps = 52/356 (14%)
Query: 12 DLDQLLHALCK-------RKHVKVAHQFFDNAKHE------FTPTVKTYSILVRGLGDVG 58
DL+ L AL + R +A F+ A +PT TY+IL+
Sbjct: 66 DLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAH 125
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSY 117
A F ++L V+I+ N LL+ C+A DEA +L +G PD FSY
Sbjct: 126 RPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185
Query: 118 SIFIHAFCEA-------------------------------------NDIHSVFRVLDSM 140
SI + + C+ D++ + M
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEM 245
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + P+ TY+ ++ LCK +++A L +M+ +G P+ W+YN ++ + +
Sbjct: 246 VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQW 305
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+R+ M + +++PD T +M++ L + G+ A +V+++M +G P+V +Y++M
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIM 365
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++G KG L + F++M+ +GI P T +L G LD I+ ++M
Sbjct: 366 LNGY-ATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 132/311 (42%), Gaps = 36/311 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-------------------------- 39
I P + L L+ +LCK +K A FD +
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT 379
Query: 40 ----------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
P + T+++L++ + G L +A +F+EM + D++ + +++ A+
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
C+ G +D+A +M G PD ++Y I FC + ++ + + ++
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
++ II LCK +V +A + D + G +P Y+ ++ +C ++ ALR+
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + P+ Y ++ ++GR D ++ M ++G PS Y++++ GL +
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 270 KLEEACKYFEM 280
+ K+ EM
Sbjct: 620 TVPAKVKFHEM 630
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI+P+ L++ CK + F + + P+ Y+I++ GL + G
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+ F EM E ++ +N +L + K DEA + +E+R++ + + + +
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + S+ R LVP V TY+ +I L K VEEA + M G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
PD N ++ + E+ A ++++ + N + T +++ L G
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P+ L+ C ++ A + FD P Y LV G +G +
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML++ + +N +++ + +AG A EM G + +Y+I
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIV 645
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ N+ T N +I + + +VEEA L + G
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +Y+ ++ V A + + M PD N V++ L++ RA
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVD-LFSSKGTCREHIRFL 802
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 153/299 (51%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE + P + L+ L K + A F+ + P V TY+ L+ G +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+KLF+ M+ + C + ++N L++ CK+G IDEA G+L EM PD +YS
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ ++L+ M+ Y L+P++ TY+ ++ LCK ++EA++LL M E
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y ++ C+ ++ A L + + + + PD TY +++ L++ G + A
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E++ M G P+ TY+V++ G + G A + E MV G SST +ML +
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFL-RNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 158/306 (51%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G KP++ ++ +LCK K + A +F +P V TYS ++ G ++G
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA LF +M+ER D + N L++ + K G I EA + M G EP+ +Y+
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C + + ++ + M R P+V +YN +I+ CK+ +++EA LL EM +
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C A +L+ M ++PD TY++VL L + G D A
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ ++M++ P++ Y++++ G+C GKLE A + F + +GI P T ++ +
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMC-NFGKLEAARELFSNLFVKGIQPDVVTYTVMISG 406
Query: 300 LVGLGF 305
L+ G
Sbjct: 407 LLKGGL 412
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 164/311 (52%), Gaps = 8/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G++P+ LL+ L + + A + FD K + P V TYS ++ GL +G
Sbjct: 38 MFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGS 97
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M E+ C +++ ++++++++CK I EA L EM + G P+ +YS
Sbjct: 98 TTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSS 157
Query: 120 FIHAFCE---ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+H FC +N+ S+F+ M N++P+ T+N ++ L K + EA + + MI
Sbjct: 158 ILHGFCNLGRSNEATSLFK---QMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMI 214
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
E+G P+ +YNA++ +C +++++ A +L M ++ P +YN+++K + GR D
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A + M + P TYS ++ G C + G+ ++A K E M G+ P T ++
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFC-QDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333
Query: 297 RNRLVGLGFLD 307
+ L G LD
Sbjct: 334 LDGLCKQGHLD 344
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 112 PDAFSYSIFIHAFCEAN--DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD ++ +I I+ FC +N H F VL +M + L PN T++ ++ L K+ +A
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L DEM++ G PD +Y+ I+ C MA++L+ +M ++ P+ Y+ ++ L
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ A E M RG P+V TYS ++HG C G+ EA F+ MV+ + P
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFC-NLGRSNEATSLFKQMVERNVMPD 186
Query: 290 SSTVEMLRNRL 300
+ T +L + L
Sbjct: 187 TVTFNILVDGL 197
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G PS+ + L+ CK + A H+ TP TYS L++G G
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A+KL +EM D++ ++ +L+ +CK G++DEA +L+ M+ EP+ F Y+I
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + ++ + P+V TY +I L K EA +L +M G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ +YN I+ + + A RLI M D T+ M+ L R
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 5/222 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAH---GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D+ L+ C + N D H +L M +G +P+ ++S ++ I
Sbjct: 9 DVYTLTILINCFCHS-NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ D M + P+V TY+ II LCK A QLL +M E+G P+ Y+ I+
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A+ ++ M + P+ TY+ +L +GR + AT +++ M +R P
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
T++++V GL K+ LE C FE M+++G+ P +T L
Sbjct: 188 VTFNILVDGLSKEGMILEAQC-VFETMIEKGVEPNVNTYNAL 228
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 162/320 (50%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI+P + L++ C +K A F+ + P V +YS ++ GL G
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGN 212
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L +M E+ C +++A+ ++++++CK +++A +L EM G PD +YS
Sbjct: 213 TSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYST 272
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC ++ + + M N++PN T+ ++ LCK V EA + + M ++G
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A P+ ++YNA++ +C +++ A +++ M + P H+YN+++ + R D A
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M ++ P TYS ++ GLC + G+ +EA F+ M G+ P T L +
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLC-QVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDG 451
Query: 300 LVGLGFLDIIEILADKMERS 319
L G LD L M+ S
Sbjct: 452 LCKHGHLDEALKLLKSMQES 471
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G KP++ ++ +LCK V A P V TYS ++ G +G
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA LF+EM+ R + + L++ +CK G + EA + M GAEP+A++Y+
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +VLD M P V +YN +I CK +++EA LL EM E+
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C AL L M ++PD TY+ +L L + G D A
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +SM++ P + Y++++ G+ GKLE A + F + +GI P T ++
Sbjct: 463 KLLKSMQESKIEPDIVLYNILIEGMF-IAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 521
Query: 300 LVGLGFLDIIEILADKME 317
L+ G D L KME
Sbjct: 522 LLKEGLSDEAYELFRKME 539
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYS--ILVRGLGDVG 58
M+ +PS+ + + L ++ K+K N F T YS IL+ L +
Sbjct: 83 MLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLC-NQMDLFGVTHNVYSLNILINCLCRLN 141
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A + +M + D + N+L+ C G I EA G+ EM G +PD SYS
Sbjct: 142 HVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C++ + ++L M+ PN+ Y II LCK+ V +A LL EM++R
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR 261
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y+ IL C +N A L M NVMP+ T+ +++ L + G A
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V+E+M K+G P+ TY+ ++ G C +++EA K ++MVD+G P + +L N
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNN-QMDEAQKVLDIMVDKGCAPVVHSYNILIN 380
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI P + +LH C H+ A F+ P T++ILV GL G
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGM 317
Query: 60 LSEAR-----------------------------------KLFDEMLERKCPVDILAHNS 84
+SEAR K+ D M+++ C + ++N
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ CK +DEA +L EM PD +YS + C+ + M
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L+P++ TY+ ++ LCK+ ++EA +LL M E PD YN ++ ++ +A
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L +++ + + P TY +++K L++ G D A E++ ME GF P+ +Y+V++ G
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF 557
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + A + + MV + SST +ML
Sbjct: 558 LQNQDS-STAIRLIDEMVGKRFSADSSTFQML 588
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G P ++ + L++ CKR+ + A + ++ E TP TYS L++GL VG
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LF EM D++ +++LL+ +CK G++DEA +L+ M+ EPD Y+I
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + + P + TY +I+ L K +EAY+L +M + G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P+ SYN I+ + + A+RLI M + D T+ M+L L
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDL 591
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F ML ++ L ++ K + +M G + +S +I
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C N + VL M + + P+ T+N +I C +++EA L +EM+ RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SY+ ++ C +MAL+L+ +M ++ P+ Y ++ L + + A
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M RG P V TYS ++HG C G L EA F MV + P + T +L +
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFC-SLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 300 L 300
L
Sbjct: 312 L 312
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
+ID+A M + P + F+ + + +V + + M + + NV++ N
Sbjct: 72 SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+ V A +L +M + G PD ++N ++ C E+ A+ L M +
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
PD +Y+ V+ L + G A ++ ME++G P++ Y+ ++ LCK + +
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT-LVND 250
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
A MVD GIPP T + + LG L+ IL ++M
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 151/274 (55%), Gaps = 2/274 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ ALC K+V A F ++ P V TY+ L+R L + G S+A +L +M+ERK
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ ++L++A K G + EA + EM +PD F+YS I+ FC + +
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ + M + PNV TYN +I+ CK ++VEE +L EM +RG + +YN ++
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ +MA ++ +M + V PD TY+++L L + G+ ++A V+E ++K P +
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 485 YTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 517
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D E+ P T++ L+ GL +
Sbjct: 125 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ R C D+ + +++ +CK G+ID A +L++M E D Y+
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C +++ + M + PNV TYN +IR LC + +A +LL +MIER
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M + +P+V TY+ ++ G CK K ++EE + F M G+ + T L
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYNTLIQG 423
Query: 300 LVGLGFLDIIEILADKM 316
L G D+ + + KM
Sbjct: 424 LFQAGDCDMAQKIFKKM 440
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 328
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I
Sbjct: 329 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 388
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TYN +I+ L + + A ++ +M+ G PD
Sbjct: 389 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 448
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C ++ AL + + K + PD +TYN++++ + + G+ + +++
Sbjct: 449 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 508
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
S+ +G P+V Y+ M+ G C +KG EEA F M ++G P S T ++R RL
Sbjct: 509 SLSLKGVKPNVIIYTTMISGFC-RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G +P ++ +++ LCKR + +A K + V Y+ ++ L +
Sbjct: 195 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 254
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM + +++ +NSL+ +C G +A +L +M P+ ++S
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 314
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + + ++ D M + ++ P++FTY+ +I C +++++EA + + MI +
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 374
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C V + L M++ ++ + TYN +++ L + G D A
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++ M G P + TYS+++ GLC K GKLE+A FE + + P
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLC-KYGKLEKALVVFEYLQKSKMEP 482
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 19/289 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--------PTVKTYSILVR 52
M++ I P I+ L++ C H D AKH F P V TY+ L++
Sbjct: 335 MIKRSIDPDIFTYSSLINGFC-------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 387
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G + E +LF EM +R + + +N+L++ + +AG+ D A + ++M S G P
Sbjct: 388 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 447
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YSI + C+ + V + +++ + P+++TYN +I +CK KVE+ + L
Sbjct: 448 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 507
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ +G P+ Y +++ C + A L M ++ +P+ TYN +++ +R
Sbjct: 508 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 567
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
G + E+ + M GF ST S++++ L G+LE++ Y EM+
Sbjct: 568 GDKAASAELIKEMRSCGFVGDASTISMVINML--HDGRLEKS--YLEML 612
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L + M + D+ ++N L+ C+ + A +
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EPD + S ++ +C I ++D M PN T+N +I L
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M+ RG PD ++Y ++ C R ++++AL L+ +M K + D
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++ L + A ++ M+ +G P+V TY+ ++ LC G+ +A + M
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDM 300
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS I ++ + G
Sbjct: 301 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 353
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+ PSI + ++LL A+ K + + ++ + + +Y+IL+ +
Sbjct: 55 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 114
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + +M++ DI+ +SLL C I EA ++ +M + +P+ +++
Sbjct: 115 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 174
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH N ++D M P++FTY ++ LCK ++ A LL +M +
Sbjct: 175 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 234
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y I+ C+ VN AL L T M + + P+ TYN +++ L GR+ A+
Sbjct: 235 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 294
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
+ M +R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 295 RLLSDMIERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
GI P + + L+ +CK V+ A + D K P V TY+ ++ L G++ EA
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ M C D++ N+LL+ CKAG + A +L EM PD +Y+I ++
Sbjct: 259 AEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + F +L+ + R +P+V Y ++ LCK+ ++EEA++L+ EM RG
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTG 375
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y+++++ +C V+ A ++ M N++P TYN+VL L++ G +A +
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ RG+ P V TY+ ++ GLCK ++ EAC + M G P T+ + L +
Sbjct: 436 DLVARGYVPDVVTYNTLIDGLCKAN-RVREACDLADEMASRGCFPNDVTLGSVVFGLCRV 494
Query: 304 GFLDIIEILADKMER 318
G +D L +M R
Sbjct: 495 GRVDDAWSLVVEMSR 509
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P + + LL CK + A + + + P V TY+ILV GL VG++ A
Sbjct: 268 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 327
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +E++ + D++A+ SL++ +CK+G I+EAH +++EM G YS + +C
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC 387
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A ++H +L M N+VP +FTYN ++ L K+ + +A L+ +++ RG PD
Sbjct: 388 RAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ C V A L M P+ T V+ L RVGR D A + M
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEM 507
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++ P+V Y+ ++ GLCK ++++AC + M +G+
Sbjct: 508 SRKRHAPNVVVYTSLIDGLCKSD-RMDDACMVLDAMRGQGV 547
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 158/304 (51%), Gaps = 13/304 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVG 58
++ G P++ L+ CK A +F A EF+ P V +++L+ GL G
Sbjct: 53 LLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL-RALDEFSVAPDVYIFNVLIHGLFKDG 111
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFS 116
+A KLF+ M + +I+ +N+++ +CK+GN+++A +L EM G + PD +
Sbjct: 112 NPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I+AF A+ I + MK + P+V T N ++ +CK+ VEEA ++LD M
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G PD +YN+I+ C +V A ++ M+ PD T+N +L + G
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLP 288
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
RA EV E M + P V TY+++V+GLC + G+++ A E +V +G P Y+S
Sbjct: 289 RALEVLEEMCRENILPDVITYTILVNGLC-RVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347
Query: 293 VEML 296
V+ L
Sbjct: 348 VDGL 351
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L++ LC+ V+VA + + + P V Y+ LV GL GE+ EA
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 361
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
KL EM R C ++ ++SL+ C+AGN+ +A +L EM SI P F+Y+I +
Sbjct: 362 KLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGL 421
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ I ++ + VP+V TYN +I LCK +V EA L DEM RG P++
Sbjct: 422 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPND 481
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ +++ C V+ A L+ M+++ P+ Y ++ L + R D A V ++
Sbjct: 482 VTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDA 541
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G Y ++ + G++ EA ++ MV G P ST + L
Sbjct: 542 MRGQGVALDDFAYRKLIVSM-SHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 81/366 (22%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGEL--- 60
G K ++ + LL L K H + + + H +P + T+ IL+RG G+
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 61 --------------------------------SEARKLFDEMLERKCPVDILAHNSLLEA 88
+A KLF+ M + +I+ +N+++
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 89 MCKAGNIDEAHGMLRE-------------------------------------MRSIGAE 111
+CK+GN+++A +L E M++ G
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
PD + +I + C+ D+ +LD MK VP+V TYN II LC KV EA ++
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
L M +PD ++N +L C + AL ++ M +EN++PD TY +++ L R
Sbjct: 262 LKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM----VDEGIP 287
VG+ A + E + ++G+ P V Y+ +V GLC K G++EEA K + M G+
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC-KSGEIEEAHKLVKEMSVRGCRTGVV 377
Query: 288 PYSSTV 293
YSS V
Sbjct: 378 MYSSLV 383
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 5/258 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+A QFFD A + + V +Y+ L+ L G K++ ++L C +++ L
Sbjct: 9 LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ CKAG A LR + PD + +++ IH + + ++ ++M+ +
Sbjct: 69 IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAYHCDRAEVNMA 203
P + TYN +I LCK+ +E+A +LL+EMI +G PD +YN ++ + + A
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+M + PD T N+++ + + G + A E+ + M+ G P V TY+ ++H
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248
Query: 264 LCKKKGKLEEACKYFEMM 281
LC GK+ EA + + M
Sbjct: 249 LC-VAGKVVEAAEILKTM 265
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V G P + + L+ LCK V+ A D A P T +V GL VG
Sbjct: 437 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGR 496
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L EM ++ +++ + SL++ +CK+ +D+A +L MR G D F+Y
Sbjct: 497 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRK 556
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
I + + + D M +P+
Sbjct: 557 LIVSMSHGGRVAEAMAMYDEMVARGFLPD 585
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 158/299 (52%), Gaps = 7/299 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
EFGI+ + LL LC+ KHV+ A F + + EF ++T +I++ G +G + E
Sbjct: 200 EFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWCVLGNVHE 259
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++++ +++ KC D++++ +++ A+ K G + +A + R + G PD + I
Sbjct: 260 AKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVID 319
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN- 181
A C I V M PNV TYN +++ LCK + E+ ++L++EM +G +
Sbjct: 320 ALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSC 379
Query: 182 -PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ ++ +L Y +V+ L RM K YN++ +L V+ ++ E
Sbjct: 380 SPNDVTFGYLLKYSQRSKDVDAVLE---RMAKNKCEMTSDLYNLMFRLYVQWDNEEKVRE 436
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+W ME+ G P TY++ +HGL KGK+ EA YF+ M+ +G+ P T EML N+
Sbjct: 437 IWGEMERSGLGPDQRTYTIRIHGL-HTKGKIGEALSYFQEMMSKGMVPEPRT-EMLLNQ 493
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 34/238 (14%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y+ ++ LG + E ++ DEM +R VD + LL A +DEA G+
Sbjct: 139 VYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVFERR 198
Query: 106 RSIGAEPDAFSY----------------------------------SIFIHAFCEANDIH 131
R G E D ++ +I ++ +C ++H
Sbjct: 199 REFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWCVLGNVH 258
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
R+ + P+V +Y +I L K K+ +A +L + E G NPD N ++
Sbjct: 259 EAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVI 318
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
C + + AL + M+++ P+ TYN +LK L ++ R ++ E+ E ME +G
Sbjct: 319 DALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKG 376
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 35/177 (19%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+ + YN I+ L K + EE +Q++DEM +R DE +Y +L + +V+ A+
Sbjct: 134 ISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVG 193
Query: 206 LITRMTKENVMPD--------------RH--------------------TYNMVLKLLVR 231
+ R + + D +H T N++L
Sbjct: 194 VFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWCV 253
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+G A +W+ + P V +Y M++ L KKGKL +A + + + + G P
Sbjct: 254 LGNVHEAKRIWKDIIASKCKPDVVSYGTMINALT-KKGKLGKAMELYRALWETGRNP 309
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDV 57
M E G P++ + LL LCK + + + + +H+ +P T+ L++
Sbjct: 337 MSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLK----- 391
Query: 58 GELSEARKLFDEMLER----KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
S+ K D +LER KC + +N + + N ++ + EM G PD
Sbjct: 392 --YSQRSKDVDAVLERMAKNKCEMTSDLYNLMFRLYVQWDNEEKVREIWGEMERSGLGPD 449
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
+Y+I IH I M +VP
Sbjct: 450 QRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 483
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+ + ++P Y + L+ LC R A D+ + P V TY+IL+
Sbjct: 147 VADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSG 206
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL DEM + C DI+ +N ++ +C+ G +D+A L+ + S G EP+ SY+I
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A +++ M + PNV T+N +I LC+ VE A ++LD++ + G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN IL C + +++ A+ + M PD +YN +L L R G D A
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ ++ +G P + +Y+ ++ GL K GK +EA + MV +G+ P
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGL-TKAGKTKEALELLNEMVTKGLQP 434
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + LL A CKR K A + D + + P + TY+++V G+ G
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + + C + +++N +L+ +C A ++A ++ EM G P+ ++++
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + VLD + +Y PN +YN I+ CK +K++ A ++ M+ RG
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN +L C EV+ A+ L+ ++ + P +YN V+ L + G+ A
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M +G P + TYS + GLC++ ++EEA + F + D GI P
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCRED-RIEEAIRAFCKVQDMGIRP 469
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 150/294 (51%), Gaps = 7/294 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P + + ++ C + A + + E P TY+ L+RGL G A +
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPME--PDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D+ML R C D++ + LLEA CK +A +L EMR+ G PD +Y++ ++ C+
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ L S+ + PN +YN +++ LC E+ E+A +L+ EM ++G P+ +
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N ++++ C R V A+ ++ ++ K P+ +YN +L + + DRA E M
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
RG YP + +Y+ ++ LC + G+++ A + + D+G P Y++ ++ L
Sbjct: 359 SRGCYPDIVSYNTLLTALC-RGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 144/293 (49%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + +++ +C+ V A +F + H P +Y+I+++GL +A
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL EM ++ P +++ N L+ +C+ G ++ A +L ++ G P++ SY+ +HA
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + ++ M P++ +YN ++ LC+ +V+ A +LL ++ ++G P
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ + AL L+ M + + PD TY+ + L R R + A +
Sbjct: 401 LISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFC 460
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ G P+ Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 461 KVQDMGIRPNTVLYNAILLGLCKRR-ETHNAIDLFIYMISNGCMPNESTYTIL 512
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 126/243 (51%), Gaps = 9/243 (3%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
+ L++ L G +EAR++ C D++A+N+++ C G +D A ++ +M
Sbjct: 98 AALIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP- 151
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
EPD+++Y+ I C + VLD M R VP+V TY ++ CK ++
Sbjct: 152 --MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A +LLDEM +G PD +YN ++ C V+ A+ + + P+ +YN+VLK
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L R++ A ++ M ++G+ P+V T+++++ LC ++G +E A + + + G
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLC-RRGLVEPAMEVLDQIPKYGCT 328
Query: 288 PYS 290
P S
Sbjct: 329 PNS 331
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P++ + L+ LC+R V+ A + D K+ TP +Y+ ++ +
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + M+ R C DI+++N+LL A+C+ G +D A +L +++ G P SY+
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M L P++ TY+ I LC+ +++EEA + ++ + G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YNAIL C R E + A+ L M MP+ TY ++++ L G A
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEAR 526
Query: 240 EVWESMEKRGF 250
E+ + RG
Sbjct: 527 ELLGELCSRGV 537
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 151/274 (55%), Gaps = 2/274 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ ALC K+V A F ++ P V TY+ L+R L + G S+A +L +M+ERK
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ ++L++A K G + EA + EM +PD F+YS I+ FC + +
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ + M + PNV TYN +I+ CK ++VEE +L EM +RG + +YN ++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ +MA ++ +M + V PD TY+++L L + G+ ++A V+E ++K P +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 501 YTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 533
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D E+ P T++ L+ GL +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ R C D+ + +++ +CK G+ID A +L++M E D Y+
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C +++ + M + PNV TYN +IR LC + +A +LL +MIER
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M + +P+V TY+ ++ G CK K ++EE + F M G+ + T L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 300 LVGLGFLDIIEILADKM 316
L G D+ + + KM
Sbjct: 440 LFQAGDCDMAQKIFKKM 456
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TYN +I+ L + + A ++ +M+ G PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C ++ AL + + K + PD +TYN++++ + + G+ + +++
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
S+ +G P+V Y+ M+ G C +KG EEA F M ++G P S T ++R RL
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFC-RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G +P ++ +++ LCKR + +A K + V Y+ ++ L +
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM + +++ +NSL+ +C G +A +L +M P+ ++S
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + + ++ D M + ++ P++FTY+ +I C +++++EA + + MI +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C V + L M++ ++ + TYN +++ L + G D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++ M G P + TYS+++ GLC K GKLE+A FE + + P
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLC-KYGKLEKALVVFEYLQKSKMEP 498
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 19/289 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--------PTVKTYSILVR 52
M++ I P I+ L++ C H D AKH F P V TY+ L++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFC-------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G + E +LF EM +R + + +N+L++ + +AG+ D A + ++M S G P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YSI + C+ + V + +++ + P+++TYN +I +CK KVE+ + L
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ +G P+ Y +++ C + A L M ++ +P+ TYN +++ +R
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
G + E+ + M GF ST S++++ L G+LE++ Y EM+
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINML--HDGRLEKS--YLEML 628
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L + M + D+ ++N L+ C+ + A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EPD + S ++ +C I ++D M PN T+N +I L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M+ RG PD ++Y ++ C R ++++AL L+ +M K + D
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++ L + A ++ M+ +G P+V TY+ ++ LC G+ +A + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDM 316
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS I ++ + G
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+ PSI + ++LL A+ K + + ++ + + +Y+IL+ +
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + +M++ DI+ +SLL C I EA ++ +M + +P+ +++
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH N ++D M P++FTY ++ LCK ++ A LL +M +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y I+ C+ VN AL L T M + + P+ TYN +++ L GR+ A+
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
+ M +R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M FG +P ++ + L LC+ V A + D + +P V TY+ LV
Sbjct: 305 MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQ 364
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A L +EM E+ ++ HN +++ +C+ G ++EA G L M G PD +Y+
Sbjct: 365 RSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYN 424
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I A C+A ++ F ++D M R L + FT N ++ LCK ++ EEA +LL +R
Sbjct: 425 TLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQR 484
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE SY ++A + + AL L M K + P TYN ++K L +G+ A
Sbjct: 485 GFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEA 544
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + + G P +TY++++H C K+G LE+A ++ MV+ P T L N
Sbjct: 545 IDKLNELMEMGLVPDDTTYNIIIHAYC-KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMN 603
Query: 299 RLVGLGFLD 307
L G L+
Sbjct: 604 GLCLYGRLE 612
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+K S+ + ++ LC+ ++ A + E TP V TY+ L+ G
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L DEM+ +D N+LL +CK +EA +LR G PD SY
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + D M + L P++ TYN +I+ L K+ EA L+E++E G
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +YN I+ +C ++ A + +M + + PD T N ++ L GR ++A
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ES ++G V TY+ ++ LCK ++ A ++F M G+ P T +L +
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDN-DVDTALRFFADMEVRGLQPDVFTYNVLLSA 674
Query: 300 LVGLG 304
L G
Sbjct: 675 LSEAG 679
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 7/263 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+K + L+ LL+ LCK K + A + F P +Y ++ +
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L+DEM++RK I +N+L++ + G + EA L E+ +G PD +Y+I
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA+C+ D+ F+ + M + P+V T N ++ LC ++E+A +L + +E+G
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C +V+ ALR M + PD TYN++L L GR A
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQ 685
Query: 240 EVWESMEKRG------FYPSVST 256
++ + + G FYPS+ +
Sbjct: 686 KMLHKLNESGKLYGRFFYPSIKS 708
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 13/289 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLGDVGEL 60
++PS+ + +L AL + + Q +A H P T+++LV G L
Sbjct: 168 VRPSLQAANAVLSALARSP--STSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTL 225
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A +M D + +N+LL A C+ G + EA +L M+ G P +Y+
Sbjct: 226 ADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTL 285
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG- 179
+ A+ I V+++M + P+++TYN + LC+ KV+EA++L DEM + G
Sbjct: 286 VSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI 345
Query: 180 ANPDEWSYNAIL--AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+PD +YN ++ + C R+ + AL L+ M ++ V T+N+++K L R G+ +
Sbjct: 346 VSPDVVTYNTLVDACFKCQRS--SDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEE 403
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
A E M + G P V TY+ ++ C K G + +A + MV G+
Sbjct: 404 ALGRLEMMTEEGLTPDVITYNTLIDASC-KAGNVAKAFVLMDEMVRSGL 451
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 37/228 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G+ P + ++HA CK ++ A QF + ++ F P V T + L+ GL G
Sbjct: 551 LMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGR 610
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A KLF+ +E+ VD++ +N+L++A+CK ++D A +M G +PD F+Y++
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670
Query: 120 FIHAFCEANDIHSVFRVL----DSMKRYN--LVPNVFT---------------------- 151
+ A EA ++L +S K Y P++ +
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGN 730
Query: 152 --------YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
YN I++LC +++EA +LDEM+++G + D +Y ++
Sbjct: 731 TQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLM 778
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 168 AYQLLDEMIERG-ANPDEWSYNAILAY--HCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
A QLL RG P + NA+L+ +L + + P+ +T+N+
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ G A M+ G P TY+ +++ C+K G L EA M E
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRK-GMLGEARTLLARMKKE 273
Query: 285 GIPPYSSTVEMLRNRLVGLGFL----DIIEIL 312
GI P +T L + LG++ D++E +
Sbjct: 274 GIVPTRATYNTLVSAYARLGWIKQATDVVEAM 305
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 6/302 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ KP L+ LC+++ A FFD+ K +F P V Y+ LVRG G +
Sbjct: 203 MEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 262
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++F EM C ++ + +++A+C+ G I AH + EM +G EP++ +++
Sbjct: 263 PEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNL 322
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR P+ TYN +I CK+ ++EA ++L+ M+++G
Sbjct: 323 LRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGC 382
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P+ ++N + +VN A RL +M + + TYN+++++ V D +
Sbjct: 383 SPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLK 442
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-----GIPPYSSTVEM 295
+ + M++ P+V+TY V++ C G A K+F MV+E +P Y ++
Sbjct: 443 LKKEMDEDDVEPNVNTYCVLIAMYC-GMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQ 501
Query: 296 LR 297
LR
Sbjct: 502 LR 503
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 4/277 (1%)
Query: 29 AHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLL 86
A FF+ ++ FT + Y+ ++ G V ++ D M R + I + L+
Sbjct: 125 ALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILI 184
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
+AG EA M +PD ++SI I C DS+K
Sbjct: 185 RRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKD-KFE 243
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+V Y ++R C+ + EA ++ EM G P+ ++Y ++ C ++ A +
Sbjct: 244 PDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDV 303
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M P+ T+N +L++ V+ GR ++ +V+ M++ G P TY+ ++ C
Sbjct: 304 FAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHC- 362
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
K G L+EA K MV +G P +ST L + L
Sbjct: 363 KDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKL 399
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 163/304 (53%), Gaps = 4/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MVE GI+ +Y + ++H C + A + D + + P V T++IL+ GL +G
Sbjct: 236 MVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLG 295
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+SEA + M++R DI+++N+L+ C +G++ EA + +M A P+ SY
Sbjct: 296 RVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYC 355
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ +C+ + +L M NLVP+ TYNC++ L K+ + + L++ M
Sbjct: 356 TLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRAS 415
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G D +YN +L + + + AL L + + + P+ TYN++L L + GR A
Sbjct: 416 GQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA 475
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA-CKYFEMMVDEGIPPYSSTVEMLR 297
E+++ + +G P++ TY++M+HGLC K+G L+EA ++M+ + +P Y + ++R
Sbjct: 476 KEIFQLLSAKGCQPNIRTYNIMIHGLC-KEGFLDEAEALLYKMVNNNYLPNYITFDTIVR 534
Query: 298 NRLV 301
LV
Sbjct: 535 AILV 538
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 183/391 (46%), Gaps = 79/391 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR----KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
+++ G + + L L+ LC + + V + H++ D F Y ++ GL
Sbjct: 131 ILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRG---FRFDEVCYGTIINGLCK 187
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+G+ +A ++F +M + + +++ +N++++ +CK G +DEA G+ EM G E D +S
Sbjct: 188 IGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYS 247
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y+ IH FC + ++LD M R + P+V+T+N +I LCK +V EAY ++ M
Sbjct: 248 YNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVM 307
Query: 176 IERGANPDEWSYNAILAYHCDRAEV----------------------------------- 200
I+RG PD SYNA++ +C V
Sbjct: 308 IKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMV 367
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-------------------------- 234
+ A+ L+T M +N++PD TYN +L L + GR
Sbjct: 368 DEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVL 427
Query: 235 ---------FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
FD+A +++ + + G P++ TY++++ GLCK G+L+ A + F+++ +G
Sbjct: 428 LDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKS-GRLKYAKEIFQLLSAKG 486
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P T ++ + L GFLD E L KM
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
++LL L K K + +K P++ T+SIL+ +G++ A L +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
L+ +D+ +L++ +C G + EA +L E G D Y I+ C+
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
++ MK+ + PN+ YN +I LCK V+EA L EM+E G D +SYN++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 191 LAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ C A++L+ M + V PD +T+N+++ L ++GR A V M KRG
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ P + +Y+ +++G C G + EA + F+ MV+ P
Sbjct: 312 WKPDIVSYNALMNGYC-LSGSVGEAKQVFDKMVERTALP 349
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P +Y + L+ LCK V A+ K + P + +Y+ L+ G G + EA+
Sbjct: 277 VYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAK 336
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++FD+M+ER +++++ +L+ CK +DEA +L EM + PD +Y+ +
Sbjct: 337 QVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
++ + ++++M+ ++ TYN ++ K+EK ++A L +IE G +P+
Sbjct: 397 SKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN +L C + A + ++ + P+ TYN+++ L + G D A +
Sbjct: 457 RTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYK 516
Query: 245 MEKRGFYPSVSTYSVMVHGLCKK 267
M + P+ T+ +V + K
Sbjct: 517 MVNNNYLPNYITFDTIVRAILVK 539
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 131 HSVFRVLDSMKRYNLV--------------PNVFTYNCII-------------------- 156
+ + L +KRYN V P++ T++ +I
Sbjct: 73 NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNIL 132
Query: 157 ---------------RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ LC +V EA LL E ++RG DE Y I+ C +
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A+++ +M K V P+ YN V+ L + G D A + M + G V +Y+ M+
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 262 HGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGLG 304
HG C G+ + A K + MV G + P T +L + L LG
Sbjct: 253 HGFC-SVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLG 295
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV +P+ + L+ LCK HV+ A + + P V T++ L++GL
Sbjct: 363 MVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSN 422
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +LF+EM E+ C D ++ L+E++C + EA +L+EM G + Y+
Sbjct: 423 REIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNT 482
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ N + + D M+ + + TYN +I LCK+++VEEA QL+D+MI G
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y +L Y C + ++ A ++ MT PD TY ++ L + GR D A+
Sbjct: 543 LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVAS 602
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ S++ +G + Y+ ++ LCK+K + +EA + F M+++G PP
Sbjct: 603 KLLRSVQMKGMVLTPQAYNPVIQALCKRK-RTKEAMRLFREMMEKGDPP 650
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 154/288 (53%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE G + + ++ L++ LCK ++ A +F + F P T++ LV GL G +
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFI-YEEEGFCPDQVTFNALVNGLCRTGHI 318
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ ++ D MLE+ +D+ +NSL+ +CK G IDEA +L M S EP+ +Y+
Sbjct: 319 KQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL 378
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ N + + + + ++P+V T+N +I+ LC E A +L +EM E+G
Sbjct: 379 IGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC 438
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PDE++Y+ ++ C + AL L+ M + YN ++ L + R A +
Sbjct: 439 DPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAED 498
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ ME G S TY+ +++GLCK K ++EEA + + M+ EG+ P
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSK-RVEEAAQLMDQMIMEGLKP 545
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELS 61
E G P + L++ LC+ H+K + D + F V TY+ L+ GL +GE+
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA ++ M+ R C + + +N+L+ +CK +++ A + R + S G PD +++ I
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK----------------------- 158
C ++ + + MK P+ FTY+ +I
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCA 474
Query: 159 ------------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
LCKN +V +A + D+M G + +YN ++ C V A +L
Sbjct: 475 RNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQL 534
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ +M E + PD+ TY +LK + G RA ++ ++M G P + TY ++ GLC
Sbjct: 535 MDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC- 593
Query: 267 KKGKLEEACKYFEMMVDEGI 286
K G+++ A K + +G+
Sbjct: 594 KAGRVDVASKLLRSVQMKGM 613
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + Y++ + L +L L +M+ P D+ N L+ A+CKA + A M
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M + G PD +++ + F E D+ R+ + M + N ++ LCK
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++EEA + + E E G PD+ ++NA++ C + L ++ M ++ D +T
Sbjct: 282 EGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYT 339
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L ++G D A E+ M R P+ TY+ ++ LCK+ +E A + ++
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKEN-HVEAATELARVL 398
Query: 282 VDEGIPP 288
+G+ P
Sbjct: 399 TSKGVLP 405
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 42/332 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P + QLL L ++ A F +A+ ++ + L+R L G
Sbjct: 54 PPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLT 113
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNID-EAHGMLREM-RSIGAEPDAFSYSIFIHA 123
L +M K PVD LE + ++ E + + M R +PD Y++ +
Sbjct: 114 LLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSL 173
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+AN + V + M + P+V T+N +IR LCK ++ A +L++M G PD
Sbjct: 174 LVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPD 233
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMT-------------------------------- 211
E ++ ++ + A+V ALR+ M
Sbjct: 234 EKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIY 293
Query: 212 -KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+E PD+ T+N ++ L R G + E+ + M ++GF V TY+ ++ GLC K G+
Sbjct: 294 EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC-KLGE 352
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++EA + MV P + T N L+G
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTY----NTLIG 380
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 154/284 (54%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ LCK KH+ A F+ + + P V TY+ L+ L + G S+A
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L M+ERK +++ ++L++A K G + EA + EM +PD F+YS I+ F
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + + + M + PNV TYN +I+ CK ++VEE +L EM +RG +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + +MA ++ +M + V PD TY+++L L + G+ ++A V+E
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++K P + TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 533
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 159/317 (50%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D + + P T++ L+ GL +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+M++R C D++ + +++ +CK G+ID A +L++M E D Y+
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ I F + + M+ + P+VFTYN +I LC + +A +LL MIER
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M + +P+V TY+ ++ G CK K ++EE + F M G+ + T L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 300 LVGLGFLDIIEILADKM 316
L G D+ + + KM
Sbjct: 440 LFQAGDCDMAQKIFKKM 456
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 161/320 (50%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + L+H L A D + P + TY +V GL G+
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + K D++ +N++++ +CK +ID+A + +M + G PD F+Y+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L +M + PNV T++ +I K K+ EA +L DEMI+R
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TYN ++K + R +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++ GL + G + A K F+ MV +G+PP T +L +
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQA-GDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ ++ + +++S
Sbjct: 475 LCKYGKLEKALVVFEYLQKS 494
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 150/298 (50%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ + L+ LC A + N + + P V T+S L+ G+L EA
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TYN +I+ L + + A ++ +M+ G PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C ++ AL + + K + PD +TYN++++ + + G+ + +++
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
S+ +G P+V Y+ M+ G C +KG EEA F M ++G P S ++R RL
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFC-RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 19/289 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--------PTVKTYSILVR 52
M++ I P I+ L++ C H D AKH F P V TY+ L++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFC-------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G + E +LF EM +R + + +N+L++ + +AG+ D A + ++M S G P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YSI + C+ + V + +++ + P+++TYN +I +CK KVE+ + L
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ +G P+ Y +++ C + A L M ++ +PD YN +++ +R
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 583
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
G + E+ + M GF ST S++++ L G+LE++ Y EM+
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINML--HDGRLEKS--YLEML 628
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L + M + D+ ++N L+ C+ + A +
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EPD + S ++ +C + I ++D M P+ T+N +I L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D+M++RG PD +Y A++ C R ++++AL L+ +M K + D
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + D A ++ ME +G P V TY+ ++ LC G+ +A + M
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC-NYGRWSDASRLLSNM 316
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS I ++ + G
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+ PSI + ++LL A+ K K + + ++ + + +Y+IL+ +
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + +M++ DI+ +SLL C + I +A ++ +M +G +PD +++
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNT 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH N ++D M + P++ TY ++ LCK ++ A LL +M +
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YN I+ C ++ A L +M + + PD TYN ++ L GR+ A+
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
+ +M +R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 152/287 (52%), Gaps = 3/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P + + +L LCK + + AH F A + P V TYS L+ GL + +
Sbjct: 499 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 558
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L +M+E C + + ++++++ + K G +++A +LR+MR G PDA +Y+
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + +L M P+V TY + LC++ + +EA ++LD M RG
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM-PDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y++I+ C V AL +M ++ V+ P Y+ ++ L + GR D A
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E E M + G P V T+S++++GLC G+++ + F M + G
Sbjct: 739 YEFLERMIRAGRIPDVVTFSILINGLC-DAGRIDTGLELFCGMAERG 784
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 152/335 (45%), Gaps = 44/335 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G PS+ L H LC+ A + D A P TYS +V GL G
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698
Query: 60 LSEARKLFDEMLERKCPVD-ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++EA F++M + ++A+++L++ +CKAG IDEA+ L M G PD ++S
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758
Query: 119 IFIHAFCEANDI-----------------------------------HSVFRVLDSMKRY 143
I I+ C+A I + + +L+ MK +
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ N T+ +I+ LC N++++EA + E DE SYN ++ A
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQA 876
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L L+ M + PD Y V+ L + G + A ++ + M RG P + TY++M+ G
Sbjct: 877 LELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISG 936
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
L K K +L AC YFE M+ + + P YSS ++
Sbjct: 937 LSKAK-QLPLACDYFEEMLRKNLKPDAIVYSSLID 970
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 162/364 (44%), Gaps = 32/364 (8%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD----------------NAKHEFT------P 42
GI P+ + LL LCK + Q F+ + + +F P
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T+ TY+ LV GL G + +A L + M+E D++ NS+L+ +CK I +AH +
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+ G P+ +YS I + + ++L M N TY+ ++ L K
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
++E+A +L +M + G PD +YN ++ R + A+ L+ M + P TY
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+ L R GRFD A E+ + M RG P+ TYS +V GLC K G++ EA YFE M
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC-KAGRVTEALGYFEKMA 710
Query: 283 -DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST--------SCTIQELANAMRG 333
DE + P+ L + L G +D ++M R+ S I L +A R
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770
Query: 334 KTGF 337
TG
Sbjct: 771 DTGL 774
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 156/323 (48%), Gaps = 49/323 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN------------------------- 35
MV+ G P + LLHALC+ V A FF
Sbjct: 132 MVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGR 191
Query: 36 -----------AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
A+ +PTV T++I V GL G L+ A + FD M + + + +++
Sbjct: 192 LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDA 251
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ +CKAG +D A G+LR+ S + F++S +H C+A+ + ++L +M
Sbjct: 252 LIDGLCKAGKLDIALGLLRDKNS---QAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP--- 305
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
VPNV +N ++ LC+ +V+EA++L D M E G + D +YN +L C + A
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365
Query: 205 RLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM-EKRGFYPSVSTYSVMVH 262
R + M + E P+ T++ +++ L GR ++A EV+E M G P+ TY+ ++
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425
Query: 263 GLCKKKG--KLEEACKYFEMMVD 283
GLCK +LE+ FE M++
Sbjct: 426 GLCKAGDSRRLEQC---FEQMLE 445
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 36/323 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
G P++ L+ LC V A + ++ A +P TY+ L+ GL G+
Sbjct: 376 GCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRR 435
Query: 63 ARKLFDEMLERK---------------------CPVDILAHNSLLEAMCKAGNIDEAHGM 101
+ F++MLER+ C ++ +N+L+ + K+G + +A G+
Sbjct: 436 LEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGL 495
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEAN---DIHSVF-RVLDSMKRYNLVPNVFTYNCIIR 157
L M G PD +++ + C+ D H+VF R L+ R PNV TY+ +I
Sbjct: 496 LEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR----PNVVTYSTLID 551
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
L K K++EA QLL +M+E G + +Y+ ++ + A+ ++ +M +P
Sbjct: 552 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D TYN ++ + R A + M + GF+PSV TY+ + HGLC + G+ +EA +
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC-RSGRFDEAVEI 670
Query: 278 FEMMVDEGIPP----YSSTVEML 296
+ M G P YSS V+ L
Sbjct: 671 LDYMAARGCAPNAITYSSIVDGL 693
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 8/263 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LCK V A F A + F PTV TYS ++ GL E+ + KL +EM R
Sbjct: 7 LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C + + +N+L+ A+ G EA +L M + G P+ ++ + I C+ +I + F
Sbjct: 67 CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL--A 192
RV+D M VP+V + ++ LC+ +V+EA+ +++ G PD +YN ++
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186
Query: 193 YHCDRAE-VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
Y R E M L+L+ P T+ + + L + G A E ++SM + G
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSS---PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 252 PSVSTYSVMVHGLCKKKGKLEEA 274
P+ TY ++ GLC K GKL+ A
Sbjct: 244 PNTVTYDALIDGLC-KAGKLDIA 265
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY++L+ GL G + +A F + ++ ++ ++++++ +C+ +D+ +L EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G P+A +Y+ ++A F +L+ M P + T+ II+ LCK ++
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E A++++DEM++RG PD + +L C+ V+ A ++ PD TYN +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + GR + A V + + + P+V T+++ V GL K G L A ++F+ M G
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL-SKAGNLTGAYEFFDSMPQTG 241
Query: 286 IPPYSSTVEMLRNRLVGLGFLDI-IEILADK 315
+ P + T + L + L G LDI + +L DK
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDK 272
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 20/304 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P + L+ LCK + A++F + + P V T+SIL+ GL D G +
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF M ER C DI A+N+++ A C G A+ +L EM++ G + ++ I I A
Sbjct: 775 ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834
Query: 125 CEANDIHSVFRVLDSMKRYNLVP----NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
C ND R+ +++ ++ +P + +YN +I L + + E+A +LL M+ G
Sbjct: 835 C-GND-----RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGG 888
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD +Y ++ +A +L+ M PD TY +++ L + + A +
Sbjct: 889 SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACD 948
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+E M ++ P YS ++ CK K+++A ++++ GI P YS+ V+ L
Sbjct: 949 YFEEMLRKNLKPDAIVYSSLIDAFCKAD-KVDDA---WKLLRSSGIEPTITMYSTMVDSL 1004
Query: 297 -RNR 299
+NR
Sbjct: 1005 CKNR 1008
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 5/328 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P++ + L+ L K V+ A + + +P V T++ ++ GL + +A
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+F LER C +++ +++L++ + K +DEA +L +M +G + +YS +
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + VL M+ +P+ TYN +I K +++ EA LL EM+E G +P
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y + C + A+ ++ M P+ TY+ ++ L + GR A +E M
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709
Query: 246 EK-RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ P V YS ++ GLC K G+++EA ++ E M+ G P T +L N L G
Sbjct: 710 ARDEVVAPHVIAYSALIDGLC-KAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768
Query: 305 FLDI-IEILADKMERSTSCTIQELANAM 331
+D +E+ ER I NAM
Sbjct: 769 RIDTGLELFCGMAERGCKADIYAY-NAM 795
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 32/335 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G P+ + L++AL + K A + A + P + T+ ++++GL GE
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ DEM++R D+ H LL A+C+ G +DEA +++ IG PDA +Y+
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +A + + VL + P VFT+ + L K + AY+ D M + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM----------------------- 216
+P+ +Y+A++ C ++++AL L+ + M
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301
Query: 217 ------PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
P+ +N ++ L + R D A E+++ M++ G V TY++++ GLCK + +
Sbjct: 302 KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR-R 360
Query: 271 LEEACKYFEMM-VDEGIPPYSSTVEMLRNRLVGLG 304
+ EA ++ E+M EG P T L L G
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 37/280 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G K IY + +++A C + A+ + K H T+ I+++ L
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839
Query: 60 LSEARKLF--------DE-------------------------MLERKCPVDILAHNSLL 86
+ EA F DE M+ D + +++
Sbjct: 840 IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
+ + KAG+ + A +L+EMRS G PD +Y+I I +A + + M R NL
Sbjct: 900 DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ Y+ +I CK +KV++A++LL G P Y+ ++ C + AL +
Sbjct: 960 PDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEV 1016
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
I M +N P H + + V GR D A ++ ++
Sbjct: 1017 IREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 159/308 (51%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G +P++ ++ + K + V A F K + +P + TY+ L++GL + +
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM DI+ N L++ +CK G + EA G+L+ M +G EPD +YS
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + +++ ++ D+M P+VF+YN +I CK ++++EA QL +EMI +G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN ++ C + A L M +P+ TY+++L + G F +A
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +M+ P++ Y++++ +C K G L +A K F + +G+ P + + N
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMC-KSGNLRDARKLFSELFVKGLQPNAQIYTTIING 527
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 528 LCKEGLLD 535
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 159/307 (51%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G++P+I L++ LCK A + FD+ P V TY+ ++ GL +GE
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M E C +++ +++++++ K ++EA + M+ G PD F+Y+
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS 278
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + +L+ M+ N++P++ T+N ++ +CK KV EA +L M E G
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ + R+EV A +L M + PD +YN+++ +V R D A
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G P+ +Y+ ++HGLC + G L EA F+ M G P T +L +
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLC-QLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457
Query: 300 LVGLGFL 306
G+
Sbjct: 458 FCKQGYF 464
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M I P I + L+ +CK V A + P V TYS L+ G E
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSE 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD M+ + C D+ ++N L+ CK IDEA + EM G P+ SY+
Sbjct: 359 VVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNT 418
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + + +M +PN+FTY+ ++ CK +A++L M
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P+ YN ++ C + A +L + + + + P+ Y ++ L + G D A
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEAL 538
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E + +ME+ G P +Y+V++ G K + A + M D+G
Sbjct: 539 EAFRNMEEDGCPPDEISYNVIIRGFLHHKDE-SRAVQLIGEMRDKG 583
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P + L++ R V A + FD P V +Y+IL+ G V
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++LF+EM+ + + +++N+L+ +C+ G++ EA + + M + G P+ F+YSI
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ FR+ +M+ PN+ YN +I +CK+ + +A +L E+ +G
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y I+ C ++ AL M ++ PD +YN++++ + RA
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAV 573
Query: 240 EVWESMEKRGFYPSVST 256
++ M +GF V T
Sbjct: 574 QLIGEMRDKGFIADVGT 590
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 144/299 (48%), Gaps = 15/299 (5%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--------EFTPTVKTYSILVRGLGDVGE 59
P I +LL A+ K Q++D +P + T SIL+ +
Sbjct: 95 PCIIQFTKLLSAIVK------MGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQR 148
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + ++++ I+ +L+ +CK G +A + +M + G PD ++Y+
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT 208
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + +L M+ PNV TY+ II K+ +V EA + M +G
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG 268
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C+ ++ A L+ M N+MPD T+N+++ + + G+ A
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V ++M + G P V TYS +++G + ++ EA K F+ M+ +G P + +L N
Sbjct: 329 GVLKTMTEMGVEPDVVTYSSLMYGY-SLRSEVVEARKLFDAMITKGCKPDVFSYNILIN 386
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-DEAHGMLREMRSIGAEPDAFSYS 118
+ +A F+ ML RK I+ LL A+ K G D + ++M G P+ ++ S
Sbjct: 78 IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ F + F VL + + L P + T+ +I LCK K +A +L D+M+ R
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++Y I+ C E A L+ +M + P+ TY+ ++ + R + A
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLC 265
+++ M+ +G P + TY+ ++ GLC
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLC 284
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK-NEKVEEAYQLLDEMIERGANPD 183
C +I + M +P + + ++ + K + + L +M G +P+
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ + ++ V++A ++ ++ K + P T+ ++ L +VG+F +A E+++
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLR 297
M RG P V TY+ +++GLC K G+ A + M + G P YS+ ++ R
Sbjct: 193 DMVARGCRPDVYTYTTIINGLC-KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 164/318 (51%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L+ L+ LC VK A +F D + F + +Y IL+ G+ +GE
Sbjct: 119 ILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGE 178
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L + +++ ++ +++ +CK +DEA+ + EM G PD +YSI
Sbjct: 179 TRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSI 238
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC ++ +L+ M N+ P+++TY ++ LCK KV+EA +L M++
Sbjct: 239 LVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKAC 298
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D Y+ ++ +C EVN A R+ MT+ V PD H Y++++ L ++ R D A
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEAL 358
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E + ++ P TY+ ++ LC K G++ F+ M+D G PP T L +
Sbjct: 359 NLFEEIHQKNMVPDTVTYTSLIDCLC-KSGRISYVWDLFDEMLDRGQPPDVITYNNLIDA 417
Query: 300 LVGLGFLDIIEILADKME 317
L G LD L +KM+
Sbjct: 418 LCKNGHLDRAIALFNKMK 435
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 3/344 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ I+P++ ++ LCK V A+ + + +P V TYSILV G VG+L+
Sbjct: 192 WSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNR 251
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L +EM+ DI + L++A+CK G + EA +L M D YS +
Sbjct: 252 AIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMD 311
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C N++++ RV +M + + P+V Y+ +I LCK ++V+EA L +E+ ++ P
Sbjct: 312 GYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y +++ C ++ L M PD TYN ++ L + G DRA ++
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALF 431
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M+ + P+V T+++++ GLCK G+L+ A ++F+ ++ +G T ++ N L
Sbjct: 432 NKMKDQAIRPNVYTFTILLDGLCKV-GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490
Query: 303 LGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
G LD L +ME C + + + F K +++ E
Sbjct: 491 EGLLDEALALQSRME-DNGCISDAVTFEIMIRAFFDKDENDKAE 533
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 162/345 (46%), Gaps = 37/345 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + +++L +L K A + + E P T +I++ G++ A
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ + + N+L++ +C G + EA ++ + G SY I I+ C+
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + R+L ++R+++ PNV Y+ II +LCK+ V+EAY L EM+ +G +PD +
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR------------ 234
Y+ +++ C ++N A+ L+ M EN+ PD +TY +++ L + G+
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295
Query: 235 -----------------------FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ A V+ +M + G P V YS+M++GLCK K ++
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIK-RV 354
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+EA FE + + + P + T L + L G + + L D+M
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEM 399
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 37/297 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV I P IY L+ ALCK VK A K V YS L+ G V E
Sbjct: 259 MVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNE 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A+++F M + D+ ++ ++ +CK +DEA + E+ PD +Y+
Sbjct: 319 VNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTS 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ I V+ + D M P+V TYN +I LCKN ++ A L ++M ++
Sbjct: 379 LIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQA 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + T+ ++L L +VGR A
Sbjct: 439 IRPNVY-----------------------------------TFTILLDGLCKVGRLKNAL 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E ++ + +G+ +V TY+VM++GLC K+G L+EA M D G + T E++
Sbjct: 464 EFFQDLLTKGYCLNVRTYTVMINGLC-KEGLLDEALALQSRMEDNGCISDAVTFEIM 519
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P ++ +++ LCK K V A F+ + P TY+ L+ L G
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S LFDEML+R P D++ +N+L++A+CK G++D A + +M+ P+ ++++I
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + NV TY +I LCK ++EA L M + G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
D ++ ++ D+ E + A +L+ M ++
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 36/246 (14%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
N D+A M + P F ++ + + + + M+ + P+ FT N
Sbjct: 38 NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97
Query: 154 CII-----------------------------------RKLCKNEKVEEAYQLLDEMIER 178
II + LC KV+EA + D+++ +
Sbjct: 98 IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G SY ++ C E A+RL+ R+ + ++ P+ Y+M++ L + D A
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M +G P V TYS++V G C G+L A MV E I P T +L +
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFC-IVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276
Query: 299 RLVGLG 304
L G
Sbjct: 277 ALCKEG 282
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 147/288 (51%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G+ P + + ++ LCK + V A F + P TY+ ++ GL E+
Sbjct: 217 LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEV 276
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +F +M+++ + +N++++ +CKA +D A G+ ++M G +PD +Y+
Sbjct: 277 DMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+A I V M + P+ TY II LCK + V+ A + +MI++G
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +YN ++ + + ++ I M+ ++ PD TY ++L L + G+ + A
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++SM ++G PSV+ Y +M+HG KKG L E +MV GI P
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGY-GKKGALSEMHDLLNLMVANGISP 503
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 11/343 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G + + + LL LC R+ + A H D +P V +Y+I++ G +
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ +A LF LE D++ +N++++ +CKA +D A + ++M G +P+ +
Sbjct: 206 EGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I C+A ++ V M + P+ TYN II LCK + V+ A + +MI
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +YN I+ C ++ A + +M + V PD TY +++ L + D
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVD 382
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
RA V++ M +G P+ TY+ ++HG G+ EE + + M + P T +L
Sbjct: 383 RAEGVFQQMIDKGVKPNNGTYNCLIHGYL-STGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441
Query: 297 RNRLVGLGFLDIIEILADKMER---STSCTIQELANAMRGKTG 336
+ L G + L D M R S TI + GK G
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKG 484
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+KPS + ++ LCK + V A F P TY+ ++ GL
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +F +M+++ D L + +++ +CKA ++D A G+ ++M G +P+ +Y+
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + V + + M ++L P+VFTY ++ LCKN K EA L D MI +G
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P Y +L + + ++ L+ M + P+ +N V+ + D
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M+++G P+V TY ++ LC K G++++A F M++EG+ P
Sbjct: 526 HIFIKMKQQGLSPNVVTYGTLIDALC-KLGRVDDAVLQFNQMINEGVTP 573
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P++ L+ ALCK V A F+ +E TP ++ LV GL V +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +LF EML + DI+ N++L +CK G + EA ++ M +G +PD SY+
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A+ + ++LD M L PN+ +YN ++ CK +++ AY L EM+ +G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN IL + A L M K + TY+++L + FD A
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S+ + T+++M+ GL K G+ E+A F + G+ P T ++
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLF-KGGRKEDAMDLFAAIPANGLVPSVVTYRLIAEN 829
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L+ G L+ ++ L ME+S + + NA+
Sbjct: 830 LIEEGSLEELDCLFSVMEKSGTAPNSHMLNAL 861
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 149/336 (44%), Gaps = 37/336 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHA-LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+KP+ + L+H L + +V + + + H+ P V TY +L+ L G+
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EAR LFD M+ + + + +L K G + E H +L M + G P+ ++
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + I V + MK+ L PNV TY +I LCK +V++A ++MI G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 180 ANP---------------DEWS--------------------YNAILAYHCDRAEVNMAL 204
P D+W +N +L C V A
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RLI M + PD +YN ++ R D A ++ + M G P++ +Y+ ++HG
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
C K G+++ A F M+ +G+ P T + N L
Sbjct: 691 C-KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 41/319 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+P I + +L LCK V A + D+ P V +Y+ L+ G
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA----- 114
+ EA KL D M+ +I+++N+LL CKAG ID A+ + REM G P
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720
Query: 115 ----------FS--------------------YSIFIHAFCEANDIHSVFRVLDSMKRYN 144
FS YSI + FC+ N F++ S+ +
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMD 780
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L ++ T+N +I L K + E+A L + G P +Y I + +
Sbjct: 781 LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELD 840
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L + M K P+ H N +++ L+ G RA ++++ F ST S+++
Sbjct: 841 CLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLF 900
Query: 265 CKKKGK-----LEEACKYF 278
+++ + L E C++F
Sbjct: 901 SREEYQQHAKSLPEKCRFF 919
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 52/284 (18%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG-------NIDEAHGMLREMRS 107
G++G L +A KLFDE+L P + A N LL + +A + + MLR+ S
Sbjct: 20 GNLG-LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDC-S 77
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFR-------------------------------- 135
PD +YSI I FC + F
Sbjct: 78 NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGE 137
Query: 136 ----VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI---ERGANPDEWSYN 188
+L M V +YN +++ LC + EEA +LL M+ + +PD SYN
Sbjct: 138 AMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYN 197
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ + +V+ A L M V PD TYN ++ L + DRA +V++ M ++
Sbjct: 198 IVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK 254
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G P+ TY+ ++ GLCK + +++ A F+ MVD+G+ P + T
Sbjct: 255 GVKPNNVTYNTIIDGLCKAQ-EVDMAEGVFQKMVDKGVKPSNVT 297
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF P +K+++I++ G G L +
Sbjct: 211 DYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPD 270
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++++E++ K D+ + + + A+ KAG + A + M G PD + I
Sbjct: 271 AKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I ++ M +V TYN +I+ CK + E+ Y+LLD+M ++G +P
Sbjct: 331 QLCFKKKIPEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSP 390
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y IL +V + LI RM + D TYN++L L V + +VW
Sbjct: 391 NNMTYTYILKTTEKPRDV---MNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVW 447
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
E ME+ G P ++++MVHGL +G+L++A +Y+ M G+ P T
Sbjct: 448 EEMERNGSGPDQRSFTIMVHGL-HSQGQLDQALQYYTTMKSRGMTPEPRT 496
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 37/233 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P + + ++ LC +K ++
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKK----------------------------------KI 338
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA K+F EM +R C D+ +N+L++ CK ++ + +L +M G P+ +Y+
Sbjct: 339 PEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYI 398
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + D V ++ M+ + TYN I+ + + Q+ +EM G+
Sbjct: 399 LKTTEKPRD---VMNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGS 455
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
PD+ S+ ++ + +++ AL+ T M + P+ T +V + ++ G
Sbjct: 456 GPDQRSFTIMVHGLHSQGQLDQALQYYTTMKSRGMTPEPRTRILVKAIHIKKG 508
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P +Y + ++ +CK V+ A + + + P V +Y+IL+R + G+
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KL EM R C + + ++ L+ ++C+ G IDEA +L+ M PD +SY
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + ++D M +P++ YN I+ LCKN +A ++ +++ G
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN +++ + + AL ++ M + V PD TYN ++ L R G + A
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + ME+ GF P+V +Y++++ GLCK + ++++A F M+++G P +T +L
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVR-RIDDAIGMFAEMIEKGCRPNETTYILL--- 528
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 529 IEGIGF 534
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 161/314 (51%), Gaps = 9/314 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P I + ++ +LC R+ + +A + D + PTV TY+IL+ G ++EA
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +EML R D+ +N+++ MCK G ++ A ++ + S G +PD SY+I + A
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRA 286
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F +++ M PN TY+ +I LC+ +++EA +L MIE+ PD
Sbjct: 287 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 346
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+SY+ +++ C +++A+ ++ M +PD YN +L L + G ++A E++
Sbjct: 347 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 406
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RN 298
+ G P+VS+Y+ M+ L G A M+ +G+ P Y+S + L R+
Sbjct: 407 KLRGMGCPPNVSSYNTMISAL-WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRD 465
Query: 299 RLV--GLGFLDIIE 310
LV +G LD +E
Sbjct: 466 GLVEEAIGLLDDME 479
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 160/305 (52%), Gaps = 3/305 (0%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L +LL+ CK + F + ++ +TP V + L++G + + +A ++ E+L
Sbjct: 71 LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EIL 129
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
E D+ A+N+++ CK I+ A +L M++ G PD +Y+I I + C +
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+VLD + N +P V TY +I + EA +LL+EM+ RG PD ++YNAI+
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C V A LIT +T + PD +YN++L+ + G++D ++ M RG
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+ TYS+++ LC + G+++EA ++M+++ + P + + + L + L G LD+
Sbjct: 310 PNKVTYSILISSLC-RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368
Query: 312 LADKM 316
+ D M
Sbjct: 369 IMDYM 373
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
+V G P + +L+ K+++ A + + + P V Y+ ++ G V +
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRI 153
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ + M R DI+ +N ++ ++C + A +L ++ P +Y+I
Sbjct: 154 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTIL 213
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A I+ ++L+ M L+P+++TYN IIR +CK VE A +L+ + +G
Sbjct: 214 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGC 273
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD SYN +L ++ + + +L+ M P++ TY++++ L R GR D A
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V + M ++ P +Y ++ LC K+G+L+ A + M+ G P
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALC-KEGRLDLAIGIMDYMISNGCLP 380
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G +P+ L+ +LC+ + A + E TP +Y L+ L G
Sbjct: 303 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 362
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + D M+ C DI+ +N++L A+CK GN ++A + ++R +G P+ SY+
Sbjct: 363 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 422
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A D ++ +M + P+ TYN +I LC++ VEEA LLD+M + G
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN +L C ++ A+ + M ++ P+ TY ++++ + G A
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542
Query: 240 EVWESMEKR 248
E+ S+ R
Sbjct: 543 ELANSLFSR 551
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E P ++ LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R+ D++ ++S++ A+CK +D+A +L M G P+ +
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + P+V TYN ++ LCKN + EA ++ D M
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +Y +L + + + L+ M + + PD H +N+++ + + D
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A V+ M + G P+V TY ++ LC K G +++A YFE M+DEG+ P Y+S
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILC-KSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447
Query: 293 VEML 296
+ L
Sbjct: 448 IHSL 451
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 147/324 (45%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P+ + +LH C + K A F + + P V TY+ L+ L G
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R DI + +LL+ G + E H +L M G PD ++I
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + V M+++ L PNV TY +I LCK+ V++A ++MI+ G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 180 ANP---------------DEWS--------------------YNAILAYHCDRAEVNMAL 204
P D+W +N+I+ HC V +
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+L M + V P+ TY+ ++ G+ D AT++ SM G P TY+ +++G
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C+ ++++A F+ MV G+ P
Sbjct: 557 CRVS-RMDDALALFKEMVSSGVSP 579
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV GI P + + L+ A K++ V A F + H P V TY ++ L G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ +I+ + SL+ ++C D+A ++ EM G + ++
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+ C+ + ++ D M R + PNV TY+ +I C K++EA +LL M G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + ++ AL L M V P+ TYN++L+ L R A
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ + K G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 660
Query: 300 LVGLG 304
L+ +G
Sbjct: 661 LLKVG 665
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILV---------- 51
G SIY L++ L + + ++ A+ + TPTV TY IL+
Sbjct: 45 GRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLD 104
Query: 52 ---RGLGDV-----------------GELSEARK------LFDEMLERKCPVDILAHNSL 85
LG+V G ++ R + M E C D+ + L
Sbjct: 105 LGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 164
Query: 86 LEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
L+ +C EA +L M R G+ PD SY+ I+ F + D + M
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ P+V TY+ II LCK + +++A ++L M++ G P+ +YN+IL +C +
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 345 GY-ATKGALVEMHALLDLMVRNGIHP 369
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P + ++ ALCK + + A + K+ P TY+ ++ G +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA + M G EPD +Y
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + P+ +N +I K EKV+EA + +M + G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +Y A++ C V+ A+ +M E + P+ Y ++ L ++D+A
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG + ++ ++H C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHC-KEGRVIESEKLFDLMVRIGVKPNVITYSTLID 519
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P+I L+H+LC K K + ++ ++ G
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E+ KLFD M+ +++ +++L++ C AG +DEA +L M S+G +PD +Y+
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + + + M + PN+ TYN I++ L + A +L + + G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN IL C + ALR+ + ++ + T+N+++ L++VGR D A
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+++ ++ G P V TYS+M L ++
Sbjct: 672 DLFAALSANGLVPDVRTYSLMAENLIEQ 699
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G+KP + L++ C+ + A F + +P + TY+I+++GL
Sbjct: 537 MFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 596
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + + +++ +N +L +CK DEA M + + + + +++I
Sbjct: 597 TAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 656
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY+ + L + +EE L M E G
Sbjct: 657 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 716
Query: 180 ANPDEWSYNAILAYHCDRAEVNMA 203
+ N+I+ R ++ A
Sbjct: 717 CTANSRMLNSIVRKLLQRGDITRA 740
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYN---AILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + +E++ RG + N A +A H A V+ R+ R V P HTY
Sbjct: 32 EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRM-ARAGAGKVTPTVHTY 90
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADK 136
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 2/302 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
FG+ ++Y L+ L++ LC+ HV A K PT T++ L+ GL + G++ E
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +LF+EM+ R +++++N+++ +CK GN A + ++M G +PD +Y+ I
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ C+ ++ L M + PNVFTYNC++ C ++ EA +L EM+ R P
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D + ++ C V+ A + MT++ V P+ TYN ++ + A +V+
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E M ++G P V +Y+++++G CK + +++EA M + + P + T L L
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSR-RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415
Query: 303 LG 304
G
Sbjct: 416 FG 417
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G KP + + ++ +LCK + V A +F P V TY+ +V G +G+
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +LF EM+ R D + L++ +CK G + EA + M G EP+ +Y+
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNA 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C ++ +V + M R P V +YN +I CK+ +++EA LL EM +
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y+ ++ C AL + M ++P+ TY+++L + G D A
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +SM+++ P++ +++++ G+ GKLE A + F + +GI P T ++
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMF-IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517
Query: 300 LVGLGFLDIIEILADKME 317
L+ G D L KME
Sbjct: 518 LLKEGLSDEAYDLFRKME 535
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV + P L L+ LCK V A F+ + P + TY+ L+ G
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL 348
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA+K+F+ M+ + C + ++N L+ CK+ +DEA +L EM PD +YS
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + M Y L+PN+ TY+ ++ CK+ ++EA +LL M E+
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + ++ ++ +A L +++ + + P TY +++K L++ G D A
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ ME GF P+ +Y+VM+ G + + A + + MV + ST +ML
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS-STAIRLIDEMVGKRFSANLSTFQML 584
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ +M G + +S ++ I+ C N + +L M + + P T+N +I LC
Sbjct: 110 LCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLC 169
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K++EA +L +EM+ RG P+ SYN I+ C +MA+ + +M + PD
Sbjct: 170 NEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVV 229
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN ++ L + + A E M RG P+V TY+ MVHG C G+L EA + F+
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFC-ILGQLNEATRLFKE 288
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
MV + P + T+ +L + L G + ++ + M
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
+ID+A M + P + F+ +F + +V + + M + + NV++ N
Sbjct: 68 SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+ V+ A +L +M + G +P ++NA++ C+ ++ A+ L M +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
P+ +YN ++ L + G A +V++ ME+ G P V TY+ ++ LCK + + +
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDR-LVND 246
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
A ++ M+D GIPP T + + LG L+
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLN 280
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P ++ + L++ CK + + A H+ P TYS L++GL G
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F EM +++ ++ LL+ CK G++DEA +L+ M+ EP+ ++I
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTI 478
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + + P + TY +I+ L K +EAY L +M + G
Sbjct: 479 LIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 538
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P+ SYN ++ + + A+RLI M + + T+ M+L L
Sbjct: 539 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDL 587
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M +G+ P++ LL CK H+ A + + + + P + ++IL+ G+ G+
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A++LF ++ I + +++ + K G DEA+ + R+M G P++ SY++
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
I F + D + R++D M N+ T+ ++ ++E + +
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEIISQ 596
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N +++A M+ P + L + + + + L +M V + ++
Sbjct: 66 NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N+++ L R+ D A + M K G +P+ ST++ +++GLC +GK++EA + F M
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLC-NEGKIKEAVELFNEM 184
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
V G P + + N L G + + KME++
Sbjct: 185 VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN 222
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 148/292 (50%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E P ++ LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 157 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 216
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML R+ +++ ++S++ A+CKA +D+A +L M G PD +
Sbjct: 217 EGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 276
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS +H +C + L+ M+ + PNV TY ++ LCKN + +A ++ D M
Sbjct: 277 YSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMT 336
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +Y +L + + + L+ M + + PD H +N+++ + + D
Sbjct: 337 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 396
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A V+ M + G P+V Y ++ LC K G +++A YFE M+DEG+ P
Sbjct: 397 QAMLVFSKMRQHGLNPNVVCYGTVIDVLC-KSGSVDDAMLYFEQMIDEGLTP 447
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILV---------- 51
G SIY ++ L + + F A+ E TP + TYSIL+
Sbjct: 53 GWGASIYSFNRTLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLD 112
Query: 52 ---RGLGDV-----------------GELSEARK------LFDEMLERKCPVDILAHNSL 85
LG+V G ++ R + M E C D+ + L
Sbjct: 113 LGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 172
Query: 86 LEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
L+ +C EA +L M R G+ PD SY+ I+ F + D + M
Sbjct: 173 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLG 232
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ PNV TY+ II LCK + +++A ++L+ M++ G PD +Y++IL +C +
Sbjct: 233 RRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKE 292
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
+ + +M + V P+ TY ++ L + GR +A ++++SM KRG P ++TY ++
Sbjct: 293 DIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQ 352
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 353 GY-ATKGALVEMHALLDLMVRNGIQP 377
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 44/280 (15%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSI 119
AR + DE+ R I + N L + + + A + M GA+ PD +YSI
Sbjct: 42 ARHVLDELPLRGWGASIYSFNRTLTDVAR-DSPAAAVSLFNRMARAGADEVTPDLCTYSI 100
Query: 120 FIHAFCEA-----------NDIHSVFR-------------------------VLDSMKRY 143
I C A N I FR VL M
Sbjct: 101 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTEL 160
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE---RGANPDEWSYNAILAYHCDRAEV 200
+ +P+VF+ +++ LC + +EA +LL M + G+ PD SY ++ +
Sbjct: 161 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 220
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A M + P+ TY+ ++ L + D+A EV +M K G P TYS +
Sbjct: 221 DKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSI 280
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+HG C G+ +E M +G+ P T L N L
Sbjct: 281 LHGYC-SSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYL 319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK---ENVMPD 218
E A +LDE+ RG +S+N L R A+ L RM + + V PD
Sbjct: 36 GSGTEGARHVLDELPLRGWGASIYSFNRTLT-DVARDSPAAAVSLFNRMARAGADEVTPD 94
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
TY++++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 95 LCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADK 144
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 149/286 (52%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSE 62
G P+ + L+ A C+ + A + + E P + T++ +V GL G +
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEG 241
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
ARK+FDEM+ D++++N+LL CK G + E+ + EM G PD +++ IH
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+A ++ ++ M+ L N T+ +I CK +++A ++EM + G P
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YNA++ +C +++A LI M + V PD TY+ ++ +VG D A ++
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 421
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M K+G P TYS ++ GLC++K +L +AC+ FE M+ G+ P
Sbjct: 422 QKMLKKGVLPDAITYSSLIRGLCEEK-RLNDACELFENMLQLGVQP 466
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 162/299 (54%), Gaps = 2/299 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E KP++ + +++ LCK ++ A + FD E P V +Y+ L+ G VG L
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E+ +F EM +R D++ SL+ A CKAGN+++A ++ +MR G + +++ I
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ + ++ M++ + P+V YN +I CK +++ A +L+ EM +
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK 395
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y+ I++ +C ++ A +L +M K+ V+PD TY+ +++ L R + A E+
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+E+M + G P TY+ ++ G C K+G +E+A + M+ +G+ P T +L N L
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHC-KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 3/279 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P+V Y+ ++ L D L AR+ ML ++ +N L+ A+C G ++EA
Sbjct: 114 YAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRK 158
G++ +MR G P+A +Y+ + AFC A ++ RV+ M+ N PN+ T+N ++
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LCK ++E A ++ DEM+ G PD SYN +L+ +C ++ +L + + MT+ ++PD
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
T+ ++ + G ++A + M +RG + T++ ++ G C KKG L++A
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC-KKGFLDDALLAV 351
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
E M GI P L N LG +D+ L +ME
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----------------------------HQF 32
M + G+ P + L+HA CK +++ A F
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 33 FDNA--------KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
D+A K P+V Y+ L+ G +G + AR+L EM ++ D++ +++
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ CK GN+D A + ++M G PDA +YS I CE ++ + ++M +
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+ FTY +I CK VE+A L DEMI +G PD +Y+ ++ A A
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 205 RLITRMTKENVMPDRHTYN---------------MVLKLLVRVGRFDRATEVWESMEKRG 249
RL+ ++ E+ +PD Y+ +LK G A +V++SM R
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
+ S YS+++HG C + G + +A + + M+ G P S ST+ ++R
Sbjct: 584 WKLDGSVYSILIHGHC-RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 152/333 (45%), Gaps = 43/333 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS+ + +L AL + A +F + +H P V TY+ILVR L G L EA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA------------------------H 99
+ +M C + + +N+L+ A C+AG +D A +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 100 GMLREMRSIGAE------------PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
G+ + R GA PD SY+ + +C+ +H V M + LVP
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+V T+ +I CK +E+A L+ +M ERG +E ++ A++ C + ++ AL +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M K + P YN ++ ++GR D A E+ ME + P V TYS ++ G C K
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC-K 410
Query: 268 KGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
G L+ A + + M+ +G+ P YSS + L
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 4/213 (1%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P +Y+ + A +A+ + S R L SM R+ + PNV+TYN ++R LC ++EEA
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLK 227
++ +M G P+ +YN ++A C E++ A R+++ M +E N P+ T+N ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + GR + A +V++ M + G P V +Y+ ++ G C K G L E+ F M G+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC-KVGCLHESLAVFSEMTQRGLV 290
Query: 288 PYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
P T L + G L+ + ++A ER
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+ A+N++L A+ A ++ A L M G P+ ++Y+I + A C + V+
Sbjct: 117 SVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG-ANPDEWSYNAILAYHCD 196
M+ PN TYN ++ C+ +++ A +++ M E G A P+ ++N+++ C
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ A ++ M +E + PD +YN +L +VG + V+ M +RG P V T
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++ ++H CK G LE+A M + G+ T L + GFLD + ++M
Sbjct: 296 FTSLIHATCKA-GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 317 ERSTSCTIQ 325
+ C IQ
Sbjct: 355 RK---CGIQ 360
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ CK +V+ A D + P V TYS+L+ GL
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------LEAMCKAGNIDEAHGMLRE 104
EA +L ++ D + +++L L+ C G + EA + +
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M + D YSI IH C ++ M R PN + ++R L +
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 165 VEEAYQLLDEMI 176
V EA + +++
Sbjct: 639 VVEADNAIQDLL 650
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GIK ++ L L++ C HV F K F P V ++ L+ G+ +G+ A
Sbjct: 70 GIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELA 129
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM C D++ NSL+ C G ID+ + M S G +PD +SYSIFI+
Sbjct: 130 AGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFING 189
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ I + D M +VPN TYN +I+ LC+ + +A L +M G +PD
Sbjct: 190 YCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPD 249
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C + ++ L L M + V PD Y +++ + R + A EV
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLS 309
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G P V TY+ +V GLC ++G + EA + F M ++G P S + +L
Sbjct: 310 RLIVEGLKPDVHTYTALVDGLC-REGSIIEALRLFRKMEEDGCMPGSCSYNVL 361
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + L+ C + + KV F P V +YSI + G V ++ EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDEM R + + +N+L++A+C+A +A + R+M + G PD +YS +
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ ++ + + M+R + P++ Y II +C++ KV++A ++L +I G PD
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ C + ALRL +M ++ MP +YN++L+ ++ ++
Sbjct: 320 VHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIH 379
Query: 244 SMEKRGFYPSVSTYSVM 260
M RGFY T + +
Sbjct: 380 EMADRGFYADAVTRTFL 396
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP +Y ++ CK + + A + FD H P TY+ L++ L
Sbjct: 171 MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALR 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A+ LF +M DILA+++LL+ CK GN+DE + +EM+ +PD Y+I
Sbjct: 231 PRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTI 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + + VL + L P+V TY ++ LC+ + EA +L +M E G
Sbjct: 291 IINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
P SYN +L + + ++LI M D T
Sbjct: 351 CMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT 392
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 1/264 (0%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G G L +A F+ ML+R I+ N LL ++ + + + +EM G + +
Sbjct: 16 GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ SI I+ FC + + F V + P+V + +I +C+ K E A LL E
Sbjct: 76 CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M G PD + N+++ +C + +++ ++ M + + PD ++Y++ + +V +
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D A E+++ M RG P+ TY+ ++ LC+ + +A F M G+ P
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQAL-RPRDAQVLFRKMCACGLSPDILAYS 254
Query: 295 MLRNRLVGLGFLDIIEILADKMER 318
L + G LD + +L +M+R
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQR 278
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF EM R ++ + L+ C ++D + + G +PD ++ I C
Sbjct: 62 LFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVC 121
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+L M VP+V T N ++R C K+++ ++ M+ +G PD +
Sbjct: 122 RIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVY 181
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY+ + +C +++ A+ L M+ V+P+ TYN ++K L + R A ++ M
Sbjct: 182 SYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKM 241
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G P + YS ++ G C K+G L+E F+ M + P
Sbjct: 242 CACGLSPDILAYSTLLDGFC-KQGNLDEMLVLFQEMQRRLVKP 283
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 155/307 (50%), Gaps = 4/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +G+KP + D ++L+ LCK K V+ AH+ FD K P +K+Y+IL+ G
Sbjct: 180 MEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQN 239
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + ++ EM ++ +D++A+ ++ A CKA DEA G+ EM++ G P Y
Sbjct: 240 LIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCT 299
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + K VP TYN ++ C + ++++AY+++ EM + G
Sbjct: 300 LINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCG 359
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMT--KENVMPDRHTYNMVLKLLVRVGRFDR 237
P+ +++ +L + + A + RM + P TY +++++ D
Sbjct: 360 IGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDM 419
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A VW+ M+ +G P + +S +V LC + KL+EACKYF+ M+D GI P + L+
Sbjct: 420 AVAVWDEMKGKGILPGMHMFSTLVCALC-HESKLDEACKYFQEMLDVGIRPPAKMFSTLK 478
Query: 298 NRLVGLG 304
LV G
Sbjct: 479 EALVDAG 485
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G++PS + L++ L K + A +FF+ +K F P TY+ +V + +A
Sbjct: 289 GVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDA 348
Query: 64 RKLFDEMLERKCPV-------DILAHNSLLEAMCKAGNIDEAHGMLREMRS--IGAEPDA 114
++ EM +KC + DI+ H+ + K I+EA + R M G EP
Sbjct: 349 YRMVGEM--KKCGIGPNSRTFDIVLHH-----LIKGRRIEEASSVFRRMNGGEFGCEPSV 401
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+Y I + FC + V D MK ++P + ++ ++ LC K++EA + E
Sbjct: 402 STYEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQE 461
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
M++ G P ++ + D ++A+ ++ K P
Sbjct: 462 MLDVGIRPPAKMFSTLKEALVDAGMEHVAMHFTLKIDKLRKSP 504
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 158/327 (48%), Gaps = 3/327 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT-YSILVRGLGDVGE 59
M++ G +P++ LL LCK +K A F + P Y++L+ G G+
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF+EMLE+ C + +NSLL + G + ++M G P+ F+++
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ D+ R+ M+ P+V +YN ++R +C K EA +LL EMI G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ + ++ A++L + K + PD +Y+ ++ L R G+ A
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V++ M G P + +V GLC+ + +L E+C+ F+ MV P +L +
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGE-RLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 300 LVGLGFL-DIIEILADKMERSTSCTIQ 325
L D+ EI + ER S ++
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVE 438
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 149/296 (50%), Gaps = 6/296 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M G P+++ L+ LC+ + V A + + + H+ P V TY L+ GL +
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ--PNVVTYGSLLSGLCKM 135
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L EA LF M+ R CP D + +N L++ K G++ EA+ + EM G P F+Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + F + V + M R VPN+FT+N ++ CK + EA++L EM
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD SYN ++ C + + + A RL+ M + V PD +YN+++ + G D
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
A +++ + K G P +YS ++ LC + GK+ A F+ M+ G P ++ V
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLC-RAGKVGAAFVVFKDMIANGSAPDAAVV 370
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P+++ + LL ++ +V F D + P + T++ L+ G +G+
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF EM CP D++++N+L+ MC G EA +LREM G PD SY+I
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++ + ++ + + L P+ F+Y+ II LC+ KV A+ + +MI G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ PD ++ C + + L M K +P YN+++ L + R D
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
E++ + +RGF P V V++ L
Sbjct: 423 EIFHELTERGFSPDVEISKVILETL 447
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+Y+ L+ L G +++ML C + + LL ++C+A +EA + R M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G P+ FSYSI I C + +L+ M PNV TY ++ LCK K+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+EA L M+ RG PD YN ++ + ++ A RL M ++ +P TYN +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L R G F R +++ M ++G P++ T++ ++ G C K G + EA + F M G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC-KMGDMVEAHRLFLEMRSLG 257
Query: 286 IPP 288
PP
Sbjct: 258 CPP 260
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L++N LLE + K+G D +G +M G P+ ++Y + + C+A V
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M PNVF+Y+ +I LC+ +KV+EA +LL+EMI+ G P+ +Y ++L+ C +
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ A+ L +RM PD YN+++ + G A ++E M ++G P+V TY+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
++ G +KG+ F+ M+ +G P T L + +G D++E
Sbjct: 198 LLSGF-SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMG--DMVE 245
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TY L+R L EAR +F M + C ++ +++ L+ +C+ +DEA
Sbjct: 49 VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAE 108
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L EM G +P+ +Y + C+ + + M P+ YN +I
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + EAY+L +EM+E+G P ++YN++L+ + E L M ++ +P+
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
T+N +L ++G A ++ M G P V +Y+ ++ G+C KGK EA +
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC-SKGKPHEAQRLLRE 287
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+ G+ P + +L + G LD
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALD 314
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 36/204 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G P + + L+ +C + A + + + P + +Y+IL+ G G
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF---- 115
L A KLF E+ + D +++++++ +C+AG + A + ++M + G+ PDA
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 116 -------------------------------SYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
Y++ ++ C+A V + +
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEA 168
P+V I+ L +++ E A
Sbjct: 433 FSPDVEISKVILETLRRSDDKEAA 456
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 162/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G + + LL AL + + A+Q FD + + P +++Y+ L+ + L
Sbjct: 27 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNL 86
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 87 VEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTML 146
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + R + M+ P+V TY C++ ++++ LL+EM ++G
Sbjct: 147 IRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGC 206
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-FDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K GR +
Sbjct: 207 PPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGC 266
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
VWE M ++G P V++Y+V ++G + G+ EEACKY E M+ +G+
Sbjct: 267 AVWEEMHRKGICPDVNSYTVFINGHI-RHGRPEEACKYIEEMIQKGMKTPQIDYNKFAAD 325
Query: 300 LVGLGFLDIIEILADKME 317
G DI+ LA K++
Sbjct: 326 FSKAGKPDILYELAQKVK 343
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
++ I I +F A +I + V + M+ + V ++NC++ L + EA Q+ D M
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+R A PD SY A++ C+ + A R+ M + + PD +N +++ L+R R
Sbjct: 63 RDRYA-PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRR 121
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A +++E M+ +G P+V TY++++ C K+GK++ A + FE M D G P +T
Sbjct: 122 PEAVKMFELMKAKGPAPNVWTYTMLIRDHC-KRGKMDMAMRCFEEMQDVGCQPDVATYTC 180
Query: 296 LRNRLVGLGFLDIIEILADKMERSTS 321
L LVG G A +M+R T+
Sbjct: 181 L---LVGYGN-------AKRMDRVTA 196
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 2/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+E G+KP + + ++ L + + A + F+ K + P V TY++L+R G+
Sbjct: 96 MLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGK 155
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F+EM + C D+ + LL A +D +L EM G PD +Y+
Sbjct: 156 MDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNA 215
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I N R+ M + L P + TYN +++ + +EM +
Sbjct: 216 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRK 275
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD SY + H A + I M ++ + + YN + G+ D
Sbjct: 276 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDIL 335
Query: 239 TEVWESMEKRGFYPSVSTY 257
E+ + ++ G + + + +
Sbjct: 336 YELAQKVKFTGKFDASNVF 354
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 9/300 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS L+ L+ LC + VK A F D F Y L+ G+ +G+ A
Sbjct: 123 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAA 182
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ R D++ ++++++A+CK + EA+G+ EM G D +Y+ I+
Sbjct: 183 IKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYG 242
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA-------YQLLDEMI 176
FC + +L+ M + P+V+TY ++ LCK KV+EA + L+DEM
Sbjct: 243 FCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMR 302
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG D +Y++++ C ++ A+ L +M + + P+ T+ ++L L + GR
Sbjct: 303 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLK 362
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A EV++ + +G++ +V TY+VM++G C K+G LEEA M D G P + T E +
Sbjct: 363 DAQEVFQDLLTKGYHLNVYTYNVMINGHC-KQGLLEEALTMLSKMEDNGCIPNAFTFETI 421
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 154/323 (47%), Gaps = 15/323 (4%)
Query: 8 PSIYDLDQLLHALCKRKH---VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
P I +++L + K KH V ++H+ P + T +IL+ +G+++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTVSLSHRL---ELKGIQPDLFTLNILINCFCHMGQITFGF 113
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ ++L+R P + N+L++ +C G + +A ++ + G + + Y I+
Sbjct: 114 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGV 173
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D + ++L + P+V Y+ II LCK + V EAY L EM +G + D
Sbjct: 174 CKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 233
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD----RATE 240
+YN ++ C ++ A+ L+ M + + PD +TY +++ L + G+ R +
Sbjct: 234 VTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISY 293
Query: 241 VW---ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
VW + M RG V TYS ++ GLC K G L+ A F M D+GI P T +L
Sbjct: 294 VWDLIDEMRDRGQPADVITYSSLIDGLC-KNGHLDRAIALFNKMKDQGIRPNMFTFTILL 352
Query: 298 NRLVGLGFL-DIIEILADKMERS 319
+ L G L D E+ D + +
Sbjct: 353 DGLWKGGRLKDAQEVFQDLLTKG 375
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 125/252 (49%), Gaps = 8/252 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP + ++ ALCK + V A+ F + + V TY+ L+ G VG+L EA
Sbjct: 195 KPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIG 254
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH-------GMLREMRSIGAEPDAFSYS 118
L + M+ + D+ + L++A+CK G + EA ++ EMR G D +YS
Sbjct: 255 LLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYS 314
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ + + + MK + PN+FT+ ++ L K ++++A ++ +++ +
Sbjct: 315 SLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTK 374
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G + + ++YN ++ HC + + AL ++++M +P+ T+ ++ L + D+A
Sbjct: 375 GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKA 434
Query: 239 TEVWESMEKRGF 250
++ M RG
Sbjct: 435 EKLLRQMIARGL 446
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI + + L++ C +K A + P V TY+ILV L G++ EA
Sbjct: 228 GISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEA 287
Query: 64 RK-------LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
++ L DEM +R P D++ ++SL++ +CK G++D A + +M+ G P+ F+
Sbjct: 288 KRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFT 347
Query: 117 YSIFIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++I + + D VF+ L + K Y+L NV+TYN +I CK +EEA +L
Sbjct: 348 FTILLDGLWKGGRLKDAQEVFQDLLT-KGYHL--NVYTYNVMINGHCKQGLLEEALTMLS 404
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+M + G P+ +++ I+ + E + A +L+ +M ++
Sbjct: 405 KMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M ++G+ P + +++ LCKR A D P V YS L+ G G
Sbjct: 304 MEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGN 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K+ EM + + +++L+ +CK G + A +L++M IG D +Y++
Sbjct: 364 ADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNL 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I ++ F +L+ M++ + PNV+TY+ II LC+ + E A LL++MI G
Sbjct: 424 VIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y +++ +C ++A + +MT+EN+ PD + YN ++ L VG+ D A
Sbjct: 484 LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E ++ M ++GF P+ TY ++HG G LE+A + M++ G+ P
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGY-SMAGNLEKAEQLLHQMLNSGLNP 591
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 154/291 (52%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ---FFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G+ PS+ + LL L + + + + F + A +P V TYS L+ V
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAG--ISPDVYTYSTLIEAYCKV 256
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+L A+K+ +EM E C ++++ +N+L+ +C+AG I+EA G +EM G PD F+Y
Sbjct: 257 RDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTY 316
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ C+ +LD M L+PNV Y+ +I + +EA++++ EM
Sbjct: 317 GAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSA 376
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P++ +Y+ ++ C + A R++ +MTK M D TYN+V++ +R +
Sbjct: 377 AGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEE 436
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A + M K G P+V TYS++++GLC + G+ E A E M+ +G+ P
Sbjct: 437 AFLLLNEMRKGGISPNVYTYSIIINGLC-QIGESERASGLLEQMIADGLKP 486
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 6/299 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
GI P +Y L+ A CK + ++ A + + + + V TY+ L+ GL G + EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
EM + D + +++ +CK G D+A +L EM G P+ YS I
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + F+++ M + PN TY+ +IR LCK ++ A ++L +M + G D
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ H + A L+ M K + P+ +TY++++ L ++G +RA+ + E
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
M G P+ Y+ ++ G C ++G AC+ + M E + P Y+S + L N
Sbjct: 478 QMIADGLKPNAFVYAPLISGYC-REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSN 535
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 161/375 (42%), Gaps = 76/375 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+KP+ + L+ C+ +A + E TP + Y+ L+ GL +VG+
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS- 118
+ EA + +DEMLE+ + + L+ AGN+++A +L +M + G P+ F Y+
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598
Query: 119 ----------------------------------IFIHAFCEANDIHSVFRVLDSMKRYN 144
I IH + + + VL +++
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL------------- 191
LVP+ Y +I CK +E+A LLDEM ++G P YNA++
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718
Query: 192 ----------------AY------HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
Y +C ++ A+ L M E V PD Y+++
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
G +A + E M RG Y +S+++ +VHG C K+GKL+E K+ +M+D+ I P
Sbjct: 779 SNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFC-KRGKLQETVKFLHVMMDKDIVPS 836
Query: 290 SSTVEMLRNRLVGLG 304
TVE N ++GLG
Sbjct: 837 LLTVE---NIVIGLG 848
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 2/291 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P+ D L+ LCK + A + K + TY++++ G
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM + ++ ++ ++ +C+ G + A G+L +M + G +P+AF Y+
Sbjct: 434 KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAP 493
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C L M R NL P+++ YN +I L K++EA + DEM+E+G
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++++Y ++ + + A +L+ +M + P+ Y +L+ + ++ +
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVS 613
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+SM ++G P Y +++H L G ++ A ++ G+ P S
Sbjct: 614 STLKSMLEKGLMPDNRLYGIVIHNL-SSSGHMQAAVSVLSVIEKNGLVPDS 663
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K +P V TYSI++ GL +GE A L ++M+ + + L+ C+ G+
Sbjct: 446 KGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFS 505
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A L++M PD + Y+ I + D M PN FTY +I
Sbjct: 506 LACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLI 565
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+E+A QLL +M+ G NP+++ Y IL + + + M ++ +M
Sbjct: 566 HGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLM 625
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD Y +V+ L G A V +EK G P Y ++ G C K +E+A
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC-KAADMEKAVG 684
Query: 277 YFEMMVDEGIPP 288
+ M +GI P
Sbjct: 685 LLDEMAKKGIEP 696
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 24/304 (7%)
Query: 23 RKHVKVAHQFFDNAKHEFTPTVKT---YSILVRGLGDVGELSEARKLFDEMLERKCPVDI 79
R H K+ FF ++ P+ ++ L L G +A L D+M+ R P
Sbjct: 96 RLHPKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMI-RAYPTPP 154
Query: 80 LAHNSLLEAMC-------------------KAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
L +S+ A+ K G + + ++ M+ +G P +
Sbjct: 155 LVLSSVHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGL 214
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ A+ + +++V M+ + P+V+TY+ +I CK +E A ++++EM E G
Sbjct: 215 LKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGC 274
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ + +YN ++ C + A M ++PD TY ++ L + GR D+A
Sbjct: 275 SLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKC 334
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M G P+V YS ++ G ++G +EA K + M G+ P T + L L
Sbjct: 335 LLDEMSCAGLMPNVVVYSTLIDGF-MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393
Query: 301 VGLG 304
LG
Sbjct: 394 CKLG 397
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 51/280 (18%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P L+ CK ++ A D AK P + Y+ L+ G ++S A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF--- 120
R +F+ ++ + P + + + +L++ CKAG+I +A + EM + G PDAF YS+
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777
Query: 121 -------------------------------IHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
+H FC+ + + L M ++VP++
Sbjct: 778 CSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
T I+ L + K+ EA+ + E+ ++ A+ H D ++ L T
Sbjct: 838 LTVENIVIGLGEAGKLSEAHTIFVELQQKNAS------------HRDTDHLS---SLFTD 882
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
M + ++P +NM+ + + G D+A + +++ +G
Sbjct: 883 MINQGLVPLDVIHNMI-QSHCKQGYLDKALMLHDALVAKG 921
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 141/268 (52%), Gaps = 1/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV I P++ + L+ LC +K A E PTV T+SILV G+
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ +F M+++ +I+ +NSL+ C +++A + M IG PD SYSI
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + ++ + M + P+V TYN +I LCK+ ++ A +L+ EM +RG
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN++L C V+ A+ L+T++ N+ P TYN+++ L + GR A
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+V+E + G+ V TY+ M+ G CKK
Sbjct: 475 KVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 161/333 (48%), Gaps = 8/333 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P L L+ LC + + A F D F +Y L+ GL VG+ A
Sbjct: 134 GYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAA 193
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ + + +D++ +N++++ +CK +++A EM + P +Y+ I
Sbjct: 194 LEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICG 253
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +L M N+ P V+T++ ++ CK KV+EA + M+++ P+
Sbjct: 254 LCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPN 313
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ +C EVN A + M + V PD H+Y++++ ++ D A +++E
Sbjct: 314 IVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFE 373
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RN 298
M + +P V TY+ ++ GLC K G++ A K M D G PP Y+S ++ L +N
Sbjct: 374 EMHCKQIFPDVVTYNSLIDGLC-KSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
V ++++ L D + + CT L N +
Sbjct: 433 HHVDKA-IELLTKLKDHNIQPSVCTYNILINGL 464
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 157/327 (48%), Gaps = 7/327 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGELSEARKLFDEML-ER 73
L++ LCK K A + + V Y+ ++ G+ +++A + EM+ +R
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
CP ++ +N+L+ +C G + +A G+L +M P +++SI + AFC+ +
Sbjct: 240 ICPT-VVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
V M + ++ PN+ TYN ++ C +V +A + + M + G PD SY+ +++
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C V+ A++L M + + PD TYN ++ L + GR A ++ M RG P+
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEIL 312
+ TY+ ++ LCK +++A + + D I P T +L N L G L D ++
Sbjct: 419 IITYNSLLDALCKNH-HVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVF 477
Query: 313 ADKMERSTSCTIQELANAMRG--KTGF 337
D + + + ++G K GF
Sbjct: 478 EDVLVNGYNIDVYTYNTMIKGFCKKGF 504
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++ L L++ + H ++ F N K + P T + L++GL G++ +A
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L ++ +++ +L+ +CK G A MLR + D Y+ I
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG 218
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ F M + P V TYN +I LC ++++A LL +MI NP
Sbjct: 219 VCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPT 278
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++++ ++ C +V A + M K++V P+ TYN ++ V ++A ++
Sbjct: 279 VYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFN 338
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+M + G P V +YS+M+ G CK K ++EA K FE M + I P Y+S ++ L
Sbjct: 339 TMAQIGVAPDVHSYSIMISGFCKIK-MVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 114/201 (56%), Gaps = 1/201 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KP+I + L++ C V A F+ A+ P V +YSI++ G +
Sbjct: 305 MMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKM 364
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF+EM ++ D++ +NSL++ +CK+G I A ++ EM G P+ +Y+
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L +K +N+ P+V TYN +I LCK+ ++++A ++ ++++ G
Sbjct: 425 LLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNG 484
Query: 180 ANPDEWSYNAILAYHCDRAEV 200
N D ++YN ++ C + V
Sbjct: 485 YNIDVYTYNTMIKGFCKKGFV 505
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 1/258 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP++ + ++ L S L +M +++ + L+ + G+ +
Sbjct: 66 TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFS 125
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ + G EPDA + + I C DIH D + N +Y +I LC
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + + A ++L + + D YN I+ C VN A + M + + P
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN ++ L +G+ A + M P+V T+S++V C K+GK++EA F +
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFC-KEGKVKEAKNVFVV 304
Query: 281 MVDEGIPPYSSTVEMLRN 298
M+ + + P T L N
Sbjct: 305 MMKKDVKPNIVTYNSLMN 322
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G P I+ + L+ LCK+ ++ A + + + + P V TY+IL+ G
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR + DEM + ++ + +N L+ A+CK + +A M +M S G +PD F+++
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ N + M ++ N TYN +I + ++EA +L+++M+ RG
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN ++ C + L L M + + P+ + N+++ L R G A
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E M RG P + TY+ +++GLC K G+ +EA F+ + EGI P + T L
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLC-KTGRAQEALNLFDKLQVEGICPDAITYNTL 300
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP I+ + L+ LCK + A + + E TY+ L+ G + EA
Sbjct: 114 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 173
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ML R CP+D + +N L++A+C+AGNI++ + +M S G P+ S +I I+
Sbjct: 174 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 233
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C +I L M L P++ TYN +I LCK + +EA L D++ G PD
Sbjct: 234 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 293
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+YN ++++HC + A L++R +P+ T+ +++ ++ G
Sbjct: 294 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 4/272 (1%)
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+ ML C DI +N+L+ +CK G + A ++ EM+ G EP+ +Y+I I FC+
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ VLD M L N YNC+I LCK+EKV++A + +M +G PD +++
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N+++ C + AL L M E V+ + TYN ++ +R G A ++ M
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RG TY+ ++ LC + G +E+ FE M+ +G+ P + + +L N L G +
Sbjct: 183 RGCPLDDITYNGLIKALC-RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241
Query: 308 -IIEILADKMERSTSCTIQELANAMRG--KTG 336
+E L D + R + I + + G KTG
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 273
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ + + L+ ALCK + V+ A + F D + P + T++ L+ GL V + EA
Sbjct: 79 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 138
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+ +ML + + +N+L+ A + G + EA ++ +M G D +Y+ I A
Sbjct: 139 LGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKA 198
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A +I + + M L PN + N +I LC+ ++ A + L +MI RG PD
Sbjct: 199 LCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 258
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C AL L ++ E + PD TYN ++ + G FD A +
Sbjct: 259 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKK 267
GF P+ T+ ++V K+
Sbjct: 319 RGVDSGFIPNEVTWYILVSNFIKE 342
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L++ LC+ +++ A +F + H TP + TY+ L+ GL G
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 274
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
EA LFD++ +E CP D + +N+L+ CK G D+AH +L G P+ ++
Sbjct: 275 AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWY 333
Query: 119 IFIHAFCEAND 129
I + F + D
Sbjct: 334 ILVSNFIKEGD 344
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ--FFDNAKHEFTPTVKTYSILVRGLGDVG 58
M E G+ P++ L+ L+ ALC+ A F + K P TY L+ GL G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA+KLF EM+E+ C ++ + SL+ +C + N+DEA + EM+ G EP+ F+YS
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYS 266
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + + M PN+ TY +I LCK +K++EA +LLD M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--- 235
G PD Y +++ C ++ A + M + P+R T+N+ +K V R
Sbjct: 327 GLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCT 386
Query: 236 ---DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
RA ++ SM RG V T +V LC KKG+ ++A + + +V +G P T
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLDSLVKCLC-KKGEFQKAVQLVDEIVTDGCIPNKGT 445
Query: 293 VEML 296
++L
Sbjct: 446 WKLL 449
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 19/300 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV----KTYSILVRGLGDVGELS 61
I PS Q++ + K V+ + FD+A E+ ++ +V L +
Sbjct: 14 ITPS-----QVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFK 68
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKA-GNIDEAHGMLR---EMRSIGAEPDAFSY 117
A + M C V +L ++C+ G + LR +M+ +P +Y
Sbjct: 69 AAEDIVARMKIENCVV----SEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAY 124
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE-KVEEAYQLLDEMI 176
+ E N ++ F+ +M+ L P V + N +I+ LC+N+ V+ ++ EM
Sbjct: 125 VTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMP 184
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG +PD ++Y +++ C ++ A +L T M +++ P TY ++ L D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A E M+ +G P+V TYS ++ GLC K G+ +A + FEMM+ G P T L
Sbjct: 245 EAMRYVEEMKGKGIEPNVFTYSSLMDGLC-KDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE P++ L++ LC K+V A ++ + K + P V TYS L+ GL G
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGR 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF+ M+ R C +++ + +L+ +CK I EA +L M G +PDA Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN-------------------------- 153
I FC + LD M + PN T+N
Sbjct: 338 VISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYL 397
Query: 154 ---------------CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+++ LCK + ++A QL+DE++ G P++ ++ ++ + D
Sbjct: 398 SMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNT 457
Query: 199 EVNMA 203
V A
Sbjct: 458 IVGEA 462
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
+LR+ +M + P + Y VL +LV + + A + +++M + G P+V++ +V++
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTS 321
LC+ G ++ K F M G P S T L + L G +D + L +M E+ +
Sbjct: 165 ALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 322 CTIQELANAMRGKTG 336
T+ + + G G
Sbjct: 225 PTVVTYTSLINGLCG 239
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 170/311 (54%), Gaps = 5/311 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK---RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGD 56
M +KP++ + L++AL + + V ++ F D K T++IL+ G
Sbjct: 165 MKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCI 224
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+LSEA L +M + C D +++N++L+ +CK G ++EA +L +M++ G P+ +
Sbjct: 225 ENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNT 284
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
++I + +C+ + +V+D M + N++P+V+TYN +I LCK+ K++EA++L DEM
Sbjct: 285 FNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEME 344
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
PD +YN ++ D + LI +M + V P+ TYN+V+K V+ G+ D
Sbjct: 345 NLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMD 404
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ME+ GF P T++ +++G C K G+L EA + + M +G+ S T+ +
Sbjct: 405 NAGNELRKMEESGFSPDCVTFNTLINGYC-KAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 463
Query: 297 RNRLVGLGFLD 307
+ L G LD
Sbjct: 464 LHTLCGERKLD 474
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 155/309 (50%), Gaps = 4/309 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + + P ++ + L+ LCK + A + D ++ + P V TY+ L+ G D
Sbjct: 308 MAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSS 367
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +L D+M + + + +N +++ K G +D A LR+M G PD +++
Sbjct: 368 SLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 427
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+A + FR++D M R L N T N I+ LC K+++AY+LL +RG
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487
Query: 180 ANPDEWSYNA-ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
DE SY I+ Y D V A++L M ++ ++P TYN ++ L G+ D++
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVE-AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS 546
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + + G P +TY+ ++ G C ++G++E+A ++ MV + P T +L
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYC-REGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605
Query: 299 RLVGLGFLD 307
L G LD
Sbjct: 606 GLCTEGMLD 614
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 9/279 (3%)
Query: 34 DNAKHE--------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
DNA +E F+P T++ L+ G G LSEA ++ DEM + ++ + N++
Sbjct: 404 DNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 463
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
L +C +D+A+ +L G D SY I + + ++ D MK +
Sbjct: 464 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEI 523
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P++ TYN +I LC + K +++ L+E++E G PDE +YN I+ +C +V A +
Sbjct: 524 IPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQ 583
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+M K++ PD T N++L+ L G D+A +++ + +G TY+ ++ GLC
Sbjct: 584 FHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLC 643
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K+ + EEA M ++ + P T + + L G
Sbjct: 644 KED-RFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAG 681
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +F P + +L LCK+ + A D + P T++ILV G +G
Sbjct: 238 MKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGW 297
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ D M + D+ +N L+ +CK G IDEA + EM ++ PD +Y+
Sbjct: 298 LKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNT 357
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + F ++D M+ + PN TYN +++ K K++ A L +M E G
Sbjct: 358 LINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG 417
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++N ++ +C ++ A R++ M+++ + + T N +L L + D A
Sbjct: 418 FSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY 477
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ S KRG++ +Y ++ G K GK EA K ++ M ++ I P
Sbjct: 478 KLLSSASKRGYFVDEVSYGTLIMGYF-KDGKSVEAMKLWDEMKEKEIIP 525
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 145/334 (43%), Gaps = 59/334 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+K + L+ +LH LC + + A++ +A K + +Y L+ G G+
Sbjct: 448 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL+DEM E++ I+ +N+++ +C +G D++ L E+ G PD +Y+
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT---------------------------- 151
I +C + F+ + M + + P++FT
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKG 627
Query: 152 -------YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
YN II LCK ++ EEA+ LL EM E+ PD ++YNAIL+ D + A
Sbjct: 628 KAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAE 687
Query: 205 RLITRMTKENVM-----------------------PDRHTYNMVLKLLVRVGRFDRATEV 241
++R+ ++ + P+ T++ + L G++ A +
Sbjct: 688 EFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHM 747
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
+ ++G STY ++ GL K++ + +C
Sbjct: 748 VQESTQKGITLHKSTYISLMEGLIKRRKSISRSC 781
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY---QLLDEMIE 177
I A+ N H ++ + MKR +L PN+ T N +I L + Y + ++I+
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + ++N ++ C +++ A+ LI +M + PD +YN +L +L + G+ +
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ M+ G P+ +T++++V G C K G L+EA + ++M + P T ML
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYC-KLGWLKEAAQVIDLMAQNNVLPDVWTYNMLI 324
Query: 298 NRLVGLGFLDIIEILADKME 317
L G +D L D+ME
Sbjct: 325 GGLCKDGKIDEAFRLKDEME 344
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 162/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G + + LL AL + + A+Q FD + + P +++Y+ L+ + L
Sbjct: 281 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNL 340
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 341 VEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTML 400
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + R + M+ P+V TY C++ ++++ LL+EM ++G
Sbjct: 401 IRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGC 460
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-FDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K GR +
Sbjct: 461 PPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGC 520
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
VWE M ++G P V++Y+V ++G + G+ EEACKY E M+ +G+
Sbjct: 521 AVWEEMHRKGICPDVNSYTVFINGHI-RHGRPEEACKYIEEMIQKGMKTPQIDYNKFAAD 579
Query: 300 LVGLGFLDIIEILADKME 317
G DI+ LA K++
Sbjct: 580 FSKAGKPDILYELAQKVK 597
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 15/243 (6%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP-DAFSYSIFIHAFCEANDIHSVFRVLD 138
+ + ++ + KA +++EM GA DAF I I +F A +I + V +
Sbjct: 222 ITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFK--IAIKSFAAAGEIKNAVGVFE 279
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M+ + V ++NC++ L + EA Q+ D M +R A PD SY A++ C+
Sbjct: 280 MMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA-PDLRSYTALMLAWCNAR 338
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ A R+ M + + PD +N +++ L+R R A +++E M+ +G P+V TY+
Sbjct: 339 NLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYT 398
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+++ C K+GK++ A + FE M D G P +T L LVG G A +M+R
Sbjct: 399 MLIRDHC-KRGKMDMAMRCFEEMQDVGCQPDVATYTCL---LVGYGN-------AKRMDR 447
Query: 319 STS 321
T+
Sbjct: 448 VTA 450
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 2/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+E G+KP + + ++ L + + A + F+ K + P V TY++L+R G+
Sbjct: 350 MLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGK 409
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F+EM + C D+ + LL A +D +L EM G PD +Y+
Sbjct: 410 MDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNA 469
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I N R+ M + L P + TYN +++ + +EM +
Sbjct: 470 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRK 529
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD SY + H A + I M ++ + + YN + G+ D
Sbjct: 530 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDIL 589
Query: 239 TEVWESMEKRGFYPSVSTY 257
E+ + ++ G + + + +
Sbjct: 590 YELAQKVKFTGKFDASNVF 608
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 43/340 (12%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGEL 60
V G +P + + L++ LCK H K A + D P + TY+ L+ GL +GE+
Sbjct: 300 VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEI 359
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR----------------- 103
EA K+ D+M+ R C + + +N+++ ++CK +DEA + R
Sbjct: 360 EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL 419
Query: 104 ------------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
EM+ G PD F+Y++ I + C + + +L M+
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
NV YN +I CKN+++EEA ++ DEM +G + D +YN ++ C V A +
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ +M E + PD+ TYN +L + G +A ++ ++M G P + TY+ ++ GLC
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599
Query: 266 KKKGKLEEACKYFEMMVDEG--IPP--YSSTVEML--RNR 299
K G+++ A + + +G + P Y+ ++ L RNR
Sbjct: 600 -KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV I+ + + L+ ALCK V+ A + + +P T++ +++G + G
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ ++M+E CP + N L+ CK G ID+A ++E S G PD F+Y+
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ V+D+M L P+++TYN +I LCK ++EEA ++LD+M+ R
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YNAI++ C V+ A + +T + ++PD T+N +++ L A
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++E M+ +G P TY++++ LC + KLEEA + M
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSR-KLEEALNLLKEM 474
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE+G + ++ L++ CK+ + A F A E F P TY+ LV GL +G
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A ++ D ML DI +NSL+ +CK G I+EA +L +M S P+A +Y+
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ N + + + ++P+V T+N +I+ LC + + A L +EM +G
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE++YN ++ C ++ AL L+ M + YN ++ + R + A
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAE 503
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+++ ME +G TY+ ++ GLCK K ++E+A + + M+ EG+ P
Sbjct: 504 EIFDEMELQGVSRDSVTYNTLIDGLCKSK-RVEDAAQLMDQMIMEGLRP 551
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 4/337 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
GI P + + L+ LC + K A F+ K + P TY++L+ L +L EA
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM C +++ +N+L++ CK I+EA + EM G D+ +Y+ I
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + +++D M L P+ FTYN ++ CK +++A ++ M G NPD
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +++ C V +A RL+ + + ++ H YN V++ L + R A ++
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVG 302
M + P TY ++ GLC G + EA + M++ G IP +SS V ML L
Sbjct: 648 EMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV-MLAEGLCT 706
Query: 303 LGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRK 339
L D + L D + + +E++ +RG RK
Sbjct: 707 LSMDDTLVKLVDMIMEKAKFSEREIS-TIRGFLKIRK 742
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 36/299 (12%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
++ P + Y++L+ L D +L M+ R+ D+ N L++A+CKA +
Sbjct: 161 EYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVR 220
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY------------- 143
A M+ EM S G PD +++ + + E ++ R+ + M Y
Sbjct: 221 PAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLI 280
Query: 144 ----------------------NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
P+ FTYN ++ LCK + A +++D M+ G +
Sbjct: 281 NGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLD 340
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++YN++++ C E+ A++++ +M + P+ TYN ++ L + R D ATE+
Sbjct: 341 PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ +G P V T++ ++ GLC + A FE M +G P T ML + L
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNH-KSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 153/366 (41%), Gaps = 43/366 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARK 65
P + QL+ L ++ A + F+ A + F P+ Y ++R LG G R+
Sbjct: 59 PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 118
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYSIFIHAF 124
+ +EM C D +E+ K DE G+++ M +PD Y++ ++
Sbjct: 119 VLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVL 178
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+AN + V SM R + +V T+N +I+ LCK +V A +++EM G +PDE
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238
Query: 185 WSYNAILAYH-----------------------------------CDRAEVNMALRLITR 209
++ I+ + C + ++ AL I
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
E PD+ TYN ++ L ++G A EV ++M G P + TY+ ++ GLC K G
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC-KLG 357
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADKMERSTSCTIQ 325
++EEA K + MV P + T + + L +D I +L K CT
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417
Query: 326 ELANAM 331
L +
Sbjct: 418 SLIQGL 423
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G P I L+ LCK V+VA + + + + T Y+ +++ L
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN-IDEAHGMLREMRSIGAEPDAFSYS 118
EA +LF EML++ P D + + + +C G I EA EM G P+ S+
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV 698
Query: 119 IFIHAFCEANDIHSVFRVLD 138
+ C + ++ +++D
Sbjct: 699 MLAEGLCTLSMDDTLVKLVD 718
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGD 56
M E G P ++ + L+ LC K + A + + + +P V +YS ++ G
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFK 215
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
GE+ +A LFDEM+ + P D++ ++SL++ +CKA +++A +L+ M G P+ +
Sbjct: 216 EGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRT 275
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I I +C + R+L M L P+V TY +I+ CK + EA + D M+
Sbjct: 276 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G P+ Y+ +L + + + L+ M ++ + + +N+++ + G D
Sbjct: 336 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 395
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+A + M + G P V +YS ++H LC K G++E+A +F MV EG+ P + L
Sbjct: 396 KAMTAFTEMRQNGLRPDVVSYSTVIHILC-KIGRVEDAVYHFNQMVSEGLSPNIISFTSL 454
Query: 297 RNRLVGLGFLDIIEILADKM 316
+ L +G +E LA +M
Sbjct: 455 IHGLCSIGEWKKVEELAFEM 474
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 155/340 (45%), Gaps = 37/340 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G++P + ++H LCK V+ A F+ E +P + +++ L+ GL +GE
Sbjct: 404 MRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE 463
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +L EM+ R D + N++++ +CK G + EA + IG +P+ SY+
Sbjct: 464 WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNT 523
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE----- 174
I +C + + D M L P+ +TYN ++ KN +VE+A L E
Sbjct: 524 LIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKD 583
Query: 175 ------------------------------MIERGANPDEWSYNAILAYHCDRAEVNMAL 204
M++RG +YN +L C+ + V+ AL
Sbjct: 584 VKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 643
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ + + D T+N+V+ L++VGR D A ++ +M RG P V TYS+M+
Sbjct: 644 RMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSR 703
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++G LEE+ F M G S + ++ RL+ G
Sbjct: 704 I-EEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKG 742
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML-REMR 106
IL+R VG L A F L+ V + N L++ +C D+A M+ R M
Sbjct: 98 GILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMP 157
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR---YNLVPNVFTYNCIIRKLCKNE 163
+G PD FSY+ I C +L M YN PNV +Y+ II K
Sbjct: 158 ELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEG 217
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+V++AY L DEMI +G PD +Y++++ C +N A ++ M + VMP+ TYN
Sbjct: 218 EVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYN 277
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++++ +G+ + A + + M G P V TY +++ C K G+ EA F+ MV
Sbjct: 278 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYC-KIGRCAEARSVFDSMVR 336
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+G P S+ +L + G L + L D M R
Sbjct: 337 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 371
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 43/337 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF----TPTVKTYSILVRGLGD 56
M+ G P + L+ LCK + + A +H F P +TY+I++RG
Sbjct: 229 MIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAIL---QHMFDKGVMPNTRTYNIMIRGYCS 285
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+G+L EA +L +M D++ + L++ CK G EA + M G +P++
Sbjct: 286 LGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 345
Query: 117 YSIFIHAFCEANDI------------------HSVFRVL-----------------DSMK 141
Y I +H + + H F +L M+
Sbjct: 346 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 405
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ L P+V +Y+ +I LCK +VE+A ++M+ G +P+ S+ +++ C E
Sbjct: 406 QNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 465
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L M + PD N ++ L + GR A + ++ + G P+V +Y+ ++
Sbjct: 466 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G C GK++E+ K F+ MV G+ P S T L N
Sbjct: 526 DGYC-FVGKMDESIKQFDRMVSIGLRPDSWTYNALLN 561
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 3/331 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + L+ CK A FD+ + P Y IL+ G G L +
Sbjct: 303 GLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 362
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L D M+ P + A N L+ A K G +D+A EMR G PD SYS IH
Sbjct: 363 RDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHI 422
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M L PN+ ++ +I LC + ++ +L EMI RG +PD
Sbjct: 423 LCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 482
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
N I+ C V A + V P+ +YN ++ VG+ D + + ++
Sbjct: 483 AIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFD 542
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P TY+ +++G K G++E+A + M + + + T ++ + L
Sbjct: 543 RMVSIGLRPDSWTYNALLNGYF-KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQA 601
Query: 304 GFLDIIEILADKM-ERSTSCTIQELANAMRG 333
G + L KM +R T I+ + G
Sbjct: 602 GRIVAARELYMKMVDRGTQLRIETYNTVLGG 632
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI + L+ A K V K F + ++ P V +YS ++ L +G
Sbjct: 369 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGR 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ +I++ SL+ +C G + + EM + G PDA +
Sbjct: 429 VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT 488
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + D + + PNV +YN +I C K++E+ + D M+ G
Sbjct: 489 IMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIG 548
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD W+YNA+L + V AL L M +++V T N++L L + GR A
Sbjct: 549 LRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAR 608
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG + TY+ ++ GLC+ ++EA + FE + + T ++ N
Sbjct: 609 ELYMKMVDRGTQLRIETYNTVLGGLCENSC-VDEALRMFEDLRSKEFELDVWTFNIVINA 667
Query: 300 LVGLGFLD 307
L+ +G +D
Sbjct: 668 LLKVGRID 675
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 36/304 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P ++ ++ LCK V A FFD H P V +Y+ L+ G VG+
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGK 533
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E+ K FD M+ D +N+LL K G +++A + REM + A + +I
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 593
Query: 120 FIHAF-----------------------------------CEANDIHSVFRVLDSMKRYN 144
+H CE + + R+ + ++
Sbjct: 594 ILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 653
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+V+T+N +I L K +++EA L M+ RG P +Y+ ++ + + +
Sbjct: 654 FELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESD 713
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M K D H N++++ L+ G RA ++++ F ST ++++ +
Sbjct: 714 DLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIV 773
Query: 265 CKKK 268
+KK
Sbjct: 774 SEKK 777
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 16/279 (5%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE-------AHGMLREMRS 107
G +G +A LFDE+L + P + A NS+L + +A + A + M
Sbjct: 26 GSLGR-EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMAR 84
Query: 108 IGAE---PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G + + I I FC + F + T N +I+ LC ++
Sbjct: 85 SGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKR 144
Query: 165 VEEAYQLL-DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE---NVMPDRH 220
++A ++ M E G PD +SYNA++ C + AL L+ MT + N P+
Sbjct: 145 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVV 204
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+Y+ ++ + G D+A +++ M +GF P V TYS ++ GLCK + + +A +
Sbjct: 205 SYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQA-MNKAEAILQH 263
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
M D+G+ P + T ++ LG L+ L KM S
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS 302
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 37/320 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD------------------------NA 36
M++ G P +Y + ++ LCK VK A +F D N
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 37 KHEFT------------PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
E T P V T++ L++GL A +LF+EM + C D +N
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++++C G +DEA ML++M G +Y+ I FC+AN I + D M+ +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ N TYN +I LCK+ +VE+A QL+D+MI G PD+++YN++L + C ++ A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAA 560
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ MT PD TY ++ L + GR + A+++ S++ +G + Y+ ++ GL
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL 620
Query: 265 CKKKGKLEEACKYFEMMVDE 284
+K+ K EA F M+++
Sbjct: 621 FRKR-KTTEAINLFREMLEQ 639
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 154/283 (54%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +GIKP + + L+ ALC+ ++ A D + P KT++ +++G + G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGD 239
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
L A ++ ++M+E C ++ N ++ CK G +++A ++EM + G PD ++++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++ C+A + ++D M + P+V+TYN +I LCK +V+EA + LD+MI R
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITR 359
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P+ +YN +++ C +V A L +T + ++PD T+N +++ L A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E++E M +G P TY++++ LC KGKL+EA + M
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLC-SKGKLDEALNMLKQM 461
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
MVEFG S ++ ++H CK V+ A F ++ F P T++ LV GL G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A ++ D ML+ D+ +NS++ +CK G + EA L +M + P+ +Y+
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYN 369
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ N + + + ++P+V T+N +I+ LC A +L +EM +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE++YN ++ C + +++ AL ++ +M TYN ++ + + A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREA 489
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+++ ME G + TY+ ++ GLCK + ++E+A + + M+ EG P
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDASQLMDQMIMEGQKP 538
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 37/318 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P Y + L++ LCK HVK A + D E + P V TY+ ++ GL +GE+ EA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ D+M+ R C + + +N+L+ +CK ++EA + R + S G PD +++ I
Sbjct: 350 VEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL------------------------ 159
C + + + M+ P+ FTYN +I L
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 160 -----------CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
CK K+ EA ++ DEM G + + +YN ++ C V A +L+
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E PD+ TYN +L R G +A ++ ++M G P + TY ++ GLC K
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-KA 588
Query: 269 GKLEEACKYFEMMVDEGI 286
G++E A K + +GI
Sbjct: 589 GRVEVASKLLRSIQMKGI 606
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 40/325 (12%)
Query: 15 QLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+LL +L + A + F+ A K F+P Y ++ LG G + RK+ ++M
Sbjct: 52 KLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN 111
Query: 73 RKC-----PVDILA-------------------------------HNSLLEAMCKAGNID 96
C P IL +N +L + N+
Sbjct: 112 SGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLK 171
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+M G +PD ++++ I A C A+ + +L+ M Y LVP+ T+ I+
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIM 231
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-V 215
+ + ++ A ++ ++M+E G + S N I+ C V AL I M+ ++
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD++T+N ++ L + G A E+ + M + G+ P V TY+ ++ GLC K G+++EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-KLGEVKEAV 350
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRL 300
++ + M+ P + T L + L
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTL 375
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 127/263 (48%), Gaps = 3/263 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
G +P + + L+ +LC + + A + +V TY+ L+ G ++ EA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREA 489
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FDEM + + +N+L++ +CK+ +++A ++ +M G +PD F+Y+ +
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTH 549
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC DI ++ +M P++ TY +I LCK +VE A +LL + +G
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALT 609
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLKLLVRVGRFDR-ATEV 241
+YN ++ + + A+ L M ++N PD +Y +V + L G R A +
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 242 WESMEKRGFYPSVSTYSVMVHGL 264
+ ++GF P S+ ++ GL
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGL 692
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E P ++ LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R+ D++ ++S++ A+CK +D+A +L M G P+ +
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + P+V TYN ++ LCKN + EA ++ D M
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +Y +L + + + L+ M + + PD H +N+++ + + D
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A V+ M + G P+V TY ++ LC K G +++A YFE M+DEG+ P Y+S
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILC-KSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447
Query: 293 VEML 296
+ L
Sbjct: 448 IHSL 451
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 147/324 (45%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P+ + +LH C + K A F + + P V TY+ L+ L G
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R DI + +LL+ G + E H +L M G PD ++I
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + V M+++ L PNV TY +I LCK+ V++A ++MI+ G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 180 ANP---------------DEWS--------------------YNAILAYHCDRAEVNMAL 204
P D+W +N+I+ HC V +
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+L M + V P+ TY+ ++ G+ D AT++ SM G P TY+ +++G
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C+ ++++A F+ MV G+ P
Sbjct: 557 CRVS-RMDDALALFKEMVSSGVSP 579
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 36/359 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV GI P + + L+ A K++ V A F + H P V TY ++ L G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ +I+ + SL+ ++C D+A ++ EM G + ++
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+ C+ + ++ D M R + PNV TY+ +I C K++EA +LL M G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + ++ AL L M V P+ TYN++L+ L R A
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E++ + K G +STY++++HGLCK
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
K G+ +EA F G+ P T ++ ++G G L+ ++ L ME CT+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSME-DNGCTV 719
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILV---------- 51
G SIY L++ L + + ++ A+ + TPTV TY IL+
Sbjct: 45 GRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLD 104
Query: 52 ---RGLGDV-----------------GELSEARK------LFDEMLERKCPVDILAHNSL 85
LG+V G ++ R + M E C D+ + L
Sbjct: 105 LGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 164
Query: 86 LEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
L+ +C EA +L M R G+ PD SY+ I+ F + D + M
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ P+V TY+ II LCK + +++A ++L M++ G P+ +YN+IL +C +
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 345 GY-ATKGALVEMHALLDLMVRNGIHP 369
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P + ++ ALCK + + A + K+ P TY+ ++ G +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA + M G EPD +Y
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + P+ +N +I K EKV+EA + +M + G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +Y A++ C V+ A+ +M E + P+ Y ++ L ++D+A
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG + ++ ++H C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHC-KEGRVIESEKLFDLMVRIGVKPNVITYSTLID 519
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P+I L+H+LC K K + ++ ++ G
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E+ KLFD M+ +++ +++L++ C AG +DEA +L M S+G +PD +Y+
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + + + M + PN+ TYN I++ L + A +L + + G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN IL C + ALR+ + ++ + T+N+++ L++VGR D A
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + G P+ TY +M + +G LEE + F M D G S + +
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENII-GQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRE 730
Query: 300 LVGLG 304
L+ G
Sbjct: 731 LLQRG 735
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 50 LVRGLGDVGELSEARKL--FDEMLER---KCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
L R L DV S A + ++ M K + + L+ C+AG +D L
Sbjct: 53 LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGN 112
Query: 105 MRSIGAEPDAFSYSIFIHAFC------EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ G +A +++ + C +A DI VL M + +P+VF+ +++
Sbjct: 113 VVKKGFRVEAITFTPLLKGLCADKRTSDAMDI-----VLRRMTELSCMPDVFSCTILLKG 167
Query: 159 LCKNEKVEEAYQLLDEMIE---RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
LC + +EA +LL M + G+ PD SY ++ + + A M +
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD TY+ ++ L + D+A EV +M K G P+ TY+ ++HG C + + +EA
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSE-QPKEAI 286
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M +G+ P T L + L
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYL 311
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 110/300 (36%), Gaps = 71/300 (23%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI + + ++H+ CK V + + FD + P V TYS L+ G G+
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS- 118
+ EA KL M D + +N+L+ C+ +D+A + +EM S G P+ +Y+
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 119 ----------------------------------IFIHAFCEANDIHSVFRVLDSM---- 140
I +H C+ N R+ ++
Sbjct: 587 ILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646
Query: 141 -----KRYN--------------------------LVPNVFTYNCIIRKLCKNEKVEEAY 169
+ +N LVPN +TY + + +EE
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
QL M + G D N I+ R E+ A ++ + +++ + T ++ + LL
Sbjct: 707 QLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYN---AILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N A +A H A V+ R+ R V P HTY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRM-ARAGAGKVTPTVHTY 90
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADK 136
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 142/267 (53%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L+ L+ LC + VK + F D + F +Y IL+ GL +GE
Sbjct: 71 ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGE 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL + +R D++ ++++++ +CK +DEA+ + EM + G PD +Y+
Sbjct: 131 TRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTT 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + F +L+ M N+ PN++TYN +I LCK KV+E+ LL M ++G
Sbjct: 191 LICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y+ ++ +C EV A ++ M + V PD ++YN+++ L + R D A
Sbjct: 251 VKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAM 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M + P TYS ++ GLCK
Sbjct: 311 NLLREMLHKNMIPDTVTYSSLIDGLCK 337
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 159/313 (50%), Gaps = 4/313 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+P + ++ LCK K V A+ + NA+ F P V TY+ L+ G G+L EA
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF-PDVITYTTLICGFCLAGQLMEAF 205
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EM+ + +I +N+L++ +CK G + E+ +L M G +PD YSI + +
Sbjct: 206 GLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGY 265
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ ++ M + + P+V++YN II LCK ++V+EA LL EM+ + PD
Sbjct: 266 CLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y++++ C + L L M + TYN +L L + D+A ++
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M++RG P+ TY+ ++ GLC K G+L++ F+ ++ +G T ++ + L G
Sbjct: 386 MKERGIQPNKYTYTALIDGLC-KGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEG 444
Query: 305 FLDIIEILADKME 317
D + KME
Sbjct: 445 MFDEALAMKSKME 457
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 143/290 (49%), Gaps = 2/290 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P+IY + L+ LCK VK + K P V YSIL+ G VGE
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+++F M++ D+ ++N ++ +CK +DEA +LREM PD +YS
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ I ++ + M N+ TYN ++ LCKN+ +++A L +M ERG
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++++Y A++ C + L + + D TY +++ L + G FD A
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ ME G P+ T+ +++ L +K ++A K M+ +G+ P+
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDEN-DKAEKLLHEMIAKGLLPF 499
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + L L++ C + + K + P + L++GL GE+ ++
Sbjct: 40 GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + +D +++ LL +CK G A +LR + PD YS I
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + P+V TY +I C ++ EA+ LL+EMI + NP+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ C +V + L+ MTK+ V PD Y++++ VG +A +++
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + G P V +Y+++++GLCK K +++EA M+ + + P + T L + L L
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGK-RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338
Query: 304 GFLDIIEILADKM 316
G + I L +M
Sbjct: 339 GRITTILDLTKEM 351
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P +Y + +++ LCK K V A H+ P TYS L+ GL +G
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L EM R P +++ +NSLL+ +CK N+D+A + +M+ G +P+ ++Y+
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + + +V+TY +I LCK +EA + +M + G
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
P+ ++ I+ ++ E + A +L+ M + ++P R+
Sbjct: 461 CIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRN 501
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
+L R P I+ +L ++ K + + ++M + G PD + SI I+ FC
Sbjct: 2 LLLRHIP-PIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ F VL + + PN N +++ LC +V+++ D+++ +G D+ SY
Sbjct: 61 MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+L C E A++L+ + + PD Y+ ++ L + D A +++ M RG
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+P V TY+ ++ G C G+L EA M+ + I P T L + L
Sbjct: 181 IFPDVITYTTLICGFC-LAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTL 230
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P + + I+ L K + L +M +G PD + + ++ C ++ +
Sbjct: 7 IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ ++ K P+ N ++K L G ++ + + +GF +Y ++++GLC
Sbjct: 67 VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 266 KKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLV 301
K G+ A K + D P YS+ ++ L +++LV
Sbjct: 127 -KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLV 166
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 10/297 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVG 58
M E G++ S+ L+ L+ ALCK + A + F + K P TY L+ GL +G
Sbjct: 146 MREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLG 205
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA++LF EM + C ++ ++ L+ +C+AGN+DEA G+ +M+ EP+ F+YS
Sbjct: 206 KTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYS 265
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ +L+ M R PN+ TY+ +I LCK K+ EA + LD M +
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY-------NMVLKLLVR 231
G PD Y I+ C+ + A + M + P+R T+ NMV++ L
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G +R+ +++ M RG T+ +V C KKG L +A + F+ MV +G P
Sbjct: 386 NGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFC-KKGDLHKAARIFDEMVLDGCVP 441
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 13/318 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGELS 61
I PS ++QLL A + ++ A FD+A E++ + T+ +++ L E
Sbjct: 13 ITPS--KVEQLLRA---ERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFR 67
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A ++ + M E KC + S+ + +A + +M G +P SY
Sbjct: 68 PAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVF 127
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE-KVEEAYQLLDEMIERGA 180
E N + M+ + +V + N +I+ LCKN ++ A+++ EM +RG
Sbjct: 128 AILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGC 187
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD ++Y ++ C + A L M + P TY+ ++ L + G D A
Sbjct: 188 DPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMG 247
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++ M+K+ P+V TYS ++ GLCK G L EA + EMMV + P T L N L
Sbjct: 248 LFDKMKKKAIEPNVFTYSSLMDGLCKNGGSL-EAMELLEMMVRKRHKPNMVTYSTLINGL 306
Query: 301 VGLGFL-DIIEILADKME 317
G L + +E L D+M+
Sbjct: 307 CKEGKLAEAVETL-DRMK 323
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G PS+ L+H LC+ +V A FD K + P V TYS L+ GL G EA
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + M+ ++ +++ +++L+ +CK G + EA L M+ G +PDA Y I+
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTY-------NCIIRKLCKNEKVEEAYQLLDEMI 176
FC LD M + PN T+ N +++ LC N + ++QL M
Sbjct: 341 FCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMR 400
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG + D ++++++ C + +++ A R+ M + +PD ++ V VG F
Sbjct: 401 TRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAV------VGGFW 454
Query: 237 RATEVWESME 246
+V E+ E
Sbjct: 455 DRRKVREAFE 464
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP++ L++ LCK + A + D K + P Y ++ G ++ + EA
Sbjct: 293 KPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAAT 352
Query: 66 LFDEM-LERKCP------VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
DEM L + P + + +N +++ +C GN++ + + MR+ G DA ++
Sbjct: 353 YLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFD 412
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY-----QLLD 173
+ FC+ D+H R+ D M VP+ ++ ++ KV EA+ +L++
Sbjct: 413 SLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMN 472
Query: 174 EMIE 177
E +E
Sbjct: 473 EFVE 476
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 3/304 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+ IY + L+ C + A F K P V T++ L+ GL +SEA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF +M E C +++ +L+ +C+ G I EA +L M G +P +Y +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 125 CEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D S +L M+ + ++PNV Y+ II LCK+ + +A L EM E+G PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + A +L+ M + + PD TYN ++ V+ G+F A E+++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG P+ TYS M+ G CK+ +L+ A F +M +G P T L + G
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQN-RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 304 GFLD 307
+D
Sbjct: 409 KRID 412
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M+E G++P+ ++ +CK+ A + P V YS ++ L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A+ LF EM E+ D+ +NS++ C +G +A +L+EM PD +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TY+ +I CK +++ A + M +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++N ++ +C ++ + L+ MT+ ++ D TYN ++ VG + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T ++ GLC GKL++A + F++M
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALEMFKVM 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-----VKTYSILVRGLG 55
M G P++ + L+ C K + + HE T T TY+ L+ G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL----HEMTETGLVADTTTYNTLIHGFY 441
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI------- 108
VG+L+ A L EM+ DI+ ++LL+ +C G + +A M + M+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 109 ----GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G EPD +Y+I I + + M +VP+ TY+ +I LCK +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA Q+ D M + +P+ ++ ++ +C V+ L L M + ++ + TY
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 2/253 (0%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ +M ++ DI + N L++ C + A ++ +G PD +++ +H
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + + M PNV T+ ++ LC+ ++ EA LLD M+E G P +
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y I+ C + + AL L+ +M + +++P+ Y+ ++ L + GR A ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+++G +P + TY+ M+ G C G+ +A + + M++ I P T L N V
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 304 GFLDIIEILADKM 316
G E L D+M
Sbjct: 339 GKFFEAEELYDEM 351
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
M+ G+ P I D LL LC +K A + F +A H F P V+TY+
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ EA +L++EM R D + ++S+++ +CK +DEA M M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ +++ I+ +C+A + + M R +V N TY +I K + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+ EMI G PD + +L + E+ A+ ++ ++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ GI P + L+ LC+ +K A +FF + + V TY+ L+ GL G
Sbjct: 1111 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 1170
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E + M++R D L++ +CK G + EA +L MR G EPD +Y+
Sbjct: 1171 WKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNT 1230
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C + ++ +S+ + NVF+YN +I CK++K++EA++ +EM +G
Sbjct: 1231 LMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG 1290
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C V A +L M TY ++L L + G + A
Sbjct: 1291 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAM 1350
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S++K P++ +S+++ G+C + GKLEEA K F+ + G+ P + +L N
Sbjct: 1351 DLFQSIKKTEHKPNIEVFSILLDGMC-RAGKLEEAWKQFDEISKNGLEPDTIAYNILING 1409
Query: 300 LVGLGFL 306
L G L
Sbjct: 1410 LCNKGML 1416
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +Y + L+H L + K F + F+P T++IL+ GL G++ EA
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ + M + DIL +N+L+ +C G +++A + + G + + FSY+I I+
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ I FR + M+ L P+ TYN +I LC++ +V A +L EM G
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L C + A+ L + K P+ ++++L + R G+ + A + ++
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ K G P Y+++++GLC KG L EA K M ++G P S T ++ L+
Sbjct: 1390 EISKNGLEPDTIAYNILINGLC-NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 1446
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 2/274 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
K ++ ++ ALCK A F P V YS L+ GL G L EA +
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM R D+ +NSL+ + +AG E L M G PDAF+++I I C
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 1201
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + ++L+ M+ P++ TYN ++ LC ++E+A +L + + +RG + +
Sbjct: 1202 KEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 1261
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SYN ++ +C +++ A R M + + P TYN ++ L + GR A +++ M
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ G + +STY V++ GLC K G LEEA F+
Sbjct: 1322 QTCGQFLKLSTYCVLLDGLC-KNGHLEEAMDLFQ 1354
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 155/335 (46%), Gaps = 40/335 (11%)
Query: 3 EFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
+ GI+P +Y L+ L+H C R F K F P T + LV+G+ +
Sbjct: 974 DVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIP 1033
Query: 62 EARKLFDEMLER----------------------------------KCPVDILAHNSLLE 87
+A +LFDEM ++ C D+ + +++
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIID 1093
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
A+CK G EA M EM G PD YS + C + M+ +
Sbjct: 1094 ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 1153
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+V+TYN +I L + +E L+ M++RG +PD +++ ++ C +V A +++
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + PD TYN ++ L VG+ + AT+++ES+ RG +V +Y+++++G CK
Sbjct: 1214 ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 1273
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ K++EA ++FE M +G+ P + T N L+G
Sbjct: 1274 Q-KIDEAFRFFEEMRPKGLKPSTVTY----NTLIG 1303
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ G P + L+ LCK V A Q + +H+ P + TY+ L+ GL VG+
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A KLF+ + +R +++ ++N L+ CK IDEA EMR G +P +Y+
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C++ + + ++ M+ + TY ++ LCKN +EEA L + +
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++ +L C ++ A + ++K + PD YN+++ L G A
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ME++G P T++V++ L K+ ++ EA + E M + P + ML
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKEN-EIHEAIQLLEEMRNRNFSPDEAVTSML 1476
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L++ LCK + +A + + K V TY +++ L G +EA +F EM+
Sbjct: 1057 LINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGI 1116
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D++ ++SL++ +C+ G + EA +EM G D ++Y+ IH A V
Sbjct: 1117 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 1176
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
L+ M P+ FT+ +I LCK KV EA Q+L+ M +G PD +YN ++ C
Sbjct: 1177 FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLC 1236
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
++ A +L + + + +YN+++ + + D A +E M +G PS
Sbjct: 1237 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTV 1296
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMM 281
TY+ ++ LC + G++ A K F M
Sbjct: 1297 TYNTLIGALC-QSGRVRTAQKLFVEM 1321
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ + GIK +++ + L++ CK + + A +FF+ + + P+ TY+ L+ L G
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+KLF EM + + + LL+ +CK G+++EA + + ++ +P+ +SI
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + ++ D + + L P+ YN +I LC + EA +LL +M E+G
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
PD ++N I+ E++ A++L+ M N PD +M+L L
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 1479
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 141/341 (41%), Gaps = 46/341 (13%)
Query: 35 NAKHEFTPTVKTYSILVRGLGD-----VGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
N+K E T + S R + D + +L++A KLFD L + N LL ++
Sbjct: 897 NSKSEKIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASV 956
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE----------------------- 126
K G M R++ +G +PD ++ +I IH C
Sbjct: 957 AKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDA 1016
Query: 127 ------------ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
N I ++ D M + L+ + TY +I LCK K A +L ++
Sbjct: 1017 VTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEK 1076
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M + D ++Y I+ C AL + + M ++PD Y+ ++ L R GR
Sbjct: 1077 M-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 1135
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A E ++ ME RG V TY+ ++HGL + G +E + +MVD G P + T
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGL-SRAGLWKEVTWFLNLMVDRGFSPDAFTFT 1194
Query: 295 MLRNRLVGLGFL----DIIEILADKMERSTSCTIQELANAM 331
+L + L G + I+E++ K + T L N +
Sbjct: 1195 ILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGL 1235
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+ P +Y + ++ +CK V+ A + + + P V +Y+IL+R + G+
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KL EM R C + + ++ L+ ++C+ G IDEA +L+ M PD +SY
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + ++D M +P++ YN I+ LCKN +A ++ +++ G
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN +++ + + AL ++ M + + PD TYN ++ L R G + A
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + ME+ GF P+V +Y++++ GLCK + ++++A F M+++G P +T +L
Sbjct: 483 GLLDDMEQSGFRPTVISYNIVLLGLCKVR-RIDDAIGMFAEMIEKGCRPNETTYILL--- 538
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 539 IEGIGF 544
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 160/314 (50%), Gaps = 9/314 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P I + ++ +LC R+ + +A D + PTV TY+IL+ G ++EA
Sbjct: 177 GFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 236
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +EML R D+ +N+++ MCK G ++ A ++ + S G EPD SY+I + A
Sbjct: 237 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRA 296
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F +++ M PN TY+ +I LC+ +++EA +L MIE+ PD
Sbjct: 297 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 356
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+SY+ +++ C +++A+ ++ M +PD YN +L L + G ++A E++
Sbjct: 357 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 416
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RN 298
+ G P+VS+Y+ M+ L G A M+ +GI P Y+S + L R+
Sbjct: 417 KLRGMGCPPNVSSYNTMISAL-WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRD 475
Query: 299 RLV--GLGFLDIIE 310
LV +G LD +E
Sbjct: 476 GLVEEAIGLLDDME 489
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 159/305 (52%), Gaps = 3/305 (0%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L +LL+ CK + F + ++ +TP V + L++G + + +A ++ E+L
Sbjct: 81 LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EIL 139
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
E D+ A+N+++ CK I+ A +L M++ G PD +Y+I I + C +
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
VLD + N +P V TY +I + EA +LL+EM+ RG PD ++YNAI+
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C V A LIT +T + PD +YN++L+ + G++D ++ M RG
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+ TYS+++ LC + G+++EA ++M+++ + P + + + L + L G LD+
Sbjct: 320 PNKVTYSILISSLC-RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378
Query: 312 LADKM 316
+ D M
Sbjct: 379 IMDYM 383
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
+V G P + +L+ K+++ A + + + P V Y+ ++ G V ++
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQI 163
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ + M R DI+ +N ++ ++C + A +L ++ P +Y+I
Sbjct: 164 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTIL 223
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A I+ ++L+ M L+P+++TYN IIR +CK VE A +L+ + +G
Sbjct: 224 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGC 283
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD SYN +L ++ + + +L+ M P++ TY++++ L R GR D A
Sbjct: 284 EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V + M ++ P +Y ++ LC K+G+L+ A + M+ G P
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALC-KEGRLDLAIGIMDYMISNGCLP 390
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G +P+ L+ +LC+ + A + E TP +Y L+ L G
Sbjct: 313 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + D M+ C DI+ +N++L A+CK GN ++A + ++R +G P+ SY+
Sbjct: 373 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 432
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A D ++ +M + P+ TYN +I LC++ VEEA LLD+M + G
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN +L C ++ A+ + M ++ P+ TY ++++ + G A
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 552
Query: 240 EVWESMEKR 248
E+ S+ R
Sbjct: 553 ELANSLFSR 561
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 151/289 (52%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGE 59
E G P ++ LL +LC + A +P V Y+ ++ G+
Sbjct: 179 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ ++S++ A+CKA + +A LR+M + G PD ++Y+
Sbjct: 239 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R++++P+V T N ++ LCK K++EA + D M +G
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SY +L + + + L M + + PD +T+++++K G D+A
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAM 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY+ ++ LC + GK+++A + F M+D+G+ P
Sbjct: 419 IIFNEMRDHGVKPDVVTYTTVIAALC-RIGKMDDAMEKFNQMIDQGVAP 466
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 39/344 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI P + ++HALCK + + A F ++ P TY+ L+ G G+
Sbjct: 249 MVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM D++ N L+ ++CK G I EA + M G PD FSY I
Sbjct: 309 WKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKI 368
Query: 120 FIHAFCE-------------------ANDIHSVFRVL-----------------DSMKRY 143
++ + A DI++ F VL + M+ +
Sbjct: 369 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT-FSVLIKAYANCGMLDKAMIIFNEMRDH 427
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V TY +I LC+ K+++A + ++MI++G PD+++Y+ ++ C + A
Sbjct: 428 GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 487
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
LI + + D ++ ++ L ++GR A +++ G +P YS+++ G
Sbjct: 488 KELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDG 547
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 548 YC-LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRID 590
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 39/315 (12%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+PT TY+IL+ A F ++L VDI+ N LL+ C+A DEA
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 100 G-MLREMRSIGAEPDAFSYSIFIHAFCEA------------------------------- 127
+L +G PD FSYSI + + C+
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 128 ------NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
D++ + M + + P++ TY+ ++ LCK + +A L +M+ +G
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD W+YN ++ + + A+R+ M + +++PD T NM++ L + G+ A +V
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+++M +G P V +Y +M++G KG L + F++M+ +GI P T +L
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGY-ATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409
Query: 302 GLGFLDIIEILADKM 316
G LD I+ ++M
Sbjct: 410 NCGMLDKAMIIFNEM 424
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 2/294 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+KP + ++ ALC+ + A + F+ + P Y L++G G
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A++L E++ +DI+ +S++ +CK G I +A + ++G PDA YS+
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C + RV D+M + PNV Y ++ CK +++E L EM+++G
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 603
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P YN I+ A MT+ + ++ TYN+VL+ + FD A
Sbjct: 604 IKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAI 663
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+++ + + T + M+ G+ + + ++EEA F + G+ P TV
Sbjct: 664 FLFKELRAMNVKIDIITLNTMIAGMFQTR-RVEEAKDLFASISRSGLVPCVVTV 716
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-------------------------- 39
I P + L+ L+ +LCK +K A FD +
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT 383
Query: 40 ----------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
P + T+S+L++ + G L +A +F+EM + D++ + +++ A+
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
C+ G +D+A +M G PD ++Y I FC + ++ + + ++
Sbjct: 444 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
++ II LCK ++ +A + D + G +PD Y+ ++ +C ++ ALR+
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + P+ Y ++ ++GR D ++ M ++G PS Y++++ GL
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Query: 270 KLEEACKYFEM 280
+ K+ EM
Sbjct: 624 TVPAKVKFHEM 634
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P IY L+ A + A F+ + H P V TY+ ++ L +G+
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M+++ D A++ L++ C G++ +A ++ E+ + G D +S
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ I + D P+ Y+ ++ C K+E+A ++ D M+ G
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ +C ++ L L M ++ + P YN+++ L GR A
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ M + G + TY++++ G K +
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNR 657
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI + L++ C +K A + P V+TY+ILV LG G++ EA
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA 536
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ML+ D+ +N+L+ + +A + M +G PD +Y+I I+
Sbjct: 537 KSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 596
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M + N+VP+ TY+ ++ LCK+ ++ + L+DEM +RG D
Sbjct: 597 FCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPAD 656
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C ++ A+ L +M + + P+ T+ ++L L + GR A EV++
Sbjct: 657 VITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 716
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ +G++ V Y+VM++G C K+G LEEA M + G P + T +++ N L
Sbjct: 717 DLLTKGYHLDVYIYNVMIYGHC-KQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 149/314 (47%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS L+ L+ LC + VK A F D F +Y+ L+ G+ +G+ A
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ R ++ ++++++A+CK + EA+G+ EM G D +YS I+
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 491
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +L+ M + P+V TY ++ L K KV+EA +L M++ PD
Sbjct: 492 FCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ + EV A + M+ V PD HTY +++ + D A +++
Sbjct: 552 VFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFK 611
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++ P TYS +V GLC K G++ + M D G P T L + L
Sbjct: 612 EMHQKNMVPDTVTYSSLVDGLC-KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670
Query: 304 GFLDIIEILADKME 317
G LD L +KM+
Sbjct: 671 GHLDKAIALFNKMK 684
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 153/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ L+ L++ C + K + P+ T + L++GL G++ +A
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L + ++ +++ +L+ +CK G+ A +LR++ +P+ YS I A
Sbjct: 397 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDA 456
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + +V TY+ +I C K++EA LL+EM+ + NPD
Sbjct: 457 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPD 516
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ +V A ++ M K V PD TYN ++ + V +A V+
Sbjct: 517 VRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFN 576
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M G P V TY+++++G CK K ++EA F+ M + + P + T L + L
Sbjct: 577 AMSLMGVTPDVHTYTILINGFCKSK-MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635
Query: 304 GFLDIIEILADKM 316
G + + L D+M
Sbjct: 636 GRISYVWDLIDEM 648
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KP ++ + L++ VK A F+ + TP V TY+IL+ G
Sbjct: 543 MLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKM 602
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF EM ++ D + ++SL++ +CK+G I ++ EMR G D +Y+
Sbjct: 603 VDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS 662
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + + MK + PN FT+ ++ LCK ++++A ++ +++ +G
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D + YN ++ HC + + AL ++++M + +P+ T+++++ L + D+A
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782
Query: 240 EVWESMEKRGF 250
++ M RG
Sbjct: 783 KLLRQMIARGL 793
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 4/331 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ LC + VK A F D F +Y+ L+ G+ +G+ A
Sbjct: 58 GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K ++ R ++ +N++++A+CK + EA+G+ EM G + +YS I+
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +L+ M + PNV TYN ++ LCK KV+EA +L M++ +
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ + EV A + M+ V PD H+YN+++ ++ R D+A +++
Sbjct: 238 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFK 297
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M F P + ++ ++ K K A + +GI P T+ +L N +
Sbjct: 298 EMILSRF-PPIIQFNKILDSFAKMK-HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM 355
Query: 304 GFLDI-IEILADKMERSTSCTIQELANAMRG 333
G + +LA ++R + L ++G
Sbjct: 356 GQITFGFSVLAKILKRGYPPSTVTLNTLIKG 386
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 27 KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLL 86
K H F + TP V +Y+I++ G + + +A LF EM+ + P I+ N +L
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFP-PIIQFNKIL 314
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
++ K + A + + G +PD F+ +I I+ FC I F VL + +
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ T N +I+ LC +V++A D+++ +G ++ SY ++ C + A++L
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ ++ P+ Y+ ++ L + A ++ M +G V TYS +++G C
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC- 493
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
GKL+EA MV + I P T +L + L
Sbjct: 494 IVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K + P T + L++GL G++ EA D++L + ++ +++ +L+ +C+ G+
Sbjct: 56 KRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTR 115
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A LR++ A+P+ Y+ I A C+ + + + M + NV TY+ +I
Sbjct: 116 AAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLI 175
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
C K++EA LL+ M+ + NP+ +YN ++ C +V A ++ M K V
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ TY+ ++ V +A V+ +M G P V +Y++M++G CK K ++++A
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIK-RVDKALN 294
Query: 277 YFEMMVDEGIPP 288
F+ M+ PP
Sbjct: 295 LFKEMILSRFPP 306
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+ P ++ L++ CK K V A F + P TYS LV GL G
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S L DEM +R P D++ +NSL++ +CK G++D+A + +M+ G P+ F+++I
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C+ D VF+ L + K Y+L +V+ YN +I CK +EEA +L +M
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLT-KGYHL--DVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
E G P+ +++ I+ + E + A +L+ +M ++
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 94 NIDEAHGM--LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
N+D+A + L ++ G PD + + I C + D + N +
Sbjct: 41 NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVS 100
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I +C+ A + L ++ R A P+ YN I+ C V+ A L + MT
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + + TY+ ++ VG+ A + M + P+V TY+++V LC K+GK+
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALC-KEGKV 219
Query: 272 EEACKYFEMM----VDEGIPPYSSTVE 294
+EA +M V + YS+ ++
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMD 246
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 152/282 (53%), Gaps = 10/282 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLGDVGELS 61
+P+ L+H LC+ ++ A Q K E P+ +TY++L++ D+G
Sbjct: 239 RPNSVTYSILIHGLCEAGRLEEAFQL----KQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 294
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A K+ DEM + C ++ + L++ +C+ G I+EA+G+ R+M G P +++ I
Sbjct: 295 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 354
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C+ + S F++L M++ N PN+ TYN ++ LC+ K +A+ LL +++ G
Sbjct: 355 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 414
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN ++ C ++NMA + M + PD T+ ++ L ++GR ++A +
Sbjct: 415 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 474
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
SM K+G T++ ++ G C K GK ++ C FE MV+
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHC-KIGKAKDVCFLFENMVE 515
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+++ L+ LC+ ++ A+ F KH P + T++ L+ G G + A +L
Sbjct: 310 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M + C +I +N L+E +C+ +A +LR + G PD +Y+I + FC+
Sbjct: 370 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 429
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ F + +SM L P+ FT+ +I LCK ++E+A +L M+++G + DE +
Sbjct: 430 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 489
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ HC + L M + + HT+N L L + + + A + M
Sbjct: 490 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 549
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K G PSV T+++++ G C + G+ + K E M G P T ++ N L G
Sbjct: 550 KYGLVPSVVTHTILIEGHC-RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 606
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 8/299 (2%)
Query: 7 KPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
KP+I ++L+ LC+ K + + DN P TY+ILV G G+L+
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG---LLPDRVTYNILVDGFCKEGQLNM 435
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +F+ M D +L++ +CK G +++A+G+L M G D +++ I
Sbjct: 436 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 495
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ V + ++M + T+NC + L K+ K+ EA +L +M++ G P
Sbjct: 496 GHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 555
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ HC E ++L+++ RM + P+ +TY +++ L GR + A +
Sbjct: 556 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 615
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
SM G P+ TY+V+V K G+L+ A + MV G P S L + V
Sbjct: 616 FSMSSFGVSPNHFTYAVLVKAHV-KAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 673
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F + YS L+ L + A ++ M+ + + + +++ A+CK G + A
Sbjct: 132 FRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE 191
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRK 158
++ +G D + + A C +D+ FRV + M K N PN TY+ +I
Sbjct: 192 MFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHG 251
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LC+ ++EEA+QL EM+E+G P +Y ++ CD + A++++ M + +P+
Sbjct: 252 LCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 311
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
HTY +++ L R G+ + A V+ M K G P + T++ +++G CK+
Sbjct: 312 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 360
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+++G+ PS+ L+ C+ ++ + + K +P V TY+I++ GL + G
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + M + + L++A KAG +D A ++ M G +P++ YS
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 667
Query: 120 FIHAFCEANDIHSVFRVLDS---MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ F +N R L S + +L NC+ + + V+ A ++ DE I
Sbjct: 668 LLSGFVLSNTAIGA-RALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE-I 725
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++ P E YN ++ C + A +L M K + PD+ + +++ + ++D
Sbjct: 726 KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYD 784
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
E + + F PS ++Y ++HGL + +G+++EA K +V
Sbjct: 785 NCLEFMKLVLDNKFVPSFASYCWVIHGL-RNEGRVQEAQKLVSDLV 829
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 2/202 (0%)
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G L M +G YS + + N F V M V Y ++ L
Sbjct: 122 GALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL 181
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPD 218
CKN V+ A +++ G D +++ +C R ++ A R+ +M+K EN P+
Sbjct: 182 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPN 241
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
TY++++ L GR + A ++ + M ++G PS TY+V++ C G ++A K
Sbjct: 242 SVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC-DIGMTDKAMKML 300
Query: 279 EMMVDEGIPPYSSTVEMLRNRL 300
+ M + P T +L +RL
Sbjct: 301 DEMATKACVPNVHTYTILIDRL 322
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 152/282 (53%), Gaps = 10/282 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLGDVGELS 61
+P+ L+H LC+ ++ A Q K E P+ +TY++L++ D+G
Sbjct: 196 RPNSVTYSILIHGLCEAGRLEEAFQL----KQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 251
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A K+ DEM + C ++ + L++ +C+ G I+EA+G+ R+M G P +++ I
Sbjct: 252 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 311
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C+ + S F++L M++ N PN+ TYN ++ LC+ K +A+ LL +++ G
Sbjct: 312 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 371
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN ++ C ++NMA + M + PD T+ ++ L ++GR ++A +
Sbjct: 372 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 431
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
SM K+G T++ ++ G C K GK ++ C FE MV+
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHC-KIGKAKDVCFLFENMVE 472
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+++ L+ LC+ ++ A+ F KH P + T++ L+ G G + A +L
Sbjct: 267 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M + C +I +N L+E +C+ +A +LR + G PD +Y+I + FC+
Sbjct: 327 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 386
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ F + +SM L P+ FT+ +I LCK ++E+A +L M+++G + DE +
Sbjct: 387 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 446
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ HC + L M + + HT+N L L + + + A + M
Sbjct: 447 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 506
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K G PSV T+++++ G C + G+ + K E M G P T ++ N L G
Sbjct: 507 KYGLVPSVVTHTILIEGHC-RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 563
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 8/299 (2%)
Query: 7 KPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
KP+I ++L+ LC+ K + + DN P TY+ILV G G+L+
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG---LLPDRVTYNILVDGFCKEGQLNM 392
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +F+ M D +L++ +CK G +++A+G+L M G D +++ I
Sbjct: 393 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 452
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ V + ++M + T+NC + L K+ K+ EA +L +M++ G P
Sbjct: 453 GHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 512
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ HC E ++L+++ RM + P+ +TY +++ L GR + A +
Sbjct: 513 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 572
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
SM G P+ TY+V+V K G+L+ A + MV G P S L + V
Sbjct: 573 FSMSSFGVSPNHFTYAVLVKAHV-KAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 630
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+++G+ PS+ L+ C+ ++ + + K +P V TY+I++ GL + G
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + M + + L++A KAG +D A ++ M G +P++ YS
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624
Query: 120 FIHAFCEANDIHSVFRVLDS---MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ F +N R L S + +L NC+ + + V+ A ++ DE I
Sbjct: 625 LLSGFVLSNTAIGA-RALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE-I 682
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++ P E YN ++ C + A +L M K + PD+ + +++ + ++D
Sbjct: 683 KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYD 741
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
E + + F PS ++Y ++HGL + +G+++EA K +V
Sbjct: 742 NCLEFMKLVLDNKFVPSFASYCWVIHGL-RNEGRVQEAQKLVSDLV 786
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 2/202 (0%)
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G L M +G YS + + N F V M V Y ++ L
Sbjct: 79 GALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL 138
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPD 218
CKN V+ A +++ G D +++ +C R ++ A R+ +M+K E+ P+
Sbjct: 139 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPN 198
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
TY++++ L GR + A ++ + M ++G PS TY+V++ C G ++A K
Sbjct: 199 SVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC-DIGMTDKAMKML 257
Query: 279 EMMVDEGIPPYSSTVEMLRNRL 300
+ M + P T +L +RL
Sbjct: 258 DEMATKACVPNVHTYTILIDRL 279
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+H LC+ + A +F+ + + PTV+TY++LV L + G EA LF EM ER
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C ++ + L++ +CK G +DEA ML EM G P ++ I ++C+ +
Sbjct: 320 GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA 379
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
VL M+ + PNV TYN +I C+ + ++ A LL++M+E +PD +YN ++
Sbjct: 380 VGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHG 439
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C+ V+ A RL M ++ PD+ T+N + L R+GR A ++ ES++++ +
Sbjct: 440 LCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN 499
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ G C K GK+E A F+ M+ E P S T ++ + L G + +L
Sbjct: 500 EHAYTALIDGYC-KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV 558
Query: 314 DKMER 318
+ M +
Sbjct: 559 EDMAK 563
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G+ PS+ + L+ + CKR ++ A + + P V+TY+ L+ G
Sbjct: 351 MVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKS 410
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M+E K D++ +N+L+ +C+ G +D A + R M G PD ++++
Sbjct: 411 MDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNA 470
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ C + ++L+S+K ++ N Y +I CK K+E A L M+
Sbjct: 471 FMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE 530
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ +V A+ L+ M K +V P HTYN++++ +++ FDRA
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRAN 590
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ + G+ P+V TY+ + C +G+LEEA + + +EG+ S +L N
Sbjct: 591 EILNRLISSGYQPNVVTYTAFIKAYC-SQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINA 649
Query: 300 LVGLGFLD 307
+G LD
Sbjct: 650 YGCMGLLD 657
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 136/273 (49%), Gaps = 1/273 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MVE + P + + L+H LC+ V A + F + F+P T++ + L +G
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR 480
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ + + E+ + A+ +L++ CKAG I+ A + + M + P++ ++++
Sbjct: 481 VGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNV 540
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + +++ M ++++ P + TYN ++ ++ K + A ++L+ +I G
Sbjct: 541 MIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG 600
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y A + +C + + A ++ ++ E V+ D YN+++ +G D A
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAF 660
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
V M G PS TYS+++ L +K K E
Sbjct: 661 GVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE 693
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 35/302 (11%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE---RKCPVDILAHNSLLEAMCKAGNID 96
F ++ +Y+ L+ L + E L+ EML +++ N++L + CK GN+
Sbjct: 147 FKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMA 206
Query: 97 EAHGMLREMRSIGAEPDAF-------------------------------SYSIFIHAFC 125
A + PD F SY+ IH C
Sbjct: 207 VARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLC 266
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
EA +H M+ P V TY ++ LC++ + EA L EM ERG P+ +
Sbjct: 267 EAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVY 326
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ Y C ++ AL+++ M ++ V P +N ++ + G + A V M
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
E + P+V TY+ ++ G C+ K ++ A MV+ + P T L + L +G
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGK-SMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGV 445
Query: 306 LD 307
+D
Sbjct: 446 VD 447
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 139/330 (42%), Gaps = 31/330 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M +F +KP+++ + L+ + K A++ + + P V TY+ ++ G
Sbjct: 561 MAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGR 620
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ ++ +D +N L+ A G +D A G+LR M G EP +YSI
Sbjct: 621 LEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSI 680
Query: 120 FI-HAFCEAN----------------------------DIHSVFRVLDSMKRYNLVPNVF 150
+ H E + D + + M VPN+
Sbjct: 681 LMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLN 740
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY+ +I LCK ++ A+ L M E G +P E +N++L+ C A+ L+ M
Sbjct: 741 TYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + + +Y +++ L ++A V+ S+ + G+ + V++ GL K G
Sbjct: 801 MECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGL-AKTGY 859
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++ + +M G + T ML L
Sbjct: 860 VDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF++M E C ++ ++ L+ +CK G ++ A + MR G P ++ + + C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ +LDSM + + ++ +Y +I L + E+A + ++ G N DE
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
++ ++ V+ L+ M K TY+M+++ L R
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 5/342 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A F+ FTP ++TY++L+ G V L
Sbjct: 269 MKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNL 328
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA K++++M++ DI+AHN++LE + + +A + M++ G PD SY+I
Sbjct: 329 MEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTIL 388
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ FC+ + + + M+ P+ Y C+I ++++ Y LL EM G
Sbjct: 389 VRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGC 448
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ + A+R+ +M + + P HTY+M++K + ++
Sbjct: 449 PPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVA 508
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
W+ M+ +G P ++Y+V + GL G+ EA KY E M+++G+
Sbjct: 509 AWDEMKLKGCCPDDNSYTVFIGGLI-SLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADF 567
Query: 301 VGLGFLDIIEILADKMERS----TSCTIQELANAMRGKTGFR 338
G DI+E LA KM+ S S I A MR + R
Sbjct: 568 SRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 609
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS---YSIFIHAFCEANDIHSVF 134
D +N+++ + K + +L EM AE + + +++ AF A +
Sbjct: 208 DSKTYNTMMTILGKTRQFETMVSLLEEM----AEKELLTMETFTVCFKAFAAAKERKKAV 263
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL+ MK+Y V T NC++ L + + +EA + +++ R P+ +Y +L
Sbjct: 264 GVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGW 322
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A ++ +M E+ PD +N +L+ L+R + A +++E M+ +G P V
Sbjct: 323 CRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDV 382
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+Y+++V C K+ K++EA +YFE M G P ++ L + G G
Sbjct: 383 KSYTILVRDFC-KQAKMKEAVQYFEEMQGAGCRPDAAIYTCL---ITGFG 428
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 152/282 (53%), Gaps = 10/282 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLGDVGELS 61
+P+ L+H LC+ ++ A Q K E P+ +TY++L++ D+G
Sbjct: 262 RPNSVTYSILIHGLCEAGRLEEAFQL----KQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 317
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A K+ DEM + C ++ + L++ +C+ G I+EA+G+ R+M G P +++ I
Sbjct: 318 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 377
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C+ + S F++L M++ N PN+ TYN ++ LC+ K +A+ LL +++ G
Sbjct: 378 NGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 437
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN ++ C ++NMA + M + PD T+ ++ L ++GR ++A +
Sbjct: 438 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 497
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
SM K+G T++ ++ G C K GK ++ C FE MV+
Sbjct: 498 LGSMVKKGISLDEVTFTALIDGHC-KIGKAKDVCFLFENMVE 538
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+++ L+ LC+ ++ A+ F KH P + T++ L+ G G + A +L
Sbjct: 333 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M + C +I +N L+E +C+ +A +LR + G PD +Y+I + FC+
Sbjct: 393 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 452
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ F + +SM L P+ FT+ +I LCK ++E+A +L M+++G + DE +
Sbjct: 453 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 512
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ HC + L M + + HT+N L L + + + A + M
Sbjct: 513 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 572
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K G PSV T+++++ G C + G+ + K E M G P T ++ N L G
Sbjct: 573 KYGLVPSVVTHTILIEGHC-RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 629
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 8/299 (2%)
Query: 7 KPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
KP+I ++L+ LC+ K + + DN P TY+ILV G G+L+
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG---LLPDRVTYNILVDGFCKEGQLNM 458
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +F+ M D +L++ +CK G +++A+G+L M G D +++ I
Sbjct: 459 AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALID 518
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ V + ++M + T+NC + L K+ K+ EA +L +M++ G P
Sbjct: 519 GHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 578
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ HC E ++L+++ RM + P+ +TY +++ L GR + A +
Sbjct: 579 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
SM G P+ TY+V+V K G+L+ A + MV G P S L + V
Sbjct: 639 FSMSSFGVSPNHFTYAVLVKAHV-KAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 696
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F + YS L+ L + A ++ M+ + + + +++ A+CK G + A
Sbjct: 155 FRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAE 214
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRK 158
++ +G D + + A C +D+ FRV + M K N PN TY+ +I
Sbjct: 215 MFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHG 274
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LC+ ++EEA+QL EM+E+G P +Y ++ CD + A++++ M + +P+
Sbjct: 275 LCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 334
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
HTY +++ L R G+ + A V+ M K G P + T++ +++G CK+
Sbjct: 335 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKE 383
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 27/323 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI L+ CK K F+N ++ T T++ + LG +
Sbjct: 501 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 560
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA + +M++ ++ H L+E C+AG + ML M+ G P+ ++Y+I
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + +L SM + + PN FTY +++ K +++ A+Q++ M++ G
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRL--------------------ITRMTKENVMPDR 219
P+ Y+A+L+ A L ++ K+ +P
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTE 740
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
YN ++ L + GR A ++ + M K G +P + S++ H C K K + ++ +
Sbjct: 741 DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YC-KTCKYDNCLEFMK 798
Query: 280 MMVDEGIPP----YSSTVEMLRN 298
+++D P Y + LRN
Sbjct: 799 LVLDNKFVPSFASYCWVIHGLRN 821
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 18/283 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+++G+ PS+ L+ C+ ++ + + K +P V TY+I++ GL + G
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + M + + L++A KAG +D A ++ M G +P++ YS
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F +N R L S T + R L E L I++
Sbjct: 691 LLSGFVLSNTAIGA-RALSS-----------TGDLDARSLSSEENDNNC---LSNEIKKC 735
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P E YN ++ C + A +L M K + PD+ + +++ + ++D
Sbjct: 736 GVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCL 794
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
E + + F PS ++Y ++HGL + +G+++EA K +V
Sbjct: 795 EFMKLVLDNKFVPSFASYCWVIHGL-RNEGRVQEAQKLVSDLV 836
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 2/202 (0%)
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G L M +G YS + + N F V M V Y ++ L
Sbjct: 145 GALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL 204
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPD 218
CKN V+ A +++ G D +++ +C R ++ A R+ +M+K EN P+
Sbjct: 205 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPN 264
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
TY++++ L GR + A ++ + M ++G PS TY+V++ C G ++A K
Sbjct: 265 SVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC-DIGMTDKAMKML 323
Query: 279 EMMVDEGIPPYSSTVEMLRNRL 300
+ M + P T +L +RL
Sbjct: 324 DEMATKACVPNVHTYTILIDRL 345
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 4/320 (1%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
V P L+ LL A CK V+ A F K + +TYSIL G +
Sbjct: 213 VRMRTPPETDALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPK 272
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYS 118
A K+ +EM++ K + +N+ +++ C AG + EA + MR+ G+ P A +YS
Sbjct: 273 RAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYS 332
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I A +A + F ++ M++ +P+V TY +I + +K++ AY +LDEM +
Sbjct: 333 IMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKA 392
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C + + AL L RM + + P HTYNM++ + + DRA
Sbjct: 393 GFPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRA 452
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+W M+KRG + +V TY M+ GL G+ E+A + +++ G+ + +
Sbjct: 453 INIWIEMDKRGCHRAVDTYETMIDGLF-DSGRTEDATTLLDEVINRGMKLSYKKFDAIML 511
Query: 299 RLVGLGFLDIIEILADKMER 318
RL +G L I L++ M R
Sbjct: 512 RLSAVGNLGAIHRLSEHMRR 531
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS--IGAEPDAFS 116
L+ RKL + R + P + A N LL+A CK+G + EA + ++ +G +A +
Sbjct: 201 LTHLRKLAKKRRVRMRTPPETDALNVLLDAFCKSGMVREAEAVFSRVKRKLLG---NAET 257
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YSI +C A D +VL+ M + P FTYN I C V EA L + M
Sbjct: 258 YSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMR 317
Query: 177 ERG---ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
G ++P +Y+ ++A ++ LI+ M K MPD TY +++ ++ V
Sbjct: 318 TEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVD 377
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D A V + M K GF P + TY+ + LC + K ++A + E M++ P T
Sbjct: 378 KLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQ-KADDALELCERMIEAHCEPSVHTY 436
Query: 294 EML 296
ML
Sbjct: 437 NML 439
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 153/287 (53%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G + + LL AL + + A+Q FD + + P +++Y+ L+ + L
Sbjct: 281 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNL 340
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 341 VEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTML 400
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + R + M+ P+V TY C++ ++++ LL+EM ++G
Sbjct: 401 IRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGC 460
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-FDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K GR +
Sbjct: 461 PPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGC 520
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VWE M ++G P V++Y+V ++G + G+ EEACKY E M+ +G+
Sbjct: 521 AVWEEMHRKGICPDVNSYTVFINGHI-RHGRPEEACKYIEEMIQKGM 566
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 2/282 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
+++H L K + + E + + I ++ GE+ A +F+ M
Sbjct: 226 KMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHG 285
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+ + N LL A+ + G EA+ + MR A PD SY+ + A+C A ++
Sbjct: 286 FDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA-PDLRSYTALMLAWCNARNLVEAG 344
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
RV + M L P+V +N +I L + ++ EA ++ + M +G P+ W+Y ++ H
Sbjct: 345 RVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDH 404
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C R +++MA+R M PD TY +L R DR T + E M ++G P
Sbjct: 405 CKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDG 464
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
TY+ ++ L + ++A + ++ M+ +G+ P T M+
Sbjct: 465 RTYNALIK-LLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 505
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G P+++ L+ CKR + +A + F+ + P V TY+ L+ G G+ +
Sbjct: 389 GPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRV 448
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +EM ++ CP D +N+L++ + D+A + ++M G EP +Y++ + +
Sbjct: 449 TALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 508
Query: 124 -FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
F + V + M R + P+V +Y I ++ + EEA + ++EMI++G
Sbjct: 509 YFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKT 568
Query: 183 DEWSYNAILA 192
+ YN A
Sbjct: 569 PQIDYNKFAA 578
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 2/225 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+E G+KP + + ++ L + + A + F+ K + P V TY++L+R G+
Sbjct: 350 MLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGK 409
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F+EM + C D+ + LL A +D +L EM G PD +Y+
Sbjct: 410 MDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNA 469
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I N R+ M + L P + TYN +++ + +EM +
Sbjct: 470 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRK 529
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
G PD SY + H A + I M ++ + + YN
Sbjct: 530 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 151/299 (50%), Gaps = 4/299 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDV 57
M G P ++ +L +LC + A + P Y+ ++ G
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKE 229
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++++A LF+EM++R D+ +N ++ A+CKA +D+A +LR+M G PD ++Y
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ + RV M ++P+V T N ++ LCK+ K+++A + D M
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G D +SY +L + + + L M + + PD H +N+++K + G DR
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDR 409
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
AT ++ M ++G P V TYS ++ LC + GK+++A + F M+D+G+ P ST L
Sbjct: 410 ATIIFNEMREQGVEPDVVTYSTVIAALC-RIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 146/315 (46%), Gaps = 39/315 (12%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+PT+ TY IL+ F ++L+ +D + ++LL +C+A EA
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 100 G-MLREMRSIGAEPDAFSYSIFIHAFC--------------------------------- 125
+L M +G PD FSY I + + C
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 126 ----EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ D++ + + M + + P++ TYNC++ LCK +++A +L +M+++G
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD W+YN+++ + + A+R+ +MT + ++PD T N ++ L + G+ A +V
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
++SM +G + +Y +M++G KG L + + F +M+ +GI P S +L
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGY-ATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402
Query: 302 GLGFLDIIEILADKM 316
G LD I+ ++M
Sbjct: 403 KCGMLDRATIIFNEM 417
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 36/316 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------------------- 39
M GI P + L+ L+ +LCK +K A FD+ +
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371
Query: 40 ---------------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
P +++L++ G L A +F+EM E+ D++ +++
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ A+C+ G +D+A +M G P +Y I FC D+ ++ M
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P++ +N II LCK +V +A + D I G +P+ YN ++ +C ++ AL
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ M + P+ Y ++ +VGR D ++ + +G PS + Y++++HGL
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611
Query: 265 CKKKGKLEEACKYFEM 280
+ + K+ EM
Sbjct: 612 FQAGRTVPAKVKFHEM 627
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 156/327 (47%), Gaps = 7/327 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + + L++ K A + + P V T + L+ L G+
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR +FD M + DI ++ +L G + + + M S G PD+ +++
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + + + M+ + P+V TY+ +I LC+ K+++A + ++MI++G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y+ ++ C ++ A L+ +M + + PD +N ++ L ++GR A
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ G +P+V Y+ ++ G C GK+E A + F++MV GI P L N
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYC-LVGKMENALRVFDVMVSAGIQPNVVVYGTLVNG 575
Query: 300 LVGLGFLD-----IIEILADKMERSTS 321
+G +D EIL ++ ST+
Sbjct: 576 YCKVGRIDEGLSLFREILHKGIKPSTT 602
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 37/321 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G++P + ++ ALC+ + A + F+ + P++ TY L++G G+
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+ L +M+ + DI N ++ +CK G + +A + SIG P+ Y+
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C + + RV D M + PNV Y ++ CK +++E L E++ +G
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR-------- 231
P YN IL A MT+ + DR+TY++VL L +
Sbjct: 597 IKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAI 656
Query: 232 ---------------------------VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ R + A +++ S+ + G PSV TYS+M+ L
Sbjct: 657 LLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNL 716
Query: 265 CKKKGKLEEACKYFEMMVDEG 285
K+G +EEA F M + G
Sbjct: 717 I-KEGLVEEADDMFSSMENAG 736
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ GI P + + L+ A K + A F+ + + P V TYS ++ L +G+
Sbjct: 382 MLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGK 441
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M+++ I ++ L++ C G++ +A ++ +M + G PD ++
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNF 501
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + D L PNV YN ++ C K+E A ++ D M+ G
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG 561
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ +C ++ L L + + + P YN++L L + GR A
Sbjct: 562 IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M + G TYS+++ GL K
Sbjct: 622 VKFHEMTESGIAMDRYTYSIVLGGLFK 648
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 122/311 (39%), Gaps = 54/311 (17%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLL--------EAMCKAG---------NIDEAHG---- 100
EA LFDE+L + PV N L A C+ G + AHG
Sbjct: 45 EAHDLFDELLHQATPVPGRQLNGFLAALARAPASAACRDGPALAVALFNRVSRAHGPRVL 104
Query: 101 -------------------------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
++ G D S + CEA
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164
Query: 136 V-LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILA 192
+ L M VP+VF+Y +++ LC + K +A +LL M E GA P+ +YN ++
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+VN A L M + + PD TYN V+ L + D+A + M +G P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL----DI 308
TY+ +++G G+ +EA + + M +GI P T+ L L G + D+
Sbjct: 285 DNWTYNSLIYGY-SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343
Query: 309 IEILADKMERS 319
+ +A K +++
Sbjct: 344 FDSMAMKGQKT 354
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 2/313 (0%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDE 69
+ + L+ ALCK + + A F ++ PT+ TY+ LV G +G L EA E
Sbjct: 255 FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKE 314
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
+ER D + + S+++ +CK G ++E EMR+ G EPDA +Y+ I F +A
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I RV M + V + TYN I+ LCK +V EAY M ERG +Y+A
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C V+ A+ L RM P+ +YN++++ L R G+ +A +E + +R
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI- 308
P V T++ +HGLC++ + + + FE MV +G P + +L + + G L++
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554
Query: 309 IEILADKMERSTS 321
+EI + + R +
Sbjct: 555 LEIFHEMVSRGVA 567
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 141/296 (47%), Gaps = 6/296 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
G +P L+ K K + AH+ + T + TY+I++ GL G ++EA
Sbjct: 354 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F M ER C ++ +++L++ C GN+ A + R M G EP+ SY+I I
Sbjct: 414 YATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 473
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN-EKVEEAYQLLDEMIERGANP 182
C A + + + + + L P+V+T+N + LC+ + V + +L + M+ +G +P
Sbjct: 474 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSP 533
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ SY+ ++ C + + L + M V PD +N +++ L GR D A EV+
Sbjct: 534 NLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 593
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTVEML 296
+E+R P +Y ++ L + + ++EEA M +G P Y TV L
Sbjct: 594 RELERRS-APDAWSYWSLLDALSRCE-RMEEARLLSFHMKLQGCAPRHYDLTVRFL 647
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
+ + L+ GL G+L A L DEM C D++A ++ +C+ +DEA +L
Sbjct: 10 RVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLER 66
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G EPD +Y++FI C+A + F++L M +P TY ++ L K +
Sbjct: 67 AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGR 126
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA +L++M+E+G +P +Y ++ V A R+ M PD Y
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186
Query: 225 VLKLLVRVGRFDRA----TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++ L ++G+ D A ++ E+ RG P V +++++ LC G LE+A YF+
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC-ASGNLEDALAYFDE 245
Query: 281 MVD 283
+ D
Sbjct: 246 LDD 248
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 5/216 (2%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M++RK VD +LL +CK G +D A +L EM PD ++++ I+ C
Sbjct: 1 MIDRKL-VDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKR 56
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ F VL+ R P+ TYN I LCK E+V++A+QLL +M E+ P +Y A
Sbjct: 57 LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ ++ A+ ++ +M ++ P TY +V+ L + GR + A ++ M G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
P Y+ ++ GL K GKL+EA Y MV+ G
Sbjct: 177 CRPDAFVYTALISGL-AKIGKLDEALVYLNQMVENG 211
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL+ LCK + A D + +P + +++++ GL L EA + + + C
Sbjct: 15 LLNGLCKTGQLDRAMLLLD--EMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGC 72
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D + +N ++ +CKA +D+A +L++M P +Y+ + +A +
Sbjct: 73 EPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMA 132
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+L+ M P + TY +I L K +VEEA ++ +M+ G PD + Y A+++
Sbjct: 133 ILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLA 192
Query: 196 DRAEVNMALRLITRMTKE----NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+++ AL + +M + V PD +N+V++ L G + A ++ ++
Sbjct: 193 KIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLD 251
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ T++ +V LCK + + EEA + + M + P T L + + LG LD
Sbjct: 252 LTHFTFNPLVAALCKAE-RTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGD-VG 58
M++ G +P++ + ++ LC+ + A+ +F+ + P V T++ + GL +
Sbjct: 455 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLD 514
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ + +LF+ M+ + ++ +++ L++ +C+AG ++ + EM S G PD ++
Sbjct: 515 TVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFN 574
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C A + V ++R + P+ ++Y ++ L + E++EEA L M +
Sbjct: 575 TLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQ 633
Query: 179 GANPDEW 185
G P +
Sbjct: 634 GCAPRHY 640
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 147/284 (51%), Gaps = 2/284 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FG P+++ + L+++LCK + A + N + P TYSIL+ G L
Sbjct: 359 FGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDV 418
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A FD M++ + A+NSL+ CK G++ A + EM + G EP A +++ I
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ + F++ + M + PNV+T+ +I LC K+ EA +L DE++ER P
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
E +YN ++ +C +++ A L+ M ++ ++PD +TY ++ L GR +A +
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFI 598
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + K+ + YS ++HG C ++G+L EA M+ GI
Sbjct: 599 DDLHKQNVKLNEMCYSALLHGYC-QEGRLMEALSASCEMIQRGI 641
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 43/331 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-------------------------------------- 22
M++ GI ++Y + L++ CK
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQ 485
Query: 23 -RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
+K K+ ++ DN TP V T++ L+ GL +++EA +LFDE++ERK +
Sbjct: 486 VQKAFKLYNKMIDNG---ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVT 542
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+N L+E C+ G ID+A +L +M G PD ++Y I C + +D +
Sbjct: 543 YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ N+ N Y+ ++ C+ ++ EA EMI+RG N D + ++ + +
Sbjct: 603 KQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRK 662
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L+ M + + PD Y ++ + G F +A E W+ M +P+V TY+ ++
Sbjct: 663 TFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM 722
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+GLC K G+++ A F+ M +PP S T
Sbjct: 723 NGLC-KAGEMDRAGLLFKRMQAANVPPNSIT 752
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G SI + L+H LCK V A + + V TY LV G + +
Sbjct: 255 GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAG 314
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L DEM+E A + L++ + K G ID+A+ ++ ++ G P+ F Y+ I++
Sbjct: 315 IQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINS 374
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ + +M NL PN TY+ +I C++ +++ A D MI+ G
Sbjct: 375 LCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGET 434
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C +++ A L MT + V P T+ ++ + + +A +++
Sbjct: 435 VYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYN 494
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M G P+V T++ ++ GLC K+ EA + F+ +V+ I P T +L
Sbjct: 495 KMIDNGITPNVYTFTALISGLCSTN-KMAEASELFDELVERKIKPTEVTYNVL 546
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 152/393 (38%), Gaps = 106/393 (26%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P+ L+ CK V+ A + ++ + TP V T++ L+ GL +
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-- 117
++EA +LFDE++ERK + +N L+E C+ G ID+A +L +M G PD ++Y
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580
Query: 118 ---------------------------------SIFIHAFCEAN---------------- 128
S +H +C+
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640
Query: 129 -------------------DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D + F +L M L P+ Y +I K ++A+
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY------- 222
+ D M+ P+ +Y A++ C E++ A L RM NV P+ TY
Sbjct: 701 ECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNL 760
Query: 223 ---------------------------NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
N++++ ++GRF AT+V M + G +P
Sbjct: 761 TKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCV 820
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TYS +++ C + G + + K ++ M++ G+ P
Sbjct: 821 TYSTLIYEYC-RSGNVGASVKLWDTMLNRGLEP 852
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 1/275 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V+T S L+ GL V + +LFDE + D ++++ +MC+ + A
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+R M + G + +Y++ IH C+ + + V S+ L +V TY ++ C+
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ E QL+DEM+E G +P E + + ++ + +++ A L+ ++ + +P+
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + G D+A ++ +M P+ TYS+++ C + G+L+ A YF+ M
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFC-RSGRLDVAISYFDRM 426
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ +GI L N G L E L +M
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 2/290 (0%)
Query: 8 PSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + L LL+ L K RK + V F ++ P T S +VR + ++ + A++
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M + I+ +N L+ +CK + EA + R + G D +Y + FC
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ +++D M P + ++ L K K+++AY+L+ ++ G P+ +
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YNA++ C +++ A L + M+ N+ P+ TY++++ R GR D A ++ M
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G +V Y+ +++G C K G L A F M ++G+ P ++T L
Sbjct: 428 QDGIGETVYAYNSLINGQC-KFGDLSAAESLFIEMTNKGVEPTATTFTSL 476
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ--FFDNAK----HEFTPTVKTYSILVRGL 54
M++ GI ++D + HA+ +K + FFD K P Y+ ++
Sbjct: 636 MIQRGI-----NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTY 690
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G +A + +D M+ +C +++ + +L+ +CKAG +D A + + M++ P++
Sbjct: 691 SKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNS 750
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+Y F+ + ++ + +M + L+ N T+N IIR CK + EA ++L E
Sbjct: 751 ITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSE 809
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M E G PD +Y+ ++ +C V +++L M + PD YN+++ G
Sbjct: 810 MTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGE 869
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
D+A E+ + M +RG P + +KKG + EA
Sbjct: 870 LDKAFELRDDMLRRGIIPD--------NKYLQKKGTIFEA 901
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 8/336 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P+ + L+H LC+ V A + + P V ++ L+ G G L EA+
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN---PNVVLFNTLINGYVSRGRLDEAK 373
Query: 65 KLFDE-MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ E ML C DI +N+L+ +CK G + A ++ EM+ G EP+ +Y+I I
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 433
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + VLD M L N YNC+I LCK+EKV++A + +M +G PD
Sbjct: 434 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 493
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N+++ C + AL L M E V+ + TYN ++ +R G A ++
Sbjct: 494 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 553
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG TY+ ++ LC + G +E+ FE M+ +G+ P + + +L N L
Sbjct: 554 DMLFRGCPLDDITYNGLIKALC-RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612
Query: 304 GFLD-IIEILADKMERSTSCTIQELANAMRG--KTG 336
G + +E L D + R + I + + G KTG
Sbjct: 613 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 648
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G P I+ + L+ LCK+ ++ A + + + + P V TY+IL+ G
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR + DEM + ++ + +N L+ A+CK + +A M +M S G +PD F+++
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ N + M ++ N TYN +I + ++EA +L+++M+ RG
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN ++ C + L L M + + P+ + N+++ L R G A
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E M RG P + TY+ +++GLC K G+ +EA F+ + EGI P + T L
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLC-KTGRAQEALNLFDKLQVEGICPDAITYNTL 675
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP I+ + L+ LCK + A + + E TY+ L+ G + EA
Sbjct: 489 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ML R CP+D + +N L++A+C+AGNI++ + +M S G P+ S +I I+
Sbjct: 549 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C +I L M L P++ TYN +I LCK + +EA L D++ G PD
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+YN ++++HC + A L++R +P+ T+ +++ ++ G
Sbjct: 669 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 145/355 (40%), Gaps = 69/355 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++Y ++ ALC V A D +H P Y L+ L VG
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267
Query: 60 LS-----------------------------------EARKLFDEMLERKCPVDILAHNS 84
++ EA KL D ML R + +
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327
Query: 85 LLEAMCKAGNIDEAHGMLRE--------------------------------MRSIGAEP 112
L+ +C+ G +DEA +L + M S+G P
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D F+Y+ I C+ + S +++ M+ PNV TY +I + CK ++EEA +L
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
DEM +G + YN +++ C +V AL + M+ + PD T+N ++ L +V
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+F+ A +++ M G + TY+ ++H ++G ++EA K M+ G P
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFL-RRGAMQEALKLVNDMLFRGCP 561
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 16 LLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ ALCK + V+ A + F D + P + T++ L+ GL V + EA L+ +ML
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+ + +N+L+ A + G + EA ++ +M G D +Y+ I A C A +I
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 584
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ + M L PN + N +I LC+ ++ A + L +MI RG PD +YN+++
Sbjct: 585 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 644
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C AL L ++ E + PD TYN ++ + G FD A + GF P+
Sbjct: 645 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704
Query: 255 STYSVMVHGLCKK 267
T+ ++V K+
Sbjct: 705 VTWYILVSNFIKE 717
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 9/275 (3%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
LD LL C + V + F++ +PTV T+ ++++ L V E+ A L +M
Sbjct: 189 LDVLLAGNCPKV---VPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTR 245
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
C + + + +L+ A+ K G ++E +L EM +G PD +++ IH C+ IH
Sbjct: 246 HGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHE 305
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+++D M PN FTY ++ LC+ KV+EA LL+++ NP+ +N ++
Sbjct: 306 AAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLIN 361
Query: 193 YHCDRAEVNMALRLI-TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+ R ++ A ++ M PD TYN ++ L + G A E+ M+ +G
Sbjct: 362 GYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCE 421
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
P+V TY++++ C K+G+LEEA + M +G+
Sbjct: 422 PNVITYTILIDRFC-KEGRLEEARNVLDEMSGKGL 455
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 42/308 (13%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ ++++ G G +A +L +M C ++N +L+ + + EM
Sbjct: 149 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 208
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY------------- 152
S G P +++ + + A C N++ S +L M R+ VPN Y
Sbjct: 209 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRV 268
Query: 153 -------------NCI---------IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
CI I LCK ++ EA +L+D M+ RG P+ ++Y +
Sbjct: 269 NEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVL 328
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW-ESMEKRG 249
+ C +V+ A L+ ++ NV+ +N ++ V GR D A V ESM G
Sbjct: 329 MHGLCRMGKVDEARMLLNKVPNPNVV----LFNTLINGYVSRGRLDEAKAVMHESMLSVG 384
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P + TY+ ++ GLC KKG L A + M +G P T +L +R G L+
Sbjct: 385 CGPDIFTYNTLILGLC-KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443
Query: 310 EILADKME 317
+ D+M
Sbjct: 444 RNVLDEMS 451
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L++ LC+ +++ A +F + H TP + TY+ L+ GL G
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
EA LFD++ +E CP D + +N+L+ CK G D+AH +L G P+ ++
Sbjct: 650 AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWY 708
Query: 119 IFIHAFCEAND 129
I + F + D
Sbjct: 709 ILVSNFIKEGD 719
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 10/297 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVG 58
M E GI P++ L+ L+ ALCK + V+ A + F + P TY L+ GL +G
Sbjct: 146 MREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++S+A++L DEM E+ ++++ SL+ +C++ N+DEA +L EM G EP+ F+YS
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C++ +L+ M R L+PN+ TY+ +I LCK K EA ++LD M +
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY-------NMVLKLLVR 231
G PD Y I++ C A I M + P+R ++ NMV++ L
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCN 385
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
RA +++ SM RG + T+ +V C K+G L +A + E M+ +G P
Sbjct: 386 NVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFC-KRGDLNKAARILEEMILDGCIP 441
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 138/275 (50%), Gaps = 3/275 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++H L + A + K E T + + RG G V +A ++F +M + +
Sbjct: 56 MIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQ 115
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND-IHSV 133
++ ++ + + + ++ A G +EMR G P S +I I A C+ + + S
Sbjct: 116 VKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESA 175
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
FR+ M P+ +TY +I LCK K+ +A +LLDEM E+G +P SY +++
Sbjct: 176 FRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHG 235
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A+ L+ M + P+ TY+ ++ L + G +A E+ E M +R P+
Sbjct: 236 LCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPN 295
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ TYS +++GLC K+GK EA + + M +G+ P
Sbjct: 296 MVTYSTLINGLC-KEGKHREAVEILDRMRLQGLKP 329
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G+ PS+ L+H LC+ ++ A + + + P V TYS L+ GL G
Sbjct: 217 MEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGH 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A +L + M+ R+ +++ +++L+ +CK G EA +L MR G +PDA Y
Sbjct: 277 SSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGR 336
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPN-------VFTYNCIIRKLCKNEKVEEAYQLL 172
I C A + +D M + PN V +N +++ LC N A+QL
Sbjct: 337 IISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLY 396
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
M RG + + +++ ++ C R ++N A R++ M + +PD +N+++
Sbjct: 397 LSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLM-----C 451
Query: 233 GRFDR 237
G +DR
Sbjct: 452 GLWDR 456
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+P+++ L+ LCK H A + + + P + TYS L+ GL G+
Sbjct: 252 MIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGK 311
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS- 118
EA ++ D M + D + ++ +C A N EA + EM G P+ S++
Sbjct: 312 HREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTF 371
Query: 119 ------IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ + C D F++ SM+ + + T++C+++ CK + +A ++L
Sbjct: 372 HVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARIL 431
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+EMI G PDE +N ++ DR +V L+ K+
Sbjct: 432 EEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQ 472
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+R+ +M V P + +Y V +LV RA ++ M ++G P+V + ++++
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
LCK + +E A + F M + G P S T L N L LG + + L D+ME
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEME 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 117/293 (39%), Gaps = 45/293 (15%)
Query: 83 NSLLEAMCKA-GNIDEAHGML---REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
NSL+E + KA +I++ M E S G D ++ IH N +L+
Sbjct: 15 NSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLE 74
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
MK+ + + I R + + +A ++ +M + P + SY + +
Sbjct: 75 RMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEEN 134
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKL------------------------------ 228
V A+ M ++ + P + N+++K
Sbjct: 135 HVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTY 194
Query: 229 ------LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
L ++G+ +A E+ + ME++G PSV +Y+ ++HGLC+ L+EA + E M+
Sbjct: 195 GTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSN-NLDEAIELLEEMI 253
Query: 283 DEGIPPYSSTVEMLRNRLVGLGF----LDIIEILADKMERSTSCTIQELANAM 331
GI P T L + L G ++++E++ + T L N +
Sbjct: 254 INGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGL 306
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M GI+P + L+ L+ ALC+ V+ A + + H P T++ L++G + G
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +M+E C + N L+ CK G +++A G +++ + G EPD +Y+
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+H C+ + +V+D M + P+VFTYN +I L KN +++EA ++++M++RG
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ + + AL L +T + + PD +T+N+++ L +VG
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++E M+ G P TY++++ LC GKL A M G P + T
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLC-SMGKLGNALDLLNEMESNGCPRSTVT 479
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 165/340 (48%), Gaps = 10/340 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y + L++ALCK + + F+ K TP TY+IL+ L +G+L A
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +EM CP + +N++++A+CK I+EA + +M + G A +++ I
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A I +++ M + L PN TYN I+ CK +++A +L+ M G D
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ C +AL+L+ M + + P YN V++ L R A ++
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + G P TY ++ LC+ G ++EA + MV++G P S+ ML L+ L
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701
Query: 304 G----FLDIIEILADKMERSTSCTIQELANAMRGKTGFRK 339
G + IE++ +K + S A+A+RG RK
Sbjct: 702 GMDDYLISAIELIIEKAKFRESD-----ASAIRGYLKIRK 736
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 43/338 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P + +H LC+ HV A + D E P V TY+ ++ L GEL EA
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++R C D N+L+ A+ ++EA + RE+ G PD ++++I I+A
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII--------------------------- 156
C+ D H R+ + MK P+ TYN +I
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476
Query: 157 --------RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
LCK ++EEA ++ D+M +G + ++N ++ C ++ A LI
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M KE + P+ TYN +L + G +A ++ E+M GF V TY +++GLC K
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLC-KA 595
Query: 269 GKLEEACKYFEMMVDEGIPP----YSSTVEML--RNRL 300
G+ + A K M +GI P Y+ ++ L RN L
Sbjct: 596 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 6/280 (2%)
Query: 48 SILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
++LV G +L +++EM R D++ N+L++A+C+A + A ML EM S
Sbjct: 170 NVLVEG----SKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS 225
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
G PD +++ + F E I + RV M P T N +I CK +VE+
Sbjct: 226 HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVED 285
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A + + I G PD+ +YN + C V+ AL+++ M +E PD TYN V+
Sbjct: 286 ALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 345
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + G D A + M RG P +T++ ++ L + +LEEA + +G+
Sbjct: 346 CLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQN-RLEEALDLARELTVKGLS 404
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQEL 327
P T +L N L +G + L ++M +S+ CT E+
Sbjct: 405 PDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEV 443
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 6/313 (1%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+I D D+LL AL ++ + A + ++A + +F P+ Y +V+ LG G L
Sbjct: 52 AISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGL 111
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHA 123
EM V + S +E+ + D+A ++ + G + D ++ ++
Sbjct: 112 VREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNV 171
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
E + + + V + M + P+V T N +I+ LC+ +V A +L+EM G PD
Sbjct: 172 LVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPD 231
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E ++ ++ + + ALR+ +M + P T N+++ ++GR + A +
Sbjct: 232 ETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQ 291
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
GF P TY+ VHGLC + G + A K ++M+ EG P T + N L
Sbjct: 292 QEIADGFEPDQVTYNTFVHGLC-QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 350
Query: 304 GFLDIIEILADKM 316
G LD + + ++M
Sbjct: 351 GELDEAKGIVNQM 363
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 154/297 (51%), Gaps = 13/297 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
M G+ PS+ + LL L KR +A FD + + TP T++IL+RG
Sbjct: 182 MKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNS 241
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS 116
+ E + F EM KC D++ +N+L++ +C+AG ++ AH ++ M +S PD +
Sbjct: 242 MVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVT 301
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ + +C ++I V + M L PN TYN +I+ LC+ +K+++ Q+ + +
Sbjct: 302 YTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGAL 361
Query: 177 ERGAN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G PD + N ++ HC+ +N AL + +M NV PD TY+++++ L + G F
Sbjct: 362 GGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNF 421
Query: 236 DRATEVWESMEKR-------GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+RA ++++ + ++ G P V+ Y M LC + GK +A + F ++ G
Sbjct: 422 ERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLC-RNGKTAKAERVFRQLMKRG 477
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 159/322 (49%), Gaps = 15/322 (4%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKT----YSILVRGLGDVGELSEARKLFDEML 71
+L L + +++ VA F + K TVK ++ L+R G G E+ ++F+ M
Sbjct: 124 MLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMK 183
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYSIFIHAFCEANDI 130
++ NSLL + K G + A + EM S G PD ++++I I FC+ + +
Sbjct: 184 SVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMV 243
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA--NPDEWSYN 188
FR M R+ P++ TYN ++ LC+ KV A+ +++ M+++ NPD +Y
Sbjct: 244 DEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYT 303
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE-SMEK 247
++ +C + E++ AL + M + + P+ TYN ++K L V + D+ +++E ++
Sbjct: 304 TLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGG 363
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
GF P T + +++ C G L +A + FE M+ + P S+T +L L G +
Sbjct: 364 GGFIPDTCTLNTLMNAHC-NAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFE 422
Query: 308 IIEILADKME------RSTSCT 323
E L D++ R CT
Sbjct: 423 RAEQLFDELSEKEILLRDDGCT 444
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 13/315 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDV 57
M F P + + L+ LC+ V +AH + + T P V TY+ LVRG
Sbjct: 253 MSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMK 312
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR-EMRSIGAEPDAFS 116
E+ EA +F+EM+ + + + +N+L++ +C+ ID+ + + G PD +
Sbjct: 313 HEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCT 372
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ ++A C A +++ V + M N+ P+ TY+ +IR LC+ E A QL DE+
Sbjct: 373 LNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELS 432
Query: 177 ER-------GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
E+ G P +Y ++ + C + A R+ ++ K D ++ +++K
Sbjct: 433 EKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGH 491
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
R G F+ E+ M +R F P + TY ++ GL +KG+ A + E M+ P
Sbjct: 492 CREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLL-QKGEPLVAYQTLEKMIKSSHVPE 550
Query: 290 SSTVEMLRNRLVGLG 304
+ST + RL+ G
Sbjct: 551 TSTFHSILARLLAKG 565
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 150/352 (42%), Gaps = 42/352 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L++A C ++ A + F+ P TYS+L+R L G A
Sbjct: 365 GFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERA 424
Query: 64 RKLFDEMLERK-------CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+LFDE+ E++ C + A+ S+ E +C+ G +A + R++ G + D S
Sbjct: 425 EQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLS 483
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ I I C + + +L M R + VP++ TY +I L + + AYQ L++MI
Sbjct: 484 FKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMI 543
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+ P+ ++++ILA + + + R I M + + + + ++LL G D
Sbjct: 544 KSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRD 603
Query: 237 RATEVWESMEKRGFY--------------------------------PSVSTYSVMVHGL 264
+A ++ + G+ + ++ GL
Sbjct: 604 KAFKIVGLLYANGYVVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGL 663
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
CK K E Y+E +V++G +E LR L G L+ ++ L+ +M
Sbjct: 664 CKMKRHSEAFGLYYE-LVEKGNNQPLRCLENLRVALEARGRLEEVKFLSKRM 714
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 157/293 (53%), Gaps = 3/293 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG+K ++ L+ AL K V+ A+ F K T+++L+ G ++
Sbjct: 214 MERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKM 273
Query: 61 SEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A K EM E CP D++++ S++EA C+ + + + +L EM G P+ +Y+I
Sbjct: 274 DNALKSMAEMKEHGFCP-DVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTI 332
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HA + +I V + MK + VP+ Y+ +I L K ++++A + ++M ++G
Sbjct: 333 VMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQG 392
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A PD +YN +++ C ++ AL+L+ +M + + PD +TY+ +LK+ R R +
Sbjct: 393 AIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLS 452
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M K V TYS++VHGLC K GKLE AC +FE MV +G+ P T
Sbjct: 453 ALLNHMFKNDISLEVGTYSLLVHGLC-KSGKLEHACLFFEEMVSKGLVPKDCT 504
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P + ++ A C+ K + + + + + P V TY+I++ LG E
Sbjct: 283 MKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKE 342
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A +++++M C D ++SL+ + KAG + +A + +M GA PD +Y+
Sbjct: 343 ISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNT 402
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + ++L M+ + P++ TY+ +++ C+N +++ LL+ M +
Sbjct: 403 MISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKND 462
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + +Y+ ++ C ++ A M + ++P T+
Sbjct: 463 ISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTH 505
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P +L+ LC+ VK A + F KH P V Y++L+ GL G+
Sbjct: 141 MIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQ 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF EM C D++ +N+LL+A+CKA ++E + MR+ G P+ ++S
Sbjct: 201 LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFST 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C ++ V SM PN +TY +I LC+ EKV +A +L ++M +
Sbjct: 261 LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRL--------------------------------- 206
PD +YN+++A +C R ++ A +L
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA 380
Query: 207 ---ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ M + + D TY +++ L R + D A EV++ M ++ F + V G
Sbjct: 381 NELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGG 440
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
LC K G +++A FE G P T +L L+ LG
Sbjct: 441 LC-KTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 158/332 (47%), Gaps = 13/332 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MVE G KP L+H L K + +K+ + + TP+++ YS LVR L
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ---TPSMQAYSSLVRALAK 127
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ A LFDEM+ D L L+ +C+AG + +A ++M G +P+
Sbjct: 128 ARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPV 187
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y++ +H C + + + MK ++ P+V TYN ++ +CK +VEE +L + M
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +++ ++ C E+ AL + M + P+++TY ++ L R +
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVI 307
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK-YFEMMVDEGIPPYSSTVEM 295
+A E++E M + P Y+ ++ G C K+G ++EA K Y EM G+ P T
Sbjct: 308 QARELFEKMTQACIPPDAVAYNSLIAGYC-KRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366
Query: 296 LRNRLVGLGFL----DIIEILADKMERSTSCT 323
L + LG L +++ + K + SCT
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 2/275 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V TYS +++ L + E+ K+ +EM+ C D+ A N +++ ++ N+++A + +
Sbjct: 10 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 69
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M G +PD SY I IH + + ++L M P++ Y+ ++R L K
Sbjct: 70 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKAR 129
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+V+ A L DEMI G +PD + ++ C +V A +M K P+ YN
Sbjct: 130 RVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++L L G+ ++A ++ M+ P V TY+ ++ +CK + ++EE CK FE M
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKAR-RVEEGCKLFEAMRA 248
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
G P T L + L G L+ +E+ +E
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 283
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 122/246 (49%), Gaps = 2/246 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ L+H LC+ ++ A + F + + P TY+ L+ GL ++ +A
Sbjct: 250 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYSIFIH 122
R+LF++M + P D +A+NSL+ CK G++DEA + REM G +P +++ I
Sbjct: 310 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLID 369
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC+ + ++ M L + TY +I L + K++EA ++ +M E+
Sbjct: 370 GFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLL 429
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D S + + C ++ A + K +P+ T+ ++ + L+++GR + A ++
Sbjct: 430 DPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
Query: 243 ESMEKR 248
E + R
Sbjct: 490 EPAKAR 495
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M + I P + L+ CKR + A + + + PT+ T++ L+ G +G
Sbjct: 316 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 375
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L A +L EM + D + L+ + +A +DEA + ++MR D S
Sbjct: 376 KLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 435
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
F+ C+ +I + V ++ ++ VPN T+ + L K +VE+A +L++ R
Sbjct: 436 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 495
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + ++ A CK + + A + A P + +Y++++ GL G++ E
Sbjct: 233 GCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKET 292
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM +R+ D + N+L+ C GN +A + EM G P+ +Y+ I++
Sbjct: 293 SEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINS 352
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ LD M+ L PN TY +I + +++AYQ++ EM+E G P
Sbjct: 353 MCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPT 412
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ HC + A L+ M + +PD +Y+ ++ R ++A ++
Sbjct: 413 IITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKV 472
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P V+TYS ++ GLCK++ +L E C F+ M+ G+PP T L N
Sbjct: 473 EMVAKGISPDVATYSSLIQGLCKQR-RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531
Query: 304 GFLDIIEILADKM 316
G LD L D+M
Sbjct: 532 GDLDKALRLHDEM 544
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 8/317 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKH-VKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
+G P + + +L A+ + K VK+A F + + +P V TY+IL+RG G L
Sbjct: 161 YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLE 220
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
F EM C +++ +N++++A CK I EA +LR M G P+ SY++ I
Sbjct: 221 MGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C + +L+ M + VP+ T+N +I C +A L EM++ G +
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y ++ C +N A+ + +M + P+ TY ++ + G +A ++
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE-ML 296
+ M + GF P++ TY+ +++G C G++E+A + M++ G P YS+ +
Sbjct: 401 MKEMVENGFTPTIITYNALINGHC-ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC 459
Query: 297 RNRLVGLGFLDIIEILA 313
RN+ + F +E++A
Sbjct: 460 RNQELEKAFQLKVEMVA 476
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 148/319 (46%), Gaps = 36/319 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + +++ LC+ +K + + +K + P T++ L+ G +VG +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM++ +++ + +L+ +MCKAGN++ A L +MR G P+ +Y+ I
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNC----------------------------- 154
F + + ++++ M P + TYN
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 155 ------IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
II C+N+++E+A+QL EM+ +G +PD +Y++++ C + + L
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD TY ++ G D+A + + M ++GF P + TY+V+++G K+
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567
Query: 269 GKLEEACKYFEMMVDEGIP 287
E +++ +E +P
Sbjct: 568 RTKEAKRLLLKLLYEESVP 586
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 20/282 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G P+I + L++ C ++ A + F P V +YS ++ G E
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +L EM+ + D+ ++SL++ +CK + E + +EM S+G PD +Y+
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+A+C D+ R+ D M + P++ TYN +I K + +EA +LL +++
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583
Query: 180 ANPDEWSYN---------------AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ P+E +YN A++ C + +N A R++ M ++ + YN+
Sbjct: 584 SVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNV 643
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
++ +VG ++A +++ M GF P +SV + L K
Sbjct: 644 IIHGHSKVGNIEKAYNLYKEMLHSGFAP----HSVTIMALAK 681
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK-VEEAYQLLDEM 175
+ + + + N I+ +++ K Y +P V +YN I+ + + ++ V+ A + EM
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+E G +P+ ++YN ++ C + M L M + +P+ TYN ++ ++ +
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A ++ M +G P++ +Y+V+++GLC ++G+++E + E M P T
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLC-REGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 296 LRNRLVGLG 304
L N +G
Sbjct: 314 LINGYCNVG 322
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 16/189 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P L++A C + A + D + F+P + TY++L+ G
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSR 568
Query: 60 LSEARKLFDEML-ERKCPVDILAHN--------------SLLEAMCKAGNIDEAHGMLRE 104
EA++L ++L E P +I + +L++ C G ++EA +L
Sbjct: 569 TKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLES 628
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M G + + Y++ IH + +I + + M P+ T + + L K
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688
Query: 165 VEEAYQLLD 173
E QLLD
Sbjct: 689 EVELNQLLD 697
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+++V+K RV ++A + + GF P V +Y+ ++ + + K ++ A F+
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
MV+ G+ P T +L G L++ +MER+
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERN 232
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 159/313 (50%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + ++ A CK + + A + A P + +Y++++ GL G++ E
Sbjct: 233 GCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKET 292
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM +R+ D + N+L+ C GN +A + EM G P+ +Y+ I++
Sbjct: 293 SEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINS 352
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ LD M+ L PN TY +I + +++AYQ++ EM+E G P
Sbjct: 353 MCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPT 412
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ HC + A L+ M + +PD +Y+ ++ R ++A ++
Sbjct: 413 IITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKV 472
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P V+TYS ++ GLCK++ +L E C F+ M+ G+PP T L N
Sbjct: 473 EMVAKGISPDVATYSSLIQGLCKQR-RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531
Query: 304 GFLDIIEILADKM 316
G LD L D+M
Sbjct: 532 GDLDKALRLHDEM 544
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 177/384 (46%), Gaps = 52/384 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ L++++CK ++ A +F D + P +TY+ L+ G G
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A ++ EM+E I+ +N+L+ C G +++A G+L+EM G PD SYS
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ F++ M + P+V TY+ +I+ LCK ++ E L EM+ G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE +Y +++ +C +++ ALRL M ++ PD TYN+++
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL+++ G + A V ESM ++G
Sbjct: 574 RLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKG 633
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
+ + Y+V++HG K G +E+A ++ M+ G P+S T+ L L G +
Sbjct: 634 YKLNEEVYNVIIHG-HSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVEL 692
Query: 310 EILADKMERSTSCTIQELANAMRG 333
L D +S T LA + G
Sbjct: 693 NQLLDYTLKSCRITEAALAKVLIG 716
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 8/317 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKH-VKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
+G P + + +L A+ + K VK+A F + + +P V TY+IL+RG G L
Sbjct: 161 YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLE 220
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
F EM C +++ +N++++A CK I EA +LR M G P+ SY++ I
Sbjct: 221 MGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C + +L+ M + VP+ T+N +I C +A L EM++ G +
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y ++ C +N A+ + +M + P+ TY ++ + G +A ++
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE-ML 296
+ M + GF P++ TY+ +++G C G++E+A + M++ G P YS+ +
Sbjct: 401 MKEMVENGFTPTIITYNALINGHC-ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFC 459
Query: 297 RNRLVGLGFLDIIEILA 313
RN+ + F +E++A
Sbjct: 460 RNQELEKAFQLKVEMVA 476
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G P+I + L++ C ++ A + F P V +YS ++ G E
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +L EM+ + D+ ++SL++ +CK + E + +EM S+G PD +Y+
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+A+C D+ R+ D M + P++ TYN +I K + +EA +LL +++
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583
Query: 180 ANPDEWSYN---------------AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ P+E +YN A++ C + +N A R++ M ++ + YN+
Sbjct: 584 SVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNV 643
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH---------------------- 262
++ +VG ++A +++ M GF P T +
Sbjct: 644 IIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSC 703
Query: 263 ------------GLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
G+ K+G ++ + M G+ PYSS
Sbjct: 704 RITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSS 744
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK-VEEAYQLLDEM 175
+ + + + N I+ +++ K Y +P V +YN I+ + + ++ V+ A + EM
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+E G +P+ ++YN ++ C + M L M + +P+ TYN ++ ++ +
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A ++ M +G P++ +Y+V+++GLC ++G+++E + E M P T
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLC-REGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 296 LRNRLVGLG 304
L N +G
Sbjct: 314 LINGYCNVG 322
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+++V+K RV ++A + + GF P V +Y+ ++ + + K ++ A F+
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
MV+ G+ P T +L G L++ +MER+
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERN 232
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ +GI P + + L++ K V +A + + +++ P V +Y+ILV G +G+
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + +EM + + N L+ A CK I EA + REM G +PD ++++
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I CE ++I +L M +V N TYN +I + +++EA +L++EM+ +G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ DE +YN+++ C EV+ A L +M ++ P + N+++ L R G + A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E + M RG P + T++ +++GLC+ G++E+ F + EGIPP + T L +
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRA-GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 300 LVGLGFL 306
L GF+
Sbjct: 679 LCKGGFV 685
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 153/307 (49%), Gaps = 17/307 (5%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---------HEFTPTVKTYSILVRGLGDV 57
KP I + L+H V H D+AK + P V TY+ L+ G
Sbjct: 350 KPEIVIFNTLIHGF-------VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + A ++ +M + C ++ ++ L++ CK G IDEA+ +L EM + G +P+ +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I AFC+ + I + M R P+V+T+N +I LC+ ++++ A LL +MI
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN ++ R E+ A +L+ M + D TYN ++K L R G D+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++E M + G PS + +++++GLC + G +EEA ++ + MV G P T L
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLC-RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 298 NRLVGLG 304
N L G
Sbjct: 642 NGLCRAG 648
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ + L+ A CK + A + F + + P V T++ L+ GL +V E+ A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M+ + + +N+L+ A + G I EA ++ EM G+ D +Y+ I
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A ++ + + M R P+ + N +I LC++ VEEA + EM+ RG+ PD
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ C + L + ++ E + PD T+N ++ L + G A + +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK 268
+ GF P+ T+S+++ + ++
Sbjct: 694 EGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT K+Y++++ L A +F +ML RK P + +++A C ID A +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR+M G P++ Y IH+ + N ++ ++L+ M VP+ T+N +I LCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-------- 213
+++ EA ++++ M+ RG PD+ +Y ++ C V+ A L R+ K
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 214 ------------------------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++PD TYN ++ + G A EV M +G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V +Y+++V G C K GK++EA M +G+ P
Sbjct: 420 CKPNVYSYTILVDGFC-KLGKIDEAYNVLNEMSADGLKP 457
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 13/332 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G P + ++ LCK + A + + F P TY L+ GL +G
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYS 118
+ A+ LF R +I+ N+L+ G +D+A +L +M S G PD +Y+
Sbjct: 338 VDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ + + + VL M+ PNV++Y ++ CK K++EAY +L+EM
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +N +++ C + A+ + M ++ PD +T+N ++ L V A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M G + TY+ +++ ++ G+++EA K MV +G P T L
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRR-GEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 299 RLVGLGFLDIIEILADKMER------STSCTI 324
L G +D L +KM R + SC I
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP +Y + L+ LC+ +K A D TY+ L+ GE+ EA
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RKL +EM+ + P+D + +NSL++ +C+AG +D+A + +M G P S +I I+
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + M P++ T+N +I LC+ ++E+ + ++ G PD
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
++N ++++ C V A L+ ++ +P+ T++++L+ ++ DR
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 15/246 (6%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C ++N +LE + A + +M S P F++ + + AFC N+I S
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M ++ VPN Y +I L K +V EA QLL+EM G PD ++N ++
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +N A +++ RM PD TY ++ L ++GR D A +++ + K P +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEI 353
Query: 255 STYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEML-----RNRLVGLGFLDI 308
++ ++HG G+L++A +M+ GI P T L + LVGL
Sbjct: 354 VIFNTLIHGFV-THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA---- 408
Query: 309 IEILAD 314
+E+L D
Sbjct: 409 LEVLHD 414
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 8/340 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P+ + L+H LC+ V A + + P V ++ L+ G G L
Sbjct: 331 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN---PNVVLFNTLINGYVSRGRL 387
Query: 61 SEARKLFDE-MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA+ + E ML C DI +N+L+ +CK G + A ++ EM+ G EP+ +Y+I
Sbjct: 388 DEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTI 447
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + VLD M L N YNC+I LCK+EKV++A + +M +G
Sbjct: 448 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 507
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++N+++ C + AL L M E V+ + TYN ++ +R G A
Sbjct: 508 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 567
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M RG TY+ ++ LC + G +E+ FE M+ +G+ P + + +L N
Sbjct: 568 KLVNDMLFRGCPLDDITYNGLIKALC-RAGNIEKGLALFEDMMSKGLNPNNISCNILING 626
Query: 300 LVGLGFLD-IIEILADKMERSTSCTIQELANAMRG--KTG 336
L G + +E L D + R + I + + G KTG
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 666
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G P I+ + L+ LCK+ ++ A + + + + P V TY+IL+ G
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR + DEM + ++ + +N L+ A+CK + +A M +M S G +PD F+++
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ N + M ++ N TYN +I + ++EA +L+++M+ RG
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +YN ++ C + L L M + + P+ + N+++ L R G A
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E M RG P + TY+ +++GLC K G+ +EA F+ + EGI P + T L
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLC-KTGRAQEALNLFDKLQVEGICPDAITYNTL 693
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP I+ + L+ LCK + A + + E TY+ L+ G + EA
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ML R CP+D + +N L++A+C+AGNI++ + +M S G P+ S +I I+
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C +I L M L P++ TYN +I LCK + +EA L D++ G PD
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+YN ++++HC + A L++R +P+ T+ +++ ++ G
Sbjct: 687 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 145/355 (40%), Gaps = 69/355 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++Y ++ ALC V A D +H P Y L+ L VG
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285
Query: 60 LS-----------------------------------EARKLFDEMLERKCPVDILAHNS 84
++ EA KL D ML R + +
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345
Query: 85 LLEAMCKAGNIDEAHGMLRE--------------------------------MRSIGAEP 112
L+ +C+ G +DEA +L + M S+G P
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D F+Y+ I C+ + S +++ M+ PNV TY +I + CK ++EEA +L
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
DEM +G + YN +++ C +V AL + M+ + PD T+N ++ L +V
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+F+ A +++ M G + TY+ ++H ++G ++EA K M+ G P
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFL-RRGAMQEALKLVNDMLFRGCP 579
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 16 LLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ ALCK + V+ A + F D + P + T++ L+ GL V + EA L+ +ML
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+ + +N+L+ A + G + EA ++ +M G D +Y+ I A C A +I
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 602
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ + M L PN + N +I LC+ ++ A + L +MI RG PD +YN+++
Sbjct: 603 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 662
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C AL L ++ E + PD TYN ++ + G FD A + GF P+
Sbjct: 663 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722
Query: 255 STYSVMVHGLCKK 267
T+ ++V K+
Sbjct: 723 VTWYILVSNFIKE 735
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 9/275 (3%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
LD LL C + V + F++ +PTV T+ ++++ L V E+ A L +M
Sbjct: 207 LDVLLAGNCPKV---VPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTR 263
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
C + + + +L+ A+ K G ++E +L EM +G PD +++ IH C+ IH
Sbjct: 264 HGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHE 323
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+++D M PN FTY ++ LC+ KV+EA LL+++ NP+ +N ++
Sbjct: 324 AAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLIN 379
Query: 193 YHCDRAEVNMALRLI-TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+ R ++ A ++ M PD TYN ++ L + G A E+ M+ +G
Sbjct: 380 GYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCE 439
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
P+V TY++++ C K+G+LEEA + M +G+
Sbjct: 440 PNVITYTILIDRFC-KEGRLEEARNVLDEMSGKGL 473
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 42/308 (13%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ ++++ G G +A +L +M C ++N +L+ + + EM
Sbjct: 167 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 226
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY------------- 152
S G P +++ + + A C N++ S +L M R+ VPN Y
Sbjct: 227 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRV 286
Query: 153 -------------NCI---------IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
CI I LCK ++ EA +L+D M+ RG P+ ++Y +
Sbjct: 287 NEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVL 346
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW-ESMEKRG 249
+ C +V+ A L+ ++ NV+ +N ++ V GR D A V ESM G
Sbjct: 347 MHGLCRMGKVDEARMLLNKVPNPNVV----LFNTLINGYVSRGRLDEAKAVMHESMLSVG 402
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P + TY+ ++ GLC KKG L A + M +G P T +L +R G L+
Sbjct: 403 CGPDIFTYNTLILGLC-KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461
Query: 310 EILADKME 317
+ D+M
Sbjct: 462 RNVLDEMS 469
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L++ LC+ +++ A +F + H TP + TY+ L+ GL G
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
EA LFD++ +E CP D + +N+L+ CK G D+AH +L G P+ ++
Sbjct: 668 AQEALNLFDKLQVEGICP-DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWY 726
Query: 119 IFIHAFCEAND 129
I + F + D
Sbjct: 727 ILVSNFIKEGD 737
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 164/314 (52%), Gaps = 5/314 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M +G PS+ + ++ CK K K + P T++IL+ G
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A+K+F+EM + +++ +NSL+ +C G +DEA G+ +M +G +P+ +Y+
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + +LD + + L PNV T+N +I K ++++A+ L M++ G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C V A +L M + D TYN+++ L + G +A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 240 EVWESM---EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + M EK+G ++ TY+V++ G C K GKLEEA + M+++G+ P +T ++L
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNK-GKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Query: 297 RNRLVGLGFLDIIE 310
R+ ++ GF+ I+
Sbjct: 554 RDEMMEKGFIPDID 567
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 165/333 (49%), Gaps = 9/333 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
++G + S + +L +L K + V + + + V T+ +++ GL VG+
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A + ++M ++ +N++++ CKAG + +A +L+EM + P+ +++I I
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC ++ + +V + M+R L PNV TYN +I LC N K++EA L D+M G
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +YNA++ C + + A ++ + K + P+ T+N ++ + GR D A +
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M G P+VSTY+ ++ G C ++G ++EA K + M G+ T +L + L
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFC-REGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485
Query: 302 GLG-------FLDIIEILADKMERSTSCTIQEL 327
G LD + ++ K R+ T L
Sbjct: 486 KKGETRKAVRLLDEMTLMEKKGRRANIVTYNVL 518
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 23/340 (6%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD----NAKHEFTPTVKTYSIL-------- 50
EFG ++ +LLH L K+ D NA + + + S+L
Sbjct: 100 EFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANS 159
Query: 51 ------VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
V GE+ A + FD + + L+ N +L ++ K G I + +E
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219
Query: 105 M--RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
M R IG + ++ + I+ C+ V++ MK + P+V TYN II CK
Sbjct: 220 MIRRRIGV--NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
K+ +A LL EM+ + +P+E ++N ++ C V A ++ M ++ + P+ TY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ L G+ D A + + M G P+V TY+ +++G CKKK L+EA + + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK-MLKEAREMLDDIG 396
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
G+ P T L + G +D +L M + C
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA----KHEFTPTVKTYSILVRGLGDVGEL 60
G+K + + L+ ALCK+ + A + D K + TY++L++G + G+L
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKL 528
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
EA +L +EMLE+ + ++ L + M + G I + G L
Sbjct: 529 EEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 570
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 2/287 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
E ++ Y D L+ LC R A D + P V TY+IL+
Sbjct: 153 ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 212
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A KL DEM ++ C DI+ +N ++ +C+ G +D+A L+ + S G EP+ SY+I +
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C A ++ M + PNV T+N +I LC+ VE A ++L+++ + G +
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ SYN +L C + +++ A+ + M PD +YN +L L R G D A E+
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ +G P + +Y+ ++ GL K GK +EA + MV +G+ P
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGL-TKAGKTKEALELLNEMVSKGLQP 438
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P + LL A CKR K A + D + + TP + TY+++V G+ G + +A +
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ C + +++N +L+ +C A ++A ++ EM G P+ ++++ I C
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ VL+ + +Y PN +YN ++ CK +K+++A LD M+ RG PD S
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C EV++A+ L+ ++ + P +YN V+ L + G+ A E+ M
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+G P + TYS + GLC++ ++E+A + F + D GI P
Sbjct: 433 SKGLQPDIITYSTIAAGLCRED-RIEDAIRAFGKVQDMGIRP 473
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P + + ++ C V A ++ A+ T L+RGL G + A +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWC--AERAVERDAYTCDTLIRGLCGRGRTANALAVL 183
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
DEML R+C D++ + LLEA CK +A +L EMR G PD +Y++ ++ C+
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ L ++ Y PN +YN +++ LC E+ E+A +L+ EM ++G P+ ++
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++++ C + V AL ++ ++ K P+ +YN +L + + D+A + M
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
RG YP + +Y+ ++ LC + G+++ A + + D+G P Y++ ++ L
Sbjct: 364 RGCYPDIVSYNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +++ +C+ V A +F N + P +Y+I+++GL
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ CP +++ N L+ +C+ G ++ A +L ++ G P++ SY+
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ + LD M P++ +YN ++ LC++ +V+ A +LL ++ ++G
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN ++ + AL L+ M + + PD TY+ + L R R + A
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++ G P+ Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 461 RAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLFAYMIGNGCMPNESTYTIL--- 516
Query: 300 LVGLGFLDIIE 310
+ GL + +I+
Sbjct: 517 IEGLAYEGLIK 527
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 12/274 (4%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCP 76
L +L +R + A + +A+ P T + L++ L G +EAR++ C
Sbjct: 74 LRSLVRRGELDEALRLVGSARR---PDAGTCAALIKKLSASGRTAEARRVL-----AACG 125
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
D++A+N+++ C AG +D A E R++ E DA++ I C + V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAE-RAV--ERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
LD M R VP+V TY ++ CK ++A +LLDEM ++G PD +YN ++ C
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
V+ A+ + + P+ +YN+VLK L R++ A E+ M ++G P+V T
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+++++ LC +KG +E A + E + G P S
Sbjct: 303 FNMLISFLC-RKGLVEPALEVLEQIPKYGCSPNS 335
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P++ + L+ LC++ V+ A + + K+ +P +Y+ L+ +
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A D M+ R C DI+++N+LL A+C++G +D A +L +++ G P SY+
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M L P++ TY+ I LC+ +++E+A + ++ + G
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YNAI+ C R E + A+ L M MP+ TY ++++ L G A
Sbjct: 471 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 530
Query: 240 EVWESMEKRG 249
++ + + RG
Sbjct: 531 DLLDELCSRG 540
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 145/286 (50%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P+ Y ++ CK V A + FD K E P Y+ L+ G D G+L
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A D M+ER + + +N L+ A+ G EA+ ++ EM G PD F+Y+I I+
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ + ++M R + V TY +I L K +V+E +L DE + RG P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ H ++ A ++ M K+ + PD TYN +++ L +GR D A ++
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M +RG P + TY+ ++ G KG +++A + M+++G P
Sbjct: 416 DEMTERGIQPDLVTYNTLISGY-SMKGDVKDALRIRNEMMNKGFNP 460
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ ++ + L+HAL A++ + P V TY+IL+ G G
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ M R ++ + +L+ A+ K G + E + E G PD Y+
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 362
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ + +I F ++ M++ + P+ TYN ++R LC +V+EA +L+DEM ERG
Sbjct: 363 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 422
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +++ + + +V ALR+ M + P TYN +++ L + G+ D A
Sbjct: 423 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 482
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M + G P STY ++ GL
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGL 507
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A LF +M + P+ N +L +C AG A +LR+M P+A +Y+
Sbjct: 96 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 151
Query: 121 IHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + ++ M+ R + PN +TY +I CK +V+EA ++ DEM+ +G
Sbjct: 152 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 211
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ YNA++ +CD+ +++ AL RM + V TYN+++ L GR A
Sbjct: 212 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 271
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ E M +G P V TY+++++G C K+G +++A + FE M G+
Sbjct: 272 YELVEEMGGKGLAPDVFTYNILINGHC-KEGNVKKALEIFENMSRRGV 318
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H A F + M R L T+N ++R LC K A +LL +M
Sbjct: 86 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----P 141
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++A C R V AL ++ M + + P+++TY V+ +VGR D A
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 240 EVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V++ M +G P Y+ ++ G C +GKL+ A Y + MV+ G+ +T +L
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIGGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLL 258
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N +L + C + AL L+ +M + N + TYN V+ GR A ++ M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 171
Query: 246 EKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGL 303
+RG P+ TY ++ G C K G+++EA K F+ M+ +G + P + L
Sbjct: 172 RERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230
Query: 304 GFLDIIEILADKM-ERSTSCTI 324
G LD + D+M ER + T+
Sbjct: 231 GKLDTALLYRDRMVERGVAMTV 252
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 156/289 (53%), Gaps = 3/289 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + L+ + + K V+ F++ K + F P V++YSIL+ GL G+ E
Sbjct: 19 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 78
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F M +R +D A+N++++ CK+G +D+A+ L EM+ P +Y I
Sbjct: 79 SSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDG 138
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + + + + K + NV Y+ +I K +++EAY +L+EM+++G P+
Sbjct: 139 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPN 198
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N+++ E+N AL M + P+ +TY++++ L RV ++++A W+
Sbjct: 199 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 258
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPPYSS 291
M+K+G P+V TY+ M+ GL K G + +AC FE + GIP +S
Sbjct: 259 EMQKQGLVPNVVTYTTMISGLA-KVGNITDACSLFERFKANGGIPDAAS 306
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ ++ CK V A++ + K PTV TY ++ GL + L EA LF+E
Sbjct: 98 NAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 157
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ ++++ ++SL++ K G IDEA+ +L EM G P+ ++++ + A +A +I+
Sbjct: 158 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINE 217
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
SMK PN +TY+ +I LC+ +K +A+ EM ++G P+ +Y +++
Sbjct: 218 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIS 277
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ A L R +PD ++N +++ + R A V+E RG
Sbjct: 278 GLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRG 334
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 1/209 (0%)
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G ++ H + +EM G +PD + ++ +A D+ + + +K Y +P+V +Y
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
+ +I L K + E + M +RG D +YNA++ C +V+ A + M
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++V P TY ++ L ++ R D A ++E + +G +V YS ++ G K G+++
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF-GKVGRID 181
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
EA E M+ +G+ P T L + LV
Sbjct: 182 EAYLILEEMMKKGLAPNVYTWNSLMDALV 210
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+ P++Y + L+ AL K + + A F + K + +P TYSIL+ GL V +
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + EM ++ +++ + +++ + K GNI +A + ++ G PDA S++
Sbjct: 250 YNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
I AN + V + + NV ++ L K E +E+A
Sbjct: 310 LIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQA 358
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E+ +++ EM RG PD N + +V + + +PD +Y+++
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 65
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + G+ + ++ +M++RGF Y+ +V G CK GK+++A + E M +
Sbjct: 66 IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKS-GKVDKAYEALEEMKVKH 124
Query: 286 IPPYSSTVEMLRNRLVGLGFLD 307
+PP +T + + L + LD
Sbjct: 125 VPPTVATYGSIIDGLAKIDRLD 146
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 3/304 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G ++ + +++ C+ ++ A + + F P T++ L+R L G + +A
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP--FPPDTFTFNPLIRALCVRGRIPDA 270
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+FD+ML R C ++ ++ LL+A CK +A +L EMR+ G EPD +Y++ I+A
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C D+ +L ++ + P+ TY +++ LC +E+ +E +LL EM PD
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E ++N I+ C + V+ A+ ++ M++ + D TY+ +L L VGR D A E+
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ G P Y+ ++ GLC + + E A + M+ PP T + L
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTE-QWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509
Query: 304 GFLD 307
G +D
Sbjct: 510 GLVD 513
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 161/357 (45%), Gaps = 38/357 (10%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
P + + L+ ALC R + A FD+ H +P+V TYSIL+ +A
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMA 307
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L DEM + C DI+ +N L+ AMC G++DEA +L + S G +PDA +Y+ + + C
Sbjct: 308 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ V +L M N P+ T+N I+ LC+ V+ A +++D M E G D
Sbjct: 368 GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIV 427
Query: 186 SYNAILAYHCDRAEVNMALRLITR-----------------------------------M 210
+Y++IL CD V+ A+ L++R M
Sbjct: 428 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ PD T+N V+ L + G DRA V E M + G P + TY+ ++ GLC +
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESC- 546
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQEL 327
+++A + + G P T L L G+ + E L M RS +C EL
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS-NCPPDEL 602
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 148/329 (44%), Gaps = 33/329 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M P + ++ +LC++ V A + D+ ++H + TYS ++ GL DVG
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L + C D +A+ ++L+ +C + A ++ EM PD +++
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C+ + RV++ M P++ TYNCII LC +++A +LL ++ G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N +L C A +L+ M + N PD T+N V+ L + G +A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------K 267
E + M + G P+ STYS++V L K K
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTK 681
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEML 296
GK+EEA +MV G+ P ++T L
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSL 710
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 4/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M E G P I + ++ LC + A + + + P + T++ L++GL V
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L M+ CP D L N+++ ++C+ G + +A L+ M G P++ +YSI
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSI 641
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A + +L M N P++ TYN +I L K K+EEA LL M+ G
Sbjct: 642 VVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNG 699
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ C + A+R++ R+ + PD YN VL R R D A
Sbjct: 700 LCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAI 759
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + M G P STY +++ L G L+EA + + G+
Sbjct: 760 DCFAHMVSSGCMPDESTYVILLEAL-AYGGLLDEAKRLLASLCSLGV 805
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 51 VRGLGDVGELSEARKLFDEMLE---RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
+R L GE+ EA LFD M R CP ++ N L++ +C G + +A R +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCP-PVVPCNILIKRLCSDGRVSDAE---RVFAA 212
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
+G +Y+ ++ +C A I R+++ M P+ FT+N +IR LC ++ +
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPD 269
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A + D+M+ RG +P +Y+ +L C + A+ L+ M + PD TYN+++
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ G D A + ++ G P TY+ ++ LC + + +E + M
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSE-RWKEVEELLAEMTSNNCA 388
Query: 288 PYSSTVEMLRNRLVGLGFLD-IIEIL 312
P T + L G +D IE++
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVV 414
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 3/217 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ P + ++ +LC++ + A + A++ P TYSI+V L G+
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK 651
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L M D++ +N+++ + KAG ++EA +LR M S G PD +Y
Sbjct: 652 AQAALELLSGMTNGT--PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRS 709
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + R+L ++ L P+ YN ++ C++ + + A M+ G
Sbjct: 710 LAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSG 769
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PDE +Y +L ++ A RL+ + V+
Sbjct: 770 CMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 157/305 (51%), Gaps = 19/305 (6%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
G+ PS+ + LL L KR +AH FD + TP T++IL+RG + E
Sbjct: 127 GVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDE 186
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH----GMLREMRSIGAEPDAFSYS 118
+ F EM C D++ +N+L++ +C+AG + AH GM+++M+ + PD +Y+
Sbjct: 187 GFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDL--SPDVVTYT 244
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-E 177
+ +C +I V + M L PN TYN +I+ LC+ +K ++ ++L +
Sbjct: 245 TLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGG 304
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD +YN ++ CD + AL++ +M + V PD TY+++++ L + G F+R
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364
Query: 238 ATEVWESMEKR-------GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PP 288
A ++++ + G P V+ Y+ + LC K GK +A + F ++ +G PP
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLC-KNGKTHKAERVFRQLMKKGTQDPP 423
Query: 289 YSSTV 293
T+
Sbjct: 424 SYKTL 428
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 159/322 (49%), Gaps = 15/322 (4%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKT----YSILVRGLGDVGELSEARKLFDEML 71
+L L + ++ +A F + + +VK + L+R G+ G +EA KLF M
Sbjct: 65 MLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMK 124
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDI 130
++ NSLL + K G + AH + EM + G PD ++++I I FC+ + +
Sbjct: 125 SSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMV 184
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE--RGANPDEWSYN 188
FR M R+N P+V TYN ++ LC+ KV A+ ++ M++ + +PD +Y
Sbjct: 185 DEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYT 244
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW-ESMEK 247
++ +C + E++ AL + M + P+ TYN ++K L V +FD+ E+ ++
Sbjct: 245 TLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGG 304
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RGF P TY+ +++ C G +EA K F+ M + + P S+T +L L G +
Sbjct: 305 RGFVPDTCTYNTLMNAQC-DAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFE 363
Query: 308 IIEILADKME------RSTSCT 323
E L DK+ R CT
Sbjct: 364 RAEQLFDKLSDEDILLRDDGCT 385
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 139/314 (44%), Gaps = 17/314 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------FTPTVKTYSILVR 52
M E ++P L+ LC+R + A Q FD E TP V Y+ +
Sbjct: 337 MKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFD 396
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L G+ +A ++F +++ +K D ++ +L+ CK G + + +L M P
Sbjct: 397 FLCKNGKTHKAERVFRQLM-KKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVP 455
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +Y + I+ F + + ++ L+ M + + +P ++ I+ +L KN+ E+ +
Sbjct: 456 DFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFV 515
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM--VLKLLV 230
MI+R + N L+ H R LR+ E + + + +M ++ +
Sbjct: 516 VLMIDR-----KIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFIC 570
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ G+ A ++ ++G ++ +V++ GLCK K LE Y+ M+V++
Sbjct: 571 QNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYY-MLVEKSNHQQL 629
Query: 291 STVEMLRNRLVGLG 304
S +E LR L G
Sbjct: 630 SCLEGLRTALEAGG 643
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 159/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+KP++ + +++ +CK ++ A + FD E P +Y+ LV G G
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F EM ++ D++ SL+ MCKAGN++ A ++R+MR G + + +++
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + + MK+ + P+V YN +I C +++EA +LL EM +G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ I++ +C + + A L +M ++ V+PD TY+ ++++L R A
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++M K G P TY+ ++ G C K+G +E A + MV G+ P T +L N
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHC-KEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Query: 300 L 300
L
Sbjct: 550 L 550
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++Y + L+ ALC R H K A D P V TY+ LV GE
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M E +++ NS++ MCKAG +++A + EM G PD SY+
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNT 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+A H V M + ++P+V T+ +I +CK +E A L+ +M ERG
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+E ++ A++ C + ++ AL + M + + P YN ++ VGR D A
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E+ ME +G P V TYS ++ C K A + + M+++G+ P YSS + +
Sbjct: 421 ELLHEMEAKGLKPDVVTYSTIISAYC-KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 479
Query: 296 L 296
L
Sbjct: 480 L 480
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 144/278 (51%), Gaps = 2/278 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P+V Y+ ++ L D L+ AR+ FD ML ++ +N L+ A+C G+ EA
Sbjct: 152 YVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+LR+MR G P+ +Y+ + AF A ++ R++ M+ L PN+ T+N ++ +
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK K+E+A ++ DEM+ G PD SYN ++ +C + AL + MT++ +MPD
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T+ ++ ++ + G +RA + M +RG + T++ ++ G C KKG L++A
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFC-KKGFLDDALLAVR 389
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
M I P L N +G +D L +ME
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 53/350 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI P + L+H +CK +++ A + T++ L+ G G
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A M + + ++ +N+L+ C G +DEA +L EM + G +PD +YS
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ D HS F + M ++P+ TY+ +IR LC +++ +A+ L MI+ G
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y +++ HC V AL L +M K V+PD TY++++
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL ++ G + A +V++SM R
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 620
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
+ S YSV++HG C + G + +A + + M+ G P S ST+ ++R
Sbjct: 621 WNLDGSVYSVLIHGHC-RAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 138/295 (46%), Gaps = 19/295 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IKPS+ + L++ C + A + + + P V TYS ++ + A
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +MLE+ D + ++SL+ +C + +AH + + M +G +PD F+Y+ I
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++ S + D M + ++P+V TY+ +I L K+ + EA QLL ++ P
Sbjct: 516 CKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN 575
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMP----------------DRHTYNMVLKL 228
Y+A++ + C +AE+ L L+ + +M D Y++++
Sbjct: 576 TKYDALM-HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 634
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
R G +A + M + GF P+ ++ ++ GL + G + EA + + +++
Sbjct: 635 HCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLF-ENGMVVEADQVIQQLLN 688
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ CK +V+ A D K P V TYS+L+ GL
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 60 LSEARKLF-----DEMLERKCPVDILAHN----------SLLEAMCKAGNIDEAHGMLRE 104
EA++L ++ + D L H +LL+ C G ++EA + +
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 615
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M D YS+ IH C A ++ M + PN + +IR L +N
Sbjct: 616 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGM 675
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
V EA Q++ +++ + D + A++ + + V+ L ++ M K+ ++P
Sbjct: 676 VVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 160/322 (49%), Gaps = 40/322 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++PSI + L+ L ++ + A Q + A++ P + TY++++ GL +G +S+A
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D+ + + CP DI +N+L++ CK +D A M+ M S G PD +Y+ ++
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A V + +M+ PN+ TYN I+ LCK +KV EA LL EM +G PD
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Query: 184 EWS------------------------------------YNAILAYHCDRAEVNMALRLI 207
S YN I++ ++ +NMA++L
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE-VWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M PD +TY +V+ ++G + + + E+MEKR F PS++T+ +++ LC
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR-FIPSLTTFGRVLNCLCV 658
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
K K+ EA +M+ +GI P
Sbjct: 659 KD-KVHEAVGIIHLMLQKGIVP 679
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 170/357 (47%), Gaps = 46/357 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS----- 61
P + ++L+H LCK+ V + + K P + T++I V+GL G L
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273
Query: 62 ----EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
EA + +M+ D L +NS+++ CK G + +A+ +L++ G +PD F+Y
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Query: 118 SIFIHAFCEAND-----------------------------------IHSVFRVLDSMKR 142
I+ FC+ D I ++++ M
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+PN++TYN +I LCK V +A L+D+ I +G PD ++YN ++ +C + +++
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDS 453
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A ++ RM + + PD TYN +L L + G+ + E++++ME++G P++ TY+++V
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
LCK K K+ EA M +G+ P + L +G +D L +ME+
Sbjct: 514 SLCKAK-KVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 148/302 (49%), Gaps = 3/302 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + L++ CK A F D P++ Y+ L++GL G + A
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM E C +I +N ++ +CK G + +A ++ + + G PD F+Y+ I
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + S +++ M + P+V TYN ++ LCK K EE ++ M E+G P+
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN I+ C +VN A+ L+ M + + PD ++ + ++G D A +++
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564
Query: 244 SMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
MEK+ + +TY+++V ++ + A K F +M + G P + T ++ +
Sbjct: 565 RMEKQYDVCHTTATYNIIVSAFSEQL-NMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623
Query: 303 LG 304
+G
Sbjct: 624 MG 625
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 48/307 (15%)
Query: 29 AHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLER------------- 73
A + F++AK E F T TY +V+ LG GE E KL EM E
Sbjct: 23 ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEA 82
Query: 74 -----------------------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
C + +HN+++ + + G ++AH + MR G
Sbjct: 83 MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ D ++Y+I I +FC+ ++ R+L +M N Y ++ L + + + A +
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L DEM+ R PD ++N ++ C + V + RL+ ++ K V P+ T+N+ ++ L
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262
Query: 231 RVGRFDRAT---------EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
R G DRA E M GF P TY+ ++ G C KKG +++A + +
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYC-KKGMVQDANRVLKDA 321
Query: 282 VDEGIPP 288
V +G P
Sbjct: 322 VFKGFKP 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 138/301 (45%), Gaps = 42/301 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I+ + L+ CK+ + A + + TP V TY+ L+ GL G+ E
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS------- 116
++F M E+ C +I+ +N +++++CKA ++EA +L EM+S G +PD S
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549
Query: 117 -----------------------------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
Y+I + AF E +++ ++ MK P
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ +TY +I CK + + Y+ L E +E+ P ++ +L C + +V+ A+ +I
Sbjct: 610 DNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGII 669
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M ++ ++P+ T N + + +V + + E + K+G + + TY ++ G+ K
Sbjct: 670 HLMLQKGIVPE--TVNTIFEADKKVVAAPKI--LVEDLLKKG-HIAYYTYELLYDGIRDK 724
Query: 268 K 268
K
Sbjct: 725 K 725
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 154/306 (50%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G++P + + + LCK V A +F P V TY+IL+R L + G+
Sbjct: 141 MLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGK 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E K E+ R C +++ ++ L+ ++C+ G I+E+ +++ M+ G PDA+ Y
Sbjct: 201 WDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDP 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC + LD M +P++ YN I+ LCKN + A ++ ++ E G
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVG 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN +L+ + AL +I++M + + PD TYN ++ L R G D A
Sbjct: 321 CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAI 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M F P++ +Y ++ GLCK ++++A + M++ G P +T +L
Sbjct: 381 GLLADMLSGRFQPNIVSYKTVLLGLCKAH-RIDDAIEVLAAMIENGCQPNETTYTLL--- 436
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 437 IEGIGF 442
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP ++ + ++ CK ++ A D K + F+P V T++I++ G++ A K
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100
Query: 66 LFDEML-ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F+E+L + C ++ + L+EA G IDEA +L EM S G EPD F+Y++
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + F + ++ P+V TYN ++R L K +E + + E+ RG P+
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ +++ C ++ ++ L+ M ++ + PD + Y+ ++ R G+ D A E +
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M GF P + Y+ ++ LC K G + A + F + + G PP S+ + + L G
Sbjct: 281 MICDGFLPDIVNYNTIMAALC-KNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 3/251 (1%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
++ P V + L++G + + +A ++ +LE+ D+ A+N+++ CKA I+ A
Sbjct: 5 DYQPDVILCTKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESA 63
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS-MKRYNLVPNVFTYNCIIR 157
+L M+ G PD +++I I FC I +V + +K N P + TY +I
Sbjct: 64 KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
++EA +LLDEM+ RG PD ++YN I C +V+ A + + P
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP 183
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D TYN++L+ L+ G++D + + RG P+V TYS+++ LC + GK+EE+
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLC-RDGKIEESVNL 242
Query: 278 FEMMVDEGIPP 288
++M ++G+ P
Sbjct: 243 VKVMKEKGLTP 253
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV +P + +L+ +++ A + + P V Y+ ++ G +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE-MRSIGAEPDAFSYSI 119
A+ + D M + D++ HN ++ C G ID A + E ++ +P +Y+I
Sbjct: 61 ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ I ++LD M L P+ FTYN I R LCK KV+ A++ + + RG
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +L ++ + + + ++ + P+ TY++++ L R G+ + +
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M+++G P Y ++ C ++GKL+ A ++ + M+ +G P
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFC-REGKLDMAIEFLDCMICDGFLP 288
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P++ L+ +LC+ ++ + K + TP Y L+ G+L A
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ D M+ DI+ +N+++ A+CK GN D A + ++ +G P+ SY+ + A
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ D + ++ M + P+V TYN +I LC++ V+EA LL +M+ P+
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPN 394
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY +L C ++ A+ ++ M + P+ TY ++++ + G +A E+
Sbjct: 395 IVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELAN 454
Query: 244 SM 245
S+
Sbjct: 455 SL 456
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 155/295 (52%), Gaps = 6/295 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P I+ L+ CK K A + F+ F P V TYS L+ GL G
Sbjct: 80 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR 139
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L EA LF M++ C + + +NSL+ C+ G +DEA +L M G+ PD +Y+
Sbjct: 140 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 199
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++ FC+ + + +L+ M R L PNV T+ ++ LC+ ++ +A +L EM +
Sbjct: 200 TLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRK 259
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P ++YN IL +C ++ A + + + + + P+ ++N++++ L +V R A
Sbjct: 260 SCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 317
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE-GIPPYSST 292
E+ E +R P V Y+ ++ LC++K K++EAC+ + M++E G P S T
Sbjct: 318 MELVEEARRRRCNPDVVMYTTVIDVLCREK-KVDEACRVYRKMLEEPGCLPNSIT 371
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 4/251 (1%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
E PT TY+ L+ GL SEA L +EM+ C DI + +L+ CK+ D+A
Sbjct: 49 EEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA 108
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIR 157
+ ++ + G PD +YS I C+ + + M K + +PN TYN +I
Sbjct: 109 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 168
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
C+ K++EA LL+ M E G++PD +Y ++ C A ++ A L+ +MT++ + P
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+ T+ ++ L R R A + M ++ P+V TY+ ++ G C+ +LEEA K+
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVN-QLEEARKF 287
Query: 278 FEMMVDEGIPP 288
M+ + PP
Sbjct: 288 --MLEEMDCPP 296
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P A +Y+ I C+A + +L+ M +P++FTY +I CK++K ++A ++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLV 230
++++ RG PD +Y+ ++ C + A+ L RM K + MP+ TYN ++
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
R+G+ D A + E M + G P V TY+ +++G C K +L++A M +G+ P
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC-KLARLDDAYDLLNQMTRKGLTPNV 230
Query: 291 STVEMLRNRLVGLGFL-DIIEILADKMERSTSCTIQELANAMRG 333
T L + L L D + IL + +S S T+ + G
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP TYN +I LCK E+ EAY LL+EM+ G PD ++Y ++ C + + ALR
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGL 264
+ ++ PD TY+ ++ L + GR A +++ M K G P+ TY+ ++ G
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
C + GK++EA E M + G P T L N L LD L ++M R
Sbjct: 171 C-RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 223
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 174/339 (51%), Gaps = 12/339 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G ++Y+ + LL LC+ K + ++ P V +Y+ ++RG + E
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +L +EM C ++ L++A CKAG +DEA G L+EM+ +G E D Y+
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ ++ + D + P TYN +IR CK +++EA ++ + MIERG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y ++ C + AL+ + M +++ P+ TYN+++ L + G A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV------DEGIPPYSSTV 293
E+ E M+KR P TY++++ GLC KG L+EA K +M+ D + Y++ +
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 294 EML--RNRLVGLGFLDIIEILADKMERSTSCTIQELANA 330
L NRL LDI ++L +K+ T L N+
Sbjct: 432 HGLCKENRLHQA--LDIYDLLVEKLGAGDRVTTNILLNS 468
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 164/371 (44%), Gaps = 46/371 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G++P++Y L+ LC K A Q + + + P TY+I++ L G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSY 117
+++A ++ + M +R+ D + +N LL +C G++DEA +L M S +PD SY
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 118 SIFIHAFCEANDIHSVFRVLD-----------------------------------SMKR 142
+ IH C+ N +H + D +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+V N TY +I CK + A LL +M P + YN +L+ C ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A RL M ++N PD ++N+++ ++ G A + M + G P + TYS +++
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADK--- 315
K G L+EA +F+ MVD G P + + + + G D +++ L DK
Sbjct: 608 RFLKL-GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Query: 316 MERSTSCTIQE 326
+++ +CT+ +
Sbjct: 667 LDKELTCTVMD 677
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 39/354 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
++E G P + L+ CK +K A + F+ + P V TY+ L+ GL VG+
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + + M+E+ + + +N ++ +CK G + +A ++ M+ PD +Y+I
Sbjct: 333 TKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV--PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ C D+ ++L M + + P+V +YN +I LCK ++ +A + D ++E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 178 RGANPDE----------------------W-------------SYNAILAYHCDRAEVNM 202
+ D W +Y A++ C +N+
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L+ +M + P YN +L L + G D+A ++E M++ +P V ++++M+
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G K G ++ A M G+ P T L NR + LG+LD DKM
Sbjct: 573 G-SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + +MLE ++ ++ + LLE + A G+L M G + ++++I +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + +L M+R +L+P+VF+YN +IR C+ +++E+A +L +EM G +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ C +++ A+ + M + D Y +++ G DR ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ + +RG P TY+ ++ G C K G+L+EA + FE M++ G+ P T L + L G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFC-KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 303 LG 304
+G
Sbjct: 330 VG 331
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ CK + VA + E P+V Y+ L+ L G L +A +LF+EM
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D+++ N +++ KAG+I A +L M G PD F+YS I+ F + +
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
D M P+ + +++ + ++ +L+ +++++ D+ ++ Y
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 195 CD-RAEVNMALRLITRMTKE 213
C+ A +++A RL+ R+T +
Sbjct: 680 CNSSANMDLAKRLL-RVTDD 698
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 180/342 (52%), Gaps = 5/342 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+P++ + ++ LCK K V A+ + +A+ F P V TYS L+ G G+L EA
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PNVITYSTLIYGFCLAGQLMEAF 205
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EM+ + ++ + L++A+CK G + EA +L M G +P+ SY+ + +
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ + ++ +M + + PNV++YN +I +LCK+++V+EA LL E++ + P+
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y++++ C + AL L+ M D TY +L L + D+AT ++
Sbjct: 326 VTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M++RG P+ TY+ ++ GLC K G+ + A K F+ ++ +G T ++ + L G
Sbjct: 386 MKERGIQPNKYTYTALIDGLC-KGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEG 444
Query: 305 FLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
LD + KME + C + + ++ F K ++++ E
Sbjct: 445 MLDEALAMKSKMEEN-GCIPDAVTFEIIIRSLFEKDQNDKAE 485
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L+ L+ LC + VK + F D + F +Y+ L+ GL +GE
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGE 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL + +R +++ +N++++ +CK ++EA+ + EM + G P+ +YS
Sbjct: 131 TRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYST 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC A + F +L+ M N+ PNV+TY ++ LCK KV+EA LL M + G
Sbjct: 191 LIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN ++ +C EV A ++ M ++ V P+ ++YN+++ L + R D A
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAM 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+ + + P+ TYS ++ G C K G++ A + M G P Y+S ++
Sbjct: 311 NLLREVLHKNMVPNTVTYSSLIDGFC-KLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369
Query: 296 L 296
L
Sbjct: 370 L 370
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 152/294 (51%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I + ++++ +L K KH A F + + P + T +IL+ +G+++ + +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ + + N+L++ +C G + ++ ++ + G + D SY+ ++ C+
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ S ++L ++ + PNV YN II LCK++ V EAY L EM RG P+ +
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C ++ A L+ M +N+ P+ +TY +++ L + G+ A + M
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
K G P+V +Y+ ++ G C G+++ A + F MV +G+ P + ++ +RL
Sbjct: 248 KEGVKPNVVSYNTLMDGYC-LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP++ + L+ C V+ A Q F + P V +Y+I++ L
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L E+L + + + ++SL++ CK G I A +L+EM G D +Y+
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ ++ + MK + PN +TY +I LCK + + A +L ++ +G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ W+YN +++ C ++ AL + ++M + +PD T+ ++++ L + D+A
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAE 485
Query: 240 EVWESM 245
++ M
Sbjct: 486 KLLHEM 491
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++Y + ++ LCK K V A H+ P TYS L+ G +G
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A L EM R P D++ + SLL+A+CK N+D+A + +M+ G +P+ ++Y+
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTA 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + ++ + NV+TYN +I LCK ++EA + +M E G
Sbjct: 401 LIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PD ++ I+ ++ + + A +L+ M ++++
Sbjct: 461 CIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 37/254 (14%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
+L R P I+ N ++ ++ K + A + ++M+ G EPD F+ +I I+ FC
Sbjct: 2 LLVRDTP-PIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ F VL + + PN T N +++ LC +V+++ D+++ +G D+ SY
Sbjct: 61 MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+L C E AL+L+ + + P+ YN ++ L + + A +++ M+ RG
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 250 FYPSVSTYS-----------------------------------VMVHGLCKKKGKLEEA 274
+P+V TYS +++ LC K+GK++EA
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALC-KEGKVKEA 239
Query: 275 CKYFEMMVDEGIPP 288
+M EG+ P
Sbjct: 240 KNLLAVMTKEGVKP 253
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 146/288 (50%), Gaps = 5/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDV 57
M + G ++Y+L+ +L C+ A F K + P TY+ LV G
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162
Query: 58 GELSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
L+EAR LF+ M + C +++ ++ L++ CK+G + E G+L EM G + D F
Sbjct: 163 KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFV 222
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS I AFC DI + + D M R + PNV TY+C+++ L + + EA ++L +M
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT 282
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG PD +Y + C A++++ M ++ P TYN+V+ L + R D
Sbjct: 283 ARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMD 342
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
A V E M K+G P TY+ ++ GLC GK+ EA +++++ E
Sbjct: 343 DAFGVVEMMVKKGKKPDAVTYNTLLKGLC-GAGKIHEAMDLWKLLLSE 389
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 144/308 (46%), Gaps = 5/308 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV + P L L + H A K F V +++++G G+
Sbjct: 68 MVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQ 127
Query: 60 LSEARKLFDEMLER-KCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFS 116
+A LF +M C V D + +N+L+ CKA + EA + M+ G P+ +
Sbjct: 128 CDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVT 187
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS+ I +C++ ++ +L+ M+R L +VF Y+ +I C +E +L DEM+
Sbjct: 188 YSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEML 247
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
R +P+ +Y+ ++ A ++ MT V PD Y ++ L + GR
Sbjct: 248 RRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAG 307
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A +V + M ++G P TY+V+V+GLCK+ ++++A EMMV +G P + T L
Sbjct: 308 DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED-RMDDAFGVVEMMVKKGKKPDAVTYNTL 366
Query: 297 RNRLVGLG 304
L G G
Sbjct: 367 LKGLCGAG 374
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 147/299 (49%), Gaps = 8/299 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + S L + S A + M +R V++ N +L+ C++G D+A +
Sbjct: 75 PRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSL 134
Query: 102 LREMRSI--GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRK 158
+M+ PD +Y+ ++ FC+A + + ++MK+ + PN+ TY+ +I
Sbjct: 135 FSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDC 194
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
CK+ +V E LL+EM G D + Y+++++ C ++ L M + V P+
Sbjct: 195 YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPN 254
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
TY+ +++ L R GR+ A+E+ + M RG P V Y+V+ GLC K G+ +A K
Sbjct: 255 VVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLC-KNGRAGDAIKVL 313
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADKMERSTSCTIQELANAMRG 333
++MV +G P + T ++ N L +D ++E++ K ++ + T L + G
Sbjct: 314 DLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCG 372
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 165/385 (42%), Gaps = 74/385 (19%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+K ++ L+ A C ++ + FD + + +P V TYS L++GLG G EA
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGN----------------------------- 94
++ +M R D++A+ L + +CK G
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNG 334
Query: 95 ------IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH---SVFRVLDSMKRYNL 145
+D+A G++ M G +PDA +Y+ + C A IH ++++L S +++++
Sbjct: 335 LCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS-EKFHV 393
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+VFT N +I+ LCK +V +A ++ M+E G + +YN ++ + ++ AL+
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L + P+ TY++++ L ++ A ++ M+ G P+V Y+ ++ LC
Sbjct: 454 LWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLC 513
Query: 266 K----------------------------------KKGKLEEACKYFEMMVDEGIPPYSS 291
+ K G ++ A + M + P +
Sbjct: 514 REDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAV 573
Query: 292 TVEMLRNRLVGLGFLDIIEILADKM 316
T +L NR LG LD L +KM
Sbjct: 574 TFSILINRFSKLGMLDEAMGLYEKM 598
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 4/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
MV+ G KP + LL LC + A + + K P V T + L++GL
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKE 410
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + +A ++ M+E +I+ +N L+E A + EA + + G P++ +Y
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S+ I+ C+ + + MK + P V YN ++ LC+ + +E+A L EM
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
N D S+N I+ +V A L++ M +++PD T+++++ ++G D
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDE 590
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
A ++E M G P V + ++ G KG+ E+ M D+ +
Sbjct: 591 AMGLYEKMVSCGHVPGVVVFDSLLKGY-GLKGETEKIISLLHQMADKDV 638
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHA-LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G++ +I + L+ L RK ++ + + F+P TYS+++ GL +
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQM 482
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS AR LF +M + ++ +N+L+ ++C+ ++++A + +EMR++ D S++I
Sbjct: 483 LSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNI 542
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A D+ S +L M +LVP+ T++ +I + K ++EA L ++M+ G
Sbjct: 543 IIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCG 602
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
P ++++L + + E + L+ +M ++V+ D + +L L + R
Sbjct: 603 HVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGEL 60
VE G P+ +++ LCK + + VA F K PTV Y+ L+ L L
Sbjct: 459 VESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSL 518
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR LF EM VD+++ N +++ KAG++ A +L EM + PDA ++SI
Sbjct: 519 EQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSIL 578
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ F + + + + M VP V ++ +++ + E+ LL +M ++
Sbjct: 579 INRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDV 638
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
D + ILA C + +++ + ++++ + T +LL+R+ F
Sbjct: 639 VLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGTTIKCHELLMRLNNF 693
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 155/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G +P + ++ +LCK + V A F K + +P + TY+ L++GL +
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + +EM+ +I+ + L+ CK GN+ EA G+L+ M +G EP+ +YS
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + ++ ++ D M P+VF+YN +I CK +++ EA QL +EMI +G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ C + A L M +PD TY+++L + G +A
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +M+ P++ Y++++ +CK + L+EA K F + +G+ P + N
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSR-NLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 552 LCKEGLLD 559
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G++ +I + L++ LCK A + FD+ + P V TY+ ++ GL +GE
Sbjct: 183 IIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGE 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A LF +M E C D++ ++++++++CK ++EA + M++ G P+ F+Y+
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + +L+ M N++PN+ T++ +I CK V EA +L M E G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y++++ + +AEV A +L M + PD +YN+++ + R A
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G P + +Y+ ++ GLC + G+L EA F+ M+ G P T +L +
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLC-QLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481
Query: 300 LVGLGFL 306
G+L
Sbjct: 482 FCKQGYL 488
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 136/257 (52%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P++ L++ + V A + FD P V +Y+IL+ G
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++LF+EM+ + DI+++N+L++ +C+ G + EAH + + M + G PD +YSI
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + FR+ +M+ L PN+ YN +I +CK+ ++EA +L E+ +G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y I+ C ++ AL M ++ P+ +YN++++ ++ RA
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597
Query: 240 EVWESMEKRGFYPSVST 256
++ M ++GF V+T
Sbjct: 598 QLIGEMREKGFVADVAT 614
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P+I L++ CK +V A + P V TYS L+ G E
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD M+ + C D+ ++N L+ CKA I EA + EM G PD SY+
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + +M +P++ TY+ ++ CK + +A++L M
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN ++ C + A +L + + + + P+ Y ++ L + G D A
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E + +ME+ G P+ +Y+V++ G + K
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHK 591
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 147/297 (49%), Gaps = 9/297 (3%)
Query: 7 KPSIYDLDQLLHALCKRKH-----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
+P I ++LL A+ K +H + ++ Q +P T +L+ + +
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQM---ELAGLSPDTYTLHMLINCFFQLQRVD 174
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ ++++ + I+ N+L+ +CK G +A + +M + G +PD +Y+ I
Sbjct: 175 LGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTII 234
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ + + + M P+V TY+ II LCK+ +V EA + M +G +
Sbjct: 235 NGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS 294
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ ++YN+++ C+ + A ++ M N+MP+ T+++++ + + G A V
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++M + G P+V TYS +++G + ++ EA K F++M+ +G P + +L N
Sbjct: 355 LKTMTEMGVEPNVVTYSSLMNGY-SLQAEVVEARKLFDVMITKGCKPDVFSYNILIN 410
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 148/304 (48%), Gaps = 3/304 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+ IY L+ C + A F K P V T++ L+ GL +SEA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF +M E C +++ +L+ +C+ G I EA +L M G +P +Y +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 125 CEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D S +L M+ + ++PNV Y+ II LCK+ + +A L EM E+G PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + A +L+ M + + PD TYN ++ V+ G+F A E+++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG P+ TYS M+ G CK+ +L+ A F +M +G P T L + G
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQN-RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 304 GFLD 307
+D
Sbjct: 409 KRID 412
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M+E G++P+ ++ +CK+ A + P V YS ++ L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A+ LF EM E+ D+ +NS++ C +G +A +L+EM PD +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TY+ +I CK +++ A + M +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++N ++ +C ++ + L+ MT+ ++ D TYN ++ VG + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T ++ GLC GKL++A + F++M
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALEMFKVM 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-----VKTYSILVRGLG 55
M G P++ + L+ C K + + HE T T TY+ L+ G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL----HEMTETGLVADTTTYNTLIHGFY 441
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI------- 108
VG+L+ A L EM+ DI+ ++LL+ +C G + +A M + M+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 109 ----GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G EPD +Y+I I + + M +VP+ TY+ +I LCK +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA Q+ D M + +P+ ++ ++ +C V+ L L M + ++ + TY
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
M+ G+ P I D LL LC +K A + F +A H F P V+TY+
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ EA +L++EM R D + ++S+++ +CK +DEA M M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ +++ I+ +C+A + + M R +V N TY +I K + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+ EMI G PD + +L + E+ A+ ++ ++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G ++ L +A LF +ML + ++ L+ + + D + ++M
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D +S++I I FC + + + + L P+V T+N ++ LC ++V EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 170 Q-----------------------------------LLDEMIERGANPDEWSYNAILAYH 194
LLD M+E G P + +Y I+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 195 CDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + + AL L+ +M + +++P+ Y+ ++ L + GR A ++ M+++G +P
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
+ TY+ M+ G C G+ +A + + M++ I P T L N V G E L
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 314 DKM 316
D+M
Sbjct: 349 DEM 351
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 6/300 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP---TVKTYSILVRGLGDV 57
M E G P +L ++C + A A + V YS +V GL
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKE 224
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ EA LF EM ++ P +++ +NS++ A+CKA +D+A G+LR+M G +PD +Y
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTY 284
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IH + R+ M ++PN T + + LCK+ ++EEA + D M+
Sbjct: 285 NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344
Query: 178 RGANPDEWSYNAIL-AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G + SY+ +L Y V+M+ L M ++ ++P++H +N+++ + G
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMS-NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++E M+KRG P V TY ++H C + G +++A F M+D+G+ P + + L
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFC-RMGSMDDAMDKFNHMIDKGVEPNFAVYQCL 462
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 141/295 (47%), Gaps = 5/295 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK- 65
P++Y L+ C+ + + +A FF + V S L+RGL D EA
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR-EMRSIGAEP-DAFSYSIFIHA 123
LF M E C D ++++++L+++C G A +LR ++ G P + YS +H
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + M + + PNV TYN +I LCK V++A +L +M+ G PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ + + A+R+ MT V+P+ T + + L + GR + A E ++
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
SM +G ++ +YS ++HG G L + F +MV +GI P +L N
Sbjct: 341 SMLAKGHKLNIISYSTLLHGY-ATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + ++HALCK + V A + P TY+ L+ G +G+
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A ++F EM R + + ++ + +CK G I+EA M + G + + SYS
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + A + + + + M R +VPN +N ++ K V EA + ++M +RG
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y A++ C ++ A+ M + V P+ Y +++ G +A
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E+ + +G P + +++ +++ LC K+G++ EA + F+M++ G
Sbjct: 477 ELVYEIRNKGLGPCILSFASLINHLC-KEGRVFEAQRIFDMIIRTG 521
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 6/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDV 57
M G+ P+ + LCK ++ A +FFD+ H+ + +YS L+ G
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLN--IISYSTLLHGYATA 364
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G L + LF+ M+ + N L+ K G + EA + +M+ G PD +Y
Sbjct: 365 GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTY 424
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
IHAFC + + M + PN Y C+I+ C + + +A +L+ E+
Sbjct: 425 LAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRN 484
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G P S+ +++ + C V A R+ + + D + + ++ +G+
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSE 544
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A V ++M G P + TY +V+G C K G++++ F ++ +G+ P + T ++
Sbjct: 545 AFRVHDAMVSVGIEPDIVTYGTLVNGCC-KNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603
Query: 298 NRLVGLG 304
+ L G
Sbjct: 604 DGLFHAG 610
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 2/280 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P+ + + L++ K V+ A F D K P V TY ++ +G
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F+ M+++ + + L++ C G++ +A ++ E+R+ G P S++
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + R+ D + R +V + +I C K+ EA+++ D M+ G
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ C ++ L L + + V P TY ++L L GR A
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
E+++ M + G ++ TYS+++ GLC+ EEA F+
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCT-EEAITVFQ 655
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 2/302 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P+ L+ C VK ++ P + +++ L+ L G
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+++FD ++ D+ SL++ C G + EA + M S+G EPD +Y
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ I + + + P FTY I+ L + A ++ EMIE G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y+ +L C A+ + ++ NV D N+++ + + R + A
Sbjct: 627 IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ S+ G P+V TY++M+ L K+G +EEA F +M+ G+ P S + ++
Sbjct: 687 GLFASIPDYGLVPTVQTYTIMMENLI-KEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRT 745
Query: 300 LV 301
L+
Sbjct: 746 LL 747
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI+P I L++ CK + F H+ PT TY I++ GL G
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+++F EM+E V I ++ LL +C+ +EA + +++ ++ + D +I
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A + S+ Y LVP V TY ++ L K VEEA + M++ G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+P N I+ ++ E+ A + R+ ++++ + T +M+L L G+
Sbjct: 732 LSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGK 786
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
A P ++YSI I C A + F + R + +V + ++R LC ++ +EA
Sbjct: 99 ALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAV 158
Query: 170 QLL-DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTY 222
+L M E G PD SY+ +L CD AL ++ K+ NV+ Y
Sbjct: 159 DVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVV----VY 214
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+ V+ L + G+ A +++ M ++G P+V TY+ ++H LCK + +++A MV
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA-VDKAQGILRQMV 273
Query: 283 DEGIPPYSSTVEMLRNRLVGLG 304
G+ P + T L + LG
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLG 295
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 110/305 (36%), Gaps = 37/305 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------FT--------------- 41
G+ P I L++ LCK V A + FD FT
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEA 545
Query: 42 -------------PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEA 88
P + TY LV G G + + LF E+L + + +L+
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+ AG A M +EM G +YSI + C N V + N+ +
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ N +I K+ K + EEA L + + G P +Y ++ V A + +
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFS 725
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M K + P H N++++ L+ G +A ++ + ST S M+ L K
Sbjct: 726 VMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTAS-MLLSLFSCK 784
Query: 269 GKLEE 273
GK E
Sbjct: 785 GKHRE 789
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 157/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G + ++ L+H+LCK + V A F K + +PT+ TY+ L++GL +
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L +EM +++ N L++ CK G + A G+L+ M +G EPD +Y+
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + ++ ++ D M P+VF+Y+ +I CK ++++EA QL +EMI +G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P+ SYN ++ C + A L M +P+ +TY ++L + G +A
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +M+ P++ Y+++V+ +C K G L++A + F + G+ P + N
Sbjct: 346 RLFRAMQSTYLKPNLVMYNILVNAMC-KSGNLKDARELFSELFVIGLQPNVQIYTTIING 404
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 405 LCKEGLLD 412
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 160/338 (47%), Gaps = 37/338 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+ L++ C+ + V + K PT+ T++ L+ GLG VG+ ++A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFD+M+ R C D + +++ +CK G A G+ ++M G + + +YS IH+
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 124 FC------EANDIHSVFR-----------------------------VLDSMKRYNLVPN 148
C EA DI S + +L+ M N++PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
V T+N ++ CK KV A +L M E G PD +YN+++ + EV A +L
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD +Y++++ + R D A +++ M +G P+ +Y+ ++HGLC +
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC-QL 303
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
G+L EA F+ M G P T +L + G+L
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYL 341
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P + + L++ V A + FD P V +YSIL+ G
Sbjct: 211 MTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKR 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++LF+EM+ + + +++N+L+ +C+ G + EA + + M + G P+ ++Y+I
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + FR+ +M+ L PN+ YN ++ +CK+ +++A +L E+ G
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y I+ C ++ AL M + PD +YN++++ ++ RA
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAV 450
Query: 240 EVWESMEKRGFYPSVST 256
+ M RGF T
Sbjct: 451 HLIGEMRDRGFITDAGT 467
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M I P++ + L+ CK V A + P V TY+ L+ G E
Sbjct: 176 MTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD M+ + C D+ +++ L+ CKA IDEA + EM G+ P+ SY+
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + + +M +PN++TY ++ CK + +A++L M
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN ++ C + A L + + + P+ Y ++ L + G D A
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E + +ME G P +Y+V++ G + K
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGFLQHK 444
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M G P+ + +I I+ FC+ + F VL + L P + T+ +I L K K
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+A +L D+M+ RG PD+++Y I+ C E +A L +M + + TY+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ L + R + A +++ M+ + P++ TY+ ++ GLC + +EA M
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFS-RWKEASALLNEMTSL 179
Query: 285 GIPPYSSTVEML 296
I P T +L
Sbjct: 180 NIMPNVVTFNVL 191
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 148/304 (48%), Gaps = 3/304 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+ IY L+ C + A F K P V T++ L+ GL +SEA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF +M E C +++ +L+ +C+ G I EA +L M G +P +Y +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 125 CEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D S +L M+ + ++PNV Y+ II LCK+ + +A L EM E+G PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + A +L+ M + + PD TYN ++ V+ G+F A E+++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG P+ TYS M+ G CK+ +L+ A F +M +G P T L + G
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQN-RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 304 GFLD 307
+D
Sbjct: 409 KRID 412
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M+E G++P+ ++ +CK+ A + P V YS ++ L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A+ LF EM E+ D+ +NS++ C +G +A +L+EM PD +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TY+ +I CK +++ A + M +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++N ++ +C ++ + L+ MT+ ++ D TYN ++ VG + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T ++ GLC GKL++A + F++M
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALEMFKVM 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-----VKTYSILVRGLG 55
M G P++ + L+ C K + + HE T T TY+ L+ G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL----HEMTETGLVADTTTYNTLIHGFY 441
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI------- 108
VG+L+ A L EM+ DI+ ++LL+ +C G + +A M + M+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 109 ----GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G EPD +Y+I I + + M +VP+ TY+ +I LCK +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA Q+ D M + +P+ ++ ++ +C V+ L L M + ++ + TY
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
M+ G+ P I D LL LC +K A + F +A H F P V+TY+
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ EA +L++EM R D + ++S+++ +CK +DEA M M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ +++ I+ +C+A + + M R +V N TY +I K + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+ EMI G PD + +L + E+ A+ ++ ++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G ++ L +A LF +ML + ++ L+ + + D + ++M
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D +S++I I FC + + + + L P+V T+N ++ LC ++V EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 170 Q-----------------------------------LLDEMIERGANPDEWSYNAILAYH 194
LLD M+E G P + +Y I+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 195 CDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + + AL L+ +M + +++P+ Y+ ++ L + GR A ++ M+++G +P
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
+ TY+ M+ G C G+ +A + + M++ I P T L N V G E L
Sbjct: 290 LFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 314 DKM 316
D+M
Sbjct: 349 DEM 351
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 149/289 (51%), Gaps = 4/289 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDVGE 59
E G P ++ + LL +LC + A T P V Y+ ++ G G+
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM++R P D++ ++S++ A+CKA +D+A LR+M + G PD ++Y+
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + RV M+R +++P+V N ++ LCK K++EA + D M +G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +SY +L + + + L M + + P T+N+++K G D+A
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P V TY ++ LC + GK+++A + F M+D+G+ P
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALC-RIGKMDDAMEKFNQMIDQGVVP 464
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 37/343 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI P + ++HALCK + + A F ++ P TY+ L+ G G+
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA ++F EM + D++A N+L+ ++CK G I EA + M G PD FSY+I
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 120 -----------------------------------FIHAFCEANDIHSVFRVLDSMKRYN 144
I A+ + + + M+ +
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+V TY +I LC+ K+++A + ++MI++G PD+++Y+ ++ C + A
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LI+ + + D + ++ L ++GR A +++ G +P Y++++ G
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C GK+E+A + F+ MV GI P L N +G +D
Sbjct: 547 C-LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+ L+ +LCK +K A FD A P V +Y+I++ G G L +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LFD ML I N L++A G +D+A + EMR G +P +Y I A
Sbjct: 382 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + M +VP+ + Y+C+I+ C + + +A +L+ E++ G D
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ +I+ C V A + + PD YNM++ VG+ ++A V+++
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M G P+V Y +V+G C K G+++E F M+ +GI P +
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYC-KIGRIDEGLSLFREMLQKGIKPST 606
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P I + L+ A + A F+ + H P V TY ++ L +G+
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M+++ D A++ L++ C G++ +A ++ E+ + G D +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + D L P+ YN ++ C K+E+A ++ D M+ G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ +C ++ L L M ++ + P YN+++ L GR A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ M + G + TYS+++ GL K +
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNR 655
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 2/278 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V G+ P + L+ C ++ A + FD P V Y LV G +G +
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF EML++ + +N +++ + +AG A EM G + +YSI
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + ++ N+ ++ T N +I + + +VEEA L + G
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +Y+ ++ V A + + M PD N V++ L++ RA
Sbjct: 708 VPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+++R F T ++V L KG E ++
Sbjct: 768 YLSKIDERNFSLEHLTAMLLVD-LFSSKGTCREQIRFL 804
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA L DE+ R PV N L A+ +A + + G+ P A + ++F
Sbjct: 49 EAHDLLDELQRRGTPVLDRDLNGFLAALARAPS----------SAACGSGP-ALAVALFN 97
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A A RVL P +TY ++ + + E A +++ G
Sbjct: 98 RAASRAQGP----RVLS--------PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLR 145
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATE 240
D + +L C+ + AL ++ T E +PD +YN++LK L G+ +A +
Sbjct: 146 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205
Query: 241 VWESMEKRGFY--PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ M + G P V Y+ ++ G K+ G + +AC F+ MV GIPP YSS V
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKE-GDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264
Query: 295 ML 296
L
Sbjct: 265 AL 266
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI+P L++ LC +K A + F+ A + P T++ILV L G
Sbjct: 147 MFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGM 206
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR +F+ M E+ +I +N+L+ C +++A + M G P SYSI
Sbjct: 207 VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSI 266
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C++ I +L M L+PN TYN +++ LC + EA +L +M G
Sbjct: 267 LINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSG 326
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ +L C + AL+L+T M + + PD YN++++ + G+ + A
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E++ + G PSV TY++M+ GL K+G +EA K F M D+G P S + ++
Sbjct: 387 ELFSKLFANGIRPSVRTYNIMIKGLL-KEGLSDEAYKLFRKMEDDGFLPDSCSYNVI 442
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 144/290 (49%), Gaps = 2/290 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P+ L+ LCK+ V A F+ + P + TY+ L+ G E+++A K+
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ M+ + C + +++ L+ CK+ IDEA +L +M P+ +Y+ + C
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A+ + + M ++PN+ TY+ ++ LCK+ +EEA +LL M ER PD
Sbjct: 309 ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ ++ +A L +++ + P TYN+++K L++ G D A +++ ME
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKME 428
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
GF P +Y+V++ G + + A + + MV SST +ML
Sbjct: 429 DDGFLPDSCSYNVIIQGFLQNQDP-STAIQLIDEMVGRRFSADSSTFKML 477
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 147/294 (50%), Gaps = 12/294 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQ--FFDNAKHEFTPTVKTYSILVRGL 54
M+ +PS +L + L ++ K+K V + +Q F A +++T +IL+ L
Sbjct: 77 MIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT-----LNILINSL 131
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
+ + A + +M + D + +L+ +C G I EA + EM A P+
Sbjct: 132 CRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNT 191
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+++I + C+ + V ++M + PN++TYN ++ C ++ +A ++ +
Sbjct: 192 VTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEI 251
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+ +G P SY+ ++ +C ++ A L+T+M+++ ++P+ TYN +++ L
Sbjct: 252 MVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A E+++ M G P++ TYS+++ GLC K G LEEA K M + + P
Sbjct: 312 LLEAQELFKKMCSSGMLPNLRTYSILLDGLC-KHGHLEEALKLLTSMQERKLEP 364
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 134/262 (51%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P+IY + L++ C R + A + F+ P+V +YSIL+ G
Sbjct: 217 MTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRR 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ L +M E++ + + +N+L++ +C A ++ EA + ++M S G P+ +YSI
Sbjct: 277 IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSI 336
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + ++L SM+ L P++ YN +I+ + K+E A +L ++ G
Sbjct: 337 LLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANG 396
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ + A +L +M + +PD +YN++++ ++ A
Sbjct: 397 IRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAI 456
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++ + M R F ST+ +++
Sbjct: 457 QLIDEMVGRRFSADSSTFKMLL 478
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G PS++ L++ CK + + A ++ E P TY+ L++GL
Sbjct: 252 MVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA++LF +M ++ ++ LL+ +CK G+++EA +L M+ EPD Y+I
Sbjct: 312 LLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNI 371
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + + P+V TYN +I+ L K +EAY+L +M + G
Sbjct: 372 LIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDG 431
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
PD SYN I+ + + A++LI M D T+ M+L L
Sbjct: 432 FLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 118/245 (48%), Gaps = 2/245 (0%)
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
D+G + +A F M+ + L ++ K + +M G + +
Sbjct: 64 DIG-IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDY 122
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+ +I I++ C + IH VL M + + P+ T+ +I LC +++EA +L +EM
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
R A P+ ++ ++ C + V+ A + MT++ V P+ +TYN ++
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ A++V+E M +G PSV +YS++++G CK + +++EA M ++ + P + T
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSR-RIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 296 LRNRL 300
L L
Sbjct: 302 LMQGL 306
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 3/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P+ Y ++ CK V A + FD K E P Y+ L+ G D G+L
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A D M+ER + + +N L+ A+ G EA+ ++ EM G PD F+Y+I I+
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ + ++M R + V TY +I L K +V+E +L DE + RG P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ H ++ A ++ M K+ + PD TYN +++ L +GR D A ++
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M +RG P + TY+ ++ G KG +++A + M+++G P T L L
Sbjct: 785 DEMTERGIQPDLVTYNTLISGY-SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843
Query: 303 LGFLDIIEILADKM 316
G D E + +M
Sbjct: 844 NGQGDDAENMVKEM 857
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ ++ + L+HAL A++ + P V TY+IL+ G G
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 671
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ M R ++ + +L+ A+ K G + E + E G PD Y+
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ + +I F ++ M++ + P+ TYN ++R LC +V+EA +L+DEM ERG
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +++ + + +V ALR+ M + P TYN +++ L + G+ D A
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M + G P STY ++ GL
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGL 876
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A LF +M + P+ N +L +C AG A +LR+M P+A +Y+
Sbjct: 465 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 520
Query: 121 IHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + ++ M+ R + PN +TY +I CK +V+EA ++ DEM+ +G
Sbjct: 521 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 580
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ YNA++ +CD+ +++ AL RM + V TYN+++ L GR A
Sbjct: 581 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 640
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ E M +G P V TY+++++G C K+G +++A + FE M G+
Sbjct: 641 YELVEEMGGKGLAPDVFTYNILINGHC-KEGNVKKALEIFENMSRRGV 687
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H A F + M R L T+N ++R LC K A +LL +M
Sbjct: 455 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----P 510
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++A C R V AL ++ M + + P+++TY V+ +VGR D A
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570
Query: 240 EVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V++ M +G P Y+ ++ G C +GKL+ A Y + MV+ G+ +T +L +
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIGGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVH 629
Query: 299 RL 300
L
Sbjct: 630 AL 631
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGEL 60
V GI+P + + L+++ ++ A + K P TY+ L+RGL +G +
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EARKL DEM ER D++ +N+L+ G++ +A + EM + G P +Y+
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
I C+ ++ M + P+ TY +I L ++
Sbjct: 838 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N +L + C + AL L+ +M + N + TYN V+ GR A ++ M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 540
Query: 246 EKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGL 303
+RG P+ TY ++ G C K G+++EA K F+ M+ +G + P + L
Sbjct: 541 RERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599
Query: 304 GFLDIIEILADKM-ERSTSCTI 324
G LD + D+M ER + T+
Sbjct: 600 GKLDTALLYRDRMVERGVAMTV 621
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 3/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P+ Y ++ CK V A + FD K E P Y+ L+ G D G+L
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A D M+ER + + +N L+ A+ G EA+ ++ EM G PD F+Y+I I+
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ + ++M R + V TY +I L K +V+E +L DE + RG P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ H ++ A ++ M K+ + PD TYN +++ L +GR D A ++
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M +RG P + TY+ ++ G KG +++A + M+++G P T L L
Sbjct: 790 DEMTERGIQPDLVTYNTLISGY-SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848
Query: 303 LGFLDIIEILADKM 316
G D E + +M
Sbjct: 849 NGQGDDAENMVKEM 862
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ ++ + L+HAL A++ + P V TY+IL+ G G
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 676
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ M R ++ + +L+ A+ K G + E + E G PD Y+
Sbjct: 677 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 736
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ + +I F ++ M++ + P+ TYN ++R LC +V+EA +L+DEM ERG
Sbjct: 737 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +++ + + +V ALR+ M + P TYN +++ L + G+ D A
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 856
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M + G P STY ++ GL
Sbjct: 857 NMVKEMVENGITPDDSTYISLIEGL 881
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A LF +M + P+ N +L +C AG A +LR+M P+A +Y+
Sbjct: 470 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 525
Query: 121 IHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + ++ M+ R + PN +TY +I CK +V+EA ++ DEM+ +G
Sbjct: 526 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 585
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ YNA++ +CD+ +++ AL RM + V TYN+++ L GR A
Sbjct: 586 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 645
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ E M +G P V TY+++++G C K+G +++A + FE M G+
Sbjct: 646 YELVEEMGGKGLAPDVFTYNILINGHC-KEGNVKKALEIFENMSRRGV 692
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H A F + M R L T+N ++R LC K A +LL +M
Sbjct: 460 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----P 515
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++A C R V AL ++ M + + P+++TY V+ +VGR D A
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 240 EVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V++ M +G P Y+ ++ G C +GKL+ A Y + MV+ G+ +T +L +
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIGGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVH 634
Query: 299 RL 300
L
Sbjct: 635 AL 636
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N +L + C + AL L+ +M + N + TYN V+ GR A ++ M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 545
Query: 246 EKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGL 303
+RG P+ TY ++ G C K G+++EA K F+ M+ +G + P + L
Sbjct: 546 RERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604
Query: 304 GFLDIIEILADKM-ERSTSCTI 324
G LD + D+M ER + T+
Sbjct: 605 GKLDTALLYRDRMVERGVAMTV 626
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 3/299 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+ IY + L+ C + A F K P V T++ L+ GL +SEA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
F +M E C +++ +L+ +C+ G I EA +L M G +P +Y +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 125 CEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D S +L M+ + ++PNV Y+ II LCK+ + +A L EM E+G PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + A +L+ M + + PD TYN ++ V+ G+F A E+++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M RG P+ TYS M+ G CK+ +L+ A F +M +G P T L + G
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQN-RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M+E G++P+ ++ +CK+ A + P V YS ++ L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A+ LF EM E+ D+ +NS++ C +G +A +L+EM PD +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TY+ +I CK +++ A + M +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++N ++ +C ++ + L+ MT+ ++ D TYN ++ VG + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T ++ GLC GKL++A + F++M
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALEMFKVM 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-----VKTYSILVRGLG 55
M G P++ + L+ C K + + HE T T TY+ L+ G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL----HEMTETGLVADTTTYNTLIHGFY 441
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI------- 108
VG+L+ A L EM+ DI+ ++LL+ +C G + +A M + M+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 109 ----GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G EPD +Y+I I + + M +VP+ TY+ +I LCK +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA Q+ D M + +P+ ++ ++ +C V+ L L M + ++ + TY
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ +M ++ DI + N L++ C + A ++ +G PD +++ +H
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + M PNV T+ ++ LC+ ++ EA LLD M+E G P +
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y I+ C + + AL L+ +M + +++P+ Y+ ++ L + GR A ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+++G +P + TY+ M+ G C G+ +A + + M++ I P T L N V
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 304 GFLDIIEILADKM 316
G E L D+M
Sbjct: 339 GKFFEAEELYDEM 351
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
M+ G+ P I D LL LC +K A + F +A H F P V+TY+
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ EA +L++EM R D + ++S+++ +CK +DEA M M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ +++ I+ +C+A + + M R +V N TY +I K + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+ EMI G PD + +L + E+ A+ ++ ++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 159/300 (53%), Gaps = 2/300 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P++ + ++ LCK V A + D P V TY+ L+ G +G+ E
Sbjct: 214 VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVT 273
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M++R +++ +N L++A+CK G + +AH M M G PD +++ + +
Sbjct: 274 RLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY 333
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ND+ ++ D+ + P+V++YN +I CKN +++EA L ++M + P+
Sbjct: 334 CLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNI 393
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y++++ C ++ A L + + P+ TYN++L L ++ D+A E++
Sbjct: 394 VTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNL 453
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M +RG P+VS+Y+++++G CK K +++EA FE M + P S T L + L G
Sbjct: 454 MFERGLTPNVSSYNILINGYCKSK-RIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 163/331 (49%), Gaps = 3/331 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G + + L ++ LC V+ A +F D+ + F TY L+ GL +G EA
Sbjct: 143 GYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREA 202
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M + +++ +N +++ +CK G + EA + ++ G +PD F+Y+ IH
Sbjct: 203 FELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHG 262
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC V R+L M N+ NV+TYN +I LCK + +A+ + + MIERG PD
Sbjct: 263 FCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPD 322
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N +++ +C +V A +L + + PD +YN+++ + R D A ++
Sbjct: 323 LVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFN 382
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + P++ TYS ++ GLC K G++ A + F + D G P T ++ + L +
Sbjct: 383 KMNYKKLAPNIVTYSSLIDGLC-KSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKI 441
Query: 304 GFLD-IIEILADKMERSTSCTIQELANAMRG 333
+D IE+ ER + + + G
Sbjct: 442 QLVDKAIELFNLMFERGLTPNVSSYNILING 472
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ + ++Y + L+ ALCK+ + AH + + P + T++ L+ G +
Sbjct: 279 MVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYND 338
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD E D+ ++N L+ CK IDEA + +M P+ +YS
Sbjct: 339 VVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSS 398
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ I + + ++ PNV TYN ++ LCK + V++A +L + M ERG
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SYN ++ +C ++ A+ L M + N++PD TYN ++ L + GR A
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
E++ M G V TY+++ K
Sbjct: 519 ELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G +P + + L+ C V A + FD A+ TP V +Y+IL+ G
Sbjct: 314 MIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNR 373
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF++M +K +I+ ++SL++ +CK+G I A + + G P+ +Y+I
Sbjct: 374 IDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNI 433
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + + M L PNV +YN +I CK+++++EA L +EM R
Sbjct: 434 MLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
PD +YN ++ C ++ A L M D TYN++ ++
Sbjct: 494 LVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF ++ ++ N +L ++ K + A + ++M G P + SI
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + F VL + + N T I++ LC N +V +A + D ++ +G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE +Y ++ C A L+ +M + V P+ YNM++ L + G A
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + RG P V TY+ ++HG C G+ E + MVD + T +L +
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFC-GLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297
Query: 300 LVGLGFL----DIIEILADKMERSTSCTIQELANA 330
L G L D+ ++ ++ +R T L +
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ + + +L ++ K KH A TP++ T SIL+ +G + A +
Sbjct: 76 PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+L+R ++ + ++++ +C G + +A + + G D +Y I+ C+
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
F +L M+ + PNV YN I+ LCK+ V EA L +++ RG +
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGID----- 250
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
PD TY ++ +G++ T + M
Sbjct: 251 ------------------------------PDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R +V TY++++ LC KKG L +A +M++ G P
Sbjct: 281 DRNVNLNVYTYNILIDALC-KKGMLGKAHDMRNLMIERGQRP 321
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEA 63
+ P+I L+ LCK + A + F +A H+ +P V TY+I++ L + + +A
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELF-SAIHDGGPSPNVITYNIMLDALCKIQLVDKA 447
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF+ M ER ++ ++N L+ CK+ IDEA + EM PD+ +Y+ I
Sbjct: 448 IELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDG 507
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
C++ I + + + M +V TYN + K + V
Sbjct: 508 LCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ +++A L +I P +N IL A+ L +M + P T
Sbjct: 57 DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++++ +G A V + KRG+ + T + ++ GLC G++ +A ++ + +V
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLC-INGEVRKALEFHDSVV 175
Query: 283 DEGIPPYSSTVEMLRNRLVGLGF 305
+G T L N L +G
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGL 198
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G+ P + L+ CK+K K A F++ P TY+ L+ G G
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ DEM+ R ++++ +N+++ + KAG + +A + EM G EPD ++Y++
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNL 421
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +++D+ +L MK L P+ FTY+ +I LC + +++A ++LD+MI G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y ++ + + MA+ L+ M V+PD YN ++ L R + + A
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M ++G P+ TY ++ L K G+++ A +YF+ M+ GI P
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFIN-LYSKSGEIQVAERYFKDMLSSGIVP 589
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE I P +Y ++ A CK V + E P + TY+ + GL G +
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAV 292
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++ M+E+ D + L++ CK EA + M S G P+ F+Y+
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I F + +I R+ D M L NV TYN +I + K ++ +A L +EM+ G
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD W+YN ++ + ++ A L+ M + P TY++++ L +A E
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V + M + G P+V Y ++ ++ + E A + ++M+ G+ P
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQES-RYEMAIELLKIMIANGVLP 519
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 39/326 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI+P + + L+ K + A + K + TP+ TYS+L+ GL +
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 60 LSEARKLFDEMLERKCP-----------------------------------VDILAHNS 84
L +A ++ D+M+ D+ +N
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ +C+A ++EA +L +M G +P+A +Y FI+ + ++ +I R M
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+VPN Y +I+ C EA M+E+G PD +Y+AI+ + A+
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV--H 262
+ + K V+PD YN ++ + G ++A+++++ M G P++ Y+ ++ +
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G C K G L EA K F+ M+ +GI P
Sbjct: 707 GYC-KSGNLTEAFKLFDEMISKGISP 731
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P I ++H+L K K A F K P V Y+ L+ G G+
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLE--AMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ +A +L+DEML +I+ +N+L+ CK+GN+ EA + EM S G PD + Y
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I I + ++ + ++ + V ++ +N +I CK+ KV EA +L D+M++
Sbjct: 737 CILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 795
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ P+ +Y ++ + + A +L M N++P+ TY +L ++G +
Sbjct: 796 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 855
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+++ ME RG Y VM C K+GK EA K + EGI
Sbjct: 856 MISLFKDMEARGIACDAIAYGVMASAYC-KEGKSLEALKLLNKSLVEGI 903
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 125/253 (49%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ GI P Y L+ K +++ A F A+ + ++ ++ L+ G++
Sbjct: 724 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKV 783
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EAR+LFD+M+++K +I+ + L++A KA ++EA + +M + P+ +Y+
Sbjct: 784 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 843
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ ++ + + + + M+ + + Y + CK K EA +LL++ + G
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
++ ++A++ + C +++ L L++ M KE + T N +L + G D A++
Sbjct: 904 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 963
Query: 241 VWESMEKRGFYPS 253
V M++ G+ P+
Sbjct: 964 VLGVMQRLGWVPT 976
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 23/281 (8%)
Query: 26 VKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHN 83
V++ + F ++ TP + +YSIL L + G + +A + +++L+ RK P++IL
Sbjct: 101 VRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEIL--- 157
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
++R R G + + IFI F ++ V +
Sbjct: 158 ---------------DSLVRCYREFGGS-NLTVFDIFIDKFRVLGFLNEASSVFIASISE 201
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
P + N ++R L K + +++ M+E PD ++Y ++ HC +V
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+++ M KE P+ TYN + L + G D A EV + M ++G P TY+++V G
Sbjct: 262 KMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
CK+K + +EA FE M G+ P T L + + G
Sbjct: 321 FCKQK-RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ + P+I L+ A K + ++ A Q F D P TY+ L+ +G
Sbjct: 793 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 852
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE--MRSIGAEPDAFSY 117
+ LF +M R D +A+ + A CK G EA +L + + I E D F
Sbjct: 853 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 912
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
IF C+ I +V +L M + L + T N ++ K+ +EA ++L M
Sbjct: 913 LIF--HLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 970
Query: 178 RGANPDEWS 186
G P S
Sbjct: 971 LGWVPTSLS 979
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVG 58
M +G +P + + L LC+ V A + D + T P V TY+ LV
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWR 363
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A +L +EM ++ ++ HN +++++CK G ++EA G L ++ G PD +Y+
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYN 423
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I A+C+A ++ F ++D M L + FT N ++ LCK ++ E+A +LL +R
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE SY ++A + ALRL +M + ++P TYN ++K L R+ R A
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + ++G P +TY++++H C K+G LE A ++ MV+ P T L N
Sbjct: 544 IDKLNELVEKGLVPDETTYNIIIHAYC-KEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 299 RLVGLGFLD 307
L G LD
Sbjct: 603 GLCLHGKLD 611
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 178/337 (52%), Gaps = 8/337 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP++ + ++ +LCK ++ A + A+ P V TY+ L+ G
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L DEM+ + +D N++L +CK ++A +L G PD SY
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + R+ D M L+P++ TYN +I+ LC+ E+++EA L+E++E+G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +YN I+ +C ++ A R +M + + PD T N ++ L G+ D+A
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ES ++G V TY+ ++ +C K G ++ A +F+ M +G+ P + T ++ +
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMC-KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673
Query: 300 LVGLG----FLDIIEILAD--KMERSTSCTIQELANA 330
L G +++ LAD K+ +S +C + + ++A
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSA 710
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 17/292 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGDVGEL 60
G++PS+ + +L AL R + D + P T+++LV G L
Sbjct: 166 GVRPSLQAANAVLSAL-SRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A M D + +N+LL A C+ G + EA +L M+ G P +Y+
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-- 178
+ AF I +V++SM Y P++ TYN + LC+ KV+EA++L DEM ER
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM-ERLS 343
Query: 179 GANPDEWSYN----AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
A PD +YN A + C + ALRL+ M + V P T+N+V+K L + G+
Sbjct: 344 TALPDVVTYNTLVDACFKWRCS----SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ A E + + G P V TY+ ++ C K G + +A + MV +G+
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYC-KAGNVAKAFTLMDEMVGKGL 450
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 2/276 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E + PSI + L+ LC+ + +K A + + + P TY+I++ G+
Sbjct: 515 MIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGD 574
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + ++M+E D++ N+L+ +C G +D+A + G + D +Y+
Sbjct: 575 LENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNT 634
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ D+ + D M+ L P+ FTYN ++ L + + EEA+ +L ++ + G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR-HTYNMVLKLLVRVGRFDRA 238
++ + D A+V + E + TY L L G+ A
Sbjct: 695 KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA 754
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V + M ++G STY ++ GL K++ + A
Sbjct: 755 KAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHA 790
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G+ P + L+ CK+K K A F++ P TY+ L+ G G
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ DEM+ R ++++ +N+++ + KAG + +A + EM G EPD ++Y++
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNL 421
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +++D+ +L MK L P+ FTY+ +I LC + +++A ++LD+MI G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y ++ + + MA+ L+ M V+PD YN ++ L R + + A
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M ++G P+ TY ++ L K G+++ A +YF+ M+ GI P
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFIN-LYSKSGEIQVAERYFKDMLSSGIVP 589
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 3/297 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E GIKP+ + ++ K ++VA ++F D P Y+IL++G DVG
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA F MLE+ DI A+++++ ++ K G EA G+ + G PD F Y+
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ DI ++ D M + PN+ YN +I LCK +V +A +L DE+ E+
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ I+ +C + A +L M + + PD + Y +++ + G ++A
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ +++ S+S ++ ++ C K GK+ EA + F+ MVD+ + P T +L
Sbjct: 787 SLFHEAQQKSV-GSLSAFNSLIDSFC-KHGKVIEARELFDDMVDKKLTPNIVTYTIL 841
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 145/283 (51%), Gaps = 3/283 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P ++ + L+ CK ++ A Q +D H P + Y+ L+ GL +GE+++A
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+LFDE+ E+ D++ ++++++ CK+GN+ EA + EM S G PD + Y I I
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++ + ++ + V ++ +N +I CK+ KV EA +L D+M+++ P+
Sbjct: 776 CGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 834
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ + + A +L M N++P+ TY +L ++G + +++
Sbjct: 835 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 894
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
ME RG Y VM C K+GK EA K + EGI
Sbjct: 895 DMEARGIACDAIAYGVMASAYC-KEGKSLEALKLLNKSLVEGI 936
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P ++ + L+ LC+ K V+ A D + P TY + GE
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F +ML + + + L++ C GN EA + M G PD +YS
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+ + V + +VP+VF YN +I CK +E+A QL DEM+ G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ YN ++ C EV A L + +++++PD TY+ ++ + G A
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++++ M +G P Y +++ G C K+G LE+A F
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDG-CGKEGNLEKALSLF 789
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP+++ L+ A + ++A + + P + Y+ L+ GL +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ L +M E+ + + + + K+G I A ++M S G P+ Y+I
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + M L+P++ Y+ II L KN K +EA + + ++ G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + YN++++ C ++ A +L M + P+ YN ++ L ++G +A
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+++ +E++ P V TYS ++ G C K G L EA K F+ M+ +GI P
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYC-KSGNLTEAFKLFDEMISKGISP 764
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE I P +Y ++ A CK V + E P + TY+ + GL G +
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAV 292
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++ M+E+ D + L++ CK EA + M S G P+ F+Y+
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I F + +I R+ D M L NV TYN +I + K ++ +A L +EM+ G
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD W+YN ++ + ++ A L+ M + P TY++++ L +A E
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V + M + G P+V Y ++ ++ + E A + ++M+ G+ P
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQES-RYEMAIELLKIMIANGVLP 519
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 147/318 (46%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G++P + + L+ K + A + K + TP+ TYS+L+ GL +
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A ++ D+M+ ++ + +L++A + + A +L+ M + G PD F Y+
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A + +L M + PN TY I K+ +++ A + +M+ G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ HCD AL M ++ ++PD Y+ ++ L + G+ A
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V+ K G P V Y+ ++ G C K+G +E+A + ++ M+ GI P L N
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFC-KEGDIEKASQLYDEMLHNGINPNIVVYNTLING 705
Query: 300 LVGLGFLDIIEILADKME 317
L LG + L D++E
Sbjct: 706 LCKLGEVTKARELFDEIE 723
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 125/253 (49%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ GI P Y L+ K +++ A F A+ + ++ ++ L+ G++
Sbjct: 757 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKV 816
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EAR+LFD+M+++K +I+ + L++A KA ++EA + +M + P+ +Y+
Sbjct: 817 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ ++ + + + + M+ + + Y + CK K EA +LL++ + G
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
++ ++A++ + C +++ L L++ M KE + T N +L + G D A++
Sbjct: 937 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996
Query: 241 VWESMEKRGFYPS 253
V M++ G+ P+
Sbjct: 997 VLGVMQRLGWVPT 1009
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 26 VKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHN 83
V++ + F+ ++ TP + +YSIL L + G + +A + +++L+ RK P++IL
Sbjct: 101 VRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEIL--- 157
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
++R R G + + IFI F ++ V +
Sbjct: 158 ---------------DSLVRCYREFGGS-NLTVFDIFIDKFRVLGFLNEASSVFIASISE 201
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
P + N ++R L K + +++ M+E PD ++Y ++ HC +V
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+++ M KE P+ TYN + L + G D A EV + M ++G P TY+++V G
Sbjct: 262 KMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
CK+K + +EA FE M G+ P T L + + G
Sbjct: 321 FCKQK-RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ + P+I L+ A K + ++ A Q F D P TY+ L+ +G
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE--MRSIGAEPDAFSY 117
+ LF +M R D +A+ + A CK G EA +L + + I E D F
Sbjct: 886 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
IF C+ I +V +L M + L + T N ++ K+ +EA ++L M
Sbjct: 946 LIF--HLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 1003
Query: 178 RGANPDEWS 186
G P S
Sbjct: 1004 LGWVPTSLS 1012
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 165/316 (52%), Gaps = 3/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P + L++ LC V A ++ P V TY+ +V G+ G+
Sbjct: 126 VMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGD 185
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A L +M ER D+ ++++++++C+ G ID A + +EM + G + +Y+
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + ++L M ++PNV T+N +I K K++EA +L EMI +G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN+++ +C + ++ A ++ M + N PD T+ ++K +V R D
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + KRG + TYS++V G C + GKLE A + F+ MV G+ P T +L +
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFC-QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 300 LVGLGFLD-IIEILAD 314
L G L+ +EI D
Sbjct: 425 LCDNGKLEKALEIFED 440
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 166/335 (49%), Gaps = 6/335 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E +K ++ ++ +LC+ + A F + + ++ TY+ LV GL G+
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ +L +M RK +++ N L++ K G + EA+ + +EM + G P+ +Y+
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +LD M R N P++ T+ +I+ CK ++V+E +L ++ +RG
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ +A L M V+PD TY ++L L G+ ++A
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++K + Y++++ G+CK GK+E+A F + +G+ P T ++ +
Sbjct: 436 EIFEDLQKSKMNLDIVMYTIIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 494
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANA 330
L G L IL KME CT L A
Sbjct: 495 LCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M I P++ + L+ K ++ A++ + + +P TY+ L+ G
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNR 325
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSEA + D M+ C DI+ SL++ CK +DE + R++ G + +YSI
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC++ + + M ++P+V TY ++ LC N K+E+A ++ +++ +
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D Y I+ C +V A L + + V P+ TY +++ L + G A
Sbjct: 446 MNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 505
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ME+ G P+ TY+ ++ + G L + K E M G +S+++M+ +
Sbjct: 506 ILLRKMEEDGNEPNDCTYNTLIRAHL-RDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 564
Query: 300 L 300
L
Sbjct: 565 L 565
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G+ D+ E +A LF EM+ + ++ + + + ++M G
Sbjct: 37 LRSGIVDIKE-DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNG 95
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ ++ +I I+ FC + VL + + P+ T+N +I LC KV EA
Sbjct: 96 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L+ M+E G P+ +YN+I+ C + ++AL L+ +M + NV D TY+ ++ L
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
R G D A +++ ME +G S+ TY+ +V GLC K GK + + + M I P
Sbjct: 216 CRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC-KAGKWNDGVQLLKDMTSRKIIPN 274
Query: 290 SSTVEMLRNRLVGLGFL 306
T +L + V G L
Sbjct: 275 VITFNVLIDVFVKEGKL 291
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ +S G+ + + +M +I N ++ C+ A+ +
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L ++ +G EPD +++ I+ C + + ++ M PNV TYN I+ +CK
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ A LL +M ER D ++Y+ I+ C ++ A+ L M + + T
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + G+++ ++ + M R P+V T++V++ K+GKL+EA + ++ M
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV-KEGKLQEANELYKEM 301
Query: 282 VDEGIPPYSSTVEML 296
+ +GI P + T L
Sbjct: 302 ITKGISPNTITYNSL 316
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ +CK V+ A F + + P V TY++++ GL G LSEA L +M E
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+ +N+L+ A + G++ + ++ EM+S G DA S + I A
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +L+ +C+ V+ A +F N + P +Y+I+++GL
Sbjct: 227 MHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAER 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL +EM + CP +++ N L+ +C+ G ++ A +L +M G P++ SY+
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ IH ++ M P++ +YN ++ LC+N +V+ A +LL ++ ++G
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG 406
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P SYN ++ + AL L+ MT + + PD TY+ + L R R + A
Sbjct: 407 CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAV 466
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ G P+ + Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 467 RTFCKVQDMGIRPTAALYNAILLGLCKRR-ETHNAIDLFAYMISSGCMPNESTYTIL 522
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 3/281 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P + + ++ C + A + + E P TY+ L+RGL G S A +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE--PDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
++M R C D++ + LLEA CK +A +L EM G PD +Y++ ++ C+
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ L ++ Y PN +YN +++ L E+ E+A +L++EM +G P+ ++
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++++ C R V A+ ++ +M + P+ +YN +L + + +A E E M
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
RG YP + +Y+ ++ LC + G+++ A + + D+G P
Sbjct: 370 RGCYPDIVSYNTLLTALC-RNGEVDVAIELLHQLKDKGCSP 409
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 12/277 (4%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPT---VKTYSILVRGLGDVGELSEARKLFDEMLER 73
L L +R + A + D+ P+ V + L++ L G ++AR++ L
Sbjct: 74 LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRV----LAA 129
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
P D++ +N+++ C AG +D A ++ +M EPDA++Y+ I C +
Sbjct: 130 SGP-DVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNA 185
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
VL+ M R +P+V TY ++ CK ++A +LLDEM ++G PD +YN +L
Sbjct: 186 LAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C V A+ + + P+ +YN+VLK L R++ A ++ E M +G P+
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPN 305
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
V T+++++ LC ++G +E A + E M G P S
Sbjct: 306 VVTFNMLISFLC-RRGLVEPAMEVLEQMPQYGCTPNS 341
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M ++G P+ + LLHA CK+K + A +F + P + +Y+ L+ L GE
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L ++ ++ C ++++N++++ + KAG EA +L EM S G +PD +YS
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C + I R ++ + P YN I+ LCK + A L MI G
Sbjct: 452 IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSG 511
Query: 180 ANPDEWSYNAI---LAY 193
P+E +Y + LAY
Sbjct: 512 CMPNESTYTILVEGLAY 528
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 136/247 (55%), Gaps = 1/247 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
FTP + TY++L+ G V L EA +++++M++ DI+AHN +LE + ++ +A
Sbjct: 3 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 62
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ M+S G P+ SY+I I FC+ + + + D M L P+ Y C+I
Sbjct: 63 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 122
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+K++ Y+LL EM E+G PD +YNA++ ++ R+ +M + + P
Sbjct: 123 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 182
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
HT+NM++K ++ VW+ M K+G P ++Y+V++ GL +GK EAC+Y E
Sbjct: 183 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI-SEGKSREACRYLE 241
Query: 280 MMVDEGI 286
M+D+G+
Sbjct: 242 EMLDKGM 248
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 72 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 131
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + + +M EP ++++ + +
Sbjct: 132 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 191
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V D M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 192 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 251
Query: 184 EWSYNAILA 192
YN A
Sbjct: 252 LIDYNKFAA 260
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +Y +L C + A R+ M + PD +N++L+ L+R + A +
Sbjct: 4 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 63
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M+ +G P+V +Y++M+ CK+ +E A +YF+ MVD G+ P ++ L +
Sbjct: 64 LFHVMKSKGPCPNVRSYTIMIRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---I 119
Query: 301 VGLG 304
G G
Sbjct: 120 TGFG 123
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
E P+ TY ++L RV A +W M G P + ++VM+ GL + K
Sbjct: 1 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK-S 59
Query: 273 EACKYFEMMVDEG-IPPYSSTVEMLRN 298
+A K F +M +G P S M+R+
Sbjct: 60 DAIKLFHVMKSKGPCPNVRSYTIMIRD 86
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ +D K P +Y++L+RGL G+
Sbjct: 173 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 232
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N + G
Sbjct: 233 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 267
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 146/299 (48%), Gaps = 3/299 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+ IY L+ C + A F K P V T++ L+ GL +SEA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF +M E C +++ +L+ +C+ G I EA +L M G +P +Y +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 125 CEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D S +L M+ + ++PNV Y+ II LCK+ + +A L EM E+G PD
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + A +L+ M + + PD TYN ++ V+ G+F A E+++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M RG P+ TYS M+ G CK+ +L+ A F +M +G P T L + G
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQN-RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M+E G++P+ ++ +CK A + P V YS ++ L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDG 269
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A+ LF EM E+ D+ +NS++ C +G +A +L+EM PD +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TY+ +I CK +++ A + M +
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++N ++ +C ++ + L+ MT+ ++ D TYN ++ VG + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T ++ GLC GKL++A + F++M
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALEMFKVM 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-----VKTYSILVRGLG 55
M G P++ + L+ C K + + HE T T TY+ L+ G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELL----HEMTETGLVADTTTYNTLIHGFY 441
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI------- 108
VG+L+ A L EM+ DI+ ++LL+ +C G + +A M + M+
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 109 ----GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
G EPD +Y+I I + + M +VP+ TY+ +I LCK +
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA Q+ D M + +P+ ++ ++ +C V+ L L M + ++ + TY
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
M+ G+ P I D LL LC +K A + F +A H F P V+TY+
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ EA +L++EM R D + ++S+++ +CK +DEA M M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ +++ I+ +C+A + + M R +V N TY +I K + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+ EMI G PD + +L + E+ A+ ++ ++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G ++ L +A LF +ML + ++ L+ + + D + ++M
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D +S++I I FC + + + + L P+V T+N ++ LC ++V EA
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L +M E P+ ++ ++ C + A+ L+ RM ++ + P + TY ++ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 230 VRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G A ++ ME+ P+V YS ++ LC K G+ +A F M ++GI P
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC-KDGRHSDAQNLFTEMQEKGIFP 288
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 173/379 (45%), Gaps = 38/379 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+KP ++ + L++ LCK + A + D P T++ ++ ++ EA
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++F+EML+R D+++ +S++ + G + A +M+ +G PD Y+I I+
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C +D+ ++ + M V +V TYN ++ LC+ + +++A +L EM+ERG PD
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ ++ +C + AL L MT ++ PD TYN ++ +VG ++A E+W
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528
Query: 244 SMEKRGFYPSVSTYSVMVHGLCK----------------------------------KKG 269
M R +PS ++S++++G C + G
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELAN 329
L +A + M+ EG+PP T L N V D L + ME N
Sbjct: 589 NLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYN 648
Query: 330 AMRGKTGF-RKSRSEETEL 347
A+ G GF R R +E E+
Sbjct: 649 AILG--GFSRHGRMQEAEM 665
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 37/337 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+ P + ++ + + A +F+ K P Y+IL+ G +
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A K+ +EM+ER C +D++ +N+LL +C+ +D+A + +EM G PD ++ +
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE------------- 166
IH +C+ ++ + ++M +L P+V TYN ++ CK ++E
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 167 ----------------------EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
EA++L DEM E+G P + N I+ + ++ A
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M E V PD TYN ++ V+ FDRA + +ME+RG P++ TY+ ++ G
Sbjct: 595 DFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGF 654
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ G+++EA M+D+GI P ST L N V
Sbjct: 655 -SRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYV 690
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G + + LL+ LC+ K + A + F + + P T + L+ G G
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF+ M R D++ +N+L++ CK G +++A + +M S P S+SI
Sbjct: 485 MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSI 544
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + FR+ D MK + P + T N II+ + + +A L+ MI G
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ + A LI M + ++P+ TYN +L R GR A
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAE 664
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V M +G P STY+ +++G K ++EA + + M+ G P
Sbjct: 665 MVLHKMIDKGINPDKSTYTSLINGYVSKD-NMKEAFRVHDEMLQRGFVP 712
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 37/336 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G SI + LL A+ K V +A + + D K V T +I+V L G+L
Sbjct: 184 GFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNV 243
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
EM E+ D++ +N+L+ A C+ G + EA G++ M G +P F+Y+ I+
Sbjct: 244 GVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALING 303
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ RVLD M L PN T+N ++ + C+ E V EA ++ +EM++RG PD
Sbjct: 304 LCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPD 363
Query: 184 EWSYNAI-------------LAY----------------------HCDRAEVNMALRLIT 208
S+++I LAY +C +V+ AL++
Sbjct: 364 LISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRN 423
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + + D TYN +L L R D A E+++ M +RG +P T + ++HG C K
Sbjct: 424 EMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYC-KD 482
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G + +A FE M + P T L + +G
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K F ++ + L+ + VG + A K++++ ++ V++ N ++ A+CK G +D
Sbjct: 182 KRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLD 241
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
L EM G D +Y+ ++A+C + F ++D M L P +FTYN +I
Sbjct: 242 NVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALI 301
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK E A ++LDEM+ G P+ ++N +L C + +V A R+ M + V+
Sbjct: 302 NGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVV 361
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD +++ ++ + R G RA +E M+ G P Y+++++G C+ + A K
Sbjct: 362 PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND-DVSGALK 420
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLV-GLGFLDIIEILADKMERSTSCTIQELANAMRG 333
MV+ G T L N L G D E+ + +ER L + G
Sbjct: 421 MRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 122/214 (57%), Gaps = 1/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP + + L+ CK ++ A + ++D E P+ ++SIL+ G +G +SEA
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L+DEM E+ ++ N++++ +AGN+ +A+ L M S G PD +Y+ I++F
Sbjct: 560 RLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSF 619
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + F ++++M+ L+PN+ TYN I+ ++ +++EA +L +MI++G NPD+
Sbjct: 620 VKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDK 679
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+Y +++ + + + A R+ M + +PD
Sbjct: 680 STYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V + +L+R +L E + F + +R V I A N+LL A+ K G +D A +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+ G + ++ +I ++A C+ + +V L M+ + ++ TYN ++ C+
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
V EA+ L+D M +G P ++YNA++ C A R++ M + P+ T+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+L R A V+ M +RG P + ++S +V G+ + G+L A YFE M
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV-GVFSRNGELGRALAYFEKMKG 392
Query: 284 EGIPPYSSTVEMLRN 298
G+ P + +L N
Sbjct: 393 VGLVPDTVIYTILIN 407
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD-VGE 59
+ G +P + + LL ALC+ K+V+ A +++ EF K++++++ G + V
Sbjct: 205 LPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRS 264
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++ ++ M + D++++ S++ KAG++D + M+ G PD Y+
Sbjct: 265 VREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNA 324
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A + ++ ++ SM+ + P+ T+N +IR LCK +V+EA ++LD+M+ RG
Sbjct: 325 VVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 384
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +++A+L EV L+ +M + P+ T+ M+++ R + D
Sbjct: 385 LSPSVRTFHALLDVARSPIEV---FDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVE 441
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++W +M G P S Y V++HGL G+LEE+ KY+E M +G PP T EM++
Sbjct: 442 KLWSAMPANGLSPDRSAYIVLIHGLF-LNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAW 500
Query: 300 LVG 302
L G
Sbjct: 501 LSG 503
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A++S+L + K D+A +L +MR S A P A + I +C A D+ +
Sbjct: 147 AYHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVM--LLIRRYCAARDVAGAVAAFRA 204
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL--------------------------- 172
+ P V ++ ++ LC+ + V++A LL
Sbjct: 205 LPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRS 264
Query: 173 --------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ M +G D SY ++++ ++ ++L RM + V+PDR YN
Sbjct: 265 VREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNA 324
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
V+ L + + A + SME++G P +T++ ++ LCK + +++EA K + M+
Sbjct: 325 VVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKAR-QVQEARKMLDDMLGR 383
Query: 285 GIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
G+ P T L + V +++ ++L DKM+
Sbjct: 384 GLSPSVRTFHALLD--VARSPIEVFDLL-DKMK 413
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y ++ LC+ K + F + + P Y+ L+ G G++ A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F EM R D+L + +++ C+ G++ EA + EM G EPD+ +++ I+
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + FRV + M + PNV TY +I LCK ++ A +LL EM + G P+
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+I+ C + A++L+ + D TY ++ + G D+A E+ +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G P++ T++V+++G C G LE+ K M+ +GI P ++T L
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFC-LHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CKR ++ A +FF + + TP V TY+ ++ G +G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EM + D + L+ CKAG++ +A + M G P+ +Y+
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ D+ S +L M + L PN+FTYN I+ LCK+ +EEA +L+ E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D +Y ++ +C E++ A ++ M + + P T+N+++ G +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M +G P+ +T++ +V C + L+ A ++ M G+ P T E L
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRN-NLKAATAIYKDMCSRGVGPDGKTYENL 637
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 151/283 (53%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P +L++ CK H+K A + ++ + +P V TY+ L+ GL G+L A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + +I +NS++ +CK+GNI+EA ++ E + G D +Y+ + A
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ ++ +L M L P + T+N ++ C + +E+ +LL+ M+ +G P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ +C R + A + M V PD TY ++K + A +++
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M+ +GF SVSTYSV++ G K+K K EA + F+ M EG+
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRK-KFLEAREVFDQMRREGL 697
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 152/333 (45%), Gaps = 3/333 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G+ ++ + ++H +C+ +K AH + + +TP V +YS +V G GEL
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ KL + M + + + S++ +C+ + EA EM G PD Y+ I
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ DI + + M ++ P+V TY II C+ + EA +L EM +G
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++ ++ +C + A R+ M + P+ TY ++ L + G D A E+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K G P++ TY+ +V+GLC K G +EEA K G+ + T L +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLC-KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 302 GLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
G +D EIL + + + TI M G
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 43/335 (12%)
Query: 15 QLLHALCKRKHVKVAH---QFFD---NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFD 68
L+ + +R + V QFFD ++ + + + + L D G L EAR++F+
Sbjct: 140 SLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFE 199
Query: 69 EMLE-------------------------------RKCP-----VDILAHNSLLEAMCKA 92
+ML R+ P ++ ++N ++ +C+
Sbjct: 200 KMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL 259
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G I EAH +L M G PD SYS ++ +C ++ V+++++ MKR L PN + Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
II LC+ K+ EA + EMI +G PD Y ++ C R ++ A + M
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++ PD TY ++ ++G A +++ M +G P T++ +++G C K G ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC-KAGHMK 438
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+A + M+ G P T L + L G LD
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ L+ LCK + A++ + K P + TY+ +V GL G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL E D + + +L++A CK+G +D+A +L+EM G +P ++++
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN------CI------------------ 155
++ FC + ++L+ M + PN T+N CI
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 156 -----------IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++ CK ++EA+ L EM +G + +Y+ ++ R + A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 205 RLITRMTKENVMPDRHTYNM 224
+ +M +E + D+ ++
Sbjct: 687 EVFDQMRREGLAADKEIFDF 706
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P+I + L++ C ++ + + P T++ LV+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ +M R D + +L++ CKA N+ EA + +EM+ G +YS+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE-- 177
I F + V D M+R L + ++ K ++ + +DE+IE
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 731
Query: 178 ------RGAN 181
RGAN
Sbjct: 732 LVDEQLRGAN 741
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 154/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI P + L++ LC +K A + F+ K P V +Y+ ++ GL G
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +F +M + C +++ ++++++++CK +++A L EM G P+ F+Y+
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC ++ R+ M +++PN T+ ++ LCK V EA + + M E+G
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YNA++ +C + +N A ++ M ++ P H+YN+++ + R D A
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + P TYS ++ GLC + G+ +EA F+ M G P T +L +
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLC-QLGRPKEALNLFKEMCSYGPHPNLVTYVILLDG 452
Query: 300 LVGLGFLD 307
G LD
Sbjct: 453 FCKHGHLD 460
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV +PS+ + + L + K+K + T V + +IL+ L +
Sbjct: 84 MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + + +M + D + N+L+ +C G I EA + EM G EP+ SY+
Sbjct: 144 VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTT 203
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + V M++ PNV TY+ II LCK+ V +A + L EM+ERG
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN+I+ C+ ++N A RL M +VMP+ T+ +++ L + G A
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR 323
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V+E+M ++G P +STY+ ++ G C ++ + EA K FE+M+ +G P + + +L N
Sbjct: 324 LVFETMTEKGVEPDISTYNALMDGYCLQR-LMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP++ ++ +LCK + V A +F + P V TY+ +V G ++G+
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +LF EM+ R + + L++ +CK G + EA + M G EPD +Y+
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C ++ +V + M R P +YN +I CK+ +++EA LL EM +
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y+ ++ C AL L M P+ TY ++L + G D A
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEAL 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +SM+++ P++ Y++++ G+ GKLE A + F + +G P T ++
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMF-IAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKG 522
Query: 300 LVGLGFLDIIEILADKME 317
L+ G D L KME
Sbjct: 523 LLKEGLSDEAYDLFRKME 540
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE GI P+++ + ++H C + A + F + + P T++ILV GL G
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR +F+ M E+ DI +N+L++ C ++EA + M G P A SY+I
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C++ + +L M L P+ TY+ +++ LC+ + +EA L EM G
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTK--------------------------- 212
+P+ +Y +L C ++ AL+L+ M +
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498
Query: 213 --------ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ PD TY +++K L++ G D A +++ ME GF P+ +Y+VM+ G
Sbjct: 499 ELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + A + + MV + ST +ML
Sbjct: 559 LQNQDS-STAIRLIDEMVGKRFSVNLSTFQML 589
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ +S +I I+ C N + VL M + + P+ T+N +I LC K++EA +L
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+EM++RG P+ SY ++ C +MA+ + +M + P+ TY+ ++ L +
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ A E M +RG P+V TY+ +VHG C G+L EA + F+ MV + P + T
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFC-NLGQLNEATRLFKEMVGRDVMPNTVT 305
Query: 293 VEMLRNRLVGLGFLDIIEILADKM 316
+L + L G + ++ + M
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETM 329
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + + L++ CK + + A H+ P TYS L++GL +G
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LF EM +++ + LL+ CK G++DEA +L+ M+ EP+ Y+I
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + P++ TY +I+ L K +EAY L +M + G
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P+ SYN ++ + + A+RLI M + + T+ M+L L
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDL 592
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M +G P++ LL CK H+ A + + K + P + Y+IL+ G+ G+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A++LF ++ DI + +++ + K G DEA+ + R+M G P++ SY++
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
I F + D + R++D M N+ T+ ++ ++E + +
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQ 601
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N V++A M+ P + L + + + + L +M V + ++
Sbjct: 71 NVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYS 130
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N+++ L R+ D + V M K G +P T++ +++GLC +GK++EA + F M
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLC-NEGKIKEAVELFNEM 189
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
V G P + + N L G + + KME++
Sbjct: 190 VKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN 227
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV T+ ILV GL L++A +L + M ER C + L N +++A+CK G EA+G
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGY 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ MRS+G P +Y+I I FC+ +H +L M PN TYN + LCK
Sbjct: 68 IETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCK 127
Query: 162 NEKVE-----------------------------------EAYQLLDEMIERGANPDEWS 186
KV+ EAY LLDEM G P
Sbjct: 128 YGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGC 187
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YNAIL++ C + +N A +L RMT ++PD T+ M++ R R D A + + M+
Sbjct: 188 YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
G P Y+ ++ L + G++ EA + + M+ G+ P S T ++R +
Sbjct: 248 SAGLAPREVIYNTLIDAL-NRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQ 299
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M E G P+ + ++ ALCK A+ + + + +PT+ TY+IL+ G +
Sbjct: 36 MAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEK 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ EM R + + +N+ L +CK G +D+A + R M D + Y+
Sbjct: 96 LHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTT 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + + +LD M+ VP YN I+ LCK ++ EA++L M G
Sbjct: 156 LIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG 215
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ +C ++ AL L+ +M + P YN ++ L R GR A
Sbjct: 216 ILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAY 275
Query: 240 EVWESMEKRGFYPSVSTYSVM 260
+ + M RG P+ TY++M
Sbjct: 276 RLLQEMISRGLSPNSRTYALM 296
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M E+ C ++ L++ +CKA + +A ++ M G P+A ++ + A C+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ +++M+ + P + TYN +I CK EK+ A ++L EM RG P+ +YN
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
L C +V+ AL L MT++ + D + Y ++ L + G+ A + + ME G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P Y+ ++ LCK ++ EA K F+ M GI P T M+
Sbjct: 181 CVPKPGCYNAILSWLCKGS-RINEAHKLFKRMTGSGILPDWLTFGMM 226
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 5/230 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M G+ P+I + L+ CK + + A + HE P TY+ + GL
Sbjct: 71 MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHE--PNHVTYNTFLHGLCKY 128
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ +A LF M E+K +D+ + +L++ +C+AG + EA+ +L EM + G P Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + C+ + I+ ++ M ++P+ T+ ++ C+ ++++A LL +M
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G P E YN ++ V+ A RL+ M + P+ TY ++ K
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRK 298
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + LL+ LCK + + A + + P + T++ L+ G G+
Sbjct: 42 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 101
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +LFD ML ++ DI+ +N+L++ MC+ G++D+A+ + +M S P+ +YSI
Sbjct: 102 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 161
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE + F LD M ++PN+ TYN II+ C++ V + + L +M+
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN ++ + +++ A +L+ M KE V PD TYNM++ G A
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M +G P TY M++G G +EA + + M+ G P
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHV-TAGNSKEAFQLHDEMLQRGFAP 329
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 134/259 (51%), Gaps = 1/259 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
P Y++++ G G +S+A ++ DEM+ C D++ +N+LL +CK + +A
Sbjct: 12 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 71
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G+L EMR G PD +++ IH +C + ++ D+M L P++ TYN +I +
Sbjct: 72 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+ +++A L D+M R P+ +Y+ ++ HC++ +V A + M + ++P+
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TYN ++K R G + + + M P + TY+ ++HG K+ K+ +A K
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED-KMHDAFKLLN 250
Query: 280 MMVDEGIPPYSSTVEMLRN 298
MM E + P T ML N
Sbjct: 251 MMEKEKVQPDVVTYNMLIN 269
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 113/197 (57%), Gaps = 5/197 (2%)
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LREMR G PD Y++ I FC A + RV D M +P+V TYN ++ LCK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ +A LL+EM ERG PD ++ ++ +C +++ AL+L M + + PD T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ + R G D+A ++W+ M R +P+ TYS+++ C +KG++E+A + + M
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC-EKGQVEDAFGFLDEM 182
Query: 282 VDEGIPP----YSSTVE 294
+++GI P Y+S ++
Sbjct: 183 INKGILPNIMTYNSIIK 199
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P I + L+ +C++ + A+ +D+ E P TYSIL+ + G++ +A
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
DEM+ + +I+ +NS+++ C++GN+ + L++M PD +Y+ IH +
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + +H F++L+ M++ + P+V TYN +I + V+EA + ++M +G PD
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++Y +++ H A +L M + PD
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD-VGE 59
+ G +P + + LL ALC+ K+V+ A +++ EF K++++++ G + V
Sbjct: 207 LPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRS 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++ ++ M + D++++ S++ KAG++D + M+ G PD Y+
Sbjct: 267 VREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNA 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A + ++ ++ SM+ + P+ T+N +IR LCK +V+EA ++LD+M+ RG
Sbjct: 327 VVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +++A+L EV L+ +M + P+ T+ M+++ R + D
Sbjct: 387 LSPSVRTFHALLDVARSPIEV---FDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVE 443
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++W +M G P S Y V++HGL G+LEE+ KY+E M +G PP T EM++
Sbjct: 444 KLWSAMPANGLSPDRSAYIVLIHGLF-LNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAW 502
Query: 300 LVG 302
L G
Sbjct: 503 LSG 505
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 42/273 (15%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A +S+L + K D+A +L +MR S A P A + I +C A D+ +
Sbjct: 149 ACHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVM--LLIRRYCAARDVAGAVAAFRA 206
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL--------------------------- 172
+ P V ++ ++ LC+ + V++A LL
Sbjct: 207 LPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRS 266
Query: 173 --------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ M +G D SY ++++ ++ ++L RM + V+PDR YN
Sbjct: 267 VREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNA 326
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
V+ L + + A + SME++G P +T++ ++ LCK + +++EA K + M+
Sbjct: 327 VVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKAR-QVQEARKMLDDMLGR 385
Query: 285 GIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
G+ P T L + V +++ ++L DKM+
Sbjct: 386 GLSPSVRTFHALLD--VARSPIEVFDLL-DKMK 415
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 164/332 (49%), Gaps = 33/332 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ GI P ++ L+ AL K ++ A +FF+ K+ +P V TY+ LV GL G
Sbjct: 313 MIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGR 372
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++F EM E C D +A+N+L++ + KAG D A G+ +EM+ G P+ +Y+I
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +++ +K VP+VFTYN +I L K ++++ ++ EM+E+G
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Query: 180 A-------------------------------NPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ E +YN +++ V+ A++L+
Sbjct: 493 GECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLE 552
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M K +P TY ++ L + GR D A + MEK+G PSV TYS ++ K+
Sbjct: 553 VMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRD 612
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ EE+ F+ MV +G ST ++ N L
Sbjct: 613 QE-EESLSLFDEMVRKGCVADVSTYSLVINCL 643
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G++P + + LL +L K + + A Q F+ + P Y+I+V GL
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL D M + D+ + SLL+ + K+G ++EA M +M G EPD +Y+
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +M + VP+V TY+ +I L K +VEEAY + I +G
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y++++ + V+ AL L M + P+ TYN +L L + GR + A
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++ E MEK G P + TY++++ G+ K G ++EA YF+ M ++GI P ++S +E
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGV-GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIES 957
Query: 296 L 296
L
Sbjct: 958 L 958
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 72/376 (19%)
Query: 14 DQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA--------- 63
+ L+ A HV A + + KHE PTV TY+ LV GLG G L EA
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Query: 64 --------------------------RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
LFDEM+ + C D+ ++ ++ +CK+ ++D+
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651
Query: 98 AHGMLREMRSIGAEP-----------------------------------DAFSYSIFIH 122
A + M+ G EP D F Y+I ++
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
++N + +++DSMK N++P++FTY ++ L K+ ++EEA+ + +M E G P
Sbjct: 712 GLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y +++ +++ AL + M K+ +PD TY+ ++ L + GR + A +
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E+ +G P+V YS ++ KKG ++ A + FE M PP T L + L
Sbjct: 832 ENSISKGCTPNVGVYSSLIDSF-GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAK 890
Query: 303 LGFLDIIEILADKMER 318
G L++ E L ++ME+
Sbjct: 891 AGRLNVAEKLLEEMEK 906
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 153/296 (51%), Gaps = 2/296 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I P ++ LL L K ++ A F E P V Y+ L+ LG G+LS A
Sbjct: 734 ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL 793
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F M +++C D++ ++SL++++ K G ++EA+ S G P+ YS I +F
Sbjct: 794 IIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + + M+R PN+ TYN ++ L K ++ A +LL+EM + G PD
Sbjct: 854 GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDL 913
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ V+ A RM ++ ++PD T+ +++ L +V + A E+++S
Sbjct: 914 VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDS 973
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
ME+ G+ PSV TY+V++ + + GK+ EA F M +G P T+ +++ L
Sbjct: 974 MEEEGYNPSVVTYNVLID-ILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL 1028
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 139/255 (54%), Gaps = 5/255 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L+ G + EA KL + M + +C ++ + +L++ + KAG +DEA +LREM
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G EP +YS + +F + + + D M R V +V TY+ +I LCK++ V
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++A + M E G P +Y +L+ +++ AL++ + + +++PD YN++
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ LV+ R D A ++ +SM+ + P + TY+ ++ GL K G+LEEA F M +EG
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL-GKSGRLEEAFNMFTKMTEEG 768
Query: 286 IPP----YSSTVEML 296
P Y+S +++L
Sbjct: 769 HEPDVVAYTSLMDVL 783
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + ++ L K A Q F + K + P V TY+ L+ LG G+
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477
Query: 60 LSEARKLFDEMLERKCPVDI-------------------------------LAHNSLLEA 88
+ + + EM+E+ I + +N+L+ A
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
G++DEA +L M+ P +Y+ + +A + +L M++ P+
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
V TY+ ++ K ++ EE+ L DEM+ +G D +Y+ ++ C +V+ AL +
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
RM +E + P Y +L LV+ + D A +++ +++ P Y++MV+GL K
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717
Query: 269 GKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+++EACK + M ++ I P Y+S ++ L
Sbjct: 718 -RVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G + S++ L LL +V A + F+ K P+ Y+ ++ L G A
Sbjct: 212 GHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSA 271
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F ++ + + D + + ++G +D A ++EM G +P ++++ I A
Sbjct: 272 VIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDA 331
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
++ +I + + MK PNV TY ++ L K ++EEA ++ EM E +PD
Sbjct: 332 LVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPD 391
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ E +MA L M ++P+ TYN+++ +L + GR A +++
Sbjct: 392 AIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFH 451
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++++G P V TY+ ++ L K G++++ + MV++G
Sbjct: 452 DLKEQGAVPDVFTYNTLIDVL-GKGGQMDKVLAIIKEMVEKG 492
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 28/328 (8%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
+F I+P +H+ + + A + K P V T+++L+ L G +
Sbjct: 280 QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNID 339
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA K F+ M +C +++ + +L+ + KAG ++EA + EM+ PDA +Y+ I
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+A + + MK LVPN+ TYN +I L K + EA+QL ++ E+GA
Sbjct: 400 DGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV 459
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKEN----VMPDRHTYNMVLKLLVRVGRFDR 237
PD ++YN ++ +++ L +I M ++ + D + + G +
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHE--------GTIEG 511
Query: 238 ATEVWESMEKRGFYPSVS-------TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
A E YPS+ TY+ ++ G ++EA K E+M P
Sbjct: 512 ADRTVE-------YPSLGFKSLGEITYNTLMSAFIHN-GHVDEAVKLLEVMKKHECIPTV 563
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMER 318
T L + L G LD L +ME+
Sbjct: 564 VTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 20 LCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV 77
+ +K + +A FF A + ++ TV TY+++++ L E ++ M + +
Sbjct: 156 VVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRI 215
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+ SLL N+ A + +M+S G P Y+ + + HS V
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVF 275
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ ++ + P+ T+ + ++ +++ A + + EMI+ G +P ++ ++
Sbjct: 276 GKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
++ A + M P+ TY ++ L + GR + A EV+ M++ P Y
Sbjct: 336 GNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAY 395
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ GL K G+ + AC F+ M D G+ P T ++
Sbjct: 396 NTLIDGL-GKAGEADMACGLFKEMKDRGLVPNLRTYNIM 433
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y++ I A + +V ++L +M + ++ ++R V A ++ ++M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G NP YN +L + A+ + ++ + + PD T+ + + R GR
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A E + M K G P V T++V++ L K G ++EACK+F M + P T
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS-GNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 296 LRNRLVGLGFLD 307
L N L G L+
Sbjct: 363 LVNGLAKAGRLE 374
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+I + LL L K + VA + + K P + TY+IL+ G+G +G + EA
Sbjct: 876 PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY 935
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F M E+ D++ SL+E++ K + EA + M G P +Y++ I
Sbjct: 936 FKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGR 995
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
A +H + MK +P+ T + R L E+
Sbjct: 996 AGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQ 1033
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 160/301 (53%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G+KP++ + +++ +CK ++ A + FD E P +Y+ LV G G
Sbjct: 211 MLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGC 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F EM ++ D++ SL+ MCKAGN++ A ++R+MR G + + +++
Sbjct: 271 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTA 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + + M++ + P+V YN +I C +++EA +LL EM +G
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ I++ +C + + A L +M ++ V+PD TY+ ++++L R A
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++M K G P TY+ ++ G C K+G +E A + MV G+ P T +L N
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHC-KEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509
Query: 300 L 300
L
Sbjct: 510 L 510
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++Y + L+ ALC R H K A D P V TY+ LV GE
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L ML+ +++ NS++ MCKAG +++A + EM G PD SY+
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNT 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+A H V M + ++P+V T+ +I +CK +E A L+ +M ERG
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+E ++ A++ C + ++ AL + M + + P YN ++ VGR D A
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E+ ME +G P V TYS ++ C K A + + M+++G+ P YSS + +
Sbjct: 381 ELLHEMEAKGLKPDVVTYSTIISAYC-KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 439
Query: 296 L 296
L
Sbjct: 440 L 440
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P+V Y+ ++ L D L+ AR+ FD ML ++ +N L+ A+C G+ EA
Sbjct: 112 YVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+LR+MR G P+ +Y+ + AF A ++ R++ M L PN+ T+N ++ +
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK K+E+A ++ DEM+ G PD SYN ++ +C + AL + MT++ +MPD
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T+ ++ ++ + G + A + M +RG + T++ ++ G C KKG L++A
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFC-KKGFLDDALLAVR 349
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
M I P L N +G +D L +ME
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 53/350 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI P + L+H +CK +++ A + T++ L+ G G
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A M + + ++ +N+L+ C G +DEA +L EM + G +PD +YS
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ D HS F + M ++P+ TY+ +IR LC+ +++ +A+ L MI+ G
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y +++ HC V AL L +M K V+PD TY++++
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL ++ G + A +V++SM R
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRN 298
+ S YSV++HG C + G + +A + + M+ G P S ST+ ++R
Sbjct: 581 WNLDGSVYSVLIHGHC-RAGNVMKALSFHKQMLQRGFAPNSTSTISLIRG 629
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 139/295 (47%), Gaps = 19/295 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IKPS+ + L++ C + A + + + P V TYS ++ + A
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 415
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +MLE+ D + ++SL+ +C+ + +AH + + M +G +PD F+Y+ I
Sbjct: 416 ELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 475
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++ + D M + ++P+V TY+ +I L K+ + EA QLL ++ P
Sbjct: 476 CKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPAN 535
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMP----------------DRHTYNMVLKL 228
Y+A++ + C +AE+ L L+ + +M D Y++++
Sbjct: 536 TKYDALM-HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 594
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
R G +A + M +RGF P+ ++ ++ GL + G + EA + + +++
Sbjct: 595 HCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL-FENGMVVEADQVIQQLLN 648
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P + L+ CK +V+ A D K P V TYS+L+ GL
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Query: 60 LSEARKLF-----DEMLERKCPVDILAHN----------SLLEAMCKAGNIDEAHGMLRE 104
EA++L +E + D L H +LL+ C G ++EA + +
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 575
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M D YS+ IH C A ++ M + PN + +IR L +N
Sbjct: 576 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGM 635
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
V EA Q++ +++ + D + A++ + + V+ L ++ M K+ ++P
Sbjct: 636 VVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +YNA+L D A + A R M + V P+ +TYN++++ L G A
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M G P+V TY+ +V + G+++ A + MM+D G+ P T + N
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRA-GEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228
Query: 299 RLVGLGFLDIIEILADKMER 318
+ G ++ + D+M R
Sbjct: 229 GMCKAGKMEDARKVFDEMMR 248
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 15/355 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + L++ALC K + + + P + + +V L G
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A + D M + D++ + +L++ C +DEA + M G P+ FSY+
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ + + + M R L+PN TYN +I LC ++++A L EM+ G
Sbjct: 360 LINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACG 419
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +L Y C ++ A+ L+ + N+ PD Y +V+ + R G + A
Sbjct: 420 QIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDAR 479
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE------GIPPYSSTV 293
+++ ++ +G P+V TY++M HGLC K+G L+EA K F M +DE G + T
Sbjct: 480 DLFSNLSSKGLKPNVWTYNIMTHGLC-KRGLLDEATKLF-MEMDENACSADGCTYNTITQ 537
Query: 294 EMLRNRLVGLGFLDIIEILADKMERSTSCTIQ--ELANAMRGKTGFRKSRSEETE 346
LRN I++L + + R SC + L M G +S + + E
Sbjct: 538 GFLRNNETSRA----IQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLE 588
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V Y+ L+ GL G
Sbjct: 135 ILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGH 194
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C D++ + +L+ ++CK +A + EM + G P+ + +
Sbjct: 195 TSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNS 254
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A C + V +L+ M ++PN + ++ LCK V +A+ ++D M + G
Sbjct: 255 LVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSG 314
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y A++ HC R+E++ A+++ M + P+ +YN ++ ++ R D+A
Sbjct: 315 VEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAM 374
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M ++ P+ TY+ ++HGLC G+L++A F MV G P T +L +
Sbjct: 375 YLFEEMCRQKLIPNTVTYNTLIHGLC-HVGRLQDAIALFREMVACGQIPDLVTYRILLDY 433
Query: 300 LVGLGFLDIIEILADKMERS 319
L LD L +E S
Sbjct: 434 LCKNCHLDKAMALLKAIEGS 453
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M+ PSI D ++L ++ K K P V T ++L+ +
Sbjct: 65 MLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNR 124
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A + ++L+ C D + +L++ +C G I EA + +M G +PD Y+
Sbjct: 125 VNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYAT 184
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + R+L SM++ N P+V Y +I LCK+ + +A+ L EMI +G
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKG 244
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ + N+++ C+ E L+ M +MP+ + V+ L + G +A
Sbjct: 245 ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAH 304
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+V + M + G P V TY+ ++ G C + +++EA K F+MMV +G P
Sbjct: 305 DVVDMMFQSGVEPDVVTYTALIDGHCLRS-EMDEAVKVFDMMVHKGCAP 352
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 1/281 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G++P + L+ C R + A + FD H+ P V +Y+ L+ G +
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+EM +K + + +N+L+ +C G + +A + REM + G PD +Y I
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + +L +++ NL P++ Y +I +C+ ++E+A L + +G
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ W+YN + C R ++ A +L M + D TYN + + +R RA
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAI 549
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++ E M RGF VST +++V L EA K +M
Sbjct: 550 QLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ ML P I+ +L ++ K + R+M S G + ++ ++
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N ++ F VL + + P+ ++ +I+ LC ++ EA L D+MI G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C + A+RL+ M K N PD Y ++ L + + +A
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +G P++ T + +V+ LC G+ + MVD I P + ++ + +
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALC-NLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA 293
Query: 300 LVGLGFLDIIEILADKMERS 319
L G + + D M +S
Sbjct: 294 LCKEGMVAQAHDVVDMMFQS 313
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 1/250 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P L HN +D+A M + P ++ + + +
Sbjct: 30 MLSIPSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKR 89
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+V + M + + NV+T N +I C +V A+ +L ++++ G PD S+
Sbjct: 90 YSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTT 149
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E PD Y ++ L + G A + SMEK
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P V Y ++H LCK + + +A F M+ +GI P T L L LG +
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQ-TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHV 268
Query: 310 EILADKMERS 319
L ++M S
Sbjct: 269 NTLLNEMVDS 278
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 160/317 (50%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ KP L+ LC+ + A +FFD+ K +F P V Y+ LVRG G +
Sbjct: 155 MEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 214
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA ++F EM ++ ++ +++++C+ G I AH + EM G +P++ +Y+
Sbjct: 215 SEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSL 274
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR P+ TYN +I CK+E +E+A +++ M ++G
Sbjct: 275 MRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGC 334
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N + +VN A R+ +M + N + TYN ++K+ V D +
Sbjct: 335 APNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLK 394
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ M++ P+V+TY V++ C G A K+F M+DE + P +M+ +
Sbjct: 395 LKTEMDENKIEPNVNTYKVLITMYC-GMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQ 453
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 454 LRKAGQLKKHEELVEKM 470
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 4/288 (1%)
Query: 32 FFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
FF+ A ++ F + + Y+ +V G V A D M R V + L+
Sbjct: 80 FFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRY 139
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
+AG EA M +PD ++SI I C DS+K P+V
Sbjct: 140 VRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKD-KFEPDV 198
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
Y ++R C+ + EA ++ EM G P+ ++Y+ ++ C ++ A +
Sbjct: 199 IVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAE 258
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M P+ TYN ++++ V+ GR ++ +V+ M++ G P TY+ ++ CK +
Sbjct: 259 MLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDEN 318
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
LE+A K +M +G P +ST L + LG ++ + KM+
Sbjct: 319 -LEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMK 365
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
+D MK N+ V T+ ++R+ + EA + M + PD+ +++ +++ C
Sbjct: 117 IDLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCR 176
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ A + K+ PD Y +++ R G A V+ M+ G P+V T
Sbjct: 177 ERRASQAQEFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYT 235
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
YS+++ LC+ G++ A F M+D G P S T L V G + + + ++M
Sbjct: 236 YSIVIDSLCRC-GQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQM 294
Query: 317 ER 318
+R
Sbjct: 295 KR 296
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 4/320 (1%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
V P L+ LL A CK V+ A F K + +TYSIL G +
Sbjct: 213 VRMRTPPETDALNVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGWCRARDPK 272
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYS 118
A K+ +EM++ K + +N+ +++ C AG + EA + MR+ G+ P A +YS
Sbjct: 273 RAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYS 332
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I A +A + F ++ M++ +P+V TY +I + +K++ AY +LDEM +
Sbjct: 333 IMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKA 392
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C + + AL L RM + + P HTYNM++ + + DRA
Sbjct: 393 GFPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRA 452
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+W M+KRG + +V TY M+ GL G+ E+A + +++ G+ + +
Sbjct: 453 INIWIEMDKRGCHRAVDTYETMIDGLF-DSGRTEDATALLDEVINRGMKLSYKKFDAIML 511
Query: 299 RLVGLGFLDIIEILADKMER 318
RL +G L I L++ M R
Sbjct: 512 RLSAVGNLGAIHRLSEHMRR 531
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS--IGAEPDAFS 116
L+ RKL + R + P + A N LL+A CK G + EA + ++ +G +A +
Sbjct: 201 LTHLRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVREAEVVFSRVKRKLLG---NAET 257
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YSI +C A D +VL+ M + P FTYN I C V EA L + M
Sbjct: 258 YSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMR 317
Query: 177 ERG---ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
G ++P +Y+ ++A ++ LI+ M K MPD TY +++ ++ V
Sbjct: 318 TEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVD 377
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D A V + M K GF P + TY+ + LC + K ++A + E M++ P T
Sbjct: 378 KLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQ-KADDALELCERMIEAHCEPSVHTY 436
Query: 294 EML 296
ML
Sbjct: 437 NML 439
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 174/339 (51%), Gaps = 30/339 (8%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P++ + ++ LCKRK V A F + + V TYS ++ G VG+L+EA
Sbjct: 200 EPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALG 259
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------------- 102
+EM+ + D+ +N+L++A+ K G + EA +L
Sbjct: 260 FLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYA 319
Query: 103 ----REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ +G PD +SY+I I+ C+ + + M + N+VPN TYN +I
Sbjct: 320 KHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDG 379
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LCK+ ++ A+ L+DEM +RG + + +YN+++ C +++ A+ LI +M + + PD
Sbjct: 380 LCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPD 439
Query: 219 RHTYNMVLK-LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+T N++L LL + R A +++ + +G++P+V TY+++++G C K+G L+EA
Sbjct: 440 MYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHC-KEGLLDEAYAL 498
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
M D G P + T +++ L+ G D E L +M
Sbjct: 499 QSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 29/332 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++++G +P L L+ LC + VK A F D F +Y L+ G+ +GE
Sbjct: 124 ILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGE 183
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L + R +++ +N++++ +CK + EA + EM G + +YS
Sbjct: 184 TRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSA 243
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER- 178
IH FC + L+ M + P+V+ YN ++ L K KV+EA +L +++
Sbjct: 244 IIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTC 303
Query: 179 --------------------------GANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
G PD WSYN ++ C V AL L M +
Sbjct: 304 LKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQ 363
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+N++P+ TYN ++ L + GR A ++ + M RG + +V TY+ +++GLC K G+L+
Sbjct: 364 KNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLC-KNGQLD 422
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+A M D+GI P T+ +L + L+ G
Sbjct: 423 KAIALINKMKDQGIQPDMYTLNILLHGLLCKG 454
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 135/279 (48%), Gaps = 29/279 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHAL-------------------CKRKHVKVAHQFFDN-AKHEF 40
MV I P +Y + L+ AL C + +V + D AKH F
Sbjct: 264 MVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVF 323
Query: 41 --------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA 92
TP V +Y+I++ L + + EA L+ EM ++ + + +NSL++ +CK+
Sbjct: 324 NAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G I A ++ EM G + +Y+ I+ C+ + +++ MK + P+++T
Sbjct: 384 GRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTL 443
Query: 153 NCIIRKL-CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
N ++ L CK ++++ A L +++++G +P+ ++YN I+ HC ++ A L ++M
Sbjct: 444 NILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
P+ T+ +++ L+ G D+A ++ M RG
Sbjct: 504 DSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P ++ + +++ LCK K V+ A + + P TY+ L+ GL G +S A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L DEM +R +++ +NSL+ +CK G +D+A ++ +M+ G +PD ++ +I +H
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449
Query: 124 F-CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + + + PNV+TYN II CK ++EAY L +M + G +P
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ ++ I+ ++ E + A +L+ M ++
Sbjct: 510 NAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F ML + I+ N +L++ K + + R + +PD F+ +I I+ FC
Sbjct: 51 FHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCH 110
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I+ F VL + ++ P+ T +I+ LC +V++A D+++ +G D+ S
Sbjct: 111 LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVS 170
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C E A++L+ R+ P+ YN ++ L + A ++ M
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMS 230
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+G +V TYS ++HG C GKL EA + MV + I P Y++ V+ L
Sbjct: 231 VKGISANVVTYSAIIHGFC-IVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 33/356 (9%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P I +++L + K KH + P T +IL+ +G+++ A +
Sbjct: 61 PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D + +L++ +C G + +A ++ + G D SY I+ C+
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + ++L + PNV YN II LCK + V EA L EM +G + + +
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+AI+ C ++ AL + M + + PD + YN ++ L + G+ A V +
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300
Query: 247 KR---------------------------GFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
K G P V +Y++M++ LCK K ++EEA ++
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIK-RVEEALNLYK 359
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFL----DIIEILADKMERSTSCTIQELANAM 331
M + + P + T L + L G + D+I+ + D+ + T L N +
Sbjct: 360 EMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGL 415
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
N+D+A M + P ++ + +F + +V + ++ + P+ FT N
Sbjct: 43 NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I C ++ A+ +L ++++ G PD + ++ C + +V AL ++ +
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ 162
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
D+ +Y ++ + ++G A ++ ++ R P+V Y+ ++ LCK+K + E
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK-LVSE 221
Query: 274 ACKYFEMMVDEGIPP----YSSTVE---MLRNRLVGLGFLD 307
AC F M +GI YS+ + ++ LGFL+
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLN 262
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 144/292 (49%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P + + LL C K + A H D+ P V +Y+ ++ G
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ +A LF EM++R +++ + ++++ +CKA +D A G+ ++M G +PD +
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + V R+L+ M + L P+ +TY ++ LC N + EA D MI
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G P+ Y ++ + + ++ L+ M + + PD H +N++ + D
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A ++ M+++G P V + ++ LC K G++++A F M++EG+ P
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALC-KLGRVDDAVLKFNQMMNEGVAP 446
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G+KP Y LL+ LC + A FFD+ + P V Y IL+ G G
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSE L + M+E D N + A K IDEA + +M+ G PD ++
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGA 418
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + M + PN+F +N ++ LC +K E+A + EM+ +G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +N IL C + +V A RLI M + PD +Y ++ VGR D A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M G P TY+ ++HG C + G++++A F M+ GI P
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYC-RAGRIDDAYGVFREMLRNGITP 586
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 158/332 (47%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P + + L+ ALCK V A F+ +E P + ++ LV GL V +
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A++ + EML + D++ N++L +C G + +A ++ M +G PD SY+
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C I + LD M L P+ +TYN ++ C+ ++++AY + EM+ G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y+ IL + A L M + YN++L L + D A
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S+ + F ++T+++M+ G K G+ E+A F + G+ P T ++
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMI-GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAEN 702
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L+ G+L+ + L ME+S + + NA+
Sbjct: 703 LIEEGYLEEFDDLFSAMEKSGTTPNSRMLNAL 734
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 14/303 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ GI+P + + +L LC + V A + D + T P V +Y+ L+ G VG
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGR 533
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K D ML D +N+LL C+AG ID+A+G+ REM G P +YS
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 120 FIHA------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+H F EA +++ ++ S K++N ++ YN I+ L KN V+EA++L
Sbjct: 594 ILHGLFTTRRFSEAKELY--LNMITSGKQWN----IWIYNIILNGLSKNNCVDEAFKLFQ 647
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ + + ++N ++ A+ L ++ ++PD TY ++ + L+ G
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ +++ +MEK G P+ + +V L +G + A Y + ++ +ST
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL-HRGDITRAGAYLSKLDEKNFSLEASTT 766
Query: 294 EML 296
ML
Sbjct: 767 AML 769
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 40/287 (13%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + TYSIL+ +G L F +L+ V+ + N LL+ +C A + EA
Sbjct: 91 TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150
Query: 101 ML-REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM------------------- 140
+L + M +G PD SY+ + FC +L M
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210
Query: 141 ----------KRYNLV---------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
K YNL PNV TY +I LCK + V+ A + +MI++G
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN ++ + + +R++ M+ + PD +TY +L L GR A
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++SM ++G P+V+ Y +++HG KG L E +MV+ G+ P
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGY-ATKGALSEMHDLLNLMVENGLSP 376
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN-----------IDEAHGMLR 103
G +G L +A KLFD +L P I+A N LL A+ + + + M+R
Sbjct: 26 GSLG-LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR 84
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E +I PD +YSI I FC + F + + N N +++ LC +
Sbjct: 85 EC-TIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAK 143
Query: 164 KVEEAYQ-LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE---NVMPDR 219
++ EA L+ M E G PD SYN +L C+ AL L+ M + P+
Sbjct: 144 RLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNV 203
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+Y V+ G+ D+A ++ M RG P+V TY+ ++ GLCK + ++ A F+
Sbjct: 204 VSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ-VVDRAEGVFQ 262
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLG 304
M+D+G+ P + T L + + +G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIG 287
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP + + LLH C+ + A+ F + ++ TP V TYS ++ GL
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ +I +N +L + K +DEA + + + S + + +++I
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A ++ + ++ Y LVP+VFTY I L + +EE L M + G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ NA++ R ++ A ++++ ++N + T M++ LL R
Sbjct: 724 TTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSR 775
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVG 58
M +G +P + + L LC+ V A + D + T P V TY+ LV
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWR 363
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A +L +EM ++ ++ HN +++++CK G ++EA G L ++ G PD +Y+
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYN 423
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I A+C+A ++ F ++D M L + FT N ++ LCK ++ E+A +LL +R
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE SY ++A + ALRL +M + ++P TYN ++K L R+ R A
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ ++G P +TY++++H C K+G LE A ++ MV+ P T L N
Sbjct: 544 IDKLNEFVEKGLVPDETTYNIIIHAYC-KEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 299 RLVGLGFLD 307
L G LD
Sbjct: 603 GLCLHGKLD 611
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 177/337 (52%), Gaps = 8/337 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP++ + ++ +LCK ++ A + A+ P V TY+ L+ G
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L DEM+ + +D N++L +CK ++A +L G PD SY
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + R+ D M L+P++ TYN +I+ LC+ E+++EA L+E +E+G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +YN I+ +C ++ A R +M + + PD T N ++ L G+ D+A
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ES ++G V TY+ ++ +C K G ++ A +F+ M +G+ P + T ++ +
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMC-KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673
Query: 300 LVGLG----FLDIIEILAD--KMERSTSCTIQELANA 330
L G +++ LAD K+ +S +C + + ++A
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSA 710
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 15/291 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----EFTPTVKTYSILVRGLGDVGEL 60
G++PS+ + +L AL R + D + P T+++LV G L
Sbjct: 166 GVRPSLQAANAVLSAL-SRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A M D + +N+LL A C+ G + EA +L M+ G P +Y+
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG- 179
+ AF I +V++SM Y P++ TYN + LC+ KV+EA++L DEM G
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGT 344
Query: 180 ANPDEWSYN----AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
A PD +YN A + C + ALRL+ M + V P T+N+V+K L + G+
Sbjct: 345 ALPDVVTYNTLVDACFKWRCS----SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ A E + + G P V TY+ ++ C K G + +A + MV +G+
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYC-KAGNVAKAFTLMDEMVGKGL 450
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 2/276 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E + PSI + L+ LC+ + +K A + + + P TY+I++ G+
Sbjct: 515 MIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGD 574
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + ++M+E D++ N+L+ +C G +D+A + G + D +Y+
Sbjct: 575 LENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNT 634
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ D+ + D M+ L P+ FTYN ++ L + + EEA+ +L ++ + G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR-HTYNMVLKLLVRVGRFDRA 238
++ + D A+V + E + TY L L G+ A
Sbjct: 695 KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA 754
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V + M ++G STY ++ GL K++ + A
Sbjct: 755 KAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQTHA 790
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 168/329 (51%), Gaps = 19/329 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------DNAKHEFTPTVKTYSILVR 52
M++ G+ P++ ++++LC +V++A F D H FTP L++
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP-------LIK 322
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G G+L EA L+ M++ C +++A+N+L+ +C G+++EA + +M+ G P
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ +YSI I F ++ D+ + M + PNV TY C++ LCKN ++A L+
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
++M G P+ ++N + C V A++L+ RM +P+ TYN +L L R+
Sbjct: 443 EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+++ A +++ +E R P++ TY+ +++G + G + EA + F + G P S T
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF-SRAGMMGEALQLFGKALVRGTAPDSIT 561
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERSTS 321
+ + G ++I A +ER +S
Sbjct: 562 YNTMIHAYCKQG---KVKIAAQLVERVSS 587
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 7/315 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
EFG KP++ + LL AL ++ + + N K + P V TY+IL++ L +
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A KLF EM + CP D + + +++ ++CKAG ID+A + + P Y+ I
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALI 251
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ I ++L M + PNV +Y+CII LC + VE A+ L +M RG +
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ ++ ++ R ++ AL L M ++ P+ YN ++ L G + A +V
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M++ G P+V+TYS+++ G K G L A + + M+ G P T + + L
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGF-AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430
Query: 302 GLGFLDIIEILADKM 316
D L +KM
Sbjct: 431 KNSMFDQANSLVEKM 445
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNI 95
+ F T TY +++ LG E+ + + +M C D+ ++ + G+
Sbjct: 68 NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI--CIINGYKRVGSA 125
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
++A M + G +P Y+ + A N + + +MK+ L+PNVFTYN +
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWS----------------------------- 186
++ LCKN++V+ A++L EM +G PD +
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVP 245
Query: 187 -YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
YNA++ C + +A++L+ M V P+ +Y+ ++ L G + A ++ M
Sbjct: 246 VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
RG ++ T++ ++ G C +GKL EA +++M+ +G P L + L G
Sbjct: 306 FLRGCDANIHTFTPLIKG-CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364
Query: 306 LDIIEILADKMERS 319
L+ + D+M+RS
Sbjct: 365 LEEALQVCDQMQRS 378
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ + + LC V+ A + + + H P + TY+ L+ L + + EA
Sbjct: 449 GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF E+ R +++ +N++L +AG + EA + + G PD+ +Y+ IHA
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 124 FCEANDIHSVFRVLD---SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+C+ + ++++ SMK ++ P++ TY +I C +EEA LD+ I +G
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626
Query: 181 NPDEWSYNAIL 191
P+ ++NA++
Sbjct: 627 CPNFATWNALV 637
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I ++LL AL + + A F + P + TY+ ++ G G + EA
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIH 122
+LF + L R D + +N+++ A CK G + A ++ + S+ PD +Y+ I
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C +I LD + PN T+N ++R + +LD+++ +G
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 152/297 (51%), Gaps = 6/297 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+IY + L++ + + + F + P V +Y+ L+ G GE+ +A L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M E+ +++ ++SL+ +CK +D+A +LR+M G P+ +Y+ IH +
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ RV M LVP+V N + LCK+ +++EA + D M+ +G PD S
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y A+L + + L M E V+PDRH +N ++ R+G D++ ++E M
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRNR 299
K+G P + T+S ++ C+ G+L++A + F M+D G+PP YS ++ NR
Sbjct: 356 KQGVNPDIITFSTVISAFCRL-GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 7/305 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
M++ G+ P L+ C R+ + A + + +K P +K ++ ++ L G
Sbjct: 389 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 448
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++E + + D ++ +++ NSL++ C GN+ EA G+L M S+G EPD ++Y+
Sbjct: 449 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 508
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C+ I + M + +YN I+ L + + A ++ EMIE
Sbjct: 509 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 568
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +Y +L C + A L+ ++ NV D T+N+V++ + +VGR A
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS----STVE 294
E++ ++ G P++ TY VM+ L K++ E+A F M P S +
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEE-SFEDADNLFSSMEKSSCTPDSRILNEIIR 687
Query: 295 MLRNR 299
ML N+
Sbjct: 688 MLLNK 692
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P + + L++A + + K F D K P + T+S ++ +G
Sbjct: 319 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 378
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS-YS 118
L +A + F+ M++ P D ++ L++ C ++ +A ++ +M S G P ++
Sbjct: 379 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 438
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + V+D + PN+ T+N ++ C ++EA LLD M
Sbjct: 439 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 498
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++YN ++ +C ++ AL L M + V +YN++L L + R A
Sbjct: 499 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 558
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK 266
E++ M + G S+ TY+ ++ GLC+
Sbjct: 559 KEMFHEMIESGMAVSIHTYATVLGGLCR 586
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 4/248 (1%)
Query: 63 ARKLFDEMLERKCP---VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +LF M CP I +N L+ +A D + + G PD FSY+
Sbjct: 99 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M+ ++PNV TY+ +I LCK +++++A ++L +M+ G
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ + ++R+ M+ ++PD N + L + GR A
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++SM +G P V +Y ++HG G + F +MV EG+ P L N
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYA-TAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 337
Query: 300 LVGLGFLD 307
LG +D
Sbjct: 338 YARLGMMD 345
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 1/236 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G++P IY + L+ CK + A F + H+ T T +Y+I++ GL
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+++F EM+E V I + ++L +C+ DEA+ +L ++ S+ + D +++I
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ Y LVP + TY +I L K E E+A L M +
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 674
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
PD N I+ ++ EV A ++++ K+ ++P+ T ++++ L G++
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKY 730
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 38/313 (12%)
Query: 1 MVEFGIKPS-IYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVG 58
M+ GI P I +++ LCK V D H P + T++ LV G VG
Sbjct: 424 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 483
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA L D M DI +N+L++ CK G ID+A + R+M + SY+
Sbjct: 484 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 543
Query: 119 IFIHAFCEAN-------------------DIHSVFRVLDSMKRYNLVP------------ 147
I +H +A IH+ VL + R N
Sbjct: 544 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM 603
Query: 148 ----NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++ T+N +IR + K + +EA +L + G P +Y ++ A
Sbjct: 604 NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDA 663
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L + M K + PD N ++++L+ G +A ++K+G P +T S++++
Sbjct: 664 DNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIY- 722
Query: 264 LCKKKGKLEEACK 276
L GK E K
Sbjct: 723 LFSVNGKYREYIK 735
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 7/178 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGD 56
M+E G+ SI+ +L LC+ A+ + F+ VK T++I++R +
Sbjct: 565 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL---FSMNVKFDILTFNIVIRAMFK 621
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG EA++LF + IL + ++ + K + ++A + M PD+
Sbjct: 622 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ I ++ L + + ++P T + +I N K E +LL E
Sbjct: 682 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ +K I + ++ A+ K + A + F + + PT+ TY +++ L
Sbjct: 600 LFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEES 659
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF M + C D N ++ + G + +A L ++ G P+A + S+
Sbjct: 660 FEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSL 719
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
I+ F ++L R+ L NCI
Sbjct: 720 LIYLFSVNGKYREYIKLLPEKYRF-LREQAAVDNCI 754
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 153/308 (49%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G +P + L+ +LCK + V A F K + +PTV +Y+ L++GL
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + +EM DI+ + L++ CK GN+ EA G+L+ M +G EP+ +Y+
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + ++ ++ D M P+VF+Y+ +I C ++++EA QL +EMI +G
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY ++ C ++ A L M +PD TY+++L+ + G +A
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +M+ P++ Y++++ +C K G L A K F + G+ P + N
Sbjct: 462 RLFRAMQGTYLKPNLVMYTILIDSMC-KSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520
Query: 300 LVGLGFLD 307
L G LD
Sbjct: 521 LCKEGLLD 528
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 37/338 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+ L++ C +HV + K PT+ T++ L+ GL GE ++A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFD+M+ R C D+ + +++ +CK G A G++++M +G +PD +YS I +
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDS 240
Query: 124 FC------EANDIHSVFR-----------------------------VLDSMKRYNLVPN 148
C EA DI S + +L+ M N++P+
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ T++ +I CK V EA +L M E G P+ +YN+++ + + EV A +L
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M PD +Y++++ V R D A +++ M +G P+ +Y+ ++H C +
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC-QL 419
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
GKL EA + F+ M G P T +L G+L
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYL 457
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G++P+I L++ LCK A + FD+ P V TY+ ++ GL +GE
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGE 211
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCK---------------AGNID-------- 96
+ A L +M E C D++ +++L++++CK A I
Sbjct: 212 TAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271
Query: 97 ------------EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
EA ML EM S+ PD ++S+ I FC+ ++ VL +M
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PNV TYN ++ +V EA +L D MI RG PD +SY+ ++ +C ++ A
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+L M + + P+ +Y ++ ++G+ A E+++ M G+ P + TYSV++ G
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K+G L +A + F M + P
Sbjct: 452 C-KQGYLGKAFRLFRAMQGTYLKP 474
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M I P I L+ CK +V A + P V TY+ L+ G E
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD M+ R C D+ +++ L+ C IDEA + EM G P+ SY+
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHAFC+ + + M +P++ TY+ ++ CK + +A++L M
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ C +N A +L + + + PD Y ++ L + G D A
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E + ME+ G P+ +Y+V++ G + K + A + M D+G
Sbjct: 532 EAFRKMEEDGCPPNEFSYNVIIRGFLQHKDE-SRAVQLIGEMRDKG 576
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P++ + L+H + V A + FD P V +YSIL+ G V
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++LF+EM+ + + +++ +L+ A C+ G + EA + ++M + G PD +YS+
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + FR+ +M+ L PN+ Y +I +CK+ + A +L E+ G
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y I+ C ++ AL +M ++ P+ +YN++++ ++ RA
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 566
Query: 240 EVWESMEKRGF 250
++ M +GF
Sbjct: 567 QLIGEMRDKGF 577
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-DEAHGMLREMRSIGAEPDAFSYS 118
+ +A F+ ML RK I+ N LL A+ + D + ++M G P+ + +
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + F VL + + L P + T+ +I LCK + +A +L D+M+ R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++Y I+ C E A LI +M + PD TY+ ++ L + + A
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M+ +G P+V +Y+ ++ GLC + +EA M I P T +L
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFS-RWKEASAMLNEMTSLNIMPDIVTFSLL 307
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 157/293 (53%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + L+ + + K V+ F++ K + F P V++YSIL+ GL G+ E
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 585
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F M ++ +D A+N++++ CK+G +D+A+ +L EM+ P +Y I
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + + + + K + NV Y+ +I K +++EAY +L+EM+++G P+
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N+++ E+N AL M + P+ +TY++++ L RV ++++A W+
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+K+G P+V TY+ M+ GL K G + +AC FE G P +++ L
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLA-KVGNITDACSLFERFKANGGTPDAASFNAL 817
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 38/317 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+KP ++ LCK + A + F + E P Y+ ++ G G G+ A
Sbjct: 282 GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENA 341
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL D++ ER C +++ NS+L + K +DEA + M+ AEP++ +Y+I I
Sbjct: 342 YKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDM 400
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A + + + D M+ L PN+ T N ++ +LCK +K E AY++ + +RG NP+
Sbjct: 401 LCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPN 460
Query: 184 EWSYNAILAYHCDRAEVNMALRL-----------------------------------IT 208
+Y +++ + V+ A RL
Sbjct: 461 SVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFK 520
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD N + + + G ++ ++E ++ GF P V +YS+++HGL K
Sbjct: 521 EMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL-TKA 579
Query: 269 GKLEEACKYFEMMVDEG 285
G+ E F M +G
Sbjct: 580 GQARETSSIFHAMKQQG 596
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V ++ LVR L G + A L DE+ DI+ +N ++ KAGN+D A
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E++S G +PD SY+ I C+A + + M+ VP + YN +I
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+ E AY+LLD++ ERG P S+N+IL + +V+ AL L M K++ P+ TYN
Sbjct: 337 QFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYN 395
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ +L G+ + A + + ME G +P++ T ++MV LCK K K E A + FE
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAK-KFEPAYEMFETASQ 454
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLD 307
G P S T L + L G +D
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVD 478
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 1/270 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
+G P + L+H L K + F K + F + Y+ +V G G+L +
Sbjct: 560 YGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDK 619
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ +EM ++ P + + S+++ + K +DEA+ + E +S G E + YS I
Sbjct: 620 AYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLID 679
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
F + I + +L+ M + L PNV+T+N ++ L K E++ EA M E +P
Sbjct: 680 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 739
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ ++Y+ ++ C + N A M K+ ++P+ TY ++ L +VG A ++
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
E + G P ++++ ++ G+ +E
Sbjct: 800 ERFKANGGTPDAASFNALIEGMSHANRAIE 829
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 1/305 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G PS+ + +L L K++ V A F+ K + P TY+I++ L G++ E
Sbjct: 350 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEE 409
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + DEM ++L N +++ +CKA + A+ M G P++ +Y I
Sbjct: 410 AYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLID 469
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ ++ +R+ ++M N Y +IR + + E+ +++ EM RG P
Sbjct: 470 GLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQP 529
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D N + +V + + +PD +Y++++ L + G+ + ++
Sbjct: 530 DLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIF 589
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+M+++GF Y+ +V G C K GKL++A + E M + +PP +T + + L
Sbjct: 590 HAMKQQGFALDARAYNAVVDGFC-KSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAK 648
Query: 303 LGFLD 307
+ LD
Sbjct: 649 IDRLD 653
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ ++ CK + A++ + K PTV TY ++ GL + L EA LF+E
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ ++++ ++SL++ K G IDEA+ +L EM G P+ ++++ + A +A +I+
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINE 724
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
SMK PN +TY+ +I LC+ +K +A+ EM ++G P+ +Y ++A
Sbjct: 725 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIA 784
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ A L R PD ++N +++ + R A V+E +G
Sbjct: 785 GLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
LV L L +A ++ M K A+ L+ AM +A + A +LR+M+ +G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
E ++ + A + ++D +K L P++ YN I K V+ A+
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ E+ +G PD+ SY +++ C ++ A L +M E +P + YN ++
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
G+F+ A ++ + +++RG PSV +++ ++ L KK+ K++EA FE M + P
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR-KVDEALTLFEAMKKDA-EPN 390
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERS 319
SST ++ + L G ++ ++ D+ME +
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHA 420
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+ P++Y + L+ AL K + + A F + K + +P TYSIL+ GL V +
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + EM ++ +++ + +++ + K GNI +A + ++ G PDA S++
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
I AN + V + + NV ++ L K E +E+A
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 127 ANDIHSVFRVLDSMKRYNL-VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
++D+ ++ +VL+ M VPN + ++ L + ++++A +++ M P
Sbjct: 125 SHDLAAMEKVLEEMSVLGYGVPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFS 183
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ + + AL L+ +M + + +++ L R GR + A + + +
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ P + Y+V + K G ++ A K+F + +G+ P + + L G
Sbjct: 244 KGSCLEPDIVLYNVCIDCF-GKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGR 302
Query: 306 LDIIEILADKM--ERSTSCT 323
L E L +M ER+ C
Sbjct: 303 LSEAEELFGQMETERAVPCA 322
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M K D++ N++++++CK ++D+A + +EM + G P+ +YS
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M + PN+ T+N +I K K EA +L D+MI+R
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C ++ A ++ M ++ PD TYN ++K + R + T
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ GL G + A K F+ MV +G+PP T +L +
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + D M++S
Sbjct: 405 LCNNGKLEKALEVFDYMQKS 424
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ +LCK +HV A F + + P V TYS L+ L G S+A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+E+K +++ N+L++A K G EA + +M +PD F+Y+ I+ F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P++ TYN +I+ CK+++VE+ +L EM RG D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + A ++ +M + V PD TY+++L L G+ ++A EV++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+K + Y+ M+ G+C K GK+++ F + +G+ P
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMC-KAGKVDDGWDLFCSLSLKGVKP 463
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A Q D + + P + T++ L+ G+ EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL D+M++R DI +NSL+ C +D+A M M S PD +Y+ I
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M LV + TY +I+ L + + A ++ +M+ G PD
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ ++ AL + M K + D + Y +++ + + G+ D +++
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ GLC K+ L+EA + M ++G P S T L
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P I+ + L++ C + A Q F+ + P + TY+ L++G
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R D + + +L++ + G+ D A + ++M S G PD +YSI
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + V D M++ + +++ Y +I +CK KV++ + L + +G
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C + + A L+ +M ++ +PD TYN +++ +R G +
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ M F ST ++ + L G+L+++
Sbjct: 521 ELIREMRSCRFVGDASTIGLVANML--HDGRLDKS 553
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M ++ +N L+ C+ I A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R ++++A L+ +M + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+N ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDM 246
Query: 282 VDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
+++ I P T L + V G F++ ++ D ++RS
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K A + D+ K P + TY+ L+ G
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+++F+ M+ + C D+ +N+L++ CK+ +++ + REM G D +Y+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I D + +V M + P++ TY+ ++ LC N K+E+A ++ D M +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + Y ++ C +V+ L ++ + V P+ TYN ++ L A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ + M++ G P TY+ ++
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLI 507
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P++F +N ++ + K +K + L ++M G + + ++YN ++ C R+++++AL
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ +M K P T + +L R A + + M + G+ P T++ ++HGL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
K EA + MV G P T ++ N L G +D+ L +KME +
Sbjct: 127 LHN-KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M++ P + +N +L+ + ++ + L +M + + + +TYN+++ R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A + M K G+ PS+ T S +++G C K ++ +A + MV+ G P + T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFT 119
Query: 295 ML 296
L
Sbjct: 120 TL 121
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 10/336 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ PS+ + L+ CK V+ A + D + P +TY+ L+ G
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +MLE + ++ +NSL+ CK G +D A+ +L M G PD ++YS+
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ I + +S+K + N Y +I CK K+++A LLD M+
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ C +V AL L+ M ++ + TY +++ +++ G FD A
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M G+ P V Y+ +H C +G ++EA MM + G+ P + T ++ +
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFC-TRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433
Query: 300 LVGLGFLD--------IIEILADKMERSTSCTIQEL 327
GLG L+ + + D + SC I+ L
Sbjct: 434 YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 147/287 (51%), Gaps = 2/287 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+H LC+ V F + + PTV+TY+++V L + G EA LF EM ER
Sbjct: 44 NLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRER 103
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C +I + ++ AMCK ++E +L EM G P +Y+ I +C+ + +
Sbjct: 104 GCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAA 163
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+LD M + PN TYN +I C+ + V A LL +M+E P +YN+++
Sbjct: 164 QEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG 223
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A RL+ M + V+PD+ TY++ + L + GR + A ++ S++++G +
Sbjct: 224 QCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN 283
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
Y+ ++ G C K GK+++A + M+ E P SST L + L
Sbjct: 284 EVIYTALIDGYC-KAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 140/271 (51%), Gaps = 1/271 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+Y+ L+ GL +VG + E +F +M E C + + ++ A+ ++G EA + EM
Sbjct: 41 SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R G EP+ +Y++ I+A C+ + R+LD M LVP+V TYN +I CK V
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E A ++LD M NP+E +YN ++ C + V+ A+ L+++M + + P TYN +
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ ++G D A + M + G P TYSV + LC KKG++EEA F + ++G
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC-KKGRIEEANVLFNSLKEKG 279
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
I L + G +D L D+M
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRM 310
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 162/351 (46%), Gaps = 30/351 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E + PS+ + L+H CK ++ A++ + ++ P TYS+ + L G
Sbjct: 205 MLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGR 264
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+ + E+ + + + +L++ CKAG +D+A+ +L M + P++ +Y+
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + +++SM + L V TY +I + K + A+++LD+M+ G
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + Y A + C R + A +++ M + VMPD TY +V+ +G + A
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAF 444
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK----------------------------KKGKL 271
+V + M G PS TYS ++ L K K K
Sbjct: 445 DVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKF 504
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTS 321
E A + FE M++ G P +T L L +G L + + L D M ER S
Sbjct: 505 ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 10/277 (3%)
Query: 50 LVRGLGDVGELSEAR---------KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+V G +G L EA +F+ M ++ C + +++ +L+ +C+ G +DE
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ ++MR P +Y++ +HA E+ + M+ PN+ TY +I +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K K+EE ++LDEM+E+G P +YNA++ +C V A ++ M + P+
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN ++ R RA + M + PSV TY+ ++HG C K G L+ A + +
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC-KIGYLDSAYRLLNL 239
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
M + G+ P T + + L G ++ +L + ++
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 33/333 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+K ++ L+ A+ K AH+ D + P V Y+ + G
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGN 404
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + M ER D L + +++A G ++ A +L+ M G +P +YS
Sbjct: 405 IKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSC 464
Query: 120 FIH--------------AFCEA------NDIHSVFRVL---------DSMKRYNLVPNVF 150
I A C++ D+ V++++ + M + PN+
Sbjct: 465 LIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNIN 524
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY +I LCK ++ A +L D M ERG +P E YN++L C+ A+RL+ M
Sbjct: 525 TYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ +P + N++ L G ++A V+ ++ + G+ + +++ GL K
Sbjct: 585 MEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN--G 642
Query: 271 LEEAC-KYFEMMVDEGIPPYSSTVEMLRNRLVG 302
L + C + +M G + T ML L G
Sbjct: 643 LSDGCSELLGVMEARGCQIHPQTYRMLIEGLDG 675
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N V A+ + + M ++G +E SY ++ C+ V+ + + +M +++ P T
Sbjct: 17 NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y +++ L GR A ++ M +RG P++ TY+VM++ +CK+ KLEE + + M
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKET-KLEEGRRILDEM 135
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQE 326
V++G+ P T L + G ++ + + D M S SC E
Sbjct: 136 VEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM-HSNSCNPNE 179
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L L+ LC + V+ + F D F +Y L+ GL +GE
Sbjct: 113 ILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGE 172
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A K + + ++++ +N++++ +CK ++EA+ EM + G P+ +Y+
Sbjct: 173 TRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTT 232
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + F +L+ M N+ PNV+TY +I LCK KV+EA LL EM RG
Sbjct: 233 LIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRG 292
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y ++L C ++ A L +M + + P+++TY ++ L + GR A
Sbjct: 293 QPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQ 352
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++ + +G V TY+VM+ GLC K+G L+EA M D G P T E++
Sbjct: 353 KLFQDLLVKGCCIDVCTYNVMIGGLC-KEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRS 411
Query: 300 L 300
L
Sbjct: 412 L 412
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 125/239 (52%), Gaps = 3/239 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+ ++ LCK K V A+ F+ NA+ F P V TY+ L+ G G+L+ A L +EM+
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIF-PNVITYTTLIGGFCLAGQLTGAFSLLNEMI 254
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+ ++ + L++A+CK G + EA +L EM G D +Y+ + FC+ ++
Sbjct: 255 LKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLD 314
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ MK + + PN +TY +I LCK ++++A +L +++ +G D +YN ++
Sbjct: 315 KATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMI 374
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
C ++ AL + ++M +P+ T+ ++++ L + D+A ++ M +G
Sbjct: 375 GGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I + ++L L K KH A + + P + T +IL+ +G++S + +
Sbjct: 50 PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ + + +L++ +C G + ++ ++ + G + + SY ++ C+
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + L ++ + NV YN II LCK++ V EAY EM RG P+ +
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVIT 229
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C ++ A L+ M +N+ P+ +TY +++ L + G+ A + M
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMH 289
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
RG V TY+ ++ G CK + L++A F M + GI P T L + L
Sbjct: 290 YRGQPADVVTYTSLLDGFCKNQ-NLDKATALFMKMKEWGIQPNKYTYTALIDGL 342
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
LL+ LCK + A +F + T V Y+ ++ GL ++EA + EM R
Sbjct: 163 LLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARG 222
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ + +L+ C AG + A +L EM P+ ++Y+I I A C+ +
Sbjct: 223 IFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAK 282
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M +V TY ++ CKN+ +++A L +M E G P++++Y A++
Sbjct: 283 NLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGL 342
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A +L + + D TYN+++ L + G D A + ME G P+V
Sbjct: 343 CKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNV 402
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
T+ +++ L KK ++A K M+ +G+
Sbjct: 403 VTFEIIIRSLFKKDEN-DKAEKLLHEMIAKGL 433
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P++ L+ C + A + P V TY+IL+ L G++ EA
Sbjct: 222 GIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEA 281
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ L EM R P D++ + SLL+ CK N+D+A + +M+ G +P+ ++Y+ I
Sbjct: 282 KNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDG 341
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + ++ + +V TYN +I LCK ++EA + +M + G P+
Sbjct: 342 LCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPN 401
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
++ I+ + E + A +L+ M + ++ R+
Sbjct: 402 VVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLLRFRN 438
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F+ ML I+ +L + K + A + ++M G EP+ + +I
Sbjct: 33 VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + F VL + + PN T +++ LC +V+++ D+++ +G
Sbjct: 93 LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
++ SY +L C E A++ + + + + YN ++ L + + A
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M RG +P+V TY+ ++ G C G+L A M+ + I P T +L +
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFC-LAGQLTGAFSLLNEMILKNINPNVYTYAILIDA 271
Query: 300 L 300
L
Sbjct: 272 L 272
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + + ++ L + S A L +M + +++ N L+ C G + +
Sbjct: 49 TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L ++ +G +P+ + + + C ++ D + N +Y ++ LC
Sbjct: 109 VLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLC 168
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + A + L + + + YN I+ C VN A + M + P+
Sbjct: 169 KIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVI 228
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY ++ G+ A + M + P+V TY++++ LC K+GK++EA
Sbjct: 229 TYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC-KEGKVKEAKNLLAE 287
Query: 281 MVDEGIP 287
M G P
Sbjct: 288 MHYRGQP 294
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 152/297 (51%), Gaps = 6/297 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+IY + L++ + + + F + P V +Y+ L+ G GE+ +A L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M E+ +++ ++SL+ +CK +D+A +LR+M G P+ +Y+ IH +
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ RV M LVP+V N + LCK+ +++EA + D M+ +G PD S
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y A+L + + L M E V+PDRH +N ++ R+G D++ ++E M
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRNR 299
K+G P + T+S ++ C+ G+L++A + F M+D G+PP YS ++ NR
Sbjct: 427 KQGVNPDIITFSTVISAFCRL-GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 7/305 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
M++ G+ P L+ C R+ + A + + +K P +K ++ ++ L G
Sbjct: 460 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 519
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++E + + D ++ +++ NSL++ C GN+ EA G+L M S+G EPD ++Y+
Sbjct: 520 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 579
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C+ I + M + +YN I+ L + + A ++ EMIE
Sbjct: 580 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 639
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +Y +L C + A L+ ++ NV D T+N+V++ + +VGR A
Sbjct: 640 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 699
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS----STVE 294
E++ ++ G P++ TY VM+ L K++ E+A F M P S +
Sbjct: 700 KELFAAISTYGLVPTILTYRVMITNLIKEE-SFEDADNLFSSMEKSSCTPDSRILNEIIR 758
Query: 295 MLRNR 299
ML N+
Sbjct: 759 MLLNK 763
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P + + L++A + + K F D K P + T+S ++ +G
Sbjct: 390 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 449
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS-YS 118
L +A + F+ M++ P D ++ L++ C ++ +A ++ +M S G P ++
Sbjct: 450 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 509
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + V+D + PN+ T+N ++ C ++EA LLD M
Sbjct: 510 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 569
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++YN ++ +C ++ AL L M + V +YN++L L + R A
Sbjct: 570 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 629
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK 266
E++ M + G S+ TY+ ++ GLC+
Sbjct: 630 KEMFHEMIESGMAVSIHTYATVLGGLCR 657
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 4/248 (1%)
Query: 63 ARKLFDEMLERKCP---VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +LF M CP I +N L+ +A D + + G PD FSY+
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M+ ++PNV TY+ +I LCK +++++A ++L +M+ G
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ + ++R+ M+ ++PD N + L + GR A
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++SM +G P V +Y ++HG G + F +MV EG+ P L N
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYA-TAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 408
Query: 300 LVGLGFLD 307
LG +D
Sbjct: 409 YARLGMMD 416
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 1/236 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G++P IY + L+ CK + A F + H+ T T +Y+I++ GL
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+++F EM+E V I + ++L +C+ DEA+ +L ++ S+ + D +++I
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 685
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ Y LVP + TY +I L K E E+A L M +
Sbjct: 686 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS 745
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
PD N I+ ++ EV A ++++ K+ ++P+ T ++++ L G++
Sbjct: 746 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKY 801
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 38/313 (12%)
Query: 1 MVEFGIKPS-IYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVG 58
M+ GI P I +++ LCK V D H P + T++ LV G VG
Sbjct: 495 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 554
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA L D M DI +N+L++ CK G ID+A + R+M + SY+
Sbjct: 555 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 614
Query: 119 IFIHAFCEAN-------------------DIHSVFRVLDSMKRYNLVP------------ 147
I +H +A IH+ VL + R N
Sbjct: 615 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM 674
Query: 148 ----NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++ T+N +IR + K + +EA +L + G P +Y ++ A
Sbjct: 675 NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDA 734
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L + M K + PD N ++++L+ G +A ++K+G P +T S++++
Sbjct: 735 DNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIY- 793
Query: 264 LCKKKGKLEEACK 276
L GK E K
Sbjct: 794 LFSVNGKYREYIK 806
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 7/178 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGD 56
M+E G+ SI+ +L LC+ A+ + F+ VK T++I++R +
Sbjct: 636 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL---FSMNVKFDILTFNIVIRAMFK 692
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG EA++LF + IL + ++ + K + ++A + M PD+
Sbjct: 693 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ I ++ L + + ++P T + +I N K E +LL E
Sbjct: 753 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ +K I + ++ A+ K + A + F + + PT+ TY +++ L
Sbjct: 671 LFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEES 730
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF M + C D N ++ + G + +A L ++ G P+A + S+
Sbjct: 731 FEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSL 790
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
I+ F ++L R+ L NCI
Sbjct: 791 LIYLFSVNGKYREYIKLLPEKYRF-LREQAAVDNCI 825
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 164
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M K D++ N++++++CK ++D+A + +EM + G P+ +YS
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 224
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M + PN+ T+N +I K K EA +L D+MI+R
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C ++ A ++ M ++ PD TYN ++K + R + T
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ GL G + A K F+ MV +G+PP T +L +
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + D M++S
Sbjct: 404 LCNNGKLEKALEVFDYMQKS 423
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ +LCK +HV A F + + P V TYS L+ L G S+A
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 239
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+E+K +++ N+L++A K G EA + +M +PD F+Y+ I+ F
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P++ TYN +I+ CK+++VE+ +L EM RG D
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + A ++ +M + V PD TY+++L L G+ ++A EV++
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 419
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+K + Y+ M+ G+C K GK+++ F + +G+ P
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMC-KAGKVDDGWDLFCSLSLKGVKP 462
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A Q D + + P + T++ L+ G+ EA
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL D+M++R DI +NSL+ C +D+A M M S PD +Y+ I
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M LV + TY +I+ L + + A ++ +M+ G PD
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ ++ AL + M K + D + Y +++ + + G+ D +++
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ GLC K+ L+EA + M ++G P S T L
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPDSGTYNTL 505
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P I+ + L++ C + A Q F+ + P + TY+ L++G
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R D + + +L++ + G+ D A + ++M S G PD +YSI
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + V D M++ + +++ Y +I +CK KV++ + L + +G
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C + + A L+ +M ++ +PD TYN +++ +R G +
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 519
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ M F ST ++ + L G+L+++
Sbjct: 520 ELIREMRSCRFVGDASTIGLVANML--HDGRLDKS 552
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 4/264 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE--AHGMLREMRSIGAEPDAFS 116
+L +A LF M++ + I N LL A+ K D + +L +M +G EP +
Sbjct: 22 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
S ++ +C I ++D M P+ T+ +I L + K EA L+D M+
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG P+ +Y ++ C R ++++A L+ +M + D +N ++ L + D
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A +++ ME +G P+V TYS ++ LC G+ +A + M+++ I P T L
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDMIEKKINPNLVTFNAL 260
Query: 297 RNRLVGLG-FLDIIEILADKMERS 319
+ V G F++ ++ D ++RS
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRS 284
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K A + D+ K P + TY+ L+ G
Sbjct: 245 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+++F+ M+ + C D+ +N+L++ CK+ +++ + REM G D +Y+
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I D + +V M + P++ TY+ ++ LC N K+E+A ++ D M +
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + Y ++ C +V+ L ++ + V P+ TYN ++ L A
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ + M++ G P TY+ ++
Sbjct: 485 ALLKKMKEDGPLPDSGTYNTLI 506
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 166/345 (48%), Gaps = 4/345 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M +F +P+ L+ A H + F + + PTV ++ L+RG G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L DEM DI+ +N +++ K G +D A E+ + G +PD +Y+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+AN + + + +++ VP + YN +I K +EAY LL+ +G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P +YN IL +V+ ALR+ M K++ P+ TYN+++ +L R G+ D A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAF 397
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ +SM+K G +P+V T ++MV LCK + KL+EAC FE M + P T L +
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQ-KLDEACAIFEQMDYKVCTPDEITFCSLIDG 456
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEE 344
L +G +D + +KM S C + K F R E+
Sbjct: 457 LGKVGRVDDAYKIYEKMLDS-DCRTNSIVYTSLIKNFFNHGRKED 500
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 158/303 (52%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV P + L+ + + K + F+ K F P ++YSIL+ GL G
Sbjct: 508 MVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGF 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+E +LF M E+ C +D A+N +++ CK G +++A+ +L EM++ G EP +Y
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +L+E++++G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N++L E+N AL M + P++ TY +++ L +V +F++A
Sbjct: 688 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPP---YSSTVEM 295
W+ M+K+G PS +Y+ M+ GL K G + EA F+ + G+P Y++ +E
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGL-AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 296 LRN 298
L N
Sbjct: 807 LSN 809
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 178/402 (44%), Gaps = 72/402 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M + G+ P++ ++ ++ LCK + + A F+ ++ TP T+ L+ GLG VG
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------------------------- 85
+ +A K++++ML+ C + + + SL
Sbjct: 463 VDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522
Query: 86 -LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ M KAG ++ M E++S PDA SYSI IH +A + + + SMK
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL-----------AY 193
V + YN +I CK KV +AYQLL+EM +G P +Y +++ AY
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 194 ------HCDRAEVNM------------------ALRLITRMTKENVMPDRHTYNMVLKLL 229
R E+N+ A ++ + ++ + P+ +T+N +L L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDAL 702
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ + A ++SM++ P+ TY ++++GLCK + K +A +++ M +G+ P
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR-KFNKAFVFWQEMQKQGMKPS 761
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
+ + + + L G + L D+ + + NAM
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ CK V A+Q + K + F PTV TY ++ GL + L EA LF+E ++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++++ ++SL++ K G IDEA+ +L E+ G P+ ++++ + A +A +I+
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEAL 712
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
SMK PN TY +I LCK K +A+ EM ++G P SY +++
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ A L R +PD YN +++ L R A ++E +RG +
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHN 832
Query: 255 STYSVMVHGLCKKKGKLEEA 274
T V++ L K LE+A
Sbjct: 833 KTCVVLLDTL-HKNDCLEQA 851
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 2/280 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P+V T +V +L E + M + K A+ +L+ A + D
Sbjct: 129 FGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++M+ +G EP ++ I F + + S +LD MK +L ++ YN I
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K KV+ A++ E+ G PDE +Y +++ C ++ A+ + + K +P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ YN ++ G+FD A + E +G PSV Y+ ++ L +K GK++EA + FE
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL-RKMGKVDEALRVFE 367
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
M + P ST +L + L G LD L D M+++
Sbjct: 368 EMKKDAAPNL-STYNILIDMLCRAGKLDCAFELRDSMQKA 406
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K V A + F+ K + P + TY+IL+ L G+L A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAF 397
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L D M + ++ N +++ +CK+ +DEA + +M PD ++ I
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + +++ + M + N Y +I+ + + E+ +++ +M+ + +PD
Sbjct: 458 GKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E + + +PD +Y++++ L++ G + E++ S
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y++++ G C K GK+ +A + E M +G P Y S ++ L
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFC-KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 5/241 (2%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEA 98
F P + ++R L DV E + ++ E CP ++NSLL M + N D
Sbjct: 61 FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPE---SYNSLLLVMARCRNFDAL 117
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+L EM G P + + + +AN + F V+ +M+++ P Y +I
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGA 177
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+ L +M E G P + ++ V+ AL L+ M ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
YN+ + +VG+ D A + + +E G P TY+ M+ LCK +L+EA + F
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN-RLDEAVEMF 296
Query: 279 E 279
E
Sbjct: 297 E 297
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 168/329 (51%), Gaps = 19/329 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------DNAKHEFTPTVKTYSILVR 52
M++ G+ P++ ++++LC +V++A F D H FTP L++
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP-------LIK 322
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G G+L EA L+ M++ C +++A+N+L+ +C G+++EA + +M+ G P
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ +YSI I F ++ D+ + M + PNV TY C++ LCKN ++A L+
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
++M G P+ ++N + C V A++L+ RM +P+ TYN +L L R+
Sbjct: 443 EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+++ A +++ +E R P++ TY+ +++G + G + EA + F + G P S T
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF-SRAGMMGEALQLFGKALVRGTAPDSIT 561
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERSTS 321
+ + G ++I A +ER +S
Sbjct: 562 YNTMIHAYCKQG---KVKIAAQLVERVSS 587
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 7/315 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
EFG KP++ + LL AL ++ + + N K + P V TY+IL++ L +
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A KLF EM + CP D + + +++ ++CKAG ID+A + + P Y+ I
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALI 251
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ I ++L M + PNV +Y+CII LC + VE A+ L +M RG +
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ ++ ++ R ++ AL L M ++ P+ YN ++ L G + A +V
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M++ G P+V+TYS+++ G K G L A + + M+ G P T + + L
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGF-AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430
Query: 302 GLGFLDIIEILADKM 316
D L +KM
Sbjct: 431 KNSMFDQANSLVEKM 445
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 35/314 (11%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNI 95
+ F T TY +++ LG E+ + + +M C D+ ++ + G+
Sbjct: 68 NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI--CIINGYKRVGSA 125
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
++A M + G +P Y+ + A N + + +MK+ L+PNVFTYN +
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWS----------------------------- 186
++ LCKN++V+ A++L EM +G PD +
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVP 245
Query: 187 -YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
YNA++ C + +A++L+ M V P+ +Y+ ++ L G + A ++ M
Sbjct: 246 VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
RG ++ T++ ++ G C +GKL EA +++M+ +G P L + L G
Sbjct: 306 FLRGCDANIHTFTPLIKG-CFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364
Query: 306 LDIIEILADKMERS 319
L+ + D+M+RS
Sbjct: 365 LEEALQVCDQMQRS 378
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ + + LC V+ A + + + H P + TY+ L+ L + + EA
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF E+ R +++ +N++L +AG + EA + + G PD+ +Y+ IHA
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 124 FCEANDIHSVFRVLD---SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+C+ + ++++ SMK ++ P++ TY +I C +EEA LD+ I +G
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626
Query: 181 NPDEWSYNAIL 191
P+ ++NA++
Sbjct: 627 CPNFATWNALV 637
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I ++LL AL + + A F + P + TY+ ++ G G + EA
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIH 122
+LF + L R D + +N+++ A CK G + A ++ + S+ PD +Y+ I
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C +I LD + PN T+N ++R + +LD+++ +G
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 3/304 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+ IY + L+ C + A F K P V T++ L+ GL +SEA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
F +M E C +++ +L+ +C+ G I EA +L M G +P +Y +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 125 CEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D S +L M+ + ++PNV Y+ II LCK+ + +A L EM E+G PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + A +L+ M + + PD TYN ++ V+ G+F A E+++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG P+ TY+ M+ G CK+ +L+ A F +M +G P T L + G
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQD-RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408
Query: 304 GFLD 307
+D
Sbjct: 409 KRID 412
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 149/349 (42%), Gaps = 48/349 (13%)
Query: 6 IKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P++ ++ +LCK +H + F + + P + TY+ ++ G G S+A
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 65 KLFDEMLERKCPVDILAHNSLLEA-----------------------------------M 89
+L EMLERK D++ +N+L+ A
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 370
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
CK +D A M M + G PD F+++ I +C A I +L M R LV N
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TYN +I C + A L +MI G PD + N +L CD ++ AL +
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 490
Query: 210 MTKE-----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
M K V PD TYN+++ L+ G+F A E++E M RG P TYS
Sbjct: 491 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+ GLCK+ +L+EA + F M + P T L N G +D
Sbjct: 551 SMIDGLCKQS-RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 598
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 5/325 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVG 58
+ + G+ P + LLH LC V A FF + E T P V T++ L+ GL G
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF-HQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSY 117
+ EA L D M+E + + ++++ MCK G+ A +LR+M + P+ Y
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S I + C+ + M+ + P++FTYN +I C + + +A QLL EM+E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
R +PD +YNA++ + A L M ++P+ TYN ++ + R D
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 378
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A +++ M +G P V T++ ++ G C K ++++ + M G+ + T L
Sbjct: 379 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAK-RIDDGMELLHEMPRRGLVANTVTYNTLI 437
Query: 298 NRLVGLGFLDIIEILADKMERSTSC 322
+ +G L+ L+ +M S C
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVC 462
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
M+E G++P+ ++ +CK+ A + P V YS ++ L G
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S+A+ LF EM E+ D+ +NS++ C +G +A +L+EM PD +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TYN +I CK ++++ A + M +
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD +++ ++ +C ++ + L+ M + ++ + TYN ++ VG + A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T + ++ GLC GKL++A + F+ M
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLC-DNGKLKDALEMFKAM 491
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 13/291 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G P ++ L+ C K + + + + TY+ L+ G VG+
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI----------- 108
L+ A L +M+ DI+ N+LL+ +C G + +A M + M+
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G EPD +Y+I I + + M +VP+ TY+ +I LCK +++EA
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
Q+ M + +P+ ++N ++ +C V+ L L M + ++ D Y ++
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+VG + A ++++ M G YP T M+ G K+ +LE A E
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLE 675
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ +M ++ DI + N L++ C + A ++ +G PD +++ +H
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + M PNV T+ ++ LC+ ++ EA LLD M+E G P +
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y I+ C + + AL L+ +M + +++P+ Y+ ++ L + GR A ++
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+++G +P + TY+ M+ G C G+ +A + + M++ I P T L N V
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFC-SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 304 G-FLDIIEILADKMERS 319
G F + E+ + + R
Sbjct: 339 GKFFEAAELYDEMLPRG 355
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 12/254 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ + + L+H C + A P + T + L+ GL D G+L +A
Sbjct: 425 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 484
Query: 64 RKLFDEMLERKCPVD-----------ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
++F M + K +D +L +N L+ + G EA + EM G P
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YS I C+ + + ++ SM + PNV T+N +I CK +V++ +L
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 604
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
EM RG D Y ++ +N AL + M V PD T +L
Sbjct: 605 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 664
Query: 233 GRFDRATEVWESME 246
+RA + E ++
Sbjct: 665 EELERAVAMLEDLQ 678
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIK +++ + L+ + C Q D + TP V T+S L+ L G+L+EA
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA 354
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ L++EM+ R + + +NSL+ +C +DEA+ M+ M S G +PD ++Y+I I+
Sbjct: 355 KDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + R+ M ++ + TY+ +I+ C++ K+ A ++ EM+ +G +P
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E+ AL ++ +M K + D YN+++ + + D A ++
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFC 534
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G + +Y++M+ GLCK+ L EA F M ++G P T L
Sbjct: 535 SLPSKGVKRDIQSYNIMLSGLCKRS-SLSEADALFRKMKEDGYEPDGCTYNTL 586
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G +P+ + +L+ +CK + A +H + P V TY+I++ L G
Sbjct: 221 MMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGR 280
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F EM + ++ +NSL+ + C G D+ +LR+M + P+ ++S
Sbjct: 281 LDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSA 340
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + M + PN TYN +I LC +++++EA Q++D M+ +G
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD W+YN ++ C +V+ +RL +M+ ++ D TY+ +++ + + A
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAK 460
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+V++ M +G +P + TY++++ GLC G+LEEA + M
Sbjct: 461 KVFQEMVSQGVHPGIMTYAILLDGLC-DNGELEEALGILDQM 501
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 153/295 (51%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +Y L+ +++ C+R+ + A K + P T++ L+ GL G + EA
Sbjct: 120 GIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEA 179
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+ + D++ N+++ +C + EA ++ M + G +P+ F+Y ++
Sbjct: 180 VELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNR 239
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + S +L M+ + P+V TY II LCK+ ++++A EM +G +
Sbjct: 240 MCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKAN 299
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C + +L+ M + P+ T++ ++ LV+ G+ A +++
Sbjct: 300 VFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYN 359
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P+ TY+ +++GLC K +L+EA + ++MV +G P T +L N
Sbjct: 360 EMITRGIEPNTITYNSLIYGLCNDK-RLDEANQMMDLMVSKGCDPDIWTYNILIN 413
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+P+ + L++ LC K + A+Q D P + TY+IL+ G +
Sbjct: 361 MITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQ 420
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +++L++ C++ + A + +EM S G P +Y+I
Sbjct: 421 VDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAI 480
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ ++ +LD M + + ++ YN II +C KV++A+ L + +G
Sbjct: 481 LLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKG 540
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D SYN +L+ C R+ ++ A L +M ++ PD TYN +++ +R +
Sbjct: 541 VKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSV 600
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
++ E M++ GF ST +++ L G+L+++
Sbjct: 601 QLIEEMKRCGFSSDASTVKIVMDML--SSGELDKS 633
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+ + G +P+ + LL+ LC V A + D + P + T + +V GL
Sbjct: 151 IFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDR 210
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA L M+ C + + +L MCK+GN A +LR+M +P +Y+I
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + M+ + NVFTYN +I C + ++ QLL +MI R
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++A++ ++ A L M + P+ TYN ++ L R D A
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + M +G P + TY+++++G CK K ++++ + F M G+ + T L
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAK-QVDDGMRLFRKMSLRGMIADTVTYSTL 446
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 3/273 (1%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L GL D+ + +A LF ML + ++ N L + + D + ++M G
Sbjct: 62 LRSGLVDIKK-DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKG 120
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D ++ +I I+ FC + F + + + PN T+N ++ LC +V EA
Sbjct: 121 IAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAV 180
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L+D M+ PD + N I+ C + V+ A+ LI RM P++ TY +L +
Sbjct: 181 ELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRM 240
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ G A ++ ME R P V TY++++ LC K G+L++A +F M +GI
Sbjct: 241 CKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLC-KDGRLDDALSFFSEMETKGIKAN 299
Query: 290 SSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
T L G + D ++L D + R +
Sbjct: 300 VFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV ++ L L + L +M + D+ N ++ C+ + A
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ ++ +G EP+ +++ ++ C + ++D M VP++ T N I+ LC
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++V EA L+ M+ G P++++Y IL C AL L+ +M + P T
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y +++ L + GR D A + ME +G +V TY+ ++ C G+ ++ + M
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC-SFGRWDDGAQLLRDM 326
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFL 306
+ I P T L + LV G L
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKL 351
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 160/326 (49%), Gaps = 37/326 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
KP + + ++ A+CK + V A+ F A + V TY+ L+ G VG+L EA
Sbjct: 196 KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIG 255
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------------- 102
L +EM+ + ++ +N L++A+CK G + EA +L
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 103 ------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
M +G PD +Y+I I+ FC+ + + M + N+VP +
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY+ +I LCK+ ++ + L+DEM +RG D +Y++++ C ++ A+ L +M
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + P+ T+ ++L L + GR A EV++ + +G++ +V TY+VM++G C K+G
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC-KQGL 494
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
LEEA M D G P + T E +
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETI 520
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ LC + VK A F D F +Y+ L+ G+ +G+ A
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAA 183
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K ++ R D++ +N++++AMCK + EA+G+ EM G D +Y+ I+
Sbjct: 184 IKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYG 243
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +L+ M + PNV+TYN ++ LCK KV+EA +L M++ PD
Sbjct: 244 FCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ + EV A + M+ V PD HTY +++ + D A +++
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++ P + TYS ++ GLC K G++ + M D G P T L + L
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLC-KSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Query: 304 GFLDIIEILADKME 317
G LD L +KM+
Sbjct: 423 GHLDRAIALFNKMK 436
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P + L+ L++ C + K + P T + L++GL G++ +A
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L + ++ +++ +L+ +CK G+ A LR++ +PD Y+ I A
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDA 208
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + +V TYN +I C K++EA LL+EM+ + NP+
Sbjct: 209 MCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPN 268
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ C +V A ++ M K V PD TY+ ++ V +A V+
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M G P V TY+++++G CK K ++EA F+ M + + P T L + L
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNK-MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 304 GFLDIIEILADKM 316
G + + L D+M
Sbjct: 388 GRISYVWDLIDEM 400
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------------------------- 33
MV I P++Y + L+ ALCK VK A
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 34 -DNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
A+H F TP V TY+IL+ G + EA LF EM ++ I+ ++S
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ +CK+G I ++ EMR G D +YS I C+ + + + MK
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN+FT+ ++ LCK ++++A ++ +++ +G + + ++YN ++ HC + + AL
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++++M +P+ T+ ++ L + D+A ++ M RG
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+ P ++ L++ CK K V A F + P + TYS L+ GL G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S L DEM +R P D++ ++SL++ +CK G++D A + +M+ P+ F+++I
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C+ D VF+ L + K Y+L NV+TYN +I CK +EEA +L +M
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLT-KGYHL--NVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ G P+ +++ I+ + E + A +L+ +M ++
Sbjct: 507 DNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + +A F+ ML + I+ N +L++ K + A + + G +PD +
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+I I+ FC I F VL + + P+ T N +I+ LC +V++A D+++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G ++ SY ++ C + A++ + ++ PD YN ++ + +
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ M +G V TY+ +++G C GKL+EA MV + I P T +L
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFC-IVGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 297 RNRL 300
+ L
Sbjct: 276 VDAL 279
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + ++ ++ + S A L + + D++ N L+ C G I
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L ++ G PD + + I C + D + N +Y +I +C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K A + L ++ R PD YN I+ C V+ A L + M + + D
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN ++ VG+ A + M + P+V TY+++V LC K+GK++EA +
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC-KEGKVKEAKSVLAV 294
Query: 281 MVDEGIPP 288
M+ + P
Sbjct: 295 MLKACVKP 302
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 21/321 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G P +++ LC V+ A F K TP V TY+IL+ G
Sbjct: 448 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 507
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+ LF+EM C ++ + +L+ A KA + +A+ + M G P+ +Y
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 567
Query: 120 FIHAFCEANDIHSVFRVLDSM----------------KRYNLVPNVFTYNCIIRKLCKNE 163
+ C+A +I F V + R+ L PNV TY ++ LCK
Sbjct: 568 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 627
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
KV+ A++LLD M+ G P+ Y+A++ C +++ A + +MTK +P HTY
Sbjct: 628 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 687
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + + GR D A +V M K P+V TY+ M+ GLC + G+ E+A K +M +
Sbjct: 688 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC-RIGESEKALKLLSLMEE 746
Query: 284 EGIPPYSSTVEMLRNRLVGLG 304
+G P T L + GLG
Sbjct: 747 KGCSPNVVTYTALID---GLG 764
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 139/330 (42%), Gaps = 24/330 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P+ + L+H+ C K A++ + P Y+I + + +
Sbjct: 337 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 396
Query: 60 LSE------ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L A K++ EML C ++ + + +C G D+A +++EM G PD
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 456
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+YS I C A + F + MK + P+V+TY +I CK +E+A L +
Sbjct: 457 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 516
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
EM G +P +Y A++ + +V A + RM P+ TY ++ L + G
Sbjct: 517 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 576
Query: 234 RFDRATEVWESM----------------EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+A EV+ + ++ P+V TY +V GLCK K++ A +
Sbjct: 577 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH-KVDHAHEL 635
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ M+ G P + L + G +D
Sbjct: 636 LDAMLSSGCEPNHIVYDALIDGFCKAGKID 665
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 135/290 (46%), Gaps = 18/290 (6%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
R L VG+ +A +L EM+ + D ++ ++ +C A +++A + +EM+ +G
Sbjct: 428 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 487
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD ++Y+I I +FC+A I + + M+ P V TY +I K ++V +A
Sbjct: 488 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 547
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT----------------KE 213
+ M++ G P++ +Y A++ C ++ A + ++ +
Sbjct: 548 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 607
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ P+ TY ++ L + + D A E+ ++M G P+ Y ++ G CK GK++
Sbjct: 608 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA-GKIDS 666
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
A + F M G P T L +R+ G LD+ + +M + SCT
Sbjct: 667 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD-SCT 715
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 135/345 (39%), Gaps = 44/345 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G + + HALCK A + + + T+ ++ GL +
Sbjct: 235 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTH--MISGLMEASYF 292
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA M C +++ + +LL K + ++ M + G P+ ++
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV--------------- 165
+H++C D +++L+ M P YN I +C EK+
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 412
Query: 166 --------------------------EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
++A+QL+ EM+ +G PD +Y+ ++ + C +
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 472
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V A L M V PD +TY +++ + G ++A ++E M G P+V TY+
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 532
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++H K K ++ +A F MVD G P T L + L G
Sbjct: 533 LIHAYLKAK-QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 576
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 16/273 (5%)
Query: 23 RKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDIL 80
R ++ +FF A+ + ++ T Y L LG G +A +L E+ E V
Sbjct: 116 RDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGR 175
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
N L+ C+ G +EA L ++ G P +Y+ + A + FRV M
Sbjct: 176 LLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEM 235
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH-----C 195
+ FT C LCK + +A +MIER +++ + +L H
Sbjct: 236 SESGFCMDRFTVGCFAHALCKEGRWADAL----DMIER----EDFKLDTVLCTHMISGLM 287
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ + + A+ + RM + +P+ TY +L ++ + + M G P+ S
Sbjct: 288 EASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 347
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ +VH C +K A K M G PP
Sbjct: 348 LFNSLVHSYCNEK-DYAYAYKLLNRMTTCGCPP 379
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G++P Y L+ +CK ++ A + K PT TY+ L+ G + G+L +A
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
DEM+ R + +N L+ A+ G +DEA GM+++M G PD+ +Y+I I+
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + F + D M + P + TY +I L K +++ A L +++I GA+PD
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPD 480
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+NA++ HC ++ A L+ M K N++PD TYN +++ R G+ + A E+ +
Sbjct: 481 LIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLK 540
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M++RG P +Y+ ++ G K+G + +A + M+ G P
Sbjct: 541 EMKRRGIRPDHISYNTLISGY-SKRGDINDAFTIRDEMLSIGFNP 584
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 147/324 (45%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M IK ++Y + +++ LCK +K A F + ++ P V TY+ ++ G G
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR + D M R D + SL+ MCK G ++EA G+L +M+ IG P A +Y+
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 120 FIHAFCEANDIHSVFRVLDSMKR---------YNL------------------------- 145
I +C D+ F D M R YNL
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 146 -VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
VP+ TYN +I C+ ++A+ L DEMI +G P +Y +++ R + A
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L ++ +E PD +N ++ G DRA + + M+KR P TY+ ++ G
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C ++GK+EEA + + M GI P
Sbjct: 527 C-REGKVEEARELLKEMKRRGIRP 549
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
G K SI D L+ A C+ K A + FD K + P ++T++ ++ + +
Sbjct: 161 LGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTET 219
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
L+ EM K + N ++ +CK G + +A + M ++G +P+ +Y+ IH
Sbjct: 220 VWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIH 279
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C + VLD MK + P+ +TY +I +CK K+EEA +L++M E G P
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+YN ++ +C++ ++ A M + ++P TYN+++ L G+ D A +
Sbjct: 340 TAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI 399
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-- 296
+ M G P TY+++++G C + G ++A + M+ +GI P Y+S + +L
Sbjct: 400 KDMGDSGIVPDSITYNILINGYC-RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSK 458
Query: 297 RNRL 300
RNR+
Sbjct: 459 RNRM 462
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV I P++ + L+HAL + A D P TY+IL+ G G
Sbjct: 367 MVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGN 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L DEM+ + ++ + SL+ + K + A + ++ GA PD ++
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNA 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ F +L M + N+VP+ TYN +++ C+ KVEEA +LL EM RG
Sbjct: 487 LIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN +++ + R ++N A + M P TYN +++ L + + D A
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAE 606
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
E+ + M +G P STY ++ G+ K
Sbjct: 607 ELLKEMVSKGITPDDSTYFSLIEGIGK 633
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GI P + L++ C+ + K A D PT+ TY+ L+ L
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF++++ D++ N+L++ C GN+D A +L+EM PD +Y+
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + +L MKR + P+ +YN +I K + +A+ + DEM+ G
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP +YNA++ C + ++A L+ M + + PD TY L+ +G+ D ++
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTY---FSLIEGIGKVDDSS 638
Query: 240 EVWES 244
E +S
Sbjct: 639 EASDS 643
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 154/284 (54%), Gaps = 5/284 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+PS ++ LL L K V +A + F +A + +P + T++ ++ GL +G+L +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCK---AGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ ++ + +NSL++ CK AGN+ +L+EM G P A ++ + I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ ++ + RV + MK+ + +V TYN +I LC KVEE +L++EM + G +P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+E ++ +L C + + A I MT+ NV PD YN+++ + R+G+ + A V
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+M K+G P+V+TY+ ++ G + G A + M ++GI
Sbjct: 393 EAMAKKGISPNVTTYNCLITGF-SRSGDWRSASGLLDEMKEKGI 435
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE GI P+ L++ CK + A + F+ K + +V TY+ L+ GL G+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KL +EM + + + +L+ CK G + +A+ + M EPD Y+I
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + V ++M + + PNV TYNC+I ++ A LLDEM E+G
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + EV A++L+ M++ + P+ TYN +++ G A
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ MEK +V TY+V + C + GK++EA M+D+ + P T E ++
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFC-QIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 300 LVGLGF 305
++ G+
Sbjct: 554 MMEKGY 559
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G++P+ + ++ C + ++K A++ K V TY++ ++ +G+
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+ EA L +EML++ + + + ++ E M + G + G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV T+ ILV GL L++A +L + M ER C + L N +++A+CK G EA+G
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGF 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ MRS+G P +Y++ I FC+ +H +L M PN TYN + LCK
Sbjct: 68 IETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCK 127
Query: 162 NEKVE-----------------------------------EAYQLLDEMIERGANPDEWS 186
KV+ EAY LLDEM G P
Sbjct: 128 YGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGC 187
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YNAIL++ C + +N A +L RMT ++PD T+ M++ R R D A + + M+
Sbjct: 188 YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
G P Y+ ++ L + G++ EA + + M+ G+ P S T ++R +
Sbjct: 248 SAGLAPREVIYNTLIDAL-NRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQ 299
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M E G P+ + ++ ALCK A+ F + + +PT+ TY++L+ G +
Sbjct: 36 MGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEK 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ EM R + + +N+ L +CK G +D+A + R M D + Y+
Sbjct: 96 LHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTT 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + + +LD M+ VP YN I+ LCK ++ EA++L M G
Sbjct: 156 LIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG 215
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ +C ++ AL L+ +M + P YN ++ L R GR A
Sbjct: 216 ILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAY 275
Query: 240 EVWESMEKRGFYPSVSTYSVM 260
+ + M RG P+ TY++M
Sbjct: 276 RLLQEMISRGLSPNSRTYALM 296
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M E+ C ++ L++ +CKA + +A ++ M G P+A ++ + A C+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ +++M+ + P + TYN +I CK EK+ A ++L EM RG P+ +YN
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
L C +V+ AL L MT++ + D + Y ++ L + G+ A + + ME G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P Y+ ++ LCK ++ EA K F+ M GI P T M+
Sbjct: 181 CVPKPGCYNAILSWLCKGS-RINEAHKLFKRMTGSGILPDWLTFGMM 226
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 5/230 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M G+ P+I + L+ CK + + A + HE P TY+ + GL
Sbjct: 71 MRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHE--PNHVTYNTFLHGLCKY 128
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ +A LF M E+K +D+ + +L++ +C+AG + EA+ +L EM + G P Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ + C+ + I+ ++ M ++P+ T+ ++ C+ ++++A LL +M
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G P E YN ++ V+ A RL+ M + P+ TY ++ K
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRK 298
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y ++ LC+ K + F + + P Y+ L+ G G++ A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F EM R D+L + +++ C+ G++ EA + EM G EPD+ +++ I+
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + FRV + M + PNV TY +I LCK ++ A +LL EM + G P+
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+I+ C + A++L+ + D TY ++ + G D+A E+ +
Sbjct: 934 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G P++ T++V+++G C G LE+ K M+ +GI P ++T L
Sbjct: 994 EMLGKGLQPTIVTFNVLMNGFC-LHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CKR ++ A +FF + + TP V TY+ ++ G +G+
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EM + D + L+ CKAG++ +A + M G P+ +Y+
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ D+ S +L M + L PN+FTYN I+ LCK+ +EEA +L+ E G
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D +Y ++ +C E++ A ++ M + + P T+N+++ G +
Sbjct: 965 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1024
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M +G P+ +T++ +V C + L+ A ++ M G+ P T E L
Sbjct: 1025 KLLNWMLAKGIAPNATTFNSLVKQYCIRN-NLKAATAIYKDMCSRGVGPDGKTYENL 1080
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 151/283 (53%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P +L++ CK H+K A + ++ + +P V TY+ L+ GL G+L A
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + +I +NS++ +CK+GNI+EA ++ E + G D +Y+ + A
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ ++ +L M L P + T+N ++ C + +E+ +LL+ M+ +G P+
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ +C R + A + M V PD TY ++K + A +++
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M+ +GF SVSTYSV++ G K+K K EA + F+ M EG+
Sbjct: 1099 EMKGKGFSVSVSTYSVLIKGFLKRK-KFLEAREVFDQMRREGL 1140
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 152/333 (45%), Gaps = 3/333 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G+ ++ + ++H +C+ +K AH + + +TP V +YS +V G GEL
Sbjct: 682 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 741
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ KL + M + + + S++ +C+ + EA EM G PD Y+ I
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ DI + + M ++ P+V TY II C+ + EA +L EM +G
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++ ++ +C + A R+ M + P+ TY ++ L + G D A E+
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K G P++ TY+ +V+GLC K G +EEA K G+ + T L +
Sbjct: 922 LHEMWKIGLQPNIFTYNSIVNGLC-KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 302 GLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
G +D EIL + + + TI M G
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 43/335 (12%)
Query: 15 QLLHALCKRKHVKVAH---QFFD---NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFD 68
L+ + +R + V QFFD ++ + + + + L D G L EAR++F+
Sbjct: 583 SLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFE 642
Query: 69 EMLE-------------------------------RKCP-----VDILAHNSLLEAMCKA 92
+ML R+ P ++ ++N ++ +C+
Sbjct: 643 KMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL 702
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G I EAH +L M G PD SYS ++ +C ++ V+++++ MKR L PN + Y
Sbjct: 703 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 762
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
II LC+ K+ EA + EMI +G PD Y ++ C R ++ A + M
Sbjct: 763 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 822
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++ PD TY ++ ++G A +++ M +G P T++ +++G C K G ++
Sbjct: 823 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC-KAGHMK 881
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+A + M+ G P T L + L G LD
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 916
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ L+ LCK + A++ + K P + TY+ +V GL G
Sbjct: 890 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL E D + + +L++A CK+G +D+A +L+EM G +P ++++
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN------CI------------------ 155
++ FC + ++L+ M + PN T+N CI
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 156 -----------IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++ CK ++EA+ L EM +G + +Y+ ++ R + A
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 1129
Query: 205 RLITRMTKENVMPDRHTYNM 224
+ +M +E + D+ ++
Sbjct: 1130 EVFDQMRREGLAADKEIFDF 1149
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P+I + L++ C ++ + + P T++ LV+
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ +M R D + +L++ CKA N+ EA + +EM+ G +YS+
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE-- 177
I F + V D M+R L + ++ K ++ + +DE+IE
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 1174
Query: 178 ------RGAN 181
RGAN
Sbjct: 1175 LVDEQLRGAN 1184
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 155/303 (51%), Gaps = 8/303 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G P+++ + LL LC + A Q + + P V +Y+ ++ G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L +A + EML+R +++ +NS++ A+CKA +D+A +L M G P+ +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H +C + L M + P+V TYN ++ LCKN + EA ++ D M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +Y +L + + + L+ M + + P+ + +++++ + G+ D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
A V+ M ++G P TY ++ LC K G++E+A +YFE M+DE + P Y+S +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILC-KSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 294 EML 296
L
Sbjct: 452 HSL 454
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + L+ LCK A + FD+ K P + TY L++G G L E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ + + L+ A K G +D+A + +MR G PD +Y I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + R + M L P YN +I LC +K ++A +L+ EM++RG D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N+I+ HC V + +L M + V P+ TY+ ++ G+ D AT++
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLA 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SM G P TY+ +++G CK ++E+A F M G+ P
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKIS-RMEDALVLFREMESSGVSP 582
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L+ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 49 GRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168
Query: 121 IHAFCEAND----------------------------IHSVFRVLDSMKRY--------- 143
+ C+ N I+ F+ D K Y
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TYN II LCK + +++A ++L M++ G P+ +YN+I+ +C + A
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
KG L E ++MV GI P
Sbjct: 349 Y-ATKGALVEMHGLLDLMVRNGIHP 372
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M++ + + +NSL+ ++C D+A ++ EM G D ++
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + PN+ TY+ +I C K++EA +LL M+ G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ + + G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 663
Query: 300 LVGLG 304
L+ +G
Sbjct: 664 LLKVG 668
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 146/299 (48%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ + ++ ALCK + + A + + K+ P +TY+ +V G G+
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA M M G +P+ +Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ +I K KV++A + +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C V A+R +M E + P YN ++ L ++D+A
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG ++ ++ C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPNIITYSTLID 522
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 36/303 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P ++ LCK V+ A ++F+ E +P Y+ L+ L +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCK---------------------------- 91
+A++L EML+R +D + NS++++ CK
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519
Query: 92 -------AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
AG +DEA +L M S+G +PD +Y+ I+ +C+ + + + M+
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P++ TYN I++ L + + A +L + E G + +YN IL C + AL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
R+ + ++ + T+N+++ L++VGR D A +++ ++ G P V TYS+M L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Query: 265 CKK 267
++
Sbjct: 700 IEQ 702
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR DE+ C IL + + C AG +D L + G DA +++ +
Sbjct: 80 ARAGADEVTPNLCTYGIL-----IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 123 AFC------EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C +A DI VL M + +PNVF+YN +++ LC + +EA +LL M
Sbjct: 135 GLCADKRTSDAMDI-----VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 177 ERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+ G + PD SY ++ +++ A M ++P+ TYN ++ L +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQA 249
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D+A EV SM K G P+ TY+ +VHG C G+ +EA + + M +G+ P T
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC-SSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 295 MLRNRL 300
L + L
Sbjct: 309 SLMDYL 314
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP + L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK DEA M + + + + +++I
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY+ + L + +EE L M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ N+I+ R ++ A + + +++ + T ++ L LL
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N LA H A V+ R+ R + V P+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRM-ARAGADEVTPNLCTY 94
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D ++ K+GF ++ ++ GLC K
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 140
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF P +K+++I++ G G L +
Sbjct: 211 DYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPD 270
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++++++++ K D+ + + + ++ KAG + A + M G PD + I
Sbjct: 271 AKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I + M +V TYN +I+ CK + E+ Y+LLD+M +G +P
Sbjct: 331 QLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSP 390
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ IL +V + L+ RM K D TYN++L L V + + +VW
Sbjct: 391 NNMTYSYILKTTEKPKDV---IHLLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVW 447
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+ G P ++++MVHGL +G+L++A +Y+ M G+ P T
Sbjct: 448 DEMERNGSGPDQRSFTIMVHGL-HSQGRLDQALQYYTTMKSRGMTPEPRT 496
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 37/225 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P + + ++ LC +K +
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKKI---------------------------------- 338
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +F EM +R C D+ +N+L++ CK ++ + +L +M + G P+ +YS
Sbjct: 339 PEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYI 398
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + D V +L M++ + TYN I+ + Q+ DEM G+
Sbjct: 399 LKTTEKPKD---VIHLLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGS 455
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
PD+ S+ ++ + ++ AL+ T M + P+ T +V
Sbjct: 456 GPDQRSFTIMVHGLHSQGRLDQALQYYTTMKSRGMTPEPRTRILV 500
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G KP+++ + ++ + K ++ A F+ K P TY+ ++ G G VG
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + F+EM C D++ +NSL+ CK+G + + REM+ G +P+ SYS
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ + + + M+R VPN FTY ++ CK + +A++L +EM+E G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A++ CD + A +L +M V+P+ +YN ++ V+ DRA
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ ++ RG P + Y + GLC + K+E A M + GI
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLE-KIEAAKVVMNEMQENGI 409
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 157/320 (49%), Gaps = 7/320 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP++ L+ A CK ++ A +F+ D + P TY+ LV +G
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS+A +L +EMLE +++ + +L++ +C A + EA + +M + G P+ SY+
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +A ++ +L+ +K + P++ Y I LC EK+E A +++EM E G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ Y ++ + L L+ M + + T+ +++ L + +A
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468
Query: 240 EVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + M G P+ + Y+ M+ GLCK+ +++ A FE M EG+ P + L +
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKEN-QVKAATTLFEQMAQEGLVPDRTAYTSLMD 527
Query: 299 RLVGLGFLDIIEILA--DKM 316
+ G +++E LA DKM
Sbjct: 528 GNLKQG--NMLEALALRDKM 545
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 17/328 (5%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L ++ A Q F K P ++ + L+ +G+ ++
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N +++ M K G+I+ A G+ EM+ G PD +Y+ I + +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK + P+V TYN +I CK+ K+ + + EM + G P+ S
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + A++ M + +P+ TY ++ ++G A + M
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G +V TY+ ++ GLC + +++EA K F MV G+ P ++ L + GF
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAE-RMKEAEKLFGKMVTAGVIPNLASYNALIH-----GF- 353
Query: 307 DIIEILADKMERSTSCTIQELANAMRGK 334
+ A M+R+ EL N ++G+
Sbjct: 354 ----VKAKNMDRAL-----ELLNELKGR 372
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 9/279 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+ P++ + L+H K K++ A + + K P + Y + GL + +
Sbjct: 334 MVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+ + +EM E + L + +L++A K+GN E +L EM+ + E ++ +
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ + M + L PN Y +I LCK +V+ A L ++M +
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y +++ + + + AL L +M + + D Y ++ + + +A
Sbjct: 514 GLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKA 573
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKK---GKLEEA 274
E M P V+ G+ KK G ++EA
Sbjct: 574 RSFLEEMIGEEILPD----EVLCIGVLKKHYELGCIDEA 608
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 1/153 (0%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP ++ + L +EEA Q +M P S N +L + + R
Sbjct: 60 VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
M P TYN+++ + + G + A ++E M+ RG P TY+ M+ G
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY- 178
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
K G+L++ +FE M P T L N
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLIN 211
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 160/319 (50%), Gaps = 11/319 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L++ LC A + D K + TP V TYS L+ G++ EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEA 279
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++F+EM+ DI+ ++SL+ +C IDEA+ M M S G PD SY+ I+
Sbjct: 280 KEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + ++ M + LV N TYN +I+ + V++A + +M G +PD
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
W+YN +L CD + AL + M K + D TY V++ + + G+ + A ++
Sbjct: 400 IWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFC 459
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P + TY+ M+ GLC KG E + M EG+ M + ++ L
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLC-TKGLQHEVEALYTKMKQEGL--------MKNDSMLCL 510
Query: 304 GFLDIIEILADKMERSTSC 322
G D I I A+ +++ SC
Sbjct: 511 GDGD-ITISAELIKKMLSC 528
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 155/299 (51%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P + L++ C+R V A D + + P + Y+ ++ L
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR 205
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A F E+ + +++ + +L+ +C +G ++A +LR+M P+ +YS
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSA 265
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AF + + + + M R ++ P++ TY+ +I LC +++++EA Q+ D M+ +G
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ C V ++L +M++ ++ + TYN +++ +VG D+A
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQ 385
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM----VDEGIPPYSSTVE 294
E + M+ G P + TY++++ GLC G LE+A FE M +D I Y++ ++
Sbjct: 386 EFFSQMDSFGVSPDIWTYNILLGGLC-DNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQ 443
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 145/303 (47%), Gaps = 6/303 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT---VKTYSILVRGLGDVGELSEAR 64
PSI D ++LL A+ K K V K E + T++I++ ++S A
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISL--GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +ML+ D + SL+ C+ + +A ++ +M IG PD +Y+ I +
Sbjct: 141 SVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSL 200
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++ + R + PNV TY ++ LC + + +A +LL +MI+R P+
Sbjct: 201 CKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNV 260
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A+L +V A + M + ++ PD TY+ ++ L R D A ++++
Sbjct: 261 ITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M +G +P V +Y+ +++G CK K ++E+ K F M G+ + T L +G
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAK-RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVG 379
Query: 305 FLD 307
+D
Sbjct: 380 DVD 382
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF EM++ + I+ N LL A+ K D + ++M +G D ++++
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + VL M + P+ T ++ C+ +V +A L+D+M+E
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YNAI+ C VN AL + ++ + P+ TY ++ L GR++ A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M KR P+V TYS ++ K GK+ EA + FE MV I P T L N
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFV-KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303
Query: 299 RL 300
L
Sbjct: 304 GL 305
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 167/373 (44%), Gaps = 44/373 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M E G P+ +L ALC + A Q +P V YS ++ G +
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GE +A LF EM + D++ +N +++A+CKA +D+A +LR+M + GA+PD +Y
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S IH + + ++ MK+ L+PN+ T N + LCK+ + +EA + D M
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398
Query: 178 RGANPDEWSYNAIL------------------------AYHC-----------DRAEVNM 202
+G PD +SY +L A +C R V+
Sbjct: 399 KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + T M ++ V PD TY+ V+ R+GR A E + M RG P+ + YS ++
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQ 518
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP-----YSSTVEMLRNRLVGLGFLDIIEILADKME 317
G C G L +A + M+++GIP +SS + L + DI ++ D E
Sbjct: 519 GFC-MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE 577
Query: 318 RSTSCTIQELANA 330
R T L +
Sbjct: 578 RPGVITFNSLIDG 590
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M G+KP + + ++ ALCK + + A + P TYS ++ G +G
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA K+F EM +R +I+ NS L ++CK G EA M + G +PD FSY
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + +SMK + N + +I K V++A + EM ++G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y+ +++ + A+ +M + P+ Y+ +++ G +A
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530
Query: 240 EVWESMEKRGF-YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+ M +G P + +S +++ LC K G++ +A F++ D G P T L +
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLC-KDGRVMDAHDIFDLATDIGERPGVITFNSLID 589
Query: 299 RLVGLGFLDIIEILADKME 317
+G +D + D ME
Sbjct: 590 GYCLVGKMDKAFKILDAME 608
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 7/303 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP--TVKTYSILVRGLGDVG 58
MV GI+P+ ++ C + A + ++ P + +S ++ L G
Sbjct: 501 MVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDG 560
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ +A +FD + ++ NSL++ C G +D+A +L M +G EPD +Y+
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYN 620
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + + I+ + M+R + PN TY ++ L + + A + EMIE
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G Y IL C + A+ L ++ NV N ++ + +V R + A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E++ ++ G P+ STY VM+ L K G +E+A F M GI P S L N
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLL-KDGGVEDANNMFSSMEKSGIVPGSR----LLN 795
Query: 299 RLV 301
R++
Sbjct: 796 RII 798
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 29 AHQFFDNAKHEFTPTVKT-----YSILVRGLGDVGELSEARKLFDEMLERKC-------- 75
AH FD + TP + L R +++ L + R C
Sbjct: 93 AHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVCREEAGTQV 152
Query: 76 --PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
P +N L++ C+A D + + G + D + + + C AN
Sbjct: 153 AVPT-FCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEA 211
Query: 134 FRVL-DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA--NPDEWSYNAI 190
VL M VPN +Y+ +++ LC N + A LL M ++G +PD +Y+ +
Sbjct: 212 VNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTV 271
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + E A L MT++ V PD TYN+++ L + D+A V M G
Sbjct: 272 IHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P TYS M+HG G+L+EA K F M G+ P
Sbjct: 332 QPDTVTYSCMIHGY-ATLGRLKEAAKMFREMKKRGLIP 368
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 38/313 (12%)
Query: 1 MVEFGI-KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVG 58
M+ GI +P I ++++LCK V AH FD A P V T++ L+ G VG
Sbjct: 536 MINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVG 595
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ +A K+ D M DI+ +N+LL+ K G I++ + REM+ G +P+ +Y
Sbjct: 596 KMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYG 655
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN---------------- 162
I + A + + M V Y I+ LC+N
Sbjct: 656 IMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTM 715
Query: 163 -------------------EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++ EEA +L + G P+E +Y ++ V A
Sbjct: 716 NVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDA 775
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + M K ++P N ++++L+ G +A ++ + ST S+M+
Sbjct: 776 NNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLS- 834
Query: 264 LCKKKGKLEEACK 276
L +KGK +E K
Sbjct: 835 LFSRKGKYQEDIK 847
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELS 61
E G+ + + + H+LC+ V AHQ + P V +YS ++ G VGEL
Sbjct: 246 EVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQ 305
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
KL +EM + + +N ++ +CK G + EA +LREM S G PD Y+ I
Sbjct: 306 RVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 365
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ ++ S +R+ D M++ + P+ TY +I LC+ +V EA +L EM+ +
Sbjct: 366 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 425
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PDE +Y A++ +C ++ A L +M + + P+ TY + L + G D A E+
Sbjct: 426 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 485
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M ++G ++ TY+ +V+GLC K G +++A K + M G P + T L
Sbjct: 486 LHEMCRKGLELNIYTYNSLVNGLC-KAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y + ++ LCK V A + E P Y+ L+ G +G +S A
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDEM +RK D + + +++ +C+ G + EA + EM EPD +Y+ I
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + F + + M + L PN+ TY + LCK +V+ A +LL EM +G +
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C ++ A++L+ M PD TY ++ + RA E+
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 557
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M R P+V T++V+++G C G LE+ K + M+++GI P ++T L
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFC-MSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P L+ CK +K A + + TP + TY+ L GL GE+ A
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L EM + ++I +NSL+ +CKAGNID+A ++++M G PDA +Y+ + A+
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C++ ++ +L M L P V T+N ++ C + +E+ +LL M+E+G P+
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+++ +C R + + M + V+PD +TYN+++K + A +
Sbjct: 604 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M +GF +VS+Y+ ++ G K+K K EA + FE M EG+
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRK-KFLEARELFEQMRREGL 704
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 155/318 (48%), Gaps = 5/318 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLG-DVGEL 60
++G P ++D+ L + + A + FD + +V + ++ + L D+ +
Sbjct: 177 DWGSDPRVFDI--FFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 234
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+F E E + ++N + ++C+ G + EAH +L +M G PD SYS
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ +C+ ++ V ++++ M+ L PN +TYN +I LCK KV EA ++L EMI G
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD Y ++ C V+ A RL M K + PD TY V+ L + GR A +
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M + P TY+ ++ G C K+GK++EA M+ G+ P T L + L
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYC-KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473
Query: 301 VGLGFLDIIEILADKMER 318
G +D L +M R
Sbjct: 474 CKCGEVDTANELLHEMCR 491
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CK +V A++ FD K + +P TY+ ++ GL G
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EM+ ++ D + + +L++ CK G + EA + +M +G P+ +Y+
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ ++ + +L M R L N++TYN ++ LCK +++A +L+ +M G
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ +C E+ A L+ +M + P T+N+++ G +
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + M ++G P+ +TY+ ++ C + + + + M +G+ P +T +L
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYC-IRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++ +IY + L++ LCK ++ A + D F P TY+ L+ E
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +ML+R+ ++ N L+ C +G +++ +L+ M G P+A +Y+
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C N++ + + M +VP+ TYN +I+ CK ++EA+ L +M+ +G
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N SYNA++ R + A L +M +E ++ DR YN+ + G+ +
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 728
Query: 240 EVW-ESMEK 247
E+ E++EK
Sbjct: 729 ELCDEAIEK 737
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ A CK + + AH+ E PTV T+++L+ G G L +
Sbjct: 528 GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDG 587
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL MLE+ + +NSL++ C N+ + R M + G PD +Y+I I
Sbjct: 588 EKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647
Query: 124 FCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+A ++ + + M K +NL V +YN +I+ K +K EA +L ++M G
Sbjct: 648 HCKARNMKEAWFLHRDMVGKGFNL--TVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 705
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
D YN + D ++ + L L ++ ++ D T N
Sbjct: 706 ADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++ + ++ LC + V A + D H ++ ++ G G+
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ AR+LF+EM +R D + H +L+ +C+AG + EA +L+EM G + D +Y++
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ ++ FRV + M + PNV TY + LCK V A +LL EM +G
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++YN+++ C + A+R++T M D +TY ++ L + G FDRA
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M +G PS++TY+V+++G C G++E K E M+++ + P
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFC-MSGRVEGGKKLLEWMLEKNVRP 600
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ + L+ CKR ++ A + + P V TY+ L GL G+
Sbjct: 418 MVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L EM + +++ +NSL+ +CK GN+++A ++ EM + G D ++Y+
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + +L M + P++ TYN ++ C + +VE +LL+ M+E+
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C + + M + V P+ +TYN+++K + A
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M ++G + S+YS ++ L KKK K EA +F+ M +EG+
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKK-KFSEARVFFDKMRNEGL 703
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 154/289 (53%), Gaps = 6/289 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LC+ +K A + V TY++L+ G G + EA ++ +EM+ R+
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ + +L + +CK G++ A+ +L EM + G E + ++Y+ I+ C+ ++
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R++ M+ +V+TY +I LCK+ + + A+ +L EM+++G P +YN ++
Sbjct: 518 RIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGF 577
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V +L+ M ++NV P+ TYN ++K TE+++ M + P+
Sbjct: 578 CMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNE 637
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGI----PPYSSTVEMLRNR 299
+TY++++ G CK + ++EA + + M+++G+ YS+ + +L +
Sbjct: 638 NTYNILIKGHCKAR-NMKEALYFHQEMIEKGLRLTASSYSALIRLLNKK 685
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 3/270 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL AL +K A Q FD P V TY +V G GEL A KL DEM +
Sbjct: 261 LLKALLSAGRLKDACQHFDEMSSP--PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGL 318
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+ + S++ +C G + +A +L +M G DA ++ I FC D+ + R
Sbjct: 319 ESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARR 378
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+ + M++ L + T+ +I LC+ +++EA ++L EM+++G + D +Y ++ +C
Sbjct: 379 LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC 438
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
R + A R+ M V P+ TY + L + G A E+ M +G +V
Sbjct: 439 KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVY 498
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
TY+ +++GLC K G LE+A + M G
Sbjct: 499 TYNSLINGLC-KFGNLEQAMRIMTEMEAAG 527
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 127/259 (49%), Gaps = 1/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV + P++ L LCK+ V+ A++ + V TY+ L+ GL G
Sbjct: 453 MVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGN 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A ++ EM D+ + +L++ +CK+G D AH ML+EM G +P +Y++
Sbjct: 513 LEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNV 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + ++L+ M N+ PNV TYN ++++ C ++ ++ ++ M +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ HC + AL M ++ + +Y+ +++LL + +F A
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEAR 692
Query: 240 EVWESMEKRGFYPSVSTYS 258
++ M G YS
Sbjct: 693 VFFDKMRNEGLTAEPDVYS 711
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E ++P++ + L+ C K++K + + E P TY+IL++G
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG--AEPDAFSY 117
+ EA EM+E+ + ++++L+ + K EA +MR+ G AEPD +S+
Sbjct: 653 MKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712
Query: 118 SIFIHAFCEAN 128
+ I +F E N
Sbjct: 713 YMDI-SFNEDN 722
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 40/211 (18%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G + +Y L+ LCK AH + P++ TY++L+ G G +
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586
Query: 64 RKLFDEMLERKCPVDILAHNSLLE-----------------------------------A 88
+KL + MLE+ +++ +NSL++
Sbjct: 587 KKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV-- 146
CKA N+ EA +EM G A SYS I + D M+ L
Sbjct: 647 HCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAE 706
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
P+V+++ I + +E L DE++E
Sbjct: 707 PDVYSFYMDIS--FNEDNLESTITLCDELVE 735
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 147/287 (51%), Gaps = 2/287 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
EFG P++ L+ CK+ ++ A FF+ K TY++L+ GL G
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ +++++M E ++ +N ++ +CK G +A + EMR G + +Y+ I
Sbjct: 251 QGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + +V+D MK Y + PN+ TYN +I C K+ +A L ++ RG +
Sbjct: 311 GGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLS 370
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN +++ C + + + A +++ M + + P + TY +++ R + A ++
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SME+ G P V TYSV++HG C KG++ EA + F+ MV++ + P
Sbjct: 431 RSSMEELGLVPDVHTYSVLIHGFC-IKGQMNEASRLFKSMVEKMLEP 476
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 155/296 (52%), Gaps = 1/296 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G P + LL + FF+ +K + V ++ I+++G + GE+
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEI 179
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++ L E+ E +++ + +L++ CK G I++A + EM G + ++Y++
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVL 239
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH + F + + M+ + + PN++TYNC++ +LCK+ + ++A+++ DEM ERG
Sbjct: 240 IHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGV 299
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ + +YN ++ C + N A +++ +M + P+ TYN ++ VG+ +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALS 359
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ RG PS+ TY+V+V G C +KG A K + M + GI P T +L
Sbjct: 360 LCRDLKSRGLSPSLVTYNVLVSGFC-RKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 156/297 (52%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P++Y + +++ LCK K A + FD + + + TY+ L+ GL +
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA K+ D+M +++ +N+L++ C G + +A + R+++S G P +Y++
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNV 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC D +++ M+ + P+ TY +I +++ +E A QL M E G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C + ++N A RL M ++ + P+ YN ++ + G RA
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ME++ P+V++YS ++ LCK++ KL+EA E M+D GI P + ++
Sbjct: 499 RLFRDMEEKELAPNVASYSYLIRVLCKER-KLKEAEDLVEKMIDSGIDPSDTICNLI 554
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 55/300 (18%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLL--------------------EAMCKAGNIDEAHG 100
S A+ L +++ K +SLL A ++ ++D +
Sbjct: 56 SHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIY 115
Query: 101 MLREMRSIGAEP----------------------------------DAFSYSIFIHAFCE 126
EM G P D +S+ I I CE
Sbjct: 116 YFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCE 175
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A +I F +L ++ + PNV Y +I CK ++E+A L EM + G +EW+
Sbjct: 176 AGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT 235
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ + +M + V P+ +TYN V+ L + GR A +V++ M
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+RG ++ TY+ ++ GLC++ K EA K + M I P T L + +G L
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREM-KANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL 354
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 154/284 (54%), Gaps = 5/284 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+PS ++ LL L K V +A + F +A + +P + T++ ++ GL +G+L +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCK---AGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ ++ + +NSL++ CK AGN+ +L+EM G P A ++ + I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ ++ + RV + MK+ + +V TYN +I LC KVEE +L++EM + G +P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+E ++ +L C + + A I MT+ NV PD YN+++ + R+G+ + A V
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+M K+G P+V+TY+ ++ G + G A + M ++GI
Sbjct: 393 EAMAKKGISPNVTTYNCLITGF-SRSGDWRSASGLLDEMKEKGI 435
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE GI P+ L++ CK + A + F+ K + +V TY+ L+ GL G+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KL +EM + + + +L+ CK G + +A+ + M EPD Y+I
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + V ++M + + PNV TYNC+I ++ A LLDEM E+G
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + EV A++L+ M++ + P+ TYN +++ G A
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ MEK +V TY+V + C + GK++EA M+D+ + P T E ++
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFC-QIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 300 LVGLGF 305
++ G+
Sbjct: 554 MMEKGY 559
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G++P+ + ++ C + ++K A++ K V TY++ ++ +G+
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+ EA L +EML++ + + + ++ E M + G + G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDVGELSEARKLFDE 69
L+ + ALCK H + A + F+ + E P + Y+IL+ G G L + KL+ E
Sbjct: 149 LNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAE 208
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M ++ + +L+E +C D+A +L EMR G E + + + ++A +A
Sbjct: 209 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 268
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+VL+ Y + PN+ T+N ++ CK+ + A +L M ERG +P +YN
Sbjct: 269 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 328
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++V + ++M PD+ TY +++K+L R R + ++ + M G
Sbjct: 329 FFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 388
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
F P ++T ++++H LC++ + EEAC FE M GI P T + L L LG + +I
Sbjct: 389 FEPDLATSTMLIHLLCRRH-QFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLI 447
Query: 310 EILADKMERSTSCTIQELANAMRGKTG 336
+ L + M T +L + R K G
Sbjct: 448 QKLTNLMRSVPHST--KLPGSYRDKEG 472
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 34/260 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++P++ L+ LC ++ +A
Sbjct: 213 GVRPTVVTYGTLIEGLCVKRRP----------------------------------DQAI 238
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM E ++L N ++ A+ +AG +AH +L + G P+ +++ + +
Sbjct: 239 ALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGY 298
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ VL M + P TYN KN VE +MI G +PD+
Sbjct: 299 CKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQ 358
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + +++I M PD T M++ LL R +F+ A +E
Sbjct: 359 LTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFED 418
Query: 245 MEKRGFYPSVSTYSVMVHGL 264
M KRG P TY ++ L
Sbjct: 419 MFKRGIVPQYITYQKLMREL 438
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDVGELSEARKLFDE 69
L+ + ALCK H + A + F+ + E P + Y+IL+ G G L + KL+ E
Sbjct: 149 LNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAE 208
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M ++ + +L+E +C D+A +L EMR G E + + + ++A +A
Sbjct: 209 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 268
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+VL+ Y + PN+ T+N ++ CK+ + A +L M ERG +P +YN
Sbjct: 269 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 328
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++V + ++M PD+ TY +++K+L R R + ++ + M G
Sbjct: 329 FFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHG 388
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
F P ++T ++++H LC++ + EEAC FE M GI P T + L L LG + +I
Sbjct: 389 FEPDLATSTMLIHLLCRRH-QFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLI 447
Query: 310 EILADKMERSTSCTIQELANAMRGKTG 336
+ L + M T +L + R K G
Sbjct: 448 QKLTNLMRSVPHST--KLPGSYRDKEG 472
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 34/260 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++P++ L+ LC ++ +A
Sbjct: 213 GVRPTVVTYGTLIEGLCVKRRP----------------------------------DQAI 238
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM E ++L N ++ A+ +AG +AH +L + G P+ +++ + +
Sbjct: 239 ALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGY 298
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ VL M + P TYN KN VE +MI G +PD+
Sbjct: 299 CKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQ 358
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + +++I M PD T M++ LL R +F+ A +E
Sbjct: 359 LTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFED 418
Query: 245 MEKRGFYPSVSTYSVMVHGL 264
M KRG P TY ++ L
Sbjct: 419 MFKRGIVPQYITYQKLMREL 438
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 158/307 (51%), Gaps = 15/307 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
M E G+ PS+ + LL + KR +A Q FD + TP T++IL+RG
Sbjct: 191 MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS 116
+ E F EM KC D++ +N+L++ +C+AG + AH +++ M +S P+ +
Sbjct: 251 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I +C D+ +L M L PN TYN +I+ LC+ +K+++ ++L+ M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 177 -ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G PD + N ++ HC ++ A + +M++ V PD TY+++++ L + G F
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430
Query: 236 DRATEVWESMEKR-------GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI-- 286
RA E ++ + ++ G P V+ Y+ M LC GK ++A + F ++ G
Sbjct: 431 RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC-SNGKTKKAERVFRQLMKRGTQD 489
Query: 287 PPYSSTV 293
PP T+
Sbjct: 490 PPSYKTL 496
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 9/297 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKT----YSILVRGLGDVGELSEARKLFDEML 71
++ L + +++ A F + + + VK ++ L+R G G E+ K+F M
Sbjct: 133 MIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMK 192
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDI 130
E ++ NSLL + K G A + EM + G PD ++++I I FC + +
Sbjct: 193 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMV 252
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYN 188
F M R+ P+V TYN ++ LC+ KV+ A+ ++ M+++ N P+ +Y
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYT 312
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM-EK 247
++ +C + ++ AL L+ M + P++ TYN +++ L + D+ E+ E M
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
GF P T + ++ C GKLEEA FE M + + P S+T +L L G
Sbjct: 373 GGFIPDTCTLNTLIKAHC-TMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 428
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 48/332 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDV 57
M F P + + L+ LC+ VK+AH +P V TY+ L+RG
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMK 321
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA------------------------- 92
+++EA L EM+ R + + +N+L++ +C+A
Sbjct: 322 QDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCT 381
Query: 93 -----------GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
G ++EA + +M + +PD+ +YS+ + + C+ D D +
Sbjct: 382 LNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELA 441
Query: 142 RYNLV-------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ P V YN + LC N K ++A ++ ++++RG D SY ++ H
Sbjct: 442 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 500
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C L+ M + + +PD TY +++ L++ G A + E M K P+
Sbjct: 501 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 560
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + ++ L +KG E+ ++M++ I
Sbjct: 561 AIFHSILAALV-EKGCAHESASLVKLMLERRI 591
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 16/325 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ A C ++ A F+ ++ P TYS+LVR L G+ A
Sbjct: 374 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433
Query: 64 RKLFDEMLERK-------CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ FDE+ E++ C + A+N + E +C G +A + R++ G + D S
Sbjct: 434 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPS 492
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I C + F +L M R + VP+ TY +I L K A++ L++M+
Sbjct: 493 YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Query: 177 ERGANPDEWSYNAILAY----HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ P +++ILA C ++ ++ R ++N+ HT ++ L +
Sbjct: 553 KSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQS 612
Query: 233 GRFDRATE-VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
+ A + + S+EKR + S ++ GLCK K+ EA + +V++G+ +
Sbjct: 613 RKLLEAQKMLLFSLEKRQSV-DIDMCSTVISGLCKAH-KVSEAFALYYELVEKGMQHRLT 670
Query: 292 TVEMLRNRLVGLGFLDIIEILADKM 316
E LR L G L+ + ++ KM
Sbjct: 671 CQEDLRISLEAEGRLNEAKFVSKKM 695
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 85 LLEAMCKAGNIDEAHGMLR--EMRSIGAEP--DAFSYSIFIHAFCEANDIHSVFRVLDSM 140
++E + ++ N++ A + E +S GA D F ++ I ++ A +V +M
Sbjct: 133 MIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRF-FNSLIRSYGWAGLFQESIKVFKTM 191
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILAYHCDRAE 199
K + P+V T+N ++ + K + A QL DEM++ G PD +++N ++ C +
Sbjct: 192 KEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSM 251
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG--FYPSVSTY 257
V+ M++ PD TYN ++ L R G+ A V + M K+ P+V TY
Sbjct: 252 VDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTY 311
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE-----IL 312
+ ++ G C K+ + EA MV G+ P T L L LD I+ ++
Sbjct: 312 TTLIRGYCMKQ-DMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 313 ADKMERSTSCTIQELANA 330
D +CT+ L A
Sbjct: 371 GDGGFIPDTCTLNTLIKA 388
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 6/248 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ G KP + + + LC K A + F T +Y L+ G G
Sbjct: 449 DVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEA 508
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
L ML R D + +++ + K G+ AH L +M P + +
Sbjct: 509 GFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILA 568
Query: 123 AFCEANDIHS----VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
A E H V +L+ R N+ + T ++ LC++ K+ EA ++L +E+
Sbjct: 569 ALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEK 628
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV-GRFDR 237
+ D + +++ C +V+ A L + E M R T L++ + GR +
Sbjct: 629 RQSVDIDMCSTVISGLCKAHKVSEAFALYYELV-EKGMQHRLTCQEDLRISLEAEGRLNE 687
Query: 238 ATEVWESM 245
A V + M
Sbjct: 688 AKFVSKKM 695
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L ++M K D++ N++++++CK ++D+A + +EM + G P+ +YS
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M + PN+ T+N +I K K EA +L D+MI+R
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C ++ A ++ M ++ PD TYN ++K + R + T
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ GL G + A K F+ MV +G+PP T +L +
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + D M++S
Sbjct: 442 LCNNGKLEKALEVFDYMQKS 461
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ +LCK +HV A F + + P V TYS L+ L G S+A
Sbjct: 218 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 277
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+E+K +++ N+L++A K G EA + +M +PD F+Y+ ++ F
Sbjct: 278 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 337
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK+++VE+ +L EM RG D
Sbjct: 338 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 397
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + A ++ +M + V PD TY+++L L G+ ++A EV++
Sbjct: 398 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 457
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+K + Y+ M+ G+C K GK+++ F + +G+ P
Sbjct: 458 MQKSEIKLDIYIYTTMIEGMC-KAGKVDDGWDLFCSLSLKGVKP 500
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A Q D + + P + T++ L+ G+ EA
Sbjct: 252 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 311
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+D+M++R DI +NSL+ C +D+A M M S PD +Y+ I
Sbjct: 312 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 371
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M LV + TY +I+ L + + A ++ +M+ G PD
Sbjct: 372 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 431
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ ++ AL + M K + D + Y +++ + + G+ D +++
Sbjct: 432 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 491
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ GLC K+ L+EA + M ++G P S T L
Sbjct: 492 SLSLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPNSGTYNTL 543
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P I+ + L++ C + A Q F+ + P V TY+ L++G
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R D + + +L++ + G+ D A + ++M S G PD +YSI
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + V D M++ + +++ Y +I +CK KV++ + L + +G
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C + + A L+ +M ++ +P+ TYN +++ +R G +
Sbjct: 498 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 557
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ M F ST ++ + L G+L+++
Sbjct: 558 ELIREMRSCRFVGDASTIGLVANML--HDGRLDKS 590
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K A + +D+ K P + TY+ LV G
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 342
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+++F+ M+ + C D++ +N+L++ CK+ +++ + REM G D +Y+
Sbjct: 343 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I D + +V M + P++ TY+ ++ LC N K+E+A ++ D M +
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + Y ++ C +V+ L ++ + V P+ TYN ++ L A
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ + M++ G P+ TY+ ++
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLI 544
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M + + +N L+ C+ I A +
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R + ++AL L+ +M + D
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+N ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDM 283
Query: 282 VDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
+++ I P T L + V G F++ ++ D ++RS
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL D+ +L +A LF M++ + I+ N LL A+ K D + +M+ +
Sbjct: 18 ILRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
++Y+I I+ FC + I +L M + P++ T + ++ C +++ +A
Sbjct: 77 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD ++ ++ + + A+ L+ RM + P+ TY +V+
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME V ++ ++ LCK + +++A F+ M +GI P
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR-HVDDALNLFKEMETKGIRP 255
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L + L G + D ++L+D +E+
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y I+R + K+++A L M++ P +N +L+ + ++ + L +M
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ ++ +TYN+++ R + A + M K G+ PS+ T S +++G C K ++
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RI 133
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A + MV+ G P + T L
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTL 158
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 152/285 (53%), Gaps = 6/285 (2%)
Query: 8 PSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
P ++ + LL+ LC ++ +++ H D+ + P V +YS ++ G G+L +
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGG-DCPPDVVSYSTVINGFFKEGDLDKT 107
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++EML+++ +++ +NS++ A+CKA +D+A +L M G PD +Y+ +H
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + L M+ + P+V TYN ++ LCKN + EA ++ D M +RG P+
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L + + + L+ M + + P+ + +++++ + + + A V+
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILC-KSGRVEDAMLYFEQMIDEGLSP 331
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFSYSI 119
+AR +FDE+L R P D+ ++N LL +C EA +L M G + PD SYS
Sbjct: 35 DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + D+ + + M + PNV TYN II LCK + V++A ++L M++ G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+I+ C + A+ + +M + V PD TYN ++ L + GR A
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++SM KRG P ++TY ++ G KG L E ++MV GI P
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGY-ATKGALVEMHGLLDLMVRNGIHP 261
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 151/320 (47%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + ++H C K A F + + P V TY+ L+ L G
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R +I + +LL+ G + E HG+L M G P+ + +SI
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P YN+++ C + A LI M + + +N ++ + GR +
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++ M + G P + TYS ++ G C GK++EA K MV G+ P T L N
Sbjct: 389 KLFDLMVRIGVKPDIITYSTLIDGYC-LAGKMDEATKLLASMVSVGMKPDCVTYSTLING 447
Query: 300 LVGLGFLDIIEILADKMERS 319
+ + +L +ME S
Sbjct: 448 YCKISRMKDALVLFREMESS 467
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 159/359 (44%), Gaps = 36/359 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y L+ A K++ V+ A F + + P TY ++ L G
Sbjct: 254 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 313
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ + +NSL+ +C + A ++ EM G + ++
Sbjct: 314 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 373
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TY+ +I C K++EA +LL M+ G
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 493
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK------------------------------- 268
E++ + K G +STY++++HGLCK K
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 553
Query: 269 ---GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
G+ +EA F G+ P T ++ ++G G L+ ++ L ME CT+
Sbjct: 554 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME-DNGCTV 611
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P + L+H LC K + + ++ ++ G
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E+ KLFD M+ DI+ +++L++ C AG +DEA +L M S+G +PD +YS
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ + + + M+ + P++ TYN I++ L + + A +L + + G
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN IL C + ALR+ + ++ + T+N+++ L++VGR D A
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + G P+ TY +M + +G LEE + F M D G S + +
Sbjct: 564 DLFVAFSSNGLVPNYWTYRLMAENII-GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 622
Query: 300 LVGLG 304
L+ G
Sbjct: 623 LLQRG 627
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAY 193
V D + R +P+VF+YN ++ LC + +EA +LL M + G + PD SY+ ++
Sbjct: 39 VFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
+++ M + + P+ TYN ++ L + D+A EV +M K G P
Sbjct: 98 FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
TY+ +VHG C G+ +EA + + M +G+ P T L + L
Sbjct: 158 CMTYNSIVHGFC-SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP L++ CK +K A F + +P + TY+I+++GL
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + + +++ +N +L +CK D+A M + + + + +A +++I
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + LVPN +TY + + +EE QL M + G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
D N I+ R E+ A ++ + +++ + T ++ + LL
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 658
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 167/344 (48%), Gaps = 8/344 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP + L+ LCK + +V + D + F+P+ S LV GL G++ EA
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEAL 352
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L + E +I +N+L++++CK N DEA + M IG P+ +YSI I F
Sbjct: 353 NLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF 412
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + L M L P+V+ YN +I CK + A L+ EMI + P
Sbjct: 413 CRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTV 472
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +++ +C + ++N ALRL MT + ++P +T+ +L L R G A +++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + P+ TY+VM+ G C ++G + +A ++ M+++GI P + + L + L G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYC-EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTG 591
Query: 305 FLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELE 348
++ D + + +C + E+ TG E +LE
Sbjct: 592 QASEAKVFVDGLHKG-NCELNEIC-----YTGLLHGFCREGKLE 629
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 38/354 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + + P + L LLH L K +H +A + FD+ + P V Y+ ++R L ++ +
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A+++ +M C V+I+ +N L++ +CK + EA G+ +++ +PD +Y
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-----------------------------------YN 144
+ C+ + ++D M R +
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN+F YN +I LCK +EA L D M + G P++ +Y+ ++ C R +++ AL
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M + P + YN ++ + G A + M + P+V TY+ ++ G
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKME 317
C KGK+ +A + + M +GI P T L + L G + D +++ + E
Sbjct: 483 C-SKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE 535
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 163/395 (41%), Gaps = 70/395 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILV-----RG- 53
+ EFG+ P+I+ + L+ +LCK ++ A FD K P TYSIL+ RG
Sbjct: 358 VAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGK 417
Query: 54 -------LGDV----------------------GELSEARKLFDEMLERKCPVDILAHNS 84
LG++ G++S A L EM+ +K ++ + S
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ C G I++A + EM G P ++++ + A I ++ M +N
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN TYN +I C+ + +A++ L+EMIE+G PD +SY ++ C + + A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ + K N + Y +L R G+ + A V + M RG + Y V++ G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657
Query: 265 CK----------------------------------KKGKLEEACKYFEMMVDEGIPPYS 290
K K G +EA +++M++EG P
Sbjct: 658 LKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
T + N L GF++ EIL KM S Q
Sbjct: 718 VTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQ 752
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 140/330 (42%), Gaps = 37/330 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P Y L+H LC A F D K Y+ L+ G G+
Sbjct: 568 MIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA + +M R +D++ + L++ K + G+L+EM G +PD Y+
Sbjct: 628 LEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTS 687
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + D F + D M VPN TY +I LCK V EA L +M
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGN 747
Query: 180 ANPDEWSY---------------------NAIL-AYHCDRAEVNMALR------------ 205
+ P++ +Y NAIL + A NM +R
Sbjct: 748 SVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEAS 807
Query: 206 -LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LITRM + V PD TY ++ L R +A E+W SM ++G P Y+ ++HG
Sbjct: 808 ELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
C G++ +A + M+ +G+ P + T E
Sbjct: 868 C-VAGEMGKATELRNEMLRQGLKPNTETSE 896
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 155/395 (39%), Gaps = 109/395 (27%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAK-------------------- 37
M++ G+KPS+Y + L++ CK + A N K
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 38 --------HEFT-----PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
HE T P++ T++ L+ GL G + +A KLF EM E + + +N
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++E C+ GN+ +A L EM G PD +SY IH C +D + + N
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQ---------------------------------- 170
N Y ++ C+ K+EEA
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667
Query: 171 -LLDEMIERGANPDE----------------------W-------------SYNAILAYH 194
LL EM +RG PD+ W +Y A++
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR-VGRFDRATEVWESMEKRGFYPS 253
C VN A L ++M N +P++ TY L +L + VG +A E+ ++ K G +
Sbjct: 728 CKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLAN 786
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+TY++++ G C ++G++EEA + M+ +G+ P
Sbjct: 787 TATYNMLIRGFC-RQGRMEEASELITRMIGDGVSP 820
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 159/316 (50%), Gaps = 10/316 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P I + LL ALCK + A F K++ P TY+++ G V + K+
Sbjct: 135 QPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKV 194
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYSIFIHA 123
+EM++ D + + ++A C+AG ++EA + MR+ G+ P A +Y+I I A
Sbjct: 195 LEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGA 254
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
N + F++L+ M +P+V T+ +I +C K++EAY+ L EM +G PD
Sbjct: 255 LVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPD 314
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L C+ ALRL RM + P T+NM++ + +G D A E W
Sbjct: 315 IVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWY 374
Query: 244 SMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIP-PYSSTVEMLRNRL 300
M+KRG V TY VM+ GL C K+E+AC E +V++G+ PY L +L
Sbjct: 375 EMDKRGCAQDVDTYIVMIDGLFGC---NKVEDACFLIEDIVNKGMKLPYQKFDSFLM-QL 430
Query: 301 VGLGFLDIIEILADKM 316
+G + I L++ M
Sbjct: 431 SVIGNIRAIHRLSEHM 446
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/141 (17%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + L LC+ K+ + A + ++ + P+V+T+++L+ ++G+ A
Sbjct: 310 GYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGA 369
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + EM +R C D+ + +++ + +++A ++ ++ + G + + F+
Sbjct: 370 FETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQ 429
Query: 124 FCEANDIHSVFRVLDSMKRYN 144
+I ++ R+ + M+ ++
Sbjct: 430 LSVIGNIRAIHRLSEHMRTFH 450
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 161/303 (53%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G P + L+ + + K ++ F K+ F P ++Y+IL+ GL G
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +LF M E+ C +D A+N++++ CK+G +++A+ +L EM++ G EP +Y
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +++E++++G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E++ AL M P+ TY++++ L ++ +F++A
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEM 295
W+ M+K+GF P+V TY+ M+ GL K G + EA FE ++G Y++ +E
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGL-AKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 296 LRN 298
L N
Sbjct: 839 LSN 841
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 184/417 (44%), Gaps = 80/417 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M + G+ P++ ++ ++ LCK + + A F+ H+ P TY L+ GLG G
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 60 LSEARKLFDEMLE---------------------RK--------------CPVDILAHNS 84
+ EA KL+++ML+ RK C D+L N+
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ + KAG I++ + +E++++G PDA SY+I IH +A H + + +MK
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL--AYHCDR----- 197
V + YN +I CK+ KV +AYQLL+EM +G P +Y +++ DR
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 198 ----------------------------AEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++ A ++ + ++ + P+ +T+N +L L
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ A ++SM+ P+ TYS+++HGLCK + K +A +++ M +G P
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR-KFNKAFVFWQEMQKQGFKPN 793
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERST--------SCTIQELANAMRGKTGFR 338
T + + L G + + L +K + + I+ L+NA R +R
Sbjct: 794 VFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 8/337 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS +++ + K + ++ A F K +F P Y+ L+ L +
Sbjct: 160 GFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCM 219
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF +M E V++ +L+ + G +D A +L EM+S EPD Y++ I
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F +A + ++ MK LV + TY +I LCK +++ EA +L + M + P
Sbjct: 280 FGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ + + A L+ R ++ +P +YN +L L R G+ D A + +E
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+K P++STY++M+ LC K GKLE A + M D G+ P TV ++ +RL
Sbjct: 400 EMKKDAI-PNLSTYNIMIDMLC-KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA 457
Query: 304 GFLD----IIEILADKMERSTSCTIQELANAMRGKTG 336
LD I E L K R + T L + G+ G
Sbjct: 458 QRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL-GRHG 493
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G +++ L+ + V A D K + P V Y++ + G G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K F EM +D + + S++ +CKA ++EA + M P A++Y+
Sbjct: 286 VDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + A + +L+ +R +P+V +YNCI+ L + +V+EA + +EM ++
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKD 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A P+ +YN ++ C ++ AL + M + P+ T N+++ L + R D A
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRN 298
++E ++ + P TY ++ GL + G+++EA K +E M+D IP ++RN
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGL-GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 137/296 (46%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L ++ V A + F+ K + P + TY+I++ L G+L A
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETAL 429
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ D M + +++ N +++ +CKA +D+A + + PDA +Y I
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ +++ + M N +PN Y +IR K + E+ +++ +EM+ G +PD
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E+ L + +PD +Y +++ LV+ G A E++ +
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y+ ++ G C K GK+ +A + E M +G P Y S ++ L
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFC-KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
+ ++ CK V A+Q + K HE PTV TY ++ GL + L EA LF+E
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHE--PTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ ++++ ++SL++ K G IDEA+ ++ E+ G P+ ++++ + A +A +I
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
SMK PN TY+ +I LCK K +A+ EM ++G P+ ++Y +
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++ + A L + ++ + D YN +++ L R A ++E +G
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC 860
Query: 251 YPSVSTYSVMVHGLCK 266
T V++ L K
Sbjct: 861 SIYTKTCVVLLDSLHK 876
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
A+NSLL M + + +L EM G P + + +F ++ + F + +M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
++ P Y +I L + + L +M E G + + ++ V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ AL L+ M ++ PD YN+ + + G+ D A + + M+ G TY+ M
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 261 VHGLCKKKGKLEEACKYFEMM 281
+ LCK +L EA + FE M
Sbjct: 312 IGVLCKAD-RLNEAVELFEHM 331
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M + G KP+++ ++ L K ++ A F+ K + Y+ ++ GL +
Sbjct: 785 MQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH---GMLRE 104
S+A +LF+E + C + LL+++ KA I++A +LRE
Sbjct: 845 ASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
K P T+SI++ GL G+L A LF +M C D+L +N+L++ +C + +
Sbjct: 316 GKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRL 375
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
E+ G+L+EM G EP +F+ + C +DI +L M+ + VP + +
Sbjct: 376 QESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSL 435
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+++LCK+ K EA + L +M E G PD +Y+A L EV+ AL+L + +
Sbjct: 436 VKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGY 495
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD YN+++K L + R A + ME++G PS TY+ ++ GLCK LEEA
Sbjct: 496 CPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTD-HLEEAM 554
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA 328
+ MM+++ P T L N L G D +L ++M R CT +A
Sbjct: 555 LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRK-GCTPSSIA 606
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E GI+P+ + + + LC+R + A + H P +K + LV+ L G+
Sbjct: 385 MEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGK 444
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA K +M E DI+A+++ L+ + K +D+A + +++ + G PD +Y+I
Sbjct: 445 EVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNI 504
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ I +L M+ LVP+ TYN +I LCK + +EEA L MIE+
Sbjct: 505 LIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKE 564
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ ++ C+ + AL L M ++ P Y + L GR + A
Sbjct: 565 REPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEAL 624
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
ME+R P Y +++ + A + + MVD+G P
Sbjct: 625 VYLREMEEREMKPDTYVYVGLLNAFLVDSNQ-PLAFEILQEMVDKGKFP 672
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 22/318 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT--YSILVRGLGDVG 58
M F I+P + + +L+ + K + + FF+ + P T Y+ ++ L D G
Sbjct: 231 MKGFKIQPDVKIVTKLISSFSKEEELTC---FFEEMHEDMDPKASTLLYNSVLNSLVDNG 287
Query: 59 ELSEARKLFDEMLERKC----------------PVDILAHNSLLEAMCKAGNIDEAHGML 102
+ +A L + C P + + ++ + K G++D A G+
Sbjct: 288 SVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLF 347
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
R+M IG +PD Y+ I C +N + +L M+ + P FT NCI LC+
Sbjct: 348 RDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRR 407
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ A LL +M G P +++ C + A + + M +E PD Y
Sbjct: 408 HDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAY 467
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+ L L+++ D+A ++++ + +G+ P V Y++++ GLCK + ++ EA M
Sbjct: 468 SACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQ-RIAEAQNLLHEME 526
Query: 283 DEGIPPYSSTVEMLRNRL 300
++G+ P + T L + L
Sbjct: 527 EKGLVPSAVTYNTLIDGL 544
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I L+ LCK K V+ D A+ F P + YS + GL + E+ +A
Sbjct: 424 GHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQA 483
Query: 64 RKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
KLF ++ + CP D++A+N L++ +CK I EA +L EM G P A +Y+ I
Sbjct: 484 LKLFQDICAQGYCP-DVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLID 542
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + L M PNV TY+ +I LC + ++A L +EM +G P
Sbjct: 543 GLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTP 602
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y A + + N AL + M + + PD + Y +L + A E+
Sbjct: 603 SSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEIL 662
Query: 243 ESMEKRGFYPSV 254
+ M +G +P +
Sbjct: 663 QEMVDKGKFPDL 674
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 3/258 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G +P I L L K + V A + F D + P V Y+IL++GL
Sbjct: 455 MAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQR 514
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA+ L EM E+ + +N+L++ +CK +++EA L M EP+ +YS
Sbjct: 515 IAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYST 574
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C A + + M R P+ Y I L + EA L EM ER
Sbjct: 575 LINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEERE 634
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN--MVLKLLVRVGRFDR 237
PD + Y +L + +A ++ M + PD H N V +++ R
Sbjct: 635 MKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILKFSEDAR 694
Query: 238 ATEVWESMEKRGFYPSVS 255
+ +++ +G PS S
Sbjct: 695 TSSSIKNLLAKGSIPSAS 712
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 19/298 (6%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
Y L +L C A F+ +SILV G++ +A +L + M
Sbjct: 102 YTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETM 161
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
E+ ++ SL+ K +D+A + +M+ G PD Y + I C D+
Sbjct: 162 EEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDV 221
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+ MK + + P+V +I K E++ ++ + E ++ A+ YN++
Sbjct: 222 KKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKAS--TLLYNSV 279
Query: 191 LAYHCDRAEVNMALRLITRMTKEN----------------VMPDRHTYNMVLKLLVRVGR 234
L D V+ A L+ +T N V P+ T+++V+ L++ G
Sbjct: 280 LNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGD 339
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
D A ++ M + G P + Y+ ++ GLC +L+E+C + M + GI P S T
Sbjct: 340 LDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSN-RLQESCGLLQEMEESGIEPTSFT 396
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 111/218 (50%), Gaps = 2/218 (0%)
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYSIFIH 122
R L +++ +C + A L+ + AG + EA+ + +++ +G P+++SY+ +
Sbjct: 15 RALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLE 74
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
++ I + L M + + +T +++ C + ++A + +E+ +RG
Sbjct: 75 VLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGW-V 133
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
DE+ ++ ++ +V+ A LI M ++NV ++ T+ ++ V+ R D+A ++
Sbjct: 134 DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLF 193
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ M+K GF P +S Y V++ GLC K + C Y EM
Sbjct: 194 DKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEM 231
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 7/245 (2%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
L+R LG+ G + EA LFD++ + C + ++ LLE + K+ ID L+EM
Sbjct: 36 LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDH 95
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G D ++ + + +C + V + + V + + ++ ++ K KV++A
Sbjct: 96 GWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKA 154
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L++ M E+ ++ ++ +++ + V+ AL L +M K PD Y++++
Sbjct: 155 CELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGG 214
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L +A ++ M+ P V + ++ K+ EE +FE M E + P
Sbjct: 215 LCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKE----EELTCFFEEM-HEDMDP 269
Query: 289 YSSTV 293
+ST+
Sbjct: 270 KASTL 274
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 156/303 (51%), Gaps = 2/303 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
++P+ Y + L+H LC+R V+ A D+ P V TY+IL+ +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L D M C + + +N L++ MC G++D+A +LR + S G +P +Y+ +
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A ++ M R N PN T+N +I LC+ +++A QLL++M + G +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YNAI+ C++ V+ A+ L+++M PD TYN +LK L R+ A E+ ++
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + G P T++ ++ LC +KG + +A + F+ M D+G P S T + + L
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLC-QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301
Query: 305 FLD 307
LD
Sbjct: 302 KLD 304
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 138/287 (48%), Gaps = 3/287 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ + L+ +C V A + N H P+ Y+ +++GL +A
Sbjct: 72 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 131
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EML CP + N ++ ++C+ G + +A +L +M G + +Y+ I+
Sbjct: 132 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 191
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
CE ++ +L MK Y P++ TYN +++ LC + +A +L+D M + G PD
Sbjct: 192 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPD 251
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ + C + + A+ + +M + P+ TY+ ++ L + + D+A E++
Sbjct: 252 NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN 311
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M +GF P Y ++ L +EEA + + D GI P++
Sbjct: 312 EMGHKGFNPD-KIYQLLAECL-NDDDTIEEAIQTVRKLQDSGISPHT 356
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 35/283 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ P+ + ++++LC++ ++ A Q + +KH T + TY+ ++ GL +
Sbjct: 138 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 197
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M C DI+ +N+LL+ +C A +A ++ M G PD +++
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + V M PN TY+ II L K K+++A +L +EM +G
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 180 ANPDEWS----------------------------------YNAILAYHCDRAEVNMALR 205
NPD+ YNAIL C + A+
Sbjct: 318 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ M MPD TY ++++ L G + A E+ + R
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 420
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M +G KP I + LL LC A + DN ++ P T++ L+ L G
Sbjct: 208 MKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 267
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F +M ++ C + + +++++ + KA +D+A + EM G PD Y +
Sbjct: 268 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQL 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + I + + ++ + P+ YN I+ LC+N K E A ++ M+ G
Sbjct: 327 LAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PD+ +Y ++ +N A L+ ++ +V+
Sbjct: 387 CMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVL 423
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
M E G+ PS+ + LL + KR +A Q FD + TP T++IL+RG
Sbjct: 191 MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS 116
+ E F EM KC D++ +N+L++ +C+AG + AH +++ M +S P+ +
Sbjct: 251 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I +C D+ +L M L PN TYN +I+ LC+ +K+++ ++L+ M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 177 ERGAN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G PD + N ++ HC ++ A + +M++ V PD TY+++++ L + G F
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430
Query: 236 DRATEVWESMEKR-------GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI-- 286
RA E ++ + ++ G P V+ Y+ M LC GK ++A + F ++ G
Sbjct: 431 RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC-SNGKTKKAERVFRQLMKRGTQD 489
Query: 287 PPYSSTV 293
PP T+
Sbjct: 490 PPSYKTL 496
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 9/297 (3%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKT----YSILVRGLGDVGELSEARKLFDEML 71
++ L + +++ A F + + + VK ++ L+R G G E+ K+F M
Sbjct: 133 MIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMK 192
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDI 130
E ++ NSLL + K G A + EM + G PD ++++I I FC + +
Sbjct: 193 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMV 252
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYN 188
F M R+ P+V TYN ++ LC+ KV+ A+ ++ M+++ N P+ +Y
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYT 312
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM-EK 247
++ +C + ++ AL L+ M + P++ TYN +++ L + D+ E+ E M
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
GF P T + ++ C GKLEEA FE M + + P S+T +L L G
Sbjct: 373 GGFIPDTCTLNTLIKAHC-TMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRG 428
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 85 LLEAMCKAGNIDEAHGMLR--EMRSIGAEP--DAFSYSIFIHAFCEANDIHSVFRVLDSM 140
++E + ++ N++ A + E +S GA D F ++ I ++ A +V +M
Sbjct: 133 MIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRF-FNSLIRSYGWAGLFQESIKVFKTM 191
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILAYHCDRAE 199
K + P+V T+N ++ + K + A QL DEM++ G PD +++N ++ C +
Sbjct: 192 KEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSM 251
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG--FYPSVSTY 257
V+ M++ PD TYN ++ L R G+ A V + M K+ P+V TY
Sbjct: 252 VDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTY 311
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE-----IL 312
+ ++ G C K+ + EA MV G+ P T L L LD I+ ++
Sbjct: 312 TTLIRGYCMKQ-DMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 313 ADKMERSTSCTIQELANA 330
D +CT+ L A
Sbjct: 371 GDGGFIPDTCTLNTLIKA 388
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 148/353 (41%), Gaps = 44/353 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ A C ++ A F+ ++ P TYS+LVR L G+ A
Sbjct: 374 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433
Query: 64 RKLFDEMLERK-------CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ FDE+ E++ C + A+N + E +C G +A + R++ G + D S
Sbjct: 434 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPS 492
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I C + F +L M R + VP+ TY +I L K A++ L++M+
Sbjct: 493 YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Query: 177 ERGANPDEWSYNAILAY----HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK----- 227
+ P +++ILA C ++ ++ R ++N+ HT ++ K
Sbjct: 553 KSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQD 612
Query: 228 -------LLVRVGRFDRATEVWE-----------------SMEKRGFYPSVSTYSVMVHG 263
LL G + E+ S+EKR + S ++ G
Sbjct: 613 KAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSV-DIDMCSTVISG 671
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
LCK K+ EA + +V++G+ + E LR L G L+ + ++ KM
Sbjct: 672 LCKAH-KVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKM 723
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 161/303 (53%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G P + L+ + + K ++ F K+ F P ++Y+IL+ GL G
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +LF M E+ C +D A+N++++ CK+G +++A+ +L EM++ G EP +Y
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +++E++++G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E++ AL M P+ TY++++ L ++ +F++A
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEM 295
W+ M+K+GF P+V TY+ M+ GL K G + EA FE ++G Y++ +E
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGL-AKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 296 LRN 298
L N
Sbjct: 839 LSN 841
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 184/417 (44%), Gaps = 80/417 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M + G+ P++ ++ ++ LCK + + A F+ H+ P TY L+ GLG G
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 60 LSEARKLFDEMLE---------------------RK--------------CPVDILAHNS 84
+ EA KL+++ML+ RK C D+L N+
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ + KAG I++ + +E++++G PDA SY+I IH +A H + + +MK
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL--AYHCDR----- 197
V + YN +I CK+ KV +AYQLL+EM +G P +Y +++ DR
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 198 ----------------------------AEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++ A ++ + ++ + P+ +T+N +L L
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ A ++SM+ P+ TYS+++HGLCK + K +A +++ M +G P
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR-KFNKAFVFWQEMQKQGFKPN 793
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERST--------SCTIQELANAMRGKTGFR 338
T + + L G + + L +K + + I+ L+NA R +R
Sbjct: 794 VFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 8/337 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS +++ + K + ++ A F K +F P Y+ L+ L +
Sbjct: 160 GFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCM 219
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF +M E V++ +L+ + G +D A +L EM+S EPD Y++ I
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F +A + ++ MK LV + TY +I LCK +++ EA +L + M + P
Sbjct: 280 FGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ + + A L+ R ++ +P +YN +L L R G+ D A + +E
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+K P++STY++M+ LC K GKLE A + M D G+ P TV ++ +RL
Sbjct: 400 EMKKDAI-PNLSTYNIMIDMLC-KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA 457
Query: 304 GFLD----IIEILADKMERSTSCTIQELANAMRGKTG 336
LD I E L K R + T L + G+ G
Sbjct: 458 QRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL-GRHG 493
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G +++ L+ + V A D K + P V Y++ + G G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K F EM +D + + S++ +CKA ++EA + M P A++Y+
Sbjct: 286 VDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + A + +L+ +R +P+V +YNCI+ L + +V+EA + +EM ++
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKD 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A P+ +YN ++ C ++ AL + M + P+ T N+++ L + R D A
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRN 298
++E ++ + P TY ++ GL + G+++EA K +E M+D IP ++RN
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGL-GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 137/296 (46%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L ++ V A + F+ K + P + TY+I++ L G+L A
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETAL 429
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ D M + +++ N +++ +CKA +D+A + + PDA +Y I
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ +++ + M N +PN Y +IR K + E+ +++ +EM+ G +PD
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E+ L + +PD +Y +++ LV+ G A E++ +
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYT 609
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y+ ++ G C K GK+ +A + E M +G P Y S ++ L
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFC-KSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
+ ++ CK V A+Q + K HE PTV TY ++ GL + L EA LF+E
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHE--PTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ ++++ ++SL++ K G IDEA+ ++ E+ G P+ ++++ + A +A +I
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
SMK PN TY+ +I LCK K +A+ EM ++G P+ ++Y +
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++ + A L + ++ + D YN +++ L R A ++E +G
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC 860
Query: 251 YPSVSTYSVMVHGLCK 266
T V++ L K
Sbjct: 861 SIYTKTCVVLLDSLHK 876
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
A+NSLL M + + +L EM G P + + +F ++ + F + +M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
++ P Y +I L + + L +M E G + + ++ V
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ AL L+ M ++ PD YN+ + + G+ D A + + M+ G TY+ M
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 261 VHGLCKKKGKLEEACKYFEMM 281
+ LCK +L EA + FE M
Sbjct: 312 IGVLCKAD-RLNEAVELFEHM 331
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M + G KP+++ ++ L K ++ A F+ K + Y+ ++ GL +
Sbjct: 785 MQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH---GMLRE 104
S+A +LF+E + C + LL+++ KA I++A +LRE
Sbjct: 845 ASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P ++ + +++A CK V A F ++ P + TY L+ G +G+
Sbjct: 183 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYS 118
+ A+ + M E+ +++ + L++ CK +DEA +LR M+ A PD +Y
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I +C I R+LD M R L N+F N +I CK ++ EA ++ M++
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +SYN +L +C + A L +M +E + P TYN +LK L RVG FD A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422
Query: 239 TEVWESMEKRGFYP-----------------------------------SVSTYSVMVHG 263
++W M KRG P S T++ M+ G
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
LC K GK+ EA + F+ M D G P T L
Sbjct: 483 LC-KMGKMVEAEEIFDKMKDLGCSPDGITYRTL 514
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 44/335 (13%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
EF P+++D+ +L ++ K A FDN K P++++ + L+ L GE
Sbjct: 117 EFAFSPTVFDM--ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 174
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A ++ +M+ D+ + ++ A CK G +DEA G +++M ++G EP+ +Y I
Sbjct: 175 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 234
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK-------------------- 161
+ + D+ + VL M + NV TY +I+ CK
Sbjct: 235 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 294
Query: 162 ----------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
K+++A +LLDEM+ G + + N+++ +C R E++ A
Sbjct: 295 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ITRM N+ PD ++YN +L R G A + + M + G P+V TY+ ++ GLC
Sbjct: 355 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414
Query: 266 KKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ G ++A + + +M+ G+ P YS+ ++ L
Sbjct: 415 -RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 69/386 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV++ +KP Y + LL C+ H A D E PTV TY+ L++GL VG
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418
Query: 60 LSEARKLFDEMLERKCPVD--------------------------ILAH---------NS 84
+A +++ M++R D ILA N+
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ +CK G + EA + +M+ +G PD +Y I +C+A+++ F+V +M+R
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P++ YN +I L K+ ++ E LL EM RG P+ +Y A++ C ++ A
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP------------ 252
MT+ + + + ++ L R+GR D A + + M GF+P
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 658
Query: 253 ------------SVST--------YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S T Y++ + GLC K GK+++A ++F M+ +G P + T
Sbjct: 659 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFT 717
Query: 293 VEMLRNRLVGLGFLDIIEILADKMER 318
L + G +D L D+M R
Sbjct: 718 YCTLIHGYSAAGNVDEAFRLRDEMLR 743
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+K +++ + L++ CKR + A P +Y+ L+ G G
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+ML+ +L +N+LL+ +C+ G D+A + M G PD YS
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + T+N +I LCK K+ EA ++ D+M + G
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ +C + V A ++ M +E + P YN ++ L + R T
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA-CKYFEMMVDEGIPPYSSTVEMLRN 298
++ M RG P++ TY ++ G C K+G L++A YFE M + G+ + +
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWC-KEGMLDKAFSSYFE-MTENGLSANIIICSTMVS 621
Query: 299 RLVGLGFLDIIEILADKM 316
L LG +D +L KM
Sbjct: 622 GLYRLGRIDEANLLMQKM 639
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 6 IKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I PSI + L+ L K R+ V+V + TP + TY L+ G G L +A
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ EM E +I+ ++++ + + G IDEA+ ++++M G PD + F+ +
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSD 655
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
I + LD + L+PN YN I LCK KV++A + + +G PD
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y ++ + V+ A RL M + ++P+ TYN ++ L + DRA ++
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ ++G +P+V TY+ ++ G C K G ++ A K + M++EGI P
Sbjct: 776 LHQKGLFPNVVTYNTLIDGYC-KIGNMDAAFKLKDKMIEEGISP 818
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 33/246 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+I L+ CK + K +F+ ++ + + S +V GL +G + EA
Sbjct: 573 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 632
Query: 64 RKLFDEM----------------------------LERKCPVDILAHNSL----LEAMCK 91
L +M L+ C +L +N + + +CK
Sbjct: 633 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 692
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G +D+A + G PD F+Y IH + A ++ FR+ D M R LVPN+ T
Sbjct: 693 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 752
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCK+E V+ A +L ++ ++G P+ +YN ++ +C ++ A +L +M
Sbjct: 753 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812
Query: 212 KENVMP 217
+E + P
Sbjct: 813 EEGISP 818
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I + L++ LCK ++V A + F + P V TY+ L+ G +G
Sbjct: 741 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 800
Query: 60 LSEARKLFDEMLE 72
+ A KL D+M+E
Sbjct: 801 MDAAFKLKDKMIE 813
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M IK S+ + +++ LCK +K A +F + P V TY+ ++ G G
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR +FD M R D + S + MCK G ++EA GML +M+ IG P A +Y+
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++ F D M R L+P V TYN +I L + K++EA ++ EM E+G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C V A L M + + P R TY ++ +L + GR +A
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++E + ++G +P + ++ ++ G C G ++ A + M + P T L
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHC-ANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M GIKP++ + ++H C R V+ A FD K P TY + G+ G+
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI------------------------ 95
L EA + ++M E + +N+L++ C GN+
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336
Query: 96 -----------DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
DEA G+++EM G PD+ +Y+I I+ +C ++ F + D M
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P TY +I L K ++++A L ++++ +G PD +NA++ HC ++ A
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M + V+PD T+N +++ R G+ + A E+ E M+ RG P +Y+ ++ G
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
K+G +++A + + M+ G P
Sbjct: 517 -SKRGDMKDAFRVRDEMLSIGFNP 539
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 9/302 (2%)
Query: 4 FGIKPSI-YDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
GIK + YDL L+ A C+ K A + FD K + P V + ++
Sbjct: 116 LGIKTYVLYDL--LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTE 173
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A L+ EM + ++ N ++ +CK G + +A + M ++G +P+ +Y+ I
Sbjct: 174 KAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTII 233
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H +C + + D MK + P+ +TY I +CK K+EEA +L++M E G
Sbjct: 234 HGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLR 293
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN ++ +C++ + MA +M +E +MP TYNM++ L + D A +
Sbjct: 294 PTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGI 353
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLR 297
+ M ++G P TY+++++G C + G +++A + M+ +GI P Y+S + +L
Sbjct: 354 IKEMSEKGLVPDSVTYNILINGYC-RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLS 412
Query: 298 NR 299
R
Sbjct: 413 KR 414
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G++P+ + L+ C + ++++A + D E PTV TY++L+ L +
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + EM E+ D + +N L+ C+ GN+ +A + EM S G +P +Y+
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + + + + R + P++ +N +I C N ++ A+ +L EM +
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE ++N ++ C +V A LI M + PD +YN ++ + G A
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAF 526
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
V + M GF P++ TY+ ++ GLCK + + + A + + M+ +GI P Y S +E
Sbjct: 527 RVRDEMLSIGFNPTLLTYNALIQGLCKNE-EGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Query: 296 LRN 298
+ N
Sbjct: 586 IGN 588
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y + I A CE F D MK ++P+V N ++ K+ + E+A+ L EM
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++N ++ C ++ A I M + P+ TYN ++ GR +
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A +++ M+ RG P TY + G+CK+ GKLEEA E M + G+ P + T L
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKE-GKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 297 RNRLVGLGFLDIIEILADKMER 318
+ G L++ DKM R
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVR 324
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 5/205 (2%)
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I VF L + + Y+ +IR C+ ++ ++A++ D M +G P + N
Sbjct: 102 IREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACND 161
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+L+ A L M + + T+N+++ +L + G+ +A E ME G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P+V TY+ ++HG C +G++E A F++M G+ P S T + + G L+
Sbjct: 222 IKPNVVTYNTIIHGYC-SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280
Query: 310 EILADKME----RSTSCTIQELANA 330
+ +KM+ R T+ T L +
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDG 305
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 161/316 (50%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G P + ++ +LCK++ A FFD+ KH F P V Y+ LV G G++
Sbjct: 239 MEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDI 298
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S+A ++F +M ++ ++ +++++C+ G I AH + EM G +P+A +++
Sbjct: 299 SKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSL 358
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR + +YN II C++E +EEA ++L+ M+++G
Sbjct: 359 MRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGV 418
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N I +VN A R+ RM + N P+ TYN+++++ D +
Sbjct: 419 APNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLK 478
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M++ P+V+TY +++ C K EM+ ++ + P S E + L
Sbjct: 479 MKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELL 538
Query: 301 VGLGFLDIIEILADKM 316
G L E L DKM
Sbjct: 539 RKAGQLKKHEELVDKM 554
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 125/260 (48%), Gaps = 8/260 (3%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F + + Y+ ++ G + + A + D M R + + ++L+ +AG EA
Sbjct: 174 FPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAV 233
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCE---ANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
M G PD ++SI I + C+ AN+ S F DS+K + P+V Y ++
Sbjct: 234 HAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFF---DSLK-HRFEPDVVVYTSLV 289
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
C+ + +A ++ +M G P+ ++Y+ ++ C ++ A + + M
Sbjct: 290 HGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCD 349
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ T+N ++++ V+ GR ++ +V+ M++ G +Y+ ++ C+ + LEEA K
Sbjct: 350 PNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDEN-LEEAAK 408
Query: 277 YFEMMVDEGIPPYSSTVEML 296
+MV +G+ P +ST +
Sbjct: 409 ILNLMVKKGVAPNASTFNFI 428
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ V+D MK + V T++ ++R+ + EA + M + G PD +++ +++
Sbjct: 198 WHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISS 257
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + N A + K PD Y ++ R G +A EV+ M+ G P+
Sbjct: 258 LCKKRRANEAQSFFDSL-KHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPN 316
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
V TYS+++ LC+ G++ A F M+D G P + T L V G + + +
Sbjct: 317 VYTYSIVIDSLCRC-GQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVY 375
Query: 314 DKMER 318
++M+R
Sbjct: 376 NQMKR 380
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 91/247 (36%), Gaps = 72/247 (29%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP++Y ++ +LC+ + AH F P T++ L+R G +
Sbjct: 312 GIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKV 371
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA------------------------- 98
K++++M CP D +++N ++E+ C+ N++EA
Sbjct: 372 LKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGC 431
Query: 99 ----------HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
H M M+ + +P+ +Y+I + F E+ V ++ M + PN
Sbjct: 432 IAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPN 491
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLL------------------------------------ 172
V TY +I C + AY+L+
Sbjct: 492 VNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELV 551
Query: 173 DEMIERG 179
D+M+ RG
Sbjct: 552 DKMVARG 558
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 145/288 (50%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P++Y + L+ CK + K A + + + E P V T+ IL+ GL GE
Sbjct: 243 MREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR LF M++ +I +NSL++A CK G++ EA + E+ PD F+YSI
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + M + ++ N TYN +I CK K+++A ++ +M E G
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++ ++ +C + A+ + + M +++ PD TY ++ + G A
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+++ M G P+ T S ++ GLC K GK+ +A + F ++ P
Sbjct: 483 KLYSDMLDNGITPNCYTISCLLDGLC-KDGKISDALELFTEKIEFQTP 529
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 166/356 (46%), Gaps = 36/356 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ PS+ L+ C++ + A + FD + + PTV Y+IL+RGL +
Sbjct: 173 MISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNK 232
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + M E ++ +N+L++ CK N +A + ++M G PD ++ I
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGI 292
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ ++ + + +M ++++ PN+ YN +I CK V EA L E+
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y+ ++ C + A + +MTKE ++ + TYN ++ + G+ D+A
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E+ M + G P+V T+S ++ G CK
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMERST 320
K G ++EA K + M+D GI P T+ L + L G + D +E+ +K+E T
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQT 528
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 151/336 (44%), Gaps = 6/336 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P++Y +L+ LCK + V+ A + T ++ ++L+ L G +++
Sbjct: 115 PNVYG--ELIIVLCKMELVEEALSMYHKVGAALT--IQACNVLLYVLVKTGRFELLWRIY 170
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+EM+ ++ +L++ C+ G++ A M EMR G P Y+I I C
Sbjct: 171 EEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD 230
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
N I + +M+ + PNV+TYN ++ CK ++A +L +M+ G PD ++
Sbjct: 231 NKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C E+ A L M K +V P+ YN ++ +VG A ++ +E+
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
P V TYS+++ GLC + EEA FE M EGI S T L + G +D
Sbjct: 351 FEVSPDVFTYSILIRGLCSVS-RTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409
Query: 308 -IIEILADKMERSTSCTIQELANAMRGKTGFRKSRS 342
+EI + E + + + G R ++
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 132/281 (46%), Gaps = 49/281 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++F + P+I + L+ A CK V A F + + E +P V TYSIL+RGL V
Sbjct: 313 MIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR 372
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F++M + + + +NSL++ CK G +D+A + +M G EP+ ++S
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432
Query: 120 FIHAFCEANDIHSVFRVL-----------------------------DSMKRYN------ 144
I +C+ ++ + + +++K Y+
Sbjct: 433 LIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNG 492
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE----------RGANP---DEWSYNAIL 191
+ PN +T +C++ LCK+ K+ +A +L E IE G+ P + +Y A++
Sbjct: 493 ITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALI 552
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
C + + A++L + M + + PD Y ++L+ L +V
Sbjct: 553 HGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV + P + ++ CK +K A + + D + TP T S L+ GL G+
Sbjct: 453 MVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512
Query: 60 LSEARKLFDEMLE---RKCPVDI----------LAHNSLLEAMCKAGNIDEAHGMLREMR 106
+S+A +LF E +E +C VD +A+ +L+ +C+ G +A + +MR
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
G +PD Y + + + I + M ++ ++PN
Sbjct: 573 RYGLQPDEVIYVVMLRGLFQVKYILMMLHA--DMLKFGVIPN 612
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 160/312 (51%), Gaps = 3/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + ++ +LC R +++A + D K P+V TY+IL+ G ++EA
Sbjct: 161 GFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEA 220
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDE++ R D+ +N+++ +CK G D A +R + + G PD SY+I + +
Sbjct: 221 LELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRS 280
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + R++ M PNV T++ +I C+ +V EA +L+ M E+G PD
Sbjct: 281 FLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPD 340
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+SY+ +++ C +++A+ + +M + +PD YN +L L + G D A +V+E
Sbjct: 341 SYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFE 400
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+++ G P+V Y+ M L K+ +A + M+ +GI P T L + L
Sbjct: 401 KLDEVGCPPTVRAYNTMFSALWSCGNKI-KALEMISEMIRKGIDPDEITYNSLISCLCRD 459
Query: 304 GFLD-IIEILAD 314
G +D I +L D
Sbjct: 460 GLVDEAIGLLVD 471
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
+V G KP + +L+ +++K A + + + P V +Y+ ++ G ++
Sbjct: 88 VVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQI 147
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++FD M R D++ +N ++ ++C G ++ A ++ E+ G +P +Y+I
Sbjct: 148 DSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTIL 207
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A I+ + D + L P+++TYN IIR +CK + A + + RG
Sbjct: 208 IEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGC 267
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
NPD SYN +L +++ RL+ M P+ T+++++ R GR A
Sbjct: 268 NPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVN 327
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V E M+++G P +Y ++ C K+G+L+ A +Y E MV +G P
Sbjct: 328 VLEVMKEKGLTPDSYSYDPLISAFC-KEGRLDLAIEYLEKMVSDGCLP 374
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V G++P +Y + ++ +CK A F + + P V +Y+IL+R +
Sbjct: 227 LVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSR 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +L +M+ C +++ H+ L+ + C+ G + EA +L M+ G PD++SY
Sbjct: 287 WEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDP 346
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC+ + L+ M +P++ YN I+ LCK + A + +++ E G
Sbjct: 347 LISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVG 406
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN + + AL +I+ M ++ + PD TYN ++ L R G D A
Sbjct: 407 CPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAI 466
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ME F P+V ++++++ G+CK ++ E + MV++G P ++ +L
Sbjct: 467 GLLVDMEATRFQPTVISFNIVLLGMCKAH-RVFEGIELLITMVEKGCLPNETSYVLL 522
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
LL C+AG +E+ L + S G +PD + I F + ++ RV++ ++ Y
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+V++YN +I K +++ A Q+ D M RG +PD +YN ++ C R ++ +A
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ + K+ P TY ++++ + GR + A E+++ + RG P + TY+ ++ G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K+G + A + + G P
Sbjct: 247 C-KEGMEDRALDFVRHLSARGCNP 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G +P++ L+ + C+ V+ A + K + TP +Y L+ G
Sbjct: 297 MVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGR 356
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + ++M+ C DI+ +N++L +CK G D A + ++ +G P +Y+
Sbjct: 357 LDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNT 416
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
A + ++ M R + P+ TYN +I LC++ V+EA LL +M
Sbjct: 417 MFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATR 476
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P S+N +L C V + L+ M ++ +P+ +Y ++++ + G A
Sbjct: 477 FQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAM 536
Query: 240 EVWESMEKRG 249
E+ S+ + G
Sbjct: 537 ELANSLYRLG 546
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 154/299 (51%), Gaps = 6/299 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P+ + +L LC++ + A +FD+ P V Y+I++ G +G++ EA
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L+ + ++ I+ NSL+ CK + EA +L ++ G EP A +Y+ ++A+
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAY 511
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
CE +I+ + +L M ++ P V TY +I+ LCK K+EE+ QLL++M +G PD+
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQ 571
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN I+ C ++ A L+ M N+ P TYN+++ L R G + A V S
Sbjct: 572 ITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVS 631
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEMLRNR 299
++ R + Y+ M+ C KG + A K F MV++G I YS+ + L R
Sbjct: 632 LQDRNINLTKVAYTTMIKAHC-VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKR 689
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 158/300 (52%), Gaps = 3/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+++GI P Y + L+H L ++ A + D K P + TY I+ +G +G
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270
Query: 60 LSEARKLFDEML-ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+S AR++ +ML + D++ + L+ C+ GNI+EA + R++ S G + + YS
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + + C+ + ++L M+ NL P++ TY+ +I LCK KV++A QL EM
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ ++++ IL C++ ++ A + N+ PD YN+++ V++G + A
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ + + PS+ T++ +++G CK + K+ EA + E + G+ P + T L N
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNR-KVVEARRLLESIKLHGLEPSAVTYTTLMN 509
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + ++ LL +LCKR V A Q ++ + P + TYSIL+ GL G++ +A
Sbjct: 321 GFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQA 380
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L+ EM + + AH+ +L+ +C+ G + +A + PD Y+I I
Sbjct: 381 IQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDG 440
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + D+ R+ ++ + P++ T+N +I CKN KV EA +LL+ + G P
Sbjct: 441 YVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ +C+ +N L+ M +++ P TY +V+K L + + + + ++ E
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P TY+ ++ CK K + +A + + M+ + P +T +L + L
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAK-DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRY 619
Query: 304 GFL-DIIEILADKMERSTSCT 323
G + D +L +R+ + T
Sbjct: 620 GDVEDADRVLVSLQDRNINLT 640
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 148/311 (47%), Gaps = 38/311 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
I PSI + L++ CK + V A + ++ K H P+ TY+ L+ + G +++
Sbjct: 461 AITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKL 520
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + ++ + +++ +CK ++E+ +L +MR+ G PD +Y+ I
Sbjct: 521 HELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQC 580
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A D+ F +LD M +NL P TYN +I LC+ VE+A ++L + +R N
Sbjct: 581 FCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLT 640
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +Y ++ HC + + RA +V+
Sbjct: 641 KVAYTTMIKAHCVKGDAQ-----------------------------------RAVKVFH 665
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++GF S+ YS +++ LC K+ + EA YF +M+ +G+ P EM+ N
Sbjct: 666 QMVEKGFEVSIKDYSAVINRLC-KRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRA 724
Query: 304 GFL-DIIEILA 313
G + + E+LA
Sbjct: 725 GHVHSVFELLA 735
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + TY++L+ G +G + EA +L ++L ++++ ++ LL ++CK G +DEA +
Sbjct: 289 PDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQL 348
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM + +PD +YSI IH C+ + ++ M + PN F ++ I++ LC+
Sbjct: 349 LYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCE 408
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ +A D +I PD YN ++ + +V A+RL R+ + + P T
Sbjct: 409 KGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVT 468
Query: 222 YNMVL-------------KLLVRV----------------------GRFDRATEVWESME 246
+N ++ +LL + G ++ E+ M
Sbjct: 469 FNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN 528
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ P+V TY+V++ GLCK++ KLEE+ + E M +G+ P
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQR-KLEESVQLLEDMRAKGLAP 569
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 140/291 (48%), Gaps = 3/291 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ + ++ CK VA FF K+ P +Y+IL+ GL G + EA +L
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYSIFIHAFC 125
++M ++ D++ + + + G + A ++++M + G +PD +Y++ I C
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ +I R+ + NV Y+ ++ LCK +V+EA QLL EM PD
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+ ++ C + +V A++L M + P+ ++ +LK L G A ++S+
Sbjct: 363 TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P V+ Y++M+ G K G +EEA + ++ + D+ I P T L
Sbjct: 423 IMSNLRPDVTLYNIMIDGYV-KLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 144/291 (49%), Gaps = 3/291 (1%)
Query: 16 LLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LC + + A F N EF P+V +++ ++ +G A+ F ML+
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D ++N L+ + AG+++EA + +M G +PD +Y I F +
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275
Query: 135 RVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
++ M L P++ TY +I C+ +EEA +L +++ G + Y+ +L+
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C R +V+ AL+L+ M N+ PD TY++++ L + G+ +A ++++ M +P+
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+S ++ GLC +KG L +A YF+ ++ + P + ++ + V LG
Sbjct: 396 SFAHSGILKGLC-EKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++PS L++A C+ ++ H+ + + PTV TY+++++GL +L E+
Sbjct: 496 GLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEES 555
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ++M + D + +N++++ CKA ++ +A +L +M EP +Y++ I
Sbjct: 556 VQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDG 615
Query: 124 FCEANDIHSVFRVLDSM--KRYNLVPNVFT------------------------------ 151
C D+ RVL S+ + NL +T
Sbjct: 616 LCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVS 675
Query: 152 ---YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
Y+ +I +LCK + EA M+ G +PD+ + +L V+ L+
Sbjct: 676 IKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLA 735
Query: 209 RMTKENVMPD 218
M K ++ D
Sbjct: 736 VMIKFGLLHD 745
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 34/192 (17%)
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNC--------------------------------IIR 157
+H VL MK NL P++ TYN I+
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
LC + +A L + + P S+N I++ +C ++A M K ++P
Sbjct: 159 GLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILP 218
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D ++YN+++ L+ G + A E+ MEK+G P + TY ++ G G + A +
Sbjct: 219 DTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGF-HLLGLMSGAREI 277
Query: 278 FE-MMVDEGIPP 288
+ M+ DEG+ P
Sbjct: 278 IQKMLTDEGLKP 289
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+ EFG P++ L+ CK+ ++ A FF+ K +TY++L+ GL G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +++++M E ++ +N ++ +CK G +A + EMR G + +Y+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ +V+D MK + PN+ TYN +I C K+ +A L ++ RG
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN +++ C + + + A +++ M + + P + TY +++ R ++A
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ SME+ G P V TYSV++HG C KG++ EA + F+ MV++ P
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFC-IKGQMNEASRLFKSMVEKNCEP 476
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 155/296 (52%), Gaps = 1/296 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G P + LL + FF+ K + V ++ IL++G + GE+
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++ L E+ E +++ + +L++ CK G I++A + EM +G + +Y++
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ + F + + M+ + PN++TYNC++ +LCK+ + ++A+Q+ DEM ERG
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ + +YN ++ C ++N A +++ +M + + P+ TYN ++ VG+ +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ RG PS+ TY+++V G C +KG A K + M + GI P T +L
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFC-RKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 160/297 (53%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P++Y + +++ LCK K A Q FD + + + TY+ L+ GL +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA K+ D+M +++ +N+L++ C G + +A + R+++S G P +Y+I
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC D +++ M+ + P+ TY +I +++ +E+A QL M E G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C + ++N A RL M ++N P+ YN ++ + G RA
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + ME++ P+V++Y M+ LCK++ K +EA + E M+D GI P +S + ++
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKER-KSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 27 KVAHQFFDNAK--HEFTP--TVKT----YSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
K+ QFF ++ H T T KT Y +++ L+ + F+EM++
Sbjct: 69 KIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPG 128
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
N LL + + + ++ E +S D +S+ I I CEA +I F +L
Sbjct: 129 SNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+ + PNV Y +I CK ++E+A L EM + G +E +Y ++
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ +M ++ V P+ +TYN V+ L + GR A +V++ M +RG ++ TY+
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
++ GLC++ KL EA K + M +GI P T L + G+G L
Sbjct: 308 TLIGGLCREM-KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L ++M K D++ N++++++CK ++D+A + +EM + G P+ +YS
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M + PN+ T+N +I K K EA +L D+MI+R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C ++ A ++ M ++ PD TYN ++K + R + T
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ GL G + A K F+ MV +G+PP T +L +
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + D M++S
Sbjct: 480 LCNNGKLEKALEVFDYMQKS 499
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ +LCK +HV A F + + P V TYS L+ L G S+A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+E+K +++ N+L++A K G EA + +M +PD F+Y+ ++ F
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK+++VE+ +L EM RG D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + A ++ +M + V PD TY+++L L G+ ++A EV++
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+K + Y+ M+ G+C K GK+++ F + +G+ P
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMC-KAGKVDDGWDLFCSLSLKGVKP 538
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A Q D + + P + T++ L+ G+ EA
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+D+M++R DI +NSL+ C +D+A M M S PD +Y+ I
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M LV + TY +I+ L + + A ++ +M+ G PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ ++ AL + M K + D + Y +++ + + G+ D +++
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ GLC K+ L+EA + M ++G P S T L
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPNSGTYNTL 581
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P I+ + L++ C + A Q F+ + P V TY+ L++G
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R D + + +L++ + G+ D A + ++M S G PD +YSI
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + V D M++ + +++ Y +I +CK KV++ + L + +G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C + + A L+ +M ++ +P+ TYN +++ +R G +
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ M F ST ++ + L G+L+++
Sbjct: 596 ELIREMRSCRFVGDASTIGLVANML--HDGRLDKS 628
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M + + +N L+ C+ I A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R + ++AL L+ +M + D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+N ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDM 321
Query: 282 VDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
+++ I P T L + V G F++ ++ D ++RS
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K A + +D+ K P + TY+ LV G
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+++F+ M+ + C D++ +N+L++ CK+ +++ + REM G D +Y+
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I D + +V M + P++ TY+ ++ LC N K+E+A ++ D M +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + Y ++ C +V+ L ++ + V P+ TYN ++ L A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ + M++ G P+ TY+ ++
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLI 582
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL D+ +L +A LF M++ + I+ N LL A+ K D + +M+ +
Sbjct: 56 ILRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
++Y+I I+ FC + I +L M + P++ T + ++ C +++ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD ++ ++ + + A+ L+ RM + P+ TY +V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME V ++ ++ LCK + +++A F+ M +GI P
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR-HVDDALNLFKEMETKGIRP 293
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L + L G + D ++L+D +E+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y I+R + K+++A L M++ P +N +L+ + ++ + L +M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ ++ +TYN+++ R + A + M K G+ PS+ T S +++G C K ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RI 171
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A + MV+ G P + T L
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTL 196
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 145/296 (48%), Gaps = 13/296 (4%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
+FG+ PS++ + L++++CK + A F+N H+ P TYSIL+ G+L
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +M E + ++SL+ CK G + A + EM + G +P+ Y+ I
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+C+ ++H+ FR+ M + PN +T+ +I LC ++ EA +L EM+E
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+E +YN ++ HC A L+ M ++ ++PD +TY ++ L GR A E
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 242 WESM--------EKRGFYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIP 287
+ E G P+V TY+ +++GLCK K E C+ EM+ +P
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCR--EMLASNSLP 641
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 138/274 (50%), Gaps = 10/274 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE+ + P+ + L+ CK + A + D + P TY L+ GL G
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 60 LSEARKLFDEMLERK--------CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE 111
+SEAR+ +++ + C +++ + +L+ +CK G +D+A + REM + +
Sbjct: 581 VSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 640
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P+ +Y+ F+ +I ++ D + + N TYN +IR CK +++EA ++
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEV 699
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
L MI+ G +PD SY+ I+ +C R ++ A++L M V PD YN ++
Sbjct: 700 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCV 759
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
G +A E+ + M +RG P+ +TY+ ++HG C
Sbjct: 760 TGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 23/303 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLG 55
M+ G+KP++ L+ CK + A + + HE T P T++ L+ GL
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLY----HEMTGKGISPNTYTFTALISGLC 506
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
++EA KLF EM+E + + +N L+E CK GN A +L EM G PD +
Sbjct: 507 HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTY 566
Query: 116 SYSIFIHAFCEA----------NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+Y I C ND+ + L+ ++ +PNV TY +I LCK +
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE--GCLPNVVTYTALINGLCKIGLM 624
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++A L EM+ + P++ +Y L Y + A++L + E + + TYN++
Sbjct: 625 DKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNIL 683
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ ++GR A EV +M G P +YS +++ C ++G L+EA K +E M++ G
Sbjct: 684 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC-RRGDLKEAIKLWESMLNRG 742
Query: 286 IPP 288
+ P
Sbjct: 743 VNP 745
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++ + L+ LCK + + + + + F P+ S LV GL G + A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +++ + + +N+L+ +MCK G +DEA + M G P+ +YSI I +
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + L M + V+ Y+ +I CK K+ A L DEMI G P+
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++++ +C E++ A RL MT + + P+ +T+ ++ L R A +++
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + P+ TY+V++ G C K+G A + + MV++G+ P + T L + L
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHC-KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578
Query: 304 G 304
G
Sbjct: 579 G 579
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
+V G++P +Y ++ +LC+ K A + + +V TY++ +RGL
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ + + + D+ + +L+ +CK + M+ EM G P + S
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + +I S F +++ +K++ + P++F YN +I +CK+ K++EA L + M +G
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ +Y+ ++ C R ++++AL + +MT+ + + Y+ ++ ++G+ A
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAK 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M G P+V Y+ ++ G C K+G+L A + + M +GI P + T L
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYC-KEGELHNAFRLYHEMTGKGISPNTYTFTAL 501
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P ++T S ++ GL + + A LFDE++ D+ + +++ ++C+ + A +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ M S G + +Y++FI C+ + + + + L +V TY ++ LCK
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
E+ E ++++EMIE G P E + + ++ + + A L+ ++ K V P
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ + + G+ D A ++ +M +G +P+ TYS+++ C K+GKL+ A + M
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC-KRGKLDVALHFLGKM 416
Query: 282 VDEGIP----PYSSTVE 294
+ GI PYSS +
Sbjct: 417 TEVGIKATVYPYSSLIS 433
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P I L +L+ L + + ++A FD P V Y+ +VR L ++ +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
AR++ M C + + +N + +CK + EA + + G D +Y
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +++ M + VP+ + ++ L K + A+ L++++ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + YNA++ C +++ A L M + + P+ TY++++ + G+ D A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + G +V YS ++ G C K GKL A F+ M+ G+ P
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHC-KLGKLRAAKSLFDEMIANGLKP 458
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---------FTPTVKTYSILV 51
MVE G+ P Y L+ LC V A +F ++ + E P V TY+ L+
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALI 615
Query: 52 RGLGDVGELSEARKLFDEMLERK---------CPVDILA--------------------- 81
GL +G + +A L EML C +D L
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA 675
Query: 82 ----HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+N L+ CK G I EA +L M G PD SYS I+ +C D+ ++
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+SM + P+ YN +I C ++ +A++L D+M+ RG P+ +YN+++ C
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 795
Query: 198 AEVN 201
+ V+
Sbjct: 796 SSVS 799
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 18/298 (6%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
++VR + D G L + R L + +L + + A + E+ S
Sbjct: 166 VVVRLMMDCGILPQIRTL----------------SGVLNGLIRIRQFRMALHLFDEIVSS 209
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD + Y+ + + CE D V+ M+ +V TYN IR LCKN++V EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++ + + +G D +Y ++ C E ++ M + +P + ++
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G A ++ ++K G PS+ Y+ +++ +CK GKL+EA F M +G+ P
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD-GKLDEAESLFNNMGHKGLFP 388
Query: 289 YSSTVEMLRNRLVGLGFLDI-IEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
T +L + G LD+ + L E T+ ++ + G K R+ ++
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ CK ++ A + N +P +YS ++ G+L EA KL++ ML R
Sbjct: 683 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 742
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
D +A+N L+ C G + +A + +M G +P+ +Y+ IH C + + S
Sbjct: 743 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 801
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 42/369 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA---HQFFDNAKHEF----TPTVKTYSILVRG 53
M + G P+ L+ LC+ +V +A H+ N ++ P V TYSI++ G
Sbjct: 187 MQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDG 246
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L VG EA++LF+EM + D++++++L+ C AG D++ + EM G +PD
Sbjct: 247 LCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPD 306
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++S+ I C+ + ++L+ M + +VPN+ TYN +I C + A +L
Sbjct: 307 MVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFL 366
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M +G PDE SY ++ +C +V A+ L M + P+ TY +LK L + G
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG 426
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------- 266
+ A +++ M+ G + Y + + GLCK
Sbjct: 427 KVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYS 486
Query: 267 -------KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
K GKLE A + FE + EG+ P T ++ + +G +D IL +KME +
Sbjct: 487 CLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEEN 546
Query: 320 TSCTIQELA 328
CT +A
Sbjct: 547 -GCTPDIIA 554
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 144/289 (49%), Gaps = 8/289 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ L+ LC + A + F K TP TY L++GL G ++ A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215
Query: 64 RKLFDEMLER------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
KL EML C ++ ++ +++ +CK G DEA + EM++ G PD SY
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S IH FC A + D M + P++ T++ +I LCK KV EA +LL+ MI+
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +YN+++ C ++N A L M + + PD +Y ++ + +
Sbjct: 336 RGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKE 395
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
A ++ M + G P+V+TY ++ GL +KGK+ +A K F +M G+
Sbjct: 396 AMNLYNEMLQVGKSPNVTTYGTLLKGL-FQKGKVGDAKKLFGVMKTYGV 443
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G++P + L+ LCK V A + + + P + TY+ L+ G VG+
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ AR+LF M + D +++ +L+ CK + EA + EM +G P+ +Y
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + ++ MK Y + N Y + LCKN+ + EA +L +E+
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ A L ++++E + PD TYN+++ +VG+ D A
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E ME+ G P + Y+ ++ G C+ KLEE K MV + + P +++ ++ +
Sbjct: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGN-KLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596
Query: 300 L 300
L
Sbjct: 597 L 597
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 7/245 (2%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A FD M+ I + N LL + K + + + EMR G PD F+ SI
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C N + + + R +PNV TY +I+ LC ++ EA +L M + G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTYNMVLKLLVRVGRF 235
P+ +Y ++ C VN+AL+L M + N P TY++++ L +VGR
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A E++E M+ +G P V +YS ++HG C GK +++ F+ MVD+G+ P T +
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFC-CAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312
Query: 296 LRNRL 300
L + L
Sbjct: 313 LIDTL 317
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 10/296 (3%)
Query: 21 CKRKHVKV--AHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV 77
CK ++ A FFD + P + +++ L+ GL + S+ L++EM
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D+ + L +C + EA + + G P+ +Y+ I C + I R+
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI----ERGAN--PDEWSYNAIL 191
M++ PN TY +I+ LC+ V A +L EM+ + G N P +Y+ I+
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C + A L M + ++PD +Y+ ++ G++D++ +++ M +G
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
P + T+SV++ LC K+GK+ EA K E+M+ GI P T L + +G L+
Sbjct: 305 PDMVTFSVLIDTLC-KEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 1/238 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P L++ CK VK A ++ + +P V TY L++GL G++ +A
Sbjct: 372 GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+KLF M + + L+ +CK + EA + E++S + + +YS I
Sbjct: 432 KKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDG 491
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A + + + + + + + L P+V TYN +I CK +V+ A L ++M E G PD
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+YN +L C+ ++ ++L+ +M +++V P+ + +V+ +L + ++ + ++
Sbjct: 552 IIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M +G+ + L LCK + A + F+ K + F ++ YS L+ GL G+
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF+++ + D++ +N ++ CK G +D A+ + +M G PD +Y+
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ FCE N + V ++L M + ++ PN + ++ LCK+EK ++ LL +
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 4/345 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M +F +P+ L+ A H + F + + PTV ++ L+RG G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L DEM DI+ +N +++ K G +D A E+ + G +PD +Y+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+AN + + + +++ VP + YN +I K +EAY LL+ +G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P +YN IL +V+ AL++ M K++ P+ TYN+++ +L R G+ D A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ +SM+K G +P+V T ++MV LCK + KL+EAC FE M + P T L +
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQ-KLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEE 344
L +G +D + +KM S C + K F R E+
Sbjct: 457 LGKVGRVDDAYKVYEKMLDS-DCRTNSIVYTSLIKNFFNHGRKED 500
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 158/303 (52%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ P + L+ + + K + F+ K F P ++YSIL+ GL G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+E +LF M E+ C +D A+N +++ CK G +++A+ +L EM++ G EP +Y
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +L+E++++G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N++L E+N AL M + P++ TY +++ L +V +F++A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPP---YSSTVEM 295
W+ M+K+G PS +Y+ M+ GL K G + EA F+ + G+P Y++ +E
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLA-KAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 296 LRN 298
L N
Sbjct: 807 LSN 809
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 178/402 (44%), Gaps = 72/402 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M + G+ P++ ++ ++ LCK + + A F+ ++ TP T+ L+ GLG VG
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------------------------- 85
+ +A K++++ML+ C + + + SL
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 86 -LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ M KAG ++ M E+++ PDA SYSI IH +A + + + SMK
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL-----------AY 193
V + YN +I CK KV +AYQLL+EM +G P +Y +++ AY
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 194 ------HCDRAEVNM------------------ALRLITRMTKENVMPDRHTYNMVLKLL 229
R E+N+ A ++ + ++ + P+ +T+N +L L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ + A ++SM++ P+ TY ++++GLCK + K +A +++ M +G+ P
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR-KFNKAFVFWQEMQKQGMKPS 761
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
+ + + + L G + L D+ + + NAM
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ CK V A+Q + K + F PTV TY ++ GL + L EA LF+E ++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++++ ++SL++ K G IDEA+ +L E+ G P+ ++++ + A +A +I+
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
SMK PN TY +I LCK K +A+ EM ++G P SY +++
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ A L R +PD YN +++ L R A ++E +RG
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 255 STYSVMVHGLCKKKGKLEEA 274
T V++ L K LE+A
Sbjct: 833 KTCVVLLDTL-HKNDCLEQA 851
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P+V T +V G +L E + M + K A+ +L+ A + D
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++M+ +G EP ++ I F + + S +LD MK +L ++ YN I
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K KV+ A++ E+ G PDE +Y +++ C ++ A+ + + K +P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ YN ++ G+FD A + E +G PSV Y+ ++ L +K GK++EA K FE
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL-RKMGKVDEALKVFE 367
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
M + P ST +L + L G LD L D M+++
Sbjct: 368 EMKKDAAPNL-STYNILIDMLCRAGKLDTAFELRDSMQKA 406
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 135/296 (45%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K V A + F+ K + P + TY+IL+ L G+L A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L D M + ++ N +++ +CK+ +DEA M EM PD ++ I
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + ++V + M + N Y +I+ + + E+ +++ +MI + +PD
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E + + +PD +Y++++ L++ G + E++ S
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y++++ G C K GK+ +A + E M +G P Y S ++ L
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFC-KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 5/241 (2%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEA 98
F P + ++R L DV E + ++ E CP ++NSLL M + N D
Sbjct: 61 FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPE---SYNSLLLVMARCRNFDAL 117
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+L EM G P + + +AN + + V+ M+++ P Y +I
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+ L +M E G P + ++ V+ AL L+ M ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
YN+ + +VG+ D A + + +E G P TY+ M+ LCK +L+EA + F
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN-RLDEAVEMF 296
Query: 279 E 279
E
Sbjct: 297 E 297
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 155/289 (53%), Gaps = 12/289 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+P + + ++ ALC K+V A F ++ P V TY+ L+R L + G S+A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK +++ ++L++A K G + EA + EM +PD F+YS I+ F
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + + + M + PNV TYN +I+ CK ++V+E +L EM +RG +
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 185 WSYNAIL-----AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ A CD A++ + +M + V+PD TY+++L L G+ + A
Sbjct: 432 VTYTTLIHGFFQARECDNAQI-----VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E +++ P + TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 534
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 146/293 (49%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TY +I + + + A + +M+ G PD
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ +V AL + + + + PD +TYN++++ + + G+ + +++
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ G C +KG EEA F M +EG P S T L
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFC-RKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P + + L+H L + A D P + TY I+V GL G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + K ++ +N++++A+C N+++A + EM + G P+ +Y+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T++ +I K K+ EA +L DEMI+R
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TYN ++K + R D
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + + A F+ MV +G+ P T +L +
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-ECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ ++ + ++RS
Sbjct: 476 LCNNGKVETALVVFEYLQRS 495
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L+ LL+ C + A + + P T++ L+ GL
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ + C D++ + ++ +CK G+ID A +L++M EP Y+
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C +++ + M + PNV TYN +IR LC + +A +LL +MIER
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E M + +P+V TY+ ++ G CK K +++E + F M G+ + T L
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAK-RVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI + +LL A+ K + + ++ + + TYSIL+ +LS A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ DI+ NSLL C I +A ++ +M +G +PD+F+++ IH
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N ++D M P++ TY ++ LCK ++ A LL +M + P
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN I+ C+ VN AL L T M + + P+ TYN +++ L GR+ A+ + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 319 ERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 1/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ L+ A K + A + +D K P + TYS L+ G
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+ +F+ M+ + C +++ +N+L++ CKA +DE + REM G + +Y+
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +A + + V M ++P++ TY+ ++ LC N KVE A + + +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN ++ C +V L ++ + V P+ TY ++ R G + A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
++ M++ G P TY+ ++ + K A
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D K P++ +S L+ + + + L ++M ++ ++ L+ C+
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EPD + + ++ FC N I ++ M P+ FT
Sbjct: 129 RSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N +I L ++ + EA L+D M+ +G PD +Y ++ C R ++++AL L+ +M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P YN ++ L + A ++ M+ +G P+V TY+ ++ LC G+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRW 307
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + V G L E L D+M +RS I ++
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 331 MRG 333
+ G
Sbjct: 368 ING 370
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF +M++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + + VL M + P++ T N ++ C ++ +A L+ +M+E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +++N ++ + A+ L+ RM + PD TY +V+ L + G D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + ME+ P V Y+ ++ LC K + +A F M ++GI P T L
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYK-NVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 300 CLCNYGRWSDASRLLSDMIER 320
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ Y I + +++ A+ L M K P ++ +L + ++ +FD + E
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV-GL 303
M+ G ++ TYS++++ C++ +L A M+ G P T+ L N G
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 304 GFLDIIEILADKME---RSTSCTIQELANAMRGKTGFRKSRSEET 345
D + ++ +E + S T L + + FR +R+ E
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGL-----FRHNRASEA 205
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P+ Y ++ CK V A + FD K E P Y+ L+ G D G+L
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A D M+ER + + +N L+ A+ G EA+ ++ EM G D F+Y+I I+
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ + ++M R + V TY +I L K +V+E +L DE + RG P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ H ++ A ++ M K+ + PD TYN +++ L +GR D A ++
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M KRG P + TY+ ++ G KG +++A + M+++G P
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGY-SMKGDVKDALRIRNEMMNKGFNP 500
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ ++ + L+HAL A++ + V TY+IL+ G G
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGN 342
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ M R ++ + SL+ A+ K G + E + E G PD Y+
Sbjct: 343 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 402
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ + +I F ++ M++ + P+ TYN ++R LC +V+EA +L+DEM +RG
Sbjct: 403 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 462
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +++ + + +V ALR+ M + P TYN +++ L + G+ D A
Sbjct: 463 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 522
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M + G P STY ++ GL
Sbjct: 523 NMVKEMVENGITPDDSTYISLIEGL 547
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 120/228 (52%), Gaps = 7/228 (3%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A LF +M + P+ N +L +C AG A +LR+M P+A +Y+
Sbjct: 136 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTV 191
Query: 121 IHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + ++ M+ R + PN +TY +I CK +V+EA ++ DEM+ +G
Sbjct: 192 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 251
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ YNA++ +CD+ +++ AL RM + V TYN+++ L GR A
Sbjct: 252 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 311
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ E M +G V TY+++++G C K+G +++A + FE M G+
Sbjct: 312 YELVEEMGGKGLALDVFTYNILINGHC-KEGNVKKALEIFENMSRRGV 358
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H A F + M R L T+N ++R LC K A +LL +M
Sbjct: 126 LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----P 181
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++A C R V AL ++ M + + P+++TY V+ +VGR D A
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 240 EVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V++ M +G P Y+ ++ G C +GKL+ A Y + MV+ G+ +T +L
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLL 298
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N +L + C + AL L+ +M + N + TYN V+ GR A ++ M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 211
Query: 246 EKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVG- 302
+RG P+ TY ++ G C K G+++EA K F+ M+ +G + P + ++ N L+G
Sbjct: 212 RERGGIAPNQYTYGTVISGWC-KVGRVDEAVKVFDEMLTKGEVKPEA----VMYNALIGG 266
Query: 303 ---LGFLDIIEILADKM-ERSTSCTI 324
G LD + D+M ER + T+
Sbjct: 267 YCDQGKLDTALLYRDRMVERGVAMTV 292
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G +P + ++ +LCK + V A F K + +P + TY+ L++GL +
Sbjct: 36 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + +EM+ +I+ + L+ CK GN+ EA G+L+ M +G EP+ +YS
Sbjct: 96 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + ++ ++ D M P+VF+YN +I CK +++ EA QL +EMI +G
Sbjct: 156 LMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 215
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ C + A L M +PD TY+++L + G +A
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 275
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ +M+ P++ Y++++ +CK + L+EA K F + +G+ P
Sbjct: 276 RLFRAMQSTYLKPNMVMYNILIDAMCKSR-NLKEARKLFSELFVQGLQP 323
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G +P ++ +++ LCK + V A F + P V TYS ++ L
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA +F M + +I +NSL++ +C EA ML EM S+ P+ ++S+
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ ++ VL +M + PNV TY+ ++ +V EA +L D MI +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +SYN ++ +C + A +L M + + PD +YN ++ L ++GR A
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++++M G P + TYS+++ G C K+G L +A + F M + P
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFC-KQGYLAKAFRLFRAMQSTYLKP 288
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P V TY+ ++ GL +GE A LF +M E C D++ ++++++++CK ++EA
Sbjct: 6 YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ M++ G P+ F+Y+ I C + +L+ M N++PN+ T++ +I
Sbjct: 66 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK V EA +L M E G P+ +Y++++ + +AEV A +L M + PD
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+YN+++ + R A +++ M +G P + +Y+ ++ GLC+ G+L EA F+
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL-GRLREAHDLFK 244
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFL 306
M+ G P T +L + G+L
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGYL 271
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P++ L++ + V A + FD P V +Y+IL+ G
Sbjct: 141 MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++LF+EM+ + DI+++N+L++ +C+ G + EAH + + M + G PD +YSI
Sbjct: 201 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + FR+ +M+ L PN+ YN +I +CK+ ++EA +L E+ +G
Sbjct: 261 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 320
Query: 180 ANPD 183
P+
Sbjct: 321 LQPN 324
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P I + L+ LC+ ++ AH F N + P + TYSIL+ G G
Sbjct: 211 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A +LF M +++ +N L++AMCK+ N+ EA + E+ G +P+ + +
Sbjct: 271 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330
Query: 120 F 120
F
Sbjct: 331 F 331
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P ++ + +++A CK V A F ++ P + TY L+ G +G+
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYS 118
+ A+ + M E+ +++ + L++ CK +DEA +LR M+ A PD +Y
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I +C I R+LD M R L N+F N +I CK ++ EA ++ M++
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +SYN +L +C + A L +M +E + P TYN +LK L RVG FD A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 239 TEVWESMEKRGFYP-----------------------------------SVSTYSVMVHG 263
++W M KRG P S T++ M+ G
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
LC K GK+ EA + F+ M D G P T L
Sbjct: 517 LC-KMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 44/335 (13%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
EF P+++D+ +L ++ K A FDN K P++++ + L+ L GE
Sbjct: 151 EFAFSPTVFDM--ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 208
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A ++ +M+ D+ + ++ A CK G +DEA G +++M ++G EP+ +Y I
Sbjct: 209 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 268
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK-------------------- 161
+ + D+ + VL M + NV TY +I+ CK
Sbjct: 269 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328
Query: 162 ----------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
K+++A +LLDEM+ G + + N+++ +C R E++ A
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ITRM N+ PD ++YN +L R G A + + M + G P+V TY+ ++ GLC
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448
Query: 266 KKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ G ++A + + +M+ G+ P YS+ ++ L
Sbjct: 449 -RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 69/386 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV++ +KP Y + LL C+ H A D E PTV TY+ L++GL VG
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 60 LSEARKLFDEMLERKCPVD--------------------------ILAH---------NS 84
+A +++ M++R D ILA N+
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ +CK G + EA + +M+ +G PD +Y I +C+A+++ F+V +M+R
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P++ YN +I L K+ ++ E LL EM RG P+ +Y A++ C ++ A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP------------ 252
MT+ + + + ++ L R+GR D A + + M GF+P
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692
Query: 253 ------------SVST--------YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S T Y++ + GLC K GK+++A ++F M+ +G P + T
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 293 VEMLRNRLVGLGFLDIIEILADKMER 318
L + G +D L D+M R
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLR 777
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+K +++ + L++ CKR + A P +Y+ L+ G G
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+ML+ +L +N+LL+ +C+ G D+A + M G PD YS
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + T+N +I LCK K+ EA ++ D+M + G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ +C + V A ++ M +E + P YN ++ L + R T
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA-CKYFEMMVDEGIPPYSSTVEMLRN 298
++ M RG P++ TY ++ G C K+G L++A YFE M + G+ + +
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWC-KEGMLDKAFSSYFE-MTENGLSANIIICSTMVS 655
Query: 299 RLVGLGFLDIIEILADKM 316
L LG +D +L KM
Sbjct: 656 GLYRLGRIDEANLLMQKM 673
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 34/310 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+I L+ CK + K +F+ ++ + + S +V GL +G + EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Query: 64 RKLFDEM----------------------------LERKCPVDILAHNSL----LEAMCK 91
L +M L+ C +L +N + + +CK
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G +D+A + G PD F+Y IH + A ++ FR+ D M R LVPN+ T
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCK+E V+ A +L ++ ++G P+ +YN ++ +C ++ A +L +M
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+E + P TY+ ++ L + G +R+ ++ M K G + Y +V G + G++
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYI-RSGEM 905
Query: 272 EEACKYFEMM 281
++ K ++MM
Sbjct: 906 QKIHKLYDMM 915
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 112/222 (50%)
Query: 27 KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLL 86
K+A ++ K P Y+I + GL G++ +AR+ F + + D + +L+
Sbjct: 697 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
AGN+DEA + EM G P+ +Y+ I+ C++ ++ R+ + + L
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 816
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
PNV TYN +I CK ++ A++L D+MIE G +P +Y+A++ C ++ +++L
Sbjct: 817 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL 876
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+ +M K V Y +++ +R G + ++++ M R
Sbjct: 877 LNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I + L++ LCK ++V A + F + P V TY+ L+ G +G
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A KL D+M+E ++ +++L+ +CK G+I+ + +L +M G + Y
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 120 FIHAFCEANDIHSVFRVLDSM 140
+ + + ++ + ++ D M
Sbjct: 895 LVQGYIRSGEMQKIHKLYDMM 915
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
+VEFG LL LCK + K+A F+ K EF K Y+IL+ G + +
Sbjct: 173 LVEFGF---------LLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRI 223
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAG----------NIDEAHGMLREMRSIGA 110
A K EM+E +++ +N LL +C+ N+ A + EMR G
Sbjct: 224 DMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGI 283
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
EPD S+SI +H + A+ + MK + P + TY +++ LC ++EEA +
Sbjct: 284 EPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEE 343
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
LL+ M+E G +P +YN + R + N A+ L +M P TYN++L +
Sbjct: 344 LLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFI 403
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+G+ + E+W+ ++ P + +Y+ +VHGLC K+ K +EAC YF M++ G P
Sbjct: 404 NLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKE-KWKEACGYFVEMIERGFLPQK 462
Query: 291 STVEMLRNRLV 301
T E L L+
Sbjct: 463 LTFETLYKGLI 473
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 15/259 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----------RKHVKVAHQFFDNAKHE-FTPTVKTYSI 49
M+E GI+P++ + LL+ +C+ ++V+ A + FD + P V ++SI
Sbjct: 233 MIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSI 292
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
++ + M + I + S+++ +C G ++EA +L M G
Sbjct: 293 VLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESG 352
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
P + +Y+ F + D + + MK P+ TYN ++ K+E
Sbjct: 353 ISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVK 412
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++ D++ PD SY +++ C + + A M + +P + T+ + K L
Sbjct: 413 EIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGL 472
Query: 230 VRVGRFDRATEVWESMEKR 248
++ + W ++K+
Sbjct: 473 IQSNKM----RTWRRLKKK 487
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 4/174 (2%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P+I ++ LC + + + +P+ TY+ + + + A
Sbjct: 317 GISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGA 376
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+ +M C +N LL G ++ + ++++ PD SY+ +H
Sbjct: 377 MNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHG 436
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL---LDE 174
C M +P T+ + + L ++ K+ +L LDE
Sbjct: 437 LCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDE 490
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G KP+++ + ++ +CK ++ A F+ K P TY+ ++ G G VG
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + F+EM C D++ +N+L+ CK G + + REM+ G +P+ SYS
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ + + + M+R LVPN TY ++ CK + +A++L DEM + G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A++ CD + A L +M V+P+ +Y ++ V+ DRA
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ + M+ RG P + Y + LC + K+E A M ++GI
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLE-KIEAAKVVMNEMQEKGI 409
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L + + A Q F K P ++ + L+ +G+ ++
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N +++ MCK G+I+ A G+ EM+ G PD +Y+ I + +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK + P+V TYN +I CK K+ + + EM + G P+ S
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + AL+ M + ++P+ HTY ++ ++G A + + M
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G +V TY+ ++ GLC + +++EA + F MV G+ P ++ L + V +
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVE-RIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNM 359
Query: 307 DIIEILADKME 317
D L D+M+
Sbjct: 360 DRALELLDEMK 370
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 158/320 (49%), Gaps = 7/320 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP++ L+ A CK ++ A +F+ D + P TY+ LV +G
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS+A +L DEM + +++ + +L++ +C I EA + +M + G P+ SY+
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +A ++ +LD MK + P++ Y I LC EK+E A +++EM E+G
Sbjct: 349 LIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG 408
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ + Y ++ + + L L+ M + ++ T+ +++ L + +A
Sbjct: 409 IKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAI 468
Query: 240 EVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + + G + + Y+ M+ GLCK+ ++E A FE M +G+ P + L +
Sbjct: 469 DYFGRISNDFGLQANAAIYTAMIDGLCKED-QVEAATTLFEQMAQKGLVPDRTAYTSLID 527
Query: 299 RLVGLGFLDIIEILA--DKM 316
+ G ++++ LA DKM
Sbjct: 528 GKLKQG--NVVQALALRDKM 545
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 19/300 (6%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-----CPV-DIL---------- 80
++ F T+++Y I+ L +A ++ EM+ K C V D+L
Sbjct: 3 RNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPG 62
Query: 81 --AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++L + + +EA +M+ P S + +H F + R
Sbjct: 63 FGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFK 122
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M P VFTYN +I +CK +E A L +EM RG PD +YN+++ +
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++ + M + PD TYN ++ + G+ + E + M++ G P+V +YS
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+V CK+ +++A K++ M G+ P T L + +G L LAD+M +
Sbjct: 243 TLVDAFCKED-MMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQ 301
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 37/286 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G+ P+ + L+ A CK ++ A + D ++ V TY+ L+ GL DV
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF +M+ ++ ++ +L+ KA N+D A +L EM+ G +PD Y
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN-------------------------- 153
FI + C I + V++ M+ + N F Y
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELD 443
Query: 154 --------CI-IRKLCKNEKVEEAYQLLDEMI-ERGANPDEWSYNAILAYHCDRAEVNMA 203
C+ I LCKN+ V +A + + G + Y A++ C +V A
Sbjct: 444 IEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAA 503
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
L +M ++ ++PDR Y ++ ++ G +A + + M + G
Sbjct: 504 TTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G++ ++ L+ LC + +K A + F P + +Y+ L+ G
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L DEM R D+L + + + ++C I+ A ++ EM+ G + + F Y+
Sbjct: 359 MDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTT 418
Query: 120 FIHAFCEANDIHS--------------------------------VFRVLDSMKR----Y 143
+ A+ ++ + V + +D R +
Sbjct: 419 LMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDF 478
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
L N Y +I LCK ++VE A L ++M ++G PD +Y +++ + V A
Sbjct: 479 GLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQA 538
Query: 204 LRLITRMTKENVMPD-------RHTYNMVLKLLVRVG 233
L L +M + V ++T + L++ RVG
Sbjct: 539 LALRDKMAEIGVESGARFGDLCQNTIKLSLRMGARVG 575
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P++ + +L L K+ + + D +P V TY L+ G G+ +A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LFDEM+E+K ++ + L+ +C I EA M R MR+ G P+ ++Y+ + +
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + M L+PNV T+ +I LCK +++ A + L +M G P+
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ YN ++ +C ++ AL L + + K ++PD TY++++K L V R + A + +
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+K+GF P+ TY+ ++ G C K+G +E+A + M ++GI P T L
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYC-KEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ L+ C++ A + FD + + PTV Y+IL+RGL
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +F M ++ +N++++ CK ++ +A + +EM G P+ ++ I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ +++ S + L M + +VPN+F YNC+I CK + EA L E+ +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+ ++ C + A L+ M K+ +P+ TYN ++ + G ++A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV M ++G P++ T+S ++ G C K GK+E A + MV +G+ P
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLLP 471
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 141/275 (51%), Gaps = 2/275 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y + ++ CK HVK A + + + P V T+ IL+ GL E+ A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RK +M +I +N L++ CKAGN+ EA + E+ PD F+YSI I
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + +L MK+ +PN TYN +I CK +E+A ++ +M E+G P+
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ +C ++ A+ L T M + ++PD Y ++ + G A + +
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
M++ G +P+V T S ++ GLC K G++ +A K F
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLC-KDGRISDAIKLF 531
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 14/277 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M FG+ P+I+ + L+ CK ++ A KHE P V TYSIL++GL V
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L EM ++ + + +N+L++ CK GN+++A + +M G EP+ ++S
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+A + + + M L+P+V Y +I K+ +EA++L EM E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLI-------TRMTKENVM------PDRHTYNMVL 226
+P+ ++ + ++ C ++ A++L T +K N + P+ Y ++
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L GR +A++ + M G P V T V++ G
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQG 600
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K + P ++ ++++ GL G K++ +M+ R +++ + +L++ C+ G+
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+A + EM P Y+I I C + I + +M+ ++PN++TYN ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK V++A +L EM+ G P+ ++ ++ C E+ A + + M V+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ YN ++ + G A + +EK P V TYS+++ GLC ++EEA
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD-RMEEADG 389
Query: 277 YFEMMVDEGIPPYSSTVEML 296
+ M +G P + T L
Sbjct: 390 LLQEMKKKGFLPNAVTYNTL 409
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 132 SVFRVLDSMKRYNLVPNVFTY------------------------------NCIIRKLCK 161
SVF VL ++ PNVF N ++ L K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ + +++ +M+ RGA+P+ +Y ++ C + + A RL M ++ + P
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++++ L R A ++ +M G P++ TY+ M+ G C K +++A + ++ M
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC-KIAHVKKALELYQEM 289
Query: 282 VDEGIPPYSSTVEMLRNRL 300
+ +G+ P T +L + L
Sbjct: 290 LGDGLLPNVVTFGILIDGL 308
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT-------------- 46
M E G+ P+++ L L+ LCK + A + F T KT
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ L++GL G + +A K F +M D+ +++ +A ++ + + ++
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+G P++ Y + + E+ + S R
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESGYLKSALR 647
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 164/323 (50%), Gaps = 6/323 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G+K + L+ LC++ + A + F + E +P V TY+ +V GL +
Sbjct: 137 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRI 196
Query: 61 SEARKLFDEMLER-----KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
EA +LFD+M +R C D+++++++++A+CKA +D+A+ + MR++G P+
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+YS I C+ + +L MK N+ +N ++ L KN++ E+A Q + +
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
++ G P+ +YN + C V+ A R++ M + V PD TY+ ++ + GR
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D+A +V+ M P T+ ++HG + K K EA + E MV+ G P T +
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK-KSREAFRVHEDMVNAGFIPGLQTYNV 435
Query: 296 LRNRLVGLGFLDIIEILADKMER 318
L + + G ++ + KM+R
Sbjct: 436 LMDCVCGADSVESALEIYHKMKR 458
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 16/302 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G + + Y LL+A K K + AH+ P Y+ ++ G G++ +A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFSYSIFI 121
+L DEM ER +D+L H++L++ +C+ G IDEA L + +S+G E P+ +Y+ +
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFKSMGEECSPNVITYNTVV 187
Query: 122 HAFCEANDIHSVFRVLDSM-KRY----NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C+AN I + D M KRY P+V +Y+ +I LCK ++V++AY+ M
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +Y++++ C + L L+ M ++ + +N +L L + +
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
+A + +E + K G P+V TY+V VHGLC K G+++EA + MV+ + P YSS
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLC-KAGRVDEAYRILLEMVESKVTPDVITYSSI 366
Query: 293 VE 294
++
Sbjct: 367 ID 368
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 152/336 (45%), Gaps = 34/336 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G +I D + +LHAL K + A QFF+ K P V TY++ V GL G
Sbjct: 281 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ EM+E K D++ ++S+++ CKAG +D+A + M P ++
Sbjct: 341 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H F E FRV + M +P + TYN ++ +C + VE A ++ +M +
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ C V+ A + M +NV+P+ + ++++L + G D A
Sbjct: 461 RQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 520
Query: 240 EV----------------------------WESMEK----RGFYPSVSTYSVMVHGLCKK 267
V WE+ K GF +TYS+ V +C K
Sbjct: 521 SVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEIC-K 579
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
GK +EA + E MV +G+ P T + L GL
Sbjct: 580 AGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGL 615
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 37/332 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G +P + ++ ALCK + V A+++F + P V TYS L+ GL V SE
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L M E+ ++I+ N++L A+ K ++A + G +P+ +Y++ +H
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---------------------- 161
C+A + +R+L M + P+V TY+ II CK
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 394
Query: 162 -------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
++K EA+++ ++M+ G P +YN ++ C V AL +
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M ++ PD +TY +++ L R R D A E + ME P+ + +V LC K+
Sbjct: 455 KMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC-KQ 513
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G+++EAC + +V+ G P T ++L L
Sbjct: 514 GEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 134/287 (46%), Gaps = 9/287 (3%)
Query: 28 VAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
VA FF A K F T ++L+ EA +L E LE C + + + ++
Sbjct: 58 VAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTV 117
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ CKAG +D+A +L EM+ G + D +S I C I SM
Sbjct: 118 INGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-EC 176
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-----GANPDEWSYNAILAYHCDRAEV 200
PNV TYN ++ LCK +++EA +L D+M +R G PD SY+ ++ C V
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A RM P+ TY+ ++ L +V R E+ M+++GF ++ ++ M
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+H L K + E+AC++FE ++ G P T + + L G +D
Sbjct: 297 LHALWKNDEQ-EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVD 342
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 161/377 (42%), Gaps = 69/377 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+++ G KP++ + +H LCK V A++ + + + TP V TYS ++ G G
Sbjct: 316 LLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 375
Query: 60 LSEARKLFDEMLERKC---PVDIL--------------------------------AHNS 84
+ +A +F M+ +C PV + +N
Sbjct: 376 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 435
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ +C A +++ A + +M+ +PD +Y+ I C A + LD M+ N
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADN 495
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP---------------------- 182
+VPN + ++ LCK +V+EA +LD ++E G P
Sbjct: 496 VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAAS 555
Query: 183 ----------DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
D +Y+ +A C + + A+ +I +M + V PD TY VL+ L +
Sbjct: 556 KLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGL 615
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
R + A +E M RG P + TY++++ C +EA + FE MV G P + T
Sbjct: 616 DRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD-MADEAFRIFEAMVAAGFTPQAQT 674
Query: 293 VEMLRNRLVGLGFLDII 309
+ L + L G+ D++
Sbjct: 675 MRTLSSCLRDAGYQDLL 691
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + L+ + + K F+ K F P V +YSIL+ GL G
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +LF M E+ C +D A+N+ ++ CK+G +++A+ +L EM++ G +P +Y
Sbjct: 598 ARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGS 657
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K L NV Y+ +I K +++EAY +++E++++G
Sbjct: 658 VIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E+N AL M P+ TY++++ L RV +F++A
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIP---PYSSTVEM 295
W+ M+K+G P+ TY+ M+ GL K G + EA FE + G+P Y++ +E
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLA-KAGNIAEASSLFERFKANGGVPDSASYNAIIEG 836
Query: 296 L 296
L
Sbjct: 837 L 837
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M E G+ P++ ++ ++ LCK K + A F+ H+ +P T+ L+ GLG G
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L+++ML+ + + + SL+++ K G ++ H + +EM G PD +
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +A + + + +K +P+V +Y+ +I L K E Y+L M E+G
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN + C +VN A +L+ M + P TY V+ L ++ R D A
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E + G +V YS ++ G K G+++EA E ++ +G+ P T L +
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGF-GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Query: 300 LV 301
LV
Sbjct: 732 LV 733
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 7/304 (2%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K +F P Y+ L+ L V E LF +M E V + +++ + G +D
Sbjct: 191 KFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLD 250
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A +L EM+S D Y++ I F +A + ++ +K + L+P+ TY +I
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK +++EA ++ ++M + P ++YN ++ + + + A L+ R +
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P YN +L L + GR A +E M+K P++STY+V++ LC K G++E A K
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLC-KAGEVEAAFK 428
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADKMERSTSCTIQELANAMR 332
+ M + G+ P TV ++ +RL LD I E + K+ T L + +
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL- 487
Query: 333 GKTG 336
GK G
Sbjct: 488 GKQG 491
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K+ + A + F+ K + P + TY++L+ L GE+ A
Sbjct: 368 GCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAF 427
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ D M E +++ N +++ +CKA +DEA + M PD ++ I
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + +R+ + M + +PN Y +I+ K + E+ +++ EMI RG +PD
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
NA + E L + +PD +Y++++ LV+ G E++ +
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA 607
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y+ + G C K GK+ +A + E M +G P Y S ++ L
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFC-KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M E G + + + CK V A+Q + K + PTV TY ++ GL +
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDR 667
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF+E ++++ ++SL++ K G IDEA+ ++ E+ G P+ ++++
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A +I+ +MK PN TY+ +I LC+ K +A+ EM ++G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++A + A L R +PD +YN +++ L R A
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847
Query: 240 EVWESMEKRG 249
+++E +G
Sbjct: 848 KIFEETRMKG 857
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 76/355 (21%)
Query: 6 IKPSIYDLDQLLHALC-----KRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+K + D +L+ +C K V +A +FF K H P TY+ ++ L
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG---------- 109
L EA ++F++M + + A+N+++ AG DEA+ +L ++ G
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378
Query: 110 ------------------------AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
A P+ +Y++ I C+A ++ + F+V D+MK L
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
PNV T N +I +LCK +K++EA + + M + +PDE ++ +++ + V+ A R
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYR 498
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFD----------------------------- 236
L +M + +P+ Y ++K + GR +
Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVF 558
Query: 237 ------RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ ++E ++ RGF P V +YS+++HGL K G E + F M ++G
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV-KAGFARETYELFYAMKEQG 612
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P+ KT L+ +L E L M + K A+ +L+ A+ D
Sbjct: 159 FGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIML 218
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ +M+ +G E ++ I F + + +LD MK L ++ YN I
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K KV+ A++ E+ G PD+ +Y +++ C ++ A+ + +M + +P
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ YN ++ G+FD A + E + RG PSV Y+ ++ L KKG+L EA + FE
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL-GKKGRLGEALRTFE 397
Query: 280 MMVDEGIP---PYSSTVEML 296
M + P Y+ ++ML
Sbjct: 398 EMKKDAAPNLSTYNVLIDML 417
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 11/253 (4%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-----CPVDILAHNSLLEA 88
+NA F + KT +++ L ++++A F ERK CP A++SLL
Sbjct: 83 ENALSLFVESPKT-DLVIGVLRRAKDVNQAISYF-RWTERKTDQALCPE---AYDSLLLV 137
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
M K D +L EM G P + I + ++N + F ++ M+++ P
Sbjct: 138 MAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPA 197
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
Y +I L ++ + L +M E G + ++ ++ AL L+
Sbjct: 198 FSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLD 257
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + D YN+ + + G+ D A + + ++ G P TY+ M+ LCK
Sbjct: 258 EMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317
Query: 269 GKLEEACKYFEMM 281
+L+EA + FE M
Sbjct: 318 -RLDEAVEIFEQM 329
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 7/172 (4%)
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++L M P+ T +I K+ K+ E + L+ M + P +Y ++
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
E ++ L L +M + H + V+++ R GR D A + + M+ + +
Sbjct: 209 SSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADI 268
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML--RNRL 300
Y+V + K GK++ A K+F + G+ P Y+S + +L NRL
Sbjct: 269 VLYNVCIDCF-GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRL 319
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P I ++L+H LCK+ +V+ + + F K P + T++I ++GL G
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L + ++ D++++N+L+ CK + EA L +M + G EP+ F+Y+
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC------------------- 160
I+ FC+A + + ++L +P+ FTY+ +I LC
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 161 ----------------KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
K V +A QL+ +M+E G +PD W+YN ++ C ++ A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ + +PD T+N ++ + D+A E+ ++M G P V TY+ +++GL
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
CK + KL+ F+ M+++G P T +L
Sbjct: 507 CKAR-KLDNVVDTFKAMLEKGCTPNIITYNIL 537
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 160/324 (49%), Gaps = 9/324 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH---EFTPTVKTYSILVRGLGDV 57
M + GI P +Y + + C A + +N EF +Y ++ G
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV--SYCAVISGFYKE 194
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
EA LFDEML++ DIL N L+ +CK GN+ E+ + ++ G P+ F++
Sbjct: 195 NCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF 254
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+IFI C I R+L+S+ L P+V +YN +I CK+ K+ EA L +M+
Sbjct: 255 NIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+E++YN I+ C + A +++ + +PD TY+ ++ L G +R
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 238 ATEV-WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A V +E+MEK GF S+ Y+ +V GL K+G + +A + + M++ G P T ++
Sbjct: 375 AMAVFYEAMEK-GFKHSIILYNTLVKGL-SKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432
Query: 297 RNRLVGLGFL-DIIEILADKMERS 319
N L +G L D IL D + +
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKG 456
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 155/325 (47%), Gaps = 40/325 (12%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
+E G K SI + L+ L K+ V A Q D +H +P + TY+++V GL +G L
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S+A + ++ + + C DI N+L++ CK N+D+A +L M S G PD +Y+
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++ C+A + +V +M PN+ TYN +I CK+ KV EA +L EM RG
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 181 NPD-------------------------------EWSY-----NAILAYHCDRAEVNMAL 204
PD ++SY N ++ C++ V+MA
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA-TEVWESMEKRGFYPSVSTYSVMVHG 263
+L +M + PD +TY +++ + G D A T + E++ K G PS +T +++
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK-GLVPSFTTCGKVLNC 681
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LC +L EA +MV GI P
Sbjct: 682 LCVTH-RLSEAVVIINLMVQNGIVP 705
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 153/306 (50%), Gaps = 3/306 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L++ LC + A F++ + F ++ Y+ LV+GL G + +A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M+E C DI +N ++ +CK G + +A+G+L + + G PD F+++ I
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ +LD+M + + P+V TYN ++ LCK K++ M+E+G P+
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C +V+ A+ L M + PD T ++ L G D+A E++
Sbjct: 531 IITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV 590
Query: 244 SMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++EK F S + +++M++ C+K + A K F M P + T ++ +
Sbjct: 591 TIEKEYKFSYSTAIFNIMINAFCEKL-NVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649
Query: 303 LGFLDI 308
G +D+
Sbjct: 650 TGNIDL 655
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y ++R G G++ EA +F+ M C + ++N+++ + + G +AH + M
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ IG PD ++++I + +FC + R+L++M N +Y +I K
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EAY L DEM+++G PD ++N ++ C + V + +L +++ K V P+ T+N+
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L R G D A + ES+ G P V +Y+ ++ G CK +E C Y MV+ G
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAEC-YLHKMVNSG 316
Query: 286 IPPYSSTVEMLRNRLVGLGFL-DIIEILADKM 316
+ P T + N G + + +IL D M
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+V++Y+ ++ L + G S+A K++ M + D+ H +++ C G A +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M G E +A SY I F + N + + D M + + P++ T+N +I LCK
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V+E+ +L ++++RG P+ +++N + C + ++ A RL+ + E + PD +
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ + + A M G P+ TY+ +++G C K G ++ A K
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC-KAGMMQNADKILRDA 347
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
+ +G P T L N L G ++ + + + ME+
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I+ + L+ CK++++ A + D H TP V TY+ L+ GL +L
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD---------- 113
F MLE+ C +I+ +N L+E+ CK + EA + +EM++ G PD
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 114 ---------------------AFSYS-----IFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
FSYS I I+AFCE ++ ++ M + P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ +TY +I CK ++ A+ L E I +G P + +L C ++ A+ +I
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 208 TRMTKENVMPD 218
M + ++P+
Sbjct: 696 NLMVQNGIVPE 706
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G P+I + L+ + CK + V A + F K TP + T L+ GL GE
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L +A +LF + E K N ++ A C+ N+ A + +M PD ++Y
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I ++C+ +I L LVP+ T ++ LC ++ EA +++ M++
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 179 GANPDEWSYNAILAYHCDRAEV 200
G P+E N+I + D+ EV
Sbjct: 702 GIVPEE--VNSI--FEADKKEV 719
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 137 LDSMKRYNLVPN-------VFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYN 188
L+++K +N V + TY C+I KL + K E +L EM + + E Y
Sbjct: 21 LNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYI 80
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
I+ + + +V A+ + RM + P +YN ++ +LV G F +A +V+ M+
Sbjct: 81 GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140
Query: 249 GFYPSVSTYSVMVHGLC 265
G YP V T+++ + C
Sbjct: 141 GIYPDVYTHTIRMKSFC 157
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 10/297 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVG 58
M E GI S+ L+ L+ ALCK K V A + F + P TY L+ GL +G
Sbjct: 146 MRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLG 205
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+SEA++LF EM ++ ++ + SL+ +C++ N+DEA G+L EM+ EP+ F+YS
Sbjct: 206 NISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYS 265
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ ++L+ M + + +PN+ TY+ +I LCK K+ EA ++LD M +
Sbjct: 266 SLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQ 325
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY-------NMVLKLLVR 231
G P+ Y I++ C A I M + P+R ++ NMV++ L
Sbjct: 326 GLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCN 385
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
RA +++ SM R + T+ +V C K+G L +A + E MV +G P
Sbjct: 386 NVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFC-KRGDLHKAARILEEMVLDGCIP 441
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 128/251 (50%), Gaps = 2/251 (0%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG-NIDE 97
+ PT K Y ++ L + + A + EM E P +++ N L++A+CK +D
Sbjct: 115 QLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDS 174
Query: 98 AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
A + +EM + G +PD+++Y I+ C +I + M++ +V TY +I
Sbjct: 175 ALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIH 234
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
LC++ ++EA LL+EM P+ ++Y++++ C + A++L+ M K++ +P
Sbjct: 235 GLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLP 294
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+ TY+ ++ L + + A E+ + M +G P+ Y ++ GLC G +EA +
Sbjct: 295 NMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLC-AAGSYQEAANF 353
Query: 278 FEMMVDEGIPP 288
+ MV GI P
Sbjct: 354 IDEMVLGGISP 364
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
+ RG G V +A ++F +M + A+ ++L+ + + ++ A G REMR +G
Sbjct: 91 ICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELG 150
Query: 110 AEPDAFSYSIFIHAFCEAND-IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
S +I I A C+ + + S R+ M P+ +TY +I LC+ + EA
Sbjct: 151 IPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEA 210
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L EM ++G + +Y +++ C ++ A+ L+ M + ++ P+ TY+ ++
Sbjct: 211 KELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDG 270
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G +A ++ E M+K+ P++ TYS +++GLCK++ KL EA + + M +G+ P
Sbjct: 271 LCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKER-KLREAVEILDRMRIQGLKP 329
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
I+P+++ L+ LCK H A Q + + KH P + TYS L+ GL +L EA
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHL-PNMVTYSTLINGLCKERKLREA 315
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI---- 119
++ D M + + + ++ +C AG+ EA + EM G P+ S+S+
Sbjct: 316 VEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRM 375
Query: 120 ---FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C D F++ SM+ + + T++C+++ CK + +A ++L+EM+
Sbjct: 376 HNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMV 435
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMA 203
G PDE +N ++ DR +V A
Sbjct: 436 LDGCIPDEGVWNVVIGGLWDRKKVREA 462
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 154/312 (49%), Gaps = 3/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ + A + A P TY+ L+RGL D G + +A
Sbjct: 100 GAPVDVFAYNTLVAGYCRYGRLDAARRLI--ASMPVPPDAYTYTPLIRGLCDRGRVGDAL 157
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML R+C ++ + LLEA+CK+ +A +L EMR+ G P+ +Y++ I+
Sbjct: 158 SLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGM 217
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++L+ + Y P+ +Y +++ LC ++ E+ L EM+E P+E
Sbjct: 218 CREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNE 277
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A+ ++ RM++ + N+V+ + + GR D A E +
Sbjct: 278 VTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNN 337
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P +Y+ ++ GLC + G+ E+A + MV + PP T L G
Sbjct: 338 MGSYGCSPDTISYTTVLKGLC-RAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKG 396
Query: 305 FLDIIEILADKM 316
+D +L ++M
Sbjct: 397 LIDQAILLIEQM 408
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+ +G +P +L LC K + V F + ++ P T+ +LVR G
Sbjct: 233 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGM 292
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ D M E C + N ++ ++CK G +D+A L M S G PD SY+
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A +L+ M R N PN T+N I LC+ +++A L+++M E G
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG 412
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YNA++ C + V+ AL L + E P+ TY +L L R D A
Sbjct: 413 CSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAA 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M + +V T++V+V C+K G +EEA + + M++ G P
Sbjct: 470 ELLAEMMQNDCPLNVVTFNVLVSFFCQK-GFVEEAIELVQQMMEHGCTP 517
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 148/313 (47%), Gaps = 6/313 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+PS+ LL A+CK A + D + + TP + TY++++ G+ + +AR+
Sbjct: 169 QPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQ 228
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ + + D +++ ++L+ +C A ++ + EM P+ ++ + + FC
Sbjct: 229 ILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFC 288
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ VLD M + N N +I +CK +V++A++ L+ M G +PD
Sbjct: 289 RGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTI 348
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY +L C A L+ M ++N P+ T+N + +L + G D+A + E M
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM 408
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ G + TY+ +V+G C +G+++ A + F + E P + T L L
Sbjct: 409 PEYGCSVGIVTYNALVNGFC-VQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAER 464
Query: 306 LD-IIEILADKME 317
LD E+LA+ M+
Sbjct: 465 LDAAAELLAEMMQ 477
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 7/305 (2%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L H+L K +H++ +H + E S L R + +L+EA +L +
Sbjct: 5 LPSFPHSLSKPRHLRHSHIAAAATRPEAAAPSPASSRLRRLIAR-DDLAEAARLVERSTS 63
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
R D+ L+ +C+ G +A +LR GA D F+Y+ + +C + +
Sbjct: 64 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDA 123
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
R++ SM + P+ +TY +IR LC +V +A LLD+M+ R P +Y +L
Sbjct: 124 ARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLE 180
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + A++++ M + P+ TYN+++ + R R D A ++ + GF P
Sbjct: 181 AVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQP 240
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEI 311
+Y+ ++ GLC K + E+ F MV+ P T +ML G ++ IE+
Sbjct: 241 DTVSYTTVLKGLCAAK-RWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEV 299
Query: 312 LADKM 316
L D+M
Sbjct: 300 L-DRM 303
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E+G I + L++ C + V A + F++ E P TY+ L+ GL L
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE--PNTITYTTLLTGLCHAERL 465
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +L EM++ CP++++ N L+ C+ G ++EA ++++M G P+ +++
Sbjct: 466 DAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTL 525
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ E + +L + + + TY+ I+ L + +++EEA Q+ + + G
Sbjct: 526 LDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGM 585
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P YN IL+ C R E + A+ M + MP+ TY ++++ L R G A
Sbjct: 586 RPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARY 645
Query: 241 VWESMEKRG 249
V + RG
Sbjct: 646 VLSELCSRG 654
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 152/354 (42%), Gaps = 69/354 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G + + +++++CK+ V A +F +N + +P +Y+ +++GL G
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-------------- 105
+A++L +EM+ + CP + + N+ + +C+ G ID+A ++ +M
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422
Query: 106 ------------------RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
S+ EP+ +Y+ + C A + + +L M + +
Sbjct: 423 LVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPL 482
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
NV T+N ++ C+ VEEA +L+ +M+E G P+ ++N +L + AL L+
Sbjct: 483 NVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELL 542
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV------------- 254
+ + + D TY+ ++ +L R R + A +++ +++ G P
Sbjct: 543 HGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKR 602
Query: 255 ----------------------STYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
STY +++ GL ++G L+EA + G+
Sbjct: 603 CETDRAIDFFAHMVSNSCMPNESTYVILIEGL-AREGLLKEARYVLSELCSRGV 655
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 163/332 (49%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P I ++L+H LCK+ +V+ + + F K P + T++I ++GL G
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L + ++ D++++N+L+ CK + EA L +M + G EP+ F+Y+
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC------------------- 160
I+ FC+A + + ++L +P+ FTY+ +I LC
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 161 ----------------KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
K V +A QL+ +M+E G +PD W+YN ++ C ++ A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ + +PD T+N ++ + D+A E+ ++M G P V TY+ +++GL
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
CK + KL+ F+ M+++G P T +L
Sbjct: 507 CKAR-KLDNVVDTFKAMLEKGCTPNIITYNIL 537
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 160/324 (49%), Gaps = 9/324 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH---EFTPTVKTYSILVRGLGDV 57
M + GI P +Y + + C A + +N EF +Y ++ G
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV--SYCAVISGFYKE 194
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
EA LFDEML++ DIL N L+ +CK GN+ E+ + ++ G P+ F++
Sbjct: 195 NCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF 254
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+IFI C I R+L+S+ L P+V +YN +I CK+ K+ EA L +M+
Sbjct: 255 NIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+E++YN I+ C + A +++ + +PD TY+ ++ L G +R
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 238 ATEV-WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A V +E+MEK GF S+ Y+ +V GL K+G + +A + + M++ G P T ++
Sbjct: 375 AMAVFYEAMEK-GFKHSIILYNTLVKGL-SKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432
Query: 297 RNRLVGLGFL-DIIEILADKMERS 319
N L +G L D IL D + +
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKG 456
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 154/325 (47%), Gaps = 40/325 (12%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
+E G K SI + L+ L K+ V A Q D +H +P + TY+++V GL +G L
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S+A + ++ + + C DI N+L++ CK N+D+A +L M S G PD +Y+
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++ C+A + +V +M PN+ TYN +I CK+ KV EA +L EM RG
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 181 NPD-------------------------------EWSY-----NAILAYHCDRAEVNMAL 204
PD ++SY N ++ C + V+MA
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA-TEVWESMEKRGFYPSVSTYSVMVHG 263
+L +M + PD +TY +++ + G D A T + E++ K G PS +T +++
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK-GLVPSFTTCGKVLNC 681
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LC +L EA +MV GI P
Sbjct: 682 LCVTH-RLSEAVVIINLMVQNGIVP 705
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 152/306 (49%), Gaps = 3/306 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L++ LC + A F++ + F ++ Y+ LV+GL G + +A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M+E C DI +N ++ +CK G + +A+G+L + + G PD F+++ I
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ +LD+M + + P+V TYN ++ LCK K++ M+E+G P+
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C +V+ A+ L M + PD T ++ L G D+A E++
Sbjct: 531 IITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV 590
Query: 244 SMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++EK F S + +++M++ C K + A K F M P + T ++ +
Sbjct: 591 TIEKEYKFSYSTAIFNIMINAFCXKL-NVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649
Query: 303 LGFLDI 308
G +D+
Sbjct: 650 TGNIDL 655
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y ++R G G++ EA +F+ M C + ++N+++ + + G +AH + M
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ IG PD ++++I + +FC + R+L++M N +Y +I K
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EAY L DEM+++G PD ++N ++ C + V + +L +++ K V P+ T+N+
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L R G D A + ES+ G P V +Y+ ++ G CK +E C Y MV+ G
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAEC-YLHKMVNSG 316
Query: 286 IPPYSSTVEMLRNRLVGLGFL-DIIEILADKM 316
+ P T + N G + + +IL D M
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+V++Y+ ++ L + G S+A K++ M + D+ H +++ C G A +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRL 168
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M G E +A SY I F + N + + D M + + P++ T+N +I LCK
Sbjct: 169 LNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V+E+ +L ++++RG P+ +++N + C + ++ A RL+ + E + PD +
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ + + A M G P+ TY+ +++G C K G ++ A K
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC-KAGMMQNADKILRDA 347
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
+ +G P T L N L G ++ + + + ME+
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 37/251 (14%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I+ + L+ CK++++ A + D H TP V TY+ L+ GL +L
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD---------- 113
F MLE+ C +I+ +N L+E+ CK + EA + +EM++ G PD
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 114 ---------------------AFSYS-----IFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
FSYS I I+AFC ++ ++ M + P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAP 635
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ +TY +I CK ++ A+ L E I +G P + +L C ++ A+ +I
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 208 TRMTKENVMPD 218
M + ++P+
Sbjct: 696 NLMVQNGIVPE 706
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G P+I + L+ + CK + V A + F K TP + T L+ GL GE
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L +A +LF + E K N ++ A C N+ A + +M PD ++Y
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I ++C+ +I L LVP+ T ++ LC ++ EA +++ M++
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 179 GANPDEWSYNAILAYHCDRAEV 200
G P+E N+I + D+ EV
Sbjct: 702 GIVPEE--VNSI--FEADKKEV 719
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 137 LDSMKRYNLVPN-------VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD----EW 185
L+++K +N V + TY C+I KL + K E +L EM + N D E
Sbjct: 21 LNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEG 77
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
Y I+ + + +V A+ + RM + P +YN ++ +LV G F +A +V+ M
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137
Query: 246 EKRGFYPSVSTYSVMVHGLC 265
+ G YP V T+++ + C
Sbjct: 138 KDIGIYPDVYTHTIRMKSFC 157
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y + L++ALCK +A + F+ K TP TY+IL+ L G+L++A
Sbjct: 401 GLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKA 460
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM CP + +N++++ +CK I+EA + +M G +A +++ I
Sbjct: 461 LDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDG 520
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A I ++D M L PN TYN I+ CK + +A +L M G D
Sbjct: 521 LCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVD 580
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ C AL+L+ M + + P YN V++ L R A ++
Sbjct: 581 VVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFR 640
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + G P TY ++ GLC+ G ++EA + M D G P S+ ML L+ L
Sbjct: 641 EMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNL 700
Query: 304 GFLD----IIEILADK 315
G D IE++ +K
Sbjct: 701 GMDDYLIRAIELIVEK 716
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M GI+P + + ++ ALC+ + + A + + + P T++ L+ G + G
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M E C + N L+ CK G + +A G +++ + G EPD ++S
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F++ C+ + +VL M + P+V+TY+ +I LC N ++EEA ++++M++ G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++N ++ C ++ AL L +T + + P+ +T+N+++ L +VG A
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++E M+ G P TY++++ LC GKL +A + M G P + T
Sbjct: 427 RLFEEMKSSGCTPDEVTYNILIDNLC-SSGKLAKALDLLKEMEVSGCPQSTVT 478
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P+ ++ L++ CK V A + + F P T+S V GL G
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGH 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K+ ML+ C D+ +++++ +C G ++EA G++ +M G PD +++
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C N + + + L PNV+T+N +I LCK A +L +EM G
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +YN ++ C ++ AL L+ M TYN ++ L + R + A
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
EV++ M+ G + T++ ++ GLC + ++++A + + M+ EG+ P + T
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAE-RIDDAAELVDQMISEGLQPNNVT 548
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 37/320 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G +P ++ LC+ HV A + E P V TYS ++ L + GEL EA
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + ++M++ C D N+L+ A+C ++EA + RE+ G P+ ++++I I+A
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPN----------------------------------- 148
C+ D H R+ + MK P+
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TYN II LCK ++EEA ++ D+M G + ++N ++ C+ ++ A L+
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M E + P+ TYN +L + G +A ++ ++M GF V TY+ +++GLCK +
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595
Query: 269 GKLEEACKYFEMMVDEGIPP 288
+ + A K M +G+ P
Sbjct: 596 -RTQAALKLLRGMRMKGMKP 614
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 2/284 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ Y+ L+ L + ++ + EM + D++ N++++A+C+A A ML
Sbjct: 161 TEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLE 220
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
EM S PD +++ + F E I + R+ M P T N +I CK
Sbjct: 221 EMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLG 280
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+V +A + + I G PD +++ + C V+ AL+++ M +E PD +TY+
Sbjct: 281 RVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYS 340
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
V+ L G + A + M G P +T++ ++ LC + +LEEA +
Sbjct: 341 TVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN-QLEEALDLARELTV 399
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQEL 327
+G+ P T +L N L +G + L ++M +S+ CT E+
Sbjct: 400 KGLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEV 442
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 9/293 (3%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNA---KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
++L+ AL ++ + A + ++A TP+ Y ++R LG G + L EM
Sbjct: 57 ERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEM 116
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGML-REMRSIGAEPDAFSYSIFIHAFCEAND 129
V + S + + + D+A ++ ++ G + + Y+ + E +
Sbjct: 117 RREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSK 176
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I + M + P+V T+N +I LC+ + A +L+EM PDE ++
Sbjct: 177 IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ + + ALRL RM++ P T N+++ ++GR A + G
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG 296
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
F P T+S V+GLC + G ++ A K +M+ EG P YS+ + L N
Sbjct: 297 FEPDRVTFSTFVNGLC-QNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M F P + LLH L K + ++ +FF D P+V TY++++ L G+
Sbjct: 186 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +R+LF +M E D++ +NSL++ K G+++E + EM+ +G PD +Y+
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ + F MK L PNV TY+ +I CK ++ A +LL +M G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E++Y +++ +C + A +L+ M + V + TY +L L + GR A
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV+ SM K G P+ Y+ +VHG K + ++E+A K + M + I P
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAE-RMEDAMKILKQMTECNIKP 473
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 5/297 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI PS++ + ++ LCK ++ + + F + +P V TY+ L+ G G VG
Sbjct: 221 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 280
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E LF+EM + C DI+ +N L+ CK + A EM++ G +P+ +YS
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC+ + ++L M+R L+PN FTY +I CK + EA++LL++M++ G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A+L C + A + M K+ + P++ Y ++ ++ R + A
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTV 293
++ + M + P + Y ++ G C ++ KLEE E M GI P S+T+
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQR-KLEETKLILEEMKSRGISANPVISTTI 516
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++ L+ A CK ++ A + D + P TY+ L+ G L+EA
Sbjct: 330 GLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 389
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ML+ ++I+ + +LL+ +CKAG + EA + R M G P+ Y+ +H
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ +A + ++L M N+ P++ Y II C K+EE +L+EM RG + +
Sbjct: 450 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
I+ + + + AL M V TY +++ L G + A + +
Sbjct: 510 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFC 569
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M G P+V+ Y+ ++ GLC +E A K F+ M G+ P
Sbjct: 570 RMLSLGLQPNVAVYTSLIDGLCXNNC-IESAKKLFDEMQCRGMTP 613
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G P I + L++ CK + + A ++F K+ P V TYS L+ G
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A KL +M + + SL++A CKAGN+ EA +L +M G + + +Y+
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + V SM + + PN Y ++ K E++E+A ++L +M E
Sbjct: 411 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y +I+ HC + ++ ++ M + + ++ + G+ A
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 530
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++ M+ G ++ TY V++ GLC + G +E A YF M+ G+ P Y+S ++
Sbjct: 531 NFFQEMQDVGVEATIVTYCVLIDGLC-EAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589
Query: 296 L 296
L
Sbjct: 590 L 590
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 43/313 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G+K +I LL LCK + A + F + K +P + Y+ LV G
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMC----------------------------- 90
+ +A K+ +M E D++ + S++ C
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515
Query: 91 ------KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
KAG +A +EM+ +G E +Y + I CEA + M
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L PNV Y +I LC N +E A +L DEM RG PD ++ A++ + + AL
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LI+RMT+ + D H Y ++ + G +A + + M ++G P V+ L
Sbjct: 636 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE----EVLCICL 691
Query: 265 CK---KKGKLEEA 274
+ K+G+L+EA
Sbjct: 692 LREYYKRGQLDEA 704
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ +L ++G L EA + F M + + N LL + K+GN +M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G P F+Y++ I C+ D+ + R+ M+ L P+V TYN +I K +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EE L +EM + G PD +YN ++ +C ++ A + M + P+ TY+ +
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + G A ++ M + G P+ TY+ ++ C K G L EA K M+ G
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC-KAGNLTEAWKLLNDMLQAG 400
Query: 286 I 286
+
Sbjct: 401 V 401
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%), Gaps = 5/253 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH---EFTPTVKTYSILVRGLGDV 57
M E IKP + ++ C ++ ++ + K P + T ++
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST--TIIDAYFKA 523
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+ S+A F EM + I+ + L++ +C+AG ++ A M S+G +P+ Y
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVY 583
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I C N I S ++ D M+ + P++ + +I K+ ++EA L+ M E
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
D Y ++++ E++ A + M ++ ++P+ +L+ + G+ D
Sbjct: 644 LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703
Query: 238 ATEVWESMEKRGF 250
A E+ ME+ +
Sbjct: 704 AIELKNEMERMAY 716
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 168/361 (46%), Gaps = 38/361 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M E+GI+P++ + +LH+ CK V+ A + P+ T+++L+ GL GE
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 60 LSEAR-----------------------------------KLFDEMLERKCPVDILAHNS 84
L +A+ L++EM+ R + +HN+
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ CK G + +A L +M PD SY+ I+ FC +I F +LD ++ N
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L N+ TYN +I LC+ +E A +L ++MI RG +PD +Y ++ C + MA
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + PD+ Y + +++G +A ++ E M +GF P V TY+V V+GL
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527
Query: 265 CKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
C K G LEEA + + M+ +G +P + + + + + EI D + R + T
Sbjct: 528 C-KLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPT 586
Query: 324 I 324
+
Sbjct: 587 V 587
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 6/328 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M++ + P I + L++ C+ ++ A D + + + TY+ L+ GL +G+
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGD 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A KL ++M+ R D++ + L+ CK GN+ A EM +G PD F+Y+
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + D F++ + M P+V TYN + LCK +EEA +LL +MI G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y + + H + + + M P TY +++ GR D A
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAM 607
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M+++G P+V TY+V+++G CK + K+++ACK+F M ++GI P T +L N
Sbjct: 608 AYFLEMQEKGVVPNVITYNVLINGFCKVR-KMDQACKFFIEMQEKGIFPNKYTYTILINE 666
Query: 300 LVGLG----FLDIIEILADKMERSTSCT 323
+G L + + K R SCT
Sbjct: 667 NCNMGKWQEALRLYAQMLGKRIRPDSCT 694
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P++ + +++ CK + A Q D K P + +Y+ L+ G +G
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L DE+ R +I+ +N+L++ +C+ G+++ A + +M + G PD +Y++
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ ++ D M L P+ F Y I K +A++L +EM+ +G
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN + C + A L+ +M ++ +PD TY + + G
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E++ M RG P+V TY+V++H G+L+ A YF M ++G+ P T +L N
Sbjct: 573 EIFYDMLSRGQTPTVVTYTVLIHAHA-LNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHAL-CKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + +++L L K VK + ++ PTV TY+ ++ GE+ A L
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M ER C + N L+ + K G + +A G+++EM G ++Y+ I +C+
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + + M + P V ++N I+ CK K+ +A Q L +M+++ PD S
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ C + A L+ + N+ + TYN ++ L R+G + A ++ E M
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
RG +P V TY+V+V+G C K G + A ++F+ M+ G+ P
Sbjct: 440 NRGIHPDVVTYTVLVNGAC-KLGNMLMAKEFFDEMLHVGLAP 480
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 140/286 (48%), Gaps = 3/286 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P + L++ CK ++ +A +FFD H P Y+ + G +G+
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A KL +EML + P D++ +N + +CK GN++EA +L++M G PD +Y+
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+HA E + + M P V TY +I N +++ A EM E+G
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C +++ A + M ++ + P+++TY +++ +G++ A
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ M + P T+ ++ L K +A ++ E ++ +G
Sbjct: 678 RLYAQMLGKRIRPDSCTHGALLKKL--DKDYKVQAVQFIESLILDG 721
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
++ F P VK + +++ L D L +A +++ M E + +N++L + CK G +
Sbjct: 195 RNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQ 254
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A ++ +M+ G P ++++ I+ + ++ ++ M + L + +TYN +I
Sbjct: 255 RALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLI 314
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK + EA L +EM+ RG +P S+N I+ C +++ A + ++ M K+N+M
Sbjct: 315 CGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLM 374
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD +YN ++ R+G A + + + R ++ TY+ ++ GLC + G LE A K
Sbjct: 375 PDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC-RLGDLETALK 433
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
E M++ GI P T +L N LG + + + D+M
Sbjct: 434 LKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM 473
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V + M R +P+V N I++ L + +A ++ M E G P +YN +L C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
EV AL L+ +M + P T+N+++ L + G +A + + M K G S
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY+ ++ G C KKG L EA +E MV G+ P
Sbjct: 309 TYNPLICGYC-KKGLLVEALALWEEMVTRGVSP 340
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIE-RGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ + I++ L N ++ AY +++ +I + L Y C L +
Sbjct: 140 YAFCAILQILVDNCLMKSAYWVMERIISFEMYGIVDVLIGGYLNYQC--------LLVFE 191
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M + +PD N +LK+L +A EV+ M + G P+V+TY+ M+H C K
Sbjct: 192 KMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC-KG 250
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
G+++ A M + G P T +L N L G L + L +M ++
Sbjct: 251 GEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKA 301
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P++ + L+ A CK+K VK A A + +Y+ ++ GL G +SE
Sbjct: 237 GISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEV 296
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM + D + +N+L+ CK GN+ + +L EM G P+ +Y+ I+
Sbjct: 297 GELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINC 356
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A ++ + D M+ L PN TY +I C+ + EAY++L EMI G +P
Sbjct: 357 MCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ +C V A+ ++ M + + PD +Y+ V+ R +A ++ E
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKE 476
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M ++G P TYS ++ GLC ++ KL EA F M+ G+PP T L N
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQ-KLVEAFDLFREMMRRGLPPDEVTYTSLIN 530
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 16/314 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--------TPTVKTYSILVRGLGD 56
G P++ + +L AL +R H+ +D+A+ F +P V TY++++RG+
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSN--HRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+L + +M + +++ +N+L++A CK + EA +LR M G + S
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I+ C + V +++ M+ LVP+ TYN ++ CK + + LL EM+
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P+ +Y ++ C ++ A+ + +M + P+ TY ++ + G +
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMN 399
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A +V M GF PSV TY+ +VHG C G+++EA MV+ G+PP YS+
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYC-FLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 293 VE-MLRNRLVGLGF 305
+ R R +G F
Sbjct: 459 IAGFCRERELGKAF 472
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 23/315 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G+ P++ L++ +CK ++ A + FD + P +TY+ L+ G G
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA K+ EM+ ++ +N+L+ C G + EA G+LR M G PD SYS
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ F++ + M ++P+ TY+ +I+ LC +K+ EA+ L EM+ RG
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +Y +++ +C E++ ALRL M + +PD TY++++ L + R T
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR----T 573
Query: 240 EVWESMEKRGFY----PSVSTYSVM-----------VHGLCKK---KGKLEEACKYFEMM 281
+V + + + FY P TY+ + V GL K KG + EA + F+ M
Sbjct: 574 KVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTM 633
Query: 282 VDEGIPPYSSTVEML 296
+ P ++ ++
Sbjct: 634 LQRNHKPNAAIYNLM 648
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 10/301 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ----FFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G+ P + L++ CK ++ HQ + +P V TY+ L+ + G L
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGNL---HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S A ++FD+M R + + +L++ C+ G ++EA+ +L EM G P +Y+
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H +C + +L M L P+V +Y+ +I C+ ++ +A+Q+ +EM+E+G
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGV 483
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +Y++++ C + ++ A L M + + PD TY ++ G +A
Sbjct: 484 LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP---PYSSTVEMLR 297
+ + M +RGF P TYSV+++GL KK ++ +E +P Y++ +E
Sbjct: 544 LHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCS 603
Query: 298 N 298
N
Sbjct: 604 N 604
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK--AGNIDE 97
FTP +Y +L S+ R L + + + AHN CK A +I
Sbjct: 37 FTPQAASYVLL-------NSQSDQRTLLNFLTWAQAQAQ--AHNFFFTPHCKCLALHILV 87
Query: 98 AHGMLREMRSIGAE-----PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
+ R S+ A+ PD S+F H +H F + S + V +
Sbjct: 88 RFKLYRTAHSLAADLAATLPDPTGASLFRH-------LHDTFHLCSSPFSSSAV-----F 135
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM-----ALRLI 207
+ +++ L + V +A LL G P SYNA+L R+ N A R+
Sbjct: 136 DLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVF 195
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + V P+ +TYN++++ +V G ++ MEK G P+V TY+ ++ CKK
Sbjct: 196 RDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKK 255
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K K++EA M G+ + + N L G G + + L ++M
Sbjct: 256 K-KVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM 303
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 111/304 (36%), Gaps = 86/304 (28%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P + ++ C+ + + A Q + + P TYS L++GL +
Sbjct: 443 MVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQK 502
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF EM+ R P D + + SL+ A C G + +A + EM G PD +YS+
Sbjct: 503 LVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSV 562
Query: 120 FIHAF----------------------------------CEANDIHSV------------ 133
I+ C N+ SV
Sbjct: 563 LINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGL 622
Query: 134 ----FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM-------------- 175
RV +M + N PN YN +I + V +AY L E+
Sbjct: 623 MNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIA 682
Query: 176 ----IERGANPDEWS---YNAILAYHCDRAEV------------NM--ALRLITRMTKEN 214
+ R DE S N + + + A+V NM L ++T M K+
Sbjct: 683 LVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDG 742
Query: 215 VMPD 218
++PD
Sbjct: 743 LLPD 746
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
M E G+ PS+ + LL + KR +A Q FD + TP T++IL+RG
Sbjct: 262 MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 321
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS 116
+ E F EM KC D++ +N+L++ +C+AG + AH +++ M +S P+ +
Sbjct: 322 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 381
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I +C D+ +L M L PN TYN +I+ LC+ +K+++ ++L+ M+
Sbjct: 382 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 441
Query: 177 ERGAN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G PD + N ++ HC ++ A + +M++ V PD TY+++++ L + G F
Sbjct: 442 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 501
Query: 236 DRATEVWESMEKR-------GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI-- 286
RA E ++ + ++ G P V+ Y+ M LC GK ++A + F ++ G
Sbjct: 502 RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC-SNGKTKKAERVFRQLMKRGTQD 560
Query: 287 PPYSSTV 293
PP T+
Sbjct: 561 PPSYKTL 567
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 21/319 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR- 64
+ PS+ L R K H F FT ++Y +++ LG L+ AR
Sbjct: 182 LAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARN 241
Query: 65 ---------------KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSI 108
K+F M E ++ NSLL + K G A + EM +
Sbjct: 242 FVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY 301
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD ++++I I FC + + F M R+ P+V TYN ++ LC+ KV+ A
Sbjct: 302 GVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 361
Query: 169 YQLLDEMIERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+ ++ M+++ N P+ +Y ++ +C + ++ AL L+ M + P++ TYN ++
Sbjct: 362 HNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 421
Query: 227 KLLVRVGRFDRATEVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + D+ E+ E M GF P T + ++ C GKLEEA FE M +
Sbjct: 422 QGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHC-TMGKLEEAFSVFEKMSELR 480
Query: 286 IPPYSSTVEMLRNRLVGLG 304
+ P S+T +L L G
Sbjct: 481 VQPDSATYSVLVRSLCQRG 499
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 47/319 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDV 57
M F P + + L+ LC+ VK+AH +P V TY+ L+RG
Sbjct: 333 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMK 392
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA------------------------- 92
+++EA L EM+ R + + +N+L++ +C+A
Sbjct: 393 QDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCT 452
Query: 93 -----------GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
G ++EA + +M + +PD+ +YS+ + + C+ D D +
Sbjct: 453 LNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELA 512
Query: 142 RYNLV-------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ P V YN + LC N K ++A ++ ++++RG D SY ++ H
Sbjct: 513 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 571
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C L+ M + + +PD TY +++ L++ G A + E M K P+
Sbjct: 572 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 631
Query: 255 STYSVMVHGLCKKKGKLEE 273
+ + ++ L +K+ ++ +
Sbjct: 632 AIFHSILAALVEKERRIRQ 650
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILA 192
+V +MK + P+V T+N ++ + K + A QL DEM++ G PD +++N ++
Sbjct: 256 IKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIR 315
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG--F 250
C + V+ M++ PD TYN ++ L R G+ A V + M K+
Sbjct: 316 GFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNL 375
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
P+V TY+ ++ G C K+ + EA MV G+ P T L L LD I+
Sbjct: 376 SPNVVTYTTLIRGYCMKQ-DMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 434
Query: 311 -----ILADKMERSTSCTIQELANA 330
++ D +CT+ L A
Sbjct: 435 EILEGMVGDGGFIPDTCTLNTLIKA 459
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 34/341 (9%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ A C ++ A F+ ++ P TYS+LVR L G+ A
Sbjct: 445 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 504
Query: 64 RKLFDEMLERK-------CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ FDE+ E++ C + A+N + E +C G +A + R++ G + D S
Sbjct: 505 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPS 563
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y I C + F +L M R + VP+ TY +I L K A++ L++M+
Sbjct: 564 YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 623
Query: 177 ERGANPDEWSYNAILAYHCD---RAEVNMALRLIT-RMTKENVMPDRHTYNMVLKLLVRV 232
+ P +++ILA + R N+ L T R+ ++ + D+ M + LL
Sbjct: 624 KSSHLPTTAIFHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQDKAF--MTIGLLYEN 681
Query: 233 GRFDRATEVWE-----------------SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
G + E+ S+EKR + S ++ GLCK K+ EA
Sbjct: 682 GYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSV-DIDMCSTVISGLCKAH-KVSEAF 739
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ +V++G+ + E LR L G L+ + ++ KM
Sbjct: 740 ALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKM 780
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 37/356 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E P+ + ++ LCK V+ A + P V TY+ L++GL
Sbjct: 362 MIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L+ EM + C D +N L++++C G + EA +L+EM G + +Y+
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNT 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ I + D M+ + N TYN +I LCK+E+VEEA QL+D+MI G
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++YN++L Y C ++ A ++ M + PD TY ++ L + GR + AT
Sbjct: 542 LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAAT 601
Query: 240 EVWESMEKRGF-----------------------------------YPSVSTYSVMVHGL 264
++ +++ +G P TY ++ GL
Sbjct: 602 KLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGL 661
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
C+ G + EA + M++ G P S+ ML L L + +I+++ ME++
Sbjct: 662 CQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKA 717
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 7/319 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
MVE G + ++ L++ CK ++ A +F + + + F P T+++LV GL G
Sbjct: 256 MVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTG 315
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A ++ D ML DI +NSL+ +CK G +DEA +L +M P+ +Y+
Sbjct: 316 HVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYN 375
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ N + ++ + ++P+V TYN +I+ LC + A +L EM +
Sbjct: 376 TIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK 435
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PDE++YN ++ C R ++ AL L+ M + TYN ++ + R A
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+++ ME +G + TY+ ++ GLCK + ++EEA + + M+ EG+ P T L
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSE-RVEEASQLMDQMIMEGLRPDKFTYNSLLT 554
Query: 299 RLVGLGFL----DIIEILA 313
G + DI++ +A
Sbjct: 555 YFCKAGDIKKAADIVQTMA 573
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 156/287 (54%), Gaps = 3/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV GI+P + + L+ ALC+ ++ A + + P KT++ +++G + G
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYS 118
L A ++ ++M+E C V + N L+ CK G I+EA + EM G PD ++++
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ ++ + + V+D M R P+++TYN +I LCK +V+EA ++L++MIER
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P+ +YN I++ C +V A +L +T + ++PD TYN +++ L A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E+++ M+ +G +P TY++++ LC +GKL+EA + M G
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLC-FRGKLQEALNLLKEMEVSG 471
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 11/283 (3%)
Query: 31 QFFDNAKHEFTPTVKT--YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEA 88
QF D + EF T Y+ L+ L D +L M+ R D+ N L++A
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA 204
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+C+A I A ++ EM G PD +++ + F E ++ RV + M V
Sbjct: 205 LCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVT 264
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEM-IERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
T N ++ CK ++EEA + ++EM + G PD++++N ++ V AL ++
Sbjct: 265 NVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM 324
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M +E PD +TYN ++ L ++G D A +V M +R P+ TY+ ++ LCK+
Sbjct: 325 DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKE 384
Query: 268 KGKLEEACKYFEMMVDEGIPP----YSSTVEML---RNRLVGL 303
++EEA K ++ +GI P Y+S ++ L RN V +
Sbjct: 385 N-QVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 52/331 (15%)
Query: 15 QLLHALCKRKHVK-VAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
QLLH+L + + V H F+ +K F P+ + ++ LG GE + + EM
Sbjct: 58 QLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM-- 115
Query: 73 RKCPVDILAHNSLL---EAMCKAGNIDE-------------------------------- 97
K + ++ ++SLL E+ G +E
Sbjct: 116 -KISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGN 174
Query: 98 -------AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
AH M S G PD +++I I A C A+ I +++ M+ + L+P+
Sbjct: 175 KLKLVEIAHS---NMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEK 231
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T+ I++ + ++ A ++ ++M+E G + N ++ C + ALR I M
Sbjct: 232 TFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM 291
Query: 211 T-KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ +E PD++T+NM++ L + G A EV + M + GF P + TY+ ++ GLC K G
Sbjct: 292 SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC-KLG 350
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++EA K M++ P + T + + L
Sbjct: 351 EVDEAVKVLNQMIERDCSPNTVTYNTIISTL 381
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 154/303 (50%), Gaps = 2/303 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK K V A+ + PTV T+S L+ G VG+ +A +LF+EM+ +
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D N L++A+CK G I EA ++ M G EP +Y+ + +C N++
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL + R + PN +YN +I CK + V+EA L EM RG P + +YN+++
Sbjct: 319 HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGL 378
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A L+ M + D TYN ++ + + D+A + + +++ G P++
Sbjct: 379 CKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNM 438
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
TY++++ GLC K G+L+ A F+ ++ +G + T ++ N L G D E+L
Sbjct: 439 CTYNILIDGLC-KGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLS 497
Query: 315 KME 317
KME
Sbjct: 498 KME 500
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV I P Y + L+ ALCK +K A K PTV TY+ L+ G V E
Sbjct: 254 MVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNE 313
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+ + + + + ++N ++ CK +DEA + EM G P +Y+
Sbjct: 314 VGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNS 373
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A I + ++D M + ++ TYN +I CKN+ V++A L+ ++ E G
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C ++ A + + + + TYN+++ L + G FD A
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAE 493
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV-EMLRN 298
+ ME G P TY ++ L K E+A K MV +G+ Y+ + L
Sbjct: 494 VLLSKMEDNGIIPDAVTYETIIQALFHKDEN-EKAQKLLREMVIKGVVVYAFEIRRTLVG 552
Query: 299 RLVGLGFLDIIEILADKME 317
R + LG +++I +L +E
Sbjct: 553 RTLNLG-MNLISLLFSALE 570
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 153/318 (48%), Gaps = 27/318 (8%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAK-------HE------FTP 42
G+KP ++ L L++ C + A F N K H+ F
Sbjct: 97 GVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHL 156
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
TY IL+ GL +G+ A ++ ++ + +++ ++++++ +CK + +A+G+
Sbjct: 157 NHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLY 216
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
EM P ++S I+ FC FR+ + M N+ P+ +T+N ++ LCK
Sbjct: 217 SEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
K++EA ++ M++ G P +YN ++ +C EV A +++ +++ V P+ +Y
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSY 336
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N+++ ++ D A ++ M RG P TY+ ++ GLC K G++ A + + M
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLC-KAGRIPYAWELVDEMH 395
Query: 283 DEGIPP----YSSTVEML 296
+ IP Y+S +++
Sbjct: 396 NNCIPADIVTYNSLIDVF 413
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 23/252 (9%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGN-IDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F+ M + + I+ N +L + K N + +M S G +PD F+ SI I+ +C
Sbjct: 54 FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113
Query: 126 EANDIHSVFRVLDSMKRYNLVPN-------VF--------------TYNCIIRKLCKNEK 164
+ F V + + L N +F TY +I LCK +
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
A Q+L ++ + N + Y+ I+ C V A L + M + + P T++
Sbjct: 174 TRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSS 233
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ VG+F A ++ M + P T++++V LC K+GK++EA +M+ E
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALC-KEGKIKEAKNVIAVMMKE 292
Query: 285 GIPPYSSTVEML 296
G+ P T L
Sbjct: 293 GVEPTVVTYNTL 304
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 2/271 (0%)
Query: 19 ALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV 77
A CKR K A + D + + TP + TY+++V G+ G + +A + + C
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+ +++N +L+ +C A ++A ++ EM G P+ ++++ I C + VL
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ + +Y PN +YN ++ CK +K+++A LD M+ RG PD SYN +L C
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
EV++A+ L+ ++ + P +YN V+ L + G+ A E+ M +G P + TY
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
S + GLC++ ++E+A + F + D GI P
Sbjct: 241 STIAAGLCRED-RIEDAIRAFGKVQDMGIRP 270
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 155/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +++ +C+ V A +F N + P +Y+I+++GL
Sbjct: 18 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 77
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ CP +++ N L+ +C+ G ++ A +L ++ G P++ SY+
Sbjct: 78 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 137
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ + LD M P++ +YN ++ LC++ +V+ A +LL ++ ++G
Sbjct: 138 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 197
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SYN ++ + AL L+ M + + PD TY+ + L R R + A
Sbjct: 198 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 257
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++ G P+ Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 258 RAFGKVQDMGIRPNTVLYNAIILGLCKRR-ETHSAIDLFAYMIGNGCMPNESTYTILIEG 316
Query: 300 LVGLGFLDIIEILADKM 316
L G + L D++
Sbjct: 317 LAYEGLIKEARDLLDEL 333
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P++ + L+ LC++ V+ A + + K+ TP +Y+ L+ +
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A D M+ R C DI+++N+LL A+C++G +D A +L +++ G P SY+
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 207
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M L P++ TY+ I LC+ +++E+A + ++ + G
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YNAI+ C R E + A+ L M MP+ TY ++++ L G A
Sbjct: 268 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 327
Query: 240 EVWESMEKRG 249
++ + + RG
Sbjct: 328 DLLDELCSRG 337
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 2/291 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +P+++ + ++ +CK V+ A F+ K P TY+ ++ G G VG
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + F+EM + C D++ +N+L+ CK G + REM+ G +P+ SYS
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ + + M+R LVPN +TY +I CK + +A++L +EM++ G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A++ CD + A L +M V+P+ +YN ++ V+ DRA
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
E+ ++ RG P + Y + GLC + K+E A M + GI S
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLE-KIEAAKVVMNEMKECGIKANS 410
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 17/328 (5%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L ++ A Q F K P ++ + L+ +G+ + ++
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N +++ MCK G+++ A G+ EM+ G PD +Y+ I F +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK P+V TYN +I CK K+ + EM G P+ S
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + A++ M + ++P+ +TY ++ ++G A + M
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G +V TY+ ++ GLC + +++EA + F M G+ P ++ L + GF
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAE-RMKEAEELFGKMDTAGVIPNLASYNALIH-----GF- 350
Query: 307 DIIEILADKMERSTSCTIQELANAMRGK 334
+ A M+R+ EL N ++G+
Sbjct: 351 ----VKAKNMDRAL-----ELLNELKGR 369
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + +P + + L++ CK + + +F+ K + P V +YS LV G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A K + +M + + SL++A CK GN+ +A + EM +G E + +Y+
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + + M ++PN+ +YN +I K + ++ A +LL+E+ RG
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y + C ++ A ++ M + + + Y ++ + G
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ + M++ +V T+ V++ GLCK K + +A YF + ++
Sbjct: 431 HLLDEMKELDIEVTVVTFCVLIDGLCKNK-LVSKAVDYFNRISND 474
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + L+H K K++ A + + K P + Y + GL + ++ A
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 394
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + +EM E + L + +L++A K+GN E +L EM+ + E ++ + I
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 454
Query: 124 FCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + + + L N + +I LCK+ +VE A L ++M+++G P
Sbjct: 455 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 514
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y +++ + + V AL L +M + + D Y ++ L + +A
Sbjct: 515 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 574
Query: 243 ESMEKRGFYP 252
E M G +P
Sbjct: 575 EEMIGEGIHP 584
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M E I+ ++ L+ LCK K V A +F+ ++F ++ ++ GL
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 495
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A LF++M+++ D A+ SL++ K GN+ EA + +M IG + D +Y+
Sbjct: 496 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 555
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ N ++++A L+EMI
Sbjct: 556 SLVWGLSHCN-----------------------------------QLQKARSFLEEMIGE 580
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
G +PDE ++L H + ++ A+ L + + K ++
Sbjct: 581 GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 618
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
VF VL S + VP ++ + L +EEA Q +M P S N +L
Sbjct: 45 VFDVLWSTRNV-CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 103
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ + R M P TYN+++ + + G + A ++E M+ RG P
Sbjct: 104 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 163
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
TY+ M+ G K G+L++ +FE M D P T L N G L I
Sbjct: 164 DTVTYNSMIDGF-GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 165/356 (46%), Gaps = 29/356 (8%)
Query: 6 IKPS--IYDLDQ---LLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
IKP+ I+ L++ +++ C A Q + + +P V TY+ L+ G
Sbjct: 246 IKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG 305
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA +L+DEML R + ++S+++ CK +D A M M + G PD +++
Sbjct: 306 KFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFN 365
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I +C A + ++L M LV N TY +I C+ + A LL EM+
Sbjct: 366 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-----------NVMPDRHTYNMVLK 227
G P+ + N +L CD ++ AL + M K V PD TYN+++
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILIS 485
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L+ G+F A E++E M RG P TY+ ++HGLCK+ +L+EA + F+ M +
Sbjct: 486 GLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS-RLDEATQMFDSMGSKSFS 544
Query: 288 PYSSTVEMLRNRLVGLGFL-DIIEILADKMERSTSCTIQELANAMRGKT---GFRK 339
P T L N G + D +E+ + R +ANA+ T GFRK
Sbjct: 545 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI------VANAITYITLIHGFRK 594
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 15/328 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+ + G P++ LLH LC + A F H+ P V T++ L+ GL G
Sbjct: 139 ITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF----HQMCKPNVVTFTTLMNGLCREGR 194
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYS 118
+ EA L D MLE + + + ++++ MCK G+ A +LR+M + +P+ +
Sbjct: 195 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWP 254
Query: 119 I-----FIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ I+ FC + ++L M +R + P+V TYN +I K K EA +L
Sbjct: 255 LERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELY 314
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
DEM+ RG P +Y++++ C + ++ A + M + PD T+N ++ R
Sbjct: 315 DEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRA 374
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
R D ++ M + G + TY+ ++HG C + G L A + MV G+ P T
Sbjct: 375 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC-QVGDLNAAQDLLQEMVSSGVCPNVVT 433
Query: 293 VEMLRNRLVGLGFL-DIIEILADKMERS 319
L + L G L D +E+ M++S
Sbjct: 434 CNTLLDGLCDNGKLKDALEMF-KAMQKS 460
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 18/283 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV----KVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M G P I + L+ C+ K V K+ H+ + TY+ L+ G
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG---LVANTITYTTLIHGFCQ 408
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-------- 108
VG+L+ A+ L EM+ +++ N+LL+ +C G + +A M + M+
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468
Query: 109 ---GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G EPD +Y+I I + + M +VP+ TYN +I LCK ++
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+EA Q+ D M + +P+ ++ ++ +C V+ L L M + ++ + TY +
Sbjct: 529 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 588
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 589 IHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKE 631
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
MV G+ P++ + LL LC +K A + F +A H F P V+TY+
Sbjct: 422 MVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYN 481
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ EA +L++EM R D + +NS++ +CK +DEA M M S
Sbjct: 482 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK 541
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ +++ I+ +C+A + + M R +V N TY +I K + A
Sbjct: 542 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGA 601
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ EM+ G PD + +L + E+ A+ ++
Sbjct: 602 LDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 12/258 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ + L+H C+ + A P V T + L+ GL D G+
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446
Query: 60 LSEARKLFDEMLERKCPVD-----------ILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
L +A ++F M + K +D + +N L+ + G EA + EM
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD +Y+ IH C+ + + ++ DSM + PNV T+ +I CK +V++
Sbjct: 507 GIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 566
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L EM RG + +Y ++ +N AL + M V PD T +L
Sbjct: 567 LELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTG 626
Query: 229 LVRVGRFDRATEVWESME 246
L RA + E ++
Sbjct: 627 LWSKEELKRAVAMLEDLQ 644
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 74/312 (23%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G ++ L +A LF +M+ + ++ L+ + + G +D + R+M
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 110 AEPDAFSYSIFIHAFCEANDIH---SVF--------------------------RVLDSM 140
+A+S++I + FC + + S F R+ +++
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 141 KRYNLV--PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
++ + PNV T+ ++ LC+ +V EA LLD M+E G P++ +Y I+ C
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228
Query: 199 EVNMALRLITRM-----TKENVM------------------------------------- 216
+ AL L+ +M K NV+
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TYN ++ V+ G+F A E+++ M RG PS TYS M+ G CK+ +L+ A
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN-RLDAAEH 347
Query: 277 YFEMMVDEGIPP 288
F +M +G P
Sbjct: 348 MFYLMATKGCSP 359
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 5/295 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +PS L+ LC + A Q FD E F P V TY L+ GL +
Sbjct: 71 ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQ 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA LF +ML + + ++SL+ +C G+ EA + M PD +++
Sbjct: 131 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 190
Query: 120 FIHAFCEANDIH---SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ A C+ I + + M + L+P+ TYN +I LC ++ +A L EM+
Sbjct: 191 LVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 250
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G PD +Y + Y C + A+ L+ + N+ PD H Y++V+ + R G +
Sbjct: 251 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELE 310
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
A +++ + +G +P V TY++M++GLC ++G L EA K F M + I YS+
Sbjct: 311 AARDLFSKLSSKGLHPDVRTYTIMINGLC-QQGLLAEASKLFGEMDENDIESYST 364
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ +S L+ + + S L+ +M P + N L+ + C + A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L ++ +G +P +++ I C I ++ D M P+V TY +I LCK
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ ++ EA L +M+ +G +P+ ++Y++++ C A+RL M +MPD+ T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 222 YNMVLKLLVRVGRF---DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+N ++ L + G D+A ++E M ++G P TY+ ++HGLC G+L +A F
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC-HVGRLRDAIALF 246
Query: 279 EMMVDEGIPPYSSTVEMLRNRL 300
MV G P T +L + L
Sbjct: 247 HEMVVYGQIPDLVTYRILFDYL 268
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%), Gaps = 2/237 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML + P I+ + LL ++ + + + ++M S G + ++ +I I++FC N
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ F VL + + P+ T+ +IR LC K+ EA QL D+M G PD +Y
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L + M + + P+ TY+ ++ L +G + A ++ +M R
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180
Query: 250 FYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
P T++ +V LCK+ +++A FE M +G+ P + T L + L +G
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 237
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 43/330 (13%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+ + +A Q + K + F ++ L++GL D G + EA +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F M + C D++ + +L+ A+CKAG DEA GMLREM + G PD ++S I C+
Sbjct: 67 FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 127 ANDIHSVFRVLDSM--------------------KRYNLV----------------PNVF 150
FRVL+ + +YN V P V
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+N +I CK + ++ AY+LL+ MIE+G P+ +++ ++ C V A +L+ +M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
P+ TY+ V+ L + G+ D A E+++ ME+R P+V T+++++ GLCK K +
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK-R 304
Query: 271 LEEACKYFEMMVDEGIPP----YSSTVEML 296
+EEA + + M + G P Y+S ++ L
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGL 334
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 71/352 (20%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L+ LC V A + F + P V TY+ LV L G+ EA+ + EM+ R C
Sbjct: 50 LMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGC 109
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS----------------- 116
D + ++L++ +CK G+ ++A +L ++ R +G AF
Sbjct: 110 APDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELAS 169
Query: 117 -----------------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+++ I+ FC+A D+ S +++L+ M VPNVFT+ +I L
Sbjct: 170 KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 229
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK +V EA QLL++M+ G +P+ +Y+ ++ C + +V+ A L M + N P+
Sbjct: 230 CKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNV 289
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK------------ 267
T+N+++ L + R + A +++ M + G P + TY+ ++ GLCK
Sbjct: 290 VTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT 349
Query: 268 -----------------------KGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G++ +AC+ F M+VD+G P +T L
Sbjct: 350 IPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 151/303 (49%), Gaps = 4/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC-KRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVG 58
+++ G+ S + ++ LC K V++A + FTPTV +++++ G
Sbjct: 139 VIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAK 198
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L A KL + M+E+ C ++ L+ +CKA + EA +L +M + G P+ +YS
Sbjct: 199 DLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYS 258
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + + + M+R N PNV T+N +I LCK +++EEA QL M E
Sbjct: 259 TVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET 318
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-MPDRHTYNMVLKLLVRVGRFDR 237
G PD +YN+++ C +V+ A +L + + V + TY+ + +GR
Sbjct: 319 GCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD 378
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ + +GF P ++TY+ ++ CK + E + E M +G PP +T+ +
Sbjct: 379 ACRIFSMLVDKGFSPDLATYTSLILEYCKTS-RAVEVVELVEEMASKGFPPRVNTLSAVL 437
Query: 298 NRL 300
L
Sbjct: 438 GGL 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 177/415 (42%), Gaps = 78/415 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P+++ L+ LCK V A Q + +P V TYS ++ GL G+
Sbjct: 210 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQ 269
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +LF M R CP +++ HN L++ +CKA I+EA + MR G PD +Y+
Sbjct: 270 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329
Query: 120 FIHAFCEANDIHSVF------------------------------RVLDSMKRYNLV--- 146
I C++ + F R+ D+ + ++++
Sbjct: 330 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389
Query: 147 ---PNVFTYNCIIRKLCKNEK-----------------------------------VEEA 168
P++ TY +I + CK + E A
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 449
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE---NVMPDRHTYNMV 225
QL D M RG D YN ++ ++ N AL ++ ++ + P + +
Sbjct: 450 IQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDAL 509
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L +VGR D A ++ M +RGF +VS+Y+ ++ GL + + + +EA + FE MV G
Sbjct: 510 VESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQ-RWDEATQVFEAMVSAG 568
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKS 340
P STV ++ + L +D L +M + C E N + G G+ KS
Sbjct: 569 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIG--GYCKS 621
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 6/324 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK--TYSILVRGLGDVG 58
M E G P I + L+ LCK V A Q F TYS L G +G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+++A ++F ++++ D+ + SL+ CK E ++ EM S G P + S
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 434
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-- 176
+ E N ++ DSM + YN ++ + + K +A +L+++I
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494
Query: 177 -ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+R NP + +A++ C + A +L+ +M++ +YN +L L R+ R+
Sbjct: 495 RDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRW 554
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D AT+V+E+M G P +ST +V++ LC K+++A + + M G P T
Sbjct: 555 DEATQVFEAMVSAGPAPEISTVNVVISWLC-SAAKVDDAYELVQRMSKLGCCPDIETCNT 613
Query: 296 LRNRLVGLGFLDIIEILADKMERS 319
L G D+ L ++M +
Sbjct: 614 LIGGYCKSGRADLARKLLEEMTEA 637
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G P + L+ CK + + A F P V T S ++ GL +
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM---RSIGAEPDAFS 116
A +LFD M R C D L +N ++E M +A ++A +L ++ R P + +
Sbjct: 446 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSA 505
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ + C+ ++L M V +YN ++ L + ++ +EA Q+ + M+
Sbjct: 506 VDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMV 565
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ + N ++++ C A+V+ A L+ RM+K PD T N ++ + GR D
Sbjct: 566 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRAD 625
Query: 237 RATEVWESMEKRGFYPSVSTYSVM 260
A ++ E M + G P+ +T+ ++
Sbjct: 626 LARKLLEEMTEAGLEPNDTTHDLL 649
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE------------------- 111
+ R C + + L+ AG++D A +L EM+S G E
Sbjct: 1 MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 112 ---------------PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
PD +Y+ +HA C+A +L M P+ T++ +I
Sbjct: 61 VEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR-AEVNMALRLITRMTKENV 215
LCK E+A+++L+++I+RG + ++ I+ C++ V +A +++ + +
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P +N+V+ + D A ++ E M ++G P+V T+++++ GLCK ++ EA
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN-RVGEAQ 239
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ E MV G P T + N L G +D L MER
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 282
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 153/302 (50%), Gaps = 3/302 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G P++ + + LC+R +VK A H + P V T++ L+ GL +G
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A +LF ++++ ++ + ++ CK G + A +L M G P+ +Y+
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH C+ F +++ MK +PN++TYN II CK K++EAY++L +
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQ 421
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G + D+ +Y ++ HC + + AL L +M +++ PD HTY ++ + + + +++
Sbjct: 422 GLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQS 481
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++++ G P+ TY+ M+ G C + GKL A K FE MV G P S T L +
Sbjct: 482 QQLFDKCLSIGLVPTKQTYTSMIAGYC-RLGKLTSALKVFERMVQHGCLPDSITYGALIS 540
Query: 299 RL 300
L
Sbjct: 541 SL 542
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 2/263 (0%)
Query: 25 HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
H + A A P +++ LV G G EA L M + +D
Sbjct: 162 HAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTV 221
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ A C+ G + R M +G P+ +YS +I CE + F VL+ M
Sbjct: 222 VVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG 281
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMA 203
L PNV+T+ +I LCK +E A++L ++++ + P+ +Y ++ +C ++ A
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA 341
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L+ RM ++ + P+ +TY ++ + G FDRA E+ M+ GF P++ TY+ ++ G
Sbjct: 342 EMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGG 401
Query: 264 LCKKKGKLEEACKYFEMMVDEGI 286
C KKGK++EA K M +G+
Sbjct: 402 FC-KKGKIQEAYKVLRMATSQGL 423
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 151/349 (43%), Gaps = 41/349 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MV G+KP++Y L+ LCK ++ A + F + P V TY++++ G G
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336
Query: 59 ELSEARKLFDEMLERKCPVD-----------------------------------ILAHN 83
+L+ A L M+E+ + I +N
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYN 396
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+++ CK G I EA+ +LR S G D +Y+I I C+ I + M
Sbjct: 397 AIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEK 456
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P++ TY II C+ ++E++ QL D+ + G P + +Y +++A +C ++ A
Sbjct: 457 SCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSA 516
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L++ RM + +PD TY ++ L + R + A ++E+M + P T + +
Sbjct: 517 LKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYE 576
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
C++ K+ A + + + + T + L +L +G LD +
Sbjct: 577 YCRRD-KITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLF 621
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 9/268 (3%)
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAM-----CKAGNIDEAHGMLREMRSIGA 110
+ G L EA + E+ P+ + N +L C A + GM R + G
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARA--AGGV 177
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD S+ + C +L +M + T ++R C+ +
Sbjct: 178 RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M E G P+ +Y+A + C+R V A ++ M + + P+ +T+ ++ L
Sbjct: 238 LFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297
Query: 231 RVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
++G +RA ++ + K Y P+V TY+VM+ G CK+ GKL A MV++G+ P
Sbjct: 298 KIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE-GKLARAEMLLGRMVEQGLAPN 356
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKME 317
++T L + G D L +KM+
Sbjct: 357 TNTYTTLIHGHCKGGSFDRAFELMNKMK 384
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 156/292 (53%), Gaps = 10/292 (3%)
Query: 8 PSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
P + D +L +L K KH + + QF N TP + T +IL+ + ++ A
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNG---VTPNLCTLNILINCFCHLAHITFA 147
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F +L+R D + N+L++ +C G I A ++ + G + D SY I+
Sbjct: 148 FSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLING 207
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A + +V R+L ++ +++ P+V Y II LCKN++V +A L EMI +G +P+
Sbjct: 208 LCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPN 267
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ C + A L+ M +N+ PD +T+N+++ L + G+ D A ++E
Sbjct: 268 VFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFE 327
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTV 293
M+ + +P++ TY+ ++ GLCK LE A + M ++GI P YS T+
Sbjct: 328 EMKHKNMFPNIVTYTSLIDGLCKNH-HLERAIALCKKMKEQGIQPDVYSYTI 378
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 159/314 (50%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ L+ L++ C H+ A F N K + P T + L++GL GE+ A
Sbjct: 123 GVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRA 182
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + +D +++ +L+ +CKAG +LR++ +PD Y+ IH
Sbjct: 183 LYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHC 242
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M + PNVFTYN +I C ++EA+ LL+EM + NPD
Sbjct: 243 LCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPD 302
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N ++ +++ A+ L M +N+ P+ TY ++ L + +RA + +
Sbjct: 303 VYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 362
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+++G P V +Y++++ LC K G+LE A ++F+ ++ +G T ++ N L
Sbjct: 363 KMKEQGIQPDVYSYTILLDALC-KGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 421
Query: 304 GFLDIIEILADKME 317
G + L KME
Sbjct: 422 GLFGDVMDLKSKME 435
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 7/282 (2%)
Query: 11 YDLDQ-----LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
+ LDQ L++ LCK K + + H P V Y+ ++ L + +A
Sbjct: 194 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDAC 253
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ EM+ + ++ +N+L+ C GN+ EA +L EM+ PD ++++I I A
Sbjct: 254 DLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ I + + MK N+ PN+ TY +I LCKN +E A L +M E+G PD
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+SY +L C + A + + + + TYN+++ L + G F ++
Sbjct: 374 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 433
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
ME +G P T+ ++ L +K ++A K+ M+ G+
Sbjct: 434 MEGKGCMPDAITFKTIICALFEKDEN-DKAEKFLREMIARGL 474
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+++ + L++ C ++K A + K P V T++IL+ LG G+
Sbjct: 259 MIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGK 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+EM + +I+ + SL++ +CK +++ A + ++M+ G +PD +SY+I
Sbjct: 319 IDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 378
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ A C+ + + + + K Y+L NV TYN +I LCK + L +M
Sbjct: 379 LLDALCKGGRLENAKQFFQHLLVKGYHL--NVRTYNVMINGLCKAGLFGDVMDLKSKMEG 436
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+G PD ++ I+ ++ E + A + + M ++
Sbjct: 437 KGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ ML + P +++L ++ K + + ++ +S G P+ + +I I+ FC
Sbjct: 81 FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I F V ++ + P+ T N +I+ LC +++ A D+++ +G D+ S
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C E RL+ ++ +V PD Y ++ L + R A +++ M
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G P+V TY+ +++G C G L+EA M + I P T +L + L G +
Sbjct: 261 VKGISPNVFTYNTLIYGFC-IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKI 319
Query: 307 D 307
D
Sbjct: 320 D 320
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 174/339 (51%), Gaps = 12/339 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G ++Y+ + LL LC+ + K + ++ P V +Y+ ++RG + E
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +L +EM C ++ L++A CKAG +DEA G+L+EM+ G E D Y+
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ ++ + D + P TYN +IR CK +++EA ++ + M+ERG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y ++ C + AL+L+ M +++ P+ TYN+++ L + A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV------DEGIPPYSSTV 293
E+ E M+KR P TY+ ++ GLC KG L+EA K +M+ D + +++ +
Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISFNALI 431
Query: 294 EML--RNRLVGLGFLDIIEILADKMERSTSCTIQELANA 330
L NRL LDI ++L +K+ T L N+
Sbjct: 432 HGLCKGNRLHQA--LDIYDLLVEKLGAGDIVTTNILLNS 468
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 165/371 (44%), Gaps = 46/371 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G++P++Y L+ LC K A Q + + + P V TY+I++ L
Sbjct: 308 MMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSL 367
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSY 117
+++A ++ + M +R+ D + +NSLL +C G++DEA +L M S +PD S+
Sbjct: 368 VADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISF 427
Query: 118 SIFIHAFCEANDIHSVFRVLD-----------------------------------SMKR 142
+ IH C+ N +H + D +
Sbjct: 428 NALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISN 487
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+VPN TY +I CK + A LL +M P + YN +L+ C + ++
Sbjct: 488 SKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQ 547
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A RL M +++ PD ++N+++ ++ G A + M G P + TYS +++
Sbjct: 548 AWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLIN 607
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADK--- 315
K G L+EA +F+ M+D G P + + + + G D ++ L DK
Sbjct: 608 RFLKL-GYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVV 666
Query: 316 MERSTSCTIQE 326
+++ +CT+ +
Sbjct: 667 LDKELTCTVMD 677
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 124/242 (51%), Gaps = 1/242 (0%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + +MLE ++ ++ + LLE + AHG+L M G + ++Y+I +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + +L M++ +L+P+V +YN +IR C+ +++E+A QL +EM G +
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ C +++ A+ L+ M + + D Y +++ G DR ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ + +RG P TY+ ++ G C K G+L+EA + FE M++ G+ P T L + L G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFC-KLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCG 329
Query: 303 LG 304
+G
Sbjct: 330 VG 331
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 3/284 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L A +F + ++ + A N+L+ + ++ N + A R+M + S S
Sbjct: 53 QLKNAVSVFQQAVDSGGSLS-FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLS 111
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ F + VL M + NV+ YN +++ LC+N + +A LL EM +
Sbjct: 112 GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQN 171
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD SYN ++ C+ E+ AL+L M T+ +++ + G+ D A
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + M+ +G + Y+ ++ G C G+L+ F+ +++ G P + T L
Sbjct: 232 MGLLKEMKHKGLEADLIVYTSLIRGFC-DCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 299 RLVGLGFL-DIIEILADKMERSTSCTIQELANAMRGKTGFRKSR 341
LG L + EI MER + + G G K++
Sbjct: 291 GFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTK 334
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
I P+ ++ CK + VA + E P+V Y+ L+ L G L +A
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF+EM D+++ N +++ KAG+I A +L M G PD F+YS I+ F
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + D M P+ + +++ + ++ + + +++++ D+
Sbjct: 610 LKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDK 669
Query: 185 WSYNAILAYHCDRA-EVNMALRLI 207
++ Y C + +++A RL+
Sbjct: 670 ELTCTVMDYMCSSSGNMDIAKRLL 693
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 150/291 (51%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G P+++ + LL LC + A Q + + P V +Y+ ++ G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L +A + EML+R +++ ++S++ A+CKA +D+A +L M G P+ +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H +C + L M + P+V TYN ++ LCKN + EA ++ D M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +Y +L + + + L+ M + + P+ + +++++ + G+ D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V+ M ++G P TY ++ LC K G++E+A +YFE M+DE + P
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILC-KSGRVEDAMRYFEQMIDERLSP 442
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + L+ LCK A + FD+ K P + TY L++G G L E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ + + L+ A K G +D+A + +MR G PD +Y I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + R + M L P YN +I LC +K ++A +L+ EM++RG D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N+I+ HC V + +L M + V PD TY+ ++ G+ D AT++
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SM G P TY+ +++G CK ++E+A F M G+ P
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKIS-RMEDALVLFREMESSGVSP 582
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ ++ ALCK + + A + + K+ P +TY+ +V G G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA M M G +P+ +Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ +I K KV++A + +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C V A+R +M E + P YN ++ L ++D+A
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG ++ ++ C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L+ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 49 GRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168
Query: 121 IHAFCEAND----------------------------IHSVFRVLDSMKRY--------- 143
+ C+ N I+ F+ D K Y
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TY+ II LCK + +++A ++L M++ G P+ +YN+I+ +C + A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
KG L E ++MV GI P
Sbjct: 349 Y-ATKGALVEMHGLLDLMVRNGIHP 372
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M++ + + +NSL+ ++C D+A ++ EM G D ++
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TY+ +I C K++EA +LL M+ G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ + + G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 663
Query: 300 LVGLG 304
L+ +G
Sbjct: 664 LLKVG 668
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 113/210 (53%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + E+ KLFD M+ DI+ +++L++ C AG +DEA +L M S+G +PD +Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + + + M+ + P++ TYN I++ L + + A +L + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN IL C + ALR+ + ++ + T+N+++ L++VGR D
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
A +++ ++ G P V TYS+M L ++
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR DE+ C IL + + C AG +D L + G DA +++ +
Sbjct: 80 ARAGADEVTPNLCTYGIL-----IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 123 AFC------EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C +A DI VL M + +PNVF+YN +++ LC + +EA +LL M
Sbjct: 135 GLCADKRTSDAMDI-----VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 177 ERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+ G + PD SY ++ +++ A M ++P+ TY+ ++ L +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D+A EV SM K G P+ TY+ +VHG C G+ +EA + + M +G+ P T
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC-SSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 295 MLRNRL 300
L + L
Sbjct: 309 SLMDYL 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP + L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK DEA M + + + + +++I
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY+ + L + +EE L M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ N+I+ R ++ A + + +++ + T ++ L LL
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N LA H A V+ R+ R + V P+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRM-ARAGADEVTPNLCTY 94
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D ++ K+GF ++ ++ GLC K
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 140
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P + LL LC K + A H D+ P V +YS ++ G
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ + LF EM++R P D++ + ++++ +CKA D A + ++M G +P+ +
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDT 275
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + V R+L+ M PN TY ++ LCKN + EA D MI
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G P +Y +L + + ++ L+ M + P+ H +N+ + G D
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIID 395
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A +++ M ++G P +Y ++ LC K G++++A F M++EG+ P
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALIDALC-KLGRVDDAEVKFNQMINEGVTP 446
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P I L++ LC K KV FF+ P + ++ ++ L G
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E ++L D + D++++N+L++ C AG IDEA +L M S+G +PD+FSY+
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C+A I S + M + P V TYN I+ L + ++ EA +L MI G
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN IL C V+ A+++ + + + + T+N+++ L++ GR + A
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ ++ G +V TY ++V L ++G LEE F M G P S + L R
Sbjct: 679 DLFAAIPANGLVQNVVTYRLVVENLI-EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 737
Query: 300 LVGLG 304
L+ G
Sbjct: 738 LLHRG 742
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GIKPS+ +LH + + H + + +P ++I G
Sbjct: 334 MIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGI 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +F++M ++ D +++ +L++A+CK G +D+A +M + G PD +S
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSS 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C + V + M + PN+ +N I+ LCK +V E +L+D + G
Sbjct: 454 LVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG 513
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ HC ++ A +L+ M + PD +YN +L + GR D A
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M G P V TY+ ++HGL + K + EA + + M++ G T ++ N
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTK-RFSEAKELYLNMINSGTKWDIYTYNIILNG 632
Query: 300 L 300
L
Sbjct: 633 L 633
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ + + A K + A F+ + + +P +Y L+ L +G
Sbjct: 369 MVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ DI+ +SL+ +C ++ + EM ++G P+ ++
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + R++DS++ + P+V +YN +I C ++EA +LL+ M+ G
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +SYN +L +C ++ A +M + P TYN +L L + RF A
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E++ +M G + TY+++++GLCK ++EA K F+ + +G+
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNC-VDEAIKMFQNLCSKGL 654
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 135/324 (41%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHA-LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+KP+I + L+H L K +V + + P TY L+ L G
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EAR FD M+ + + + +L G + E H +L M + G P+ ++I
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F A+ + I + + M++ L P+ +Y +I LCK +V++A ++MI G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443
Query: 180 ANP---------------DEWS--------------------YNAILAYHCDRAEVNMAL 204
P D+W +N IL C V
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ + V PD +YN ++ G D A+++ E M G P +Y+ ++HG
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K G+++ A +F M+ GI P
Sbjct: 564 C-KAGRIDSAYSHFRKMLSNGITP 586
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 30/313 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP + + LLH CK + A+ F + TP V TY+ ++ GL
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ DI +N +L +CK+ +DEA M + + S G + + +++I
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LV NV TY ++ L + +EE L M + G
Sbjct: 664 MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK------------ 227
P+ NA++ R +++ A ++++ + N + T +M++
Sbjct: 724 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAK 783
Query: 228 ----------------LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
L+ + R D A ++ M +G P V TY+ ++HGL + G+
Sbjct: 784 SLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF-QTGRF 842
Query: 272 EEACKYFEMMVDE 284
EA + + M++
Sbjct: 843 SEAKELYLSMINS 855
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 5/256 (1%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TYSIL+ +G L F +L+ +D + N LL +C + EA
Sbjct: 91 APNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMD 150
Query: 101 -MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM---KRYNLVPNVFTYNCII 156
+L+ M +G PD SY+I + C +L M + ++ PNV +Y+ +I
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+V++ Y L EM++RG PD +Y ++ C + A + +M V
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ TYN ++ + +G++ + E M G P+ TY +++ LC K G+ EA
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLC-KNGRCREARF 329
Query: 277 YFEMMVDEGIPPYSST 292
+F+ M+ +GI P +T
Sbjct: 330 FFDSMIGKGIKPSVTT 345
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 50 LVRGLGDVGELSEARK-LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--- 105
L+ GL D + EA L M E C D +++N LL+ +C +EA +L M
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ P+ SYS I+ F + + + M + P+V TY +I LCK +
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ A + +MI+ G P+ +YN ++ + + +R++ M+ P+ TY +
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L L + GR A ++SM +G PSV+TY +M+HG K G L E +MV G
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATK-GALSEMHDLLNLMVANG 373
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
I P + + G +D + +KM +
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQ 406
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 22/306 (7%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN-----------IDEAHGMLR 103
G +G L +A KLFDE+L P ++A N LL A+ ++ + + M+R
Sbjct: 26 GSLG-LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVR 84
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+ I P+ +YSI I FC + F + + + N ++ LC +
Sbjct: 85 DCY-IKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGK 143
Query: 164 KVEEAYQ-LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM---PDR 219
+V EA LL M E G PD SYN +L C+ AL L+ M + V P+
Sbjct: 144 RVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNV 203
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+Y+ V+ G+ D+ ++ M RG P V TY+ ++ GLCK + + A F+
Sbjct: 204 VSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ-LFDRAEAVFQ 262
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLG----FLDIIEILADKMERSTSCTIQELANAMRGKT 335
M+D G+ P T L + + +G + ++E ++ + CT L N +
Sbjct: 263 QMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322
Query: 336 GFRKSR 341
R++R
Sbjct: 323 RCREAR 328
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 147/360 (40%), Gaps = 30/360 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G K IY + +L+ LCK V A + F N + T++I++ L G
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF + +++ + ++E + + G+++E + M G P++ +
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE---------------- 163
+ DI L + N T + +I +E
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793
Query: 164 ------------KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
++++AY L EM+ +G PD +YN IL + A L M
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ +TYN++L L + D A ++++S+ +G ++ T+++M+ L K G+
Sbjct: 854 NSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKG-GRK 912
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
E+A F + G+ P T ++ L+ G L+ + L ME+S + L NA+
Sbjct: 913 EDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNAL 972
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
TP V TY+ ++ GL G SEA++L+ M+ + ++I +N +L +CK+ +DEA
Sbjct: 822 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAF 881
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
M + + S G + + +++I I A + + ++ LVP+V TY + L
Sbjct: 882 KMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENL 941
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+ +EE L M + G D NA++ R +++ A ++++ ++N +
Sbjct: 942 IEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEA 1001
Query: 220 HTYNMVLKLLVR 231
T + ++ L R
Sbjct: 1002 STTSELISLFSR 1013
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF EML + D++ +N++L + + G EA + M + + + ++Y+I
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C++N + F++ S+ L N+ T+N +I L K + E+A L + G
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y + + + L M K D N +++ L++ G RA
Sbjct: 927 LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++++ F ST S ++
Sbjct: 987 AYLSKLDEKNFSLEASTTSELI 1008
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 7/181 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ + +IY + +L+ LCK V A + F + + T++I++ L G
Sbjct: 852 MINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGR 911
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF + D++ + + E + + G+++E G+ M G D+ +
Sbjct: 912 KEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNA 971
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE------KVEEAYQLLD 173
+ + DI L + N T + +I + E + E Y+LL+
Sbjct: 972 LVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLN 1031
Query: 174 E 174
E
Sbjct: 1032 E 1032
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 155/303 (51%), Gaps = 8/303 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G P+++ + LL LC + A Q + + P V +Y+ ++ G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L +A + EML+R +++ ++S++ A+CKA +D+A +L M G P+ +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H +C + L M + P+V TYN ++ LCKN + EA ++ D M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +Y +L + + + L+ M + + P+ + +++++ + G+ D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
A V+ M ++G P TY ++ LC K G++E+A +YFE M+DE + P Y+S +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILC-KSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 294 EML 296
L
Sbjct: 452 HSL 454
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + L+ LCK A + FD+ K P + TY L++G G L E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ + + L+ A K G +D+A + +MR G PD +Y I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + R + M L P YN +I LC +K ++A +L+ EM++RG D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N+I+ HC V + +L M + V PD TY+ ++ G+ D AT++
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SM G P TY+ +++G CK ++E+A F M G+ P
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKIS-RMEDALVLFREMESSGVSP 582
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ ++ ALCK + + A + + K+ P +TY+ +V G G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA M M G +P+ +Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ +I K KV++A + +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C V A+R +M E + P YN ++ L ++D+A
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG ++ ++ C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L+ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 49 GRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168
Query: 121 IHAFCEAND----------------------------IHSVFRVLDSMKRY--------- 143
+ C+ N I+ F+ D K Y
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TY+ II LCK + +++A ++L M++ G P+ +YN+I+ +C + A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
KG L E ++MV GI P
Sbjct: 349 Y-ATKGALVEMHGLLDLMVRNGIHP 372
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M++ + + +NSL+ ++C D+A ++ EM G D ++
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TY+ +I C K++EA +LL M+ G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ + + G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 663
Query: 300 LVGLG 304
L+ +G
Sbjct: 664 LLKVG 668
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 113/210 (53%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + E+ KLFD M+ DI+ +++L++ C AG +DEA +L M S+G +PD +Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + + + M+ + P++ TYN I++ L + + A +L + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN IL C + ALR+ + ++ + T+N+++ L++VGR D
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
A +++ ++ G P V TYS+M L ++
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR DE+ C IL + + C AG +D L + G DA +++ +
Sbjct: 80 ARAGADEVTPNLCTYGIL-----IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 123 AFC------EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C +A DI VL M + +PNVF+YN +++ LC + +EA +LL M
Sbjct: 135 GLCADKRTSDAMDI-----VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 177 ERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+ G + PD SY ++ +++ A M ++P+ TY+ ++ L +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D+A EV SM K G P+ TY+ +VHG C G+ +EA + + M +G+ P T
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC-SSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 295 MLRNRL 300
L + L
Sbjct: 309 SLMDYL 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP + L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK DEA M + + + + +++I
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY+ + L + +EE L M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ N+I+ R ++ A + + +++ + T ++ L LL
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N LA H A V+ R+ R + V P+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRM-ARAGADEVTPNLCTY 94
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D ++ K+GF ++ ++ GLC K
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 140
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 157/314 (50%), Gaps = 5/314 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P I ++ LCK ++ A F+ + PT TY+ L+ G G++ EA
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFE--EMSCAPTAITYNSLIGGYCRAGDMDEAI 266
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M++ KC D++ + +L+ A CK G +D+A+ + ++M + PD +++ +
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ + R P ++TYNC++ CK +V +A +L+ + RG P+
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKEN--VMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+YN ++A C + AL+ + ++ E Y ++L L R GR D A + +
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 446
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E M +RG+ P+ +T++ +V LCK + ++A + E M+ G P T + + +
Sbjct: 447 EEMIQRGYVPAAATFATVVFALCKAH-QPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505
Query: 303 LGFLDIIEILADKM 316
G + + LA ++
Sbjct: 506 AGMIQKADELASEL 519
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 42/330 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN------------------------- 35
M E G P++ + ++ C+ + V AH F +
Sbjct: 135 MAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD 194
Query: 36 -----------AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
+ FTP + TYS ++ GL G L +A +F+EM C + +NS
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNS 251
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ C+AG++DEA +L +M PD +Y+ + AFC+ + + + M
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L P+V T+ ++ LC ++E+A +LL+E+ RG P ++YN ++ +C +V A
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG--FYPSVSTYSVMVH 262
L+ +P+ TYN+++ R GR D+A + + + G SV+ Y++++
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
LC + G+ ++A +++E M+ G P ++T
Sbjct: 432 ALC-RDGRTDDAVQFYEEMIQRGYVPAAAT 460
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 4/292 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
++ LC+ ++ A + P TY+ LV GL L +A ++ EM+ +
Sbjct: 11 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARH 70
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D +++++C +D+A ++ EM G +A +YS + C+ +
Sbjct: 71 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 130
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
++++M P V TYN II C+ +V+EA+ +++M+ G +PD +Y A++ C
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC 190
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+V L L+ +T+ PD TY+ V+ L + GR A +++E M P+
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAI 247
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
TY+ ++ G C + G ++EA + MVD+ P T L + +G LD
Sbjct: 248 TYNSLIGGYC-RAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L HN ++ +C+AG + A G+ R+M PD +Y+ +H +A + +VL
Sbjct: 6 LLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQE 64
Query: 140 MKRYNLVP-----------------------------------NVFTYNCIIRKLCKNEK 164
M VP N TY+ ++ LCK E+
Sbjct: 65 MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA L++ M ERG P +YN+I+ C V+ A + +M E PD TY
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + R E+ + +RGF P + TYS ++ GLC K G+L +A FE M
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC-KAGRLRDAVDIFEEM 240
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI P ++ + +++A CK V A F ++ P + TY L+ G +G+
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYS 118
+ A+ + M E+ +++ + L++ CK +DEA +LR M+ A PD +Y
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I +C I R+LD M R L N+F N +I CK ++ EA ++ M++
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +SYN +L +C + A L +M +E + P TYN +LK L RVG FD A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 239 TEVWESMEK-----------------------------------RGFYPSVSTYSVMVHG 263
++W M K RGF S T++ M+ G
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
LC K GK+ EA + F+ M D G P T L
Sbjct: 517 LC-KMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 44/335 (13%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
EF P+++D+ +L ++ K A FDN K P++++ + L+ L GE
Sbjct: 151 EFAFSPTVFDM--ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 208
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A ++ +M+ D+ + ++ A CK G +DEA G +++M ++G EP+ +Y I
Sbjct: 209 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 268
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK-------------------- 161
+ + D+ + VL M + NV TY +I+ CK
Sbjct: 269 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328
Query: 162 ----------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
K+++A +LLDEM+ G + + N+++ +C R E++ A
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ITRM N+ PD ++YN +L R G A + + M + G P+V TY+ ++ GLC
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448
Query: 266 KKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ G ++A + + +M+ G+ P YS+ ++ L
Sbjct: 449 -RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+K +++ + L++ CKR + A P +Y+ L+ G G
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+ML+ +L +N+LL+ +C+ G D+A + M G PD YS
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + T+N +I LCK K+ EA ++ D+M + G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ +C + V A ++ M +E + P YN ++ L + R T
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA-CKYFEMMVDEGIPPYSSTVEMLRN 298
++ M RG P++ TY ++ G C K+G L++A YFE M + G+ + +
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWC-KEGMLDKAFSSYFE-MTENGLSANIIICSTMVS 655
Query: 299 RLVGLGFLDIIEILADKM 316
L LG +D +L KM
Sbjct: 656 GLYRLGRIDEANLLMQKM 673
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 167/386 (43%), Gaps = 69/386 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV++ +KP Y + LL C+ H A D E PTV TY+ L++GL VG
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 60 LSEARKLFDEMLERKCPVD--------------------------ILAH---------NS 84
+A +++ M++ D ILA N+
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ +CK G + EA + +M+ +G PD +Y I +C+A+++ F+V +M+R
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P++ YN +I L K+ ++ E LL EM RG P+ +Y A++ C ++ A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP------------ 252
MT+ + + + ++ L R+GR D A + + M GF+P
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692
Query: 253 ------------SVST--------YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S T Y++ + GLC K GK+++A ++F M+ +G P + T
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC-KTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 293 VEMLRNRLVGLGFLDIIEILADKMER 318
L + G +D L D+M R
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLR 777
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+I L+ CK + K +F+ ++ + + S +V GL +G + EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Query: 64 RKLFDEM----------------------------LERKCPVDILAHNSL----LEAMCK 91
L +M L+ C +L +N + + +CK
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G +D+A + G PD F+Y IH + A ++ FR+ D M R LVPN+ T
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCK+E V+ A +L ++ ++G P+ +YN ++ +C ++ A +L +M
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+E + P TY+ ++ L + G +R+ ++ M K G + Y +V G
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L+H +V A + D + P + TY+ L+ GL + A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++LF ++ ++ +++ +N+L++ CK GN+D A + +M G P +YS I+
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN-- 181
C+ DI ++L+ M + + + Y +++ K E + E +++ N
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSK--PEALKQNMNCF 921
Query: 182 -----PDEWSYNAILAYHC 195
W + ++A C
Sbjct: 922 LLPKFKHSWKFVGVVALDC 940
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I + L++ LCK ++V A + F + P V TY+ L+ G +G
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A KL D+M+E ++ +++L+ +CK G+I+ + +L +M G + Y
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 120 FIHA 123
+
Sbjct: 895 LVQG 898
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 146/282 (51%), Gaps = 18/282 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG +P Y LL ALCK VK A + F++ + VG++
Sbjct: 202 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-----------------VGKM 244
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M E DI+ + +LL AG + +A+ +LR+MR G EP+A Y++
Sbjct: 245 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 304
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C+ + + +V M+RY +V TY ++ CK K+++ Y +LD+MI++G
Sbjct: 305 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 364
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P E +Y I+ H + L L+ +M + PD YN+V++L ++G A
Sbjct: 365 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 424
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+W ME+ G P V T+ +M++GL +G L EA +F+ M+
Sbjct: 425 LWNEMEENGLSPGVDTFVIMINGLA-SQGCLLEASDHFKEML 465
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 24/258 (9%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---E 111
GD G L ++ R C I + S+++ + K G++ EMR E
Sbjct: 117 GDAGNLGYRFFVWAAKQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIE 175
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P+ F + + F A+ + VLD M ++ P+ + + C++ LCK+ V++A +L
Sbjct: 176 PELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 233
Query: 172 LD-----------------EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+ +M E G PD Y +L+ + + ++ A L+ M +
Sbjct: 234 FEDMRMRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 293
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
P+ + Y ++++ L +V R + A +V+ ME+ V TY+ +V G C K GK+++
Sbjct: 294 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC-KWGKIDKC 352
Query: 275 CKYFEMMVDEGIPPYSST 292
+ M+ +G+ P T
Sbjct: 353 YIVLDDMIKKGLMPSELT 370
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P+ ++ LC + V A D H+ Y+ ++ G + G+
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR+ FDEM + D + + +L+ +C+AG + EA +L+EM + + D +Y++
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ + F+V ++M + + PNV TY + LCK V+ A +LL EM +G
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN+++ C ++ A+R + M + PD +TY ++ L + G DRA
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + M G P++ TY+V+++G C G++E K E M+++ I P ++T L
Sbjct: 560 DLLQEMLDNGIKPTIVTYNVLMNGFC-MSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 142/258 (55%), Gaps = 5/258 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY++LV G G+++EA ++ + M++R +++ + +L + +CK G++ A+ +L EM
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G E +A +Y+ I+ C+A + R + M L P+V+TY +I LCK+ ++
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ A+ LL EM++ G P +YN ++ C V +L+ M ++N+ P+ TYN +
Sbjct: 556 DRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+K TE+++ M R P+ +TY++++ G CK + ++EA + M+++G
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKAR-SMKEAQYFHNEMIEKG 674
Query: 286 I----PPYSSTVEMLRNR 299
YS+ + +L +
Sbjct: 675 FRLTASSYSALIRLLNKK 692
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 2/272 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ CKR + A Q + + P V TY+ L GL G++ A +L EM +
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++ +NSL+ +CKAG +D+A + +M + G +PD ++Y+ I A C++ ++
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M + P + TYN ++ C + +VE +LL+ M+E+ +P+ +YN+++ +
Sbjct: 560 DLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQY 619
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + + M NV P+ +TYN+++K + A M ++GF +
Sbjct: 620 CIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTA 679
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
S+YS ++ L KKK K EA K F M EG
Sbjct: 680 SSYSALIRLLNKKK-KFVEARKLFHDMRKEGF 710
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 9/325 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL LC V+ A Q FD P V TY IL+ G +GEL A KL D+M+ R
Sbjct: 268 LLKVLCGAGRVEDARQLFDEMASP--PDVVTYGILIHGYCALGELENAVKLLDDMVARGV 325
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+ + S++ +C G + +A ++ +M D Y+ + FC D+ S R
Sbjct: 326 EPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR 385
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
D M+R L + TY +I LC+ +++EA ++L EM+ R + DE +Y ++ +C
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
R ++ A ++ M + V P+ TY + L + G A E+ M +G +
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL----DIIEI 311
TY+ +++GLC K G L++A + M G+ P T L + L G L D+++
Sbjct: 506 TYNSLINGLC-KAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564
Query: 312 LADKMERSTSCTIQELANA--MRGK 334
+ D + T T L N M G+
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGR 589
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 2/282 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSEARKLFDEMLERK 74
+L C + + A ++FD + + T TY+ L+ GL GEL EA K+ EML R+
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
VD + + L++ CK G + EA + M G P+ +Y+ C+ D+ +
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M L N TYN +I LCK +++A + + +M G PD ++Y ++
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C E++ A L+ M + P TYN+++ GR + ++ E M ++ +P+
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNA 609
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+TY+ ++ C ++ + ++ M + P +T +L
Sbjct: 610 TTYNSLMKQYCIGN-NMKSTTEIYKGMCSRNVEPNENTYNIL 650
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ L LCK+ V+ A++ ++ TY+ L+ GL G
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A + +M D+ + +L++A+CK+G +D AH +L+EM G +P +Y++
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + ++L+ M N+ PN TYN ++++ C ++ ++ M R
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ HC + A M ++ +Y+ +++LL + +F A
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+++ M K GF Y+ +
Sbjct: 700 KLFHDMRKEGFTAEPDVYNFYI 721
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAH----QFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G+KP +Y L+ ALCK + AH + DN PT+ TY++L+ G G +
Sbjct: 534 GLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG---IKPTIVTYNVLMNGFCMSGRV 590
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+KL + MLE+ + +NSL++ C N+ + + M S EP+ +Y+I
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG- 179
I C+A + + M +Y+ +IR L K +K EA +L +M + G
Sbjct: 651 IKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGF 710
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMAL 204
A PD +++ ++ D E +AL
Sbjct: 711 TAEPDVYNFYIDFNFNEDNLEATLAL 736
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP--NVFTYNCIIRK 158
+LR +R G P + N + S + ++++ + +P NV +YN +++
Sbjct: 222 LLRRVRQYGISPSPEA----------CNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKV 271
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LC +VE+A QL DEM + PD +Y ++ +C E+ A++L+ M V P+
Sbjct: 272 LCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPN 328
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
Y V+ LL GR A V E M + Y+ ++ G C KG L A ++F
Sbjct: 329 ATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC-NKGDLVSARRWF 387
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ M +G+ T L N L G L E + +M
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEM 425
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P++ + +L L K+ + + D +P V TY L+ G G+ +A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LFDEM+E+K ++ + L+ +C I EA M R MR+ G P+ ++Y+ + +
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + M L+PNV T+ +I LCK +++ A + L +M G P+
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ YN ++ +C ++ AL L + + K ++PD TY++++K L V R + A + +
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+K+GF P+ TY+ ++ G C K+G +E+A + M ++GI P T L
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYC-KEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ L+ C++ A + FD + + PTV Y+IL+RGL
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +F M ++ +N++++ CK ++ +A + +EM G P+ ++ I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ +++ S + L M + +VPN+F YNC+I CK + EA L E+ +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+ ++ C + A L+ M K+ +P+ TYN ++ + G ++A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV M ++G P++ T+S ++ G C K GK+E A + MV +G+ P
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLLP 471
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 141/275 (51%), Gaps = 2/275 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y + ++ CK HVK A + + + P V T+ IL+ GL E+ A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RK +M +I +N L++ CKAGN+ EA + E+ PD F+YSI I
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + +L MK+ +PN TYN +I CK +E+A ++ +M E+G P+
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ +C ++ A+ L T M + ++PD Y ++ + G A + +
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
M++ G +P+V T S ++ GLC K G++ +A K F
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLC-KDGRISDAIKLF 531
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 9/232 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M FG+ P+I+ + L+ CK ++ A KHE P V TYSIL++GL V
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L EM ++ + + +N+L++ CK GN+++A + +M G EP+ ++S
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+A + + + M L+P+V Y +I K+ +EA++L EM E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLI-------TRMTKENVMPDRHTYNM 224
+P+ ++ + ++ C ++ A++L T +K N + DR Y M
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL-DRSLYQM 554
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 2/298 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K + P ++ ++++ GL G K++ +M+ R +++ + +L++ C+ G+
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+A + EM P Y+I I C + I + +M+ ++PN++TYN ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK V++A +L EM+ G P+ ++ ++ C E+ A + + M V+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ YN ++ + G A + +EK P V TYS+++ GLC ++EEA
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD-RMEEADG 389
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
+ M +G P + T L + G ++ IE+ + E+ I + + G
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 132 SVFRVLDSMKRYNLVPNVF------------------------------TYNCIIRKLCK 161
SVF VL ++ PNVF N ++ L K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ + +++ +M+ RGA+P+ +Y ++ C + + A RL M ++ + P
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++++ L R A ++ +M G P++ TY+ M+ G C K +++A + ++ M
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC-KIAHVKKALELYQEM 289
Query: 282 VDEGIPPYSSTVEMLRNRL 300
+ +G+ P T +L + L
Sbjct: 290 LGDGLLPNVVTFGILIDGL 308
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 12/204 (5%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
I SL+ GN+ +AH M E+ S + S++ I A+ + + ++
Sbjct: 666 IFLQTSLISMYSATGNVADAHNMFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFR 721
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M+ ++ P++ T + ++ + + RG + D N+++ +
Sbjct: 722 QMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCG 781
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM-EKRGFYPSVSTY 257
E+ A R V+P+ T+ VL G + + + SM E P +S +
Sbjct: 782 EIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHF 835
Query: 258 SVMVHGLCKKKGKLEEACKYFEMM 281
MV LC + G L EA ++ M
Sbjct: 836 GCMVDLLC-RAGLLTEAYEFILKM 858
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 102/275 (37%), Gaps = 35/275 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT-------YSILVRG 53
M E G+ P+++ L L+ LCK + A + F T KT Y +
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLA 558
Query: 54 LGDVGELSE-------ARKLFDEMLERKCPVDI----LAHNSLLEAMCKAGNIDEAHGML 102
L +SE KLF + K + N L+ ++ N +
Sbjct: 559 LSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFF 618
Query: 103 R-EMRSIGAEPDAFSYSIFIHA------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
R +R + D+FS + A E +H++ + + P +F +
Sbjct: 619 RILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHAL------VINFGFEPIIFLQTSL 672
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I V +A+ + DE+ + + S+ ++++ + D N AL+L +M ++V
Sbjct: 673 ISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDV 728
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
PD T + L +G D + + RG
Sbjct: 729 QPDIVTVTVALSACADLGALDMGEWIHAYIRHRGL 763
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 40/218 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH---------------------- 38
++ FG +P I+ L+ +V AH FD
Sbjct: 657 VINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKA 716
Query: 39 ----------EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEA 88
+ P + T ++ + D+G L + + R D+ +NSL+
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR-YNLVP 147
K G I A R P+ ++ + A A + + SMK Y+L P
Sbjct: 777 YSKCGEIGTAR------RFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 830
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + C++ LC+ + EAY+ + +M R N W
Sbjct: 831 RISHFGCMVDLLCRAGLLTEAYEFILKMPVR-PNAVVW 867
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + LL +LC+ KHV++A F + K+EF P +K+ ++++ G +G L EA
Sbjct: 219 LGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREA 278
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +++++ KC D + + ++ KAG + A + + M G PD + I A
Sbjct: 279 KRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDA 338
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C I VL M + P+V TYN +I+ LCK ++ E+ Y+LLD+M ++G P+
Sbjct: 339 LCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPN 398
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L EV ++ RM + + YN++LKL + G + +
Sbjct: 399 ARTYGYLLKSTKKPEEVPG---ILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLD 455
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
ME+ G P TY++M+HGL KG++++A YF+ M G+ P T
Sbjct: 456 EMERNGMGPDQRTYTIMIHGL-YDKGRMDDALSYFKQMTLMGMVPEPRTT 504
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 150/291 (51%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G P+++ + LL LC + A Q + + P V +Y+ ++ G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L +A + EML+R +++ ++S++ A+CKA +D+A +L M G P+ +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H +C + L M + P+V TYN ++ LCKN + EA ++ D M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +Y +L + + + L+ M + + P+ + +++++ + G+ D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V+ M ++G P TY ++ LC K G++E+A +YFE M+DE + P
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILC-KSGRVEDAMRYFEQMIDERLSP 442
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + L+ LCK A + FD+ K P + TY L++G G L E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ + + L+ A K G +D+A + +MR G PD +Y I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + R + M L P YN +I LC +K ++A +L+ EM++RG D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N+I+ HC V + +L M + V PD TY+ ++ G+ D AT++
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SM G P TY+ +++G CK ++E+A F M G+ P
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKIS-RMEDALVLFREMESSGVSP 582
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ ++ ALCK + + A + + K+ P +TY+ +V G G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA M M G +P+ +Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ +I K KV++A + +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C V A+R +M E + P YN ++ L ++D+A
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG ++ ++ C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L+ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 49 GRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168
Query: 121 IHAFCEAND----------------------------IHSVFRVLDSMKRY--------- 143
+ C+ N I+ F+ D K Y
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TY+ II LCK + +++A ++L M++ G P+ +YN+I+ +C + A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
KG L E ++MV GI P
Sbjct: 349 Y-ATKGALVEMHGLLDLMVRNGIHP 372
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M++ + + +NSL+ ++C D+A ++ EM G D ++
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TY+ +I C K++EA +LL M+ G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ + + G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 663
Query: 300 LVGLG 304
L+ +G
Sbjct: 664 LLKVG 668
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 113/210 (53%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + E+ KLFD M+ DI+ +++L++ C AG +DEA +L M S+G +PD +Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + + + M+ + P++ TYN I++ L + + A +L + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN IL C + ALR+ + ++ + T+N+++ L++VGR D
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
A +++ ++ G P V TYS+M L ++
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR DE+ C IL + + C AG +D L + G DA +++ +
Sbjct: 80 ARAGADEVTPNLCTYGIL-----IGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 123 AFC------EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C +A DI VL M + +PNVF+YN +++ LC + +EA +LL M
Sbjct: 135 GLCADKRTSDAMDI-----VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 177 ERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+ G + PD SY ++ +++ A M ++P+ TY+ ++ L +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D+A EV SM K G P+ TY+ +VHG C G+ +EA + + M +G+ P T
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC-SSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 295 MLRNRL 300
L + L
Sbjct: 309 SLMDYL 314
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP + L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK DEA M + + + + +++I
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY+ + L + +EE L M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ N+I+ R ++ A + + +++ + T ++ L LL
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N LA H A V+ R+ R + V P+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRM-ARAGADEVTPNLCTY 94
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D ++ K+GF ++ ++ GLC K
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 140
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+P + + ++ LCK K V A+ F+ N++ F P V TYS L+ G G+L A
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIF-PDVITYSTLICGFCLAGQLMGAF 327
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EM + D+ + L++A+CK G + EA +L M G +P+ +YS + +
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGY 387
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++H+ ++ +M + + P+V +YN +I LCK + V+EA LL EM+ + P+
Sbjct: 388 CLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT 447
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+++ C + AL L+ + D TY +L L + D+A ++
Sbjct: 448 VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK 507
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M++RG P+ TY+ ++ GLC K +L+ A K F+ ++ +G T ++ L G
Sbjct: 508 MKERGIQPNKYTYTALIDGLC-KGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEG 566
Query: 305 FLDIIEILADKME 317
LD + KME
Sbjct: 567 MLDEALAMKSKME 579
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L L+ LC + VK + F D + F +Y L+ GL +GE
Sbjct: 193 ILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGE 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL + +R D++ +N++++ +CK ++EA+ EM S G PD +YS
Sbjct: 253 TRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYST 312
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A + F +L+ M N+ P+V+TY +I LCK K++EA LL M + G
Sbjct: 313 LICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ ++ +C EV+ A ++ M + V P +YN+++ L + D A
Sbjct: 373 VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAM 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ M + P+ TY+ ++ GLC K G++ A + + G P
Sbjct: 433 NLLREMLHKNVVPNTVTYNSLIDGLC-KSGRITSALDLMKELHHRGQP 479
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
PSI + ++L +L K KH A + + P + T SIL+ +G+++ + +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ + + +L++ +C G + ++ ++ + G + + SY ++ C+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++L ++ + P+V YN II LCK++ V EAY EM RG PD +
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C ++ A L+ MT +N+ PD +TY +++ L + G+ A + M
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
K G P+V TYS ++ G C G++ A + F MV + P + ++ N L
Sbjct: 370 KEGVKPNVVTYSTLMDGYC-LVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL 422
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+KP++ L+ C V A Q F + E P+V +Y+I++ GL
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L EML + + + +NSL++ +CK+G I A +++E+ G D +Y+
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ ++ + MK + PN +TY +I LCK +++ A +L ++ +G
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN ++ C ++ AL + ++M +PD T+ ++++ L D+A
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAE 607
Query: 240 EVWESMEKRGF 250
++ M +G
Sbjct: 608 KLLHEMIAKGL 618
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ + PS+ + +++ LCK K V A H+ P TY+ L+ GL G
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A L E+ R P D++ + SLL+ +CK N+D+A + +M+ G +P+ ++Y+
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + ++ + +V+TYN +I LCK ++EA + +M + G
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
PD ++ I+ ++ E + A +L+ M + ++ R+
Sbjct: 583 CIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRN 623
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A F+ ML + I+ +L ++ K + A + ++M G EPD + SI I
Sbjct: 115 DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILI 174
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FC + F VL + + PN +++ LC +V+++ D+++ +G
Sbjct: 175 NCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQ 234
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
++ SY +L C E A++L+ + + PD YN ++ L + + A +
Sbjct: 235 MNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDF 294
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M RG +P V TYS ++ G C G+L A M + I P T +L + L
Sbjct: 295 YTEMNSRGIFPDVITYSTLICGFC-LAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLV------PNVFTYNCIIRKLCKNEKVEEAY 169
++ + H+ + IH V V D++ ++N + P++ + I+ L K + A
Sbjct: 97 TFPFYFHS--QPPSIHDV--VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAI 152
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L +M +G PD + + ++ C ++ + ++ ++ K P+ ++K L
Sbjct: 153 SLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGL 212
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP- 288
G ++ + + +GF + +Y +++GLC K G+ A K M+ D P
Sbjct: 213 CLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC-KIGETRCAIKLLRMIEDRSTRPD 271
Query: 289 ---YSSTVEML-RNRLV 301
Y++ ++ L +++LV
Sbjct: 272 VVMYNTIIDGLCKDKLV 288
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + LL +LC+ KHV++A F + K+EF P +K+ ++++ G +G L EA
Sbjct: 219 LGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREA 278
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +++++ KC D + + ++ KAG + A + + M G PD + I A
Sbjct: 279 KRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDA 338
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C I VL M + P+V TYN +I+ LCK ++ E+ Y+LLD+M ++G P+
Sbjct: 339 LCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPN 398
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L EV ++ RM + + YN++LKL + G + +
Sbjct: 399 ARTYGYLLKSTKKPEEVPG---ILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLD 455
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
ME+ G P TY++M+HGL KG++++A YF+ M G+ P T
Sbjct: 456 EMERNGMGPDQRTYTIMIHGL-YDKGRMDDALSYFKQMTLMGMVPEPRTT 504
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P++ + +L L K+ + + D +P V TY L+ G G+ +A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LFDEM+E+K ++ + L+ +C I EA M R MR+ G P+ ++Y+ + +
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + M L+PNV T+ +I LCK +++ A + L +M G P+
Sbjct: 274 CKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ YN ++ +C ++ AL L + + K ++PD TY++++K L V R + A + +
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+K+GF P+ TY+ ++ G C K+G +E+A + M ++GI P T L
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYC-KEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 141/275 (51%), Gaps = 2/275 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y + ++ CK HVK A + + + P V T+ IL+ GL E+ A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RK +M +I +N L++ CKAGN+ EA + E+ PD F+YSI I
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + +L MK+ +PN TYN +I CK +E+A ++ +M E+G P+
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ +C ++ A+ L T M + ++PD Y ++ + G A + +
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHK 497
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
M++ G +P+V T S ++ GLC K G++ +A K F
Sbjct: 498 EMQEAGLHPNVFTLSCLIDGLC-KDGRISDAIKLF 531
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ L+ C++ A + FD + + PTV Y+IL+RGL
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +F M ++ +N++++ CK ++ +A + EM G P+ ++ I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ +++ S + L M + +VPN+F YNC+I CK + EA L E+ +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y+ ++ C + A L+ M K+ +P+ TYN ++ + G ++A
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV M ++G P++ T+S ++ G C K GK+E A + MV +G+ P
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLLP 471
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 14/277 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M FG+ P+I+ + L+ CK ++ A KHE P V TYSIL++GL V
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L EM ++ + + +N+L++ CK GN+++A + +M G EP+ ++S
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+A + + + M L+P+V Y +I K+ +EA++L EM E G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLI-------TRMTKENVM------PDRHTYNMVL 226
+P+ ++ + ++ C ++ A++L T +K N + P+ Y ++
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L GR +A++ + M G P V T V++ G
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQG 600
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 2/298 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K + P ++ ++++ GL G K++ +M+ R +++ + +L++ C+ G+
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+A + EM P Y+I I C + I + +M+ ++PN++TYN ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK V++A +L EM+ G P+ ++ ++ C E+ A + + M V+
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ YN ++ + G A + +EK P V TYS+++ GLC ++EEA
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD-RMEEADG 389
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
+ M +G P + T L + G ++ IE+ + E+ I + + G
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 132 SVFRVLDSMKRYNLVPNVFTY------------------------------NCIIRKLCK 161
SVF VL ++ PNVF N ++ L K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ + +++ +M+ RGA+P+ +Y ++ C + + A RL M ++ + P
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++++ L R A ++ +M G P++ TY+ M+ G C K +++A + + M
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC-KIAHVKKALELYXEM 289
Query: 282 VDEGIPPYSSTVEMLRNRL 300
+ +G+ P T +L + L
Sbjct: 290 LGDGLLPNVVTFGILIDGL 308
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 87/241 (36%), Gaps = 51/241 (21%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-------------------------DN 35
M E GI+P+I L+ CK ++ A + N
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 36 AKHEFT-----------PTVKTYSILVRGLGDVGELSEARKLF-------------DEML 71
K F P V T S L+ GL G +S+A KLF +E+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
C + + + +L++ +C G I +A +MR G PD F+ + I A +
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER--GANPDEWSYNA 189
V + + + ++PN Y + + ++ ++ A E ++ N + W
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYT 668
Query: 190 I 190
I
Sbjct: 669 I 669
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 25/222 (11%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A +LF +M DI+ L A G +D + +R G + D +
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ + + +I + R+ D ++ +V T+ +I + + EEA QL EM E
Sbjct: 791 INMYSKCGEIGTARRLFDGTQK----KDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ N E +L V+P+ T+ VL G + +
Sbjct: 847 RARKNKRN---------GEXESSL----------VLPNDVTFMGVLMACSHAGLVEEGKQ 887
Query: 241 VWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ SM E P +S + MV LC + G L EA ++ M
Sbjct: 888 HFRSMKEDYSLRPRISHFGCMVDLLC-RAGLLTEAYEFILKM 928
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 151/284 (53%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
++P + + ++ LCK KH+ A F + + P V TYS L+ L + G S+A
Sbjct: 47 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 106
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK D+ ++L++A K G + EA + EM +P +YS I+ F
Sbjct: 107 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK ++VEE ++ EM +RG +
Sbjct: 167 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + +MA + M + V P+ TYN +L L + G+ ++A V+E
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 286
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 287 LQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCNLSLKGVKP 329
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 81 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 140
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R I+ ++SL+ C +DEA M M S PD +Y+ I
Sbjct: 141 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 200
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + V M + LV N TYN +I+ L + + A ++ EM+ G P+
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P V Y+ M+ G C +KG EEA F+ M ++G P S ++R RL
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 146/278 (52%), Gaps = 1/278 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + TY ++V GL G+ A L ++M + K +L +N++++ +CK ++D+A +
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+EM + G P+ +YS I C R+L M + P+VFT++ +I K
Sbjct: 74 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K+ EA +L DEM++R +P +Y++++ C ++ A ++ M ++ PD T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++K + R + EV+ M +RG + TY++++ GL + G + A + F+ M
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDCDMAQEIFKEM 252
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
V +G+PP T L + L G L+ ++ + ++RS
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
MV+ I PSI L++ C + A Q F+ +KH F P V TY+ L++G
Sbjct: 147 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 205
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ E ++F EM +R + + +N L++ + +AG+ D A + +EM S G P+ +Y+
Sbjct: 206 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 265
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + V + ++R + P ++TYN +I +CK KVE+ + L + +
Sbjct: 266 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 325
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +++ C + A L M ++ +P+ YN +++ +R G + +
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ + M GF ST ++ + L G+L+++
Sbjct: 386 AELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 419
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E I P ++ L+ A K + A + +D K P++ TYS L+ G
Sbjct: 112 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+++F+ M+ + C D++ +N+L++ CK ++E + REM G + +Y+I
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A D + M + PN+ TYN ++ LCKN K+E+A + + +
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P ++YN ++ C +V L ++ + V PD YN ++ R G + A
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 351
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M++ G P+ Y+ ++ + G E + + + M G +ST+ ++ N
Sbjct: 352 ALFKEMKEDGTLPNSGCYNTLIRARL-RDGDREASAELIKEMRSCGFAGDASTIGLVTNM 410
Query: 300 L 300
L
Sbjct: 411 L 411
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D M+ + C D++ + ++ +CK G+ D A +L +M EP Y+ I C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + + M+ + PNV TY+ +I LC + +A +LL +MIER NPD +
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+++A++ ++ A +L M K ++ P TY+ ++ R D A +++E M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ +P V TY+ ++ G CK K ++EE + F M G+ + T +L L G
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 306 LDIIE 310
D+ +
Sbjct: 242 CDMAQ 246
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ LI RM + PD TY +V+ L + G D A + ME+ P V Y+ ++ G
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
LCK K +++A F+ M +GI P T L + L G + D +L+D +ER
Sbjct: 61 LCKYK-HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGEL 60
+FG+K S+ L+ LL+ L + + + H F N+K F TP + T ++LV+ L ++
Sbjct: 148 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+ DE+ +++ + ++L G+++ A +L EM G PDA +Y++
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +C+ V+D M++ + PN TY +IR LCK +K EA + DEM+ER
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD ++ C+ +V+ A L +M K N MPD + ++ L + GR A +
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ EK G PS+ TY+ ++ G+C +KG+L EA + ++ M + P + T +L
Sbjct: 388 LFDEFEK-GSIPSLLTYNTLIAGMC-EKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 155/318 (48%), Gaps = 38/318 (11%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FGI P+I+ + L+ ALCK+ ++ A++ D P + TY+ ++ G G++
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++ +EML+R D + L++ CK G EA ++ +M EP+ +Y + I
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 123 AFCE---ANDIHSVF----------------RVLDS----------------MKRYNLVP 147
A C+ + + ++F +V+D+ M + N +P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ + +I LCK +V EA +L DE E+G+ P +YN ++A C++ E+ A RL
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + P+ TYN++++ L + G V E M + G +P+ +T+ ++ GL +K
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL-QK 482
Query: 268 KGKLEEACKYFEMMVDEG 285
GK E+A K M V G
Sbjct: 483 LGKEEDAMKIVSMAVMNG 500
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SI 108
L+R G G + ++F + + + + N+LL + + D H M + + S
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P+ F+ ++ + A C+ NDI S ++VLD + LVPN+ TY I+ +E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++L+EM++RG PD +Y ++ +C + A ++ M K + P+ TY ++++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + + A +++ M +R F P S ++ LC+ K++EAC + M+ P
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH-KVDEACGLWRKMLKNNCMP 364
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
++ + L + L G + L D+ E+ +
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEFEKGS 396
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P L+ CK A D+ K+E P TY +++R L +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EAR +FDEMLER D +++A+C+ +DEA G+ R+M PD S
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + ++ D ++ + +P++ TYN +I +C+ ++ EA +L D+M ER
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN ++ V +R++ M + P++ T+ ++ + L ++G+ + A
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 240 EV 241
++
Sbjct: 491 KI 492
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV I P ++ + L+ + A F+ K E P V T++ILV G G+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A+ + M++ D++ +NSL++ C +++A + M S G + Y+
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC+ + + + M+ ++PNV TY+ +I LCK ++ A +L+DEM +RG
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y++IL C V+ A+ L+T + + + PD +TY +++K L + GR + A
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V+E + +G+ V Y+VM+ G C KG ++A M D G P + T E++
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFC-DKGFFDKALALLSKMEDNGCIPNAKTYELV 522
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+ + L+ LC + H+ A F D + F +Y L+ GL VG ++ A
Sbjct: 126 GYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 185
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + + + + +N +++ MCKA +++A + +M + PD F+Y+ I
Sbjct: 186 LQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISG 245
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + ++ + + MK+ N+ PNV+T+N ++ CK KV +A +L M++ PD
Sbjct: 246 FSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPD 305
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ +C +VN A + M V+ + Y ++ ++ D A ++E
Sbjct: 306 VVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFE 365
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M R P+V TYS ++ GLC K G++ A K + M D G PP YSS ++ L
Sbjct: 366 EMRCRKIIPNVVTYSSLIDGLC-KLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 1/281 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K + PT T++ L++GL G + +A D+++ + +D +++ +L+ +CK G I
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A +L+ + +P+A Y++ I C+A ++ F + M + P+VFTYN +I
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
K+ A L ++M + NP+ +++N ++ C +VN A ++ M K+++
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TYN ++ + + ++A ++++SM G +V Y+ MV+G CK K ++EA
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK-MVDEAIN 362
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
FE M I P T L + L LG + L D+M
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMH 403
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 131/251 (52%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ IKP + + L+ C V A FD+ A V+ Y+ +V G +
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+EM RK +++ ++SL++ +CK G I A ++ EM G P+ +YS
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L ++K + P+++TY +I+ LC++ ++E+A + ++++ +G
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D ++Y ++ CD+ + AL L+++M +P+ TY +V+ L D A
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAE 536
Query: 240 EVWESMEKRGF 250
++ M RG
Sbjct: 537 KLLREMIVRGL 547
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 143/284 (50%), Gaps = 10/284 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVA---HQF--FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
P + +++L +L K KH A HQ + + +F T++IL+ +G S
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFF----TFNILINCFSQLGLNSL 114
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ +F ++L++ + N+L++ +C G+I +A ++ + G D SY I+
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ I + ++L + + PN YN II +CK + V +A+ L +M+ + P
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++YNA+++ +++N A+ L +M KEN+ P+ +T+N+++ + G+ + A V
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M K P V TY+ ++ G C K+ +A F+ M G+
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYC-SINKVNKAKDIFDSMASGGV 337
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 1/248 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP ++ ++ L S A L +M D N L+ + G +
Sbjct: 58 TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ ++ G P A +++ I C IH D + + +Y +I LC
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++ A QLL + + P+ YN I+ C VN A L ++M + + PD
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN ++ V + + A +++ M+K P+V T++++V G C K+GK+ +A +
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFC-KEGKVNDAKVVLAI 296
Query: 281 MVDEGIPP 288
M+ + I P
Sbjct: 297 MMKDDIKP 304
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 108 IGAEPDAFS-YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
IG P + +S H E N++ S F L + N P F +N I+ L K +
Sbjct: 21 IGLFPSSIRLFSQLHHKQDEENNLISSFNHL--LLHKNPTPPTFQFNKILSSLVKAKHHS 78
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A L +M G D +++N ++ +++ + ++ K+ P T+N ++
Sbjct: 79 TALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLI 138
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K L G +A + + +GF+ +Y +++GLC K G++ A + + + + +
Sbjct: 139 KGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC-KVGRITAALQLLKRVDGKLV 197
Query: 287 PPYSSTVEMLRNRL 300
P + M+ + +
Sbjct: 198 QPNAVMYNMIIDNM 211
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 43/330 (13%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+ + +A Q + K F ++ L++GL D G + EA +
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F M + C D++ + +L+ A+CKAG DEA GMLREM + G PD ++S I C+
Sbjct: 115 FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 127 ANDIHSVFRVLDSM--------------------KRYNLV----------------PNVF 150
FRVL+ + +YN V P V
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+N +I CK + ++ AY+LL+ MIE+G P+ +++ ++ C V A +L+ +M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
P+ TY+ V+ L + G+ D A E+++ ME+R P+V T+++++ GLCK K +
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK-R 352
Query: 271 LEEACKYFEMMVDEGIPP----YSSTVEML 296
+EEA + + M + G P Y+S ++ L
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGL 382
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 71/352 (20%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L+ LC V A + F + P V TY+ LV L G+ EA+ + EM+ + C
Sbjct: 98 LMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGC 157
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS----------------- 116
D + ++L++ +CK G+ ++A +L ++ R +G AF
Sbjct: 158 APDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELAS 217
Query: 117 -----------------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+++ I+ FC+A D+ S +++L+ M VPNVFT+ +I L
Sbjct: 218 KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 277
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK +V EA QLL++M+ G +P+ +Y+ ++ C + +V+ A L M + N P+
Sbjct: 278 CKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNV 337
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK------------ 267
T+N+++ L + R + A +++ M + G P + TY+ ++ GLCK
Sbjct: 338 VTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQT 397
Query: 268 -----------------------KGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G++ +AC+ F M+VD+G P +T L
Sbjct: 398 IPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 150/303 (49%), Gaps = 4/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC-KRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVG 58
+++ G+ S + ++ LC K V++A + FTPTV +++++ G
Sbjct: 187 VIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAK 246
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L A KL + M+E+ C ++ L+ +CKA + EA +L +M G P+ +YS
Sbjct: 247 DLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYS 306
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ + + + M+R N PNV T+N +I LCK +++EEA QL M E
Sbjct: 307 TVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET 366
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-MPDRHTYNMVLKLLVRVGRFDR 237
G PD +YN+++ C +V+ A +L + + V + TY+ + +GR
Sbjct: 367 GCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD 426
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ + +GF P ++TY+ ++ CK + E + E M +G PP +T+ +
Sbjct: 427 ACRIFSMLVDKGFSPDLATYTSLILEYCKTS-RAVEVVELVEEMASKGFPPRVNTLSAVL 485
Query: 298 NRL 300
L
Sbjct: 486 GGL 488
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 162/339 (47%), Gaps = 7/339 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P+++ L+ LCK V A Q + +P V TYS ++ GL G+
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ 317
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +LF M R CP +++ HN L++ +CKA I+EA + MR G PD +Y+
Sbjct: 318 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNL-VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C++ + F++ ++ + N TY+ + ++ +A ++ ++++
Sbjct: 378 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 437
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD +Y +++ +C + + L+ M + P +T + VL L +RA
Sbjct: 438 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 497
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE---GIPPYSSTVEM 295
++++SM RG Y+++V G+ + K ++A E ++D+ P SS V+
Sbjct: 498 IQLFDSMAARGCTDDALIYNLVVEGM-ARASKHDKALAVLEQVIDKRDRKFNPSSSAVDA 556
Query: 296 LRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
L L +G D + L KM ER + + + G
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 170/380 (44%), Gaps = 43/380 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ +++ LCK+ V A++ F + P V T++IL+ GL
Sbjct: 293 MVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 352
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYS 118
+ EAR+L+ M E C DI+ +NSL++ +CK+ +DEA + + + G + +A +YS
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 412
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK-------------- 164
H + + R+ + P++ TY +I + CK +
Sbjct: 413 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 472
Query: 165 ---------------------VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
E A QL D M RG D YN ++ ++ + A
Sbjct: 473 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKA 532
Query: 204 LRLITRMTKE---NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
L ++ ++ + P + +++ L +VG+ D A ++ M +RGF +VS+Y+ +
Sbjct: 533 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRL 592
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
+ GL + + + +EA + FE MV G P STV ++ + L +D L +M +
Sbjct: 593 LSGLSRLQ-RWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 651
Query: 321 SCTIQELANAMRGKTGFRKS 340
C E N + G G+ KS
Sbjct: 652 CCPDIETCNTLIG--GYCKS 669
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 6/324 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK--TYSILVRGLGDVG 58
M E G P I + L+ LCK V A Q F TYS L G +G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+++A ++F ++++ D+ + SL+ CK E ++ EM S G P + S
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-- 176
+ E N ++ DSM + YN ++ + + K ++A +L+++I
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542
Query: 177 -ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+R NP + +A++ C + + A +L+ +M++ +YN +L L R+ R+
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D AT+V+E+M G P +ST +V++ LC K+++A + + M G P T
Sbjct: 603 DEATQVFEAMVSAGPAPEISTVNVVISWLC-SAAKVDDAYELVQRMSKLGCCPDIETCNT 661
Query: 296 LRNRLVGLGFLDIIEILADKMERS 319
L G D+ L ++M +
Sbjct: 662 LIGGYCKSGRADLARKLLEEMTEA 685
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 36/322 (11%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
FFD A+ V + + + L + EA LF + R C + + L+
Sbjct: 10 FFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSS 69
Query: 92 AGNIDEAHGMLREMRSIGAE----------------------------------PDAFSY 117
AG++D A +L EM+S G E PD +Y
Sbjct: 70 AGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTY 129
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +HA C+A +L M P+ T++ +I LCK E+A+++L+++I+
Sbjct: 130 TALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189
Query: 178 RGANPDEWSYNAILAYHCDR-AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG + ++ I+ C++ V +A +++ + + P +N+V+ + D
Sbjct: 190 RGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 249
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ E M ++G P+V T+++++ GLCK ++ EA + E MV G P T +
Sbjct: 250 SAYKLLEVMIEKGCVPNVFTFTILITGLCKAN-RVGEAQQLLEKMVMGGCSPNVVTYSTV 308
Query: 297 RNRLVGLGFLDIIEILADKMER 318
N L G +D L MER
Sbjct: 309 INGLCKQGQVDDAYELFQLMER 330
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G P + L+ CK + + A F P V T S ++ GL +
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM---RSIGAEPDAFS 116
A +LFD M R C D L +N ++E M +A D+A +L ++ R P + +
Sbjct: 494 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSA 553
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ + C+ ++L M V +YN ++ L + ++ +EA Q+ + M+
Sbjct: 554 VDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMV 613
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ + N ++++ C A+V+ A L+ RM+K PD T N ++ + GR D
Sbjct: 614 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRAD 673
Query: 237 RATEVWESMEKRGFYPSVSTYSVM 260
A ++ E M + G P+ +T+ ++
Sbjct: 674 LARKLLEEMTEAGLEPNDTTHDLL 697
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 158/320 (49%), Gaps = 6/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + ++LLH LCK+ V+ + + + K + T++I ++GL G
Sbjct: 207 MLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGM 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A + D ++ D++ +N+L+ +CK N+ EA L ++ + G EPD F+Y+
Sbjct: 267 LSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + + ++L VP+ FTY +I LC+N++++ A L + + +G
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P YN ++ C + AL+++ M++ D TYN+V+ L ++G A
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+ +G+ P V T++ ++ G CK+ K+E + M G+ P Y+S +
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQL-KMETTIQILNKMWSHGVTPDVITYNSVLNG 505
Query: 296 LRNRLVGLGFLDIIEILADK 315
L + ++ E + +K
Sbjct: 506 LSKAVKNEDLMETFETMVEK 525
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M GI P +Y + + C+ K A + +N + Y +V G +
Sbjct: 137 MKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENY 196
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +LF++ML D+ N LL +CK G + E+ +L ++ G + F+++I
Sbjct: 197 RVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI 256
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C + +LDS+ R L P+V TYN +I LCKN V EA + L +++ G
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN ++ +C + A +++ + +PD TY ++ L + DRA
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + +G P+V Y++++ GLC ++G + +A + M + G T ++ N
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLC-QEGLILQALQMMNEMSENGCSSDIWTYNLVING 435
Query: 300 LVGLG 304
L +G
Sbjct: 436 LCKMG 440
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 140/285 (49%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + + L+ LCK +V A ++ P TY+ L+ G +G L A
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ + + D + SL+ +C+ ID A + G +P Y++ I
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ I ++++ M +++TYN +I LCK V +A L+++ I +G PD
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N ++ +C + ++ ++++ +M V PD TYN VL L + + + E +E
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFE 520
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+M ++G P+ TY+++ LC K GK+ EA + ++++GI P
Sbjct: 521 TMVEKGCVPNKITYNILTESLC-KAGKVNEALDLVDEILNKGITP 564
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 148/294 (50%), Gaps = 3/294 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + L++ LC+ + A F+ A + PTV Y++L++GL G + +A
Sbjct: 351 GFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQA 410
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM E C DI +N ++ +CK G + +A+ ++ + + G PD F+++ I
Sbjct: 411 LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDG 470
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + + ++L+ M + + P+V TYN ++ L K K E+ + + M+E+G P+
Sbjct: 471 YCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPN 530
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +YN + C +VN AL L+ + + + PD ++ ++ G A +++
Sbjct: 531 KITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFR 590
Query: 244 SM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M E+ + +TY++M++ +K L K F M G P + T ++
Sbjct: 591 RMGEQYKVSHTTATYNIMINAFAEKL-DLHMGEKLFLEMGAGGCAPDTYTYRVM 643
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 1/256 (0%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
++ G G++ EA +F+ M C +L++N+++ + ++G +AH + M+++G
Sbjct: 83 MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD ++++I I +FC HS R+L++M N Y ++ + EAY+
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYE 202
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L ++M+ G PD ++N +L C + EV + RL+ ++ K+ + + T+N+ ++ L
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
R G A + +S+ + G P V TY+ ++ GLCK + EA KY +V+ G+ P
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNS-NVVEAEKYLHKLVNGGLEPDG 321
Query: 291 STVEMLRNRLVGLGFL 306
T L + +G L
Sbjct: 322 FTYNTLIDGYCKMGML 337
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 2/252 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + L+ CK+ ++ Q + H TP V TY+ ++ GL + +
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F+ M+E+ C + + +N L E++CKAG ++EA ++ E+ + G PD S++ I
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISG 575
Query: 124 FCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
F D+ +++ M ++Y + TYN +I + + +L EM G P
Sbjct: 576 FANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAP 635
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++Y ++ C + + + M ++ +P T+ V+ L R A ++
Sbjct: 636 DTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDII 695
Query: 243 ESMEKRGFYPSV 254
M G P V
Sbjct: 696 HFMVHNGIVPEV 707
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEM-IERGANPDEWSYNAILAYHCDRAEVNMALRL 206
++ TY CII+KL + +L E ++ + E Y + + + +V A+ +
Sbjct: 39 SLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDV 98
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
RM N P +YN ++ +LV G F +A +V+ M+ G P V T+++ + C+
Sbjct: 99 FERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCR 158
Query: 267 KKGKLEEACKYFEMMVDEG 285
K + A + MV +G
Sbjct: 159 TK-RPHSALRLLNNMVSQG 176
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 11/310 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF------DNAKHEFTPTVKTYSILVRGL 54
M G P+++ LL LC + A D+ + + P V +Y+ ++ GL
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212
Query: 55 GDVG-ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
G +L A LFD+ML++ D++ +NS++ A+ KA +D+A +L M GA P+
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+++ +H +C + + V M R + P+VFTYN ++ LCKN + EA ++ D
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M++RG P+ +Y +L + + L+ M + + PD + +N+++ + G
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D A ++ M ++G P TY +++ LC GK+++A F ++ EG+ P
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALC-MVGKVDDAMAQFGRLISEGLTP---DA 448
Query: 294 EMLRNRLVGL 303
+ RN + GL
Sbjct: 449 VVFRNLIHGL 458
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P ++ + L+ LCK A + FD+ K P TY L+ G G
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGS 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + L D M+ D N L+ K G +D+A + +MR G PD +Y I
Sbjct: 359 LVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGI 418
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C + + L P+ + +I LC +K ++A +L EMI RG
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG 478
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +N +L + C V A + M + +V D TYN ++ G+ D A
Sbjct: 479 ICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAA 538
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++ E M G P+ TY+ M++G C K G++E+A F M +G+ P YS+ ++
Sbjct: 539 KLLEGMVLDGVKPNEVTYNTMINGYC-KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQG 597
Query: 296 L 296
L
Sbjct: 598 L 598
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 13/322 (4%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
SI DL++ L + R VA F A+ + P + TYS+++ VG L A
Sbjct: 53 SIVDLNRAL-SDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAF 111
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIFIHA 123
++ + + + LL+A+C EA + LR M +G P+ FSY+I +
Sbjct: 112 AALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKG 171
Query: 124 FCEANDIHSVFRVLDSM-----KRYNLVPNVFTYNCIIRKLCK-NEKVEEAYQLLDEMIE 177
C+ N +L +M R P+V +YN +I L + +++ AY L D+M++
Sbjct: 172 LCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLD 231
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G +PD +YN+I++ ++ A ++ RM K MP+R T+N +L G+ +
Sbjct: 232 QGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPND 291
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A V++ M + G P V TY+ ++ LC K G+ EA K F+ MV G P S+T L
Sbjct: 292 AIGVFKRMCRDGVEPDVFTYNTLMGYLC-KNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350
Query: 298 NRLVGLGFLDIIEILADKMERS 319
+ G L + L D M R+
Sbjct: 351 HGYATEGSLVKMHHLLDMMVRN 372
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 35/369 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI+P Y + L+ K V A F + + P TY I++ L VG+
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F ++ D + +L+ +C D+A + EM G P+ ++
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ + + D M R ++ +V TYN +I C + KV+EA +LL+ M+ G
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ +C + A L +M + V P TY+ +L+ L + R A
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E++ M K G + TY++++ GLC+
Sbjct: 609 ELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDAL 668
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
K G+ +EA F ++ G+ P T ++ L+ G L+ ++ L +E++
Sbjct: 669 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANS 728
Query: 326 ELANAMRGK 334
+ NA+ GK
Sbjct: 729 RMLNALVGK 737
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G KP+ LLH + H D ++ P ++IL+ G+
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF +M + D + + +++A+C G +D+A + S G PDA +
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + M + PN +N ++ LCK V A + D M+
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ +C +V+ A +L+ M + V P+ TYN ++ + GR + A
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++ M +G P + TYS ++ GL + + + A + + M+ GI
Sbjct: 574 SLFRQMASKGVNPGIVTYSTILQGLFQAR-RTAAAKELYLWMIKSGI 619
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P + + ++ AL K R K A K+ P T++ L+ G G+
Sbjct: 229 MLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGK 288
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +F M D+ +N+L+ +CK G EA + M G +P++ +Y
Sbjct: 289 PNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGT 348
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + +LD M R + P+ + +N +I K+ KV++A L +M +G
Sbjct: 349 LLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQG 408
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C +V+ A+ R+ E + PD + ++ L ++D+A
Sbjct: 409 LNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAE 468
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
E+ M RG P+ ++ +++ LC K+G + A F++MV
Sbjct: 469 ELAVEMIGRGICPNNIFFNTLLNHLC-KEGMVARAKNIFDLMV 510
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + +++ CK ++ A F A P + TYS +++GL
Sbjct: 544 MVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARR 603
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ M++ DI +N +L +C+ D+A + + + I + +++I
Sbjct: 604 TAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNI 663
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + S+ LVPNV TY +++ L + +EE L + + G
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNG 723
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ NA++ + EV A ++++ + N + T L LLV G++D+
Sbjct: 724 CTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAE-SLVLLVSSGKYDQ 780
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 148/298 (49%), Gaps = 7/298 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G + + L+ CK ++ A + D + +P TY ++ L D G+L +
Sbjct: 142 ESGAVIDVTSYNVLISGYCKSGEIEEALRVLD--RMGVSPNAATYDAVLCSLCDRGKLKQ 199
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ L+ KC D++ L++A CK + +A + EMR+ G +PD +Y++ I
Sbjct: 200 AMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIK 259
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC+ + R L + Y P+V ++N I+R LC + +A +LL M+ +G P
Sbjct: 260 GFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP 319
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++N ++ + C + + AL ++ M K P+ ++N +++ DRA E
Sbjct: 320 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYL 379
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
E M RG YP + TY++++ LC K GK+++A + +G P Y++ ++ L
Sbjct: 380 EIMVSRGCYPDIVTYNILLTALC-KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 436
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 169/334 (50%), Gaps = 11/334 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A CK V A + F+ +++ P V TY++L++G G L EA +
Sbjct: 214 PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRF 273
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++ C D+++HN +L ++C G +A +L M G P +++I I+ C+
Sbjct: 274 LKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQ 333
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ VL+ M ++ PN ++N +I+ C + ++ A + L+ M+ RG PD +
Sbjct: 334 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVT 393
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V+ A+ ++++++ + P +YN V+ L++VG+ + A E+ E M
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 453
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLV 301
+G P + T + +V GL ++GK+ EA K+F + I P Y+S + L +++
Sbjct: 454 YKGLKPDLITCTSVVGGL-SREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQT 512
Query: 302 GLGFLDIIEILADKMERSTSCTIQELANAMRGKT 335
L I+ LAD + + T ++G T
Sbjct: 513 SLA----IDFLADMVAKGCKPTEATYTTLIKGIT 542
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 4/256 (1%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P V + L+R +G A ++ + E +D+ ++N L+ CK+G I+EA
Sbjct: 111 SPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA-- 168
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
LR + +G P+A +Y + + C+ + +VL + P+V T +I C
Sbjct: 169 -LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATC 227
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K V +A +L +EM +G PD +YN ++ C ++ A+R + ++ PD
Sbjct: 228 KESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVI 287
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
++NM+L+ L GR+ A ++ +M ++G PSV T++++++ LC +KG L +A EM
Sbjct: 288 SHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLC-QKGLLGKALNVLEM 346
Query: 281 MVDEGIPPYSSTVEML 296
M G P S + L
Sbjct: 347 MPKHGHTPNSRSFNPL 362
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL E + + M + D++A +L+ CK G A ++ + GA D SY
Sbjct: 93 GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I +C++ +I RVLD R + PN TY+ ++ LC K+++A Q+L ++
Sbjct: 153 NVLISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
PD + ++ C + V A++L M + PD TYN+++K + GR D
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + + G P V ++++++ LC G+ +A K M+ +G P T +L
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLC-SGGRWMDAMKLLATMLRKGCLPSVVTFNILI 328
Query: 298 NRLVGLGFL 306
N L G L
Sbjct: 329 NFLCQKGLL 337
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 122/235 (51%), Gaps = 5/235 (2%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
L + + G ++E L M + G PD + + I FC+ + +++ ++
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
V +V +YN +I CK+ ++EEA ++LD M G +P+ +Y+A+L CDR ++ A++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ R + PD T +++ + +A +++ M +G P V TY+V++ G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEM-LRNRLVGLGFLDIIEILADKMERS 319
K G+L+EA ++ + + G P + M LR+ G ++D +++LA + +
Sbjct: 263 -KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + KH TP ++++ L++G +
Sbjct: 312 MLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N LL A+CK G +D+A +L ++ S G P SY+
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +L+ M L P++ T ++ L + KV EA + +
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + YN+I+ C + ++A+ + M + P TY ++K + G + A+
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDAS 551
Query: 240 EVWESMEKRGF 250
++ + RG
Sbjct: 552 KLSNELYSRGL 562
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 159/305 (52%), Gaps = 6/305 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G++P +Y + ++ +CKR V A +F N TP++ Y++L++GL + G
Sbjct: 242 MMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNT--TPSLNLYNLLLKGLLNEGRW 299
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+L +M+ + C +I+ ++ L+ ++C+ G EA +LR M+ G PDA+ Y
Sbjct: 300 EAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPL 359
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I AFC+ + +D M +P++ YN I+ LCK + +EA + ++ E G
Sbjct: 360 ISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGC 419
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ SYN + + AL +I M V PDR TYN ++ L R G D A
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIG 479
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ ME+ + P+V +Y++++ GLCK ++ +A + +MVD G P +T +L +
Sbjct: 480 LLVDMERTEWQPTVISYNIVLLGLCKAH-RIVDAIEVLAVMVDNGCQPNETTYTLL---V 535
Query: 301 VGLGF 305
G+G+
Sbjct: 536 EGVGY 540
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 17 LHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L+ LCK A F + K + P V + L++GL +A ++ E+LE+
Sbjct: 84 LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM-EILEQYG 142
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D A+N+++ C++ D A+ ++ M+ G PD +Y+I I + C + +
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V+D + N P V TY +I + +++A +LLDEM+ RG PD ++YN I+ C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
R V+ A ++ + N P + YN++LK L+ GR++ + M +G P++
Sbjct: 263 KRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
TYSV++ LC + GK EA +M ++G+ P + + L + G +D+ D
Sbjct: 320 TYSVLISSLC-RDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDD 378
Query: 316 M 316
M
Sbjct: 379 M 379
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 147/336 (43%), Gaps = 33/336 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G KP + +L+ L K + A + + + P Y+ ++ G
Sbjct: 103 MVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDPDSFAYNAVISGFCRSDRF 162
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ M R D++ +N L+ ++C G +D A ++ ++ P +Y+I
Sbjct: 163 DAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTIL 222
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ---------- 170
I A I R+LD M L P+++TYN I+R +CK V+ A++
Sbjct: 223 IEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPS 282
Query: 171 ----------------------LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
L+ +MI +G P+ +Y+ +++ C + A+ ++
Sbjct: 283 LNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLR 342
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M ++ + PD + Y+ ++ + G+ D A + M G+ P + Y+ ++ LC KK
Sbjct: 343 VMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLC-KK 401
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G+ +EA F+ + + G PP +S+ + L G
Sbjct: 402 GRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSG 437
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
H L +CK G EA L +M G +PD + I + RV++ ++
Sbjct: 80 HMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILE 139
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+Y P+ F YN +I C++++ + A +++ M RG +PD +YN ++ C R +++
Sbjct: 140 QYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLD 198
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+AL+++ ++ ++N P TY ++++ + G D A + + M RG P + TY+V+V
Sbjct: 199 LALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIV 258
Query: 262 HGLCKK 267
G+CK+
Sbjct: 259 RGMCKR 264
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 150/291 (51%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G P+++ + LL LC + A Q + + P V +Y+ ++ G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L +A + EML+R +++ ++S++ A+CKA +D+A +L M G P+ +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H +C + L M + P+V TYN ++ LCKN + EA ++ D M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +Y +L + + + L+ M + + P+ + +++++ + G+ D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V+ M ++G P TY ++ LC K G++E+A +YFE M+DE + P
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILC-KSGRVEDAMRYFEQMIDERLSP 442
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + L+ LCK A + FD+ K P + TY L++G G L E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+ + + L+ A K G +D+A + +MR G PD +Y I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + R + M L P YN +I LC +K ++A +L+ EM++RG D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+N+I+ HC V + +L M + V PD TY+ ++ G+ D AT++
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
SM G P TY+ +++G CK ++E+A F M G+ P
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKIS-RMEDALVLFREMESSGVSP 582
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ ++ ALCK + + A + + K+ P +TY+ +V G G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA M M G +P+ +Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ +I K KV++A + +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C V A+R +M E + P YN ++ L ++D+A
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
E+ M RG ++ ++ C K+G++ E+ K F++MV G+ P YS+ ++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHC-KEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + F++M++ + + +NSL+ ++C D+A ++ EM G D ++
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ D M R + P++ TY+ +I C K++EA +LL M+ G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ + + G +STY++++HGLCK +EA + F+ + + + T ++
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNN-LTDEALRMFQNLCLTDLQLETRTFNIMIGA 663
Query: 300 LVGLG 304
L+ +G
Sbjct: 664 LLKVG 668
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 146/325 (44%), Gaps = 42/325 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L+ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 49 GRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLD 108
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A +L+ +C +A + LR M +G P+ FSY+I
Sbjct: 109 LGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168
Query: 121 IHAFCEAND----------------------------IHSVFRVLDSMKRY--------- 143
+ C+ N I+ F+ D K Y
Sbjct: 169 LKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TY+ II LCK + +++A ++L M++ G P+ +YN+I+ +C + A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
KG L E ++MV GI P
Sbjct: 349 Y-ATKGALVEMHGLLDLMVRNGIHP 372
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 113/210 (53%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + E+ KLFD M+ DI+ +++L++ C AG +DEA +L M S+G +PD +Y
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I+ +C+ + + + M+ + P++ TYN I++ L + + A +L + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN IL C + ALR+ + ++ + T+N+++ L++VGR D
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
A +++ ++ G P V TYS+M L ++
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 19/246 (7%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR DE+ C IL + + C AG +D L + G DA +++ +
Sbjct: 80 ARAGADEVTPNLCTYGIL-----MGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLK 134
Query: 123 AFC------EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C +A DI VL M + +PNVF+YN +++ LC + + +EA +LL M
Sbjct: 135 GLCADKRTSDAMDI-----VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMP 189
Query: 177 ERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+ G + PD SY ++ +++ A M ++P+ TY+ ++ L +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D+A EV SM K G P+ TY+ +VHG C G+ +EA + + M +G+ P T
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC-SSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 295 MLRNRL 300
L + L
Sbjct: 309 SLMDYL 314
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP + L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK DEA M + + + + +++I
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY+ + L + +EE L M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ N+I+ R ++ A + + +++ + T ++ L LL
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N LA H A V+ R+ R + V P+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRM-ARAGADEVTPNLCTY 94
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D ++ K+GF ++ M+ GLC K
Sbjct: 95 GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADK 140
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 155/303 (51%), Gaps = 8/303 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH---QFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + G P+++ + LL LC + A Q + + P V +Y+ ++ G
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+L +A + EML+R +++ ++S++ A+CKA +D+A +L M G P+ +Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +H +C + L M + P+V TYN ++ LCKN + EA ++ D M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P+ +Y +L + + + L+ M + + P+ + +++++ + G+ D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
A V+ M ++G P TY ++ LC K G++E+A +YFE M+DE + P Y+S +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILC-KSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 294 EML 296
L
Sbjct: 452 HSL 454
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 156/355 (43%), Gaps = 42/355 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L+ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 49 GRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLD 108
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 109 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNIL 168
Query: 121 IHAFCEAND----------------------------IHSVFRVLDSMKRY--------- 143
+ C+ N I+ F+ D K Y
Sbjct: 169 LKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TY+ II LCK + +++A ++L M++ G P+ +YN+I+ +C + A
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEA 288
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + +M + V PD TYN ++ L + GR A ++++SM KRG P ++TY ++ G
Sbjct: 289 IGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG 348
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
KG L E ++MV GI P +L G +D ++ KM +
Sbjct: 349 Y-ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ ++ ALCK + + A + + K+ P +TY+ +V G G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA M M G +P+ +Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ +I K KV++A + +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y ++ C V A+R +M E + P YN ++ L ++D+A
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 240 EVW 242
+ +
Sbjct: 465 DYF 467
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N LA H A V+ R+ R + V P+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRM-ARAGADEVTPNLCTY 94
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D ++ K+GF ++ ++ GLC K
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 140
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G P I +L +CK H++VAH+ D + P V Y+ +++GL
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM + CP+D + N L++ C+ G + +L +M G PD +Y+
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC E+ +A L+ +MIE+G
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ D A
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M +G P+ YS + L K+G++ + F+ + D I
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASAL-SKEGRINRVIQMFDNIQDVTI 571
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ + L+ LC+ + HQ H TP ++ Y+ ++ G+ G
Sbjct: 251 MVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ D M +++ +N++L+ +C A ++A +L EM D +++I
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ ++ V +L+ M + VP+V TY +I CK ++EA LL M G
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY +L C A L+++M ++ P+ T+N V+ L + G ++A
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E+ + M G P + +YS ++ GL K GK +EA + +MV++G+ P YSS
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGL-GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549
Query: 296 L 296
L
Sbjct: 550 L 550
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 153/321 (47%), Gaps = 5/321 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELS 61
G + + + +L+A+C + V A + + F P V +Y+ +++GL
Sbjct: 183 GCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWG 242
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ L +EM+ CP +++ N+L+ +C+ G + H +L +M G PD Y+ +
Sbjct: 243 RVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVL 302
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + +LD M Y L PNV YN +++ LC E+ E+A +LL EM +
Sbjct: 303 DGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCP 362
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
D+ ++N ++ + C V + L+ +M + +PD TY V+ + G D A +
Sbjct: 363 LDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVML 422
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+SM G P+ +Y++++ GLC + + +A M+++G P T + N L
Sbjct: 423 LKSMAACGCRPNTISYTIVLKGLCSAE-RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLC 481
Query: 302 GLGFLD-IIEILADKMERSTS 321
G ++ IE+L + S
Sbjct: 482 KKGLVEQAIELLKQMLLNGCS 502
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 157/384 (40%), Gaps = 79/384 (20%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
+ ++ C+ + A + A P TY +VR L G +++A + DEM R
Sbjct: 87 NAMVSGYCRAGQLASARRL--AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRR 144
Query: 74 KC-PVDILAH-------------------------------------NSLLEAMC-KAGN 94
C P+ + H N +L A+C + G+
Sbjct: 145 GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGS 204
Query: 95 IDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
+DEA +LR++ S G +PD SY+ + C A V +++ M R PNV T+N
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFN 264
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+N E +Q+L +M++ G PD Y +L C + +A ++ RM
Sbjct: 265 TLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSY 324
Query: 214 NVMPDRHTYNMVLKLLVRVGRFD-----------------------------------RA 238
+ P+ YN VLK L R++ R
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRV 384
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLR 297
E+ E M + G P V TY+ +++G C K+G ++EA + M G P + S +L+
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFC-KEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443
Query: 298 NRLVGLGFLDIIEILADKMERSTS 321
++D ++++ +E+ S
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCS 467
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P + +++ CK + A + A P +Y+I+++GL
Sbjct: 391 MLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER 450
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L +M+E+ C + + N+++ +CK G +++A +L++M G PD SYS
Sbjct: 451 WVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L K ++ Q+ D + +
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R + A+ + M MP+ TY ++++ L G A
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630
Query: 240 EVWESMEKRG 249
E+ + +G
Sbjct: 631 EMLTELCSKG 640
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 9/281 (3%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L L+ +LC A + A V Y+ +V G G+L+ AR+L +
Sbjct: 52 LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASV-- 109
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE---AND 129
P + + ++ A+C G I +A +L EMR G P Y + + A C
Sbjct: 110 -PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC-KNEKVEEAYQLLDEM-IERGANPDEWSY 187
S RVL + +V N ++ +C + V+EA +LL ++ G +PD SY
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
NA+L C L+ M + P+ T+N ++ L R G F+R +V M
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G P + Y+ ++ G+C K+G LE A + + M G+ P
Sbjct: 289 HGCTPDIRMYATVLDGVC-KEGHLEVAHEILDRMPSYGLKP 328
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G +P+ +L LC + A + +P T++ ++ L G
Sbjct: 426 MAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL 485
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L +ML C D+++++++++ + KAG DEA +L M + G P+ YS
Sbjct: 486 VEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
A + I+ V ++ D+++ + + YN +I LCK + A + L M+ G
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSG 605
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+E +Y ++ V A ++T + + +
Sbjct: 606 CMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 44/240 (18%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ + +C A + S R+ S+ + PN +TY ++R LC ++ +A +LDEM
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 177 ERGANPDEWSYNAILAYHCDR--------------------------------------- 197
RG P Y+ IL C R
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 198 AEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
V+ ALRL+ + T PD +YN VLK L R+ R ++ E M + G P+V T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++ ++ LC + G E + MVD G P + + + G L++ + D+M
Sbjct: 263 FNTLIGYLC-RNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 154/303 (50%), Gaps = 5/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD-VGE 59
+ FG +P + LL ALC+ K+V+ A +++ EF K+++I++ G + V
Sbjct: 194 LPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLNGWCNMVCS 253
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++ + M R D+ ++ S++ KAG++D + M+ G PD Y+
Sbjct: 254 VREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIVPDRKVYNA 313
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A + + ++ SM+ P+ TYN +I LCK +V+EA Q+ DEMI RG
Sbjct: 314 VVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFDEMIGRG 373
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+++A+ +EV ++ +M + P+ TY M+++ R + D
Sbjct: 374 LLASVRTFHALFDVATSPSEV---FDVLDKMKTLHCEPEIDTYIMLIRKFCRWRQHDSVE 430
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++W +M G P S Y V++HGL GKLEEA KY+E M +G PP T M++
Sbjct: 431 KLWSAMPTNGLNPDRSAYIVLIHGLF-LNGKLEEAAKYYEEMKAKGFPPEQKTESMIQAW 489
Query: 300 LVG 302
L G
Sbjct: 490 LTG 492
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 39/242 (16%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A +S+L + K D+A +L EMR A P A + + +C A D+ +
Sbjct: 136 ACHSMLAILAKHRRFDDARALLDEMRRKSLASPRAVL--LLVRRYCAARDVTRAIAAFHA 193
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL--------------------------- 172
+ + P V ++ ++ LC+ + V++A LL
Sbjct: 194 LPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLNGWCNMVCS 253
Query: 173 --------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
M RG D SY ++++ ++ L+L M + ++PDR YN
Sbjct: 254 VREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIVPDRKVYNA 313
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
V+ L + D A + SME+RG P +TY+ ++ LCK + +++EA + F+ M+
Sbjct: 314 VVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKAR-QVQEATQMFDEMIGR 372
Query: 285 GI 286
G+
Sbjct: 373 GL 374
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + +L+ LCK K+ + + + TP TY+ L+ + + EA
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++FDEM R D+++ +SL+ + + G++ +A REM G PD Y+I I
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ D M +V TYN + LCK + +A L +EM+ERG PD
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ +C ++ AL L M + N+ PD+ TYN ++ + G RA E+W+
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M ++ P +Y +++G C G L EA + M+++GI P T L
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFC-SSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 156/330 (47%), Gaps = 37/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ L + H+ A F + + P Y+IL+ G G LS+A
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKA------------------------------- 92
K+ DEML R C +D++ +N+ L +CK
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Query: 93 ----GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
GN+D+A + M +PD +Y+ I FC+A ++ + D M R +++P+
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+Y ++ C + + EA L D+M+E+G P+ + N ++ +C ++ A ++
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M ++PD +YN ++ ++ ++A + MEKRG ++ TY+++++G C +
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE- 690
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
GK++EA + M++ GI P +T L N
Sbjct: 691 GKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G + + L+ LCK+K A F+ + P T++ L+RG G
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+ M+ D + +N+L++ CKAG + A + +M PD SY
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + + D M + PN+ T N +I+ C++ + +AY+ L +MI G
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +SYN ++ + A + A LI M K + + TYN++L G+ A
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+V M + G P +TYS +++G + ++EA ++ + M+ G+ P
Sbjct: 698 QVLRKMIEIGINPDGATYSSLINGHVSQD-NMKEAFRFHDEMLQRGLVP 745
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P+ + LL +C+R ++ A + FD ++ P + ++S L+ L G
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F EM D + + L++ C+ G + +A M EM + G D +Y+
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F++ C+ + + M +VP+ +T+ +IR CK+ +++A L + M+
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +YN ++ C E+ A L M +++++PD +Y VL G A
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M ++G P++ T + ++ G C + G + +A +Y M+ GI P S + L +
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYC-RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 300 LVGLGFLDIIEILADKMER 318
+ L+ IL ++ME+
Sbjct: 652 YLKEANLEKAFILINEMEK 670
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 3/295 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ SI ++LL L + V +A + + + V T +I+V L +
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+M + DI+ +N+L+ A C+ G ++EA +L S G EP +Y+ ++
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ VL M + L PN TYN ++ ++C+ + + EA ++ DEM RG PD
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
S+++++ + AL M + ++PD Y +++ R G A ++ +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLR 297
M RG + V TY+ ++GLCKKK +A F MV+ G +P + + ++R
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKK-MFADADMLFNEMVERGMVPDFYTFTTLIR 510
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+V GI+ ++Y L+ +++ALCK RK V D + TY+ L+ G
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L + R +L +N++L +CK G D A +L EM +G P+A +Y+
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C ++I + D M R ++P++ +++ +I L +N + +A EM G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C ++ AL++ M D TYN L L + F A
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +RG P T++ ++ G C K G +++A FE MV + P T L +
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYC-KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 300 LVGLGFLDIIEILADKMER 318
G + + L D M R
Sbjct: 547 FCKAGEMGRAKELWDDMIR 565
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 118/219 (53%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV +KP + L+ CK + A + +D+ + + P +Y ++ G G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L D+MLE+ +++ N+L++ C++G++ +A+ L +M S G PD+FSY+
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ F +++ M++ L N+ TYN I+ C K++EA Q+L +MIE G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
NPD +Y++++ H + + A R M + ++PD
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y +LVR +L E + F + + V I A N LL + + G +D A + E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G E + ++ +I ++A C+ +V L M+ + ++ TYN +I C+ VE
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA+QLL+ RG P +YNAIL C + + A ++ M + + P+ TYN +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ R A E+++ M +RG P + ++S ++ G+ + G L +A +F M GI
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI-GVLARNGHLYQALMHFREMERSGI 428
Query: 287 PP 288
P
Sbjct: 429 VP 430
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++Y ++ LCK V + + K P Y+ L+ G +G A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLF EM R+ D +A ++L+ + +G + EA + EM G EPD +Y+ I
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ F + + M + L PNV TY + LCK+ +++ A +LL EM +G +
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN I+ C + A++L+ M + + PD TY ++ + G +A E+
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M RG P+V T++V+++GLC GKLE+ + + M+++GI P ++T
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLC-MSGKLEDGERLLKWMLEKGIMPNAAT 462
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M++ G +P L+ CK +K A F N + TP V TY+ L GL G
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAF-FLHNQMVQIGLTPNVVTYTALADGLCKSG 334
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
EL A +L EM + ++I +N+++ +CKAGNI +A ++ EM+ G PD +Y+
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYT 394
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ A+ + ++ +L M L P V T+N ++ LC + K+E+ +LL M+E+
Sbjct: 395 TLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEK 454
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +YN+I+ +C R + ++ + M + V+PD +TYN+++K + A
Sbjct: 455 GIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA 514
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + M ++ F + S+Y+ ++ G K+K KL EA + FE M EG+
Sbjct: 515 WFLHKEMVEKRFNLTASSYNALIKGFFKRK-KLLEARQLFEEMRREGL 561
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 169/335 (50%), Gaps = 7/335 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGE 59
+ G+ + + L+++L + ++ AH + EF P V +Y+ ++ G VGE
Sbjct: 103 QLGVCWNTESYNILMNSLFRLGKIREAHHLL--MRMEFKGCIPDVVSYTTIIDGYCHVGE 160
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + +L EM + ++ ++S++ +CK+G + E +LREM G PD Y+
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + + +++ M+ +VP+ ++ +I L + KV EA +L +EMI++G
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +Y A++ +C E+ A L +M + + P+ TY + L + G D A
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M ++G ++STY+ +V+GLC K G + +A K E M + G+ P + T L +
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLC-KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399
Query: 300 LVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
G + E+L + ++R T+ M G
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNG 434
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P L+ CK + + A++ F + E P +S L+ GL G+
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF+EM+++ D + + +L++ CK G + +A + +M IG P+ +Y+
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C++ ++ + +L M R L N+ TYN I+ LCK + +A +L++EM E G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ + E+ A L+ M + P T+N+++ L G+ +
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + M ++G P+ +TY+ ++ C + + + + + M +G+ P S+T +L
Sbjct: 446 RLLKWMLEKGIMPNAATYNSIMKQYCIRN-NMRISTEIYRGMCAQGVVPDSNTYNIL 501
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 5/318 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE-L 60
++G P ++D+ L + + A +FFD + + + ++ + L + L
Sbjct: 34 DWGSDPHVFDV--FFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDML 91
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
K+F E + + ++N L+ ++ + G I EAH +L M G PD SY+
Sbjct: 92 GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTI 151
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +C ++ V +++ M+ L PN++TY+ II LCK+ KV E ++L EM++RG
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV 211
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD Y ++ C A +L + M ++PD ++ ++ L G+ A +
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADK 271
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M K+GF P TY+ ++ G C K G++++A MV G+ P T L + L
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYC-KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330
Query: 301 VGLGFLDIIEILADKMER 318
G LD L +M R
Sbjct: 331 CKSGELDTANELLHEMCR 348
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ L LCK + A++ + + + TY+ +V GL G
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN 370
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A KL +EM E D + + +L++A K G + +A +LREM G +P ++++
Sbjct: 371 ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNV 430
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C + + R+L M ++PN TYN I+++ C + + ++ M +G
Sbjct: 431 LMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQG 490
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ HC + A L M ++ +YN ++K + + A
Sbjct: 491 VVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEAR 550
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+++E M + G S Y++ V
Sbjct: 551 QLFEEMRREGLVASAEIYNLFV 572
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G++ +I + +++ LCK ++ A + + K P TY+ L+ GE
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR+L EML+R ++ N L+ +C +G +++ +L+ M G P+A +Y+
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N++ + M +VP+ TYN +I+ CK ++EA+ L EM+E+
Sbjct: 466 IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N SYNA++ R ++ A +L M +E ++ YN+ + + G +
Sbjct: 526 FNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTL 585
Query: 240 EVW-ESMEK 247
E+ E++EK
Sbjct: 586 ELCDEAIEK 594
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 151/293 (51%), Gaps = 18/293 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GIKP + + L+ ALCK ++ A + + + P KT++ L++G + G
Sbjct: 184 MVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGN 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA------------HGM----LR 103
+ A ++ ++ML+ CPV + N L+ CK G I+EA H M
Sbjct: 244 MDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYN 303
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
EM++ G +PD F+Y++ I + C + +L M+ NV TYN +I CKN+
Sbjct: 304 EMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNK 363
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
K+EEA ++ D+M +G + + +YN ++ C V A +L+ +M E + PD+ TYN
Sbjct: 364 KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+L R G +A ++ ++M G P + TY ++ GLC K G++E A +
Sbjct: 424 SMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLC-KAGRVEVASR 475
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ L+ L D +L + M+ + D+ N L++A+CKA I A ++ EM
Sbjct: 161 YNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMS 220
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
S G PD +++ + F E ++ FRV + M T N ++ CK ++E
Sbjct: 221 SYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIE 280
Query: 167 EAYQLLDEM---------IE-------RGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
EA +DEM IE +G PDE++YN ++ C R ++ AL L+ M
Sbjct: 281 EALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ TYN ++ + + + A E+++ ME +G + TY+ ++ GLCK + +
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSR-R 399
Query: 271 LEEACKYFEMMVDEGIPP 288
++EA + + M+ EG+ P
Sbjct: 400 VQEAAQLMDQMIMEGLKP 417
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+ +L + K G+ + +L+EM+ + + D IFI ++ + + +++ M+
Sbjct: 90 YEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVME 149
Query: 142 -RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ L + YN ++ L K++ + M+ +G PD ++N ++ C ++
Sbjct: 150 VEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQI 209
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+ ++ M+ ++PD T+ +++ + G D A V E M G + T +V+
Sbjct: 210 RPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVL 269
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEG 285
VHG C K+G++EEA + + M +EG
Sbjct: 270 VHGFC-KEGRIEEALSFIDEMSNEG 293
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +P+++ + ++ +CK V+ A F+ K P TY+ ++ G G VG
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + F+EM + C D++ +N+L+ CK G + REM+ G +P+ SYS
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ + + M+R LVPN +TY +I CK + +A++L +EM++ G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A++ CD + A L +M V+P+ +YN ++ V+ DRA
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ ++ RG P + Y + GLC + K+E A
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLE-KIEAA 526
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 17/328 (5%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L ++ A Q F K P ++ + L+ +G+ + ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N +++ MCK G+++ A G+ EM+ G PD +Y+ I F +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK P+V TYN +I CK K+ + EM G P+ S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + A++ M + ++P+ +TY ++ ++G A + M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G +V TY+ ++ GLC + +++EA + F M G+ P ++ L + GF
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAE-RMKEAEELFGKMDTAGVIPNLASYNALIH-----GF- 482
Query: 307 DIIEILADKMERSTSCTIQELANAMRGK 334
+ A M+R+ EL N ++G+
Sbjct: 483 ----VKAKNMDRAL-----ELLNELKGR 501
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
+P + + L++ CK + + +F+ K + P V +YS LV G + +A K
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ +M + + SL++A CK GN+ +A + EM +G E + +Y+ I C
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A + + M ++PN+ +YN +I K + ++ A +LL+E+ RG PD
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
Y + C ++ A ++ M + + + Y ++ + G + + M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++ +V T+ V++ GLCK K + +A YF
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNK-LVSKAVDYF 600
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + L+H K K++ A + + K P + Y + GL + ++ A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + +EM E + L + +L++A K+GN E +L EM+ + E ++ + I
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 124 FCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + + + L N + +I LCK+ +VE A L ++M+++G P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y +++ + + V AL L +M + + D Y ++ L + +A
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Query: 243 ESMEKRGFYP 252
E M G +P
Sbjct: 707 EEMIGEGIHP 716
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M E I+ ++ L+ LCK K V A +F+ ++F ++ ++ GL
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A LF++M+++ D A+ SL++ K GN+ EA + +M IG + D +Y+
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ N ++++A L+EMI
Sbjct: 688 SLVWGLSHCN-----------------------------------QLQKARSFLEEMIGE 712
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
G +PDE ++L H + ++ A+ L + + K ++
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
VF VL S R VP ++ + L +EEA Q +M P S N +L
Sbjct: 177 VFDVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ + R M P TYN+++ + + G + A ++E M+ RG P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
TY+ M+ G K G+L++ +FE M D P T L N G L I
Sbjct: 296 DTVTYNSMIDGF-GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 161/351 (45%), Gaps = 35/351 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+V G P + ++ LCK + A + + K TP+V TY+ L+ GL G
Sbjct: 176 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 235
Query: 60 LSEARKLFDEMLERKCPVDILAH--------------------------------NSLLE 87
+ EA +F EM+ + C D LA+ N+L++
Sbjct: 236 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMD 295
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
CK G +DE + +M G P+ +Y+I + C+ + F L+SM VP
Sbjct: 296 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 355
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+V +YN II L K K +EA Q+LD+MI+ G PD +YN ++A C + A+ ++
Sbjct: 356 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 415
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV-STYSVMVHGLCK 266
M K V PD TYN ++ L + R A E+ M + G S +TY+ ++ LC
Sbjct: 416 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC- 474
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
K+G L++A + M G+ + T + +RL G LD L +M+
Sbjct: 475 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 134/248 (54%), Gaps = 1/248 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+ + P V TY+IL+ GL + +A ++ EM++R D + NS+++ +CKAG +
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
AH +L M P +Y+ I C+ ++ ++D VP+V TY+ +
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK +++EA++L+ EM G P+ +YN ++ C ++ A L+ + +
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TY +++ L + GR D+A ++ E M KRG PSV TY+ ++ GLC + G+++EA
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC-RTGRVDEAHH 241
Query: 277 YFEMMVDE 284
F+ MV +
Sbjct: 242 IFKEMVSK 249
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 146/339 (43%), Gaps = 32/339 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E + P ++ + L+ LCK K K + + TP T++ ++ GL G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L M ER C +N+L+ +CK N+D A ++ E S G PD +YSI
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ I F ++ M PN+ TYN +I LCK K E+AY+LL+ ++ G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y I+ C ++ AL+++ M K P TY +++ L R GR D A
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK-------------------------------KK 268
+++ M + Y +V+G CK K+
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
G+L+E FE M G P T ++ + L G +D
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 7/315 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+I + ++ LCK V A F ++ P V +Y+I++ GL + EA
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R++ D+M++ P D + +N+L+ CK D+A G+L+ M G +PD +Y+ I
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436
Query: 124 FCEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ N + + ++ M R +V TYN II +LCK +++A L+D M G
Sbjct: 437 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN + C ++ A L++ M + + D +Y V+ L + + DRA+++
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLA 553
Query: 243 ESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M +G + T+++++ K K +L+EA E+MV G P T M+ L
Sbjct: 554 REMVAVKGLCITSHTFNLLIDAFTKTK-RLDEALTLLELMVQRGCSPSVITYNMVITCLC 612
Query: 302 GLGFLDIIEILADKM 316
L +D L D+M
Sbjct: 613 KLDKVDKAWELFDEM 627
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ ++ LCK +K A D+ H TY+I + L G L EA L EM
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 526
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYSIFIHAFCEANDIH 131
+ D +++ +++ +CKA +D A + REM ++ G + ++++ I AF + +
Sbjct: 527 LR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 583
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+L+ M + P+V TYN +I LCK +KV++A++L DEM RG SY ++
Sbjct: 584 EALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
C + AL+++ M + D + L GR + A E+ M +
Sbjct: 644 YGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 151/284 (53%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
++P + + ++ LCK KH+ A F + + P V TYS L+ L + G S+A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK D+ ++L++A K G + EA + EM +P +YS I+ F
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK ++VEE ++ EM +RG +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + +MA + M + V P+ TYN +L L + G+ ++A V+E
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCNLSLKGVKP 534
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 157/316 (49%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + L+H L A D P + TY ++V GL G+ A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L ++M + K +L +N++++ +CK ++D+A + +EM + G P+ +YS I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C R+L M + P+VFT++ +I K K+ EA +L DEM++R +P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C ++ A ++ M ++ PD TYN ++K + R + EV+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG + TY++++ GL + G + A + F+ MV +G+PP T L + L
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQA-GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 304 GFLDIIEILADKMERS 319
G L+ ++ + ++RS
Sbjct: 480 GKLEKAMVVFEYLQRS 495
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P+I L LL+ C K + A D + P T++ L+ GL +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ + C D++ + ++ +CK G+ D A +L +M EP Y+
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M+ + PNV TY+ +I LC + +A +LL +MIER
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD ++++A++ ++ A +L M K ++ P TY+ ++ R D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + +P V TY+ ++ G CK K ++EE + F M G+ + T +L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 300 LVGLGFLDIIEILADKM 316
L G D+ + + +M
Sbjct: 441 LFQAGDCDMAQEIFKEM 457
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R I+ ++SL+ C +DEA M M S PD +Y+ I
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + V M + LV N TYN +I+ L + + A ++ EM+ G P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P V Y+ M+ G C +KG EEA F+ M ++G P S ++R RL
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
MV+ I PSI L++ C + A Q F+ +KH F P V TY+ L++G
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 410
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ E ++F EM +R + + +N L++ + +AG+ D A + +EM S G P+ +Y+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + V + ++R + P ++TYN +I +CK KVE+ + L + +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +++ C + A L M ++ +P+ YN +++ +R G + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ + M GF ST ++ + L G+L+++
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 624
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ +S L+ + + + L ++M P + ++ L+ C+ + A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP+ + S ++ +C + I ++D M PN T+N +I L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M+ +G PD +Y ++ C R + ++A L+ +M + + P
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLLSDM 317
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS +I ++ + G
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF EM++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + + VL M + PN+ T + ++ C ++++ EA L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ ++N ++ + + A+ LI RM + PD TY +V+ L + G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ ME+ P V Y+ ++ GLCK K +++A F+ M +GI P T L +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 300 CLCNYGRWSDASRLLSDMIER 320
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 153/287 (53%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G + + LL AL K + A Q FD +++P +++Y+ L+ + L
Sbjct: 288 MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNL 347
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE+ D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 348 VEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTML 407
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M+ P+V TY C++ ++++ +L+EM ++G
Sbjct: 408 IRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGC 467
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK-LLVRVGRFDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K V +
Sbjct: 468 PPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGC 527
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VWE M +RG P V++Y+V ++G + G+ EEA KY E M+++G+
Sbjct: 528 AVWEEMHQRGICPDVNSYTVFINGHI-RHGRPEEAYKYIEEMINKGM 573
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M+E G+ P + + ++ L + + A + F+ K + P V TY++L+R G+
Sbjct: 357 MLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGK 416
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F+EM E KC D+ + LL A +D +L EM G PDA +Y+
Sbjct: 417 MDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNA 476
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I N R+ M + L P + TYN +++ + + +EM +R
Sbjct: 477 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQR 536
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G PD SY + H A + I M + + + YN + G+ D
Sbjct: 537 GICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPD 594
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L L LC+ + V H+F KH P+ + + R G + + +ML
Sbjct: 185 LSALSPPLCEAVVLAVLHRF----KHAHRPSYRFF----RWATVSGGFTHTTITYCKMLH 236
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIHAFCEANDIH 131
IL E+M M++EM GA DAF + I +F A +I
Sbjct: 237 ------ILGKTRQFESMV---------AMIQEMGKAGALSMDAFK--VAIKSFAAAGEIK 279
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ V + M++ V ++NC++ L K EA Q+ D+M + +PD SY A++
Sbjct: 280 NAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALM 338
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C+ + A R+ M ++ + PD +N +++ L+R R A +++E M+ +G
Sbjct: 339 LAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPP 398
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+V TY++++ C K+GK++ A + FE M + P +T L LVG G
Sbjct: 399 PNVWTYTMLIRDHC-KQGKMDMAMECFEEMQEAKCQPDVATYTCL---LVGYGN------ 448
Query: 312 LADKMERSTS 321
A +M+R T+
Sbjct: 449 -AKQMDRVTA 457
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 156/303 (51%), Gaps = 2/303 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
++P+ Y + L+H LC+R V+ A D+ P V TY+IL+ +A
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L D M C + + +N L++ MC G++D+A +LR + S G +P +Y+ +
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A ++ M R N PN T+N +I LC+ +++A QLL++M + G +
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YNAI+ C++ V+ A+ L+++M PD TYN +LK L ++ A E+ ++
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + G P T++ ++ LC +KG + +A + F+ M D+G P S T + + L
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLC-QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 461
Query: 305 FLD 307
LD
Sbjct: 462 KLD 464
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + + LL A CK + + A + D + E TP TY++L+ G+ G+
Sbjct: 193 MLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L + C + +N++L+ +C A +A ++ EM P+ ++++
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C + ++L+ M ++ N+ TYN II LC+ V+ A LL +M G
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +L C A+ A L+ MT+ +PD T+N ++ L + G A
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV++ M +G P+ TYS ++ GL K KL++A + F M +G P
Sbjct: 433 EVFKQMPDKGCTPNSITYSTIISGLAKAT-KLDQALELFNEMGHKGFNP 480
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 147/304 (48%), Gaps = 3/304 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KPS + + +L LC + A + E P T+++++ L G L +A
Sbjct: 267 GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQA 326
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ++M + C +I+ +N+++ +C+ N+D A G+L +M+S G +PD +Y+ +
Sbjct: 327 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 386
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A ++D+M + +P+ T+N +I LC+ + +A ++ +M ++G P+
Sbjct: 387 LCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPN 446
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ I++ +++ AL L M + PD+ Y ++ + L + A +
Sbjct: 447 SITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVR 505
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ G P Y+ ++ GLC + GK E A MV G P T +L L
Sbjct: 506 KLQDSGISPHTVLYNAILLGLC-RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYE 564
Query: 304 GFLD 307
G+L+
Sbjct: 565 GYLN 568
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 9/272 (3%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
D+ L AL R + A + +++ P + LVR L G +A ++
Sbjct: 75 DRRLSALVHRGDLDAALRLVESSPRP--PDAALANRLVRDLCRRGRPDDAERVVGACGPA 132
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
++A+ +L + C+AG + +A R + + +P+A++Y+ IH CE +
Sbjct: 133 ---ATVVAYGALTDGYCRAGRLGDAR---RVVGGMPVQPNAYTYNPLIHTLCERGQVRDA 186
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
VLD M P+V TYN ++ CK +A +L+D M G P+ +YN ++
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C +V+ AL L+ + P YN VLK L R+ A E+ M + P+
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+T++V+++ LC +KG L++A + E M G
Sbjct: 307 EATFNVVIYSLC-RKGLLQQAIQLLEKMSKHG 337
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M +G KP I + LL LC A + DN ++ P T++ L+ L G
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F +M ++ C + + +++++ + KA +D+A + EM G PD Y +
Sbjct: 428 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQL 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + I + + ++ + P+ YN I+ LC+N K E A ++ M+ G
Sbjct: 487 LAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG 546
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PD+ +Y ++ +N A L+ ++ +V+
Sbjct: 547 CMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVL 583
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + +L+ LCK K+ + + + TP TY+ L+ + + EA
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++FDEM R D+++ +SL+ + + G++ +A REM G PD Y+I I
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + ++ D M +V TYN + LCK + +A L +EM+ERG PD
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ +C ++ AL L M + N+ PD+ TYN ++ + G RA E+W+
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M ++ P +Y +++G C G L EA + M+++GI P T L
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFC-SSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 156/330 (47%), Gaps = 37/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ L + H+ A F + + P Y+IL+ G G LS+A
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKA------------------------------- 92
K+ DEML R C +D++ +N+ L +CK
Sbjct: 452 LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Query: 93 ----GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
GN+D+A + M +PD +Y+ I FC+A ++ + D M R +++P+
Sbjct: 512 YCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+Y ++ C + + EA L D+M+E+G P+ + N ++ +C ++ A ++
Sbjct: 572 HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLS 631
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M ++PD +YN ++ ++ ++A + MEKRG ++ TY+++++G C +
Sbjct: 632 KMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE- 690
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
GK++EA + M++ GI P +T L N
Sbjct: 691 GKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G + + L+ LCK+K A F+ + P T++ L+RG G
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF+ M+ D + +N+L++ CKAG + A + +M PD SY
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + + D M + PN+ T N +I+ C++ + +AY+ L +MI G
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +SYN ++ + A + A LI M K + + TYN++L G+ A
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+V M + G P +TYS +++G + ++EA ++ + M+ G+ P
Sbjct: 698 QVLRKMIEIGINPDGATYSSLINGHVSQD-NMKEAFRFHDEMLQRGLVP 745
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P+ + LL +C+R ++ A + FD ++ P + ++S L+ L G
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F EM D + + L++ C+ G + +A M EM + G D +Y+
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F++ C+ + + M +VP+ +T+ +IR CK+ +++A L + M+
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +YN ++ C E+ A L M +++++PD +Y VL G A
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M ++G P++ T + ++ G C + G + +A +Y M+ GI P S + L +
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYC-RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 300 LVGLGFLDIIEILADKMER 318
+ L+ IL ++ME+
Sbjct: 652 YLKEANLEKAFILINEMEK 670
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 3/295 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ SI ++LL L + V +A + + + V T +I+V L +
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+M + DI+ +N+L+ A C+ G ++EA +L S G EP +Y+ ++
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ VL M + L PN TYN ++ ++C+ + + EA ++ DEM RG PD
Sbjct: 337 LCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
S+++++ + AL M + ++PD Y +++ R G A ++ +
Sbjct: 397 LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLR 297
M RG + V TY+ ++GLCKKK +A F MV+ G +P + + ++R
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKK-MFADADMLFNEMVERGMVPDFYTFTTLIR 510
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+V GI+ ++Y L+ +++ALCK RK V D + TY+ L+ G
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L + R +L +N++L +CK G D A +L EM +G P+A +Y+
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C ++I + D M R ++P++ +++ +I L +N + +A EM G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C ++ AL++ M D TYN L L + F A
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +RG P T++ ++ G C K G +++A FE MV + P T L +
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYC-KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 300 LVGLGFLDIIEILADKMER 318
G + + L D M R
Sbjct: 547 FCKAGEMGRAKELWDDMIR 565
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 118/219 (53%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV +KP + L+ CK + A + +D+ + + P +Y ++ G G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L D+MLE+ +++ N+L++ C++G++ +A+ L +M S G PD+FSY+
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ F +++ M++ L N+ TYN I+ C K++EA Q+L +MIE G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
NPD +Y++++ H + + A R M + ++PD
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y +LVR +L E + F + + V I A N LL + + G +D A + E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G E + ++ +I ++A C+ +V L M+ + ++ TYN +I C+ VE
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA+QLL+ RG P +YNAIL C + + A ++ M + + P+ TYN +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ R A E+++ M +RG P + ++S ++ G+ + G L +A +F M GI
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI-GVLARNGHLYQALMHFREMERSGI 428
Query: 287 PP 288
P
Sbjct: 429 VP 430
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 159/326 (48%), Gaps = 37/326 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP++ ++ ALCK + V A+ F + + V TYS L+ G G+L EA
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------------- 102
L +EM+ + ++ +N L++A+CK G + EA +L
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 103 ------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
M +G PD +Y+I I+ FC+ + + M + N+VP +
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY+ +I LCK+ ++ + L+DEM +RG D +Y++++ C ++ A+ L +M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + P+ T+ ++L L + GR A EV++ + +G++ +V TY+VM++G C K+G
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC-KQGL 494
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
LEEA M D G P + T E +
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETI 520
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ LC + VK A F D F +Y+ L+ G+ +G+ A
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 183
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ R ++ ++++++A+CK + EA+G+ EM G D +YS I+
Sbjct: 184 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +L+ M + PNV+TYN ++ LCK KV+EA +L M++ PD
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ + EV A + M+ V PD HTY +++ + D A +++
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++ P + TYS ++ GLC K G++ + M D G P T L + L
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLC-KSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Query: 304 GFLDIIEILADKME 317
G LD L +KM+
Sbjct: 423 GHLDRAIALFNKMK 436
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P + L+ L++ C + K + P T + L++GL G++ +A
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L + ++ +++ +L+ +CK G+ A +LR++ +P+ YS I A
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDA 208
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + +V TY+ +I C K++EA LL+EM+ + NP+
Sbjct: 209 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPN 268
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ C +V A ++ M K V PD TY+ ++ V +A V+
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE----GIPPYSSTVEML 296
+M G P V TY+++++G CK K ++EA F+ M + GI YSS ++ L
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNK-MVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------------------------- 33
MV I P++Y + L+ ALCK VK A
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 34 -DNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
A+H F TP V TY+IL+ G + EA LF EM ++ I+ ++S
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ +CK+G I ++ EMR G D +YS I C+ + + + MK
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN+FT+ ++ LCK ++++A ++ +++ +G + + ++YN ++ HC + + AL
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++++M +P+ T+ ++ L + D+A ++ M RG
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 7/220 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+ P ++ L++ CK K V A F + P + TYS L+ GL G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ L DEM +R P D++ ++SL++ +CK G++D A + +M+ P+ F+++I
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C+ D VF+ L + K Y+L NV+TYN +I CK +EEA +L +M
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLT-KGYHL--NVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ G P+ +++ I+ + E + A +L+ +M ++
Sbjct: 507 DNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + +A F+ ML + I+ N +L++ K + A + + G +PD +
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+I I+ FC I F VL + + P+ T N +I+ LC +V++A D+++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G ++ SY ++ C + A++L+ ++ P+ Y+ ++ L +
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ M +G V TYS +++G C +GKL+EA MV + I P T +L
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFC-IEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 297 RNRL 300
+ L
Sbjct: 276 VDAL 279
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I +++L + K KH A + + P + T +IL+ +G+++ +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+R P D + N+L++ +C G + +A ++ + G + + SY+ I+ C+
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D ++L + PNV Y+ II LCK YQL+ E
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK-------YQLVSE------------ 217
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
A L + MT + + D TY+ ++ G+ A + M
Sbjct: 218 ----------------AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ P+V TY+++V LC K+GK++EA +M+ + P
Sbjct: 262 LKTINPNVYTYNILVDALC-KEGKVKEAKSVLAVMLKACVKP 302
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 157/299 (52%), Gaps = 7/299 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
EFGI + LL LC+ KHV+ A F + + EF +K ++++ G +G + E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++ + +++ KC D++++ +++ A+ K G + +A + R M PD + I
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-- 180
A C I V + PNV TYN +++ LCK + E+ ++L++EM +G
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSC 385
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P++ +++ +L Y +V++ L RM K YN++ +L V+ + ++ E
Sbjct: 386 SPNDVTFSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVRE 442
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+W ME+ G P TY++ +HGL KGK+ EA YF+ M+ +G+ P T EML N+
Sbjct: 443 IWSEMERSGLGPDQRTYTIRIHGL-HTKGKIGEALSYFQEMMSKGMVPEPRT-EMLLNQ 499
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP ++ + +++ LCK K+++ + K +P TY+IL+ + +A
Sbjct: 319 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FDEM + D+++ ++L+ + K G +D+A R+M++ G PD Y+I I
Sbjct: 379 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 438
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +V D M V +V TYN I+ LCK + + EA +L EM ERG PD
Sbjct: 439 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 498
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ + +N A+ L M + N+ PD TYN ++ + ++ E+W
Sbjct: 499 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 558
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M R YP+ +Y ++++G C G + EA + ++ MV++G
Sbjct: 559 DMISRRIYPNHISYGILINGYC-NMGCVSEAFRLWDEMVEKG 599
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 37/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ L K + A ++F + K+ P Y+IL+ G G +SEA
Sbjct: 389 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 448
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ DEMLE+ C +D++ +N++L +CK + EA + EM G PD ++++ I+
Sbjct: 449 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +++ + + M + NL P+V TYN +I CK ++E+ +L ++MI R P+
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568
Query: 184 EWSYNAILAYHCDRAEVNMALRL-----------------------------------IT 208
SY ++ +C+ V+ A RL ++
Sbjct: 569 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 628
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + ++PD TYN ++ ++ DRA + ME G P V TY+V+++G ++
Sbjct: 629 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF-SRQ 687
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G+++EA M++ G+ P ST L N
Sbjct: 688 GRMQEAELIMLKMIERGVNPDRSTYTSLIN 717
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+V G++ ++Y L+ +++ALCK + ++ F + + + P V TY+ L+ G
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L D M + + +N+++ +CK G A G+L EM IG PD +Y+I
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C +++ R+ D M +VP++ +++ +I L KN +++A + +M G
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C ++ AL++ M ++ + D TYN +L L + A
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M +RG +P T++ +++G K G + +A FEMM+ + P
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGY-SKDGNMNKAVTLFEMMIQRNLKP 532
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 4/282 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++DL L+ + + ++ + F K + ++ + L+ GL VG + A
Sbjct: 181 GSNPLVFDL--LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ E++ V++ N ++ A+CK I+ L +M G PD +Y+ I+A
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + F ++DSM L P VFTYN II LCK K A +LDEM++ G +PD
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C + A R+ M + V+PD +++ ++ LL + G D+A + +
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M+ G P Y++++ G C + G + EA K + M+++G
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFC-RNGVMSEALKVRDEMLEQG 459
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G + + +L+ LCK K + A + F + + P T++ L+ G G
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 514
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF+ M++R D++ +N+L++ CK +++ + + +M S P+ SY I
Sbjct: 515 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 574
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + FR+ D M + T N I++ C+ +A + L M+ +G
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ ++ A L+ +M ++PD TYN++L R GR A
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 694
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M +RG P STY+ +++G + L+EA + + M+ G P
Sbjct: 695 LIMLKMIERGVNPDRSTYTSLINGHVTQN-NLKEAFRVHDEMLQRGFVP 742
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KP + + L+ CK + KV + D P +Y IL+ G ++G
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +L+DEM+E+ I+ N++++ C+AGN +A L M G PD +Y+
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + ++ F +++ M+ L+P+V TYN I+ + +++EA ++ +MIERG
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
NPD +Y +++ H + + A R+ M + +PD
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 137/305 (44%), Gaps = 21/305 (6%)
Query: 23 RKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDVGELSEARKLFDEMLER------ 73
R+++++ +F D+ F +++++S ++ L L +A+ + M+ +
Sbjct: 108 RENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRV 167
Query: 74 -----------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
C + L + L+ +A + E R ++S G + + +
Sbjct: 168 EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 227
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ + + + + R + NV+T N +I LCKN+K+E L +M E+G P
Sbjct: 228 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 287
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +YN ++ +C + + A L+ M+ + + P TYN ++ L + G++ RA V
Sbjct: 288 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 347
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M K G P +TY++++ C+ + +A + F+ M +G+ P + L L
Sbjct: 348 DEMLKIGMSPDTATYNILLVECCRNDNMM-DAERIFDEMPSQGVVPDLVSFSALIGLLSK 406
Query: 303 LGFLD 307
G LD
Sbjct: 407 NGCLD 411
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
Query: 16 LLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ +LCK +K F + P V YS L+ GL VG+L EA LFDEM+ +
Sbjct: 85 VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ +NSL+ A C+ G EA +M G PD +++ I + + +
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ + M + PN+ TYN ++ LC + +++ A +L + M+ERG D SYN ++ +
Sbjct: 205 KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A+ L +M E + P TY ++LK L + GR A E++ +M+ G PS+
Sbjct: 265 CTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSL 324
Query: 255 STYSVMVHGLCKKKGKLEEACKYF 278
TY+V++ GLC K G +EEA F
Sbjct: 325 DTYTVLLDGLC-KNGCIEEAIDVF 347
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GIK ++ + L+HA C+ K A + F E P V T++ L+ L G+
Sbjct: 140 MVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGK 199
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+F+ M+++ +I+ +NSLL +C +D A + M G + D SY+
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + + M+ L P++ TY +++ L +N ++ A +L + M G
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +Y +L C + A+ + + P Y++++ + + R++ A
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E+++ + G P++ TY++M++GLC K+GKL EA + F M + G
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLC-KEGKLLEAERLFVQMEESG 424
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K + P + T S LV+G+ G++ +A +LFD+M DIL + L+ A+ K
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A + R M S + F+Y + I + C+ ++ M + PNV Y+ +I
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LC+ K+ EA L DEM+ +G + +YN+++ C A R ++M E ++
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD T+ ++ L + G+ A +++E M K+G P++ TY+ +++GLC +++ A +
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHH-QMDHAVR 240
Query: 277 YFEMMVDEGI 286
FE+MV+ GI
Sbjct: 241 LFEVMVERGI 250
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE GIK + + L++ C + A F ++E TP++ TY+IL++ L G
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++LF+ M + + LL+ +CK G I+EA + R ++SI +P YSI
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSI 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A S + D + LVPN+ TYN +I LCK K+ EA +L +M E G
Sbjct: 365 LIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
DE S+N I+ +V A+ + RM ++N P+ M++ L
Sbjct: 425 CEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNL 473
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 2/297 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ + L+ +C V A + FD + F + Y L+ L + A
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ML C + + +++++CK G + M REM ++G P+ YS I+
Sbjct: 64 VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + D M + NV TYN +I C+ +EA + +M+ G PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ ++ + + +V A ++ M K+ P+ TYN +L L + D A ++E
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M +RG V +Y+ +++G C GK EEA F M E + P +T +L L
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTS-GKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
++ G P+ + + ++ C +V AL L +MT+ D Y ++ L + +
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSS 291
RA E+ M + TY +++ LC K G + K F M++ GI P YSS
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLC-KDGLAIKGLKMFREMINMGICPNVIVYSS 119
Query: 292 TVEML 296
+ L
Sbjct: 120 LINGL 124
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP ++ + +++ LCK K+++ + K +P TY+IL+ + +A
Sbjct: 162 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 221
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FDEM + D+++ ++L+ + K G +D+A R+M++ G PD Y+I I
Sbjct: 222 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 281
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +V D M V +V TYN I+ LCK + + EA +L EM ERG PD
Sbjct: 282 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 341
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ + +N A+ L M + N+ PD TYN ++ + ++ E+W
Sbjct: 342 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 401
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M R YP+ +Y ++++G C G + EA + ++ MV++G
Sbjct: 402 DMISRRIYPNHISYGILINGYC-NMGCVSEAFRLWDEMVEKG 442
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 37/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ L K + A ++F + K+ P Y+IL+ G G +SEA
Sbjct: 232 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 291
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ DEMLE+ C +D++ +N++L +CK + EA + EM G PD ++++ I+
Sbjct: 292 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +++ + + M + NL P+V TYN +I CK ++E+ +L ++MI R P+
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411
Query: 184 EWSYNAILAYHCDRAEVNMALRL-----------------------------------IT 208
SY ++ +C+ V+ A RL ++
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 471
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + ++PD TYN ++ ++ DRA + ME G P V TY+V+++G ++
Sbjct: 472 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF-SRQ 530
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G+++EA M++ G+ P ST L N
Sbjct: 531 GRMQEAELIMLKMIERGVNPDRSTYTSLIN 560
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+V G++ ++Y L+ +++ALCK + ++ F + + + P V TY+ L+ G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L D M + + +N+++ +CK G A G+L EM IG PD +Y+I
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C +++ R+ D M +VP++ +++ +I L KN +++A + +M G
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C ++ AL++ M ++ + D TYN +L L + A
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M +RG +P T++ +++G K G + +A FEMM+ + P
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGY-SKDGNMNKAVTLFEMMIQRNLKP 375
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 4/282 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++DL L+ + + ++ + F K + ++ + L+ GL VG + A
Sbjct: 24 GSNPLVFDL--LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ E++ V++ N ++ A+CK I+ L +M G PD +Y+ I+A
Sbjct: 82 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + F ++DSM L P VFTYN II LCK K A +LDEM++ G +PD
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C + A R+ M + V+PD +++ ++ LL + G D+A + +
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M+ G P Y++++ G C + G + EA K + M+++G
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFC-RNGVMSEALKVRDEMLEQG 302
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G + + +L+ LCK K + A + F + + P T++ L+ G G
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF+ M++R D++ +N+L++ CK +++ + + +M S P+ SY I
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 417
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + FR+ D M + T N I++ C+ +A + L M+ +G
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ ++ A L+ +M ++PD TYN++L R GR A
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 537
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M +RG P STY+ +++G + L+EA + + M+ G P
Sbjct: 538 LIMLKMIERGVNPDRSTYTSLINGHVTQN-NLKEAFRVHDEMLQRGFVP 585
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KP + + L+ CK + KV + D P +Y IL+ G ++G
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +L+DEM+E+ I+ N++++ C+AGN +A L M G PD +Y+
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + ++ F +++ M+ L+P+V TYN I+ + +++EA ++ +MIERG
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
NPD +Y +++ H + + A R+ M + +PD
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 36/262 (13%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ +LVR +L E + F + + V I A NSLL + K G +D A + +E+
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G + NV+T N +I LCKN+K+
Sbjct: 89 VRSGVQV-----------------------------------NVYTLNIMINALCKNQKI 113
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E L +M E+G PD +YN ++ +C + + A L+ M+ + + P TYN +
Sbjct: 114 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 173
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + G++ RA V + M K G P +TY++++ C+ + +A + F+ M +G
Sbjct: 174 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND-NMMDAERIFDEMPSQG 232
Query: 286 IPPYSSTVEMLRNRLVGLGFLD 307
+ P + L L G LD
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLD 254
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
N N ++ ++R + K+ E + + +G + N++L V++A
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + + V + +T N+++ L + + + ME++G +P V TY+ +++
Sbjct: 82 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
C ++G LEEA + + M +G+ P T + N L G
Sbjct: 142 YC-RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG 181
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 3/293 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
++ G KP + L+ + + K V+ F++ + + F P V++YSIL+ GL G+
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +F M ++ +D A+N++++ CK+G + +A+ +L EM+ +P +Y
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + + K + NV Y+ +I K +++EAY +L+EM+++G
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N++L E+N AL M + P+ +TY++++ L RV ++++A
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPPYSS 291
W+ M+K+G P+V TY+ M+ GL K G + +A FE + GIP +S
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLA-KVGNITDAYSLFERFKANGGIPDAAS 544
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G+KP ++ LCK + A + F + E + P Y+ ++ G G G +A
Sbjct: 13 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL + + ER C +++ NS+L + K +DEA + M+ AEP++ +Y+I I
Sbjct: 73 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 131
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +R+LD M+ +L PN+ T N ++ +LCK K+EEAY++ + +RG NPD
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRM--------------------------------- 210
+Y +++ + +V+ A RL +M
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251
Query: 211 --TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ PD N + + + G ++ ++E + GF P V +YS+++HGL K
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL-TKA 310
Query: 269 GKLEEACKYFEMMVDEGI 286
G+ E F M +G
Sbjct: 311 GQARETSNIFHAMKQQGF 328
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 123/223 (55%), Gaps = 2/223 (0%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A K F E+ + D +++ S++ +CKAG + EA + +M + + P A++Y+ I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ A +++L+ ++ +P+V ++N I+ L K KV+EA L E++++ A P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN I+ C V A R++ M ++ P+ T N+++ L + + + A +++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
ES +RG P TY ++ GL KKG+++EA + FE M+D G
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGL-GKKGQVDEAYRLFEKMLDAG 222
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G PS+ + +L L K++ V A F+ K + P TY+I++ L G + E
Sbjct: 81 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 140
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ DEM ++L N +++ +CKA ++EA+ + G PD +Y I
Sbjct: 141 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 200
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ + +R+ + M N Y +IR + + E+ +++ E+I RG P
Sbjct: 201 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 260
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D N + EV + + +PD +Y++++ L + G+ + ++
Sbjct: 261 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 320
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+M+++GF Y+ +V G C K GK+ +A + E M ++ + P +T + + L
Sbjct: 321 HAMKQQGFALDARAYNAVVDGFC-KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 379
Query: 303 LGFLD 307
+ LD
Sbjct: 380 IDRLD 384
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ ++ L+ K + A+ + K TP V T++ L+ L E++EA
Sbjct: 397 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 456
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F M E KCP + ++ L+ +C+ ++A ++M+ G P+ +Y+ I
Sbjct: 457 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 516
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ +I + + + K +P+ ++N +I + + EAYQ
Sbjct: 517 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
MA + + + + PD +Y ++ +L + GR A E++ ME P Y+ M+
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPP 288
G G+ E+A K E + + G P
Sbjct: 61 MGY-GSAGRFEDAYKLLERLRERGCIP 86
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 36/323 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++ L+ CK +V A F V+TYS+L+ GL G+
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +F E+ E+ + +NSL+ CK GN+D+A +L EM G PD +Y+I
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A +I + D ++ L PN TY ++ CK++ A+QLL+EM+ RG
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 180 ANPDEWSYNAILAY----------------------------------HCDRAEVNMALR 205
PD + YN IL + +C ++ A
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 786
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M ++ +P+ TY ++ + G A +W M++R P+ TY+ ++HG
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY- 845
Query: 266 KKKGKLEEACKYFEMMVDEGIPP 288
G + E FE MV +GI P
Sbjct: 846 HNIGNMSEVSALFEEMVAKGIEP 868
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH-QFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P +Y D L++ C K + A + P TY+ L+ G G+
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++ DEM+ +++ N+LL +CKAG +++A +++EM G EPD+ +YS+
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 386
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ F +LD MK+ L P V TY+ II LC+ ++ +L EM+ G
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ H V + ++ RM ++ ++PD YN ++ + R + A
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
M +R P+ TY + G K G++E A +YF M+ G+ P Y++ +E
Sbjct: 507 TYLMEMLERRLRPNAHTYGAFIDGY-SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 564
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 3/286 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+ P+ + + L+ CK+ +V A Q + P + TY+IL+ GL GE+
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 678
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A+ LFD++ R + + + ++++ CK+ N A +L EM G PDAF Y++ +
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ + M V ++N +I CK+ K++EA LL+EMIE+
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y +++ ++C + A RL M + NVMP TY +L +G + +
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+E M +G P TY VM+ C ++G + EACK + ++ +G+P
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDAYC-REGNVMEACKLKDEILVKGMP 902
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP+ L+ A K V+ + + + + P V Y+ L+ G
Sbjct: 442 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 501
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR EMLER+ + + + ++ KAG ++ A EM S G P+ Y+
Sbjct: 502 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 561
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ ++ F V + ++ +V TY+ +I L +N K+ EA+ + E+ E+G
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN++++ C + V+ A +L+ M + + PD TYN+++ L + G +RA
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ +E RG P+ TY+ MV G CK K A + E M+ G+PP
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP-TAAFQLLEEMLLRGVPP 729
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G++P L+ C+ +++ A + D K + PTV TYS+++ GL G
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + EM+ + + + +L+ A K G ++E+ +L MR G PD F Y+
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+A + L M L PN TY I K ++E A + +EM+ G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y A++ HC V A + + V+ D TY++++ L R G+ A
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ ++++G P+ TY+ ++ G CK+ G +++A + E M +GI P T +L +
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQ-GNVDKASQLLEEMCIKGINPDIVTYNILIDG 670
Query: 300 LVGLGFLDIIEILADKME 317
L G ++ + L D +E
Sbjct: 671 LCKAGEIERAKNLFDDIE 688
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 159/317 (50%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI+ ++ + LL+ +CK ++ A + + P +TYS+L+ G
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 396
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A +L DEM +RK +L ++ ++ +C+ GN+ + +LREM G +P+A Y+
Sbjct: 397 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A + + +L+ M+ ++P+VF YN +I CK +++EEA L EM+ER
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y A + + E+ +A R M V+P+ Y +++ + G A
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V+ + R V TYSV++HGL + GK+ EA F + ++G+ P + T L +
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGL-SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 635
Query: 300 LVGLGFLDIIEILADKM 316
G +D L ++M
Sbjct: 636 SCKQGNVDKASQLLEEM 652
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 19/303 (6%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVG---- 58
F +PS+ + LL L K V++ + FD H+ P V TY+ ++ VG
Sbjct: 183 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 242
Query: 59 ------ELSEARKLFDEMLERKCPV-------DILAHNSLLEAMCKAGNIDEAHGMLREM 105
E+ E +L DE +E K + D+ ++ L+ C EA ML EM
Sbjct: 243 AKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 302
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+G +P+ +Y+ I F DI FR+ D M + N+ +N ++ +CK K+
Sbjct: 303 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 362
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E+A +++ EM+E+G PD +Y+ ++ HC + A L+ M K + P TY+++
Sbjct: 363 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 422
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L R G + M G P+ Y+ ++ K+G++EE+ E M ++G
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA-KEGRVEESRMILERMREQG 481
Query: 286 IPP 288
I P
Sbjct: 482 ILP 484
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 18/280 (6%)
Query: 26 VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
V+ + F EF P++ + + L+ L ++ K+FD M K D+ + ++
Sbjct: 171 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 230
Query: 86 LEAMCKAGNIDEAHGMLREM--------------RSI---GAEPDAFSYSIFIHAFCEAN 128
+ A CK GN+ +A +L EM RS+ G PD ++Y I I+ FC
Sbjct: 231 ISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 290
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+L M L P TYN +I + +E+A+++ DEM+ G + +N
Sbjct: 291 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 350
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+L C ++ AL ++ M ++ V PD TY+++++ R RA E+ + M+KR
Sbjct: 351 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 410
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V TYSV+++GLC + G L+ MV G+ P
Sbjct: 411 KLAPTVLTYSVIINGLC-RCGNLQGTNAILREMVMNGLKP 449
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+++ K G + EA + ++ P S + + + N + ++V D M +
Sbjct: 160 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 219
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEA----------YQLLDE-------MIERGANPDEWSY 187
++P+V+TY +I CK V++A +LLDE M+++G PD ++Y
Sbjct: 220 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTY 279
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
+ ++ C A ++ M + P+ TYN ++ +R G ++A + + M
Sbjct: 280 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA 339
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G ++ ++ +++G+C K GK+E+A + + M+++G+ P S T +L
Sbjct: 340 CGIEANLIIWNTLLNGVC-KAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
RS P++ + + + ++ + + V K + P++ + N ++ L K KV
Sbjct: 146 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 205
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E +++ D M PD ++Y +++ HC V A R++ M ++ +
Sbjct: 206 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARL--------- 256
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
D A E+ SM +G P + TY ++++G C +K E E M+D G
Sbjct: 257 ---------LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE-MIDVG 306
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
+ P T L + + G ++ + D+M +C I+
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEM---VACGIE 343
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 158/318 (49%), Gaps = 5/318 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P I ++ LCK ++ A F+ + PT TY+ L+ G G++ EA
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFE--EMSCAPTAITYNSLIGGYCRAGDMDEAI 307
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M++ C D++ + +L+ A CK G +D+A+ + ++M + PD +++ +
Sbjct: 308 RLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 367
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ + R P ++TYNC++ CK+ +V +A +L+ + RG P+
Sbjct: 368 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNT 427
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKEN--VMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+YN ++A C + AL+ + ++ E Y ++L L R GR D A + +
Sbjct: 428 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 487
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E M +RG+ P+ +T++ +V LCK + ++A + E M+ G P T + + +
Sbjct: 488 EEMIQRGYVPAAATFATVVFALCKAH-QPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 546
Query: 303 LGFLDIIEILADKMERST 320
G + + LA ++ T
Sbjct: 547 AGMIQKADELASELRLYT 564
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ P + ++ LC+ ++ A + P TY+ LV GL G L +A
Sbjct: 110 GMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAV 169
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ EM+ + D +++++C +D+A ++ EM G +A +YS +
Sbjct: 170 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 229
Query: 125 CEANDI-HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + +V +L + R P++ TY+ +I LCK ++ +A + +EM P
Sbjct: 230 CKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPT 286
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ +C +++ A+RL+ +M +N PD TY ++ ++GR D A E+++
Sbjct: 287 AITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQ 346
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M P V T++ +V GLC +G++E+A + E + G PP
Sbjct: 347 QMVANKLSPDVVTFTSLVDGLC-GEGRMEDALELLEEITRRGCPP 390
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 8/305 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ P +L+ +L LC + A FD TY L+ L L EA
Sbjct: 41 GLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAM 100
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +M R L HN ++ +C+AG + A G+ R+M PD +Y+ +H
Sbjct: 101 GLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGL 159
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+A + +VL M VP+ T +++ LC ++V++A +L++EM+ RG +
Sbjct: 160 SKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 219
Query: 185 WSYNAIL--AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y+A++ C+R + +AL L+ +T+ PD TY+ V+ L + GR A +++
Sbjct: 220 ITYSALVDGLCKCERLDEAVAL-LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 278
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E M P+ TY+ ++ G C + G ++EA + MVD+ P T L +
Sbjct: 279 EEMS---CAPTAITYNSLIGGYC-RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334
Query: 303 LGFLD 307
+G LD
Sbjct: 335 MGRLD 339
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 3/248 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ P + L+ A CK + A++ F ++ +P V T++ LV GL G
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L +E+ R CP I +N +++ CK+ + +A ++ + RS G P+ +Y+I
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYN--LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ C A + LD + +V Y I+ LC++ + ++A Q +EMI+
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 492
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG P ++ ++ C + A L+ M K P T + V+ R G +
Sbjct: 493 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 552
Query: 238 ATEVWESM 245
A E+ +
Sbjct: 553 ADELASEL 560
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L E+R G PD + + C+A D + + D M V + YN +I LC
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLC 91
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++EA LL +M RG NP +N ++ C + AL + +M + PD
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFL 150
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY ++ L + GR A +V + M P +T +V+V LC ++++A + E
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD-RVDDARELVEE 209
Query: 281 MVDEGIPPYSSTVEMLRNRL 300
M+ G+ + T L + L
Sbjct: 210 MLHRGMAANAITYSALVDGL 229
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 151 TYNCIIRKLCKNEKVEE-AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
T+ ++R L + K+ LLDE+ +RG +PD N ILA CD + A+ L +
Sbjct: 12 TFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDK 71
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + + YN++ L + D A + M+ RG P ++V++ GLC + G
Sbjct: 72 MAELGAVNHTTYYNLI-HPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC-RAG 129
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
+L A + M D P + + +++ D +++L
Sbjct: 130 RLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVL 172
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 161/329 (48%), Gaps = 4/329 (1%)
Query: 2 VEF-GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+EF GI+ I+ L L++ C V K P++ T++ L+ GL G+
Sbjct: 88 IEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGK 147
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + L+D+ML R ++ +N ++ ++ K+G +EA G L++M +G P+ +YS
Sbjct: 148 MDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYST 207
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C + V D M PNV+TY ++ CK E++EEA QLLDE + +G
Sbjct: 208 LIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ I++ C A +L + P+ TY ++L L + G + A
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M++ P++ Y++++ LC K GK+++ + F ++DEG+ P T L
Sbjct: 328 ALFQEMQRSTVKPNLVIYTILIDSLC-KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGA 386
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELA 328
L G + L KME CT + A
Sbjct: 387 LCKEGLIIEAHKLFRKMEED-GCTPDKCA 414
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G++PSI LL+ LC + +D+ P V TY++++ L G+
Sbjct: 123 ILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGK 182
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA +M + C +++ +++L++ C G +DEA + M S G P+ ++Y+
Sbjct: 183 ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTS 242
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +C+ I ++LD R LVP++ T+ II LC+ + A QL + G
Sbjct: 243 LMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHG 302
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +L C + A L M + V P+ Y +++ L + G+
Sbjct: 303 HTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGK 362
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ + G P+V TY+ +V LC K+G + EA K F M ++G P
Sbjct: 363 ELFSRLIDEGLKPNVYTYTALVGALC-KEGLIIEAHKLFRKMEEDGCTP 410
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P++Y + ++++L K A F K P V YS L+ G G+
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR +FD M+ + C ++ + SL+ CK I+EA +L E G PD +++
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A + ++ + + PN+ TY ++ LCK+ +EEA+ L EM
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ C ++ L +R+ E + P+ +TY ++ L + G A
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ ME+ G P Y+V++ G + K A + E MV+ G ++T +L +
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP-SMARQLVEEMVNRGFSADAATRALLND 455
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A F ML RK I+ + L ++ + G+ + + +E+ +G E D S SI I
Sbjct: 45 DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FC + + VL + + L P++ T+ ++ LC K+++ L D+M+ RG
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ ++YN I+ + N AL + +M K +P+ Y+ ++ G+ D A V
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M +G P+V TY+ +++G CK + ++EEA + + + +G+ P
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIE-RIEEAVQLLDETLRKGLVP 270
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 170/350 (48%), Gaps = 7/350 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +FG KP ++ + +LH + +++ +A ++ K + P T+ IL+ GL G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A K+FDEM ++ P + + + +L +C+A D+ H +L M+ G PD+ + +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ I F +L ++ V + Y+ +I L + ++ +E + +M + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C+ V+ AL ++ MT+ + PD + YN ++K VG D+A
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + K +P+ TY++++ G+C + G L+EA + F M + G P T L +
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMC-RNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 300 LVGLGFLDIIEILADKMERSTSCTI-----QELANAMRGKTGFRKSRSEE 344
L G L+ L KME + ++ Q M GF + EE
Sbjct: 456 LCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREE 505
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 7/301 (2%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
N+ + P T+S+L+ G +A + F +M + C D+ +NS+L M +
Sbjct: 124 NSNIQIPPP--TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEV 181
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
A + +M + P+ ++ I ++ C+ ++ D M + + PN Y
Sbjct: 182 FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTI 241
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
I+ LC+ ++ ++ ++LL+ M G PD + NA+L C +++ A L+ KE
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ Y+ ++ L R R+D E M K G P V Y++++ G C + G ++ A
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC-EVGMVDYA 360
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS----TSCTIQELANA 330
M G+ P + L +G LD L ++ ++ TSCT L
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420
Query: 331 M 331
M
Sbjct: 421 M 421
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
T+++++ L K+ +E+ + + L+ A K+G ++A +M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G +PD F+Y+ +H + V + M + N PN T+ ++ LCKN K
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++A ++ DEM ++G P+ Y IL+ C + RL+ M PD T N +
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L ++G+ D A + + EK G+ + YS ++ GL + K + +E ++ M G
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAK-RYDEVQEWCRKMFKAG 336
Query: 286 IPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTS 321
I P +L +G +D + +L D +R S
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 154/324 (47%), Gaps = 38/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P Y + L+ C + A + +K++ PT TY+IL+ G+ G
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR++F++M C I+ N+L++ +CKAG ++EA + +M IG P S+
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME-IGKNP-----SL 480
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ A+ RV+D+ ++ V ++ E+A+++LD+M++ G
Sbjct: 481 FLRLSQGAD------RVMDTANGFHRV----------------DREEDAFRVLDQMVKNG 518
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL---VRVGRFD 236
P Y ++ + C + ++++A L + + +P + + LKL G +
Sbjct: 519 CTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS--LPSQE--DETLKLAEEHFEKGELE 574
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+A M + ++ Y++ + GLC+ + + EEA K F ++ + + + ML
Sbjct: 575 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQAR-RSEEALKIFLVLKECQMDVNPPSCVML 633
Query: 297 RNRLVGLGFLDI-IEILADKMERS 319
N L G L++ ++I +E+
Sbjct: 634 INGLCKDGNLEMAVDIFLYTLEKG 657
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T+N +I L K++ + +++L+E+ +++ ++A + A+ +M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
PD TYN +L ++V+ F A V+ M K + P+ +T+ ++++GLCK GK
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKN-GK 216
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANA 330
++A K F+ M +GIPP + ++ + L D + L + M+ S C NA
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 331 M 331
+
Sbjct: 277 L 277
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 55/297 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G PSI + L+ LCK ++ A F K E + L +G V +
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAGELEEARHLF--YKMEIGKNPSLFLRLSQGADRVMDT 494
Query: 61 S----------EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIG 109
+ +A ++ D+M++ C + L+ C+ G + A + L+ +RS+
Sbjct: 495 ANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLP 554
Query: 110 AEPD---------------------------------AFSYSIFIHAFCEANDIHSVFRV 136
++ D Y+I++ C+A ++
Sbjct: 555 SQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKI 614
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
+K + N + +I LCK+ +E A + +E+G N +L
Sbjct: 615 FLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLIL 674
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
+ ++ AL L+ RM D + ++ + L+ VW++ E P
Sbjct: 675 QDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLL---------SVWKAQEMENVAPG 722
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 148/284 (52%), Gaps = 4/284 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P+ + L+H LCKR A + FD TP VKT++IL+ + + G+
Sbjct: 202 MVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQ 261
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF-SYS 118
L EA L M ++ CP D + +N+ L +CKAG +DEA L +R G YS
Sbjct: 262 LKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321
Query: 119 IFIHAFCEANDIHSVFRV-LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I A F+ ++ +++ ++ P++ Y +IR + + +A+ DEM E
Sbjct: 322 CLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKE 381
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G PD + YN +L CD +++ A L++ M + NV+ D HTY ++ L + D
Sbjct: 382 KGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDE 441
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
A +V++ M + G +PSV TY+V++ GL + +LEEA F M
Sbjct: 442 AMQVFDGMVEVGCHPSVMTYNVLIDGLYRAH-RLEEARMLFYKM 484
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 159/347 (45%), Gaps = 10/347 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRK-HVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
EFG +P+ + + +L L V +A ++ P TY++L+ GL G
Sbjct: 168 EFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTP 227
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A KLFDEM+ R ++ H LL +MC AG + EA +L M G PD +Y+ F
Sbjct: 228 VDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAF 287
Query: 121 IHAFCEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + L++++ V + Y+C+I L + EE +Q E++E+
Sbjct: 288 LSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQA 347
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+PD Y ++ + N A M ++ PD YN +LK L G D A
Sbjct: 348 DVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGA 407
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M + + TY+ M+ GLCK++ ++EA + F+ MV+ G P T +L +
Sbjct: 408 RSLMSEMVRNNVVLDIHTYTTMIIGLCKEQ-LVDEAMQVFDGMVEVGCHPSVMTYNVLID 466
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
L L+ +L KME + ++ +R G + R ET
Sbjct: 467 GLYRAHRLEEARMLFYKMEVGNNPSL-----FLRLTLGANQVRDSET 508
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+ + +P + Y+I++RG + G ++A FDEM E+ D +N+LL+A+C AG++D
Sbjct: 346 QADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLD 405
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A ++ EM D +Y+ I C+ + +V D M P+V TYN +I
Sbjct: 406 GARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLI 465
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANP--------------DEWSYNAILAYHCDRAEVNM 202
L + ++EEA L +M E G NP D + ++ C +V
Sbjct: 466 DGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLK 524
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A +L+ + V+PD TYN +L L +V D A ++ ++ +GF TY ++
Sbjct: 525 AYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLID 584
Query: 263 GLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEML 296
L + + +A F+ ++ G +P Y+S + L
Sbjct: 585 SLLRAH-RYNDALTLFQDILHSGGTPSMPIYNSMMRSL 621
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 21/298 (7%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM-LERKCPVDILAHNSLLEAMCKA 92
D P + L+ G EA + F M E C +N++L + +
Sbjct: 129 DAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVAS 188
Query: 93 GN-IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G + A + M + G P+ +Y++ IH C+ ++ D M + PNV T
Sbjct: 189 GGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKT 248
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ ++ +C +++EA LL M ++G PDE +YNA L+ C V+ A+
Sbjct: 249 HTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAI------- 301
Query: 212 KENVMPDRHTYNMVLKL---------LVRVGRFDRATEVW-ESMEKRGFYPSVSTYSVMV 261
E + RHT VL L L GR++ + + E +E+ P + Y++M+
Sbjct: 302 -ERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMI 360
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
G C + G+ +A +F+ M ++G P + L L G LD L +M R+
Sbjct: 361 RG-CAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRN 417
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV--------------KT 46
MVE G PS+ + L+ L + ++ A F + P++ +T
Sbjct: 449 MVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSET 508
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
LV + G++ +A KL +++ D++ +N+LL +CK N+D A + RE++
Sbjct: 509 LQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQ 568
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G D +Y I + A+ + + + P++ YN ++R LC+ +K+
Sbjct: 569 VKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLS 628
Query: 167 EAYQLLDEMIERGAN---PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+A L + + R N DE +A + + ++ A+R + ++ +E + Y
Sbjct: 629 QAINLWFDHLPRKYNLLAQDEVISSARKKF--EEGCLHEAVRELIKIDQEYGSVNSCPYT 686
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGF 250
+ L L++ GR + A +++ +E+ G
Sbjct: 687 IWLIGLIQAGRIEDALKIFHILEESGI 713
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 161/341 (47%), Gaps = 9/341 (2%)
Query: 2 VEFGIKPSIYDLDQLL---HALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLG 55
VE + PS L L+ ALCK H + A + E + P V+ Y+IL+ G
Sbjct: 135 VESDVTPSAEALSPLILTIDALCKEGHPRAAALLVAQIRREDDGWAPDVRIYNILLNGWS 194
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
L +A KL+ M + ++ + + ++A C D A +L +MR G E +
Sbjct: 195 RARRLDKAEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEANLL 254
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+ + ++A A +VL+ Y + PN+ T+N ++ C++ + A ++L M
Sbjct: 255 TCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVLKAM 314
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ RG +P +YN +++ + L +M PDR TY++++K+L R
Sbjct: 315 LGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKMLCEANRL 374
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ ++ + M GF P ++T ++++H LC++ + EEA FE M + G+ P T M
Sbjct: 375 ELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRH-QFEEAFAEFEQMFERGMVPQYITYRM 433
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTG 336
L L LG + +++ LAD M T +L R K G
Sbjct: 434 LMRELKRLGLVKLVQKLADLMRSVPHST--KLPGGYRDKEG 472
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 36/323 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++ L+ CK +V A F V+TYS+L+ GL G+
Sbjct: 556 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +F E+ E+ + +NSL+ CK GN+D+A +L EM G PD +Y+I
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A +I + D ++ L PN TY ++ CK++ A+QLL+EM+ RG
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735
Query: 180 ANPDEWSYNAILAY----------------------------------HCDRAEVNMALR 205
PD + YN IL + +C ++ A
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 795
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M ++ +P+ TY ++ + G A +W M++R P+ TY+ ++HG
Sbjct: 796 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY- 854
Query: 266 KKKGKLEEACKYFEMMVDEGIPP 288
G + E FE MV +GI P
Sbjct: 855 HNIGNMSEVSALFEEMVAKGIEP 877
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAH-QFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P +Y D L++ C K + A + P TY+ L+ G G+
Sbjct: 276 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 335
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++ DEM+ +++ N+LL +CKAG +++A +++EM G EPD+ +YS+
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ F +LD MK+ L P V TY+ II LC+ ++ +L EM+ G
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y ++ H V + ++ RM ++ ++PD YN ++ + R + A
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
M +R P+ TY + G K G++E A +YF M+ G+ P Y++ +E
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGY-SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 573
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 3/286 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+ P+ + + L+ CK+ +V A Q + P + TY+IL+ GL GE+
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A+ LFD++ R + + + ++++ CK+ N A +L EM G PDAF Y++ +
Sbjct: 688 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ + M V ++N +I CK+ K++EA LL+EMIE+
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y +++ ++C + A RL M + NVMP TY +L +G + +
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+E M +G P TY VM+ C ++G + EACK + ++ +G+P
Sbjct: 867 FEEMVAKGIEPDKMTYYVMIDAYC-REGNVMEACKLKDEILVKGMP 911
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 147/286 (51%), Gaps = 2/286 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
F +PS+ + LL L K V++ + FD H+ P V TY+ ++ VG + +
Sbjct: 174 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 233
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++ EM E+ C +++ +N ++ +C+A +DEA + R M G PD ++Y I I+
Sbjct: 234 AKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC +L M L P TYN +I + +E+A+++ DEM+ G
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 353
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +N +L C ++ AL ++ M ++ V PD TY+++++ R RA E+
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 413
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M+KR P+V TYSV+++GLC + G L+ MV G+ P
Sbjct: 414 DEMKKRKLAPTVLTYSVIINGLC-RCGNLQGTNAILREMVMNGLKP 458
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP+ L+ A K V+ + + + + P V Y+ L+ G
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 510
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR EMLER+ + + + ++ KAG ++ A EM S G P+ Y+
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ ++ F V + ++ +V TY+ +I L +N K+ EA+ + E+ E+G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN++++ C + V+ A +L+ M + + PD TYN+++ L + G +RA
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ +E RG P+ TY+ MV G CK K A + E M+ G+PP
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP-TAAFQLLEEMLLRGVPP 738
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G++P L+ C+ +++ A + D K + PTV TYS+++ GL G
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + EM+ + + + +L+ A K G ++E+ +L MR G PD F Y+
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+A + L M L PN TY I K ++E A + +EM+ G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y A++ HC V A + + V+ D TY++++ L R G+ A
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ ++++G P+ TY+ ++ G CK+ G +++A + E M +GI P T +L +
Sbjct: 621 GIFSELQEKGLLPNAFTYNSLISGSCKQ-GNVDKASQLLEEMCIKGINPDIVTYNILIDG 679
Query: 300 LVGLGFLDIIEILADKME 317
L G ++ + L D +E
Sbjct: 680 LCKAGEIERAKNLFDDIE 697
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 159/317 (50%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI+ ++ + LL+ +CK ++ A + + P +TYS+L+ G
Sbjct: 346 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 405
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A +L DEM +RK +L ++ ++ +C+ GN+ + +LREM G +P+A Y+
Sbjct: 406 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 465
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A + + +L+ M+ ++P+VF YN +I CK +++EEA L EM+ER
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y A + + E+ +A R M V+P+ Y +++ + G A
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V+ + R V TYSV++HGL + GK+ EA F + ++G+ P + T L +
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGL-SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644
Query: 300 LVGLGFLDIIEILADKM 316
G +D L ++M
Sbjct: 645 SCKQGNVDKASQLLEEM 661
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ P + + +L+ CK + + A F + + +++ L+ G G+L EA
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEAN 794
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EM+E++ + + + SL++ CKAG + EA + EM+ P A +Y+ +H +
Sbjct: 795 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 854
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
++ V + + M + P+ TY +I C+ V EA +L DE++ +G
Sbjct: 855 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSV 914
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A++ C + E L+L+ + + T +++ + G D A EV S
Sbjct: 915 AAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRS 974
Query: 245 MEKRGFYPSVSTYSVMVHG 263
M K G+ + ++ +V G
Sbjct: 975 MVKFGWVSNTTSLGDLVDG 993
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
RS P++ + + + ++ + + V K + P++ + N ++ L K KV
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E +++ D M PD ++Y +++ HC V A R++ M ++ P+ TYN++
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L R D A E+ SM +G P + TY ++++G C +K E E M+D G
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE-MIDVG 315
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
+ P T L + + G ++ + D+M +C I+
Sbjct: 316 LKPEPITYNALIDGFMRQGDIEQAFRIKDEM---VACGIE 352
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+++ K G + EA + ++ P S + + + N + ++V D M +
Sbjct: 151 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 210
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++P+V+TY +I CK V++A ++L EM E+G +P+ +YN I+ C ++ A+
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + ++PD +TY++++ R A + M G P TY+ ++ G
Sbjct: 271 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 330
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERST 320
++G +E+A + + MV GI L N + G ++ +EI+ + ME+
Sbjct: 331 -MRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E + P+ LLH ++ +V+ F + P TY +++ G
Sbjct: 835 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 894
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL DE+L + P+ + A+++L++A+CK E +L E+ G + S+
Sbjct: 895 VMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSV 954
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
F A ++ VL SM ++ V N + ++ E++ LL +M
Sbjct: 955 IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M F P + LLH L K + ++ +FF D P+V TY++++ L G+
Sbjct: 245 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +R+LF +M E D++ +NSL++ K G+++E + EM+ +G PD +Y+
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ + F MK L PNV TY+ +I CK ++ A +L +M G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E++Y +++ +C + A +L+ M + V + TY +L L + GR A
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV+ SM K G P+ Y+ +VHG K + ++E+A K + M + I P
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAE-RMEDAMKILKQMTECNIKP 532
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI PS++ + ++ LCK ++ + + F + +P V TY+ L+ G G VG
Sbjct: 280 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 339
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E LF+EM + C DI+ +N L+ CK + A EM++ G +P+ +YS
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC+ + ++ M+R L+PN FTY +I CK + EA++LL++M++ G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A+L C + A + M K+ + P++ Y ++ ++ R + A
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTV 293
++ + M + P + Y ++ G C ++ KLEE E M GI P S+T+
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQR-KLEETKLILEEMKSRGISANPVISTTI 575
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++ L+ A CK ++ A + F D + P TY+ L+ G L+EA
Sbjct: 389 GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 448
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ML+ ++I+ + +LL+ +CKAG + EA + R M G P+ Y+ +H
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ +A + ++L M N+ P++ Y II C K+EE +L+EM RG + +
Sbjct: 509 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
I+ + + + AL M V TY +++ L + G + A + +
Sbjct: 569 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFC 628
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M G P+V+ Y+ ++ GLCK +E A K F+ M G+ P
Sbjct: 629 RMLSLGLQPNVAVYTSLIDGLCKNNC-IESAKKLFDEMQCRGMTP 672
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G P I + L++ CK + + A ++F K+ P V TYS L+ G
Sbjct: 350 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A KLF +M + + SL++A CKAGN+ EA +L +M G + + +Y+
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + V SM + + PN Y ++ K E++E+A ++L +M E
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y +I+ HC + ++ ++ M + + ++ + G+ A
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 589
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++ M+ G ++ TY V++ GLC K G +E A YF M+ G+ P Y+S ++
Sbjct: 590 NFFQEMQDVGVEATIVTYCVLIDGLC-KAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648
Query: 296 L 296
L
Sbjct: 649 L 649
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 43/333 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G+K +I LL LCK + A + F + K +P + Y+ LV G
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMC----------------------------- 90
+ +A K+ +M E D++ + S++ C
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 91 ------KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
KAG +A +EM+ +G E +Y + I C+A + M
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L PNV Y +I LCKN +E A +L DEM RG PD ++ A++ + + AL
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LI+RMT+ + D H Y ++ + G +A + + M ++G P V+ L
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE----EVLCICL 750
Query: 265 CK---KKGKLEEACKYFEMMVDEGIPPYSSTVE 294
+ K+G+L+EA + M G+ S+T++
Sbjct: 751 LREYYKRGQLDEAIELKNEMERMGLITESATMQ 783
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ +L ++G L EA + F M + + N LL + K+GN +M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G P F+Y++ I C+ D+ + R+ M+ L P+V TYN +I K +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EE L +EM + G PD +YN ++ +C ++ A + M + P+ TY+ +
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + G A +++ M + G P+ TY+ ++ C K G L EA K M+ G
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC-KAGNLTEAWKLLNDMLQAG 459
Query: 286 I 286
+
Sbjct: 460 V 460
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGEL 60
+FG+K S+ L+ LL+ L + + + H F N+K F TP + T ++LV+ L ++
Sbjct: 146 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 205
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+ DE+ +++ + ++L G+++ A +L EM G PDA +Y++
Sbjct: 206 ESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVL 265
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +C+ V+D M++ + PN TY +IR LCK +K EA + DEM++R
Sbjct: 266 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSF 325
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD ++ C+ +V+ A L +M K N MPD + ++ L + GR A +
Sbjct: 326 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARK 385
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ +K G PS+ TY+ ++ G+C +KG+L EA + ++ M + P + T +L
Sbjct: 386 LFDEFDK-GSIPSLLTYNTLIAGMC-EKGELTEAGRLWDDMFERKCKPNAFTYNVL 439
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 42/348 (12%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FGI P+I+ + L+ ALCK+ ++ A++ D P + TY+ ++ G G++
Sbjct: 183 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMES 242
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++ +EML+R D + + L++ CK G EA ++ +M EP+ +Y + I
Sbjct: 243 AKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 302
Query: 123 AFCE---ANDIHSVF----------------RVLDS----------------MKRYNLVP 147
A C+ + + ++F +V+D+ M + N +P
Sbjct: 303 ALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 362
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ + +I LCK +V EA +L DE ++G+ P +YN ++A C++ E+ A RL
Sbjct: 363 DNALLSTLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 421
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + P+ TYN++++ L + G V E M + G +P+ +T+ ++ GL +K
Sbjct: 422 DDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGL-QK 480
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG---LGFLDIIEIL 312
GK E+A K M V G S E+ N+ VG G L + E+L
Sbjct: 481 LGKEEDAIKIVSMAVMNGKVDKESW-ELFLNKFVGELDKGVLALKELL 527
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 2/272 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SI 108
L+R G G + ++F + + + + N+LL + + D H M + + S
Sbjct: 124 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 183
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P+ F+ ++ + A C+ NDI S ++VLD + LVPN+ TY I+ +E A
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++L+EM++RG PD +Y ++ +C + A ++ M K + P+ TY ++++
Sbjct: 244 KRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 303
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + + A +++ M R F P S ++ LC+ K++EAC + M+ P
Sbjct: 304 LCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDH-KVDEACGLWRKMLKNNCMP 362
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
++ + L + L G + L D+ ++ +
Sbjct: 363 DNALLSTLIHWLCKEGRVSEARKLFDEFDKGS 394
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P L+ CK A D+ K+E P TY +++R L +
Sbjct: 250 MLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 309
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EAR +FDEML+R D +++A+C+ +DEA G+ R+M PD S
Sbjct: 310 SGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 369
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + ++ D + + +P++ TYN +I +C+ ++ EA +L D+M ER
Sbjct: 370 LIHWLCKEGRVSEARKLFDEFDKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERK 428
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN ++ V +R++ M + P++ T+ ++ + L ++G+ + A
Sbjct: 429 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAI 488
Query: 240 EV 241
++
Sbjct: 489 KI 490
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 3/293 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
++ G KP + L+ + + K V+ F++ + + F P V++YSIL+ GL G+
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +F M ++ +D A+N++++ CK+G + +A+ +L EM+ +P +Y
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + + K + NV Y+ +I K +++EAY +L+EM+++G
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N++L E+N AL M + P+ +TY++++ L RV ++++A
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPPYSS 291
W+ M+K+G P+V TY+ M+ GL K G + +A FE + GIP +S
Sbjct: 625 VFWQDMQKQGLVPNVVTYTTMISGL-AKVGNITDAYSLFERFKANGGIPDAAS 676
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G+KP ++ LCK + A + F + E + P Y+ ++ G G G +A
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL + + ER C +++ NS+L + K +DEA + M+ AEP++ +Y+I I
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 263
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +R+LD M+ +L PN+ T N ++ +LCK K+EEAY++ + +RG NPD
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRM--------------------------------- 210
+Y +++ + +V+ A RL +M
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFK 383
Query: 211 --TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ PD N + + + G ++ ++E + GF P V +YS+++HGL K
Sbjct: 384 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL-TKA 442
Query: 269 GKLEEACKYFEMMVDEGI 286
G+ E F M +G
Sbjct: 443 GQARETSNIFHAMKQQGF 460
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M +P+ L+ AL + + + A + + + V ++ LVR L G+
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L DE+ DI+ +N ++ KAGN+D A E+++ G +PD SY+
Sbjct: 96 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTS 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A + + M+ VP + YN +I + E+AY+LL+ + ERG
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P S+N+IL + +V+ AL L M K++ P+ TYN+++ +L GR + A
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAY 274
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + ME +P++ T ++MV LCK + KLEEA K FE G P T L +
Sbjct: 275 RILDEMEHASLFPNLLTVNIMVDRLCKAR-KLEEAYKIFESASQRGCNPDCVTYCSLIDG 333
Query: 300 LVGLGFLDIIEILADKM 316
L G +D L +KM
Sbjct: 334 LGKKGQVDEAYRLFEKM 350
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G PS+ + +L L K++ V A F+ K + P TY+I++ L G + E
Sbjct: 213 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 272
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ DEM ++L N +++ +CKA ++EA+ + G PD +Y I
Sbjct: 273 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 332
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ + +R+ + M N Y +IR + + E+ +++ E+I RG P
Sbjct: 333 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKP 392
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D N + EV + + +PD +Y++++ L + G+ + ++
Sbjct: 393 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 452
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+M+++GF Y+ +V G C K GK+ +A + E M ++ + P +T + + L
Sbjct: 453 HAMKQQGFALDARAYNAVVDGFC-KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 511
Query: 303 LGFLD 307
+ LD
Sbjct: 512 IDRLD 516
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L A+ +A +D+A + MR + P +Y++ I A EA +L M+
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
V + ++R L + +V +A L+DE+ PD YN + V+MA
Sbjct: 76 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ + + + PD +Y ++ +L + GR A E++ ME P Y+ M+ G
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
G+ E+A K E + + G P
Sbjct: 196 -GSAGRFEDAYKLLERLRERGCIP 218
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + L+H LCK + A + + K F P V TY+I++ G +
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L +EM + ++ +N ++ A+CK G +DEA G+++EMRS G PD SY+ I+
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + +++ +V N TYN II L ++ + ++A +L EMI G + D
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ C V+ +L L+ M ++ + P+ +YN+++ L + R A E+ +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G P + TY+ +++GLC K G + A E + +E + P T +L
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLC-KMGWMHAALNLLEKLHNENVHPDIITYNIL 632
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P + LL LC+ + A V ++ ++ G G+L
Sbjct: 271 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL---NVVLFNTVIGGCLAEGKL 327
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EA +L++ M + C D ++ L+ +CK G I A +LREM G P+ +Y+I
Sbjct: 328 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIV 387
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H+FC+ +L+ M L N YN +I LCK+ +++EA L+ EM +G
Sbjct: 388 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 447
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
NPD SYN I+ + C+ ++ A + + +E V+ + TYN ++ L+R GR+ A
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVR 507
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M G V +Y+ ++ +C K G ++ + E M ++GI P + + +L + L
Sbjct: 508 LAKEMILHGCSLDVVSYNGLIKAMC-KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 7/285 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELS 61
FG++PS + +L L + A + H PT T+ + R L +G +
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAN 192
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA L M C D + + +++ A+C G + EA +L EM +G D ++ +
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + R++D M +P V TY +++ LC+ + +EA +L + E
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL--- 309
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ +N ++ ++ A L M + PD HTY++++ L ++GR A +
Sbjct: 310 -NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
MEK+GF P+V TY++++H C K G ++ E M +G+
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFC-KNGMWDDTRALLEEMSAKGL 412
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P I + +++ LC + ++ A F+N E TY+ ++ L G +A
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM+ C +D++++N L++AMCK GN+D + +L EM G +P+ SY+I I
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M L P++ TYN +I LCK + A LL+++ +PD
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625
Query: 184 EWSYNAILAYHCDRAEVNMALRLITR 209
+YN ++++HC ++ A L+ R
Sbjct: 626 IITYNILISWHCKVRLLDDAAMLLNR 651
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ +++ALCK + A + + P + +Y+ ++ L + ++ EA +F+ +LE
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ + +N+++ A+ + G +A + +EM G D SY+ I A C+ ++
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+L+ M + PN +YN +I +LCK +V +A +L +M+ +G PD +YN ++
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
C ++ AL L+ ++ ENV PD TYN+++ +V D A
Sbjct: 600 GLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
++N +L + +A +A + R M P F++ + A C + +L
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRG 200
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M R+ VP+ Y +I LC V EA LL+EM+ G D +++ ++ C
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V A RL+ RM + MP TY +L+ L RV + D A +M R +V ++
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNT 316
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ G C +GKL EA + +E M +G P + T +L + L LG + L +ME+
Sbjct: 317 VIGG-CLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 158/326 (48%), Gaps = 37/326 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
KP++ ++ ALCK + V A+ F + V TYS L+ G G+L EA
Sbjct: 196 KPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------------- 102
L +EM+ + ++ +N L++A+CK G + EA +L
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 103 ------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
M +G PD +Y+I I+ FC+ + + M + N+VP +
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY+ +I LCK+ ++ + L+DEM +RG + +Y++++ C ++ A+ L +M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + P+ T+ ++L L + GR A EV++ + +G++ +V TY+VM+ G C K+G
Sbjct: 436 KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHC-KQGL 494
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
LEEA M D G P + T E++
Sbjct: 495 LEEALTMLSKMEDNGCIPDAVTFEII 520
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ L+ LC + VK A F D F +Y L+ G+ +G+ A
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 183
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ R +++ ++++++A+CK + EA+G+ EM G D +YS I+
Sbjct: 184 IKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +L+ M + PNV+TYN ++ LCK KV+EA +L M++ PD
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ + EV A + M+ V PD HTY +++ + D A +++
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++ P + TYS ++ GLC K G++ + M D G P T L + L
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLC-KSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKN 422
Query: 304 GFLDIIEILADKME 317
G LD L +KM+
Sbjct: 423 GHLDRAIALFNKMK 436
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 160/332 (48%), Gaps = 6/332 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P + L+ L++ C + K + P T + L++GL G++ +A
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L + ++ +++ +L+ +CK G+ A +L+++ +P+ YS I A
Sbjct: 149 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDA 208
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + +V TY+ +I C K++EA LL+EM+ + NP+
Sbjct: 209 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPN 268
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ C +V A ++ M K V PD TY+ ++ V +A V+
Sbjct: 269 VYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M G P V TY+++++G CK K ++EA F+ M + + P T L + L
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNK-MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 304 GFL----DIIEILADKMERSTSCTIQELANAM 331
G + D+I+ + D+ + + T L + +
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 47/299 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------------------------- 33
MV I P++Y + L+ ALCK VK A
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 34 -DNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
A+H F TP V TY+IL+ G + EA LF EM ++ I+ ++S
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ +CK+G I ++ EM G + +YS I C+ + + + MK
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN FT+ ++ LCK ++++A ++ +++ +G + + ++YN ++ HC + + AL
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVR-------VGRFDRATEVWESME-KRGFYPSVS 255
++++M +PD T+ +++ L + VG FD+ +VWE +E K+G PS++
Sbjct: 500 TMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVG-FDK--KVWEIVEHKKGETPSIT 555
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 114/228 (50%), Gaps = 2/228 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + T +IL+ +G+++ + ++L+R D + +L+ +C G +++A
Sbjct: 959 PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++ + G + + SY I+ C+ D + ++L + P+V YN II LCK
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ V +AY L EM +G + D +YN ++ C ++ A+ L+ +M + + P+ T
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138
Query: 222 YNMVLKLLVRVGR--FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
YN+++ L + G+ D + + ME G + T+ +++ L +K
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEK 1186
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 43/285 (15%)
Query: 8 PSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
P I +++L + K KH V ++H+ P + T +IL+ +G+++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRL---ELKGIQPDLITLNILINCFCHMGQITFG 113
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++L+R P D + N+L++ +C G + +A ++ + G + + SY I+
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLING 173
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D + ++L + PNV Y+ II LCK + V EAY L EM +G + D
Sbjct: 174 VCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 233
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ C ++ A+ L+ M VLK +
Sbjct: 234 VVTYSTLIYGFCIEGKLKEAIGLLNEM--------------VLKTI-------------- 265
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V TY+++V LC K+GK++EA +M+ + P
Sbjct: 266 -------NPNVYTYNILVDALC-KEGKVKEAKSVLAVMLKACVKP 302
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 120/249 (48%), Gaps = 3/249 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ L+ L++ C + K + P T++ L+ GL G++++A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L + ++ +++ +L+ +CK G+ A +LR++ +PD Y+ I A
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + +V TYN +I C K++EA LL++M+ + NP+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
Query: 184 EWSYNAILAYHCDRAE--VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+YN ++ C + ++ +L ++++M + T+ +++ L D+ ++
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195
Query: 242 WESMEKRGF 250
M RG
Sbjct: 1196 LHEMIARGL 1204
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + +A F+ ML + I+ N +L++ K + A + + G +PD +
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+I I+ FC I F VL + + P+ T N +I+ LC +V++A D+++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G ++ SY ++ C + A++L+ ++ P+ Y+ ++ L +
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ M +G V TYS +++G C +GKL+EA MV + I P T +L
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFC-IEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 297 RNRL 300
+ L
Sbjct: 276 VDAL 279
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 12/244 (4%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G +PD F+ +I I+ FC I F +L + + P+ T+ +I LC +V +A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
D+++ +G ++ SY ++ C + A++L+ ++ PD YN ++
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + +A ++ M +G V TY+ +++G C GKL+EA MV + I P
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC-IVGKLKEAIGLLNKMVLKTINP 1134
Query: 289 YSSTVEMLRNRLV--GLGFLDIIEILADKME----RSTSCTIQELANAMRGKTGFRKSRS 342
T +L + L G LD + KME ++ + T + + +A+ F K +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL-----FEKDEN 1189
Query: 343 EETE 346
++ E
Sbjct: 1190 DKVE 1193
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ L R+ + + PD T N+++ +G+ + + KRG++P T++ +++
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
GLC KG++ +A + + ++ +G + L N + +G
Sbjct: 1005 GLC-LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG 1045
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 44/89 (49%)
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G PD ++ N ++ C ++ ++ ++ K PD T+ ++ L G+ ++
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
A + + +GF + +Y +++G+CK
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCK 1043
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 161/314 (51%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G + + LL AL + K A + FD + ++TP +++Y+ L+ + L EA
Sbjct: 302 GFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLRSYTALMLAWCNARNLVEAG 361
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+++++MLE+ D++ HN++++ + + EA M M++ G P+ ++Y++ I
Sbjct: 362 RVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDH 421
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + R + M+ P V TY C++ ++++ +L+EM ++G PD
Sbjct: 422 CKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDG 481
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-FDRATEVWE 243
+YNA++ +R + A+R+ +M + + P HTYNM++K GR + VWE
Sbjct: 482 RTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWE 541
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++G P V++Y+V ++G + G+ EACK+ E M+ +G+
Sbjct: 542 EMHRKGICPDVNSYTVFINGHI-RHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKA 600
Query: 304 GFLDIIEILADKME 317
G DI+ LA K++
Sbjct: 601 GKPDILYELAQKVK 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 16/246 (6%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEP-DAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+L + KA + +++EM GA DAF I I +F A +I + V + M+ +
Sbjct: 244 MLHILGKARQFETMVALVQEMGKAGALCMDAFK--IAIKSFAAAGEIKNAVGVFEMMRVH 301
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
V ++NC++ L + +EA ++ D M ++ PD SY A++ C+ + A
Sbjct: 302 GFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALMLAWCNARNLVEA 360
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
R+ M ++ + PD +N ++ L+R R A +++E M+ +G P+V TY++++
Sbjct: 361 GRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRD 420
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
C K+GKL+ A + FE M G P +T L LVG G A +M+R T+
Sbjct: 421 HC-KQGKLDMAMRCFEEMQVAGCQPEVATYTCL---LVGYGN-------AKRMDRVTA-M 468
Query: 324 IQELAN 329
++E+A
Sbjct: 469 LEEMAQ 474
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 2/253 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M+E G+KP + + ++ L + + A + F+ K + P V TY++L+R G+
Sbjct: 367 MLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGK 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + F+EM C ++ + LL A +D ML EM G PD +Y+
Sbjct: 427 LDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNA 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I N R+ M L P + TYN +++ + +EM +
Sbjct: 487 LIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRK 546
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD SY + H A + + M ++ + + YN + G+ D
Sbjct: 547 GICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDIL 606
Query: 239 TEVWESMEKRGFY 251
E+ + ++ G +
Sbjct: 607 YELAQKVKFTGKF 619
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 19/299 (6%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ +LCK K V A++ + + +P V T+S L+ G VG+ EA LF EM+
Sbjct: 194 IIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTN 253
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHG----MLREMRSIG-------------AEPDAFSY 117
D+ N L++A+CK G+ E M++E+ + PD SY
Sbjct: 254 INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSY 313
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I C+ + + + M+ + P+ TY+ +I LCK+E++ A++LLD+M
Sbjct: 314 TIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHA 373
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG D +Y + L C +V+ A+ L+ ++ + + P+ +TYN+++ L + GRF+
Sbjct: 374 RGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFEN 433
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A +++ + +G+ +V TY++M++GLC +G +EA E M D G P T E +
Sbjct: 434 AQVIFQDLLIKGYKVTVWTYNIMINGLC-LEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 18/268 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF----------DNAKHEF--------TP 42
MV I P + + L+ ALCK K + AKH F TP
Sbjct: 249 MVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTP 308
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
V +Y+I+++ L + + EA LF+EM + D + ++SL++ +CK+ I A +L
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELL 368
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+M + G D +Y+ F+HA C+ + + ++ +K + PN+ TYN +I LCK
Sbjct: 369 DQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKE 428
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E A + +++ +G W+YN ++ C + A+ L+ +M PD TY
Sbjct: 429 GRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTY 488
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGF 250
+++ L + +A ++ M RG
Sbjct: 489 ETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 153/323 (47%), Gaps = 31/323 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH------VKVAHQFFDNAKHEFTPTVKTYSILVRGL 54
M+ PSI + +++L +L K + + + H+ NA TP++ T++ ++
Sbjct: 37 MLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNA---ITPSIVTFNTVINCY 93
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
+GE+ A + ++L+ D + +L++ +C G + EA + + G +
Sbjct: 94 CHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNE 153
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
SY I I+ C+ + + +VL + + NV Y+ II LCK + V EAY+L +
Sbjct: 154 VSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQ 213
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR--- 231
MI + +PD +++A++ C + A L M N+ PD T+N+++ L +
Sbjct: 214 MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGS 273
Query: 232 --------------VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
V + ++A V+ + KR P V +Y++++ LCK K ++EA
Sbjct: 274 TKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIK-MVDEALSL 332
Query: 278 FEMMVDEGIPP----YSSTVEML 296
F M +GI P YSS ++ L
Sbjct: 333 FNEMRCKGITPDKVTYSSLIDGL 355
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P ++ ++ LCK K V A F+ + + TP TYS L+ GL +S A
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAW 365
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L D+M R P D++ + S L A+CK +D+A ++++++ G +P+ +Y+I I
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + + V+TYN +I LC +EA LL++M + G PD
Sbjct: 426 CKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDV 485
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+Y I+ E + A +L+ M ++ ++
Sbjct: 486 VTYETIIRALFKNDENHKAEKLLREMIARGLLEEK 520
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK--NEKVEEAYQLLDEMIERGANPDEWS 186
D+H M R N P++ +N I+ L K N A L + P +
Sbjct: 26 DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N ++ +C E++ A ++ ++ K PD T ++K L G+ A + +
Sbjct: 86 FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145
Query: 247 KRGFYPSVSTYSVMVHGLCK---KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
RGF + +Y ++++GLCK + L+ K +V+ + YS+ ++ L
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSL 198
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 161/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V G +P++ L+H LCK +H+ A + F+ + P V TY+ LV GL ++G
Sbjct: 178 IVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGR 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A L +M++R +++ +L++A K G I EA + + M + PD F+Y+
Sbjct: 238 WSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTA 297
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + ++ M+ PN TY +I CK+++VE+ ++ EM ++G
Sbjct: 298 LINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKG 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y ++ +C ++A + +M PD TYN++L L G ++A
Sbjct: 358 LVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKAL 417
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M KR ++ TY++++ G+CK GK+E+A F + +G+ P T + +
Sbjct: 418 MIFKYMRKREMDINIVTYTIIIQGMCKV-GKVEDAFDLFCSLFSKGMKPNVITYTTMISG 476
Query: 300 LVGLGFLDIIEILADKME 317
GF+ + L KM+
Sbjct: 477 FCRRGFIHEADALFKKMK 494
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + GI+P++ + L+ LC+ + A D K P V T++ L+ VG+
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGK 272
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++L+ M++ D+ + +L+ +C G +DEA M M S G P+ +Y+
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH FC++ + ++ M + LV N TY +I+ C + + A ++ ++M R
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
A PD +YN +L C V AL + M K + + TY ++++ + +VG+ + A
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+++ S+ +G P+V TY+ M+ G C ++G + EA F+ M ++G P S
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGFC-RRGFIHEADALFKKMKEDGFLPNESV 504
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 150/299 (50%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P + LLH C ++ A FD F P V TY+ L+ L
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A ++F++M + +++ +NSL+ +C+ G +A +LR+M G +P+ +++
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + I + M + ++ P+VFTY +I LC +++EA Q+ M G
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG 322
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +Y ++ C V ++ M+++ ++ + TY ++++ VGR D A
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQ 382
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM----VDEGIPPYSSTVE 294
EV+ M R P + TY+V++ GLC G +E+A F+ M +D I Y+ ++
Sbjct: 383 EVFNQMGSRRAPPDIRTYNVLLDGLC-YNGYVEKALMIFKYMRKREMDINIVTYTIIIQ 440
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 151/310 (48%), Gaps = 2/310 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL + K K V F+ + +P + T +I++ + + A
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ D++ SLL C I++A + ++ +G P+ +Y+ IH C+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ + + M + PNV TYN ++ LC+ + +A LL +M++RG P+ +
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ ++ A L M + +V PD TY ++ L GR D A +++ ME
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
G+YP+ TY+ ++HG CK K ++E+ K F M +G+ + T +L +G
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSK-RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378
Query: 307 DIIEILADKM 316
D+ + + ++M
Sbjct: 379 DVAQEVFNQM 388
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 2/259 (0%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL ++ + +EA LF M+ + I+ LL + K D + +M+ +
Sbjct: 53 ILRNGLHNL-QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P ++ +I ++ C ++ L M + P++ T+ ++ C ++E+A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L D+++ G P+ +Y ++ C +N A+ + +M + P+ TYN ++
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L +GR+ A + M KRG P+V T++ ++ K GK+ EA + +++M+ + P
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFV-KVGKIMEAKELYKVMIQMSVYP 290
Query: 289 YSSTVEMLRNRLVGLGFLD 307
T L N L G LD
Sbjct: 291 DVFTYTALINGLCTYGRLD 309
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 7/185 (3%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y I+R N + EA L M+ P + +L+ ++ + L +M
Sbjct: 50 YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ P +T N+V+ + R + RA+ M K GF P + T++ ++HG C ++
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWN-RI 168
Query: 272 EEACKYFEMMVDEGIPP----YSSTVEML-RNRLVGLGFLDIIEILADKMERSTSCTIQE 326
E+A F+ +V G P Y++ + L +NR + ++I + D R T
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHA-VEIFNQMGDNGIRPNVVTYNS 227
Query: 327 LANAM 331
L + +
Sbjct: 228 LVSGL 232
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y IL + N AL L TRM +P + +L ++ ++ RFD ++E M
Sbjct: 49 NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ G P + T +++++ +C+ +C +MM
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M FG P++ + +++ LCK + + A + F+ K TY+ L+ GL + G
Sbjct: 700 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +L +M++RK +++ +L++ K GN+ EA + +EM P+ F+Y+
Sbjct: 760 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + + D M P+V TYN +I CK+++VE+ +L EM +G
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN ++ +C ++N+A ++ RM V PD TYN++L L G+ ++A
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ E ++K + TY++++ GLC+ KL+EA F + +G+ P
Sbjct: 940 VMVEDLQKSEMDVDIITYNIIIQGLCRTD-KLKEAWCLFRSLTRKGVKP 987
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G +P++ + L+ LCK + +A + + K V TY+ L+ GL G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A ++ +M++R D++ +L++ K GN+DEA + +EM +P+ +Y+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C ++ + D M PNV TYN +I CK V+E +L M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D ++YN ++ +C ++ +AL + M V PD T+ ++L L G + A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + Y + Y++M+HGLCK K+E+A + F + EG+ P + T ++
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKAD-KVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI LLH C + A K + P V Y+ L+ GL GE
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +L +EM ++ D++ +N+LL +C +G +A MLR+M PD +++
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M + ++ PN TYN II LC + ++ +A + D M +G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C V+ ++L RM+ E D TYN ++ +VG+ A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE----GIPPYSSTVEM 295
+++ M R P + T+ +++HGLC G++E A F+ M + GI Y+ +
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLC-VNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 296 L 296
L
Sbjct: 431 L 431
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 2/286 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
+GI +Y L+H C+ + A K + P++ T+ L+ G V + +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L M++ +++ +N+L++ +CK G ++ A +L EM G D +Y+ +
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + R+L M + ++ P+V T+ +I K ++EA +L EMI+ +P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN+I+ C + A + M + P+ TYN ++ + D +++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M GF + TY+ ++HG C + GKL A F MV + P
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYC-QVGKLRVALDIFCWMVSRRVTP 384
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 1/258 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P++ L+ K ++ A + + + P V TY+ L+ G G
Sbjct: 770 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 829
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+ +FD M+ + C D++ +N+L+ CK+ +++ + EM G DAF+Y+
Sbjct: 830 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH +C+A ++ +V + M + P++ TYN ++ LC N K+E+A +++++ +
Sbjct: 890 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 949
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN I+ C ++ A L +T++ V PD Y ++ L R G A
Sbjct: 950 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 1009
Query: 240 EVWESMEKRGFYPSVSTY 257
++ M++ GF PS Y
Sbjct: 1010 KLCRRMKEDGFMPSERIY 1027
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
FF+ + P++ ++ L+ ++ +M D+ + L+ C+
Sbjct: 59 FFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCR 118
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EP ++ +H FC N I F ++ M + PNV
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCKN ++ A +LL+EM ++G D +YN +L C + A R++ M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K ++ PD T+ ++ + V+ G D A E+++ M + P+ TY+ +++GLC G+L
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC-MHGRL 297
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A K F++M +G P T L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL A + + F + + + + +++IL+ LS A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SLL C I +A ++ M G EP+ Y+ I C+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ +L+ M++ L +V TYN ++ LC + + +A ++L +M++R NPD +
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + ++ A L M + +V P+ TYN ++ L GR A + ++ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+G +P+V TY+ ++ G CK + ++E K F+ M EG
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFR-MVDEGMKLFQRMSCEG 346
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI +Y L+H C+ + +A K F P++ T L+ G
Sbjct: 630 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 689
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L D M +++ +N+++ +CK +++ A + M G DA +Y+
Sbjct: 690 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + R+L M + + PNV + +I K + EA L EMI R
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN+++ C + A + M + PD TYN ++ + R +
Sbjct: 810 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G TY+ ++HG C+ GKL A K F MVD G+ P T +L +
Sbjct: 870 KLFCEMTYQGLVGDAFTYNTLIHGYCQA-GKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 928
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ ++ + +++S
Sbjct: 929 LCNNGKIEKALVMVEDLQKS 948
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M+ + P+++ + L++ C + A FD +K F P V TY+ L+ G
Sbjct: 805 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSK 863
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ + KLF EM + D +N+L+ C+AG ++ A + M G PD +Y+
Sbjct: 864 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 923
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + C I +++ +++ + ++ TYN II+ LC+ +K++EA+ L + +
Sbjct: 924 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 983
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G PD +Y +++ C + A +L RM ++ MP Y+ L+
Sbjct: 984 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A LF EM+ + I+ LL A + ++M G D +S++I I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H FC + + VL M + P++ T+ ++ C ++ +A+ L+ M++ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ YN ++ C E+N+AL L+ M K+ + D TYN +L L GR+ A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M KR P V T++ ++ K+G L+EA + ++ M+ + P + T + N L
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFV-KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ ++ + + + L+ +M D+ + L+ C+ + A +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G P + ++ FC+ N ++DSM + VPNV YN +I LCK
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N + A ++ M ++G D +YN +++ + A RL+ M K + P+
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ V+ G A +++ M +R P+V TY+ +++G C G L +A F++M
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYMFDLM 840
Query: 282 VDEGIPPYSSTVEML 296
V +G P T L
Sbjct: 841 VSKGCFPDVVTYNTL 855
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D ++L + K + + ++ + + +++IL+ LS A L
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SLL C+ EA ++ M G P+ Y+ I+ C+
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D+++ V M++ + + TYN +I L + + +A +LL +M++R +P+
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + A L M + +V+P+ TYN ++ G A +++ M
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G +P V TY+ ++ G CK K ++E+ K F M +G+ + T L + G L
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900
Query: 307 DIIEILADKM 316
++ + + ++M
Sbjct: 901 NVAQKVFNRM 910
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P+ + +++ LC + A + FD A P V TY+ L+ G
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KLF M DI +N+L+ C+ G + A + M S PD ++ I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C +I S D M+ + YN +I LCK +KVE+A++L + G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PD +Y ++ C A LI RM +E ++
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + L+ CK K V+ + F ++ TY+ L+ G G+
Sbjct: 840 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+K+F+ M++ DI+ +N LL+ +C G I++A M+ +++ + D +Y+I
Sbjct: 900 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + + S+ R + P+ Y +I LC+ EA +L M E G
Sbjct: 960 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Query: 180 ANPDEWSYNAILAYH 194
P E Y+ L H
Sbjct: 1020 FMPSERIYDETLRDH 1034
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
++A + EM P ++ + A +V M+ Y + +++++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I C+ ++ A +L +M++ G P ++ ++L C + A L+ M K
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P+ YN ++ L + G + A E+ MEK+G V TY+ ++ GLC G+ +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC-YSGRWSDAA 231
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
+ M+ I P T L + V G LD + L +M +S+
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 12/220 (5%)
Query: 109 GAEPDAFS------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
GA AFS + F+H+ F + M +P++ + ++
Sbjct: 29 GAAARAFSDYREKLRTGFLHSI----RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANL 84
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E +M G + D +S+ ++ C + ++ AL ++ +M K P T+
Sbjct: 85 RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+L V R A + M K G+ P+V Y+ ++ GLC K G+L A + M
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC-KNGELNIALELLNEME 203
Query: 283 DEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
+G+ T L L G + D +L D M+RS +
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDV 57
M E G P ++ LL LC K + A + + P V +YS ++ G
Sbjct: 75 MPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKE 134
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ +A LF +ML+ P +++ NS+++ +CK +D+A +L++M P+ +Y
Sbjct: 135 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 194
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IH + + R+L M R PNV TYN +I LCK+ EA ++ + MI+
Sbjct: 195 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQ 254
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD +Y ++L + + + M + + + HT+++ + + GR D
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A+ + M++ GF P + TY+ ++ GLC K G+L++A F M+D+G+ P
Sbjct: 315 ASLTFIKMQQLGFMPDIVTYTTVIDGLC-KIGRLDDAMSRFCQMIDDGLSP 364
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 149/341 (43%), Gaps = 37/341 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI P++ + ++ LCK + + A E P TY+ L+ G G+
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 206
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-- 117
+EA ++ EM +++ +N L++ +CK+G EA + M G +PDA +Y
Sbjct: 207 WTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGS 266
Query: 118 ---------------------------------SIFIHAFCEANDIHSVFRVLDSMKRYN 144
SI I+A+C+ + M++
Sbjct: 267 LLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLG 326
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+P++ TY +I LCK ++++A +MI+ G +P+ ++ ++ + A
Sbjct: 327 FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAE 386
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + PD + ++ L + G+ A ++++ M + G P+V +Y+ M+HG
Sbjct: 387 ELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGY 446
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
G++ E K + M+ G+ P + T L + +V +G
Sbjct: 447 -FIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGL 486
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMC-KAGNIDEAHG 100
P + T+ IL+ D G L+ ++++ D +A LL +C K D +
Sbjct: 11 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR--YNLVPNVFTYNCIIRK 158
+LR M +G PD FSYS + C ++ M N P+V +Y+ +I
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
K V +AY L +M++ G P+ + N+++ C ++ A ++ +M E++MP+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
TYN ++ + G++ A + + M + G P+V TY++++ LC K G EA + F
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLC-KSGFHAEAREIF 249
Query: 279 EMMVDEGIPPYSST 292
M+ G P ++T
Sbjct: 250 NSMIQSGPKPDATT 263
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 4/236 (1%)
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+K DI L+ C AG ++ L ++ G DA +++ + C
Sbjct: 7 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66
Query: 133 VFR-VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNA 189
VL M P+VF+Y+ +++ LC +K EEA +L+ M E G N PD SY+
Sbjct: 67 AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ +V A L +M + P+ T N V+ L +V D+A V + M
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
P+ +TY+ ++HG G+ EA + + M +G P T ML + L GF
Sbjct: 187 IMPNCTTYNSLIHGYL-SSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGF 241
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 17/227 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I ++ LCK + A +F +P + T++ L+ G G+
Sbjct: 322 MQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGK 381
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF EM++R P D+ ++++ + K G + EA + M GA+P+ SY+
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + A ++ V ++LD M L P T+N LLD M+ G
Sbjct: 442 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFN----------------TLLDGMVSMG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
PD + ++ C+ + L L M + D T N+ L
Sbjct: 486 LKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M FG P++ + +++ LCK + + A + F+ K TY+ L+ GL + G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +L +M++RK +++ +L++ K GN+ EA + +EM P+ F+Y+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + + D M P+V TYN +I CK+++VE+ +L EM +G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN ++ +C ++N+A ++ RM V PD TYN++L L G+ ++A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ E ++K + TY++++ GLC+ KL+EA F + +G+ P
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTD-KLKEAWCLFRSLTRKGVKP 462
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 1/258 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P++ L+ K ++ A + + + P V TY+ L+ G G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+ +FD M+ + C D++ +N+L+ CK+ +++ + EM G DAF+Y+
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH +C+A ++ +V + M + P++ TYN ++ LC N K+E+A +++++ +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN I+ C ++ A L +T++ V PD Y ++ L R G A
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 240 EVWESMEKRGFYPSVSTY 257
++ M++ GF PS Y
Sbjct: 485 KLCRRMKEDGFMPSERIY 502
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI +Y L+H C+ + +A K F P++ T L+ G
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L D M +++ +N+++ +CK +++ A + M G DA +Y+
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + R+L M + + PNV + +I K + EA L EMI R
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN+++ C + A + M + PD TYN ++ + R +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G TY+ ++HG C+ GKL A K F MVD G+ P T +L +
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQA-GKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ ++ + +++S
Sbjct: 404 LCNNGKIEKALVMVEDLQKS 423
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M+ + P+++ + L++ C + A FD +K F P V TY+ L+ G
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSK 338
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ + KLF EM + D +N+L+ C+AG ++ A + M G PD +Y+
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + C I +++ +++ + ++ TYN II+ LC+ +K++EA+ L + +
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G PD +Y +++ C + A +L RM ++ MP Y+ L+
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ ++ + + + L+ +M D+ + L+ C+ + A +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G P + ++ FC+ N ++DSM + VPNV YN +I LCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N + A ++ M ++G D +YN +++ + A RL+ M K + P+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ V+ G A +++ M +R P+V TY+ +++G C G L +A F++M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYMFDLM 315
Query: 282 VDEGIPPYSSTVEML 296
V +G P T L
Sbjct: 316 VSKGCFPDVVTYNTL 330
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D ++L + K + + ++ + + +++IL+ LS A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SLL C+ EA ++ M G P+ Y+ I+ C+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D+++ V M++ + + TYN +I L + + +A +LL +M++R +P+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + A L M + +V+P+ TYN ++ G A +++ M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G +P V TY+ ++ G CK K ++E+ K F M +G+ + T L + G L
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 307 DIIEILADKM 316
++ + + ++M
Sbjct: 376 NVAQKVFNRM 385
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + L+ CK K V+ + F ++ TY+ L+ G G+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+K+F+ M++ DI+ +N LL+ +C G I++A M+ +++ + D +Y+I
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + + S+ R + P+ Y +I LC+ EA +L M E G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 180 ANPDEWSYNAILAYH 194
P E Y+ L H
Sbjct: 495 FMPSERIYDETLRDH 509
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 161/318 (50%), Gaps = 5/318 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P + L+ +LC+ VK A Q D + P V TY++L+ + G + EA
Sbjct: 213 GIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEA 272
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSYSIFI 121
L + MLE+ +D + +N+L+ + +DEA G+L EM EP+ +++ I
Sbjct: 273 MSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVI 332
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ + F+V D M N+ T+N +I L + KV++A +L+DEM G
Sbjct: 333 HGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLE 392
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++Y+ ++ C +V+ A L+++M ++ + P+ Y +L L G ++A
Sbjct: 393 PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNF 452
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
++ M K V YS M+HG C+ + + + A ++ + M+DEG+ P S T ML N
Sbjct: 453 FDEMHKNCKL-DVVAYSTMIHGACRLRDR-KSAEEFLKHMLDEGLIPDSVTYSMLINMFA 510
Query: 302 GLGFLDIIEILADKMERS 319
G L E + +M S
Sbjct: 511 NSGDLGAAERVLKQMTAS 528
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 145/284 (51%), Gaps = 7/284 (2%)
Query: 8 PSIYDL---DQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
PS+ D + +L ALC++ A F HE PT +Y+ L+R L +A
Sbjct: 73 PSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQA 132
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M D++ + +L+ +C A ++D+A +LREM G EP+ YS +
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A V +V + M + P+V Y +I LC+ KV++A Q++D+M+ERG P+
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C V A+ L M ++ V D TYN ++ L V D A + E
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312
Query: 244 SM--EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M + P+V T++ ++HGLC K G++ +A + +MM + G
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLC-KTGRMRQAFQVRDMMAENG 355
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 162/373 (43%), Gaps = 44/373 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M+E G++P++ + L++++CK VK A +N + TY+ L+ GL V E
Sbjct: 244 MMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLE 303
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAH------------------ 99
+ EA L +EM+ + V +++ NS++ +CK G + +A
Sbjct: 304 MDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTF 363
Query: 100 -----GMLR------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
G+LR EM S G EPD+F+YSI I+ FC+ + +L M+R
Sbjct: 364 NLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRR 423
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ P + Y ++ LC+ +E+A DEM + D +Y+ ++ C +
Sbjct: 424 DGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKS 482
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A + M E ++PD TY+M++ + G A V + M GF P V+ + ++
Sbjct: 483 AEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIK 542
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV----GLGFLDIIEILADKMER 318
G KG E+ + M + I S + + LV G L + ++ +
Sbjct: 543 GY-GAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSK 601
Query: 319 STSCTIQELANAM 331
+ EL N +
Sbjct: 602 GAVISSHELTNML 614
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
+ S+ + DA SY+ + A C L + + P +Y ++R LC +
Sbjct: 69 LSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERR 128
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+A LL +M G PD +Y ++ CD A+V+ A+ L+ M + + P+ Y+
Sbjct: 129 TGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSC 188
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+L+ + GR++ ++V+E M RG P V Y+ ++ LC ++GK+++A + + M++
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC-REGKVKKATQVMDKMMER 247
Query: 285 GIPPYSSTVEMLRNRL 300
G+ P T +L N +
Sbjct: 248 GLEPNVVTYNVLINSM 263
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 39/232 (16%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI+P + LL ALC++ ++ A FFD
Sbjct: 425 GIEPELVHYIPLLAALCEQGMMEQARNFFDE----------------------------- 455
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ + C +D++A+++++ C+ + A L+ M G PD+ +YS+ I+ F
Sbjct: 456 ------MHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD- 183
+ D+ + RVL M VP+V ++ +I+ E+ +L+ EM + D
Sbjct: 510 ANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDS 569
Query: 184 ---EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
Y ++A + +A + T ++K V+ NM+ KL +V
Sbjct: 570 KIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLCNKV 621
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 40/322 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA------------------------ 36
MV+ G++P + LL+ALCK ++++A ++F+
Sbjct: 151 MVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDE 210
Query: 37 --------KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA-HNSLLE 87
KH P TY++++ GL G+++EA ++ EM PV LA + S++
Sbjct: 211 ACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM-----PVPTLANYTSVIG 265
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
CKAG++ +A+ +L +M+ G + D +Y+ IH C +I + +L+ MK + VP
Sbjct: 266 GHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVP 325
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEM-IERGANPDEWSYNAILAYHCDRAEVNMALRL 206
++FTY+ +I LC+ +++ EA LL + E P+ SYN ++ A VN A +L
Sbjct: 326 DIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQL 385
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M PD TY+ +++ L GR A E M + P V YS ++ GLC
Sbjct: 386 FLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLC- 444
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
+ G+L+ A F+ MV G P
Sbjct: 445 RAGELDAASTVFDSMVANGCQP 466
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 13/326 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARK 65
P I+ D L+ LC+ K + A ++E TP V +Y+ L+ G +++A +
Sbjct: 325 PDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQ 384
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF EM+ D++ +++L+ +C AG EAH L EM P YS I C
Sbjct: 385 LFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLC 444
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A ++ + V DSM PN+ YN +I LCK ++ +A + EM ERG +PD
Sbjct: 445 RAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGV 504
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ C + + A L R ++ + + N+V+ L R ++A V +
Sbjct: 505 TYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL-RC--LEQAQRVLRVV 561
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL----- 300
G P+ Y+ ++ LCK+ L EA + E M+ GI P STV+ L +
Sbjct: 562 LATGNSPTAFFYATVIESLCKEN-NLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDK 620
Query: 301 --VGLGFLDIIEILADKMERSTSCTI 324
V + FL+ + L K T T+
Sbjct: 621 AVVAMAFLEEMVRLGSKPSVGTYSTL 646
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 17/282 (6%)
Query: 1 MVEFGIKPSIYDLDQLLH-------ALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVR 52
MV FG + D +H AL + + A++ F + E P TY IL+R
Sbjct: 74 MVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIR 133
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
GL + G+L A L++EM++R +L LL A+CK+GN++ A +M SI P
Sbjct: 134 GLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---P 190
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
A +++I I A + + MK + +PN +TY +I L K KV EA ++L
Sbjct: 191 CAATWTILIDGLFRAIRVDEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAERVL 249
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
EM P +Y +++ HC ++ A L+ M ++ D TYN ++ R+
Sbjct: 250 QEM----PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRL 305
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
DRA E+ E M+ F P + TY +++ GLC+ K +L EA
Sbjct: 306 QEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAK-RLSEA 346
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 33/271 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P + L+ LC AH + + + P V YS ++ GL GE
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +FD M+ C ++ +NSL+ +CK G + +A ++EM G PD +Y
Sbjct: 449 LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGT 508
Query: 120 FIHAFC------EANDIH-------------------SVFRVLDSMKRYNLV-------P 147
I C EA D++ + R L+ +R V P
Sbjct: 509 LIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSP 568
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
F Y +I LCK + EA QLL++MI G PD + +A++ C + + +A+ +
Sbjct: 569 TAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFL 628
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
M + P TY+ +L L + G+ A
Sbjct: 629 EEMVRLGSKPSVGTYSTLLNALFKAGKPSEA 659
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 147/369 (39%), Gaps = 71/369 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV I P + ++ LC+ + A FD+ + P + Y+ L+ GL G
Sbjct: 424 MVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGR 483
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
L +A+ EM ER C D + + +L+ +C+ DEA
Sbjct: 484 LCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNV 543
Query: 99 -----------HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
+LR + + G P AF Y+ I + C+ N++ ++L+ M + P
Sbjct: 544 VIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKP 603
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN-------------------------- 181
+ T + ++ +C+ +K A L+EM+ G+
Sbjct: 604 DGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVL 663
Query: 182 ----------PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
PDE Y ++A + ++ +V A ++ + + + YN +LK L R
Sbjct: 664 RRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFR 723
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
E+ M++ F + +T+++++ G C + G+ + A + M + + P ++
Sbjct: 724 TRNLQMVYELLREMKRNEFVVNEATFNILIQGFC-RLGQTDRAVRVLSEM-KKVLTPSAA 781
Query: 292 TVEMLRNRL 300
++ L + L
Sbjct: 782 IIKFLVDEL 790
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+PT Y+ ++ L L+EAR+L ++M+ D ++L+ AMC+ A
Sbjct: 567 SPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMA 626
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEA---NDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
L EM +G++P +YS ++A +A ++ H V R L S + P+ Y +I
Sbjct: 627 FLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLIS--HTSCFPDELWYVGLIA 684
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
++VEEA +L E+ + +YN +L + M L+ M + +
Sbjct: 685 AYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVV 744
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ T+N++++ R+G+ DRA V M K+ PS + +V L +
Sbjct: 745 NEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAIIKFLVDELAR 792
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 38/209 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVG- 58
M+ GIKP +D L+ A+C++ VA F + + P+V TYS L+ L G
Sbjct: 596 MIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGK 655
Query: 59 -----------------------------------ELSEARKLFDEMLERKCPVDILAHN 83
++ EAR + E+ + I+A+N
Sbjct: 656 PSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYN 715
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+LL+ + + N+ + +LREM+ + +++I I FC RVL MK+
Sbjct: 716 TLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV 775
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
L P+ ++ +L + E+ +E+ L+
Sbjct: 776 -LTPSAAIIKFLVDELARAEREQESKDLV 803
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
T+++ HTYN + L+R G+ + A +++ + P TY +++ GLC GK
Sbjct: 82 TRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNF-GK 140
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
L+ AC +E MVD G+ P T + L N L G L++
Sbjct: 141 LKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLEL 178
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 8/311 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EF--TPTVKTYSILVRGLGDVGELSEA 63
PS + L+HA+CK K + F K EF P ++TY+I+V L +L EA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L +EM D++ +++L++ +CK G +D A +L EM G PD+F+ + ++A
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A + L++MK P++ TYN ++ LCK +++EA L +M+ PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+SY I+ C + A + M K V+PD Y+ +L L R G D A E+ +
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ + P + ++V GLC K GK E+AC+ E M D G P + T + L L
Sbjct: 539 TSLCK---PDFVMHKMVVDGLC-KAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594
Query: 304 GFLDIIEILAD 314
G +D L D
Sbjct: 595 GKVDKARQLVD 605
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 24/316 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G +P++ LL LCK + A + ++ + P + Y+ V GL
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229
Query: 60 LSEARKLFDEMLERKCPVDIL-----------------AHNSLLEAMCKAGNIDEAHGML 102
++EA +M+ + D + A N ++E +C++G +DEA
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHS---VFRVLDSMKRYNLVPNVFTYNCIIRKL 159
EM S P A ++ IHA C++ + +F+ + SMK + PN+ TYN ++ L
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK ++++EA +L++EM G +PD +Y+A++ C +++ A L+ M+KE V PD
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T +L L + G+ D A E+M+ RG P + TY+ ++ GLC K G+++EA +
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC-KAGRIDEAITFLA 468
Query: 280 MMVDEGIPP--YSSTV 293
MV P +S T+
Sbjct: 469 KMVAAKCTPDVFSYTI 484
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 23/327 (7%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGEL 60
E G+K ++ ++ CK V A + F +A P V T++ L++GL +
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERM 160
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA LF+ M + C +++++++LL+ +CKAG +DEA + EM PD +Y+ F
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK--------NEKVE------ 166
+ C+AN + M + ++ +I LCK N+ +E
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280
Query: 167 ---EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN---VMPDRH 220
EA + +EMI R P +N ++ C + + L RM P+
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++ L + + D A E+ M G P V TYS +V GLC K GKL+ AC E
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC-KLGKLDRACDLLEE 399
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M EG+ P S T + N L G +D
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVD 426
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 156/334 (46%), Gaps = 23/334 (6%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G + S++ + L AL K ++A++ F + + P TYSI++RGL GEL +A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIH 122
++L ++ E ++++ ++ +++ CKA +D+A + + M + G PD +++ +
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + F + + M + PNV +Y+ ++ LCK +++EA +L +EM+E+ P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL-------------- 228
D +Y + + C V A +M + D ++ V+ +
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272
Query: 229 ---LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L R G D A + +E M R PS ++ ++H +CK K +L + F+ M
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK-RLPDGVLLFQRMKSMK 331
Query: 286 ---IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
PP T ++ + L LD + L ++M
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM 365
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y+++ L +G++S +LFD + +K + +N L+A+ KA A+ ++M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G PD F+YSI + C+A ++ +L ++ + NV TY+ +I CK +V
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 166 EEAYQLLDEMIERGAN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++A ++ M G PD ++N++L C ++ A L M K P+ +Y+
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+L L + GR D A +WE M ++ P + Y+ V GLCK ++ EAC MV +
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKAN-RVAEACDCCRKMVTK 243
Query: 285 G 285
G
Sbjct: 244 G 244
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y++ I ++ R+ D + R +VFTYNC + L K + AY+ +M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
RG PD+++Y+ +L C E++ A L+ ++ + V + TY++V+ + R
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 236 DRATEVWESMEK-RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D A E++++M G P V T++ ++ GLC + ++ EA FE M G P +
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGE-RMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 295 MLRNRLVGLGFLD 307
L + L G LD
Sbjct: 184 TLLDGLCKAGRLD 196
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 146/287 (50%), Gaps = 2/287 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
EFG P++ L+ CKR ++ A FF+ K TY++L+ GL G
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ +++++M E ++ +N ++ CK G +A + EMR G + +Y+ I
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLI 310
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + +V+D MK + PN+ TYN +I C K+ +A L ++ RG +
Sbjct: 311 GGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN +++ C + + + A +++ M + + P + TY +++ R+ ++A ++
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
ME+ G P V TYSV++HG C KG++ EA + F++MV + + P
Sbjct: 431 RSPMEELGLTPDVHTYSVLIHGFC-IKGQMNEASRLFKLMVAKKLEP 476
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 155/296 (52%), Gaps = 1/296 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G P + LL + +FF+ +K + V ++ I+++G + GE+
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEI 179
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++ L E+ E +++ + +L++ CK G I++A + EM G + ++Y++
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVL 239
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH + F + + M+ + PN++TYNC++ + CK+ + ++A++L DEM ERG
Sbjct: 240 IHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGV 299
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ + +YN ++ C + N A +++ +M + + P+ TYN ++ VG+ +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ RG PS+ TY+++V G C KKG A K + M + GI P T +L
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFC-KKGDTSGAGKVVKEMEERGIKPSKITYTIL 414
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 155/297 (52%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P++Y + +++ CK K A + FD + + + TY+ L+ GL +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA K+ D+M +++ +N+L++ C G + +A + R+++S G P +Y+I
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ D +V+ M+ + P+ TY +I + + +E+A QL M E G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C + ++N A RL M + + P++ YN ++ + G RA
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRAL 498
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ME++ P+V++Y M+ LCK++ K +EA E M+D GI P S + ++
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKER-KSKEAEGLVEKMIDTGIDPSDSILNLI 554
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 27 KVAHQFFDNAK--HEFTPT------VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
K+ QFF ++ H T + + Y +++ L + F+EM+++
Sbjct: 69 KIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPG 128
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
N+LL + + + ++ E + I + D +S+ I I CEA +I F +L
Sbjct: 129 SNCFNNLLTFVVGSSSFNQWWRFFNESK-IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLV 187
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
++ + PNV Y +I CK ++E+A L EM + G +EW+Y ++
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ +M ++ V P+ +TYN V+ + GR A ++++ M +RG ++ TY+
Sbjct: 248 IKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYN 307
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
++ GLC++ K EA K + M +GI P T L + G+G L
Sbjct: 308 TLIGGLCREM-KANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKL 354
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 151/297 (50%), Gaps = 1/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + ++ + + K + F H F P ++YSIL+ GL G
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 349
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+E +LF M E+ C +D A+N++++ CK+G +++A+ +L EM+ G P +Y
Sbjct: 350 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 409
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +++E++++G
Sbjct: 410 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 469
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E+N AL M P++ TY++++ L RV +F++A
Sbjct: 470 LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 529
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W+ M+K G P+ TY+ M+ GL K LE + + + GIP +S M+
Sbjct: 530 VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 37/332 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P++ ++ ++ LCK + ++ A F+ + TP T+S L+ GLG G + +A
Sbjct: 189 GLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 248
Query: 64 RKLFDEMLE---------------------RK--------------CPVDILAHNSLLEA 88
L+++ML+ RK C D+ N+ ++
Sbjct: 249 YSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDC 308
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+ KAG ++ + RE+ + G PDA SYSI IH +A + + + +MK V +
Sbjct: 309 VFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLD 368
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
YN +I CK+ KV +AYQLL+EM +G P +Y +++ ++ A L
Sbjct: 369 THAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFE 428
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ + Y+ ++ +VGR D A + E + ++G P+V T++ ++ L K +
Sbjct: 429 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 488
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ EA F+ M D PP T +L N L
Sbjct: 489 -EINEALICFQSMKDLKCPPNQITYSILINGL 519
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 140/296 (47%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K++ V+ A + F+ K + P V TY+IL+ L G+L+ A
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAAL 179
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D+M ++L N +++ +CKA ++EA + M P+A ++S I
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 239
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + + + M VP Y +IR K + E+ +++ EM+ G +PD
Sbjct: 240 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 299
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E L + +PD +Y++++ LV+ G + E++ +
Sbjct: 300 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 359
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y+ ++ G C K GK+ +A + E M +G PP Y S ++ L
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFC-KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 13/242 (5%)
Query: 86 LEAMC-KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH----------AFCEANDIHSVF 134
L A C K+ + EA +++ MR P +Y+I I C+AN +
Sbjct: 16 LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ + +++ VP + YN +I K +EAY LL+ +G+ P +YN IL
Sbjct: 76 ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCL 135
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ V ALR+ M K + +P+ TYN+++ +L R G+ + A E+ + ME+ G +P+V
Sbjct: 136 GKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 194
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
T ++M+ LCK + KLEEAC FE M D+ P + T L + L G +D L +
Sbjct: 195 LTVNIMIDRLCKAQ-KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 253
Query: 315 KM 316
KM
Sbjct: 254 KM 255
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E G + + ++ CK V A+Q + K PTV TY ++ GL +
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 419
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF+E ++++ ++SL++ K G IDEA+ ++ E+ G P+ ++++
Sbjct: 420 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 479
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A +I+ SMK PN TY+ +I LC+ K +A+ EM + G
Sbjct: 480 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 539
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ + A L +R +PD +YN +++ L + A
Sbjct: 540 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 599
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
++E +G T V++ L K
Sbjct: 600 ALFEETRLKGCNIHTKTCVVLLDALHK 626
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 15/296 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLG-------- 55
G PS +L+ K + ++ A K +F P Y+IL+ +G
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 56 --DVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
L EA +LF+++ + RK P A+N+++ AG DEA+G+L ++ G+ P
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPC-AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+Y+ + + + R+ + MKR + VPNV TYN +I LC+ K+ A ++
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIR 182
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
D+M G P+ + N ++ C ++ A + M + P+ T++ ++ L +
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
GR D A ++E M G P Y+ ++ K G+ E+ K ++ MV G P
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFF-KCGRKEDGHKIYKEMVHTGCSP 297
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
+++ G+ P++Y + LL AL K + + A F + K + P TYSIL+ GL V +
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + EM + + + + +++ + KAGNI EA G+ ++ G PD+ SY+
Sbjct: 525 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 584
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII--RKLCKNEKVEEA 168
I AN + + + + N+ T C++ L K E +E+A
Sbjct: 585 MIEGLSSANKAMDAYALFEETRLKGC--NIHTKTCVVLLDALHKAECLEQA 633
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF P +K+++I++ G G L++
Sbjct: 211 DYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLAD 270
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++++E++ K D+ + + + ++ K+G + A + M G PD + I
Sbjct: 271 AKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I + M +V TYN +I+ CK ++E+ Y+LLD+M +G +P
Sbjct: 331 QLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSP 390
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ IL +V + L+ RM K D TYN++L L V VW
Sbjct: 391 NNMTYSYILKTTEKPKDV---ISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVW 447
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+ G P ++++MVHGL GKL+EA Y+ M G+ P T
Sbjct: 448 DEMERNGSGPDQRSFTIMVHGL-HSHGKLDEALHYYRTMESRGMTPEPRT 496
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 47/244 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P + + ++ LC +K +
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKRI---------------------------------- 338
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++F EM +R C D+ +N+L++ CK +++ + +L +M G P+ +YS
Sbjct: 339 PEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYI 398
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-DEMIERG 179
+ + D+ S ++ M++ + TYN I+ L + E+ QL+ DEM G
Sbjct: 399 LKTTEKPKDVIS---LMQRMEKSGCRLDSDTYNLIL-NLYVSWDYEKGVQLVWDEMERNG 454
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR-- 237
+ PD+ S+ ++ +++ AL M + P+ T KLLV+ R +
Sbjct: 455 SGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGMTPEPRT-----KLLVKAIRMKKDE 509
Query: 238 -ATE 240
ATE
Sbjct: 510 PATE 513
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 151/316 (47%), Gaps = 4/316 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI+ ++ + LL LCK K V+ AH F P TY+IL G +
Sbjct: 165 MAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRT 224
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ EM++R ++ +N++L+ ++ I EA EM+ E D +Y+
Sbjct: 225 PMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTV 284
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH F A D+ RV M + +VPNV TYN +I+ LCK + VE A + +EM G
Sbjct: 285 IHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGV 344
Query: 181 -NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C ++ AL + RM + + TYN+V++ G ++A
Sbjct: 345 CVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKAL 404
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLC--KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
EV+ M P++ TY+V++ + KK L A K MVD G P T +
Sbjct: 405 EVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVL 464
Query: 298 NRLVGLGFLDII-EIL 312
N LV G D EIL
Sbjct: 465 NGLVITGNQDFAKEIL 480
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 3/246 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+ KT +IL G+ A + F M E D+ + N+LL+ +CK+ ++ AH +
Sbjct: 137 PSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSL 196
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L+ + S PD +Y+I + +C RVL M + + P + TYN +++ +
Sbjct: 197 LKTLTS-RFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR 255
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ +++EA++ EM +R D +Y ++ +V A R+ M KE V+P+ T
Sbjct: 256 SNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVAT 315
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGF-YPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
YN ++++L + + A V+E M + G P+V TY+V++ GLC G +E A + E
Sbjct: 316 YNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLC-HVGDMERALGFMER 374
Query: 281 MVDEGI 286
M + G+
Sbjct: 375 MGEHGL 380
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
+ + A ++ MRS+ P + +I + H R SM + + ++ ++N
Sbjct: 119 DFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFN 178
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
++ LCK+++VE A+ LL + R PD +YN + +C MALR++ M +
Sbjct: 179 TLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRTPMALRVLKEMVQR 237
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ P TYN +LK R + A E + M+KR V TY+ ++HG G +++
Sbjct: 238 GIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGF-GVAGDVKK 296
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
A + F MV EG+ P +T L L ++ ++ ++M R C
Sbjct: 297 AKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVC 345
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P++ + ++++LC+ V A ++ D +E P + +Y+ L+ G +G
Sbjct: 303 MLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGN 362
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA LF E+ + ++ +N+L++ C+ GN+D A GM +M G PD +++I
Sbjct: 363 FAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTI 422
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ ++ + D M L P+ Y I K +A+ + +EM G
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + A L+ +M E ++PD TY ++ + G +A
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
EV+ M K+G +PSV TY+V++H +G+L+ A KYF+ M D+G+ P T L
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYA-VRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
Query: 300 LVGLGFLDIIEILADKME 317
L +D+ L +ME
Sbjct: 602 LCKENMMDVAYNLFAEME 619
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 149/294 (50%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ + L+ C+ ++ +A D+ KH P V T++ILVRG +G L A++L
Sbjct: 380 PSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKEL 439
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
FDEML R D +A+ + + K GN +A GM EM++ G PD +Y++ I+ C+
Sbjct: 440 FDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK 499
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++ M+ +VP+ TY II + + +A ++ +M+++G +P +
Sbjct: 500 LGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVT 559
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ + R ++ A + M + V P+ TYN ++ L + D A ++ ME
Sbjct: 560 YTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEME 619
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+G P+ TY+++++ + ++A K ++ M+D I P S T L L
Sbjct: 620 SKGVSPNKYTYTILINENSNLQ-YWQDALKLYKDMLDREIKPDSCTHSALMKHL 672
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 151/309 (48%), Gaps = 2/309 (0%)
Query: 9 SIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ LD L+ K+ + K F+ + P V+ + +++ L D ++E +++
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVY 195
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
M++ + I+ N+++++ CK G + A +L MR G +P+ SY++ ++
Sbjct: 196 SVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ +++ M L + TYN +IR CK E EEA L EM+ RGA P +Y
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N I+ C V+ A R + M E++MPD +YN ++ R+G F A ++ +
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ PSV TY+ ++ G C + G L+ A + M+ G+ P T +L +G L
Sbjct: 376 KNLVPSVVTYNTLIDGGC-RTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434
Query: 308 IIEILADKM 316
+ + L D+M
Sbjct: 435 MAKELFDEM 443
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M++ I+P+I + ++ + CK V A + D + P +Y++LV GL GE
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A++L ++M V +N L+ CK +EA+ + REM GA P +Y+
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+++ C + R LD M +L+P++ +YN +I + EA L E+ +
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C +++A + M K + PD T+ ++++ ++G A
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+++ M RG P Y+ + G K G +A E M EG PP T +L N
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGEL-KLGNPSKAFGMKEEMKAEGFPPDLITYNVLING 496
Query: 300 LVGLGFLDIIEILADKM 316
L LG D L KM
Sbjct: 497 LCKLGNFDDANELVQKM 513
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
R V + + L++ K +++ + +M + G PD + + + + + ++
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V V M + + P + T+N ++ CK +V A ++LD M G +P++ SYN ++
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ E + A LI +M+ + HTYN +++ + F+ A ++ M RG P
Sbjct: 251 GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+V TY+ +++ LC + G++ +A +Y ++MV+E + P
Sbjct: 311 TVVTYNTIMYSLC-RLGRVSDARRYLDVMVNEDLMP 345
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + + L++ LCK + A++ + E P TY+ ++ G L +A
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++F +ML++ ++ + L+ + G +D A EM+ G P+ +Y+ I+
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ N + + + M+ + PN +TY +I + + ++A +L +M++R PD
Sbjct: 602 LCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPD 661
Query: 184 EWSYNAILAYHCDRAEVNMALRL 206
+++A++ + ++ LRL
Sbjct: 662 SCTHSALMKHLSKDYKLLAVLRL 684
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V A Q F+ H PT Y+ L+ G V +L A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F++M R D + +N+L+ +CK + +A ++ EM G +P +++ I A
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + F VL M++ + +V ++ +++ CKN K+ EA +LD+MI + P+
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN+I+ + + + AL L+ +M V TYN++LK L R + D A E+
Sbjct: 509 AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ +G P V +Y+ ++ C KG ++A + + M GI P T L + L
Sbjct: 569 TLRNQGLRPDVVSYNTIISACC-NKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627
Query: 304 GFLDIIEILADKM 316
G + +E L +M
Sbjct: 628 GRVHDMECLYQQM 640
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 133/257 (51%), Gaps = 1/257 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+P + L++ LCK + V A + K P+V+T++ L+ G G+L +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +M ++ D+++ S+++A CK G I EA +L +M P+A Y+ I A+
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
E+ D +++ MK + ++ TYN +++ LC++ +++EA +L+ + +G PD
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN I++ C++ + + AL L+ M K + P T + ++ L GR +++
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639
Query: 245 MEKRGFYPSVSTYSVMV 261
M + PS S Y +MV
Sbjct: 640 MLHKNVEPSSSIYGIMV 656
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G KP++ + LL LC+ + D A H P TYSIL GL GE
Sbjct: 255 MLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF E L++ + + LL +CK G + +A + + G P Y+
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ D+ F + + MK ++ P+ TYN +I LCK E V +A L+ EM + G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 180 ANP-----------------------------------DEWSYNAILAYHCDRAEVNMAL 204
+P D S+ +++ C ++ A+
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V P+ YN ++ + G ++A + E M+ G S+ TY++++ GL
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C+ +++EA + + ++G+ P
Sbjct: 555 CRSS-QIDEAEELIYTLRNQGLRP 577
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+V G+ P+ + L++ C+ + ++ A F+ K P TY+ L+ GL +
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L EM + + N+L++A AG +++ +L +M+ G + D S+
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ I +LD M ++ PN YN II ++ E+A L+++M G
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN +L C ++++ A LI + + + PD +YN ++ G D+A
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
E+ + M K G P++ T +V L G++ + ++ M+ + + P SS
Sbjct: 600 ELLQEMNKYGIRPTLRTCHTLVSAL-ASAGRVHDMECLYQQMLHKNVEPSSS 650
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 139/315 (44%), Gaps = 38/315 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ + ++L+ L VG ++ R F ++ D A N +++A AG++D A M
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 102 LREM-RSIGAEP-DAFSYSIFIHAF----------------------------------- 124
LR M RS GA P DAFSY++ I
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D+ + FR+ D M PNV TYN ++ LC+ +++E L+DEM PD
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y+ + E L L K+ VM +T +++L L + G+ +A +V+E
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ G P+ Y+ +++G C+ + L A FE M I P T L N L L
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVR-DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418
Query: 305 FLDIIEILADKMERS 319
+ E L +ME+S
Sbjct: 419 MVTKAEDLVMEMEKS 433
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 129/280 (46%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + ++ L + A + FD P TY+ ++ G G+L +L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D+ML +++ +N LL +C+ G +DE ++ EM S PD F+YSI
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++ + + ++ +T + ++ LCK+ KV +A Q+ + ++ G P
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ +C ++ A + +M ++ PD TYN ++ L ++ +A ++ ME
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K G PSV T++ ++ G+LE+ M +GI
Sbjct: 432 KSGVDPSVETFNTLIDAY-GTAGQLEKCFTVLSDMQQKGI 470
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+ ++ TY++L++GL ++ EA +L + + D++++N+++ A C G+ D+A
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L+EM G P + + A A +H + + M N+ P+ Y ++
Sbjct: 601 LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660
Query: 161 KNEKVEEAYQLLDEMIERGANPDE 184
+ E + L EM E+G D+
Sbjct: 661 RCENDSKVASLKKEMSEKGIAFDD 684
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 35/341 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G P I ++ +CK H++VAH+ + + P V Y+ L++GL
Sbjct: 288 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +L EM ++ CP+D + N L++ C+ G +D +L +M G PD +Y+
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTT 407
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC E+ +A L+ +MI++G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ D A
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E+ M +G P+ YS + L +
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K+G+ E A ++ MV G P ST +L L GF+
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + + +L+A+C + V A H D P V +Y+ +++GL
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L +EM+ CP +I+ N+L+ +C+ G + H +L +M G PD Y+ I
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 306
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + +L+ M Y L PNV YN +++ LC E+ EE +LL EM ++ D
Sbjct: 307 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ ++N ++ + C V+ + L+ +M + MPD TY V+ + G D A + +
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
SM G P+ +Y++++ GLC + + +A M+ +G P T L N L
Sbjct: 427 SMTACGCKPNTISYTIVLKGLCSAE-RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 304 GFLD-IIEILADKMERSTS 321
G ++ IE+L + S
Sbjct: 486 GLVEQAIELLKQMLVNGCS 504
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 37/319 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ ALC R + A D + P Y +++ G A
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ +++ R C +D+ N +L A+C G++DEA +LR++ S G EPD SY+ +
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V +++ M R PN+ T+N +I LC+N E +++L +M+E G PD
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN +LK L R+
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M +RG P V TY+ +++G C K+G
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFC-KEG 416
Query: 270 KLEEACKYFEMMVDEGIPP 288
++EA + M G P
Sbjct: 417 LIDEAVMLLKSMTACGCKP 435
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P + +++ CK + A + P +Y+I+++GL
Sbjct: 393 MLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L +M+++ CP++ + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + ++ + Q+ D + +
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E A+ + M +P+ TY ++++ L G A
Sbjct: 573 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632
Query: 240 EVWESMEKRG 249
E+ + +G
Sbjct: 633 EMLTELCSKG 642
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+N+++ C+AG ++ A R ++ P+A++Y + A C I VLD M
Sbjct: 93 YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P Y+ I+ C+ A ++L+++ RG D + N +L CD+ V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
AL L+ + PD +YN VLK L R+ E+ E M + P++ T++ ++
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPP 288
LC + G E + MV+ G P
Sbjct: 270 SYLC-RNGLFERVHEVLAQMVEHGCTP 295
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M G KP+ +L LC + A + P T++ L+ L G
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L +ML C D+++++++++ + KAG DEA +L M + G P+ YS
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
A I+ V ++ D+++ + + YN +I LCK + E A + L M+ G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+E +Y ++ V A ++T + + +
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 158/297 (53%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G +P + L+ + + K V+ F++ K F P V++YSIL+ GL G+
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +F M ++ +D A+N++++ +CK+G +D+A+ +L EM+ P +Y
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + + K + NV Y+ +I K +++EAY +L+EM+++G
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N+++ E++ AL M + P+ +TY++++ L RV ++++A
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W+ M+K+G P+V TY+ M+ GL K G + +A FE G P S++ L
Sbjct: 756 VFWQEMQKQGLIPNVVTYTTMISGLA-KVGNITDAYSLFERFKTNGGIPDSASFNAL 811
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 2/274 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
+V ++ LVR L G++ A L DE+ DI+ +N ++ KAG++D A
Sbjct: 210 SVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFF 269
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
E+++ G PD SY+ + C+A + + M+ VP + YN +I
Sbjct: 270 HELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSA 329
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+ ++AY+LL+ + ERG P S+N+IL + +V+ AL L M K++ P+ TY
Sbjct: 330 ERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTY 388
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N+++ +L GR + A ++ + ME G +P++ + ++MV LCK +LEEA + FE
Sbjct: 389 NIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKAN-QLEEAHRIFESAS 447
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ G P S T L + L G +D L +KM
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G++P ++ LCK + A + F + E P Y+ ++ G G +A
Sbjct: 276 GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDA 335
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL + + ER C +++ NS+L + K +DEA + M+ A+P+ +Y+I I
Sbjct: 336 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDM 394
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A ++ +++ D M+ L PN+ + N ++ +LCK ++EEA+++ + ERG NP+
Sbjct: 395 LCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPN 454
Query: 184 EWSYNAILAYHCDRAEVNMALRLITR---------------------------------- 209
+Y +++ + +++ A RL +
Sbjct: 455 SVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYK 514
Query: 210 -MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD N + + + G ++ ++E M+ GF P V +YS+++HGL K
Sbjct: 515 EMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL-TKA 573
Query: 269 GKLEEACKYFEMMVDEG 285
G+ E F+ M +G
Sbjct: 574 GQARETSNIFQAMSQQG 590
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ ++ ++ LCK ++ AH+ F++A P TY L+ GLG G++ +A
Sbjct: 415 GLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDA 474
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF++ML+ + + + SL+ G ++ H + +EM G PD + ++
Sbjct: 475 YRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDC 534
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A ++ + + MK + +P+V +Y+ +I L K + E + M ++G D
Sbjct: 535 VFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALD 594
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ C +V+ A ++ M ++V P TY ++ L ++ R D A ++E
Sbjct: 595 ARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFE 654
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ +G +V YS ++ G K G+++EA E M+ +G+ P T L + LV
Sbjct: 655 EAKSKGIELNVILYSSLIDGF-GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 711
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 1/305 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G PS+ + +L L K++ V A FD K + P + TY+I++ L G ++E
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNE 403
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A K+ DEM ++L+ N +++ +CKA ++EAH + G P++ +Y I
Sbjct: 404 AYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLID 463
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ I +R+ + M N Y +IR + + E+ +++ EMI RG P
Sbjct: 464 GLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRP 523
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D N + EV + M +PD +Y++++ L + G+ + ++
Sbjct: 524 DLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIF 583
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++M ++GF Y+ +V GLC K GK+++A + E M + + P +T + + L
Sbjct: 584 QAMSQQGFALDARAYNAVVDGLC-KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642
Query: 303 LGFLD 307
+ LD
Sbjct: 643 IDRLD 647
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ ++ LCK V A++ + K + PTV TY +V GL + L EA LF+E
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ ++++ ++SL++ K G IDEA+ +L EM G P+ ++++ + A + +I
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
SMK PN +TY+ +I LC+ +K +A+ EM ++G P+ +Y +++
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMIS 778
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ A L R +PD ++N +++ + R A +V+E RG
Sbjct: 779 GLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRL 838
Query: 253 SVSTYSVMVHGLCKKKGKLEEA 274
+V T ++ L K + LE+A
Sbjct: 839 NVKTCISLLDALNKTEC-LEQA 859
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+ P++Y + L+ AL K + + A F + K + +P TYSIL+ GL V +
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + EM ++ +++ + +++ + K GNI +A+ + ++ G PD+ S++
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
I AN ++V + + NV T ++ L K E +E+A
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 39/276 (14%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ K+ +EM + A +L+ + ++ +++A ++ MR + P +Y+
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180
Query: 119 IFIHAFCEA-----------------------------------NDIHSVFRVLDSMKRY 143
+ I A EA + ++D +K
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
L P++ YN I K V+ A++ E+ G PD+ SY +++ C + A
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L +M E +P + YN ++ RFD A ++ E + +RG PSV +++ ++
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360
Query: 264 LCKKKGKLEEACKYFEMMVDEGIP---PYSSTVEML 296
L KK+ K++EA F++M + P Y+ ++ML
Sbjct: 361 LGKKR-KVDEALTLFDVMKKDAKPNISTYNIIIDML 395
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 2/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++ L+H LCK A + D + + P + TYS L+ G +A
Sbjct: 343 GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 402
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R + D+ML + ++ +N ++ A+CK G +D+A +++EM+S G +PD +Y+ I+
Sbjct: 403 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH 462
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + + ++ +V N TYN +I L +N + +E +L EM+ G D
Sbjct: 463 LCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLD 522
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ C V+ ++ L+ M + + P+ +YNM++ L + G+ A E+ +
Sbjct: 523 VISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSK 582
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P + TY+ +++GLC K G A E + +E + P T +L + +
Sbjct: 583 EMLNQGLTPDIVTYNTLINGLC-KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 641
Query: 304 GFLDIIEILADK 315
LD +L DK
Sbjct: 642 RLLDDAAMLLDK 653
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 144/304 (47%), Gaps = 4/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G PS+ LL LC+ + A V + ++RG G+L
Sbjct: 273 MMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV---NVVMLNTVIRGCLTEGKL 329
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A +L++ M + CP D+ ++ L+ +CK G A ML EM G P+ +YS
Sbjct: 330 ARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTL 389
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H+FC +LD M N YN II LCK+ K+++A +L+ EM +G
Sbjct: 390 LHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGC 449
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ + C+ + A + + +E V+ + TYN ++ L+R GR+
Sbjct: 450 KPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLR 509
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M G V +Y+ ++ LC K+G ++ + E MV +GI P + + ML N L
Sbjct: 510 LASEMLLHGCQLDVISYNGLIKALC-KEGNVDRSMALLEEMVTKGIKPNNFSYNMLINEL 568
Query: 301 VGLG 304
G
Sbjct: 569 CKAG 572
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 1/228 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP I + +++ LC ++ A F N E TY+ L+ L G E
Sbjct: 448 GCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEG 507
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EML C +D++++N L++A+CK GN+D + +L EM + G +P+ FSY++ I+
Sbjct: 508 LRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINE 567
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A + + M L P++ TYN +I LCK A LL+++ +PD
Sbjct: 568 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 627
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
+YN ++++HC ++ A L+ + ++P+ T+ M+++ VR
Sbjct: 628 IVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 7/290 (2%)
Query: 29 AHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLL 86
A D F +P+ ++Y++++ L ++A L+ ML + P
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
A+C+ G +A +LR M G PDA Y IHA + +LD M
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
+V T+N ++ LC +V EA +L+D M+ +G P +Y +L C + + A +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ R+ + NV+ N V++ + G+ RATE++E M +G P V TYS+++HGLC
Sbjct: 305 LGRLPEVNVV----MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC- 359
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K G+ A + + M ++G P T L + G D + D+M
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 1/273 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G + + +++ALCK + A + K + P + TY+ ++ L +
Sbjct: 409 MLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDL 468
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +F ++E + + +N+L+ A+ + G E + EM G + D SY+
Sbjct: 469 MEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ ++ +L+ M + PN F+YN +I +LCK KV +A +L EM+ +G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + AL L+ ++ ENV PD TYN+++ +V D A
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ + G P+ T+ +MV ++ LE
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQNFVRQTVNLE 681
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 33/313 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ + ALC+ A A+H P Y ++ L G ++EA
Sbjct: 173 VPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAA 232
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEML C D+ N L+ +C G + EA ++ M + G P +Y +
Sbjct: 233 MLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGL 292
Query: 125 CEANDIHSVFRVLDSMKRYNLV-------------------------------PNVFTYN 153
C +L + N+V P+V TY+
Sbjct: 293 CRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYS 352
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
++ LCK + A ++LDEM E+G P+ +Y+ +L C + A ++ +M +
Sbjct: 353 ILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAK 412
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ YN ++ L + G+ D+AT + + M+ +G P + TY+ M++ LC +EE
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNND-LMEE 471
Query: 274 ACKYFEMMVDEGI 286
A F +++EG+
Sbjct: 472 AEHIFRNLIEEGV 484
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 93/242 (38%), Gaps = 30/242 (12%)
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R P SY++ + A+ + M R + P FT+ R LC+ +
Sbjct: 134 RRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 193
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+A LL M G PD Y ++ + V A L+ M D +T+N +
Sbjct: 194 GDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDL 253
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK----------------- 268
+ L +GR A + + M +G PSV TY ++ GLC+ +
Sbjct: 254 VLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNV 313
Query: 269 -------------GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
GKL A + +EMM +G PP T +L + L LG + D+
Sbjct: 314 VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDE 373
Query: 316 ME 317
ME
Sbjct: 374 ME 375
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G + + + L+ ALCK +V + + P +Y++L+ L G+
Sbjct: 514 MLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L EML + DI+ +N+L+ +CK G A +L ++ + PD +Y+I
Sbjct: 574 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNI 633
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
I C+ + +LD +VPN T+ +++ + E Y
Sbjct: 634 LISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEGY 683
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 152/284 (53%), Gaps = 5/284 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+PS ++ LL L K V +A + F +A + +P + T++ ++ GL +G+L +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCK---AGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ ++ + +NSL++ CK AGN+ +L+EM G P A ++ + I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ ++ + RV + MK+ + +V TYN +I LC KVEE +L++EM + G +P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+E ++ +L C + + A I MT+ NV PD Y +++ R+G+ + A V
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+M K+G P+V+TY+ ++ G + G A + M ++GI
Sbjct: 393 EAMAKKGISPNVTTYNCLITGF-SRSGDWRSASGLLDEMKEKGI 435
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE GI P+ L++ CK + A + F+ K + +V TY+ L+ GL G+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KL +EM + + + +L+ CK G + +A+ + M EPD Y+I
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTI 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + V ++M + + PNV TYNC+I ++ A LLDEM E+G
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + EV A++L+ M++ + P+ TYN +++ G A
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ MEK +V TY+V + C + GK++EA M+D+ + P T E ++
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFC-QIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 300 LVGLGF 305
++ G+
Sbjct: 554 MMEKGY 559
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G++P+ + ++ C + ++K A++ K V TY++ ++ +G+
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+ EA L +EML++ + + + ++ E M + G + G
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 162/323 (50%), Gaps = 9/323 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++ + L+H LC ++ + A F+ + + P V+TYS L+ G G+
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++++ M+ C +++A+ +++ +C+ ++A+ ++ M+ P+ +++
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C + + +V D M PN TYN ++ L K+ + EA+ L+ +M RG
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN I+ +C + AL L+ +M PD T N+V+ + G+ + A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RN 298
++ + + ++P + Y+ ++ G+C G +EEA Y M+ EGI P +T +L R+
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIG-VEEAIVYLRRMLSEGISPNVATWNVLVRH 640
Query: 299 RLVGLG------FLDIIEILADK 315
+G FLD I+ K
Sbjct: 641 LFSNMGHSGAVQFLDASSIMQPK 663
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 11/332 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P+++ + LL ALCK V AH+ + + P +Y+ L+ L +G++ EA
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+L PV +N+L+ +CK +EA +L EM + G +P+ SY+ I+A
Sbjct: 236 RELAMS-FTPSVPV----YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A ++ VL M PN+ T+ +I+ EA D MI G P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ C + + A+ + +M P+ TY+ ++ + G D A+EVW
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G +P+V Y+ MV LC+ +A E M E PP + T L G
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNS-MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 304 GFLDIIEILADKMERS----TSCTIQELANAM 331
G +D + D+M S + T EL +++
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 153/318 (48%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++ +++AL +V+++ +P + T++ L++G G
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +D M+ +++A+N+L+ +C ++ +A + +M G P+ +YS
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +A D+ V + M + PNV Y C++ LC+N +AY L++ M
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N + C V+ A+++ +M P+ TYN +L L++ RF A
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + ME RG ++ TY+ +++G C G L EA + MV G P + TV ++ +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYC-CAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570
Query: 300 LVGLGFLDIIEILADKME 317
G ++I L D++
Sbjct: 571 YCKQGKVNIAIQLMDRLS 588
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 147/306 (48%), Gaps = 10/306 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P L+ +LCK VK A + FTP+V Y+ L+ G+ EA
Sbjct: 211 GCDPDEVSYTTLISSLCKLGKVKEAREL----AMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L DEM+ + +++++ +++ A+ AGN++ + +L +M + G P+ +++ I F
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
H D M R +VPNV YN ++ LC + +A + ++M G P+
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A++ + +++ A + M P+ Y ++ +L R F++A + E+
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV-----EMLRNR 299
M+ P+ T++ + GLC G+++ A K F+ M + G P ++T +L++R
Sbjct: 447 MQVENCPPNTVTFNTFIKGLC-GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 300 LVGLGF 305
G F
Sbjct: 506 RFGEAF 511
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 37/316 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEAR 64
K S+ +L L + +A ++F + + F T TY +++ L E+ +
Sbjct: 37 KSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQ 96
Query: 65 KLFDEM-LER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
L +M LE C D+ S++ + +AG+ ++A M+ +P Y+ +
Sbjct: 97 YLLQQMKLEGISCSEDLFI--SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILD 154
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A + N + + +MK+ + PNVFTYN +++ LCKN +V+ A++LL EM +G +P
Sbjct: 155 ALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDP 214
Query: 183 DEWSYNAILAYHCDRAEVN------------------------------MALRLITRMTK 212
DE SY +++ C +V A +L+ M
Sbjct: 215 DEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMN 274
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ + P+ +Y ++ L G + + V M RG P++ T++ ++ G K G
Sbjct: 275 KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS-H 333
Query: 273 EACKYFEMMVDEGIPP 288
EA +++ M+ EG+ P
Sbjct: 334 EALDFWDRMIREGVVP 349
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 163/323 (50%), Gaps = 2/323 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G + + LL AL + A Q FD +++P +++Y+ L+ + L
Sbjct: 290 MKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNL 349
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE+ D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 350 VEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTML 409
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M+ P+V TY C++ ++++ +L+EM ++G
Sbjct: 410 IRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGC 469
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-FDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K R +
Sbjct: 470 PPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGC 529
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
VWE M +RG P V++Y+V ++G + G+ EEA KY E M+++G+
Sbjct: 530 AVWEEMHRRGICPDVNSYTVFINGHI-RHGRPEEAYKYIEEMINKGMTAPQIDYNKFAAD 588
Query: 300 LVGLGFLDIIEILADKMERSTSC 322
G DI+ LA K++ + C
Sbjct: 589 FSKAGKPDILYELALKVKFAGKC 611
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 38/310 (12%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L L LC+ + V H+F KH P+ + + R G + + +ML
Sbjct: 187 LSALSPPLCEAVVLAVLHRF----KHAHRPSYRFF----RWATASGGFTHTTITYCKMLH 238
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIHAFCEANDIH 131
IL E M +++EM +GA DAF + I +F A +I
Sbjct: 239 ------ILGKTRQFEMMV---------AIIQEMGKVGALSMDAFK--VAIKSFAAAGEIK 281
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ V + MK+ V ++NC++ L EA Q+ D+M + +PD SY A++
Sbjct: 282 NAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQ-YSPDLRSYTALM 340
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C+ + A R+ M ++ + PD +N +++ L+R R A +++E M+ +G
Sbjct: 341 LAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPP 400
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+V TY++++ C K+GK++ A + FE M + P +T L LVG G
Sbjct: 401 PNVWTYTMLIRDHC-KRGKMDMAMECFEEMQEARCQPDVATYTCL---LVGYGN------ 450
Query: 312 LADKMERSTS 321
A +M+R T+
Sbjct: 451 -AKRMDRVTA 459
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 160/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +FG KP ++ + +LH + +++ +A ++ K + P T+ IL+ GL G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A K+FDEM ++ P + + + +L +C+A D+ H +L M+ G PD+ + +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ I F +L ++ V + Y+ +I L + ++ +E + +M + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C+ V+ AL ++ MT+ + PD + YN ++K VG D+A
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + K +P+ TY++++ G+C + G L+EA + F M + G P T L +
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMC-RNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 300 LVGLGFLDIIEILADKME 317
L G L+ L KME
Sbjct: 456 LCKAGELEEARHLFYKME 473
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 7/301 (2%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
N+ + P T+S+L+ G +A + F +M + C D+ +NS+L M +
Sbjct: 124 NSNIQIPP--PTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEV 181
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
A + +M + P+ ++ I ++ C+ ++ D M + + PN Y
Sbjct: 182 FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTI 241
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
I+ LC+ ++ ++ ++LL+ M G PD + NA+L C +++ A L+ KE
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ Y+ ++ L R R+D E M K G P V Y++++ G C + G ++ A
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC-EVGMVDYA 360
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS----TSCTIQELANA 330
M G+ P + L +G LD L ++ ++ TSCT L
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420
Query: 331 M 331
M
Sbjct: 421 M 421
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 162/322 (50%), Gaps = 23/322 (7%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ +C+ + A Q F+ ++ +P++ T++ L+ GL GEL EAR LF +M K
Sbjct: 417 LICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGK 476
Query: 75 CP-------------VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
P +D + +++E +C++G I +A+ +L ++ G PD +Y++ I
Sbjct: 477 NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLI 536
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FC+A +I+ F++ ++ P+ TY +I + ++ E+A+++LD+M++ G
Sbjct: 537 NGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCT 596
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL---VRVGRFDRA 238
P Y ++ + C + ++++A L + + +P + + LKL G ++A
Sbjct: 597 PSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS--LPSQE--DETLKLAEEHFEKGELEKA 652
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M + ++ Y++ + GLC+ + + EEA K F ++ + + + ML N
Sbjct: 653 VRCLLEMNFKLNNFEIAPYTIWLIGLCQAR-RSEEALKIFLVLKECQMDVNPPSCVMLIN 711
Query: 299 RLVGLGFLDI-IEILADKMERS 319
L G L++ ++I +E+
Sbjct: 712 GLCKDGNLEMAVDIFLYTLEKG 733
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
T+++++ L K+ +E+ + + L+ A K+G ++A +M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G +PD F+Y+ +H + V + M + N PN T+ ++ LCKN K
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++A ++ DEM ++G P+ Y IL+ C + RL+ M PD T N +
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L ++G+ D A + + EK G+ + YS ++ GL + K + +E ++ M G
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAK-RYDEVQEWCRKMFKAG 336
Query: 286 IPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTS 321
I P +L +G +D + +L D +R S
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T+N +I L K++ + +++L+E+ +++ ++A + A+ +M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
PD TYN +L ++V+ F A V+ M K + P+ +T+ ++++GLCK GK
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKN-GK 216
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANA 330
++A K F+ M +GIPP + ++ + L D + L + M+ S C NA
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 331 M 331
+
Sbjct: 277 L 277
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 12/256 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ + G+ P I + L++ CK K++ A + F + + +P TY L+ G V
Sbjct: 520 LADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDR 579
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYS 118
+A ++ D+M++ C + L+ C+ G + A + L+ +RS+ ++ D +
Sbjct: 580 EEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDE-TLK 638
Query: 119 IFIHAFCEANDIHSVFRVLDSM----KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ F E ++ R L M + + P Y + LC+ + EEA ++
Sbjct: 639 LAEEHF-EKGELEKAVRCLLEMNFKLNNFEIAP----YTIWLIGLCQARRSEEALKIFLV 693
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+ E + + S ++ C + MA+ + ++ M N +L+ L+ +
Sbjct: 694 LKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDK 753
Query: 235 FDRATEVWESMEKRGF 250
A ++ M G+
Sbjct: 754 MKHALDLLNRMNSAGY 769
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G K I L+ C + D K + TP V +S L+ G+L EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM++R D + + SL++ CK +D+A+ ML M S G P+ +++I I+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M +V + TYN +I+ C+ K+E A +L EM+ R PD
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY +L CD E AL + ++ K + D YN+++ + + D A +++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P V TY++M+ GLC KKG L EA F M ++G P T +L +G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLC-KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 304 G 304
G
Sbjct: 576 G 576
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 6/330 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + A F+ + + F + Y+ L+RG G + KL +M++RK
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++A ++L++ K G + EA + +EM G PD +Y+ I FC+ N +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+LD M PN+ T+N +I CK +++ +L +M RG D +YN ++
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C+ ++ +A L M V PD +Y ++L L G ++A E++E +EK +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
Y++++HG+C K+++A F + +G+ P T ++ L G L ++L
Sbjct: 493 GIYNIIIHGMCNAS-KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 315 KMERS----TSCTIQELANAMRGKTGFRKS 340
KME CT L A G+ KS
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP++ L+ L++ LC V A D + F P TY +++ + G+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M ERK +D + ++ +++ +CK G++D A + EM G + D Y+
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A ++L M + + P+V ++ +I K K+ EA +L EMI+RG
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y +++ C +++ A ++ M + P+ T+N+++ + D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ G C + GKLE A + F+ MV + P + ++L +
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 300 L 300
L
Sbjct: 467 L 467
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++Y L +++ C+ + + +A K + P T+S L+ GL G +SEA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+E ++ N+L+ +C G + +A ++ M G +P+ +Y +
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ +L M+ + + Y+ II LCK+ ++ A+ L +EM +G D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ C + +L+ M K + PD ++ ++ V+ G+ A E+ +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M +RG P TY+ ++ G CK+ +L++A ++MV +G P T +L N
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKEN-QLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P L+ CK + A+ D P ++T++IL+ G
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +N+L++ C+ G ++ A + +EM S PD SY I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + ++ YN II +C KV++A+ L + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ P+ TYN++++ + G ++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ E +++ GF ST ++V L G+L+++ + +M+
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDML--SDGRLKKS--FLDML 620
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G+ D+ E +A LF EM + ++ + L + + D + ++M G
Sbjct: 47 GIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH 105
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ ++ SI I+ C + F + + + P+ T++ +I LC +V EA +L+
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
D M+E G P + NA++ C +V+ A+ LI RM + P+ TY VLK++ +
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
G+ A E+ ME+R YS+++ GLC K G L+ A F M +G
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKG 277
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
K ++A L EM P ++ + + + ++ L L +M + + + +T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R + A + K G+ P T+S +++GLC + G++ EA + + MV+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE-GRVSEALELVDRMVE 170
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G P T+ L N L G + +L D+M
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G K I L+ C + D K + TP V +S L+ G+L EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM++R D + + SL++ CK +D+A+ ML M S G P+ +++I I+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M +V + TYN +I+ C+ K+E A +L EM+ R PD
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY +L CD E AL + ++ K + D YN+++ + + D A +++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P V TY++M+ GLC KKG L EA F M ++G P T +L +G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLC-KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 304 G 304
G
Sbjct: 576 G 576
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 6/330 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + A F+ + + F + Y+ L+RG G + KL +M++RK
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++A ++L++ K G + EA + +EM G PD +Y+ I FC+ N +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+LD M PN+ T+N +I CK +++ +L +M RG D +YN ++
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C+ ++ +A L M V PD +Y ++L L G ++A E++E +EK +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
Y++++HG+C K+++A F + +G+ P T ++ L G L ++L
Sbjct: 493 GIYNIIIHGMCNAS-KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 315 KMERS----TSCTIQELANAMRGKTGFRKS 340
KME CT L A G+ KS
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP++ L+ L++ LC V A D + F P TY +++ + G+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M ERK +D + ++ +++ +CK G++D A + EM G + D Y+
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A ++L M + + P+V ++ +I K K+ EA +L EMI+RG
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y +++ C +++ A ++ M + P+ T+N+++ + D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ G C + GKLE A + F+ MV + P + ++L +
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 300 L 300
L
Sbjct: 467 L 467
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++Y L +++ C+ + + +A K + P T+S L+ GL G +SEA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+E ++ N+L+ +C G + +A ++ M G +P+ +Y +
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ +L M+ + + Y+ II LCK+ ++ A+ L +EM +G D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ C + +L+ M K + PD ++ ++ V+ G+ A E+ +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M +RG P TY+ ++ G CK+ +L++A ++MV +G P T +L N
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKEN-QLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P L+ CK + A+ D P ++T++IL+ G
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +N+L++ C+ G ++ A + +EM S PD SY I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + ++ YN II +C KV++A+ L + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ P+ TYN++++ + G ++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 240 EVWESMEKRGFYPSVST 256
++ E +++ GF ST
Sbjct: 583 KLIEEIKRCGFSVDAST 599
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 28/318 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P+I + L++ CK + + F + TY+ L++G ++G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A++LF EM+ R+ DI+++ LL+ +C G ++A + ++ E D Y+I
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C A+ + + + S+ + P+V TYN +I LCK + EA L +M E G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 180 ANPDEWSYNAILAYH----------------------CDRAEVNMALRLITRMTKENVMP 217
+P+ +YN ++ H D + + AL + RM K P
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617
Query: 218 DRHTYNMVLK---LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
D T+ +L+ L +D T ++++M+ G+ P+V TY+ ++ GL + +
Sbjct: 618 DVFTFTTLLRPFCLEENASVYDAPT-LFKNMKAMGYKPNVVTYNTVIKGLLNGN-MISQV 675
Query: 275 CKYFEMMVDEGIPPYSST 292
+ M + G P + T
Sbjct: 676 PGVLDQMFERGCQPNAVT 693
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 2/236 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G+ D+ E +A LF EM + ++ + L + + D + ++M G
Sbjct: 44 LRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG 102
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ ++ SI I+ C + F + + + P+ T++ +I LC +V EA
Sbjct: 103 IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL 162
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L+D M+E G P + NA++ C +V+ A+ LI RM + P+ TY VLK++
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G+ A E+ ME+R YS+++ GLC K G L+ A F M +G
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKG 277
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLF 67
IY++ ++H +C V A F + + P VKTY+I++ GL G LSEA LF
Sbjct: 493 GIYNI--IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 68 DEMLE-----RKCPVDIL--AHNSLLEAMCKAGNIDE---------------AHGMLREM 105
+M E C +IL AH +A A I+E A L M
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARM 610
Query: 106 RSIGAEPDAFSYSIFIHAFC--EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
G EPD F+++ + FC E ++ + +MK PNV TYN +I+ L
Sbjct: 611 LKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGN 670
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+ + +LD+M ERG P+ + + ++ C + A+ L+ +M +N
Sbjct: 671 MISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
K ++A L EM P ++ + + + ++ L L +M + + + +T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R + A + K G+ P T+S +++GLC + G++ EA + + MV+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE-GRVSEALELVDRMVE 170
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G P T+ L N L G + +L D+M
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 157/311 (50%), Gaps = 8/311 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EF--TPTVKTYSILVRGLGDVGELSEA 63
PS + L+HA+CK K + F K EF P ++TY+I+V L +L EA
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L +EM D++ +++L++ +CK G +D A +L EM G PD+F+ + ++A
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A + L++MK P++ TYN ++ LCK +++EA L +M+ PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+SY I+ C + A + M K V+PD Y+ +L L R G D A E+ +
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ + P + +++ GLC K GK E+AC+ E M D G P + T + + L L
Sbjct: 539 TSLCK---PDFVMHKMVLDGLC-KAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKL 594
Query: 304 GFLDIIEILAD 314
G +D L D
Sbjct: 595 GKVDKARQLVD 605
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 24/316 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G +P++ LL LCK + A + ++ + P + Y+ V GL
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229
Query: 60 LSEARKLFDEMLERKCPVDIL-----------------AHNSLLEAMCKAGNIDEAHGML 102
++EA +M+ + D + A N ++E +C++G +DEA
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHS---VFRVLDSMKRYNLVPNVFTYNCIIRKL 159
EM S P A ++ IHA C++ + +F+ + SMK + PN+ TYN ++ L
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK ++++EA +L++EM G +PD +Y+A++ C +++ A L+ M+KE V PD
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T +L L + G+ D A E+M+ RG P + TY+ ++ GLC K G+++EA +
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC-KAGRIDEAITFLA 468
Query: 280 MMVDEGIPP--YSSTV 293
MV P +S T+
Sbjct: 469 KMVAAKCTPDVFSYTI 484
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 150/327 (45%), Gaps = 23/327 (7%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGEL 60
E G+K ++ ++ CK V A + F ++ P V T++ L++GL +
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERM 160
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA LF+ M + C +++++++LL+ +CKAG +DEA + EM PD +Y+ F
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK--------NEKVE------ 166
+ C+AN + M + ++ +I LCK N+ +E
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280
Query: 167 ---EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN---VMPDRH 220
EA + +EMI R P +N ++ C + + L RM P+
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++ L + + D A E+ M G P V TYS +V GLC K GKL+ AC E
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC-KLGKLDRACDLLEE 399
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M EG+ P S T + N L G +D
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVD 426
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 156/334 (46%), Gaps = 23/334 (6%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G + S++ + L AL K ++A++ F + + P TYSI++RGL GEL +A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIH 122
++L ++ E ++++ ++ +++ CKA +D+A + + M S G PD +++ +
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + F + + M + PNV +Y+ ++ LCK +++EA +L +EM+E+ P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL-------------- 228
D +Y + + C V A +M + D ++ V+ +
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272
Query: 229 ---LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L R G D A + +E M R PS ++ ++H +CK K +L + F+ M
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK-RLPDGVLLFQRMKSMK 331
Query: 286 ---IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
PP T ++ + L LD + L ++M
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM 365
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y+++ L +G++S +LFD + +K + +N L+A+ KA A+ ++M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G PD F+YSI + C+A ++ +L ++ + NV TY+ +I CK +V
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 166 EEAYQLLDEMIERGAN-PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++A ++ M G PD ++N++L C ++ A L M K P+ +Y+
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+L L + GR D A +WE M ++ P + Y+ V GLCK ++ EAC MV +
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKAN-RVAEACDCCRKMVTK 243
Query: 285 G 285
G
Sbjct: 244 G 244
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRY-NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y++ I ++ R+ D + R +VFTYNC + L K + AY+ +M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
RG PD+++Y+ +L C E++ A L+ ++ + V + TY++V+ + R
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 236 DRATEVWESMEK-RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D A E++++M G P V T++ ++ GLC + ++ EA FE M G P +
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGE-RMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 295 MLRNRLVGLGFLD 307
L + L G LD
Sbjct: 184 TLLDGLCKAGRLD 196
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P++ + LL C + A H D P + +Y+ ++ G
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFT 216
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ +A LF +M ++ P +++ + +++ +CKA +D A G+ ++M G P+ +
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + V R+L M + L P+ FTY ++ LCK K EA +L D MI
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI 336
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G PD Y IL + + ++ + M + P+ + +N+V +
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIG 396
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A +++ M ++G P+V Y+ ++ LC K G++++A F M++EG+ P
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYATLIDALC-KLGRVDDAELKFNQMINEGVAP 447
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 159/354 (44%), Gaps = 35/354 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y + + A K+ + A F+ + + +P V Y+ L+ L +G
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ +I+ SL+ +C ++A + EM + G P+ ++
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + R++D M+R P++ +YN +IR C K +EA +LLD M+ G
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN +L +C ++ A + M + P TYN +L L + RF A
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E++ +M G S+ TY+++++GL K
Sbjct: 610 ELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL 669
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
K G+ E+A F + G+ P +T ++ L+ G L+ + + +ME+S
Sbjct: 670 LKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKS 723
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 138/286 (48%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GIKP + +LH + + H F D + +P ++I+
Sbjct: 335 MIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAM 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +F++M ++ +++ + +L++A+CK G +D+A +M + G P+ ++
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C + + M + PNV +N I+ LC +V +A +L+D M G
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYNA++ HC + + A +L+ M + P+ TYN +L R GR D A
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
V++ M G P V TY+ ++HGL K + + EA + + M+ G
Sbjct: 575 SVFQEMLSNGITPVVVTYNTILHGLFKTR-RFSEAKELYLNMITSG 619
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 37/328 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G++P+I L+H K V + + H P TY +L+ L G+
Sbjct: 265 MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGK 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARKLFD M+ + D+ + +L G + E H L M G P+ + ++I
Sbjct: 325 CTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNI 384
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---------------NEK 164
AF + I + + M++ L PNV Y +I LCK NE
Sbjct: 385 VFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEG 444
Query: 165 V--------------------EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
V E+A +L EM+ +G +P+ +N I+ C V A
Sbjct: 445 VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQ 504
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RLI M + PD +YN +++ VG+ D A+++ + M G P+ TY+ ++HG
Sbjct: 505 RLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGY 564
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSST 292
C + G++++A F+ M+ GI P T
Sbjct: 565 C-RDGRIDDAYSVFQEMLSNGITPVVVT 591
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 147/306 (48%), Gaps = 20/306 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV GI P++ + ++ LC V A + D + T P + +Y+ L+RG VG+
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL D ML + +N+LL C+ G ID+A+ + +EM S G P +Y+
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594
Query: 120 FIHA------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+H F EA +++ ++ S K+++ ++TYN I+ L KN V+EA ++
Sbjct: 595 ILHGLFKTRRFSEAKELY--LNMITSGKQWS----IYTYNIILNGLSKNNCVDEALKMFQ 648
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ + D ++N ++ A+ L ++ ++PD TY ++ + L+ G
Sbjct: 649 SLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEG 708
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK---KGKLEEACKYFEMMVDEGIPPYS 290
+ ++ MEK G P+ S+M++ L ++ +G + A Y + ++ +
Sbjct: 709 SLEEFDGMFSEMEKSGCAPN----SLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEA 764
Query: 291 STVEML 296
ST ML
Sbjct: 765 STTSML 770
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 125/318 (39%), Gaps = 89/318 (27%)
Query: 58 GELS--EARKLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREM 105
G LS +A KLFDE L P I+A N LL A+ A + + M+R+
Sbjct: 27 GSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDC 86
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFR------------------------------ 135
S A PD F+YSI + FC + F
Sbjct: 87 CSKVA-PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKR 145
Query: 136 -------VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE---RGANPDEW 185
+L M PNV +YN +++ C + EEA +LL M + R P+
Sbjct: 146 VGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLV 205
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SYN ++ +V+ A L MT + + P+ TY +V+ L + DRA V++ M
Sbjct: 206 SYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265
Query: 246 EKRGFYPSVSTYSVMVHG-----------------------------------LCKKKGK 270
+G P++ TY+ ++HG LC KKGK
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLC-KKGK 324
Query: 271 LEEACKYFEMMVDEGIPP 288
EA K F+ M+ +GI P
Sbjct: 325 CTEARKLFDSMIRKGIKP 342
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP+ + LLH C+ + A+ F + TP V TY+ ++ GL
Sbjct: 545 MLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ I +N +L + K +DEA M + + S + D +++I
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY I L + +EE + EM + G
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ N ++ R +++ A ++++ ++N + T +M++ L R
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSR 776
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G +P I + L+ C A + D P TY+ L+ G G
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +F EML ++ +N++L + K EA + M + G + ++Y+I
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + N + ++ S+ +L ++ T+N +I L K+ + E+A L + G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y I + + + + M K P+ N +++ L+ G RA
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++++ F ST S+++
Sbjct: 750 AYLSKIDEKNFSLEASTTSMLI 771
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+PS+ + +++ LCK+ V+ A + +++ P TY+ L+ G
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +FD M++ C + + +++L+ +C G ++EA ML EM G EP ++Y+I
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C+A +L MK+ VPN+ T+ +I L ++ K E A L +M+ G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNA++ C A + M +P TYN ++K +G +A
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ M K G P+V TY+ +++G C K+G L A + E+M G+ P
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYC-KQGNLNNAMRLLEIMKGNGLKP 480
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 153/307 (49%), Gaps = 4/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L++ LC + A F H P+ +TY+ +++ +G+
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +FD+ML+ +++ +N+L+ CK GN++ A +L M+ G +PDA++Y+
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + M + + PN TY II KV++A L +M+E G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN +++ ++ A +M K+ ++P+ TY + L R GR A
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY--FEMMVDEGIPPYSSTVEMLR 297
+++ MEKR ++P++ TYS +++GLC ++G+ E+A Y + G P T L
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLC-QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 298 NRLVGLG 304
L G G
Sbjct: 667 KGLCGEG 673
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 158/323 (48%), Gaps = 17/323 (5%)
Query: 26 VKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
VK QF N+K++F T+ +++ L+ LG + AR ++ +ML +L N
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFN 206
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+++ +CK G + EA ++ + A P+AF+Y+ I C +++ F + D M +
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD 266
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
PN TY+ +I LC ++EEA +L+EM+++G P ++Y L CD + A
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L+ +M K +P+ T+ ++ L R G+F+ A ++ M G P+ TY+ +++
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS-- 321
LC +G+ E A F+ M+ G P + T + +G + ++ DKM ++ S
Sbjct: 387 LC-VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 322 ------------CTIQELANAMR 332
C L NAMR
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMR 468
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 7/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI+P++Y L +LC A + K P ++T++ L+ GL G+
Sbjct: 298 MVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L+ +ML + +N+L+ +C G + A + + M S G+ P +Y+
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC DI + D M + PNV TYN +I CK + A +LL+ M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD W+Y +++ ++ A L M + + P+ TY ++ + + D A
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++ M + G PS TY+VM+ G K + EA + MV +G+ P Y+S ++
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGF-SKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 296 L-RNRLVGLGF 305
L RN GL F
Sbjct: 597 LCRNGRTGLAF 607
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G P+ L++ LC ++ A + + PTV TY+I + L D G
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA +L +M +R C +I +L+ + + G + A G+ +M + G P +Y+
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + F + M + +P+ TYN II+ C +++A + D+M++ G
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
++P+ +YN ++ +C + +N A+RL+ M + PD TY ++ R G+ + AT
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + G P+ TY+ ++ G K+++A F MV+ G P S T ++
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYF-NLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 6/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P+ ++ V A F+ + P+ +TY++++ G
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +M+++ +++ + S ++ +C+ G A + EM P+ ++YS
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627
Query: 120 FIHAFCE---ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I+ C+ A D ++ +L + Y PNV TY +++ LC + EA QL+ M
Sbjct: 628 LIYGLCQEGRAEDAE-MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQ 686
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++G P E Y A+L C +V AL + M Y ++ L + +
Sbjct: 687 KKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIE 746
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++++M ++ + ++V++ GL K+G+ + K +M T ML
Sbjct: 747 EAQCIFQTMLEKHWNSDEVVWTVLLDGLL-KEGETDLCLKLLHVMESRNCTLNFQTYVML 805
Query: 297 RNRLVGL 303
L L
Sbjct: 806 ARELSAL 812
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 151/297 (50%), Gaps = 1/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G P + ++ + + K + F H F P ++YSIL+ GL G
Sbjct: 535 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 594
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+E +LF M E+ C +D A+N++++ CK+G +++A+ +L EM+ G P +Y
Sbjct: 595 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 654
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +++E++++G
Sbjct: 655 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 714
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E+N AL M P++ TY++++ L RV +F++A
Sbjct: 715 LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 774
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W+ M+K G P+ TY+ M+ GL K LE + + + GIP +S M+
Sbjct: 775 VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 157/317 (49%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M +F +P+ L+ AL + R+ + F + + V ++ L+R G
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L DEM DI+ +N ++ KAG +D + EM+S G PD +Y+
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+AN + + + +++ VP + YN +I K +EAY LL+ +G
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P +YN IL + V ALR+ M K + +P+ TYN+++ +L R G+ + A
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAAL 424
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ + ME+ G +P+V T ++M+ LCK + KLEEAC FE M D+ P + T L +
Sbjct: 425 EIRDDMERAGLFPNVLTVNIMIDRLCKAQ-KLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483
Query: 300 LVGLGFLDIIEILADKM 316
L G +D L +KM
Sbjct: 484 LGKCGRVDDAYSLYEKM 500
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 37/332 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P++ ++ ++ LCK + ++ A F+ + TP T+S L+ GLG G + +A
Sbjct: 434 GLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 493
Query: 64 RKLFDEMLE---------------------RK--------------CPVDILAHNSLLEA 88
L+++ML+ RK C D+ N+ ++
Sbjct: 494 YSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDC 553
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+ KAG ++ + RE+ + G PDA SYSI IH +A + + + +MK V +
Sbjct: 554 VFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLD 613
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
YN +I CK+ KV +AYQLL+EM +G P +Y +++ ++ A L
Sbjct: 614 THAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFE 673
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ + Y+ ++ +VGR D A + E + ++G P+V T++ ++ L K +
Sbjct: 674 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 733
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ EA F+ M D PP T +L N L
Sbjct: 734 -EINEALICFQSMKDLKCPPNQITYSILINGL 764
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 140/296 (47%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K++ V+ A + F+ K + P V TY+IL+ L G+L+ A
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAAL 424
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D+M ++L N +++ +CKA ++EA + M P+A ++S I
Sbjct: 425 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + + + M VP Y +IR K + E+ +++ EM+ G +PD
Sbjct: 485 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 544
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E L + +PD +Y++++ LV+ G + E++ +
Sbjct: 545 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 604
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y+ ++ G C K GK+ +A + E M +G PP Y S ++ L
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFC-KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 10/290 (3%)
Query: 6 IKPSIYDLDQLLHALC-----KRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+K + D D +L+ +C K V ++ +FF K H P TY+ ++ L
Sbjct: 256 MKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANR 315
Query: 60 LSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L EA +LF+++ + RK P A+N+++ AG DEA+G+L ++ G+ P +Y+
Sbjct: 316 LDEAVELFEQLEQNRKVPC-AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYN 374
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + + R+ + MKR + VPNV TYN +I LC+ K+ A ++ D+M
Sbjct: 375 CILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERA 433
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ + N ++ C ++ A + M + P+ T++ ++ L + GR D A
Sbjct: 434 GLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 493
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M G P Y+ ++ K G+ E+ K ++ MV G P
Sbjct: 494 YSLYEKMLDCGHVPGAIVYTSLIRSFF-KCGRKEDGHKIYKEMVHTGCSP 542
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G + + ++ CK V A+Q + K + PTV TY ++ GL +
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF+E ++++ ++SL++ K G IDEA+ ++ E+ G P+ ++++
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A +I+ SMK PN TY+ +I LC+ K +A+ EM + G
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ + A L +R +PD +YN +++ L + A
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
++E +G T V++ L K
Sbjct: 845 ALFEETRLKGCNIHTKTCVVLLDALHK 871
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 2/280 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P+ LV +L EA + M + K A+ L+ A+ + D
Sbjct: 156 FGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPML 215
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ +M+ +G E + ++ I F + + +LD MK +L ++ YN I
Sbjct: 216 ILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCF 275
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K KV+ +++ EM G PD+ +Y +++ C ++ A+ L ++ + +P
Sbjct: 276 GKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCA 335
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ YN ++ G+FD A + E + +G PSV Y+ ++ L KK+ ++EEA + FE
Sbjct: 336 YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR-RVEEALRIFE 394
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
M + +P T +L + L G L+ + D MER+
Sbjct: 395 EMKRDAVPNV-PTYNILIDMLCREGKLNAALEIRDDMERA 433
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
+++ G+ P++Y + LL AL K + + A F + K + P TYSIL+ GL V +
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 769
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + EM + + + + +++ + KAGNI EA G+ ++ G PD+ SY+
Sbjct: 770 FNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNA 829
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII--RKLCKNEKVEEA 168
I AN + + + + N+ T C++ L K E +E+A
Sbjct: 830 MIEGLSSANKAMDAYALFEETRLKGC--NIHTKTCVVLLDALHKAECLEQA 878
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P+ Y + LC+ K + A F+ K P S L+ G G+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E ++ D M+ P++++ +N L+ +CK G +++A +L+ M ++G +P++ ++ +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C +++ +LD M++ NLVP+ +Y +I LC + + A +LL++M G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y+ ++ + + A RL+ M+ V PD YN ++ L + G+ + A+
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ RG P T+ + G K GK+ EA KYF+ M+D G+ P + +L N
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGY-SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 298
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P I+ + ++ L K ++ A + + P T+ + G G+++EA
Sbjct: 215 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K FDEML+ + + L+ KAGN+ EA + R + ++G PD + S FIH
Sbjct: 275 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +V +K LVP+VFTY+ +I CK +VE+A++L DEM +G P+
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ YNA++ C ++ A +L M ++ + PD TY+ ++ + A ++
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 454
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M +G P Y+ +VHG C K+G +E+A F M+ +G
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCC-KEGDMEKAMNLFREMLQKG 495
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP + K + A ++FD H P Y++L+ G G L EA
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F + D+ ++ + + K G + EA + E++ G PD F+YS I
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ ++ F + D M + PN+F YN ++ LCK+ ++ A +L D M E+G PD
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ +C V A L M + V P YN ++ + G ++A ++
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 489
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++GF ++S ++ ++ G C K K++EA + F+ M+ + I P
Sbjct: 490 EMLQKGFATTLS-FNTLIDGYC-KSCKIQEASQLFQEMIAKQIMP 532
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 20/304 (6%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+ P ++ L+ CK+ V+ A + D P + Y+ LV GL G++
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 412
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
ARKLFD M E+ D + ++++++ CK+ N+ EA + EM S G +P +F Y+ +
Sbjct: 413 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ D+ + M + ++N +I CK+ K++EA QL EMI +
Sbjct: 473 HGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531
Query: 182 PDEWSYNAILAYHCDRAE-----------------VNMALRLITRMTKENVMPDRHTYNM 224
PD +Y ++ +HC + V+ L +M + V PD TY +
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGL 591
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
V+ + A ++ + + +G + + +++ LCK++ L EA K + M +
Sbjct: 592 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE-DLTEASKLLDEMGEL 650
Query: 285 GIPP 288
G+ P
Sbjct: 651 GLKP 654
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
PS +++ LC K + +A++ + P V YS L+ G G + EAR+L
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 207
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D M DI +N+++ + KAG ++EA L E++ G +PDA ++ FI + +
Sbjct: 208 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 267
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + D M + L+PN Y +I K + EA + + G PD +
Sbjct: 268 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 327
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+A + V AL++ + + ++ ++PD TY+ ++ + G ++A E+ + M
Sbjct: 328 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 387
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+G P++ Y+ +V GLC K G ++ A K F+ M ++G+ P S T
Sbjct: 388 LKGIAPNIFIYNALVDGLC-KSGDIQRARKLFDGMPEKGLEPDSVT 432
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV GI ++ + L+H LCK ++ A + P +T+ +L+ G
Sbjct: 71 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L DEM +R +++ +++ +C ++ A+ +L +M G +P+ YS
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + I R+LD M + P++F YN II L K K+EEA L E+ RG
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ A + + ++ A + M +MP+ Y +++ + G A
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
++ + G P V T S +HGL K G+++EA K F + ++G+ P YSS +
Sbjct: 311 SIFRHLHALGVLPDVQTCSAFIHGLLKN-GRVQEALKVFSELKEKGLVPDVFTYSSLI 367
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY +++ L EA KL DE++ + H+ L+ A+CK ++ EA +
Sbjct: 584 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM +G +P + S + +F EA + RV + +K LVP+ T ++
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 703
Query: 162 NEKVEEAYQLLDEMI 176
+ E+A L+ +++
Sbjct: 704 DTDSEDARNLIKQLV 718
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 3/293 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
++ G KP + L+ + + K V+ F++ + + F P V++YSIL+ GL G+
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +F M ++ +D A+N++++ CK+G + +A+ +L EM+ +P +Y
Sbjct: 579 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + + K + NV Y+ +I K +++EAY +L+EM+++G
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N++L E+N AL M + P+ +TY++++ L RV ++++A
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPPYSS 291
W+ M+K+G P+V TY+ M+ GL K G + +A FE + GIP +S
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLA-KVGNITDAYSLFERFKANGGIPDAAS 810
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 38/317 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G+KP ++ LCK + A + F + E + P Y+ ++ G G G +A
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 338
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL + + ER C +++ NS+L + K +DEA + M+ AEP++ +Y+I I
Sbjct: 339 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDM 397
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +R+LD M+ +L PN+ T N ++ +LCK K+EEAY++ + +RG NPD
Sbjct: 398 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 457
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRM--------------------------------- 210
+Y +++ + +V+ A RL +M
Sbjct: 458 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 517
Query: 211 --TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ PD N + + + G ++ ++E + GF P V +YS+++HGL K
Sbjct: 518 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL-TKA 576
Query: 269 GKLEEACKYFEMMVDEG 285
G+ E F M +G
Sbjct: 577 GQARETSNIFHAMKQQG 593
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 140/273 (51%), Gaps = 2/273 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V ++ LVR L G++++A L DE+ DI+ +N ++ KAGN+D A
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E+++ G +PD SY+ I C+A + + M+ VP + YN +I
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+ E+AY+LL+ + ERG P S+N+IL + +V+ AL L M K++ P+ TYN
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYN 392
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ +L GR + A + + ME +P++ T ++MV LCK + KLEEA K FE
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR-KLEEAYKIFESASQ 451
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G P T L + L G +D L +KM
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G PS+ + +L L K++ V A F+ K + P TY+I++ L G + E
Sbjct: 347 ERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEE 406
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ DEM ++L N +++ +CKA ++EA+ + G PD +Y I
Sbjct: 407 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 466
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ + +R+ + M N Y +IR + + E+ +++ E+I RG P
Sbjct: 467 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 526
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D N + EV + + +PD +Y++++ L + G+ + ++
Sbjct: 527 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 586
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+M+++GF Y+ +V G C K GK+ +A + E M ++ + P +T + + L
Sbjct: 587 HAMKQQGFALDARAYNAVVDGFC-KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 645
Query: 303 LGFLD 307
+ LD
Sbjct: 646 IDRLD 650
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ ++ CK V A++ + K + PTV TY +V GL + L EA LF+E
Sbjct: 602 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 661
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ ++++ ++SL++ K G IDEA+ +L EM G P+ ++++ + A +A +I+
Sbjct: 662 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 721
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
SMK PN +TY+ +I LC+ +K +A+ +M ++G P+ +Y +++
Sbjct: 722 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMIS 781
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ A L R +PD ++N +++ + R A +V+E RG
Sbjct: 782 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRG 838
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 41/299 (13%)
Query: 59 ELSEARKLFDEM--LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+L+ K+ +EM L P AH L A+ +A +D+A + MR + P +
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQACAH--LAAALVRARRLDDAVLAVAVMRRLKFRPAFSA 181
Query: 117 YSIFIHAFCEA-----------------------------------NDIHSVFRVLDSMK 141
Y++ I A EA + ++D +K
Sbjct: 182 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 241
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
L P++ YN I K V+ A++ E+ +G PD+ SY +++ C +
Sbjct: 242 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 301
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A L +M E +P + YN ++ GRF+ A ++ E + +RG PSV +++ ++
Sbjct: 302 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 361
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
L KK+ K++EA FE+M + P SST ++ + L G ++ + D+ME ++
Sbjct: 362 TCLGKKR-KVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 418
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+ P++Y + LL AL K + + A F + K + P TYSIL+ GL V +
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + +M ++ +++ + +++ + K GNI +A+ + ++ G PDA S++
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
I AN ++V + + N+ + ++ L K+E +E+A
Sbjct: 814 LIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 2/277 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E I P ++ L+H LCK + VA Q FD + P T++ L+ G
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + +ML D++ +N+LL +CK G++++A ++ EMR +G +PD +Y+
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTT 403
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ D+ S + M +V + + +I C++ +V +A + L EM+E G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ +C + V M +L+ M P TYN+++ L + G+ A
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ E+M G P TY++++ G C K GK E+ K
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHC-KNGKAEDLLK 559
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G++P+ + L++ LCK +++ + + + P V TYS+L+ GL G L A
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDEM +R + + +L++ C++ ID A +M ++G +PD Y+ ++
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D++ +++D M+ + P+ TY +I CK +E A ++ M E G D
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ A+++ C V A R + M + + PD TY MV+ + G ++ +
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+ G P V TY+V+++GLC K+G+++ A E M++ G+ P T +L
Sbjct: 493 EMQINGHKPGVITYNVLMNGLC-KQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 144/286 (50%), Gaps = 4/286 (1%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
Y LD+++++ V + + + ++ F P V+ Y+IL+ G + +A+ +F+E+
Sbjct: 193 YLLDKMINS---NSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI 249
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+R ++ N+L+ +CK+ N+DE + + M PD F+YS+ IH C+ +
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
++ D M++ L PN T+ +I C++ +++ A +M+ G PD YN +
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTL 369
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
L C +VN A +L+ M + PD+ TY ++ + G + A E+ + M + G
Sbjct: 370 LNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ++ G C + G++ +A + MV+ G+ P +T M+
Sbjct: 430 VLDNVAFTALISGFC-RDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 146/317 (46%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
++E+G P + + L++ CK ++ A F+ K PT +++ L+ GL
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M E + D+ ++ L+ +CK G +D A + EM+ G P+ +++
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + I S M + P++ YN ++ LCK V +A +L+DEM G
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ +C ++ A+ + M +E V+ D + ++ R GR A
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
M + G P +TY++++ G C KKG ++ K + M G P T +L N
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYC-KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 300 LVGLGFLDIIEILADKM 316
L G + +L + M
Sbjct: 513 LCKQGQMKNANMLLEAM 529
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+KP + + LL+ LCK V A + D + P TY+ L+ G G+
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGD 413
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ M E +D +A +L+ C+ G + +A LREM G +PD +Y++
Sbjct: 414 LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTM 473
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ ++ F++L M+ P V TYN ++ LCK +++ A LL+ M+ G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRL 206
PD+ +YN +L HC + L+L
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
++L+ A +G + +A R +R+ + + +N +++ +
Sbjct: 157 DALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILE 216
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
Y P V YN +I K CK + +A + +E+ +RG P S+N ++ C ++
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
RL M + + PD TY++++ L + GR D A ++++ M++RG P+ T++ ++
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G C+ + +++ A + M+ G+ P L N L +G ++ L D+M
Sbjct: 337 GQCRSR-RIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 89/256 (34%), Gaps = 60/256 (23%)
Query: 87 EAMCKAGNIDEAHGMLREMRSI------------------------GAEPDAFSYSIFIH 122
++ C N AH M +E +SI G F + +
Sbjct: 102 QSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMI 161
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A+ ++ + + ++ N ++ K+ + + E++E G P
Sbjct: 162 AYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPP 221
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YN ++ C + A + + K + P ++N ++ L + D +
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++ME+ YP V TYSV++HGLCK+
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKE----------------------------------- 306
Query: 303 LGFLDIIEILADKMER 318
G LD+ E L D+M++
Sbjct: 307 -GRLDVAEQLFDEMQQ 321
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 150/293 (51%), Gaps = 8/293 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G +P+ +L+ +CK +A + + YSI++ GL G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF+EM + DI+ +N+L+ C AG D+ +LR+M P+ ++S+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +F + + ++L M + + PN TYN +I CK ++EEA Q++D MI +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++N ++ +C ++ L L M+ V+ + TYN +++ + G+ + A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF------EMMVDEGI 286
++++ M R P + +Y +++ GLC G+LE+A + F +M +D GI
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLC-DNGELEKALEIFGKIEKSKMELDIGI 510
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G K I + L+ C + D K + +P V T+S+L+ G+L EA
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM++R + + +NSL++ CK ++EA M+ M S G +PD +++I I+
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M ++ N TYN +++ C++ K+E A +L EM+ R PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY +L CD E+ AL + ++ K + D Y +++ + + D A +++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G Y++M+ LC+K L +A F M +EG P T +L
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKD-SLSKADILFRKMTEEGHAPDELTYNIL 584
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P + LL+ LC V A + D + PT+ T + LV GL G+
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A L D M+E + + + +L MCK+G A +LR+M + DA YSI
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + F + + M+ ++ TYN +I C + ++ +LL +MI+R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +++ ++ ++ A +L+ M + + P+ TYN ++ + R + A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M +G P + T++++++G CK ++++ + F M G+ + T L
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKAN-RIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 300 LVGLGFLDIIEILADKM 316
G L++ + L +M
Sbjct: 448 FCQSGKLEVAKKLFQEM 464
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 140/282 (49%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P+ + L+ CK ++ A Q D P + T++IL+ G
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R + + +N+L++ C++G ++ A + +EM S PD SY I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ ++ + +++ + ++ Y II +C KV++A+ L + +G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN +++ C + ++ A L +MT+E PD TYN++++ + A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+ E M+ GF VST ++++ L G+L+++ + +M+
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINML--SSGELDKS--FLDML 636
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 2/309 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
D+L L K F D + PTV ++ L + + L +M +
Sbjct: 58 DKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK 117
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
I + ++ C+ + A + ++ +G EPD ++ ++ C +
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
++D M P + T N ++ LC N KV +A L+D M+E G P+E +Y +L
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + +A+ L+ +M + N+ D Y++++ L + G D A ++ ME +GF
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEIL 312
+ TY+ ++ G C G+ ++ K M+ I P T +L + V G L + ++L
Sbjct: 298 IITYNTLIGGFC-NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 313 ADKMERSTS 321
+ M+R +
Sbjct: 357 KEMMQRGIA 365
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+PS+ + +++ LCK+ V+ A + +++ P TY+ L+ G
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +FD M++ C + + +++L+ +C G ++EA ML EM G EP ++Y+I
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C+A +L MK+ VPN+ T+ +I L ++ K E A L +M+ G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNA++ C A + M +P TYN ++K +G +A
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ M K G P+V TY+ +++G C K+G L A + E+M G+ P
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYC-KQGNLNNAMRLLEIMKGNGLKP 480
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 153/307 (49%), Gaps = 4/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L++ LC + A F H P+ +TY+ +++ +G+
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +FD+ML+ +++ +N+L+ CK GN++ A +L M+ G +PDA++Y+
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + M + + PN TY II KV++A L +M+E G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN +++ ++ A +M K+ ++P+ TY + L R GR A
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY--FEMMVDEGIPPYSSTVEMLR 297
+++ MEKR ++P++ TYS +++GLC ++G+ E+A Y + G P T L
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLC-QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 298 NRLVGLG 304
L G G
Sbjct: 667 KGLCGEG 673
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 158/323 (48%), Gaps = 17/323 (5%)
Query: 26 VKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
VK QF N+K++F T+ +++ L+ LG + AR ++ +ML +L N
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFN 206
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+++ +CK G + EA ++ + A P+AF+Y+ I C +++ F + D M +
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD 266
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
PN TY+ +I LC ++EEA +L+EM+++G P ++Y L CD + A
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L+ +M K +P+ T+ ++ L R G+F+ A ++ M G P+ TY+ +++
Sbjct: 327 VELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQ 386
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS-- 321
LC +G+ E A F+ M+ G P + T + +G + ++ DKM ++ S
Sbjct: 387 LC-VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 322 ------------CTIQELANAMR 332
C L NAMR
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMR 468
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 7/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ GI+P++Y L +LC A + K P ++T++ L+ GL G+
Sbjct: 298 MVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK 357
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L+ +ML + +N+L+ +C G + A + + M S G+ P +Y+
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC DI + D M + PNV TYN +I CK + A +LL+ M G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD W+Y +++ ++ A L M + + P+ TY ++ + + D A
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++ M + G PS TY+VM+ G K + EA + MV +G+ P Y+S ++
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGF-SKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 296 L-RNRLVGLGF 305
L RN GL F
Sbjct: 597 LCRNGRTGLAF 607
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G P+ L++ LC ++ A + + PTV TY+I + L D G
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA +L +M +R C +I +L+ + + G + A G+ +M + G P +Y+
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + F + M + +P+ TYN II+ C +++A + D+M++ G
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
++P+ +YN ++ +C + +N A+RL+ M + PD TY ++ R G+ + AT
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + G P+ TY+ ++ G K+++A F MV+ G P S T ++
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYF-NLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 6/307 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P+ ++ V A F+ + P+ +TY++++ G
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +M+++ +++ + S ++ +C+ G A + EM P+ ++YS
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627
Query: 120 FIHAFCE---ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I+ C+ A D ++ +L + Y PNV TY +++ LC + EA QL+ M
Sbjct: 628 LIYGLCQEGRAEDAE-MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQ 686
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
++G P E Y A+L C +V AL + M Y ++ L + +
Sbjct: 687 KKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIE 746
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++++M ++ + ++V++ GL K+G+ + K +M T ML
Sbjct: 747 EAQCIFQTMLEKHWNSDEVAWTVLLDGLL-KEGETDLCLKLLHVMESRNCTLNFQTYVML 805
Query: 297 RNRLVGL 303
L L
Sbjct: 806 ARELSAL 812
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 150/298 (50%), Gaps = 3/298 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MV G+KP++Y L+ LCK + A + F + P V TY++++ G G
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ A L M+E+ + + +L++ C+ G+ D A ++ +M+ G P+ ++Y+
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYN 396
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+ I ++VL L P+ TY +I + CK + A L ++M E
Sbjct: 397 AIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN 456
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+PD +Y I+A +C + ++ + +L + ++P + TY ++ RVG+ A
Sbjct: 457 SCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSA 516
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V+E M + G P TY ++ GLCK+ +LEEA FE M+D+ + P T L
Sbjct: 517 LKVFERMVQHGCLPDPITYGALISGLCKES-RLEEARALFETMLDKHMVPCDVTCVTL 573
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 19 ALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
L +R H A Q FD P +++ LV G G EA L M +D
Sbjct: 158 GLRQRHHFAHARQAFDGMG--VRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLD 215
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++ A C+ G + G+ M +G P+ +Y+ ++ C+ + F VL+
Sbjct: 216 SATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLE 275
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDR 197
M L PNV+T+ +I LCK E A++L ++++ + P+ +Y ++ +C
Sbjct: 276 EMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE 335
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
++ A L+ RM ++ + P+ +TY ++ R G FDRA E+ M+ GF P++ TY
Sbjct: 336 GKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTY 395
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ G C KKGK+++A K M +G+ P T ML
Sbjct: 396 NAIIGGFC-KKGKIQQAYKVLRMATSQGLCPDKVTYTML 433
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+IY + ++ CK+ ++ A++ A + P TY++L+ G ++ A
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYA 446
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF++M E C DI + +++ C+ ++++ + + SIG P +Y+ I
Sbjct: 447 LDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAG 506
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C S +V + M ++ +P+ TY +I LCK ++EEA L + M+++ P
Sbjct: 507 YCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPC 566
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ + + +C R + +A+ + + K H + +++ L V D A+ +
Sbjct: 567 DVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQ---QAHAADALVRKLSAVDNLDAASLFLK 623
Query: 244 SMEKRGFYPSVSTYSVMVH 262
++ + + +TY+ ++
Sbjct: 624 NVLDKHYAVDHATYTSFIN 642
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 2/212 (0%)
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
+G PDA S+ + C+ +L +M R + T ++R C+ +
Sbjct: 174 GMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFR 233
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+ L M+E G P+ +Y A + C R V A ++ M + + P+ +T+ ++
Sbjct: 234 DVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLI 293
Query: 227 KLLVRVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L ++G +RA ++ + K Y P+V TY+VM+ G CK+ GKL A MV++G
Sbjct: 294 DGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE-GKLARAEMLLGRMVEQG 352
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ P ++T L + G D L +KM+
Sbjct: 353 LAPNTNTYTTLIDGHCRGGSFDRAFELMNKMK 384
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 163/317 (51%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G P ++ L +++ A FFD+ K F P V Y+ LVRG GE+
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA K+F EM ++ ++ +++A+C+ G I AH + +M G P+A +++
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MK+ P+ TYN +I C++E +E A ++L+ MI++
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ ++N I Y + +VN A R+ ++M + P+ TYN+++++ V D +
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLK 451
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M+ + P+V+TY ++V C G A K F+ MV+E + P S EM+ +
Sbjct: 452 MKKEMDDKEVEPNVNTYRLLVTMFC-GMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 511 LRRAGQLKKHEELVEKM 527
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ ++ G V + A L D M R + I L+ +AG EA M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKV 165
G PD ++SI I DS+K R+ P+V Y ++R C+ ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE--PDVIVYTNLVRGWCRAGEI 271
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA ++ EM G P+ ++Y+ ++ C +++ A + M P+ T+N +
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+++ V+ GR ++ +V+ M+K G P TY+ ++ C+ + LE A K M+ +
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN-LENAVKVLNTMIKKK 390
Query: 286 IPPYSST 292
+ST
Sbjct: 391 CEVNAST 397
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +F + P + ++LLH L K +A FF D +P+V TY++++ L G+
Sbjct: 207 MNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGD 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR LF+EM + DI+ +NSL++ K G + A + EM+ G EPD +Y+
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNS 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I F L MK+ L PNV TY+ +I CK + EA + +MI G
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E++Y +++ +C ++N A +L + M + V + TY +L L GR A
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ ++ K G+ + Y+ + HG K K +E+A E M + + P
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAK-MMEKAMDILEEMNKKNLKP 494
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 2/291 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+ PS++ + ++ L + ++ A F+ K + P + TY+ L+ G G VG
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +F+EM + C D++ +NSL+ CK I +A L M+ G +P+ +YS
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC+A + + M R L PN FTY +I CK + EA++L EM + G
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N + +Y A+L C+ + A L + K ++ Y + ++ ++A
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
++ E M K+ P + Y + GLC++ ++E++ M+D G+ S
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQN-EIEDSMAVIREMMDCGLTANS 531
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 158/321 (49%), Gaps = 18/321 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G++P++ L+ A CK + A++FF D + P TY+ L+ +G+
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA KL EM + ++I+ + +LL+ +C+ G + EA + + G + Y+
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
H + +A + +L+ M + NL P++ Y I LC+ ++E++ ++ EM++ G
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ + Y ++ + + A+ L+ M + TY +++ L ++G +A
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE- 294
++ M + G P++ Y+ ++ GLCK LEEA F M+D+GI P Y+S ++
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDC-LEEAKNLFNEMLDKGISPDKLVYTSLIDG 645
Query: 295 -----------MLRNRLVGLG 304
LRNR+V +G
Sbjct: 646 NMKHGNPGEALSLRNRMVEIG 666
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 132/280 (47%), Gaps = 2/280 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P D L + L ++ A Q F+ K P V++ + L+ L + A
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F +M+ + +N ++ + + G+++ A + EM++ G PD +Y+ I +
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + V + MK P+V TYN +I CK E++ +A++ L M +RG P+
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+ ++ C + A + M + + P+ TY ++ ++G + A ++ M
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ G ++ TY+ ++ GLC + G++ EA + F ++ G
Sbjct: 418 QQAGVNLNIVTYTALLDGLC-EDGRMREAEELFGALLKAG 456
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L H K K ++ A + K P + Y + GL E+ ++ + EM++
Sbjct: 466 SLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDC 525
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+ + +L++A K G EA +L+EM+ +G + +Y + I C+ +
Sbjct: 526 GLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQA 585
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
R D M R L PN+ Y +I LCKN+ +EEA L +EM+++G +PD+ Y +++
Sbjct: 586 VRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDG 645
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ AL L RM + + D Y ++ R G+ A + + M ++G P
Sbjct: 646 NMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIP 704
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 140/321 (43%), Gaps = 6/321 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G+ +I LL LC+ ++ A + F K +T + Y+ L G
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + +EM ++ D+L + + + +C+ I+++ ++REM G +++ Y+
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + +L M+ + V TY +I LCK V++A + D M G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y A++ C + A L M + + PD+ Y ++ ++ G A
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL 656
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + G + Y+ ++ G + G+++ A + M+ +GI P L +
Sbjct: 657 SLRNRMVEIGMELDLCAYTSLIWGF-SRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRK 715
Query: 300 LVGLGFLDIIEILA--DKMER 318
LG DI E LA D M R
Sbjct: 716 YYELG--DINEALALHDDMAR 734
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 153/287 (53%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P++ + +++ LCK + + A + F+ K TY+ L+ GL + G
Sbjct: 711 MAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGR 770
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +L +M++RK +++ +L++ K GN+ EA + +EM P+ +Y+
Sbjct: 771 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNS 830
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + + D M P+V TYN +I CK+++VE+ +L EM +G
Sbjct: 831 LINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN ++ +C ++N+A ++ RM V PD TYN++L L G+ ++A
Sbjct: 891 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ E ++K + TY++++ G+C+ K++EA F + +G+
Sbjct: 951 VMVEDLQKNQMDVDIITYNIIIQGMCRND-KVKEAWCLFRSLTRKGV 996
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 3/298 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MV+ G +P++ + L+ LCK V +A + + K + TY+ L+ GL G
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG 220
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
E +A ++ +M +R+ D+ +L++A K GN+DEA + ++M P+ +Y+
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C ++ + D M PNV TYN +I CK+ +VE+ +L M
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G D ++YN ++ +C ++ +A + + M V PD T+ ++L L G A
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M Y + Y++M+HGLCK K+EEA + F + EG+ P + T ++
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKAD-KVEEAWELFCRLPVEGVKPDARTYTIM 457
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI +Y L+H C+ +A K F P++ T L+ G
Sbjct: 641 MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L D M E +++ +N+++ +CK +++ A + M G DA +Y+
Sbjct: 701 FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + R+L M + + PNV + +I K + EA L EMI R
Sbjct: 761 LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN+++ C + + A + M + PD TYN ++ + R +
Sbjct: 821 VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G TY+ ++HG C+ GKL A K F MVD G+PP T +L +
Sbjct: 881 KLFCEMTHQGLVGDAFTYNTLIHGYCQA-GKLNVAQKVFNRMVDCGVPPDIVTYNILLDC 939
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ ++ + ++++
Sbjct: 940 LCNNGKIEKALVMVEDLQKN 959
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 144/288 (50%), Gaps = 3/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ PS+ D +LL A+ + + F + + + +++IL+
Sbjct: 56 MVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSR 115
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A + +M++ I+ SLL C I +A ++ M G EP+ Y+
Sbjct: 116 LSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNT 175
Query: 120 FIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ D++ +L+ M K+ L ++ TYN ++ LC + + +A ++L +M +R
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
NPD +++ A++ + ++ A L +M + ++ P+ TYN ++ L GR A
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA 295
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ ++ M +G +P+V TY+ +++G CK + ++E+ K F+ M EG+
Sbjct: 296 KKTFDLMASKGCFPNVVTYNTLINGFCKSR-RVEDGMKLFQRMYREGL 342
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 1/258 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P++ L+ K ++ A + + + P + TY+ L+ G G
Sbjct: 781 MVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGR 840
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+ +FD M+ + C D++ +N+L+ CK+ +++ + EM G DAF+Y+
Sbjct: 841 LGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNT 900
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH +C+A ++ +V + M + P++ TYN ++ LC N K+E+A +++++ +
Sbjct: 901 LIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQ 960
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN I+ C +V A L +T++ V D Y ++ L R G A
Sbjct: 961 MDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREAD 1020
Query: 240 EVWESMEKRGFYPSVSTY 257
++ M++ GF PS Y
Sbjct: 1021 KLCTRMKEDGFMPSERIY 1038
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A LF EM++ + ++ LL A+ + ++M G D +S++I I
Sbjct: 48 DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI 107
Query: 122 HAFCEA-----------------------------------NDIHSVFRVLDSMKRYNLV 146
H FC N IH F ++ SM +
Sbjct: 108 HCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE 167
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG-ANPDEWSYNAILAYHCDRAEVNMALR 205
PNV YN +I LCKN V A +LL+EM ++G D +YN +L C E A R
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAAR 227
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ MTK + PD T+ ++ V+ G D A E+++ M + P+ TY+ +++GLC
Sbjct: 228 ILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLC 287
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G+L A K F++M +G P T L N
Sbjct: 288 -MHGRLYHAKKTFDLMASKGCFPNVVTYNTLIN 319
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M+ + P+I + L++ C + + A FD +K F P V TY+ L+ G
Sbjct: 816 MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCF-PDVVTYNTLITGFCKSK 874
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ + KLF EM + D +N+L+ C+AG ++ A + M G PD +Y+
Sbjct: 875 RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN 934
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + C I +++ +++ + ++ TYN II+ +C+N+KV+EA+ L + +
Sbjct: 935 ILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRK 994
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G D +Y +++ C A +L TRM ++ MP Y+ L+
Sbjct: 995 GVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 3/286 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ +A LF EML+ + I+ +L A+ K D + +M ++G D +S++
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I IH FC + +L M + P++ T ++ C+ + +EA L+D M E
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ YN ++ C ++N AL + M K+ ++ D TYN ++ L GR+ A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M KR P+V ++ ++ K+G L EA ++ M+ + P T L N
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFV-KEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEE 344
G L + + D M S C ++ TGF KS+ E
Sbjct: 834 GFCIQGRLGDAKHMFDLMV-SKGC-FPDVVTYNTLITGFCKSKRVE 877
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P ++ L+ A K+ ++ A + + + P TY+ L+ GL G L A+
Sbjct: 237 INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAK 296
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K FD M + C +++ +N+L+ CK+ +++ + + M G D F+Y+ IH +
Sbjct: 297 KTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY 356
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + M + P++ T+ ++ LC N ++ A ++M
Sbjct: 357 CQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGI 416
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ C +V A L R+ E V PD TY +++ L + G A E++
Sbjct: 417 VAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRR 476
Query: 245 MEKRG 249
M++ G
Sbjct: 477 MKEDG 481
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 8/269 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P+ + L++ LC + A + FD A P V TY+ L+ G
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR 326
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + KLF M D +N+L+ C+ G + A + M S G PD ++ I
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C +I S + M+ + YN +I LCK +KVEEA++L + G
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD-------RHTYNMVLKLLVRV 232
PD +Y ++ C A L RM ++ ++ H N + L +
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTII 506
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMV 261
R + ES + +Y + +S +V
Sbjct: 507 ICPKRRRSIMESGDLYYYYSDTTLWSSLV 535
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + L+ CK K V+ + F H+ TY+ L+ G G+
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+K+F+ M++ P DI+ +N LL+ +C G I++A M+ +++ + D +Y+I
Sbjct: 911 LNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNI 970
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + + S+ R + + Y +I LC+N EA +L M E G
Sbjct: 971 IIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030
Query: 180 ANPDEWSYNAILAYH 194
P E Y+ L H
Sbjct: 1031 FMPSERIYDETLRDH 1045
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 6/241 (2%)
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
++A + EM P ++ + A +V M+ + + +++++ +
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I C+ ++ A +L +M++ G +P ++ ++L C R ++ A L+ M K
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG-FYPSVSTYSVMVHGLCKKKGKLEEA 274
P+ YN ++ L + G + A E+ MEK+G + TY+ ++ GLC G+ +A
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC-YSGEWRQA 225
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST----SCTIQELANA 330
+ M I P T L + V G LD + L +M +S+ + T L N
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285
Query: 331 M 331
+
Sbjct: 286 L 286
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+ E+A L EM++ P + +L + + +M + D +++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R R A + M K G+ PS+ T+ ++HG C + ++ +A MV
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRN-RIHDAFSLVASMVK 163
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
G P L + L G ++I L ++ME+
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK 198
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 35/341 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G P I ++ +CK H++VAH+ + + P V Y+ L++GL
Sbjct: 325 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 384
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +L EM ++ CP+D + N L++ C+ G +D +L +M G PD +Y+
Sbjct: 385 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 444
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC E+ +A L+ +MI++G
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ D A
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 564
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E+ M +G P+ YS + L +
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 624
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K+G+ E A ++ MV G P ST +L L GF+
Sbjct: 625 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 665
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + + +L+A+C + V A H D P V +Y+ +++GL
Sbjct: 224 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 283
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L +EM+ CP +I+ N+L+ +C+ G + H +L +M G PD Y+ I
Sbjct: 284 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 343
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + +L+ M Y L PNV YN +++ LC E+ EE +LL EM ++ D
Sbjct: 344 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 403
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ ++N ++ + C V+ + L+ +M + MPD TY V+ + G D A + +
Sbjct: 404 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 463
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
SM G P+ +Y++++ GLC + + +A M+ +G P T L N L
Sbjct: 464 SMTACGCKPNTISYTIVLKGLCSAE-RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522
Query: 304 GFLD-IIEILADKMERSTS 321
G ++ IE+L + S
Sbjct: 523 GLVEQAIELLKQMLVNGCS 541
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 37/319 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ ALC R + A D + P Y +++ G A
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ +++ R C +D+ N +L A+C G++DEA +LR++ S G EPD SY+ +
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V +++ M R PN+ T+N +I LC+N E +++L +M+E G PD
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN +LK L R+
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M + G P V TY+ +++G C K+G
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC-KEG 453
Query: 270 KLEEACKYFEMMVDEGIPP 288
++EA + M G P
Sbjct: 454 LIDEAVMLLKSMTACGCKP 472
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P + +++ CK + A + P +Y+I+++GL
Sbjct: 430 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 489
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L +M+++ CP++ + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 490 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + ++ + Q+ D + +
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 609
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E A+ + M +P+ TY ++++ L G A
Sbjct: 610 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669
Query: 240 EVWESMEKRG 249
E+ + +G
Sbjct: 670 EMLTELCSKG 679
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ +V G G+L AR+L + P + + ++ A+C G I +A +L EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G P Y + + A C S RVL+ + +V N ++ +C V+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA LL ++ G PD SYNA+L C L+ M + P+ T+N ++
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L R G F+R EV M + G P + Y+ ++ G+C K+G LE A + M G+
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC-KEGHLEVAHEILNRMPSYGL 365
Query: 287 PP 288
P
Sbjct: 366 KP 367
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 151/341 (44%), Gaps = 35/341 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P I ++ +CK H+KVAH+ + + P V Y+ L++GL
Sbjct: 288 MAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +L EM ++ CP+D + N L++ C+ G +D +L +M G PD +Y+
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTT 407
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC E+ +A L+ +MI++G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ D A
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E+ M +G P+ YS + L +
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K+G+ E A ++ MV G P ST +L L GF+
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + + +L+A+C + V K H D P V +Y+ +++GL
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L +EM+ CP +I+ N+L+ +C+ G + H +L +M G PD Y+ I
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG 306
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + +L+ M Y L PNV YN +++ LC E+ EE +LL EM ++ D
Sbjct: 307 ICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ ++N ++ + C V+ + L+ +M MPD TY V+ + G D A + +
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
SM G P+ +Y++++ GLC + + +A M+ +G P T L N L
Sbjct: 427 SMTACGCKPNTISYTIVLKGLCSAE-RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 304 GFLD-IIEILADKMERSTS 321
G ++ IE+L + S
Sbjct: 486 GLVEQAIELLKQMLVNGCS 504
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 37/319 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ ALC R + A D + P Y +++ G A
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ +++ R C +D+ N +L A+C G++D+A +LR++ S G EPD SY+ +
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V +++ M R PN+ T+N +I LC+N E +++L +M E G PD
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN +LK L R+
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M G P V TY+ +++G C K+G
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFC-KEG 416
Query: 270 KLEEACKYFEMMVDEGIPP 288
++EA + M G P
Sbjct: 417 LIDEAVMLLKSMTACGCKP 435
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P + +++ CK + A + P +Y+I+++GL
Sbjct: 393 MLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L +M+++ CP++ + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + ++ + Q+ D + +
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E A+ + M +P+ TY ++++ L G A
Sbjct: 573 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632
Query: 240 EVWESMEKRG 249
E+ + +G
Sbjct: 633 EMLTELCSKG 642
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ +V G G+L AR+L + P + + ++ A+C G I +A +L EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G P Y + + A C S RVL+ + +V N ++ +C V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+A LL ++ G PD SYNA+L C L+ M + P+ T+N ++
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L R G F+R EV M + G P + Y+ ++ G+C K+G L+ A + M G+
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGIC-KEGHLKVAHEILNRMPSYGL 328
Query: 287 PP 288
P
Sbjct: 329 KP 330
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M G KP+ +L LC + A + P T++ L+ L G
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L +ML C D+++++++++ + KAG DEA +L M + G P+ YS
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
A I+ V ++ D+++ + + YN +I LCK + E A + L M+ G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+E +Y ++ V A ++T + + +
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 157/301 (52%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ + ++LLH LCK+ VK + D K P + TY+ ++GL GE
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ ++++ D++ +N L+ +CK EA L ++ + G EPD+F+Y+
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + R+L + VP+ FTY +I LC + A L +E + +G
Sbjct: 327 LIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN ++ ++ + A +L + M+++ ++P+ T+N+++ L ++G A
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M +G++P + T+++++HG + K+E A + ++M+D G+ P T L N
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQL-KMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 300 L 300
L
Sbjct: 506 L 506
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 161/330 (48%), Gaps = 4/330 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ LC A F+ A + P V Y+ L++GL + G + EA
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ ++ N L+ +CK G + +A G+++ M S G PD F+++I IH
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + +LD M + P+V+TYN ++ LCK K E+ + M+E+G P+
Sbjct: 471 YSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPN 530
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N +L C +++ AL L+ M ++V PD T+ ++ + G D A ++
Sbjct: 531 LFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 244 SMEKRGFYP-SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
ME+ S TY++++H +K + A K F+ MVD + P T ++ +
Sbjct: 591 KMEEVYMVSCSTPTYNIIIHAFTEKL-NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 303 LGFLDI-IEILADKMERSTSCTIQELANAM 331
G +D+ + L + ME ++ L +
Sbjct: 650 TGNVDLGYKFLLEMMENGFIPSLTTLGRVI 679
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
GI P +Y + + C+ A + +N + V Y +V G + E
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF +ML + + N LL +CK G++ E +L ++ G P+ F+Y+ FI
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ + R++ + P+V TYN +I LCKN K +EA L +++ G PD
Sbjct: 261 LCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPD 320
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++A +C V +A R++ +PD TY ++ L G +RA ++
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+G P+V Y+ ++ GL +G + EA + M ++G+ P T +L N L +
Sbjct: 381 EALGKGIKPNVILYNTLIKGL-SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 304 G 304
G
Sbjct: 440 G 440
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 128/251 (50%), Gaps = 1/251 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y ++ G G++ EA +F+ M C + ++N+++ + +G D+AH + M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R G PD +S++I + +FC + H+ R+L++M NV Y ++ +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+E Y+L +M+ G + ++N +L C + +V +L+ ++ K V+P+ TYN
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L + G D A + + +G P V TY+ +++GLCK K +EA Y +V+EG
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNS-KFQEAEVYLGKLVNEG 316
Query: 286 IPPYSSTVEML 296
+ P S T L
Sbjct: 317 LEPDSFTYNTL 327
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 158/328 (48%), Gaps = 8/328 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGL--GDV 57
+++ G KP + + L++ LCK + A + +E P TY+ L+ G G +
Sbjct: 277 LIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGM 336
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+L+E R L + + P D + SL++ +C G + A + E G +P+ Y
Sbjct: 337 VQLAE-RILVNAVFNGFVP-DEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I I ++ M L+P V T+N ++ LCK V +A L+ MI
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G PD +++N ++ + + ++ AL ++ M V PD +TYN +L L + +++
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
E +++M ++G P++ T+++++ LC+ KL++A E M ++ + P + T L
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYH-KLDKALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 298 NRLVGLGFLDIIEILADKMERS--TSCT 323
+ G LD L KME SC+
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEVYMVSCS 601
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + + L++ LCK V A + P + T++IL+ G +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ D M++ D+ +NSLL +CK ++ + M G P+ F+++I
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE-R 178
+ + C + + +L+ MK ++ P+ T+ +I CKN ++ AY L +M E
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ +YN I+ ++ V MA +L M + PD +TY +++ + G D
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M + GF PS++T +++ LC + ++ EA MV +G+ P
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVED-RVYEAAGIIHRMVQKGLVP 705
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P +Y + LL+ LCK K+ V + + P + T++IL+ L +
Sbjct: 487 MMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHK 546
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
L +A L +EM + D + +L++ CK G++D A+ + R+M + +Y+
Sbjct: 547 LDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYN 606
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I IHAF E ++ ++ M L P+ +TY ++ CK V+ Y+ L EM+E
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMEN 666
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
G P + ++ C V A +I RM ++ ++P+
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TY II KL K E ++L +M + G + E Y + + + +V A+ + R
Sbjct: 42 TYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M + P +YN ++ +LV G FD+A +V+ M RG P V ++++ + C+
Sbjct: 102 MDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCR 158
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 38/154 (24%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEA 63
+ P L+ CK + A+ F + + + + TY+I++ + ++ A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMA 621
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNID--------------------------- 96
KLF EM++R D + +++ CK GN+D
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 97 --------EAHGMLREMRSIGAEPDAFSYSIFIH 122
EA G++ M G P+A + +IF H
Sbjct: 682 LCVEDRVYEAAGIIHRMVQKGLVPEAVN-TIFDH 714
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 154/304 (50%), Gaps = 7/304 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
EFG P++ L+ CK+ ++ A FF+ K TY++L+ GL G
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ +++++M E ++ +N ++ +CK G +A + EMR G + +Y+ I
Sbjct: 251 QGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + V+D MK + PN+ TYN +I C K+ +A L ++ RG +
Sbjct: 311 GGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLS 370
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN +++ C + + + A +++ M + + P + TY +++ R ++A ++
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
SME+ G P V TYSV++HG C KG++ EA + F+ MV++ P E++ N +V
Sbjct: 431 RSSMEELGLTPDVHTYSVLIHGFC-IKGRMNEASRLFKSMVEKKFEPN----EVIYNTMV 485
Query: 302 GLGF 305
LG+
Sbjct: 486 -LGY 488
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 153/296 (51%), Gaps = 1/296 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G P + LL + FF+ +K + V ++ I+++G + GE+
Sbjct: 120 MVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEI 179
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++ L E+ E +++ + +L++ CK G I++A + EM G + ++Y++
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVL 239
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH + F + + M+ + + PN+ TYNC++ +LCK+ + ++A+++ DEM ERG
Sbjct: 240 IHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGV 299
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ + +YN ++ C + N A ++ +M + + P+ TYN ++ V + +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALS 359
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ RG PS+ TY+++V G C KKG A K + M + GI P T +L
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFC-KKGDTSGAGKVVKEMEERGIKPSKVTYTIL 414
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P+++ + +++ LCK K A + FD + + + TY+ L+ GL +
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA ++ D+M +++ +N+L++ C + +A + R+++S G P +Y+I
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ D +V+ M+ + P+ TY +I +++ +E+A QL M E G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C + +N A RL M ++ P+ YN ++ + G RA
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ME++ P+V++Y M+ LCK++ K +EA E M+D GI P S + ++
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKER-KSKEAEGLVEKMIDSGIGPSDSILNLI 554
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M +FG+ + + L+H L K K + ++ + H P + TY+ ++ L G
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A K+FDEM ER +I+ +N+L+ +C+ +EA+ ++ +M+S G P+ +Y+
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + +K L P++ TYN ++ CK A +++ EM ERG
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + +Y ++ + A++L + M + + PD HTY++++ GR + A+
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++SM ++ F P+ Y+ MV G C K+G A + F M ++ +PP
Sbjct: 464 RLFKSMVEKKFEPNEVIYNTMVLGYC-KEGSSYRALRLFREMEEKELPP 511
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 55/297 (18%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLL--------------------EAMCKAGNIDEAHG 100
S A+ L +++ K +SLL A ++ ++D +
Sbjct: 56 SHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIY 115
Query: 101 MLREMRSIGAEP----------------------------------DAFSYSIFIHAFCE 126
EM G P D +S+ I I CE
Sbjct: 116 YFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCE 175
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A +I F +L ++ + PNV Y +I CK ++E+A L EM + G +EW+
Sbjct: 176 AGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWT 235
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ + +M + V P+ HTYN V+ L + GR A +V++ M
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+RG ++ TY+ ++ GLC++ K EA + + M +GI P T L + G+
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREM-KANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ L+ LC A + D + + P V T++ L+ G+L EA
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEM++R +I+ +NSL+ C +DEA + M S PD +Y+ I+
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M R LV N TY +I + + A + +M+ G +P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + K + PD +TYN++ + + + G+ + +++
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P V Y+ M+ G C KKG EEA F M ++G P S T L
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFC-KKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L + A + P + TY ++ GL GE
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L ++M + K D++ ++++++++CK ++D+A + EM + G PD F+YS
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T+N +I K K+ EA +L DEMI+R
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN+++ C ++ A ++ T M ++ +PD TYN ++ + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + A F+ MV +G+ P T L +
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQAS-DCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ ++ + +++S
Sbjct: 460 LCKNGKLEKAMVVFEYLQKS 479
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
G+ ++Y + +++ LC+R + A K + P++ T + L+ G +SE
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L D+M+E D + +L+ + + EA ++ M G +PD +Y I+
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + +L+ M++ + +V Y+ +I LCK V++A L EM +G P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++Y+++++ C+ + A RL++ M + + P+ T+N ++ + G+ A +++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M +R P++ TY+ +++G C +L+EA + F +MV + P T L N
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHD-RLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 145/314 (46%), Gaps = 4/314 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K + A + FD + P + TY+ L+ G
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+++F M+ + C D++ +N+L+ CKA + + + R+M G + +Y+
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +A+D + V M + PN+ TYN ++ LCKN K+E+A + + + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN + C +V L ++ + V PD YN ++ + G + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM---MVDEGIPPYSSTVEML 296
++ M++ G P TY+ ++ + K A EM Y +ML
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 297 RNRLVGLGFLDIIE 310
+ + GFL+++
Sbjct: 601 HDGRLDKGFLEVLS 614
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L EA LF EM++ + I+ + LL A+ K D +M +G + ++Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ C + + +L M + P++ T N ++ C ++ EA L+D+M+E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++ ++ + + A+ L+ RM + PD TY V+ L + G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ MEK V YS ++ LCK + +++A F M ++GI P T L +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYR-HVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 284 CLCNYGRWSDASRLLSDMLER 304
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 160/308 (51%), Gaps = 9/308 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E ++P ++ + ++ +C+ +V A + + + + V TY+IL+R L + G+
Sbjct: 185 MFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGK 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+L +M+ + C +++ ++ L+ ++C+ G ++E G+L++M+ G EPD + Y
Sbjct: 244 WEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDP 303
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + VLD M VP++ YN I+ LCK ++ +EA + +++ E G
Sbjct: 304 LIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 363
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ SYN + + AL +I M + V PD YN ++ L R G D A
Sbjct: 364 CSPNASSYNTVFSALGSSGHKVRALGMILEML-DXVDPDVIAYNSLISCLCRDGMVDEAI 422
Query: 240 EVWESMEKRG--FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
E+ ME PSV +Y++++ GLC+ G++ +A + MVD+G P +T L
Sbjct: 423 ELLVDMEMESSECKPSVVSYNIVLLGLCRV-GRVSDATEVLAAMVDKGCLPNETTYTFL- 480
Query: 298 NRLVGLGF 305
+ G+GF
Sbjct: 481 --IEGIGF 486
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 4/287 (1%)
Query: 8 PSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
P ++ Q+ H K + + A+Q D K++ F+P + TY+IL+ L G L A +
Sbjct: 86 PRLHPSPQIPHPSAKPTESIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALE 145
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+++L+ ++ + L+EA G IDEA +L EM I +PD F Y+ I C
Sbjct: 146 FKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMC 204
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ F V+ S+ +V TYN ++R L K E ++L+ +M+ +G +
Sbjct: 205 REGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVV 264
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+ +++ C +V + L+ M K+ + PD + Y+ ++ +L + GR D A EV + M
Sbjct: 265 TYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVM 324
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G P + Y+ ++ LCK+K + +EA FE + + G P +S+
Sbjct: 325 ISDGCVPDIVNYNTILACLCKQK-RADEALSIFEKLGEVGCSPNASS 370
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
+I A+ +L M++ G PD +Y+I I + C +H+ + + + N P V TY
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I ++EA +LLDEM E PD + YN+I+ C V+ A +I+ ++ +
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXM-CREGYVDRAFEVISSISSK 222
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
D TYN++L+ L G+++ E+ M +G +V TYSV++ LC + GK+EE
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLC-RDGKVEE 281
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEIL 312
+ M +G+ P + L L G +D+ IE+L
Sbjct: 282 GVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVL 321
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P I + + +L LCK+K A F+ + +P +Y+ + LG G
Sbjct: 324 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGH 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML--REMRSIGAEPDAFSY 117
A + EML+ P D++A+NSL+ +C+ G +DEA +L EM S +P SY
Sbjct: 384 KVRALGMILEMLDXVDP-DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSY 442
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I + C + VL +M +PN TY +I + + +A L ++
Sbjct: 443 NIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVN 502
Query: 178 RGA 180
A
Sbjct: 503 MDA 505
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDVGELSE 62
+ P + + L+ LC+ V A + + + E + P+V +Y+I++ GL VG +S+
Sbjct: 398 VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSD 457
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ M+++ C + + L+E + G +++A R++ + DA S H
Sbjct: 458 ATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDA----RDLATTLVNMDAISE----H 509
Query: 123 AFCEANDIHSVFRVLDSMKRYNL 145
+F ++ F LD ++ NL
Sbjct: 510 SF---ERLYKTFCKLDVYRQLNL 529
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 162/319 (50%), Gaps = 6/319 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G P+ L+ LC + + A F D F +Y L+ GL VGE
Sbjct: 148 ILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGE 207
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L + + +++ ++++++ MCK ++++A + EM S G P+ +YS
Sbjct: 208 TRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 267
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + + M N+ P+V+T+N ++ CK+ K+ A +L+DEM +RG
Sbjct: 268 LISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y++IL C V+ A+ L+T++ + + P+ HTY +++ L G+ + A
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E + +G+ +V TY VM +G C KKG +EA M + G P + T E+++
Sbjct: 388 NIFEDLLVKGYDITVVTYIVMFYGFC-KKGLFDEASALLSKMEENGCIPDAKTYELIKLS 446
Query: 300 LVGLGFLDIIEILADKMER 318
L G D +A+K+ R
Sbjct: 447 LFKKGEND----MAEKLHR 461
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 160/321 (49%), Gaps = 7/321 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF---TPTVKTYSILVRGLGDVGELSEAR 64
P + +++L +L K KH + + K EF P + +IL+ +G + A
Sbjct: 85 PPAIEFNKILGSLVKSKHYHTV--LYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAF 142
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F ++L+ + + +L++ +C G I +A ++ ++G + + SY I
Sbjct: 143 SVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGL 202
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + +L + + PNV Y+ II +CK++ V +A+ L EM+ +G +P+
Sbjct: 203 CKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNV 262
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A+++ ++ A+ L +M EN+ PD +T+N+++ + + G+ A ++ +
Sbjct: 263 VTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDE 322
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M RG P++ TYS ++ LCK ++++A + D+GI P T +L + L G
Sbjct: 323 MHDRGQPPNIVTYSSILDALCKTH-RVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSG 381
Query: 305 FL-DIIEILADKMERSTSCTI 324
L D I D + + T+
Sbjct: 382 KLEDARNIFEDLLVKGYDITV 402
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 7/295 (2%)
Query: 29 AHQFFDNAKHEFTPTVKT------YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH 82
+ QF N F P + YS ++ +A LF+ +L + +
Sbjct: 31 SFQFLKNTHFNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEF 90
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N +L ++ K+ + + ++M G +P+ + +I I+ FC+ I F V + +
Sbjct: 91 NKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 150
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
PN T+ +I+ LC ++ +A D+++ G ++ SY ++ C E
Sbjct: 151 MGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRA 210
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL L+ R+ + V P+ Y+ ++ + + + A +++ M +G P+V TYS ++
Sbjct: 211 ALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 270
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
G GKL++A F M+ E I P T +L + G + L D+M
Sbjct: 271 GFF-TVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 154/315 (48%), Gaps = 5/315 (1%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + +++ ++LL L + +H K + F + P T++IL+RGL +L +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RKL M E C D +N+L+ KA + +A L EM P +Y+ +
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A ++LD M+ PN++TYN I+ LC+ K++EA ++L+EM RG PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+ + C V+ A + + RM V PD +Y V+ L + G D A+ + +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG P V TYS ++ G C K G++E A + M+ G P L L L
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFC-KGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 304 GFLDIIEILADKMER 318
G + E + +MER
Sbjct: 298 GHIGKAEDMLVEMER 312
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 15/311 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + + LCK V A +F A+ TP V +Y+ ++ GL G+L A
Sbjct: 177 GYFPDVVTYNSFIKGLCKCDRVDEARKFL--ARMPVTPDVVSYTTVINGLCKSGDLDSAS 234
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D M R C D++ ++SL++ CK G ++ A G+L M +G P+ +Y+ + A
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
I +L M+R P+V +YN I LCK E+V++A + D M+ERG P+
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 185 WSYNA----ILAYH------CDRAEVNMALRLITRMTKENVM-PDRHTYNMVLKLLVRVG 233
SY+ IL Y C + A L +++ E + PD YN++L +
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D+A ++ + M ++ +V T++++VHGLC +L +A MVDEG P T
Sbjct: 415 QIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDD-RLSDAETMLLTMVDEGFIPDFVTY 472
Query: 294 EMLRNRLVGLG 304
L + + G
Sbjct: 473 GTLVDAMCKCG 483
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 13/272 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P++ + LL AL + H+ K + + FTP V +Y+ + GL
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334
Query: 60 LSEARKLFDEMLERKCP----------VDILAHNSLLEAMCKAGNIDEAHGMLRE-MRSI 108
+ +A+ +FD M+ER C VDIL + LL+ +CK G DEA + + +
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
EPD F Y++ + + C+ I ++ M N NV T+N ++ LC ++++ +A
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDA 453
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L M++ G PD +Y ++ C + AL L K +PD TY+ ++
Sbjct: 454 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
LV + A ++ + +R + P T ++
Sbjct: 514 LVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
+G E + F+Y+ + + V M + P+ FT+ ++R LC++ ++E+
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A +LL M E G PD+ YNA+++ + + A + + M K + +P TY ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + R A ++ + M +G P++ TY+V+V GLC+++ KL+EA K E M G
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEER-KLDEAKKMLEEMAVRGYF 179
Query: 288 P 288
P
Sbjct: 180 P 180
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P ++ + +L + CKR+ + A Q + V T++ILV GL LS+A +
Sbjct: 397 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETM 456
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M++ D + + +L++AMCK G A + E G PD +YS I
Sbjct: 457 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 516
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
N + + + VP+ T + RKL
Sbjct: 517 ENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 161/317 (50%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G KP ++ +L K++ A FFD+ K F P V Y+ LV G G +
Sbjct: 172 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNI 231
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA ++F EM ++ ++ +++A+C++G I AH + EM +G +P+A +++
Sbjct: 232 SEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNL 291
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR P+ TYN +I C+++ +EEA ++L+ +++G
Sbjct: 292 MRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGC 350
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
N + S+N I +VN A R+ +M P+ TYN+++++ D +
Sbjct: 351 NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLK 410
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M++ P+ +TY V++ C G A +F+ M++E + P EM+ +
Sbjct: 411 LRKEMDENEIEPNANTYRVLISTFC-GIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQ 469
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 470 LRKAGQLKKHEELVEKM 486
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 39/282 (13%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI----------------------- 121
+++ KAG EA M G +PD ++S+ I
Sbjct: 152 MIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF 211
Query: 122 -----------HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
H +C A +I RV MK + PNV+TY+ +I LC++ ++ A+
Sbjct: 212 EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHD 271
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+ EMI+ G +P+ ++N ++ H L++ +M + PD TYN +++
Sbjct: 272 VFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHC 331
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
R + A ++ S+ K+G + S+++ + G K G + A + F M D P +
Sbjct: 332 RDDNLEEAVKILNSV-KKGCNLNASSFNP-IFGCISKLGDVNSAHRMFAKMKDLKCRPNT 389
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMR 332
T +L D++ L +M+ + I+ AN R
Sbjct: 390 VTYNILMRMFADKKSTDMVLKLRKEMDEN---EIEPNANTYR 428
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 157/314 (50%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + L L++ C H+ A F N K + P T + L++GL GE+ A
Sbjct: 91 GITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRA 150
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + +D +++ +L+ +CKAG +LR++ +PD Y+ IH
Sbjct: 151 LHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHC 210
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M + PNVFTY +I C ++EA+ LL+EM + NPD
Sbjct: 211 LCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPD 270
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N ++ +++ A+ L M +N+ P+ TY ++ L + +RA + +
Sbjct: 271 VYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 330
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M+++G P+V +Y++++ LC K G+LE A ++F+ ++ +G T ++ N L
Sbjct: 331 KMKEQGIQPNVYSYTILLDALC-KGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 389
Query: 304 GFLDIIEILADKME 317
G + L KME
Sbjct: 390 GLFGDVMDLKSKME 403
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 151/289 (52%), Gaps = 4/289 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + +L +L K K F + + TP + T SIL+ + ++ A +
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +L+R + + N+L++ +C G I A ++ + G + D SY I+ C+
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A + +V R+L ++ +++ P++ Y II LCKN+ + +A L EMI +G +P+ ++
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C + A L+ M +N+ PD +T+N+++ L + G+ D A ++E M+
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTV 293
+ +P++ TY+ ++ GLCK LE A + M ++GI P YS T+
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNH-HLERAIALCKKMKEQGIQPNVYSYTI 346
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 7/282 (2%)
Query: 11 YDLDQ-----LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
+ LDQ L++ LCK K + + H P + Y+ ++ L L +A
Sbjct: 162 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDAC 221
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ EM+ + ++ + +L+ C GN+ EA +L EM+ PD ++++I I A
Sbjct: 222 DLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 281
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ I + + MK N+ PN+ TY +I LCKN +E A L +M E+G P+
Sbjct: 282 AKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNV 341
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+SY +L C + A + + + + TYN+++ L + G F ++
Sbjct: 342 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 401
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
ME +G P+ T+ ++ L +K ++A K+ M+ G+
Sbjct: 402 MEGKGCMPNAITFKTIICALLEKDEN-DKAEKFLREMIARGL 442
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A F+ ML + P N++L ++ K + ++ G PD + SI I
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FC I F V ++ + PN T N +I+ LC +++ A D+++ +G
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
D+ SY ++ C E RL+ ++ +V PD Y ++ L + A ++
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M +G P+V TY+ ++HG C G L+EA M + I P T +L + L
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFC-IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALA 282
Query: 302 GLGFLD 307
G +D
Sbjct: 283 KEGKID 288
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 5/219 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+++ L+H C ++K A + K P V T++IL+ L G+
Sbjct: 227 MIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGK 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+EM + +I+ + SL++ +CK +++ A + ++M+ G +P+ +SY+I
Sbjct: 287 IDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTI 346
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ A C+ + + + + K Y+L NV TYN +I LCK + L +M
Sbjct: 347 LLDALCKGGRLENAKQFFQHLLVKGYHL--NVRTYNVMINGLCKAGLFGDVMDLKSKMEG 404
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+G P+ ++ I+ ++ E + A + + M ++
Sbjct: 405 KGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+A + M+ P + +N IL+ + L + + PD T ++++
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ A V+ ++ KRG++P+ T + ++ GLC G+++ A + + +V +G
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLC-FCGEIKRALHFHDKVVAQGF 162
Query: 287 PPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ L N L G + L K+E
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLE 193
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L+ CK + + + + A P + +Y++++ GL G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEI 294
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM +R +D + +N+L++ CK GN +A M EM G P +Y+ IH+
Sbjct: 295 SFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHS 354
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ LD M+ L PN TY ++ + + EAY++L EMI+ G +P
Sbjct: 355 MCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ HC ++ A+ ++ M ++ + PD +Y+ VL R D A V
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M +G P TYS ++ G C+++ + +EAC F+ M+ G+PP T L N
Sbjct: 475 KMVAKGIKPDTITYSSLIQGFCEQR-RTKEACDLFDEMLRVGLPPDEFTYTALIN 528
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 142/286 (49%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G P + + +L A + ++++ A F + + + +P V TY+IL+RG G L
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + FD M ++ C +++ +N+L++ CK ID+ +LR M G EP+ SY++ I+
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + + VL M + + TYN +I+ CK +A + EM+ G +P
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y +++ C +N A + +M + P+ TY ++ + G + A V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M GF PSV TY+ +++G C GK+ +A E M ++G+ P
Sbjct: 404 KEMIDNGFSPSVVTYNALINGHC-IAGKMVDAIAVLEDMKEKGLTP 448
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 39/333 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ + +++ LC+ +K ++ + K ++ TY+ L++G G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EML ++ + SL+ +MCKAGN++ A L +MR G P+ +Y+ +
Sbjct: 330 LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + ++ +RVL M P+V TYN +I C K+ +A +L++M E+G PD
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL--------------- 228
SY+ +L+ C +V+ ALR+ +M + + PD TY+ +++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509
Query: 229 -LVRVG-------------------RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++RVG +A ++ M ++G P V TYSV+++GL K+
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQA 569
Query: 269 GKLEEACKYFEMMVDEGIPP---YSSTVEMLRN 298
E ++ +E +P Y + +E N
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 17/304 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + +L C+ V A + P TYS L++G +
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LFDEML P D + +L+ A C G++ +A + EM G PD +YS+
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY-----NC----------IIRKLCKNEK 164
I+ + R+L + VP+ TY NC +I+ C
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ EA Q+ + M+E+ PD +YN ++ HC ++ A L M K + T
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++K L + G+ + V ++ + V+V + ++G ++ M +
Sbjct: 681 LVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVE-INHREGNMDVVLDVLAEMAKD 739
Query: 285 GIPP 288
G P
Sbjct: 740 GFLP 743
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 97/234 (41%), Gaps = 16/234 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L++A C ++ A Q + + P V TYS+L+ GL
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQAR 570
Query: 60 LSEARKLFDEML-ERKCPVDILAHN--------------SLLEAMCKAGNIDEAHGMLRE 104
EA++L ++ E P D+ H SL++ C G + EA +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +PD +Y++ IH C DI + + M + + + T +++ L K K
Sbjct: 631 MLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGK 690
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
V E ++ ++ + ++ + +++ L ++ M K+ +P+
Sbjct: 691 VNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++V+K R+ D+A + + GF P V +Y+ ++ + K + A F+ M
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ + P T +L G LD+ D+ME+
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEK 233
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P+ Y + LC+ K + A F+ K P S L+ G G+
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E ++ D M+ P++++ +N L+ +CK G +++A +L+ M ++G +P++ ++ +
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C +++ +LD M++ NLVP+ +Y +I LC + + A +LL++M G
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y+ ++ + + A RL+ M+ V PD YN ++ L + G+ + A+
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ RG P T+ + G K GK+ EA KYF+ M+D G+ P + +L N
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGY-SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P I+ + ++ L K ++ A + + P T+ + G G+++EA
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K FDEML+ + + L+ KAGN+ EA + R + ++G PD + S FIH
Sbjct: 563 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +V +K LVP+VFTY+ +I CK +VE+A++L DEM +G P+
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ YNA++ C ++ A +L M ++ + PD TY+ ++ + A ++
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M +G P Y+ +VHG C K+G +E+A F M+ +G
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCC-KEGDMEKAMNLFREMLQKG 783
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 143/285 (50%), Gaps = 3/285 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+ P ++ L+ CK+ V+ A + D P + Y+ LV GL G++
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 700
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
ARKLFD M E+ D + ++++++ CK+ N+ EA + EM S G +P +F Y+ +
Sbjct: 701 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ D+ + M + ++N +I CK+ K++EA QL EMI +
Sbjct: 761 HGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y ++ +HC ++ A L M + N++ D TY ++ ++G+ +
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+E M +G P TY ++++ CK+ L EA K + +V +G+
Sbjct: 880 FEKMVAKGVKPDEVTYGLVIYAHCKED-NLVEAFKLRDEVVGKGM 923
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP + K + A ++FD H P Y++L+ G G L EA
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 597
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F + D+ ++ + + K G + EA + E++ G PD F+YS I
Sbjct: 598 LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ ++ F + D M + PN+F YN ++ LCK+ ++ A +L D M E+G PD
Sbjct: 658 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 717
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ +C V A L M + V P YN ++ + G ++A ++
Sbjct: 718 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 777
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++GF ++S ++ ++ G C K K++EA + F+ M+ + I P
Sbjct: 778 EMLQKGFATTLS-FNTLIDGYC-KSCKIQEASQLFQEMIAKQIMP 820
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GI ++ + L+H LCK ++ A + P +T+ +L+ G
Sbjct: 359 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHN 418
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L DEM +R +++ +++ +C ++ A+ +L +M G +P+ YSI
Sbjct: 419 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSI 478
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ I R+LD M + P++F YN II L K K+EEA L E+ RG
Sbjct: 479 LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 538
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ A + + ++ A + M +MP+ Y +++ + G A
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 598
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
++ + G P V T S +HGL K G+++EA K F + ++G+ P YSS +
Sbjct: 599 SIFRRLHALGVLPDVQTCSAFIHGLLKN-GRVQEALKVFSELKEKGLVPDVFTYSSLI 655
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
PS +++ LC K + +A++ + P V YSIL+ G + EAR+L
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D M DI +N+++ + KAG ++EA L E++ G +PDA ++ FI + +
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 555
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + D M + L+PN Y +I K + EA + + G PD +
Sbjct: 556 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQT 615
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+A + V AL++ + + ++ ++PD TY+ ++ + G ++A E+ + M
Sbjct: 616 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 675
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+G P++ Y+ +V GLC K G ++ A K F+ M ++G+ P S T
Sbjct: 676 LKGIAPNIFIYNALVDGLC-KSGDIQRARKLFDGMPEKGLEPDSVT 720
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFD 68
+Y L+ ALCK ++ A + + + P YS+++ G+ VG++ EA +L
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKR 287
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
M E+ + + + +C+A ++EA EM+ G +PD + S I F
Sbjct: 288 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 347
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
DI V R+ D M + N+ TYN +I LCK K+E+A ++L M+ G P+ ++
Sbjct: 348 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFC 407
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ +C + AL L+ M K N++P +Y ++ L A ++ E M
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G P+V YS+++ +G++EEA + + M G+ P
Sbjct: 468 GLKPNVVVYSILIMAYA-SEGRIEEARRLLDGMSCSGVAP 506
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 151/317 (47%), Gaps = 6/317 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSE 62
G P ++D+ L+ + + + A F AK++ ++ S+L + L G +
Sbjct: 155 GSSPVVFDI--LIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLL-KDLLKCGMMEL 211
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
K+++ ML+ K D+ + L+ A+CK G++ A +L EM G P+ F YS+ I
Sbjct: 212 FWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIE 271
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ DI + SM LVPN +TY I LC+ +++ EA +EM + G P
Sbjct: 272 GMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 331
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D + +A++ +++ LR+ M + + TYN+++ L + G+ ++A E+
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 391
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M G P+ T+ +++ G C++ + A + + M + P + + + N L
Sbjct: 392 KGMVTLGCKPNSRTFCLLIEGYCREH-NMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 450
Query: 303 LGFLDIIEILADKMERS 319
L + L +KM S
Sbjct: 451 CKDLSLANKLLEKMTFS 467
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 129/259 (49%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++P + + L+H CK ++ A F + T +++ L+ G ++ EA
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 807
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF EM+ ++ D + + ++++ CKAG ++EA+ + +EM+ D +Y+ ++ +
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 867
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ VF + + M + P+ TY +I CK + + EA++L DE++ +G
Sbjct: 868 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 927
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++ ++ C R ++ A +L+ M + + P N +++ G+ D AT V+E
Sbjct: 928 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEG 987
Query: 245 MEKRGFYPSVSTYSVMVHG 263
++ G P +T +V+G
Sbjct: 988 VKSLGLVPDTTTLIDLVNG 1006
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G+ P F I I ++ + V K +++ ++ N +++ L K +E
Sbjct: 155 GSSPVVFD--ILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+++ + M++ D ++Y ++ C ++ A R++ M ++ + P+ Y++V++
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ +VG D A E+ SM ++G P+ TY+++ GLC+ K ++ EA FE M G+ P
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAK-RMNEAKLTFEEMQKTGLKP 331
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
+ L + + G +D + + D M SC I
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRIKDVM---VSCGI 364
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY +++ L EA KL DE++ + H+ L+ A+CK ++ EA +
Sbjct: 890 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 949
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM +G +P + + + +F EA + RV + +K LVP+ T ++
Sbjct: 950 LDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 1009
Query: 162 NEKVEEAYQLLDEMI 176
+ E+A L+ +++
Sbjct: 1010 DTDSEDARNLIKQLV 1024
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 158/307 (51%), Gaps = 4/307 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+ L+ LCK + A + + K + F V Y L+ G + G L
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++LFDEML + +++ ++ L+ +C+ G EA+ +L M G PD +Y+ I
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ +L+ M P+ TYN ++ LCK V +A+++L MIE+G D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRM-TKENVM-PDRHTYNMVLKLLVRVGRFDRATEV 241
+YN ++ CD+ +V+ AL+L M EN + P+ T+NM++ L + GR +A ++
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K+G ++ TY++++ G C K GK++EA + ++ ++D G P S T +L +
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGG-CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361
Query: 302 GLGFLDI 308
+ L+I
Sbjct: 362 KMRMLNI 368
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 147/313 (46%), Gaps = 4/313 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
++ +L LC+ V A + + +P + +Y+ L+ GL +L EA L EM
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
C + + +L++ +CK G +DEA +L M+ G + D Y I FC ++
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ D M + NV TY+C++ LC+ + +EA +L+ M E G +PD +Y ++
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C A+ L+ M ++ P TYN++L L + G A ++ M ++G
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD--EGIPPYSSTVEMLRNRLVGLGFLDII 309
V TY+ ++ GLC KGK++EA K F M D + P T ML L G L
Sbjct: 241 ADVVTYNTLMKGLC-DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299
Query: 310 EILADKMERSTSC 322
+ KM + SC
Sbjct: 300 VKIHRKMVKKGSC 312
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV----KVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+E G K + + L+ LC + V K+ + FDN ++ P V T+++L+ GL
Sbjct: 234 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN-ENCLEPNVFTFNMLIGGLCK 292
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G L++A K+ +M+++ +++ +N LL KAG I EA + +++ +G P++F+
Sbjct: 293 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YSI I FC+ ++ + M+ + L P +F YN ++ LCK +E+A L EM
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
PD S+N ++ + L +M + + PD T++ ++ L ++G D
Sbjct: 413 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 472
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
A E M GF P Y ++ GL KG E M +G
Sbjct: 473 EAKSALERMVASGFTPDALVYDSLLKGL-SSKGDTTEIINLLHQMAAKG 520
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 153/375 (40%), Gaps = 72/375 (19%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G + L+ C ++ + FD + + V TYS LV GL +G+ EA
Sbjct: 98 GFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA 157
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + M E D++ + L++ +CK G A +L M G EP +Y++ +
Sbjct: 158 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 217
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI--ERGAN 181
C+ + F++L M +V TYN +++ LC KV+EA +L + M E
Sbjct: 218 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLE 277
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +++N ++ C + A+++ +M K+ + TYNM+L ++ G+ A E+
Sbjct: 278 PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 337
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCK----------------------------------K 267
W+ + GF P+ TYS+++ G CK K
Sbjct: 338 WKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCK 397
Query: 268 KGKLEEACKYFE-----------------------------------MMVDEGIPPYSST 292
+G LE+A F+ MV+ G+ P + T
Sbjct: 398 EGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALT 457
Query: 293 VEMLRNRLVGLGFLD 307
L NRL LG LD
Sbjct: 458 FSTLINRLSKLGELD 472
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 144/309 (46%), Gaps = 14/309 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV----KVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MVE G +PS + LL LCK V K+ + K V TY+ L++GL D
Sbjct: 199 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK---ADVVTYNTLMKGLCD 255
Query: 57 VGELSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G++ EA KLF+ M + + + ++ N L+ +CK G + +A + R+M G+ +
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+Y++ + +A I + + VPN FTY+ +I CK + A L E
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M G NP + YN ++A C + A L M N PD ++N ++ ++ G
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YS 290
F E+ M + G P T+S +++ L K G+L+EA E MV G P Y
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRL-SKLGELDEAKSALERMVASGFTPDALVYD 494
Query: 291 STVEMLRNR 299
S ++ L ++
Sbjct: 495 SLLKGLSSK 503
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G ++ + LL K +K A + + F P TYSIL+ G +
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+ LF EM + +N+L+ ++CK G++++A + +EM + EPD S++
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A D V + M L P+ T++ +I +L K +++EA L+ M+ G
Sbjct: 426 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
PD Y+++L + + + L+ +M + + DR + +L L
Sbjct: 486 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDVGELS 61
G+ P+++D + L+ +LCK ++ A F NA E P + +++ ++ G G+
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE--PDIISFNTMIDGTLKAGDFQ 437
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
++L +M+E D L ++L+ + K G +DEA L M + G PDA Y +
Sbjct: 438 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 497
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
D + +L M V + + I+ LC + + + +LL + +
Sbjct: 498 KGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSE 557
Query: 182 PDEWSYNAIL 191
S N +L
Sbjct: 558 GASISCNELL 567
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV I +I L+ C +K A F+ E P V T++ILV G
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ M+++ DI+ +NSL++ C ++ A +L M G SY+I
Sbjct: 296 VKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNI 355
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + ++ M + PNV TYN +I LCK+ ++ A +L+D M +RG
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++IL C V+ A+ L+ ++ + + P+ +TY +++ L + GR + A
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDAR 475
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E + +G+ +V+TY+VM+ G C G +EA M D P + T E++
Sbjct: 476 NIFEDLLVKGYNLTVNTYTVMIQGFC-SHGLFDEALSLLSKMKDNSCIPDAITYEII 531
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 7/307 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ + C + + A F D F +Y L+ GL VGE
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 190
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L + + +D++ +++++++MCK N+++A + EM S + +YS
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + + M N+ P+V+T+N ++ CK +V+EA L M+++G
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+++ +C EVNMA ++ M+ V +YN+V+ ++ D+A
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++++ M + +P+V TY+ ++ GLC K G++ A + ++M D G P YSS ++
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLC-KSGRISYALELIDLMHDRGQQPDIITYSSILDA 429
Query: 296 L-RNRLV 301
L +N LV
Sbjct: 430 LCKNHLV 436
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 162/332 (48%), Gaps = 3/332 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ ++CK K+V A + + + TYS L+ G VG+L +A LF++M
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D+ N L++A CK G + EA L M G +PD +Y+ + +C N+++
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L++M + V +YN +I CK + V++A +L EM + P+ +YN+++
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ AL LI M PD TY+ +L L + D+A + ++ +G P++
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
TY++++ GLC K G+LE+A FE ++ +G +T ++ G D L
Sbjct: 456 YTYTILIDGLC-KGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLS 514
Query: 315 KMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
KM + SC + + + F K +++ E
Sbjct: 515 KM-KDNSCIPDAITYEIIICSLFDKDENDKAE 545
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 133/259 (51%), Gaps = 1/259 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GIKP I + L+ C V +A + H T TV++Y+I++ G +
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A KLF EM ++ +++ +NSL++ +CK+G I A ++ M G +PD +YS
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L +K + PN++TY +I LCK ++E+A + ++++ +G
Sbjct: 426 ILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKG 485
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N +Y ++ C + AL L+++M + +PD TY +++ L D+A
Sbjct: 486 YNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAE 545
Query: 240 EVWESMEKRGFYPSVSTYS 258
++ M RG S Y
Sbjct: 546 KLLREMITRGLLYSFLEYG 564
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 1/259 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P + Q+L +L K KH F ++ P ++IL+ +G + A +
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D + N+ ++ C G I +A ++ ++G D SY I+ C+
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + +L + + +V Y+ II +CK++ V +A+ L EM+ R + + +
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+A+++ C ++ A+ L +MT EN+ PD +T+N+++ + GR A M
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307
Query: 247 KRGFYPSVSTYSVMVHGLC 265
K+G P + TY+ ++ G C
Sbjct: 308 KQGIKPDIVTYNSLMDGYC 326
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 148/338 (43%), Gaps = 51/338 (15%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+ ++ + +++ CK K V A + F H + P V TY+ L+ GL G +S A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M +R DI+ ++S+L+A+CK +D+A +L +++ G P+ ++Y+I I
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
Query: 124 FCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + + + + K YNL N TY +I+ C + +EA LL +M +
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVN--TYTVMIQGFCSHGLFDEALSLLSKMKDNSCI 522
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM----------------PDRHTYNMV 225
PD +Y I+ D+ E + A +L+ M ++ P N
Sbjct: 523 PDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDS 582
Query: 226 LK----------------------LLVRVGRFDRATE-----VWESME--KRGFYPSVST 256
L+ +L + D+ E ++ + + K+G+ V+T
Sbjct: 583 LQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNT 642
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
Y+VM+ G C G +E+ M G P + T +
Sbjct: 643 YTVMIQGFC-SHGLFDESLALLSKMEVNGCIPDAVTYD 679
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 1/223 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF +M R + + N L+ C+ G I A +L ++ +G EPD + + FI FC
Sbjct: 92 LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
IH D + + +Y +I LCK + A +LL + + D
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV 211
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
Y+ I+ C VN A L + M + + TY+ ++ VG+ A ++ M
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P V T++++V C K+G+++EA MM+ +GI P
Sbjct: 272 TSENINPDVYTFNILVDAFC-KEGRVKEAKNGLAMMMKQGIKP 313
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 5/266 (1%)
Query: 31 QFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMC 90
QF +N F + T + ++ +A LF+ +L + + +L ++
Sbjct: 26 QFPENTHFYFIHSFSTSTTFHNN----NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLV 81
Query: 91 KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
K+ + + ++M G +P+ +++I I+ FC+ I F VL + + P+
Sbjct: 82 KSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTI 141
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T N I+ C ++ +A D+++ G + D+ SY ++ C E AL L+ R+
Sbjct: 142 TLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV 201
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ V D Y+ ++ + + + A +++ M R ++ TYS ++ G C GK
Sbjct: 202 DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC-IVGK 260
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
L++A F M E I P T +L
Sbjct: 261 LKDAIGLFNKMTSENINPDVYTFNIL 286
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 14/224 (6%)
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV------PNVFTYNCIIRKLCKNEKVEEAYQLLD 173
FIH+F + H+ V+D++ +N + P + I+ L K++ L
Sbjct: 35 FIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQ 94
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+M RG P+ ++N ++ C + A ++ ++ K PD T N +K G
Sbjct: 95 KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKG 154
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK---KKGKLEEACKYFEMMVDEGIPPYS 290
+ +A + + GF+ +Y +++GLCK + LE + +V + YS
Sbjct: 155 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYS 214
Query: 291 STVE-MLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
+ ++ M +++ V D ++ ++ + R S I + + G
Sbjct: 215 TIIDSMCKDKNVN----DAFDLYSEMVSRRISSNIVTYSALISG 254
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 148/328 (45%), Gaps = 2/328 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V +A + + PT Y+ L+ G GEL A
Sbjct: 150 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 209
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F +M R D + +N+L+ +CKA I A +L EM+ G P +++ I A
Sbjct: 210 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 269
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F VL M+ L PNV +Y I+ CKN K+ EA +LD+M + P+
Sbjct: 270 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 329
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNAI+ + + + A L+ +M + P TYN+++K L + A E+
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 389
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ P +Y+ ++ C +G +++A + M GI T L + L G
Sbjct: 390 SLSNHRLIPDAVSYNTLISACC-YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 448
Query: 304 GFLDIIEILADKMERSTSCTIQELANAM 331
G L+ +E L KM ++ + N M
Sbjct: 449 GRLNEMEYLYQKMMQNNVVPSNAIHNIM 476
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 41/373 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + LL LC+ + D A + P TYSIL GL G+
Sbjct: 76 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 135
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF + L+ + + LL +CK G + A +L+ + + G P Y+
Sbjct: 136 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 195
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ ++ F MK ++ P+ TYN +I LCK E++ A LL EM + G
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 255
Query: 180 ANP---------DEW--------------------------SYNAILAYHCDRAEVNMAL 204
NP D + SY +I+ C ++ A+
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V+P+ YN ++ V G D+A + E M+ G PS+ TY++++ GL
Sbjct: 316 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME----RST 320
C + ++ EA + + + + P + + L + G +D L +M +ST
Sbjct: 376 CNQS-QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 434
Query: 321 SCTIQELANAMRG 333
T +L + + G
Sbjct: 435 VRTYHQLISGLGG 447
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGDVGELS 61
IKP + L++ LCK + + A DN PTV+T++ L+ G G+L
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNG---VNPTVETFNTLIDAYGRTGQLE 277
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ + EM E +++++ S++ A CK G I EA +L +M P+A Y+ I
Sbjct: 278 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 337
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A+ E F +++ MK + P++ TYN +I+ LC ++ EA ++++ +
Sbjct: 338 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 397
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SYN +++ C R ++ AL L RM K + TY+ ++ L GR + +
Sbjct: 398 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 457
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCK 266
++ M + PS + +++MV K
Sbjct: 458 YQKMMQNNVVPSNAIHNIMVEAYSK 482
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 37/348 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + + ++ + + A + FD + P TY+ ++ G G+L +L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY--------- 117
D+M+ + + +N LL +C+AG + E +L EM S PD F+Y
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 118 --------------------------SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
SI ++ C+ + VL S+ LVP
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I C+ ++E A+ +M R PD +YNA++ C + A L+ M
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
V P T+N ++ R G+ ++ V M++ G P+V +Y +V+ C K GK+
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKI 311
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
EA + M + + P + + + V G D IL +KM+ +
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
P + ++N ++ M +AG +A + EM P+ +Y+ I + D+ + FR
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+ D M + L PN TYN ++ LC+ ++ E LLDEM + PD ++Y+ +
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ L L + K V +T +++L L + G+ A EV +S+ G P+
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
Y+ +++G C + G+LE A F M I P T L N L
Sbjct: 192 IYNTLINGYC-QTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 235
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------------------- 39
M E G+KP++ +++A CK + A D+ H+
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345
Query: 40 ---------------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
+P++ TY++L++GL + ++SEA ++ + + + D +++N+
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 405
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A C GNID+A + + M G + +Y I A ++ + + M + N
Sbjct: 406 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 465
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+VP+ +N ++ K +A L EM+++ N D+
Sbjct: 466 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 505
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 173
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D A+G+ EM G P+ +++
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTT 233
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 293
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 294 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 353
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++V+ C KKG + + K + M +G P T +L N
Sbjct: 354 KMLREMLSVGLKPDTGTYTMIVNEFC-KKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 411
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K++ A L DEM+ +G P+
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 229
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G +A ++ + M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 289
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 290 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 329
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 1/264 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ +S L+ + G L +A + + E K V +LE + K G
Sbjct: 53 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 112
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 113 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 172
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T+
Sbjct: 173 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFT 232
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 233 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSM 291
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 292 KGLKPDKFTYTTLIDGCCKEGDLD 315
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D + +S I A+ E+ + + + L T ++ L K + + +
Sbjct: 52 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 111
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+E++E G + +N ++ C ++ +A + +TK + P +YN ++ +R+
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G D + +M G P V TYSV+++GLCK+ K++ A F+ M+ +G+ P T
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KMDGANGLFDEMLVKGLVPNGVT 230
Query: 293 VEML 296
L
Sbjct: 231 FTTL 234
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 161/317 (50%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G KP ++ +L K++ A FFD+ K F P V Y+ LV G G +
Sbjct: 207 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNI 266
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA ++F EM ++ ++ +++A+C++G I AH + EM +G +P+A +++
Sbjct: 267 SEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNL 326
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR P+ TYN +I C+++ +EEA ++L+ +++G
Sbjct: 327 MRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGC 385
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
N + S+N I +VN A R+ +M P+ TYN+++++ D +
Sbjct: 386 NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLK 445
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M++ P+ +TY V++ C G A +F+ M++E + P EM+ +
Sbjct: 446 LRKEMDENEIEPNANTYRVLISTFC-GIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQ 504
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 505 LRKAGQLKKHEELVEKM 521
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 41/337 (12%)
Query: 32 FFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
FF+ A + EF + + Y ++ G V + A +L D M R + + L+
Sbjct: 132 FFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRY 191
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---------------------------- 121
KAG EA M G +PD ++S+ I
Sbjct: 192 VKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVV 251
Query: 122 ------HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
H +C A +I RV MK + PNV+TY+ +I LC++ ++ A+ + EM
Sbjct: 252 VYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEM 311
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
I+ G +P+ ++N ++ H L++ +M + PD TYN +++ R
Sbjct: 312 IDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNL 371
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ A ++ S+ K+G + S+++ + G K G + A + F M D P + T +
Sbjct: 372 EEAVKILNSV-KKGCNLNASSFNP-IFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNI 429
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMR 332
L D++ L +M+ + I+ AN R
Sbjct: 430 LMRMFADKKSTDMVLKLRKEMDEN---EIEPNANTYR 463
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF K+++I++ G G L +
Sbjct: 217 DYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRD 276
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++++++++ K D+ + + + A+ K G I A + ++M G PD + I
Sbjct: 277 AQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINPDVAICNCIID 336
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C N I + M +V TYN +I+ LCK +++E+ Y+LLD+M +G +P
Sbjct: 337 QLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSP 396
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ +L +V + L+ RM + D TYN++L L +VW
Sbjct: 397 NNRTYSYVLKTTEKPKDV---IALMQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVW 453
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+ G P ++++MVHGL +GKL+EA +Y+ M G+ P T
Sbjct: 454 DEMERNGSGPDQRSFTIMVHGL-HSQGKLDEALQYYTTMKSRGMIPEPRT 502
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M E GI P + + ++ LC + + A + F V TY+ L++ L
Sbjct: 319 MWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKR 378
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +L D+M + C + ++ +L+ K ++ +++ M G E D+ +Y++
Sbjct: 379 MEKVYELLDDMEAKGCSPNNRTYSYVLKTTEKPKDVI---ALMQRMEQTGCELDSDTYNL 435
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ + V +V D M+R P+ ++ ++ L K++EA Q M RG
Sbjct: 436 ILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRG 495
Query: 180 ANPDEWSYNAILAYH 194
P+ + + A H
Sbjct: 496 MIPEPRTKILVKAMH 510
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 159/314 (50%), Gaps = 3/314 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++ + L+H LC ++ + A F+ + + P V+TYS L+ G G+
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++++ M+ C +++A+ +++ +C+ ++A+ ++ M+ P+ +++
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C + + +V D M PN TYN ++ L K+ + EA+ L+ +M RG
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN I+ +C + AL L+ +M PD T N+V+ + G+ + A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RN 298
++ + + ++P + Y+ ++ G+C G +EEA Y M+ EGI P +T +L R+
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIG-VEEAIVYLRRMLSEGISPNVATWNVLVRH 640
Query: 299 RLVGLGFLDIIEIL 312
+G ++ L
Sbjct: 641 LFSNMGHSGAVQFL 654
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 11/332 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P+++ + LL ALCK V AH+ + + P +Y+ L+ L +G++ EA
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+L PV +N+L+ +CK +EA +L EM + G +P+ SY+ I+A
Sbjct: 236 RELAMS-FTPSVPV----YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+A ++ VL M PN+ T+ +I+ EA D MI G P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ C + + A+ + +M P+ TY+ ++ + G D A+EVW
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G +P+V Y+ MV LC+ +A E M E PP + T L G
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNS-MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 304 GFLDIIEILADKMERS----TSCTIQELANAM 331
G +D + D+M S + T EL +++
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 153/318 (48%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++ +++AL +V+++ +P + T++ L++G G
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +D M+ +++A+N+L+ +C ++ +A + +M G P+ +YS
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +A D+ V + M + PNV Y C++ LC+N +AY L++ M
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N + C V+ A+++ +M P+ TYN +L L++ RF A
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + ME RG ++ TY+ +++G C G L EA + MV G P + TV ++ +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYC-CAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570
Query: 300 LVGLGFLDIIEILADKME 317
G ++I L D++
Sbjct: 571 YCKQGKVNIAIQLMDRLS 588
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 147/306 (48%), Gaps = 10/306 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P L+ +LCK VK A + FTP+V Y+ L+ G+ EA
Sbjct: 211 GCDPDEVSYTTLISSLCKLGKVKEAREL----AMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L DEM+ + +++++ +++ A+ AGN++ + +L +M + G P+ +++ I F
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
H D M R +VPNV YN ++ LC + +A + ++M G P+
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+A++ + +++ A + M P+ Y ++ +L R F++A + E+
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV-----EMLRNR 299
M+ P+ T++ + GLC G+++ A K F+ M + G P ++T +L++R
Sbjct: 447 MQVENCPPNTVTFNTFIKGLC-GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 300 LVGLGF 305
G F
Sbjct: 506 RFGEAF 511
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 37/316 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEAR 64
K S+ +L L + +A ++F + + F T TY +++ L E+ +
Sbjct: 37 KSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQ 96
Query: 65 KLFDEM-LER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
L +M LE C D+ S++ + +AG+ ++A M+ +P Y+ +
Sbjct: 97 YLLQQMKLEGISCSEDLFI--SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILD 154
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A + N + + +MK+ + PNVFTYN +++ LCKN +V+ A++LL EM +G +P
Sbjct: 155 ALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDP 214
Query: 183 DEWSYNAILAYHCDRAEVN------------------------------MALRLITRMTK 212
DE SY +++ C +V A +L+ M
Sbjct: 215 DEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMN 274
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ + P+ +Y ++ L G + + V M RG P++ T++ ++ G K G
Sbjct: 275 KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS-H 333
Query: 273 EACKYFEMMVDEGIPP 288
EA +++ M+ EG+ P
Sbjct: 334 EALDFWDRMIREGVVP 349
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+ ++LL +L K + A + +H + TY+ ++ G G L EA
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M+ R D + N +++A CK G ++ A ++ + + PD +Y+ I
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C + L M + PNV T+N ++R L N A Q LD ++ G
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P+ Y + LC+ K + A F+ K P S L+ G G+
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E ++ D M+ P++++ +N L+ +CK G +++A +L+ M ++G +P++ ++ +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C +++ +LD M++ NLVP+ +Y +I LC + + A +LL++M G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y+ ++ + + A RL+ M+ V PD YN ++ L + G+ + A+
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ RG P T+ + G K GK+ EA KYF+ M+D G+ P + +L N
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGY-SKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 497
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P I+ + ++ L K ++ A + + P T+ + G G+++EA
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 473
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K FDEML+ + + L+ KAGN+ EA + R + ++G PD + S FIH
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +V +K LVP+VFTY+ +I CK +VE+A++L DEM +G P+
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ YNA++ C ++ A +L M ++ + PD TY+ ++ + A ++
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M +G P Y+ +VHG C K+G +E+A F M+ +G
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCC-KEGDMEKAMNLFREMLQKG 694
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 143/285 (50%), Gaps = 3/285 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+ P ++ L+ CK+ V+ A + D P + Y+ LV GL G++
Sbjct: 552 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 611
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
ARKLFD M E+ D + ++++++ CK+ N+ EA + EM S G +P +F Y+ +
Sbjct: 612 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ D+ + M + ++N +I CK+ K++EA QL EMI +
Sbjct: 672 HGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +Y ++ +HC ++ A L M + N++ D TY ++ ++G+ +
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+E M +G P TY ++++ CK+ L EA K + +V +G+
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKED-NLVEAFKLRDEVVGKGM 834
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP + K + A ++FD H P Y++L+ G G L EA
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 508
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F + D+ ++ + + K G + EA + E++ G PD F+YS I
Sbjct: 509 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 568
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ ++ F + D M + PN+F YN ++ LCK+ ++ A +L D M E+G PD
Sbjct: 569 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 628
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ +C V A L M + V P YN ++ + G ++A ++
Sbjct: 629 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 688
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++GF ++S ++ ++ G C K K++EA + F+ M+ + I P
Sbjct: 689 EMLQKGFATTLS-FNTLIDGYC-KSCKIQEASQLFQEMIAKQIMP 731
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
PS +++ LC K + +A++ + P V YS L+ G G + EAR+L
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D M DI +N+++ + KAG ++EA L E++ G +PDA ++ FI + +
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 466
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + D M + L+PN Y +I K + EA + + G PD +
Sbjct: 467 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 526
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+A + V AL++ + + ++ ++PD TY+ ++ + G ++A E+ + M
Sbjct: 527 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 586
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+G P++ Y+ +V GLC K G ++ A K F+ M ++G+ P S T
Sbjct: 587 LKGIAPNIFIYNALVDGLC-KSGDIQRARKLFDGMPEKGLEPDSVT 631
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GI ++ + L+H LCK ++ A + P +T+ +L+ G
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L DEM +R +++ +++ +C ++ A+ +L +M G +P+ YS
Sbjct: 330 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 389
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + I R+LD M + P++F YN II L K K+EEA L E+ RG
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ A + + ++ A + M +MP+ Y +++ + G A
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
++ + G P V T S +HGL K G+++EA K F + ++G+ P YSS +
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKN-GRVQEALKVFSELKEKGLVPDVFTYSSLI 566
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 129/259 (49%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++P + + L+H CK ++ A F + T +++ L+ G ++ EA
Sbjct: 659 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 718
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF EM+ ++ D + + ++++ CKAG ++EA+ + +EM+ D +Y+ ++ +
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 778
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ VF + + M + P+ TY +I CK + + EA++L DE++ +G
Sbjct: 779 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 838
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++ ++ C R ++ A +L+ M + + P + +++ G+ D AT V+E
Sbjct: 839 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 898
Query: 245 MEKRGFYPSVSTYSVMVHG 263
++ G P +T +V+G
Sbjct: 899 VKSLGLVPDTTTLIDLVNG 917
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 56/266 (21%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLF-----DEML-------------ERKCPVDILAH 82
+P V + IL+ +G L EA +F D +L E+ + +
Sbjct: 155 SPVV--FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTY 212
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
+ +C+A ++EA EM+ G +PD + S I F DI V R+ D M
Sbjct: 213 TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 272
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ N+ TYN +I LCK K+E+A ++L MI G
Sbjct: 273 CGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCK--------------------- 311
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
P+ T+ ++++ R RA E+ + MEKR PS +Y M++
Sbjct: 312 --------------PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 357
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
GLC K L A K E M G+ P
Sbjct: 358 GLCHCK-DLSLANKLLEKMTFSGLKP 382
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY +++ L EA KL DE++ + H+ L+ A+CK ++ EA +
Sbjct: 801 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 860
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM +G +P + S + +F EA + RV + +K LVP+ T ++
Sbjct: 861 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 920
Query: 162 NEKVEEAYQLLDEMI 176
+ E+A L+ +++
Sbjct: 921 DTDSEDARNLIKQLV 935
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 148/292 (50%), Gaps = 6/292 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
E G++ + +LL LC+ KHV VA + HEF +KT +I++ G +G + E
Sbjct: 100 ELGLELDLVSFQKLLMYLCRYKHVDVAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVRE 159
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++ + +++ KC D+ + + ++A+ G + A + M + +PD + I
Sbjct: 160 AKRFWKDIIASKCKPDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVID 219
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN- 181
A C + V + MK +PNV TYN +I+ +CK ++E+ Y+LLDEM E+ +
Sbjct: 220 ALCFKKRVPEALAVFEGMKERGCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSC 279
Query: 182 -PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PDE ++N +L EV L RM + T N++LKL ++
Sbjct: 280 MPDEITFNYLLKSLKKPEEVAGVLE---RMKINGCKMNNDTCNLLLKLHADWDSEEKVRY 336
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
WE MEK G +Y++M+H L KG++E+A +YF M ++G+ P T
Sbjct: 337 TWEEMEKNGLGLDRRSYTIMIHWL-YDKGRVEDALRYFGEMENKGMVPEPRT 387
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 23 RKHVKVAHQFFDNAKHEFTPTVKT--YSILVRGLGDVGELSEARKLFDEMLERKCPVDIL 80
R K A+ FF+ E T ++ + Y+ ++ LG + E + DEM +R+ VD
Sbjct: 14 RSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVLDEMSKREGFVDED 73
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+ L+ A ++EA G + R +G E D S+ + C + +L S
Sbjct: 74 TYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCRYKHVDVAETLLHS- 132
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
K + ++ T N ++ C V EA + ++I PD ++Y + ++ ++
Sbjct: 133 KGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYGTFIKALTNKGKL 192
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A++L M K PD N V+ L R A V+E M++RG P+V+TY+ +
Sbjct: 193 GTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKERGCIPNVATYNSL 252
Query: 261 VHGLCKKKGKLEEACKYFEMM 281
+ +C K G++E+ + + M
Sbjct: 253 IKHMC-KIGRMEKVYELLDEM 272
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G + + LL AL + A Q FD +++P +++Y+ L+ + L
Sbjct: 286 MRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYSPDLRSYTALMLAWCNARNL 345
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE+ D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 346 VEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTML 405
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M+ P+V TY C++ ++++ +L+EM ++G
Sbjct: 406 ICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGC 465
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR-FDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K R +
Sbjct: 466 PPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGC 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
VWE M +RG P V++Y+V + G + G+ EEA KY E M+++G+
Sbjct: 526 AVWEEMHRRGICPDVNSYTVFISGHI-RHGRPEEAYKYIEEMINKGMKAPQIDCNKFAAD 584
Query: 300 LVGLGFLDIIEILADKME 317
L G LD++ LA K++
Sbjct: 585 LSKAGKLDMLYELAQKVK 602
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 51/309 (16%)
Query: 16 LLHALCKRKHV-KVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+L L + KH + +++FF A FT T TY ++ LG + F+ M+
Sbjct: 195 VLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGKT-------RQFESMV- 246
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+LL+ M KAG + DAF + I +F A +I +
Sbjct: 247 -----------ALLQEMGKAGTLSM---------------DAFK--VAIKSFAAAGEIKN 278
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V + M++ V ++NC++ L EA Q+ D+M+ + +PD SY A++
Sbjct: 279 AVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQ-YSPDLRSYTALML 337
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C+ + A R+ M ++ + PD +N +++ L+R R A +++E M+ +G P
Sbjct: 338 AWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPP 397
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
+V TY++++ C K+GK++ A + FE M + P +T L LVG G
Sbjct: 398 NVWTYTMLICNHC-KRGKMDMAMECFEEMQEARCQPDVATYTCL---LVGYGN------- 446
Query: 313 ADKMERSTS 321
A +M+R T+
Sbjct: 447 AKRMDRVTA 455
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 2/253 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M+E G+KP + + ++ L + + A + F+ K + P V TY++L+ G+
Sbjct: 355 MLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGK 414
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F+EM E +C D+ + LL A +D +L EM G PDA +Y+
Sbjct: 415 MDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNA 474
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I R+ M + L P + TYN +++ + + +EM R
Sbjct: 475 LIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRR 534
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD SY ++ H A + I M + + + N L + G+ D
Sbjct: 535 GICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGKLDML 594
Query: 239 TEVWESMEKRGFY 251
E+ + ++ G +
Sbjct: 595 YELAQKVKFAGKF 607
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 148/328 (45%), Gaps = 2/328 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V +A + + PT Y+ L+ G GEL A
Sbjct: 198 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 257
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F +M R D + +N+L+ +CKA I A +L EM+ G P +++ I A
Sbjct: 258 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 317
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F VL M+ L PNV +Y I+ CKN K+ EA +LD+M + P+
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 377
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNAI+ + + + A L+ +M + P TYN+++K L + A E+
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 437
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ P +Y+ ++ C +G +++A + M GI T L + L G
Sbjct: 438 SLSNHRLIPDAVSYNTLISACC-YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 496
Query: 304 GFLDIIEILADKMERSTSCTIQELANAM 331
G L+ +E L KM ++ + N M
Sbjct: 497 GRLNEMEYLYQKMMQNNVVPSNAIHNIM 524
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 41/373 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + LL LC+ + D A + P TYSIL GL G+
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF + L+ + + LL +CK G + A +L+ + + G P Y+
Sbjct: 184 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 243
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ ++ F MK ++ P+ TYN +I LCK E++ A LL EM + G
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303
Query: 180 ANP---------DEW--------------------------SYNAILAYHCDRAEVNMAL 204
NP D + SY +I+ C ++ A+
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V+P+ YN ++ V G D+A + E M+ G PS+ TY++++ GL
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME----RST 320
C + ++ EA + + + + P + + L + G +D L +M +ST
Sbjct: 424 CNQS-QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 482
Query: 321 SCTIQELANAMRG 333
T +L + + G
Sbjct: 483 VRTYHQLISGLGG 495
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
IKP + L++ LCK + + A + + PTV+T++ L+ G G+L +
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ EM E +++++ S++ A CK G I EA +L +M P+A Y+ I A+
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
E F +++ MK + P++ TYN +I+ LC ++ EA ++++ + PD
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN +++ C R ++ AL L RM K + TY+ ++ L GR + +++
Sbjct: 449 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 508
Query: 245 MEKRGFYPSVSTYSVMVHGLCK 266
M + PS + +++MV K
Sbjct: 509 MMQNNVVPSNAIHNIMVEAYSK 530
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 37/348 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + + ++ + + A + FD + P TY+ ++ G G+L +L
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY--------- 117
D+M+ + + +N LL +C+AG + E +L EM S PD F+Y
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 118 --------------------------SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
SI ++ C+ + VL S+ LVP
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I C+ ++E A+ +M R PD +YNA++ C + A L+ M
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
V P T+N ++ R G+ ++ V M++ G P+V +Y +V+ C K GK+
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKI 359
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
EA + M + + P + + + V G D IL +KM+ +
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 407
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAF 115
+G ++ R+ F + D A N ++A AG++ EA GMLR M GA P+AF
Sbjct: 5 LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
SY++ I A V D M ++PN TYN +I K +E ++L D+M
Sbjct: 65 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G P+ +YN +L+ C + L+ M + ++PD TY+++ L R G
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ K G T S++++GLC K GK+ A + + +V+ G+ P
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLC-KDGKVSIAEEVLQSLVNAGLVP 236
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 24 KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM-LERKCPVDILAH 82
+H V F A P ++ V+ G+L EA + M + P + ++
Sbjct: 7 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 66
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N ++ M +AG +A + EM P+ +Y+ I + D+ + FR+ D M
Sbjct: 67 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ L PN TYN ++ LC+ ++ E LLDEM + PD ++Y+ + +
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
L L + K V +T +++L L + G+ A EV +S+ G P+ Y+ +++
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G C + G+LE A F M I P T L N L
Sbjct: 247 GYC-QTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 283
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------------------- 39
M E G+KP++ +++A CK + A D+ H+
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 393
Query: 40 ---------------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
+P++ TY++L++GL + ++SEA ++ + + + D +++N+
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 453
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A C GNID+A + + M G + +Y I A ++ + + M + N
Sbjct: 454 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 513
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+VP+ +N ++ K +A L EM+++ N D+
Sbjct: 514 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 553
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 8/290 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M+E G P +Y + L+ +CK K +++ Q E +P TY+ L+ L
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI---LRECSPNTVTYNTLISALCK 345
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
E+ A L ++ + D+ N+L++ +C + N D A M EM++ G +PD F+
Sbjct: 346 ENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFT 405
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YSI I + C + +L M+ N YN +I LCK+ ++E+A ++ D+M
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G + +YN ++ C V A +L+ +M E + PD+ TYN +L RVG +
Sbjct: 466 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIE 525
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+A ++ ++M G P + TY ++ GLC + G+++ A K + +GI
Sbjct: 526 KAGDIVQTMASNGCEPDIFTYGTLIGGLC-RAGRVDVASKLLRSVQMKGI 574
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 161/349 (46%), Gaps = 37/349 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+ ALCK ++ A P V T++ L++GL A ++
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+EM + C D ++ L++++C + EA +L+EM S G +A Y+ I C+
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ I + D M+ + + TYN +I LCKN++VEEA QL+D+MI G PD+++
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN++L Y C ++ A ++ M PD TY ++ L R GR D A+++ S++
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570
Query: 247 KRGFY-----------------------------------PSVSTYSVMVHGLCKKKGKL 271
+G P T+ ++ GLC G +
Sbjct: 571 MKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPI 630
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERS 319
+EA + M+++GI P + L L L D +IE++ ME++
Sbjct: 631 QEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKA 679
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 164/318 (51%), Gaps = 6/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ +G + + L++ CK V+ A +F E F+P T++ LV G +G
Sbjct: 219 MLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A + D M+E+ D+ +NSL+ MCK G ++A +L++M P+ +Y+
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ N+I + + + L+P+V T+N +I+ LC ++ + A ++ +EM +G
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE++Y+ ++ C + AL L+ M + YN ++ L + R + A
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+++ ME G S TY+ ++ GLCK K ++EEA + + M+ EG+ P T L
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNK-RVEEASQLMDQMIMEGLKPDKFTYNSLLTY 517
Query: 300 LVGLGFL----DIIEILA 313
+G + DI++ +A
Sbjct: 518 FCRVGDIEKAGDIVQTMA 535
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 149/286 (52%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GI + + L+ ALCK ++ A + A H P T++ L++G + G+
Sbjct: 149 MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGD 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A K+ +ML C + ++ L+ CK G ++EA + E+ G PD +++
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNS 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC +++ ++D M P+V+TYN +I +CK + E+A ++L +MI R
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN +++ C E+ A L + + ++PD T+N +++ L D A
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAM 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E++E M+ +G P TYS+++ LC ++ +L+EA + M G
Sbjct: 389 EMFEEMKNKGCKPDEFTYSILIDSLCYER-RLKEALMLLKEMESSG 433
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 132/257 (51%), Gaps = 1/257 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P Y+I + L + +L L +M+ +D+ N L++A+CKA + A
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
ML EM + G +PD +++ + F E D++ ++ M Y + + ++
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGF 238
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK +VEEA + + E+ E G +PD+ ++N+++ C VN AL ++ M ++ PD
Sbjct: 239 CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+TYN ++ + ++G F++A E+ + M R P+ TY+ ++ LCK+ ++E A
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN-EIEAATDLAR 357
Query: 280 MMVDEGIPPYSSTVEML 296
++V +G+ P T L
Sbjct: 358 ILVSKGLLPDVCTFNTL 374
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 94 NIDEAHGMLREMRS-IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
N E +L+ + + +G +PD Y+I ++A E N + V + M +V +V T+
Sbjct: 102 NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTF 161
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI--------------------LA 192
N +I+ LCK ++ A +L+EM G PDE ++ + L
Sbjct: 162 NVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLG 221
Query: 193 YHCDRAEVNM---------------ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
Y C V++ ALR + +++E PD+ T+N ++ R+G +
Sbjct: 222 YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVND 281
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ + M ++GF P V TY+ ++ G+C K G+ E+A + + M+ P + T L
Sbjct: 282 ALDIVDFMIEKGFDPDVYTYNSLISGMC-KLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 298 NRLVGLGFL----DIIEILADKMERSTSCTIQELANAM 331
+ L + D+ IL K CT L +
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 378
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 39/262 (14%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ LCK + ++ A + FD + + + TY+ L+ GL + EA +L D+M+
Sbjct: 442 NTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIM 501
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
D +NSLL C+ G+I++A +++ M S G EPD F+Y I C A +
Sbjct: 502 EGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDV 561
Query: 133 VFRVLDSMKRYNLV-----------------------------------PNVFTYNCIIR 157
++L S++ +V P+ T+ + R
Sbjct: 562 ASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFR 621
Query: 158 KLCKNE-KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LC ++EA EM+E+G P+ S+ + C + + + LI + ++ M
Sbjct: 622 GLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQM 681
Query: 217 PDRHTYNMVLKLLVRVGRFDRA 238
+R T +++ +++ +F+ A
Sbjct: 682 SERETS--MIRGFLKIRKFNDA 701
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G++P + + LL+ CK +K A F + +H PTV TY+IL+ G +G+
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR+L +EM+E+ C D+ + L++ A ++ A EM S G +PD F+Y+
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A I FR+ + M + + TYN +I LCK + +A L +M+ G
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC+R + A + M + + P TY + + R G A
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAY 608
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M + G P+ TY+V++H LC + G+ + A ++F M++ G+ P T +L
Sbjct: 609 GWFRKMLEEGVEPNEITYNVLIHALC-RTGRTQLAYRHFHEMLERGLVPNKYTYTLL 664
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 2/287 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
K S + + L+ L + VK A ++E PTV TY+ ++ GL G++ A+
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM D++ +NSLL CKAG++ EA + ++R G P +Y+I I +C
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ R+ + M +P+V TY +++ + A + DEM+ +G PD +
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN + + A RL M E + D TYN+++ L + G + A ++ M
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G P TY+ ++H C ++G L EA K+F+ M+ +G+ P + T
Sbjct: 545 VHNGLQPDCITYTCLIHAHC-ERGLLREARKFFKDMISDGLAPSAVT 590
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P+ + ++ L ++ ++ A + + + + TY+ L+ GL G + +A
Sbjct: 269 GCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKAD 328
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L EM ++ +N+++ + ++G ++ A EMR++G +PD +Y+ ++ +
Sbjct: 329 DLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGY 388
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+A + + ++ L P V TYN +I C+ +EEA +L +EM+E+G PD
Sbjct: 389 CKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDV 448
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + MA M + + PD YN ++ + +G +A + E
Sbjct: 449 CTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREV 508
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M G TY++++ GLC K G L +A MV G+ P
Sbjct: 509 MMLEGISSDTVTYNILIDGLC-KTGNLNDAKDLQMKMVHNGLQP 551
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+IL+ GL G L++A+ L +M+ D + + L+ A C+ G + EA ++M
Sbjct: 520 TYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDM 579
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P A +Y++FIHA+C +++S + M + PN TYN +I LC+ +
Sbjct: 580 ISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRT 639
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ AY+ EM+ERG P++++Y ++ +C A+R M + + PD T+ +
Sbjct: 640 QLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKAL 699
Query: 226 LK 227
K
Sbjct: 700 FK 701
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 4/267 (1%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + A H P VK + ++R L D + + EML+ I+ +N+LL++ K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249
Query: 92 AGNIDEAHGMLREM--RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
G D+ +L+EM R G P+ ++++ I D+ +++ M R + +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASS 308
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
FTYN +I L V++A L EM G P +YNA++ +V A
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + PD TYN +L + G A ++ + G P+V TY++++ G C + G
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC-RLG 427
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEML 296
LEEA + E MV++G P T +L
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTIL 454
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 18/181 (9%)
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
E +R A PD S + A+H M V PD N VL++L
Sbjct: 171 ECTDRDATPDTCSTLCLSAFH--------------EMASHGVAPDVKDCNRVLRVLSDAA 216
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV-DEGIPPYSST 292
R+D V M + G PS+ TY+ ++ K+ + A EM G P T
Sbjct: 217 RWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVT 276
Query: 293 VEMLRNRLVGLGFLDIIEILADKM---ERSTSCTIQELANAMRGKTGFRKSRSEETELES 349
++ L G L+ + + M ++++S T L + K +K+ + E+E+
Sbjct: 277 HNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMEN 336
Query: 350 D 350
+
Sbjct: 337 E 337
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELS 61
F ++P + + L+ LCK + + + + P TY+ L+ G +
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIE 433
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
AR+LFD+M + P +++ N+L++ MCK G I+ A EM+ G + +A +Y+ I
Sbjct: 434 AARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALI 493
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
AFC N+I + D M P+ Y +I L + K++ A +L +M E G +
Sbjct: 494 RAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD S+N ++ C + +++ A ++ M + PD TYN ++ + G F A +
Sbjct: 554 PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRL 613
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEMLRNRL 300
+ M K G P+V TY ++H C G L+EA K F +M +PP + +L N L
Sbjct: 614 MKKMVKEGLVPTVVTYGALIHAYC-LNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672
Query: 301 VGLGFLDIIEILADKME 317
+D+ L D M+
Sbjct: 673 CRKNQVDLALSLMDDMK 689
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 37/297 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ L+ L+ +CK + A +FF+ + + TY+ L+R +V + +A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505
Query: 64 RKLFDEMLERKCPVD-----------------------------------ILAHNSLLEA 88
+LFDEMLE C D I++ N L+
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
C+ +DEA+ ML+EM + G +PD +Y+ I F + D + R++ M + LVP
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT 625
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERG-ANPDEWSYNAILAYHCDRAEVNMALRLI 207
V TY +I C N ++EA ++ +M P+ YN ++ C + +V++AL L+
Sbjct: 626 VVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLM 685
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + V P+ +T+N + K L +A E+ + M + P T ++ L
Sbjct: 686 DDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL 742
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 16/296 (5%)
Query: 16 LLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGL------GDVGELSEARKL 66
L+ L ++ V A D K EF P T I+ L G + E L
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ E + + + L+ +C++G D A +L + +G +A S + + A
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN----- 181
A + + +L MK ++ PNV T+ +I LCK +V+EA ++ ++M +N
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ C L L+ RM ++ MP+ TYN ++ + + A E
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M K G P+V T + +V G+C K G++ A ++F M +G+ + T L
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMC-KHGRINGAVEFFNEMQGKGLKGNAVTYTAL 492
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P I + L++ C++ + A++ ++ P TY+ L+ G+
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYS 118
S A +L +M++ ++ + +L+ A C GN+DEA + R+M S P+ Y+
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I++ C N + ++D MK + PN T+N + + L + + +A++L+D M E
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 179 GANPD 183
NPD
Sbjct: 727 ACNPD 731
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 44/172 (25%)
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAYHCDRAEVNMALR----- 205
N +I L + +V++A LLDEM++ A P+ + + + + R +V A+
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 206 -LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG--------------- 249
L+++ + V P+ ++ L R GR DRA +V + K G
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315
Query: 250 --------------------FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
P+V T+ ++++ LCK + +++EA + FE M
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFR-RVDEALEVFEKM 366
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 6/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G P+ ++L+ C + A N K TPT+ TY+I+++G D G+
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A ++ + M C D ++ L+ CK ++ A GM EM G P+ +Y+
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + R+L+ MKR PNV TYN +I L K A +L M+E
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y+ ++ C+ + +AL + +M K +P+ HTY+ +++ L + GR + A
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
E++ ++K+G P TY M+ +C GK++ A + M++ G P Y ++
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIE-VCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724
Query: 296 LRNRLV 301
L+N +V
Sbjct: 725 LQNEMV 730
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G KP++Y L+ +R F ++ P TY+ L+ L + E+
Sbjct: 359 MKKKGCKPNVYTYTSLISG--QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +F+ M + C + ++N L+ C G+ ++A ML M P +Y+I
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +C++ D RVL+ MK P+ ++Y +I CK K+E A + +EM++RG
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+E +Y A+++ +C +++ A R++ RM + P+ TYN+++ L + F A E
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ + M + P V TYS +++GLC G + A + F MV G P YSS ++ L
Sbjct: 597 LCKVMLEEKISPDVVTYSTVINGLC-NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 32/252 (12%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L+ L + S + ++L ++L +NS++ A+CK GN+ +A ++ ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G +PD F+Y+ I +C D+ S F + + M PN TY+ +I LC + +V
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV------------------------- 200
EA + EM G P ++ A + CD +
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 201 -------NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
MA+ L RM+++ V+P+ TYN ++ +L+ D A V+ M K G P+
Sbjct: 375 ISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434
Query: 254 VSTYSVMVHGLC 265
S+Y+ ++ G C
Sbjct: 435 TSSYNELIRGYC 446
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 152/314 (48%), Gaps = 26/314 (8%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK----AGNIDEAHGMLREM 105
+++ + E+++A D +R + + + +LL + K + +D H +LRE
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE- 222
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G +P+ Y+ I+A C+ ++ +++ + + + P+ FTY +I C+N +
Sbjct: 223 ---GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDL 279
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ A+++ + M E G P+ +Y+ ++ C+ VN AL I+ MT+ V+P HT+
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAP 339
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L +GR + A +++ M+K+G P+V TY+ ++ G ++ ++ A F M +G
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG--QRVSRM--AIGLFHRMSRDG 395
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMER-----STS---------CTIQELANAM 331
+ P + T L N L+ +D I+ + M + +TS CTI + AM
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455
Query: 332 RGKTGFRKSRSEET 345
T K R T
Sbjct: 456 SMLTNMLKGRPTPT 469
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 24/307 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ G+ P+ L+ CK + + A + + K P V+TY++L+ GL
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L MLE K D++ +++++ +C G I A M +M G P+ +YS
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS 650
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + +K+ L+P+ TY +I + KV+ A+ L EMI G
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710
Query: 180 ANPDEWSYNAI-------LAYHCDRAEVNMALR---------------LITRMTKENVMP 217
P +Y+ + + YH A N A L +++ + +
Sbjct: 711 CQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFEL 770
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
R Y+ +L L R GR+ A ++ SM + P+ TY + L + K++ A
Sbjct: 771 SRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRAL-KVDLAMDV 829
Query: 278 FEMMVDE 284
F+ M D+
Sbjct: 830 FKHMSDQ 836
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 58/249 (23%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------------------- 39
MV+ G P+++ L+ AL + V+ A + F K +
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK 695
Query: 40 ---------------FTPTVKTYSILVRGLGD------VGELSEA--RKLFDEMLERKCP 76
PT++TY +L++GL + + L A FD+ + K
Sbjct: 696 VDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDV 755
Query: 77 VDILA--------------HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ +L+ +++LL + ++G EA+ + R M S P+ +Y F+
Sbjct: 756 ISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLI 815
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ A + V M ++ Y +I LC+ + +EA + ++M+ R N
Sbjct: 816 SLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNA 875
Query: 183 DEWSYNAIL 191
DE + ++
Sbjct: 876 DEIVWTILI 884
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
V P L+ LL A CK VK A F K +TYSIL G +
Sbjct: 209 VRLRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSILFFGWCRARDPK 268
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYS 118
+A K+ +EM++ K + + + +E+ C AG + EA + MR+ G+ P A +YS
Sbjct: 269 KAMKVLEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYS 328
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I A +A+ + F +L M+ +P+V TY +I +C K++ AY++L+EM
Sbjct: 329 IMIVALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRA 388
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C + + AL L RM + + P HTYNM++ + +G RA
Sbjct: 389 GFPPDIVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRA 448
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++W M+ RG ++ TY +M+ GL C GK E A + +++ + + +
Sbjct: 449 LDIWLEMDTRGCQRAIDTYEIMIDGLFDC---GKTEHATSLLDEVINRDMKLSYKKFDAI 505
Query: 297 RNRLVGLGFLDIIEILADKMER 318
RL +G L I L++ M R
Sbjct: 506 MLRLSAVGDLGAIHRLSEHMRR 527
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 10/243 (4%)
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFS 116
L+ RKL + R + P + A N LL+A CK G + EA + + R +G +A +
Sbjct: 197 LTHMRKLAKKRRVRLRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLG---NAET 253
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YSI +C A D +VL+ M + P FTY I C V EA +L + M
Sbjct: 254 YSILFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMR 313
Query: 177 ERG---ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
G ++P +Y+ ++ + L++ M MPD TY +++ + VG
Sbjct: 314 TEGSTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVG 373
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D A V E M + GF P + TY+ ++ LC + K ++A + E M++ P T
Sbjct: 374 KLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLR-KADDALELCERMIEAHCEPSVHTY 432
Query: 294 EML 296
ML
Sbjct: 433 NML 435
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 145/288 (50%), Gaps = 3/288 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ + A + A P TY+ ++RGL D G + +A
Sbjct: 104 GAPVDVFAYNTLVAGYCRYGRLDAARRLI--ASMPVPPDAYTYTPIIRGLCDRGRVGDAL 161
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML+R C ++ + LLEA+CK+ EA +L EMR+ G P+ +Y++ I+
Sbjct: 162 ALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGM 221
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ + Y P++ +Y +++ LC + ++ L EM+++ P+E
Sbjct: 222 CREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNE 281
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A++++ +M++ P+ N+V+ + + GR D A + +
Sbjct: 282 VTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNN 341
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M G P +Y+ ++ GLC + G+ E A + MV + PP T
Sbjct: 342 MGMYGCNPDTISYTTVLRGLC-RAGRWEHAKELLPEMVRKNCPPNEVT 388
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 140/309 (45%), Gaps = 37/309 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P Y ++ LC R V A D+ + P+V TY++L+ + EA
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ DEM + C +I+ +N ++ MC+ G +D+A +L + S G +PD SY+ +
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
Query: 125 CEA---NDIHSVF--------------------------------RVLDSMKRYNLVPNV 149
C A +D+ +F +VL M ++ PN
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
N +I +CK +V++AY L+ M G NPD SY +L C A L+
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M ++N P+ T+N + +L + G ++A ++ E M + G + TY+ +VHG C +G
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC-VQG 435
Query: 270 KLEEACKYF 278
+++ A + F
Sbjct: 436 RVDSALELF 444
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V + L+R L G S+A ++ PVD+ A+N+L+ C+ G +D A
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAAR-- 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
R + S+ PDA++Y+ I C+ + +LD M + P+V TY ++ +CK
Sbjct: 130 -RLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ EA +LDEM +G P+ +YN I+ C V+ A ++ R++ PD +
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y VLK L R+D ++ M + P+ T+ ++V C + G +E A + + M
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC-RGGMVERAIQVLQQM 307
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
G P ++ ++ N + G +D
Sbjct: 308 SQHGCTPNTTLCNIVINAICKQGRVD 333
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+ +G +P I +L LC R+ V F + + P T+ +LVR G
Sbjct: 237 LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGM 296
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +M + C + N ++ A+CK G +D+A+ L M G PD SY+
Sbjct: 297 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 356
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A +L M R N PN T+N I LC+ +E+A +L++ M E G
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YNA++ C + V+ AL L + E P+ TY +L L R D A
Sbjct: 417 CSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAA 473
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M ++ + T++V+V C+K G +EEA + M++ G P
Sbjct: 474 ELLAGMIQKDCPLNAVTFNVLVSFFCQK-GFVEEAMELVNQMMEHGCTP 521
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+EA +L + R D+ L+ +C+ G +A +LR + GA D F+Y+
Sbjct: 54 DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN 113
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C + + R++ SM + P+ +TY IIR LC +V +A LLD+M++R
Sbjct: 114 TLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +Y +L C + A+ ++ M + P+ TYN+++ + R GR D A
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ + GF P + +Y+ ++ GLC + + ++ F MVD+ P T +ML
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAAR-RWDDVKVLFAEMVDKKCVPNEVTFDML 287
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E+G I + L+H C + V A + F+N E P TY+ L+ GL L
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE--PNTITYTTLLTGLCHAERL 469
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +L M+++ CP++ + N L+ C+ G ++EA ++ +M G P+ +++
Sbjct: 470 DAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 529
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + +L + + + TY+ ++ L + ++ EEA Q+L + + G
Sbjct: 530 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 589
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P YN IL C R E + A+ M MP+ TY ++++ L G A
Sbjct: 590 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 649
Query: 241 VWESMEKRG 249
V + +G
Sbjct: 650 VLSELYAKG 658
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV P+ + + LC++ ++ A + + ++ + + TY+ LV G G
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 436
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF+ + C + + + +LL +C A +D A +L M +A ++++
Sbjct: 437 VDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + +++ M + PN+ T+N ++ + K+ EEA +LL ++ +G
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +Y++++ A++++ + + P YN +L L + D+A
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ + M G P+ STY +++ GL +G L+EA
Sbjct: 614 DFFAYMVSNGCMPNESTYIILIEGL-AHEGLLKEA 647
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+D+ R++++ P+V+ +IR LC+ + +A ++L GA D ++Y
Sbjct: 53 DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++A +C ++ A RLI M V PD +TY +++ L GR A + + M +
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RG PSV TY+V++ +CK G EA + M +G P T ++ N + G +D
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSG-FGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+R+L + + EA +L++ RG PD + ++ C R + A R++
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
D YN ++ R GR D A + SM P TY+ ++ GLC +G++ +A
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLC-DRGRVGDAL 161
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLV-GLGFLDIIEILADKMERSTSCT 323
+ M+ G P T +L + GF + + +L D+M R+ CT
Sbjct: 162 ALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVL-DEM-RAKGCT 208
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 142/286 (49%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P Y ++ CK V+ A + FD + + P Y+ L+ G D G L
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEV 237
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + EM++R + + +N + + G EAH ++ EM G PDAF+Y+I I+
Sbjct: 238 ALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILIN 297
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ ++ + M + V TY +I L V+E +L ++ + RG P
Sbjct: 298 GYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D + YNA++ HC +++ A ++ M K+ + PD TYN +++ L +GR D A +
Sbjct: 358 DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLI 417
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E M KRG P + +Y+ ++ G KG +++A K + M+ +G P
Sbjct: 418 EEMTKRGIQPDLVSYNTLISGY-SMKGDIKDAVKVRDEMMGKGFNP 462
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 118/223 (52%), Gaps = 7/223 (3%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF ++ + P+ N +L +C AG A +LR+M S P+A +Y+ I FC
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFC 158
Query: 126 EANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG-ANPD 183
+ + ++ M+ R + P+ +TY +I CK KVE+A ++ DEM+ G P+
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNA++ +CD+ + +ALR M V TYN+ + L GR A + E
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVE 278
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M ++G P TY+++++G C K+GK ++A K FE+MV +GI
Sbjct: 279 EMGEKGLAPDAFTYNILINGYC-KEGKEKKAMKMFEVMVGKGI 320
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 134/272 (49%), Gaps = 1/272 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ ++ + +H L AH + + P TY+IL+ G G+
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A K+F+ M+ + ++ + SL+ A+ G + E + + G PD F Y+
Sbjct: 305 EKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNA 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C D+ F ++ M++ + P+ TYN ++R LC +++EA L++EM +RG
Sbjct: 365 LINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN +++ + + ++ A+++ M + P TYN ++K L G+ A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAE 484
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
++ + M G P STY ++ GL + +L
Sbjct: 485 DLVKEMVGNGITPDDSTYISLIEGLTTEDERL 516
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N +L + C + AL L+ +M N + TYN V+ GR E+ M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPSPNAV----TYNTVIAGFCARGRVQAGIEIMREM 173
Query: 246 EKRG-FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNRLVGL 303
+RG P TY+ ++ G C K GK+E+A K F+ M+ EG + P + ++ N L+G
Sbjct: 174 RERGGIAPDKYTYATVISGWC-KVGKVEDATKVFDEMLTEGKVEPNA----VMYNALIG- 227
Query: 304 GFLD 307
G+ D
Sbjct: 228 GYCD 231
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D A+G+ EM G P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++V+ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIVNEFC-KKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K++ A L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G +A ++ + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 348
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----------------EFTPTVKT----- 46
P+ LH+ C H HQ AK F ++T
Sbjct: 10 PANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQR 69
Query: 47 -----YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 70 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLD 334
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 156/302 (51%), Gaps = 4/302 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + L+ + + K V+ F+ K + P V++YSIL+ GL G
Sbjct: 543 MVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGF 602
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KLF EM E+ +D+LA+N++++ CK+G +D+A+ +L EM++ G +P +Y
Sbjct: 603 SRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGS 662
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + + K + NV Y+ +I K +++EAY +L+E++++G
Sbjct: 663 VVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 722
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E++ A M P+ TY++++ L + +F++A
Sbjct: 723 LTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAF 782
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP---YSSTVEML 296
W+ M+K+G P+ TY+ M+ GL K +E + G+P Y++ +E L
Sbjct: 783 VFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842
Query: 297 RN 298
+
Sbjct: 843 SS 844
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M E G+ P+I ++ ++ LCK + + A F H+ +P +T+ L+ GLG G
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGR 497
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L+++ML+ +++ + SL++ K G ++ H + +EM G PD +
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +A ++ + + +K LVP+V +Y+ +I L K E Y+L EM E+G
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN ++ C +V+ A +L+ M + + P TY V+ L ++ R D A
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAY 677
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E + G +V YS ++ G K G+++EA E ++ +G+ P S T L +
Sbjct: 678 MLFEEAKSIGVDLNVVIYSSLIDGF-GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736
Query: 300 LV 301
LV
Sbjct: 737 LV 738
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 147/297 (49%), Gaps = 7/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L ++ V+ A + D + + P + TY+IL+ L GEL A
Sbjct: 373 GCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAAL 432
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ D M E +I+ N +++ +CKA +DEA + + PD+ ++ I
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + + M + +PNV Y +I+ K + E+ +++ EM+ RG +PD
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDL 552
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT-EVWE 243
N+ + EV L + + ++PD +Y++++ LV+ G F R T +++
Sbjct: 553 MLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAG-FSRETYKLFY 611
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G + V Y+ ++ G C K GK+++A + E M +G+ P Y S V+ L
Sbjct: 612 EMKEQGLHLDVLAYNTVIDGFC-KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGL 667
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K +F P Y+ L+ L LF +M E ++ +L+ + G ID
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A +L EM+S D Y++ I F + + ++ MK LVP+ TY +I
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK +++EA +L +E+ + P ++YN ++ + + + A L+ R ++ +
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P YN +L L R G+ + A + + M + P+++TY++++ LC K G+LE A K
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLC-KAGELEAALK 433
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ M + G+ P TV ++ +RL LD
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ + + ++ CK V A+Q + K + PTV TY +V GL +
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR 672
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF+E ++++ ++SL++ K G IDEA+ +L E+ G P++++++
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A +I +MK PN TY+ +I LC K +A+ EM ++G
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++A V A L R +PD YN +++ L + A
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAY 852
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V+E +G + T V++ L K LE+A
Sbjct: 853 IVFEETRLKGCRVNSKTCVVLLDAL-HKADCLEQA 886
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 10/290 (3%)
Query: 6 IKPSIYDLDQLLHALC-----KRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+K + + D +L+ +C K V +A +FF K + P TY+ L+ L
Sbjct: 264 MKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARR 323
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L EA +LF+E+ L R P + A+N+++ AG DEA+ +L + G P +Y+
Sbjct: 324 LDEAVELFEELDLNRSVPC-VYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYN 382
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + R+ D M R + PN+ TYN +I LCK ++E A ++ D M E
Sbjct: 383 CILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEA 441
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ + N ++ C +++ A + + + PD T+ ++ L R GR D A
Sbjct: 442 GLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDA 501
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M P+V Y+ ++ K G+ E+ K ++ MV G P
Sbjct: 502 YSLYEKMLDSDQIPNVVVYTSLIQNFF-KCGRKEDGHKIYKEMVHRGCSP 550
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L EA + + M + K A+ +L+ A+ A D + +M+ IG E + ++
Sbjct: 183 KLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFT 242
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ F I + +LD MK + ++ YN I K KV+ A++ EM +
Sbjct: 243 TLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ 302
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD+ +Y ++ C ++ A+ L + +P + YN ++ G+FD A
Sbjct: 303 GLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEA 362
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ E +++G PSV Y+ ++ L +KGK+EEA + + M + P +T +L +
Sbjct: 363 YSLLERQKRKGCIPSVIAYNCILTCL-GRKGKVEEALRIHDEMRQDAAPNL-TTYNILID 420
Query: 299 RLVGLGFLDIIEILADKMERS 319
L G L+ + D M+ +
Sbjct: 421 MLCKAGELEAALKVQDTMKEA 441
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 7/269 (2%)
Query: 24 KHVKVAHQFFD----NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDI 79
K V VA Q+F + P V Y+ + + L ++ +EM +
Sbjct: 111 KDVNVAFQYFRWVERKTQQAHCPEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSN 168
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+ + K+ + EA G++ MR P +Y+ I A AN + +
Sbjct: 169 HVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQ 228
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M+ NV + ++R + +++ A LLDEM D YN + +
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V+MA + M + ++PD TY ++ +L + R D A E++E ++ P V Y+
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNT 348
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+ G GK +EA E +G P
Sbjct: 349 MIMGY-GSAGKFDEAYSLLERQKRKGCIP 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 125/326 (38%), Gaps = 55/326 (16%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++ ++YDL +L V+ A FD ++V + + +++ A
Sbjct: 66 GMRKTVYDLCGVLENGLWGPDVEEALNVFDEMSQP--------EVIVGVMKRLKDVNVAF 117
Query: 65 KLFDEMLERK-----CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ F +ERK CP +N+ L M + N+D +L EM G
Sbjct: 118 QYF-RWVERKTQQAHCPE---VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE 173
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +F +++ + F V++ M+++ P Y +I L + + L +M E G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
Y A NV H + ++++ R GR D A
Sbjct: 234 -------YEA------------------------NV----HLFTTLVRVFAREGRIDAAL 258
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M+ F + Y+V + K GK++ A K+F M +G+ P T L
Sbjct: 259 SLLDEMKSNSFTADLVLYNVCIDCF-GKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGV 317
Query: 300 LVGLGFLD-IIEILAD-KMERSTSCT 323
L LD +E+ + + RS C
Sbjct: 318 LCKARRLDEAVELFEELDLNRSVPCV 343
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 157/298 (52%), Gaps = 1/298 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ G++ I L+ L+ AL K V+ A+ F K ++++IL+ G +L +
Sbjct: 228 KLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLDD 287
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
ARK+ DEM ++ +++++ +E CK + + EM+ +P+ +Y+IF+H
Sbjct: 288 ARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMH 347
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A +A ++ V + MK VP+ Y+ +I L ++ ++++A+ + ++M ++G +P
Sbjct: 348 ALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSP 407
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +YN ++ C E AL+L+ RM +++ PD TY +LK+ R R +
Sbjct: 408 DLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLL 467
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M K + TY ++V GLC K GKLE AC +FE MV +G+ P T +ML L
Sbjct: 468 NHMFKNNISIDLGTYVLLVGGLC-KSGKLELACSFFEEMVMKGLIPRDRTYKMLVEEL 524
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E KP++ +HAL K K V A + ++ K P YS L+ L G
Sbjct: 330 MQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGR 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +F++M ++ D+L +N+++ + C + A +LR M +PD +Y+
Sbjct: 390 LKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAP 449
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C I + +L+ M + N+ ++ TY ++ LCK+ K+E A +EM+ +G
Sbjct: 450 LLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKG 509
Query: 180 ANPDEWSYNAIL 191
P + +Y ++
Sbjct: 510 LIPRDRTYKMLV 521
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ L + +K A F++ K + +P + TY+ ++ E A KL M E
Sbjct: 380 LIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDS 439
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C DI + LL+ C+ I +L M D +Y + + C++ +
Sbjct: 440 CKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELAC 499
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
+ M L+P TY ++ +L +N E
Sbjct: 500 SFFEEMVMKGLIPRDRTYKMLVEELEQNNLTE 531
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G+ P ++ L + C +A + H Y +V GL G
Sbjct: 114 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR---GAVAYCTVVCGLYAHGHT 170
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR+LFD+ML ++ A N +L A+CK G++ EA +L ++ G + F+Y+I+
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I CEA + R++D M+ Y VP+V TYN +IR LCK +EA L M+ +G
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+++YN I+ +C + V A L+ + +PD+ TY ++ L G +RA E
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ + +G P + Y+ +V GLC +G + A + M +EG P T ++ N L
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLC-LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408
Query: 301 VGLG 304
+G
Sbjct: 409 CKMG 412
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + + ++ CK V+ A + +A + F P TY L+ GL G+
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF+E + DI+ +NSL++ +C G I A ++ EM G PD +Y+I
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ +I V++ +P+VFT+N +I CK K++ A QL++ M E G
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN++L C +VN M + P+ TYN++++ R + + A+
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 523
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V M + G +P +++ +++G C + G LE A F+ + ++G YS+T + N
Sbjct: 524 KVIVKMSQEGLHPDAVSFNTLIYGFC-RNGDLEGAYLLFQKLEEKG---YSATADTF-NT 578
Query: 300 LVG 302
L+G
Sbjct: 579 LIG 581
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 6/332 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + + L+ LCK+ + A + ++ P TY+ ++ G + + EA +L
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ + + D + + SL+ +C G+++ A + E ++ G +PD Y+ + C
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I +V++ M P++ TYN +I LCK + +A ++++ I +G PD ++
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N ++ +C R +++ AL+L+ RM + + PD TYN VL L + G+ + E ++ M
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G +P+ TY++++ C+ K+EEA K M EG+ P + + L G L
Sbjct: 496 LKGCHPNPITYNILIENFCRSN-KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Query: 307 DIIEILADKMER----STSCTIQELANAMRGK 334
+ +L K+E +T+ T L A GK
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 38/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ + P++ +++LHALCKR V A + + + TY+I +RGL + G
Sbjct: 180 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 239
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L D M P D++ +N+L+ +CK EA LR M + G PD F+Y+
Sbjct: 240 LPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + + +L VP+ TY +I LC VE A +L +E +G
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG------ 233
PD YN+++ C + + AL+++ M +E PD TYN+V+ L ++G
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418
Query: 234 -----------------------------RFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ D A ++ E M + G P TY+ +++GL
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C K GK+ E + F+ M+ +G P T +L
Sbjct: 479 C-KAGKVNEVNETFQEMILKGCHPNPITYNIL 509
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 155/332 (46%), Gaps = 37/332 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P L++ LC V+ A + F+ A+ + P + Y+ LV+GL G + A
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM E C DI +N ++ +CK GNI +A ++ + G PD F+++ I
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + S ++++ M Y + P+ TYN ++ LCK KV E + EMI +G +P+
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 502
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C ++ A ++I +M++E + PD ++N ++ R G + A +++
Sbjct: 503 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 562
Query: 244 SMEKRGFYPSVST-----------------------------------YSVMVHGLCKKK 268
+E++G+ + T Y V++ G C K
Sbjct: 563 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC-KT 621
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ A + M+ +G P ST + N L
Sbjct: 622 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 653
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P I + +++ LCK ++ A ++A + + P V T++ L+ G +
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L + M E D + +NS+L +CKAG ++E + +EM G P+ +Y+I
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC +N + +V+ M + L P+ ++N +I C+N +E AY L ++ E+G
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + ++MA ++ M + D +TY +++ + DRA
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 628
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K+GF PS+ST+ +++ L ++ +A +MV G+ P
Sbjct: 629 MHLVEMIKKGFIPSMSTFGRVINSLTVNH-RVFQAVGIIHIMVKIGVVP 676
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + L+ CKR + A Q + ++ P TY+ ++ GL G+++E
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 487
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F EM+ + C + + +N L+E C++ ++EA ++ +M G PDA S++ I+
Sbjct: 488 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC D+ + + ++ T+N +I + A ++ DEM+ +G D
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y ++ C A V+ A + M K+ +P T+ V+ L R +A +
Sbjct: 608 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 667
Query: 244 SMEKRGFYPSV 254
M K G P V
Sbjct: 668 IMVKIGVVPEV 678
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 73/356 (20%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y +R G L +A F+ M CP A+N++++A+ A D+AH + M
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVL----------------------------- 137
+ G PD +++I + +FC H R+L
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175
Query: 138 --DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---------------- 179
D M ++ PN+ +N ++ LCK V EA LL ++I+RG
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235
Query: 180 ------------------ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
A PD +YN ++ C ++ A+ + RM + +PD T
Sbjct: 236 EAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ ++ ATE+ + +GF P TY +++GLC +G +E A + F
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC-AEGDVERALELFNEA 354
Query: 282 VDEGIPP----YSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
+GI P Y+S V+ L L GL L ++++ + E IQ + G
Sbjct: 355 QAKGIKPDIVVYNSLVKGL--CLQGL-ILHALQVMNEMAEEGCHPDIQTYNIVING 407
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 148/282 (52%), Gaps = 2/282 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P L+ CK +K A + + TP + TY+ L GL GE+ A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L EM + ++I +NSL+ +CKAGNID+A ++++M G PDA +Y+ + A+
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C++ ++ +L M L P V T+N ++ C + +E+ +LL M+E+G P+
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+++ +C R + + M + V+PD +TYN+++K + A +
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M +GF +VS+Y+ ++ G K+K K EA + FE M EG+
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRK-KFLEARELFEQMRREGL 604
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y + ++ LCK V A + E P Y+ L+ G +G +S A
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDEM +RK D + + +++ +C+ G + EA + EM EPD +Y+ I
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + F + + M + L PN+ TY + LCK +V+ A +LL EM +G +
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 397
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ C ++ A++L+ M PD TY ++ + RA E+
Sbjct: 398 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 457
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M R P+V T++V+++G C G LE+ K + M+++GI P ++T L
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFC-MSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CK +V A++ FD K + +P TY+ ++ GL G
Sbjct: 249 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EM+ ++ D + + +L++ CK G + EA + +M +G P+ +Y+
Sbjct: 309 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ ++ + +L M R L N++TYN ++ LCK +++A +L+ +M G
Sbjct: 369 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y ++ +C E+ A L+ +M + P T+N+++ G +
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 488
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + M ++G P+ +TY+ ++ C + + + + M +G+ P +T +L
Sbjct: 489 KLLKWMLEKGIMPNATTYNSLIKQYC-IRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 1/232 (0%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
KL +EM + + +N ++ +CK G + EA +LREM S G PD Y+ I F
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ ++ S +R+ D M++ + P+ TY +I LC+ +V EA +L EM+ + PDE
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y A++ +C ++ A L +M + + P+ TY + L + G D A E+
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M ++G ++ TY+ +V+GLC K G +++A K + M G P + T L
Sbjct: 389 MCRKGLELNIYTYNSLVNGLC-KAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++ +IY + L++ LCK ++ A + D F P TY+ L+ E
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +ML+R+ ++ N L+ C +G +++ +L+ M G P+A +Y+
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C N++ + + M +VP+ TYN +I+ CK ++EA+ L +M+ +G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N SYNA++ R + A L +M +E ++ DR YN+ + G+ +
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 628
Query: 240 EVW-ESMEK 247
E+ E++EK
Sbjct: 629 ELCDEAIEK 637
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V ++++ M+ L PN +TYN +I LCK KV EA ++L EMI G PD Y ++
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C V+ A RL M K + PD TY V+ L + GR A +++ M + P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
TY+ ++ G C K+GK++EA M+ G+ P T L + L G +D L
Sbjct: 327 DEVTYTALIDGYC-KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
Query: 313 ADKMER 318
+M R
Sbjct: 386 LHEMCR 391
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P L+ A CK + + AH+ E PTV T+++L+ G G L +
Sbjct: 428 GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDG 487
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL MLE+ + +NSL++ C N+ + R M + G PD +Y+I I
Sbjct: 488 EKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 547
Query: 124 FCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+A ++ + + M K +NL V +YN +I+ K +K EA +L ++M G
Sbjct: 548 HCKARNMKEAWFLHRDMVGKGFNLT--VSSYNALIKGFYKRKKFLEARELFEQMRREGLV 605
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
D YN + D ++ + L L ++ ++ D T N
Sbjct: 606 ADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNE-------KVEEAYQLLDEMIERGANPDEWSY 187
++ D M Y L+ +V + N I L ++ K E +L++EM +G P+ ++Y
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTY 226
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++ C +V A R++ M E + PD Y ++ ++G A +++ M+K
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
R P TY+ ++ GLC + G++ EA K F MV + + P T L
Sbjct: 287 RKISPDFITYTAVICGLC-QTGRVMEADKLFHEMVCKRLEPDEVTYTAL 334
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 165/323 (51%), Gaps = 3/323 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ + ++LL LCK+ VK + D K P + TY++ ++GL GE
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ ++E+ D++ +N+L+ +CK EA L +M + G EPD+++Y+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + R++ VP+ FTY +I LC + A L +E + +G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN ++ ++ + A +L M+++ ++P+ T+N+++ L ++G A
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M +G++P + T+++++HG + K+E A + ++M+D G+ P T L N
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQL-KMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 300 LVGLG-FLDIIEILADKMERSTS 321
L F D++E +E+ +
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCA 528
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
GI P +Y + + CK A + +N + V Y +V G + +E
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF +ML + + N LL +CK G++ E +L ++ G P+ F+Y++FI
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ R++ + P+V TYN +I LCKN K +EA L +M+ G PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++A +C V +A R++ +PD+ TY ++ L G +RA ++
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+G P+V Y+ ++ GL +G + EA + M ++G+ P T +L N L +
Sbjct: 381 EALGKGIKPNVILYNTLIKGL-SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 304 G 304
G
Sbjct: 440 G 440
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 159/317 (50%), Gaps = 8/317 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ LC A F+ A + P V Y+ L++GL + G + EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM E+ ++ N L+ +CK G + +A G+++ M S G PD F+++I IH
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + +LD M + P+V+TYN ++ LCK K E+ + M+E+G P+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N +L C +++ AL L+ M ++V PD T+ ++ + G D A ++
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 244 SMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL-- 300
ME+ S TY++++H +K + A K F+ MVD + P T ++ +
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKL-NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 301 ---VGLGFLDIIEILAD 314
V LG+ ++E++ +
Sbjct: 650 TGNVNLGYKFLLEMMEN 666
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
++E G KP + + L++ LCK + A + +E P TY+ L+ G G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ + + D + SL++ +C G + A + E G +P+ Y+
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I I ++ + M L+P V T+N ++ LCK V +A L+ MI +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++N ++ + + ++ AL ++ M V PD +TYN +L L + +F+
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E +++M ++G P++ T+++++ LC+ + KL+EA E M ++ + P + T L +
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYR-KLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 300 LVGLGFLDIIEILADKMERS 319
G LD L KME +
Sbjct: 576 FCKNGDLDGAYTLFRKMEEA 595
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y ++ G G++ EA +F+ M C + ++N+++ + +G D+AH + M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R G PD +S++I + +FC+ + H+ R+L++M NV Y ++ +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E Y+L +M+ G + ++N +L C + +V +L+ ++ K V+P+ TYN+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L + G D A + + ++G P V TY+ +++GLCK K +EA Y MV+EG
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS-KFQEAEVYLGKMVNEG 316
Query: 286 IPPYSSTVEML 296
+ P S T L
Sbjct: 317 LEPDSYTYNTL 327
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P I+ + L+H + ++ A + D + P V TY+ L+ GL +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + + M+E+ C ++ N LLE++C+ +DEA G+L EM++ PDA ++
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+ D+ + + M+ Y + + TYN II + V A +L EM++R
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD ++Y ++ C VN+ + + M + +P T V+ L R A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 239 TEVWESMEKRGFYP 252
+ M ++G P
Sbjct: 692 AGIIHRMVQKGLVP 705
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV +Y+ ++ L D G +A K++ M +R D+ + +++ CK A +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M S G E + +Y + F E N + + M + + T+N ++R LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V+E +LLD++I+RG P+ ++YN + C R E++ A+R++ + ++ PD T
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
YN ++ L + +F A M G P TY+ ++ G CK
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P +Y + LL+ LCK K V + + P + T++IL+ L +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYS 118
L EA L +EM + D + +L++ CK G++D A+ + R+M + +Y+
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I IHAF E ++ ++ M L P+ +TY ++ CK V Y+ L EM+E
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
G P + ++ C V A +I RM ++ ++P+
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK--HEFTPTVKTYSILVRGLGDVGELSEA 63
+ P L+ CK + A+ F + ++ + + TY+I++ + ++ A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLF EM++R D + +++ CK GN++ + L EM G P + I+
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
C + ++ ++ M + LVP C + K
Sbjct: 682 LCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDK 716
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TY +I KL K E ++L +M E G + E Y + + + +V A+ + R
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M + P +YN ++ +LV G FD+A +V+ M RG P V ++++ + CK
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
++ G+ PS L+H LC A + F D + P+ TY++++ G
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L +M+E D++ +N++++ +CK+ ++EA + EM +G P+ S++
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468
Query: 120 FIHAFCEANDIHS---------VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
I C+ + I FR+L M VP+V TY+ +I LC +V++A
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
LL++M++R P + N ++ C + A ++ M PD TYN ++
Sbjct: 529 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R G+ +RA E+ M RG P+V TY+ +V GLCK +L EAC F M G P
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN-RLPEACGVFAQMKSSGCAP 645
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G PS + ++ A CKR ++ A + P V TY+ ++ GL + EA
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKA---------GNIDEAHGMLREMRSIGAEPDA 114
LF+EM C + +HN+++ +C+ G +DEA +L+ M G PD
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+YS I C + +L+ M + P V T N +I LCK +++EA ++LD
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+ G +PD +YN ++ HC + A L++ M + P+ TY ++ L + R
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V+ M+ G P++ TY+ ++ G C G+++ K F MV GI P
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFC-SAGQVDGGLKLFGEMVCAGISP 680
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 138/302 (45%), Gaps = 17/302 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF--FDNA--------KHEFTPTVKTYSIL 50
M G P+ + ++ LC++ + A Q D A P V TYS L
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ GL + + +AR L ++M++R+C ++ N+L+ +CKAG I EA +L M S G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD +Y+ +H C A +L M L PNV TY ++ LCK ++ EA
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+ +M G P+ ++Y A++ C +V+ L+L M + PD Y + L
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 693
Query: 231 RVGRFDRATEVW----ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ GR RA E+ ES+ + V Y V GL + GK+E A + MV G
Sbjct: 694 KSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLL-EAGKMEMALGFVRDMVRGGQ 750
Query: 287 PP 288
P
Sbjct: 751 LP 752
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 52/324 (16%)
Query: 16 LLHALCKRKHVKVAHQFFDN-------AKHEFTPTVKTYSILVRGLGDVGELSEARKLFD 68
+L LCK V+ A + F + + P+++ Y+I++ GL + EA ++F+
Sbjct: 253 VLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFE 312
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
+M ER D ++ L++ + KAG +++A + +++ G P +Y+ IH C AN
Sbjct: 313 KMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ M R P+ TYN +I CK +EEA L+ +MIE G PD +YN
Sbjct: 373 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432
Query: 189 --------------AILAYH------------------------------CDRAEVNMAL 204
A+L ++ C R +++ A
Sbjct: 433 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAF 492
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ RMT + +PD TY+ ++ L + R D A + E M KR P+V T + ++HGL
Sbjct: 493 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 552
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K G+++EA + + MV G P
Sbjct: 553 C-KAGRIKEAREVLDAMVSSGQSP 575
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + L+ LC V A H D K + PTV T + L+ GL G
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR++ D M+ D++ +N+L+ C+AG + A +L +M + G P+ +Y+
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+AN + V MK PN+FTY +I C +V+ +L EM+ G
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR---HTYNMVLKLLVRVGRFD 236
+PD Y + A C AL ++ R +E++ + Y + L+ G+ +
Sbjct: 678 ISPDHVVYGTLAAELCKSGRSARALEIL-REGRESLRSEAWGDEVYRFAVDGLLEAGKME 736
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
A M + G P+ + +V GLC K G+ EA E ++D
Sbjct: 737 MALGFVRDMVRGGQLPAPERCASLVAGLC-KSGQGGEARAVLEEIMD 782
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 10/276 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDV-- 57
M+E G P + + ++ LCK V+ A F+ + TP ++++ ++ GL
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 478
Query: 58 -------GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
G+L EA +L M + D++ +++L+ +C +D+A +L +M
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+P + + IH C+A I VLD+M P+V TYN ++ C+ + E A +
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
LL +M+ RG P+ +Y A+++ C + A + +M P+ TY ++
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 658
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
G+ D +++ M G P Y + LCK
Sbjct: 659 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 694
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 8/278 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + GI P+ ++ C A + F + +P Y++L+ L E
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+K+ M++R C D ++L +CKAG +DEA ++ EMRS P + S
Sbjct: 61 EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
H C + F++L+ M V N YN ++ LCK +V++A +L M E+
Sbjct: 121 AHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRI 176
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
S +++L D ++ AL++ +E P T N++L+ G+ D+A E
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARE 233
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+ +M P +Y ++ GLC K G++EEA + F
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLC-KAGRVEEAVRLF 270
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M ++G P + +++ C+ A+++ + M +E P YN+++ L +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQE 59
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
+ ++ + M RG +P T++ ++ GLCK GK++EA + M IPPY +T
Sbjct: 60 TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKA-GKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 295 MLRNRLVGLGFLD----IIEILADKMERSTSCTIQELANAMRGKTGFRKSRS 342
L + L G ++ ++EI+ + + + L A R +R+
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELART 170
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSE 62
F ++ I D LL ALC+ K+V A K + K+++I++ G +V G E
Sbjct: 175 FKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVIGSPRE 234
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +++ EM D+++++S++ K G++++ + M+ EPD Y+ IH
Sbjct: 235 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIH 294
Query: 123 AFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A +A+ + ++ +M+ + PNV TYN +I+ LCK K EEA Q+ DEM+E+G
Sbjct: 295 ALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 354
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y+A + EV L+ +M K P TY M+++ L R FD +
Sbjct: 355 PTIRTYHAFMRILRTGEEV---FELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLL 411
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
W M+++G P +S+Y VM+HGL GK+EEA Y++ M ++G+ P + +M+++
Sbjct: 412 WNEMKEKGVGPDLSSYIVMIHGLF-LNGKIEEAYGYYKEMKEKGMRPNENVEDMIQSWFS 470
Query: 302 G 302
G
Sbjct: 471 G 471
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 42/257 (16%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
++S++ + K D A ++ EMR ++ + I I +C +D+ +
Sbjct: 113 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 172
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL---------------------------- 172
KR+ L + + ++ LC+ + V +A L+
Sbjct: 173 KRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVIGSP 232
Query: 173 -------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EM G D SY+++++ + +N L+L RM KE++ PDR YN V
Sbjct: 233 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAV 292
Query: 226 LKLLVRVGRFDRATEVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L + A + ++M E++G P+V TY+ ++ LCK + K EEA + F+ M+++
Sbjct: 293 IHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKAR-KTEEAKQVFDEMLEK 351
Query: 285 GIPP----YSSTVEMLR 297
G+ P Y + + +LR
Sbjct: 352 GLFPTIRTYHAFMRILR 368
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V +YS ++ G G+L + ++EML+++ +++ +NS++ A+CKA +D+A +
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M G PD +Y+ +H FC + L M+ + P+V TYN ++ LCK
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N + EA ++ D M +RG PD +Y +L + + + L+ M + + P+ +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++++ + + + A V+ M ++G P+ TY ++ LC K G++E+A YFE M
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLC-KSGRVEDAMLYFEQM 248
Query: 282 VDEGIPPYS 290
+DEG+ P S
Sbjct: 249 IDEGLRPDS 257
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P++ + ++ ALCK + V A + K P TY+ +V G G+
Sbjct: 38 MLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 97
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA + M G +PD +Y
Sbjct: 98 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 157
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ ++ K EKVEEA + +M ++G
Sbjct: 158 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 217
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +Y ++ C V A+ +M E + PD YN ++ L ++++A
Sbjct: 218 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 277
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M RG S ++ ++ C K+G++ E+ K F++MV G+ P
Sbjct: 278 ELFLEMLDRGICLSTIFFNSIIDSHC-KEGRVIESVKLFDLMVRIGVKP 325
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + ++H C K A F + + P V TY+ L+ L G
Sbjct: 73 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 132
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R DI + +LL+ G + E HG+L M G P+ + +SI
Sbjct: 133 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 192
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 193 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 252
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN+++ C + A L M + +N ++ + GR +
Sbjct: 253 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESV 312
Query: 240 EVWESMEKRGFYPSVST 256
++++ M + G P + T
Sbjct: 313 KLFDLMVRIGVKPDIIT 329
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 171/407 (42%), Gaps = 79/407 (19%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I + L+ LC + A + F K TP V TY L++GL G ++ A
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193
Query: 64 RKLFDEML------ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
KL EML E C +++ +N +++ +CK G DEA + EM++ G P SY
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISY 253
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IH FC A R+LD M L P++ T+N +I LCK KV EA +LL MIE
Sbjct: 254 NSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 313
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV------------ 225
G PD +YN+++ C ++N A L M + PD +YN++
Sbjct: 314 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 373
Query: 226 -----------------------LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
LK + G+ D A +++ M+ G + TY + +
Sbjct: 374 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 433
Query: 263 GLCK----------------------------------KKGKLEEACKYFEMMVDEGIPP 288
GLCK K GKLE A + FE + +EG P
Sbjct: 434 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 493
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT--IQELANAMRG 333
T ++ + G +D +L KME + CT I MRG
Sbjct: 494 NVVTYTIMIHGFCREGQVDKANVLIQKME-ANGCTPDIITYNTLMRG 539
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 67 FDEMLERKCPVDILAH-NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F ++ R P L+ N LL + K + + + +MR G D + +I ++ C
Sbjct: 56 FFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLC 115
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
N + F + R PN+ TYN +I+ LC ++ EA +L M + G PD
Sbjct: 116 NVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVV 175
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ C +N+AL+L M + N P+ TYN+++ L +VGR D A
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M+ +G PS+ +Y+ ++HG C GK EE+ + + M+D+G+ P T +L +
Sbjct: 236 QLFEEMKTQGMIPSIISYNSLIHGFC-CAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDT 294
Query: 300 L 300
L
Sbjct: 295 L 295
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 132/267 (49%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+E GI P + + L+ C + A + F + + P V +Y++L+ G +
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 370
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL++EML +++ ++SLL+ + AG +D+A + M++ G ++++Y I
Sbjct: 371 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 430
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ C+ + + ++ +K N + NC+I LCK K+E A++L +++ G
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 490
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C +V+ A LI +M PD TYN +++ + +
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
++ M ++ P T S++V L K
Sbjct: 551 QLLHRMAQKDVSPDAITCSIVVDMLSK 577
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 14/287 (4%)
Query: 21 CKRKHVKVAH--QFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV 77
CK +V H FF + TP++ +++ L+ GL + S+ L+++M
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D N LL +C + E + G P+ +Y+ I C + I R+
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI------ERGANPDEWSYNAIL 191
M++ P+V TY +I+ LC + A +L EM+ E P+ +YN I+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C + A +L M + ++P +YN ++ G+++ + + + M +G
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
P + T++V++ LC K+GK+ EA K +M++ GI P Y+S +E
Sbjct: 283 PDMVTFNVLIDTLC-KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 328
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M GI + Y L LCK + A + F K F ++ + L+ GL G+
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF+++ +++ + ++ C+ G +D+A+ ++++M + G PD +Y+
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM-IER 178
+ F E+N + V ++L M + ++ P+ T + ++ L K+EK +E LL I++
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595
Query: 179 GAN 181
G +
Sbjct: 596 GVD 598
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G+ P ++ L + C +A + H Y +V GL G
Sbjct: 111 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR---GAVAYCTVVCGLYAHGHT 167
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR+LFD+ML ++ A N +L A+CK G++ EA +L ++ G + F+Y+I+
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I CEA + R++D M+ Y VP+V TYN +IR LCK +EA L M+ +G
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+++YN I+ +C + V A L+ + +PD+ TY ++ L G +RA E
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ + +G P + Y+ +V GLC +G + A + M +EG P T ++ N L
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLC-LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405
Query: 301 VGLG 304
+G
Sbjct: 406 CKMG 409
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + + ++ CK V+ A + +A + F P TY L+ GL G+
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF+E + DI+ +NSL++ +C G I A ++ EM G PD +Y+I
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ +I V++ +P+VFT+N +I CK K++ A QL++ M E G
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN++L C +VN M + P+ TYN++++ R + + A+
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V M + G +P +++ +++G C + G LE A F+ + ++G YS+T + N
Sbjct: 521 KVIVKMSQEGLHPDAVSFNTLIYGFC-RNGDLEGAYLLFQKLEEKG---YSATADTF-NT 575
Query: 300 LVG 302
L+G
Sbjct: 576 LIG 578
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 6/332 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + + L+ LCK+ + A + ++ P TY+ ++ G + + EA +L
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ + + D + + SL+ +C G+++ A + E ++ G +PD Y+ + C
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I +V++ M P++ TYN +I LCK + +A ++++ I +G PD ++
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N ++ +C R +++ AL+L+ RM + + PD TYN VL L + G+ + E ++ M
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G +P+ TY++++ C+ K+EEA K M EG+ P + + L G L
Sbjct: 493 LKGCHPNPITYNILIENFCRSN-KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551
Query: 307 DIIEILADKMER----STSCTIQELANAMRGK 334
+ +L K+E +T+ T L A GK
Sbjct: 552 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 38/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ + P++ +++LHALCKR V A + + + TY+I +RGL + G
Sbjct: 177 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 236
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L D M P D++ +N+L+ +CK EA LR M + G PD F+Y+
Sbjct: 237 LPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + + +L VP+ TY +I LC VE A +L +E +G
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG------ 233
PD YN+++ C + + AL+++ M +E PD TYN+V+ L ++G
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 415
Query: 234 -----------------------------RFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ D A ++ E M + G P TY+ +++GL
Sbjct: 416 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 475
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C K GK+ E + F+ M+ +G P T +L
Sbjct: 476 C-KAGKVNEVNETFQEMILKGCHPNPITYNIL 506
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P L++ LC V+ A + F+ A+ + P + Y+ LV+GL G + A
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM E C DI +N ++ +CK GNI +A ++ + G PD F+++ I
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + S ++++ M Y + P+ TYN ++ LCK KV E + EMI +G +P+
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C ++ A ++I +M++E + PD ++N ++ R G + A +++
Sbjct: 500 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 559
Query: 244 SMEKRGFYPSVST-----------------------------------YSVMVHGLCKKK 268
+E++G+ + T Y V++ G C K
Sbjct: 560 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC-KT 618
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
++ A + M+ +G P ST + N L
Sbjct: 619 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P I + +++ LCK ++ A ++A + + P V T++ L+ G +
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L + M E D + +NS+L +CKAG ++E + +EM G P+ +Y+I
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC +N + +V+ M + L P+ ++N +I C+N +E AY L ++ E+G
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + ++MA ++ M + D +TY +++ + DRA
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K+GF PS+ST+ +++ L ++ +A +MV G+ P
Sbjct: 626 MHLVEMIKKGFIPSMSTFGRVINSLTVNH-RVFQAVGIIHIMVKIGVVP 673
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + L+ CKR + A Q + ++ P TY+ ++ GL G+++E
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 484
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F EM+ + C + + +N L+E C++ ++EA ++ +M G PDA S++ I+
Sbjct: 485 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC D+ + + ++ T+N +I + A ++ DEM+ +G D
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y ++ C A V+ A + M K+ +P T+ V+ L R +A +
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 664
Query: 244 SMEKRGFYPSV 254
M K G P V
Sbjct: 665 IMVKIGVVPEV 675
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 73/356 (20%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y +R G L +A F+ M CP A+N++++A+ A D+AH + M
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVL----------------------------- 137
+ G PD +++I + +FC H R+L
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172
Query: 138 --DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---------------- 179
D M ++ PN+ +N ++ LCK V EA LL ++I+RG
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232
Query: 180 ------------------ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
A PD +YN ++ C ++ A+ + RM + +PD T
Sbjct: 233 EAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ ++ ATE+ + +GF P TY +++GLC +G +E A + F
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC-AEGDVERALELFNEA 351
Query: 282 VDEGIPP----YSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
+GI P Y+S V+ L L GL L ++++ + E IQ + G
Sbjct: 352 QAKGIKPDIVVYNSLVKGL--CLQGL-ILHALQVMNEMAEEGCHPDIQTYNIVING 404
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 2/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + L+H LCK + A + + K F P V TY+I++ G +
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L +EM + ++ +N ++ A+CK G +DEA G+++EMRS G PD SY+ I+
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + +++ +V N TYN II L ++ + ++A +L EMI G + D
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ C V+ +L L+ M ++ + P+ +YN+++ L + R A E+ +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P + TY+ +++GLC K G + A E + +E + P T +L + +
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLC-KMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639
Query: 304 GFLDIIEILADK 315
LD +L ++
Sbjct: 640 RLLDDAAMLLNR 651
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P + LL LC+ + A V ++ ++ G G+L
Sbjct: 271 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL---NVVLFNTVIGGCLAEGKL 327
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EA +L++ M + C D ++ L+ +CK G I A +LREM G P+ +Y+I
Sbjct: 328 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIV 387
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H+FC+ +L+ M L N YN +I LCK+ +++EA L+ EM +G
Sbjct: 388 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 447
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
NPD SYN I+ + C+ ++ A + + +E V+ + TYN ++ L+R GR+ A
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVR 507
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M G V +Y+ ++ +C K G ++ + E M ++GI P + + +L + L
Sbjct: 508 LAKEMILHGCSLDVVSYNGLIKAMC-KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 8/292 (2%)
Query: 29 AHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEMLER-KCPVDILAHNSL 85
A D F P+ ++Y++++ L ++A L+ M+ R + P
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
A+C+ G DEA +LR M G PDA Y IHA C+ + +L+ M
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+V T++ ++R +C +V EA +L+D M+ +G P +Y +L C + + A
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ R+ + NV+ +N V+ + G+ ATE++E+M +G P TYS+++HGLC
Sbjct: 302 MLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
K G++ A + M +G P T ++ + G D L ++M
Sbjct: 358 -KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 6/284 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ + ALC+ A A+H P Y ++ L D G ++EA
Sbjct: 171 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EML C D+ + ++ MC G + EA ++ M + G P +Y +
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C +L + N+V +N +I K+ EA +L + M +G PD
Sbjct: 291 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ ++ C + A+RL+ M K+ P+ TY +VL + G +D + E
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +G + Y+ M++ LC K G+++EA + M +G P
Sbjct: 407 MSAKGLTLNSQGYNGMIYALC-KDGRMDEAMGLIQEMRSQGCNP 449
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 6/239 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
++N +L + +A +A + R M P F++ + A C +L
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRG 200
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M R+ VP+ Y +I LC V EA LL+EM+ G D +++ ++ C
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V A RL+ RM + MP TY +L+ L RV + D A +M R +V ++
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNT 316
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ G C +GKL EA + +E M +G P + T +L + L LG + L +ME+
Sbjct: 317 VIGG-CLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 148/328 (45%), Gaps = 2/328 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V +A + + PT Y+ L+ G GEL A
Sbjct: 335 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 394
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F +M R D + +N+L+ +CKA I A +L EM+ G P +++ I A
Sbjct: 395 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 454
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F VL M+ L PNV +Y I+ CKN K+ EA +LD+M + P+
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNAI+ + + + A L+ +M + P TYN+++K L + A E+
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 574
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ P +Y+ ++ C +G +++A + M GI T L + L G
Sbjct: 575 SLSNHRLIPDAVSYNTLISACC-YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 633
Query: 304 GFLDIIEILADKMERSTSCTIQELANAM 331
G L+ +E L KM ++ + N M
Sbjct: 634 GRLNEMEYLYQKMMQNNVVPSNAIHNIM 661
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 41/373 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + LL LC+ + D A + P TYSIL GL G+
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF + L+ + + LL +CK G + A +L+ + + G P Y+
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 380
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ ++ F MK ++ P+ TYN +I LCK E++ A LL EM + G
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440
Query: 180 ANP---------DEW--------------------------SYNAILAYHCDRAEVNMAL 204
NP D + SY +I+ C ++ A+
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V+P+ YN ++ V G D+A + E M+ G PS+ TY++++ GL
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME----RST 320
C + ++ EA + + + + P + + L + G +D L +M +ST
Sbjct: 561 CNQS-QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 619
Query: 321 SCTIQELANAMRG 333
T +L + + G
Sbjct: 620 VRTYHQLISGLGG 632
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGDVGELS 61
IKP + L++ LCK + + A DN PTV+T++ L+ G G+L
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNG---VNPTVETFNTLIDAYGRTGQLE 462
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ + EM E +++++ S++ A CK G I EA +L +M P+A Y+ I
Sbjct: 463 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 522
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A+ E F +++ MK + P++ TYN +I+ LC ++ EA ++++ +
Sbjct: 523 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 582
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SYN +++ C R ++ AL L RM K + TY+ ++ L GR + +
Sbjct: 583 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 642
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCK 266
++ M + PS + +++MV K
Sbjct: 643 YQKMMQNNVVPSNAIHNIMVEAYSK 667
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 37/348 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + + ++ + + A + FD + P TY+ ++ G G+L +L
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY--------- 117
D+M+ + + +N LL +C+AG + E +L EM S PD F+Y
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317
Query: 118 --------------------------SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
SI ++ C+ + VL S+ LVP
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I C+ ++E A+ +M R PD +YNA++ C + A L+ M
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
V P T+N ++ R G+ ++ V M++ G P+V +Y +V+ C K GK+
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKI 496
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
EA + M + + P + + + V G D IL +KM+ +
Sbjct: 497 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 544
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 24 KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM-LERKCPVDILAH 82
+H V F A P ++ V+ G+L EA + M + P + ++
Sbjct: 144 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 203
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N ++ M +AG +A + EM P+ +Y+ I + D+ + FR+ D M
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 263
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ L PN TYN ++ LC+ ++ E LLDEM + PD ++Y+ + +
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
L L + K V +T +++L L + G+ A EV +S+ G P+ Y+ +++
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G C + G+LE A F M I P T L N L
Sbjct: 384 GYC-QTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 420
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------------------- 39
M E G+KP++ +++A CK + A D+ H+
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530
Query: 40 ---------------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
+P++ TY++L++GL + ++SEA ++ + + + D +++N+
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 590
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A C GNID+A + + M G + +Y I A ++ + + M + N
Sbjct: 591 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 650
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+VP+ +N ++ K +A L EM+++ N D+
Sbjct: 651 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 690
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 142/282 (50%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P + L+H LCK + A FD P YSI++ GL +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A++LF +M C D++ +N LL CK+G +D+A +L+ + G Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ A M R N+ P+V Y +IR L + +V EA LL EM ERG
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YNA++ CD ++ A L ++K + P+ HTY++++ + + G ++A
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++ MEK G PSV T++ +++GLCK +LEEA F M
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKAN-RLEEARLLFYQM 469
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
+ +S+L+ + G +A + F M + C D+ A N +L + + A + +
Sbjct: 129 EAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQ 188
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M PD +Y I IH C+ + D M ++PN Y+ ++ LC+ +K
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ +A +L +M G N D +YN +L C ++ A L+ +TK+ + Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ L R R++ A ++ M + P V Y++M+ GL ++G++ EA M +
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGL-SQEGRVTEALTLLGEMTER 367
Query: 285 GIPPYSSTVEMLRNRLVGLGFLD 307
G+ P + L +G+LD
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLD 390
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 9/257 (3%)
Query: 40 FTPTVKTYSILVRGLGD--VGELSEAR------KLFDEMLERKCPVDILAHNSLLEAMCK 91
F ++K++ + R + D +G+L + K+ E+ + A + L+EA +
Sbjct: 81 FIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSE 140
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
AG ++A MR +PD F++++ +H V + M + NL P+V T
Sbjct: 141 AGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVT 200
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I LCK K ++A L DEM +RG P++ Y+ +L+ C ++ A RL ++M
Sbjct: 201 YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
D TYN++L + G D A + + + K G V Y +++GL + + +
Sbjct: 261 ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR-RY 319
Query: 272 EEACKYFEMMVDEGIPP 288
EEA +++ M+ E I P
Sbjct: 320 EEAHMWYQKMLRENIKP 336
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 112/220 (50%), Gaps = 14/220 (6%)
Query: 8 PSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+ +CK + K H F + K P+V T++ L+ GL L EAR L
Sbjct: 406 PNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLL 465
Query: 67 FDEMLERKCP-------------VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
F +M + P DI + ++E +C++G I +A+ +L ++ G PD
Sbjct: 466 FYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPD 525
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+Y+I I+ FC+ +I+ F++ M+ +P+ TY +I L + + E+A ++ +
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+M+++G P+ +Y I+ + C +++AL + + ++
Sbjct: 586 QMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD 625
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I + N ++VL +K + + ++ +I + E+A + M +
Sbjct: 98 LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDF 157
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +++N IL + + +AL + +M K N+ PD TY +++ L + + A
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M RG P+ YS+++ GLC+ K K+ +A + F M G T +L N
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGLCQAK-KIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 299 RLVGLGFLD 307
G+LD
Sbjct: 277 GFCKSGYLD 285
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 43/249 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+V+ G+ P I + L++ CK ++ A + F + + P TY L+ GL G
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM----LREMRS-------I 108
+A ++F++M+++ C + + +++ C+ NI A + LR+ R +
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRV 636
Query: 109 GAEP-----------------------DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
AE D Y+IF+ +A F + +K + +
Sbjct: 637 VAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKM 696
Query: 146 VPNVFTYNCI--IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA--YHCDRAEVN 201
N+ + +C+ I +LC E ++ A + +ERG N +L H DR +
Sbjct: 697 --NISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDD- 753
Query: 202 MALRLITRM 210
AL L RM
Sbjct: 754 -ALFLANRM 761
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G+ P ++ L + C +A + H Y +V GL G
Sbjct: 112 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR---GAVAYCTVVCGLYAHGHT 168
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR+LFD+ML ++ A N +L A+CK G++ EA +L ++ G + F+Y+I+
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I CEA + R++D M+ Y VP+V TYN +IR LCK +EA L M+ +G
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+++YN I+ +C + V A L+ + +PD+ TY ++ L G +RA E
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ + +G P + Y+ +V GLC +G + A + M +EG P T ++ N L
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLC-LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406
Query: 301 VGLG 304
+G
Sbjct: 407 CKMG 410
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + + ++ CK V+ A + +A + F P TY L+ GL G+
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF+E + DI+ +NSL++ +C G I A ++ EM G PD +Y+I
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ +I V++ +P+VFT+N +I CK K++ A QL++ M E G
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN++L C +VN M + P+ TYN++++ R + + A+
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V M + G +P +++ +++G C + G LE A F+ + ++G YS+T + N
Sbjct: 522 KVIVKMSQEGLHPDAVSFNTLIYGFC-RNGDLEGAYLLFQKLEEKG---YSATADTF-NT 576
Query: 300 LVG 302
L+G
Sbjct: 577 LIG 579
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 6/332 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + + L+ LCK+ + A + ++ P TY+ ++ G + + EA +L
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ + + D + + SL+ +C G+++ A + E ++ G +PD Y+ + C
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I +V++ M P++ TYN +I LCK + +A ++++ I +G PD ++
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N ++ +C R +++ AL+L+ RM + + PD TYN VL L + G+ + E ++ M
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G +P+ TY++++ C+ K+EEA K M EG+ P + + L G L
Sbjct: 494 LKGCHPNPITYNILIENFCRSN-KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552
Query: 307 DIIEILADKMER----STSCTIQELANAMRGK 334
+ +L K+E +T+ T L A GK
Sbjct: 553 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 38/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ + P++ +++LHALCKR V A + + + TY+I +RGL + G
Sbjct: 178 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L D M P D++ +N+L+ +CK EA LR M + G PD F+Y+
Sbjct: 238 LPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 296
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + + +L VP+ TY +I LC VE A +L +E +G
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG------ 233
PD YN+++ C + + AL+++ M +E PD TYN+V+ L ++G
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416
Query: 234 -----------------------------RFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ D A ++ E M + G P TY+ +++GL
Sbjct: 417 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 476
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C K GK+ E + F+ M+ +G P T +L
Sbjct: 477 C-KAGKVNEVNETFQEMILKGCHPNPITYNIL 507
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P L++ LC V+ A + F+ A+ + P + Y+ LV+GL G + A
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM E C DI +N ++ +CK GNI +A ++ + G PD F+++ I
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + S ++++ M Y + P+ TYN ++ LCK KV E + EMI +G +P+
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C ++ A ++I +M++E + PD ++N ++ R G + A +++
Sbjct: 501 PITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ 560
Query: 244 SMEKRGFYPSVST-----------------------------------YSVMVHGLCKKK 268
+E++G+ + T Y V++ G C K
Sbjct: 561 KLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC-KT 619
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
++ A + M+ +G P ST + N L
Sbjct: 620 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P I + +++ LCK ++ A ++A + + P V T++ L+ G +
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 446
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L + M E D + +NS+L +CKAG ++E + +EM G P+ +Y+I
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC +N + +V+ M + L P+ ++N +I C+N +E AY L ++ E+G
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + ++MA ++ M + D +TY +++ + DRA
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K+GF PS+ST+ +++ L ++ +A +MV G+ P
Sbjct: 627 MHLVEMIKKGFIPSMSTFGRVINSLTVNH-RVFQAVGIIHIMVKIGVVP 674
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + L+ CKR + A Q + ++ P TY+ ++ GL G+++E
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 485
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F EM+ + C + + +N L+E C++ ++EA ++ +M G PDA S++ I+
Sbjct: 486 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC D+ + + ++ T+N +I + A ++ DEM+ +G D
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y ++ C A V+ A + M K+ +P T+ V+ L R +A +
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 665
Query: 244 SMEKRGFYPSV 254
M K G P V
Sbjct: 666 IMVKIGVVPEV 676
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 73/356 (20%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y +R G L +A F+ M CP A+N++++A+ A D+AH + M
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVL----------------------------- 137
+ G PD +++I + +FC H R+L
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173
Query: 138 --DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---------------- 179
D M ++ PN+ +N ++ LCK V EA LL ++I+RG
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233
Query: 180 ------------------ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
A PD +YN ++ C ++ A+ + RM + +PD T
Sbjct: 234 EAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ ++ ATE+ + +GF P TY +++GLC +G +E A + F
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC-AEGDVERALELFNEA 352
Query: 282 VDEGIPP----YSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
+GI P Y+S V+ L L GL L ++++ + E IQ + G
Sbjct: 353 QAKGIKPDIVVYNSLVKGL--CLQGL-ILHALQVMNEMAEEGCHPDIQTYNIVING 405
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 142/282 (50%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P + L+H LCK + A FD P YSI++ GL +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A++LF +M C D++ +N LL CK+G +D+A +L+ + G Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ A M R N+ P+V Y +IR L + +V EA LL EM ERG
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YNA++ CD ++ A L ++K + P+ HTY++++ + + G ++A
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++ MEK G PSV T++ +++GLCK +LEEA F M
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKAN-RLEEARLLFYQM 469
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 1/268 (0%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
+ +S+L+ + G +A + F M + C D+ A N +L + + A + +
Sbjct: 129 EAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQ 188
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M PD +Y I IH C+ + D M ++PN Y+ ++ LC+ +K
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ +A +L +M G N D +YN +L C ++ A L+ +TK+ + Y
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ L R R++ A ++ M + P V Y++M+ GL ++G++ EA M +
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGL-SQEGRVTEALTLLGEMTER 367
Query: 285 GIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
G+ P + L +G+LD E L
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESL 395
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 9/257 (3%)
Query: 40 FTPTVKTYSILVRGLGD--VGELSEAR------KLFDEMLERKCPVDILAHNSLLEAMCK 91
F ++K++ + R + D +G+L + K+ E+ + A + L+EA +
Sbjct: 81 FIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSE 140
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
AG ++A MR +PD F++++ +H V + M + NL P+V T
Sbjct: 141 AGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVT 200
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I LCK K ++A L DEM +RG P++ Y+ +L+ C ++ A RL ++M
Sbjct: 201 YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
D TYN++L + G D A + + + K G V Y +++GL + + +
Sbjct: 261 ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR-RY 319
Query: 272 EEACKYFEMMVDEGIPP 288
EEA +++ M+ E I P
Sbjct: 320 EEAHMWYQKMLRENIKP 336
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 112/220 (50%), Gaps = 14/220 (6%)
Query: 8 PSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+ +CK + K H F + K P+V T++ L+ GL L EAR L
Sbjct: 406 PNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLL 465
Query: 67 FDEMLERKCP-------------VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
F +M + P DI + ++E +C++G I +A+ +L ++ G PD
Sbjct: 466 FYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPD 525
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+Y+I I+ FC+ +I+ F++ M+ +P+ TY +I L + + E+A ++ +
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+M+++G P+ +Y I+ + C +++AL + + ++
Sbjct: 586 QMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD 625
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I + N ++VL +K + + ++ +I + E+A + M +
Sbjct: 98 LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDF 157
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD +++N IL + + +AL + +M K N+ PD TY +++ L + + A
Sbjct: 158 DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDA 217
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M RG P+ YS+++ GLC+ K K+ +A + F M G T +L N
Sbjct: 218 LVLFDEMTDRGILPNQIIYSIVLSGLCQAK-KIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 299 RLVGLGFLD 307
G+LD
Sbjct: 277 GFCKSGYLD 285
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 39/216 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+V+ G+ P I + L++ CK ++ A + F + + P TY L+ GL G
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM----LREMRS-------I 108
+A ++F++M+++ C + + +++ C+ NI A + LR+ R +
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRV 636
Query: 109 GAEP-----------------------DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
AE D Y+IF+ +A F + +K + +
Sbjct: 637 VAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKM 696
Query: 146 VPNVFTYNCI--IRKLCKNEKVEEAYQLLDEMIERG 179
N+ + +C+ I +LC E ++ A + +ERG
Sbjct: 697 --NISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +I + L+ C + D K + P V T+S+L+ G+L EA
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM+ R D + + SL++ CK ++D+A+ M+ M S G +P+ +++I I+
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M +V + TYN +I+ C+ K+ A +L EM+ R P+
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E AL + ++ K + D YN+++ + + D A +++
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P V TY++M+ GLC KKG L EA F M ++G P T +L +G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLC-KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 304 G 304
G
Sbjct: 592 G 592
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----------------------------HQF 32
MVE+G +P+ +L+ +CK +A H
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 33 FDNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
DNA + F T + TY+IL+ G + G + KL +M++RK +++ +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+++ K G + EA + +EM G PD +Y+ I FC+ N + +++D M
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PN+ T+N +I CK ++++ +L +M RG D +YN ++ C+ ++N+A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M V P+ TY ++L L G ++A E++E +EK + Y++++HG+
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
C K+++A F + +G+ P T ++ L G L E+L KME
Sbjct: 519 CNAS-KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + ++ L++ LC A D ++ P TY ++ + G+
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M ER +D + ++ +++ +CK G++D A + EM G + +Y+I
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A ++L M + + PNV T++ +I K K+ EA +L EMI RG
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +++ C ++ A +++ M + P+ T+N+++ + R D
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ G C+ GKL A + F+ MV +PP T ++L +
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCEL-GKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 300 LVGLG 304
L G
Sbjct: 483 LCDNG 487
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++Y L +++ C+ + + +A K + P T+S L+ GL G +SEA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+E D++ N+L+ +C +G EA ++ +M G +P+A +Y ++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ +L M+ N+ + Y+ II LCK+ ++ A+ L +EM +G +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C+ + +L+ M K + P+ T+++++ V+ G+ A E+ +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TY+ ++ G CK+ L++A + ++MV +G P T +L N
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKEN-HLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L++ LC V A + D + P + T + LV GL G+
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA L D+M+E C + + + +L MCK+G A +LR+M + DA YSI
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + F + + M+ + N+ TYN +I C + ++ +LL +MI+R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++ ++ ++ A L M + PD TY ++ + D+A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M +G P++ T++++++G CK ++++ + F M G+ + T L
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKAN-RIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 300 LVGLGFLDIIEILADKM 316
LG L++ + L +M
Sbjct: 448 FCELGKLNVAKELFQEM 464
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CK H+ A+Q D P ++T++IL+ G
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +N+L++ C+ G ++ A + +EM S P+ +Y I
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + ++ YN II +C KV++A+ L + +G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C + ++ A L +M ++ PD TYN++++ + G ++
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ E +++ GF ST +++ L G+L+++ + +M+
Sbjct: 599 KLIEELKRCGFSVDASTIKMVIDML--SDGRLKKS--FLDML 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV +S L + + L +M + ++ + ++ C+ + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ ++ +G EP+ ++S I+ C + ++D M P++ T N ++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D+M+E G P+ +Y +L C + +A+ L+ +M + N+ D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y++++ L + G D A ++ ME +G ++ TY++++ G C G+ ++ K M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC-NAGRWDDGAKLLRDM 324
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFL 306
+ I P T +L + V G L
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKL 349
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L GL D+ + +A LF +M+ + ++ + L A+ K D + ++M G
Sbjct: 60 LRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ ++ SI I+ FC + F + + + PN T++ +I LC +V EA
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L+D M+E G PD + N ++ C + A+ LI +M + P+ TY VL ++
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ G+ A E+ ME+R YS+++ GLC K G L+ A F M +GI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC-KHGSLDNAFNLFNEMEMKGITTN 297
Query: 290 SSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T +L G + D ++L D ++R
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 151/287 (52%), Gaps = 13/287 (4%)
Query: 8 PSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
P ++ + LL+ LC ++ +++ H D+ + P V +YS ++ G G+L
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGG-DCPPDVVSYSTVINGFFKEGDL--- 104
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+ML+++ +++ +NS++ A+CKA +D+A +L M G PD +Y+ +H
Sbjct: 105 ----DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + L M+ + P+V TYN ++ LCKN + EA ++ D M +RG PD
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L + + + L+ M + + P+ + +++++ + + + A V+
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P S
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLC-KSGRVEDAMLYFEQMIDEGLRPDS 326
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFSYSI 119
+AR +FDE+L R P D+ ++N LL +C EA +L M G + PD SYS
Sbjct: 35 DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + D LD M + PNV TYN II LCK + V++A ++L M++ G
Sbjct: 94 VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+I+ C + A+ + +M + V PD TYN ++ L + GR A
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++SM KRG P ++TY ++ G KG L E ++MV GI P
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHP 254
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P++ + ++ ALCK + V A + K P TY+ +V G G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA + M G +PD +Y
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ ++ K EKVEEA + +M ++G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +Y ++ C V A+ +M E + PD YN ++ L ++++A
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M RG S ++ ++ C K+G++ E+ K F++MV G+ P
Sbjct: 347 ELFLEMLDRGICLSTIFFNSIIDSHC-KEGRVIESGKLFDLMVRIGVKP 394
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 162/415 (39%), Gaps = 92/415 (22%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + ++H C K A F + + P V TY+ L+ L G
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R DI + +LL+ G + E HG+L M G P+ + +SI
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 180 ANP---------------DEWS--------------------YNAILAYHCDRAEVNMAL 204
P D+W +N+I+ HC V +
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381
Query: 205 RLITRMTKENVMPD-----------RHTYNMVLKL------LVRVGRFDRATEV----WE 243
+L M + V PD R Y++ + + + G ++ T V
Sbjct: 382 KLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGN 441
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK----------------------------------G 269
+ P + TY++++HGLCK K G
Sbjct: 442 TASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 501
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
+ +EA F G+ P T ++ ++G G L+ ++ L ME CT+
Sbjct: 502 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME-DNGCTV 555
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 20/307 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P+ ++ LCK V+ A +F+ E P Y+ L+ L +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF EML+R + + NS++++ CK G + E+ + M IG +PD
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD------ 395
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLVPNV-FTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I ++ R L S +R Y+L N+ F + + K ++ +
Sbjct: 396 ----------IITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASN 445
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
P +YN IL C + ALR+ + ++ + T+N+++ L++VGR D
Sbjct: 446 SSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 505
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A +++ + G P+ TY +M + +G LEE + F M D G S + +
Sbjct: 506 AKDLFVAFSSNGLVPNYWTYRLMAENII-GQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 564
Query: 298 NRLVGLG 304
L+ G
Sbjct: 565 RELLQRG 571
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL------------------------ 171
V D + R +P+VF+YN ++ LC + +EA +L
Sbjct: 39 VFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 172 ------LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
LD+M+++ +P+ +YN+I+A C V+ A+ ++T M K VMPD TYN +
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G+ A + M G P V TY+ ++ LC K G+ EA K F+ M G
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC-KNGRCTEARKIFDSMTKRG 216
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ P +T L G L + L D M R+
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 43/244 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G+KP I L + F +A+ +++ V Y I + + G+
Sbjct: 387 MVRIGVKPDIITLGR----------------FLGSARRDYSLFVNIYFIFTN-MSNTGDK 429
Query: 61 SEARKLFDEMLERKCPVD---------------ILAHNSLLEAMCKAGNIDEAHGMLREM 105
E++ PV+ + +N +L +CK D+A M + +
Sbjct: 430 -----------EKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNL 478
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ + +A +++I I A + + + LVPN +TY + + +
Sbjct: 479 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 538
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EE QL M + G D N I+ R E+ A ++ + +++ + T ++
Sbjct: 539 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 598
Query: 226 LKLL 229
+ LL
Sbjct: 599 IDLL 602
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV GI P+++ + ++ +CK + A F+ K TP + TY+ L+ G G +G
Sbjct: 123 MVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E+ LF+EM C D++ +N+L+ + CK + A REM+ +P+ SYS
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + M R L+PN FTY+ +I CK + EA+ L DEM++
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ + +Y +L C+ +N A L M K V P+ Y ++ ++V D+A
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E++ M ++ P + + +V GLC + KLEE M + GI
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSES-KLEECKIIMTEMKESGI 408
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +F + P + LH L K ++ FF D PTV TY+I++ + G+
Sbjct: 88 MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR LF++M + DI+ +N+L++ K G +DE+ + EM+ +G EPD +Y+
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC+ + F MK +L PNV +Y+ +I LCK ++ A + +M G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E++Y++++ +C + A L M +E+V + TY +L L G + A
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAE 327
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ +M K G P++ Y+ ++HG K + +++A + F M ++ I P
Sbjct: 328 ELFRAMGKAGVTPNLQAYTALIHGHIKVR-SMDKAMELFNEMREKDIKP 375
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP++ L+ ALCK +++A +FF D + P TYS L+ G L EA
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAF 292
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEML+ ++I+ + +LL+ +C+ G ++EA + R M G P+ +Y+ IH
Sbjct: 293 MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGH 352
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + + + M+ ++ P++ + I+ LC K+EE ++ EM E G +
Sbjct: 353 IKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANP 412
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
Y ++ + A+ L+ M T+ ++ L + G A +
Sbjct: 413 VIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGR 472
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M P+V+ Y+ ++ GLCK + +A K F+ M D+ + P
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNC-IGDAKKLFDEMQDKNMIP 515
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 7/304 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + + L+++ CK K + A +FF K + P V +YS L+ L G + A
Sbjct: 197 GCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMA 256
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F +M + ++SL++A CKAGN+ EA + EM + + +Y+ +
Sbjct: 257 IKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDG 316
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
CE ++ + +M + + PN+ Y +I K +++A +L +EM E+ PD
Sbjct: 317 LCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ I+ C +++ ++T M + + + Y ++ + G A + E
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RN 298
M G +V T+ ++ GLC K+G ++EA YF M D + P Y++ ++ L +N
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLC-KRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKN 495
Query: 299 RLVG 302
+G
Sbjct: 496 NCIG 499
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 129/282 (45%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L + ++ A Q F K P ++ + + L GE +R
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N ++ +CK G++ A + +M+ +G PD +Y+ I + +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + + MK P+V TYN +I CK + + A++ EM ++ P+ S
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + MA++ MT+ ++P+ TY+ ++ + G A + + M
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ ++ TY+ ++ GLC ++G + EA + F M G+ P
Sbjct: 300 QEHVDLNIVTYTTLLDGLC-EEGMMNEAEELFRAMGKAGVTP 340
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 6/289 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G+ P++ L+H K + + A + F+ + + P + + +V GL +
Sbjct: 333 MGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESK 392
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E + + EM E + + + +L++A KAGN EA +L EMR +G E ++
Sbjct: 393 LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + M ++L PNV Y +I LCKN + +A +L DEM ++
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y A++ + AL + +M + + D + Y ++ L + G+ +A
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQAR 572
Query: 240 EVWESMEKRGFYP--SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M +G P ++ T + H + G ++EA + +V++G+
Sbjct: 573 KFLAEMIGKGIIPDETLCTRLLRKH---YELGNIDEAIELQNELVEKGL 618
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
++L + + G ++ A M P A S + F+H +A + M
Sbjct: 66 DALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVG 125
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ P VFTYN +I +CK + A L ++M + G PD +YN ++ + ++
Sbjct: 126 AGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDE 185
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
++ L M PD TYN ++ + RA E + M+ + P+V +YS ++
Sbjct: 186 SVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLID 245
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
LCK+ G ++ A K+F M G+ P T L + G L +LAD+M
Sbjct: 246 ALCKE-GMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G + ++ L+ LCKR V+ A +F H+ P V Y+ L+ GL
Sbjct: 438 MRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNC 497
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+KLFDEM ++ D +A+ ++++ K GN EA M +M +G E D ++Y+
Sbjct: 498 IGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTS 557
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + +V++A + L EMI +G
Sbjct: 558 LVWGLSQCG-----------------------------------QVQQARKFLAEMIGKG 582
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PDE +L H + ++ A+ L + ++ ++
Sbjct: 583 IIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P ++A+ + + + A + RMTK V+P + N L L + G D + +
Sbjct: 60 PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M G P+V TY++M+ +CK+ G + A FE M G+ P T L +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKE-GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178
Query: 302 GLGFLD 307
+G LD
Sbjct: 179 KIGLLD 184
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
VF +L + R VP ++ + L + +E A Q M + P S NA L
Sbjct: 47 VFEILWT-TRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLH 105
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
E +++ M + P TYN+++ + + G A ++E M+K G P
Sbjct: 106 RLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTP 165
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ TY+ ++ G K G L+E+ FE M G P T L N
Sbjct: 166 DIVTYNTLIDGY-GKIGLLDESVCLFEEMKFMGCEPDVITYNALIN 210
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP ++ + +++ LCK K+++ + K +P TY+IL+ + +A
Sbjct: 423 GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FDEM + D+++ ++L+ + K G +D+A R+M++ G PD Y+I I
Sbjct: 483 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 542
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +V D M +V TYN I+ LCK + + EA +L EM ERG PD
Sbjct: 543 FCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 602
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ + +N A+ L M + N+ PD TYN ++ + ++ E+W
Sbjct: 603 FYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 662
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M R YP+ +Y ++++G C G + EA + ++ MV++G
Sbjct: 663 DMISRRIYPNHISYGILINGYC-NMGCVSEAFRLWDEMVEKG 703
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 37/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + L+ L K + A ++F + K+ P Y+IL+ G G +SEA
Sbjct: 493 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 552
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ DEMLE+ C +D++ +N++L +CK + EA + EM G PD ++++ I+
Sbjct: 553 LKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 612
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +++ + + M + NL P+V TYN +I CK ++E+ +L ++MI R P+
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672
Query: 184 EWSYNAILAYHCDRAEVNMALRL-----------------------------------IT 208
SY ++ +C+ V+ A RL ++
Sbjct: 673 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 732
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + ++PD TYN ++ ++ DRA + ME G P V TY+V+++G ++
Sbjct: 733 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF-SRQ 791
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
G+++EA M++ G+ P ST L N
Sbjct: 792 GRMQEAELIMLKMIERGVNPDRSTYTSLIN 821
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+V G++ ++Y L+ +++ALCK + ++ F + + + P V TY+ L+ G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +L D M + + +N+++ +CK G A G+L EM IG PD +Y+I
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C +++ R+ D M +VP++ +++ +I L KN +++A + +M G
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++ C ++ AL++ M ++ D TYN +L L + A
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M +RG +P T++ +++G K G + +A FEMM+ + P
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGY-XKDGNMNKAVTLFEMMIQRNLKP 636
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 4/282 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++DL L+ + + ++ + F K + ++ + L+ GL VG + A
Sbjct: 285 GSNPLVFDL--LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ E++ V++ N ++ A+CK I+ L +M G PD +Y+ I+A
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + F ++DSM L P VFTYN II LCK K A +LDEM++ G +PD
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C + A R+ M + V+PD +++ ++ LL + G D+A + +
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M+ G P Y++++ G C + G + EA K + M+++G
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFC-RNGVMSEALKVRDEMLEQG 563
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G + + +L+ LCK K + A + F + + P T++ L+ G G
Sbjct: 559 MLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGN 618
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF+ M++R D++ +N+L++ CK +++ + + +M S P+ SY I
Sbjct: 619 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGI 678
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + FR+ D M + T N I++ C+ +A + L M+ +G
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ ++ A L+ +M ++PD TYN++L R GR A
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAE 798
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M +RG P STY+ +++G + L+EA + + M+ G P
Sbjct: 799 LIMLKMIERGVNPDRSTYTSLINGHVTQN-NLKEAFRVHDEMLQRGFVP 846
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ +KP + + L+ CK + KV + D P +Y IL+ G ++G
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +L+DEM+E+ I+ N++++ C+AGN +A L M G PD +Y+
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + ++ F +++ M+ L+P+V TYN I+ + +++EA ++ +MIERG
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
NPD +Y +++ H + + A R+ M + +PD
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
N N ++ ++R + K+ E + + +G + N++L V++A
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ + + V + +T N+++ L + + + ME++G +P V TY+ +++
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
C ++G LEEA + + M +G+ P T + N L G
Sbjct: 403 YC-RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG 442
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + +++A CK +V VA +F K F TY+ L+ G + E
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A K+F+ M + C + +++ +L+ C+ G IDEA + +M+ G PD +Y++
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFCE + + M + PNV+TY +I CK K++E ++L M+E+G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+NA++ +C R + A+ ++ M V P+ TYN ++ R DRA
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAM 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + P++ TY+ ++HGLCK + ++ A + +M+ +G P T +
Sbjct: 421 ALLNKMYENKLSPNLVTYNTLIHGLCKAR-VVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479
Query: 300 LVGLG 304
L +G
Sbjct: 480 LCKMG 484
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+H C+ + A + F K + P V TY++LV +VG+ +EA K F+EM+E
Sbjct: 265 NLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN 324
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
++ + L++ CK G +DE ML M G ++ I +C+ +
Sbjct: 325 GIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDA 384
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
VLDSMK + PN TYN +I C+ + ++ A LL++M E +P+ +YN ++
Sbjct: 385 ICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHG 444
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C V+ A RL M K+ +PD+ T+ + L ++G+ ++A +V+ES++++ +
Sbjct: 445 LCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN 504
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ G CK + K +A F+ M+ EG P S T +L + L G ++ L
Sbjct: 505 EFLYTALIDGYCKAE-KFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563
Query: 314 DKMER 318
D M +
Sbjct: 564 DVMGK 568
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+E G+ S+ + L+ CKR ++ A D+ K ++ P +TY+ L+ G
Sbjct: 356 MLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS 415
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M E K +++ +N+L+ +CKA +D A + M G PD ++
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ + +V +S+K + N F Y +I CK EK +A+ L M+ G
Sbjct: 476 FIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG 535
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N +L +V A+ L+ M K + P HTY ++++ ++R FDRA
Sbjct: 536 CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRAN 595
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M G P+V TY+ + C ++G+L EA + + +EGI S ++L N
Sbjct: 596 MFLDQMISSGCQPNVVTYTAFIKAYC-RQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654
Query: 300 LVGLGFLD 307
+G LD
Sbjct: 655 YGCIGQLD 662
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
+++FG + L+ CK + A++ F+ E + +Y+ L+ G +VG+
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LF +M E C D+ + L+ A C+ G EA EM G EP+ ++Y++
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + +L +M LV +V +N +I CK +E+A +LD M
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C + ++ A+ L+ +M + + P+ TYN ++ L + D A
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ M K GF P T+ + LC K GK+E+A + FE +
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLC-KMGKVEQAHQVFESL 496
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
HEF+ +V +Y+ L L G + E LF +ML ++++ N+++ A CK GN+
Sbjct: 149 HEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVV 208
Query: 98 AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
A + G D+F+Y+ I +C+ +++ ++V + M + + N +Y +I
Sbjct: 209 AKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIH 268
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
C+ K++EA +L +M E G PD +Y ++A C+ + AL+ M + + P
Sbjct: 269 GFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEP 328
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+ +TY +++ +VG+ D E+ +M ++G SV ++ ++ G C K+G +E+A
Sbjct: 329 NVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYC-KRGMMEDAICV 387
Query: 278 FEMMVDEGIPPYSST 292
+ M + P S T
Sbjct: 388 LDSMKLNKVCPNSRT 402
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 158/357 (44%), Gaps = 26/357 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M E + P++ + L+H LCK + V A + K F P +T+ + L +G+
Sbjct: 426 MYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGK 485
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ + E+ + + +L++ CKA +AH + + M G P++ ++++
Sbjct: 486 VEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNV 545
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + ++D M +++ P V TY +I ++ + + A LD+MI G
Sbjct: 546 LLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y A + +C + + A ++ ++ +E ++ D Y++++ +G+ D A
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK-------------------------GKLEEA 274
V M G PS TYS+++ L +K E
Sbjct: 666 GVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEII 725
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
FE MV++G P +T L L + L + L + M+ S + + N++
Sbjct: 726 TMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSL 782
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 142/293 (48%), Gaps = 24/293 (8%)
Query: 25 HVKVAHQFFD--NAKHEFTPTVKTYS----ILVRG-------------LGDVGELSEARK 65
H A FF + +H F TV +Y ILVR + EAR
Sbjct: 82 HPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARF 141
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ + + + + + ++N L + + G IDE + + ++M + G EP+ S++ ++A C
Sbjct: 142 VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHC 201
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ ++ + ++ + FTY +I CK ++ +AY++ + M + G +E
Sbjct: 202 KIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEV 261
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY ++ C+ +++ AL L +M ++ PD TY +++ VG+ A + +E M
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVE 294
+ G P+V TY+V++ C K GK++E + M+++G + P+++ ++
Sbjct: 322 VENGIEPNVYTYTVLIDYFC-KVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 28/329 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +F KP+++ L+ + + A+ F D P V TY+ ++ G
Sbjct: 566 MGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGR 625
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ ++ E +D ++ L+ A G +D A G+L M G EP +YSI
Sbjct: 626 LLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSI 685
Query: 120 FI-HAFCE--------------------AN-----DIHSVFRVLDSMKRYNLVPNVFTYN 153
+ H E AN D + + + M VPNV TY+
Sbjct: 686 LLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYS 745
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I+ LCK E + A++L + M E G +P E +N++L+ C ALRL+ M +
Sbjct: 746 KLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEY 805
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
N + +Y +++ L G ++A E++ S+ G+ + V++ GL +KG ++E
Sbjct: 806 NHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLV-RKGYVDE 864
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ ++M G +S T ML L G
Sbjct: 865 CSQLRDIMEKTGCRLHSDTHTMLSQELNG 893
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
H VL+ + + +V +YN + L + ++E L +M+ G P+ S+N +
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTM 196
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ HC V +A + K D TY ++ ++ A +V+E M + G
Sbjct: 197 VNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +Y+ ++HG C + GK++EA + F M ++G P T +L
Sbjct: 257 LRNEVSYTNLIHGFC-EVGKIDEALELFFQMKEDGCFPDVPTYTVL 301
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + L+H LCK + A + + K F P V TY+I++ G +
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 384
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L +EM + ++ +N ++ A+CK G +DEA G+++EMRS G PD SY+ I+
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 444
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + +++ +V N TYN II L ++ + ++A +L EMI G + D
Sbjct: 445 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 504
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ C V+ +L L+ M ++ + P+ +YN+++ L + R A E+ +
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G P + TY+ +++GLC K G + A E + +E + P T +L
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLC-KMGWMHAALNLLEKLHNENVHPDIITYNIL 616
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 4/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P + LL LC+ + A V ++ ++ G G+L
Sbjct: 255 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL---NVVLFNTVIGGCLAEGKL 311
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EA +L++ M + C D ++ L+ +CK G I A +LREM G P+ +Y+I
Sbjct: 312 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIV 371
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H+FC+ +L+ M L N YN +I LCK+ +++EA L+ EM +G
Sbjct: 372 LHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGC 431
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
NPD SYN I+ + C+ ++ A + + +E V+ + TYN ++ L+R GR+ A
Sbjct: 432 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVR 491
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M G V +Y+ ++ +C K G ++ + E M ++GI P + + +L + L
Sbjct: 492 LAKEMILHGCSLDVVSYNGLIKAMC-KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Query: 58 GELSEARK--LFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G L AR+ L+ M+ R + P A+C+ G DEA +LR M G PDA
Sbjct: 135 GGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDA 194
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
Y IHA C+ + +L+ M +V T++ ++R +C +V EA +L+D
Sbjct: 195 VLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDR 254
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+ +G P +Y +L C + + A ++ R+ + NV+ +N V+ + G+
Sbjct: 255 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGK 310
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
ATE++E+M +G P TYS+++HGLC K G++ A + M +G P T
Sbjct: 311 LAEATELYETMGLKGCQPDAHTYSILMHGLC-KLGRIGSAVRLLREMEKKGFAPNVVTYT 369
Query: 295 MLRNRLVGLGFLDIIEILADKME 317
++ + G D L ++M
Sbjct: 370 IVLHSFCKNGMWDDTRALLEEMS 392
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 6/284 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ + ALC+ A A+H P Y ++ L D G ++EA
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EML C D+ + ++ MC G + EA ++ M + G P +Y +
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C +L + N+V +N +I K+ EA +L + M +G PD
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ ++ C + A+RL+ M K+ P+ TY +VL + G +D + E
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +G + Y+ M++ LC K G+++EA + M +G P
Sbjct: 391 MSAKGLTLNSQGYNGMIYALC-KDGRMDEAMGLIQEMRSQGCNP 433
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 5/250 (2%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+ PT T+ + R L +G EA L M C D + + +++ A+C G +
Sbjct: 152 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EA +L EM +G D ++ + C + R++D M +P V TY ++
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ LC+ + +EA +L + E + +N ++ ++ A L M +
Sbjct: 272 QGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 327
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD HTY++++ L ++GR A + MEK+GF P+V TY++++H C K G ++
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC-KNGMWDDTRA 386
Query: 277 YFEMMVDEGI 286
E M +G+
Sbjct: 387 LLEEMSAKGL 396
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G P I + +++ LC + ++ A F+N E TY+ ++ L G
Sbjct: 426 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 485
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM+ C +D++++N L++AMCK GN+D + +L EM G +P+ SY+I
Sbjct: 486 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 545
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M L P++ TYN +I LCK + A LL+++
Sbjct: 546 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 605
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITR 209
+PD +YN ++++HC ++ A L+ R
Sbjct: 606 VHPDIITYNILISWHCKVRLLDDAAMLLNR 635
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ +++ALCK + A + + P + +Y+ ++ L + ++ EA +F+ +LE
Sbjct: 404 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 463
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ + +N+++ A+ + G +A + +EM G D SY+ I A C+ ++
Sbjct: 464 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 523
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+L+ M + PN +YN +I +LCK +V +A +L +M+ +G PD +YN ++
Sbjct: 524 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 583
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
C ++ AL L+ ++ ENV PD TYN+++ +V D A
Sbjct: 584 GLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 630
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P F++ + A C +L M R+ VP+ Y +I LC V EA L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
L+EM+ G D +++ ++ C V A RL+ RM + MP TY +L+ L R
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
V + D A +M R +V ++ ++ G C +GKL EA + +E M +G P +
Sbjct: 277 VRQADEA----RAMLGRVPELNVVLFNTVIGG-CLAEGKLAEATELYETMGLKGCQPDAH 331
Query: 292 TVEMLRNRLVGLGFLDIIEILADKMER 318
T +L + L LG + L +ME+
Sbjct: 332 TYSILMHGLCKLGRIGSAVRLLREMEK 358
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 146/286 (51%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P Y L+ CK ++ A + FD K E P+ Y+ L+ G DVG+L
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + ++M++R + + +N L+ A+ +A+ +L EM+ G PD F+Y+I I+
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ + V + M + + TY +I + +V+E +L + +++G P
Sbjct: 298 GYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ HC ++ A ++ M K+ + PD TYN +++ +GR D A +
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M KRG P + +Y+ ++ G KG +++A + + M+D+G P
Sbjct: 418 DEMTKRGIQPDLVSYNTLISGY-SMKGDIKDALRVRDEMMDKGFNP 462
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI ++ + L+HAL A+ + K+ F+P V TY+IL+ G G
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A ++F+EM ++ + + SL+ + G + E + G PD Y+
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C D+ + ++ M++ + P+ TYN ++R C +++EA L+DEM +RG
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN +++ + + ++ ALR+ M + P TYN +++ L ++ + D A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAE 484
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M +G P STY ++ GL
Sbjct: 485 NLMKEMVAKGITPDDSTYISLIEGL 509
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHG 100
P TY+ ++ G G + A ++ EM ER D + +L+ CK G +++A
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204
Query: 101 MLREMRSIG-AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ EM + G P A Y+ I +C+ + + + M + + V TYN ++ L
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+ + +AY +L+EM + G +PD ++YN ++ +C AL + M+++ V
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TY ++ + R G+ ++ K+G P V Y+ +++ C G +E A +
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG-GDMERAYEIMA 383
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
M + IPP T L LG LD L D+M +
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTK 422
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 20/288 (6%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L+ ++ P+ + + + LL ++ A A + ++ + +++I +
Sbjct: 71 RLYAQLKSLSVPIPVASLHPLLSSLPSA----PAFALFADIYRLRLPLCTTTFNIMLRHL 126
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPD 183
C +L M R PN TYN +I C +V+ A +++ EM ERG PD
Sbjct: 127 CATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPD 182
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+++Y +++ C + A+++ M TK V P YN ++ VG+ D A +
Sbjct: 183 KYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYR 242
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E M +RG +V+TY++++H L + +A E M G P T +L N
Sbjct: 243 EDMVQRGIAMTVATYNLLMHALF-MDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCK 301
Query: 303 LG----FLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
G L++ E ++ K R+T+ T L RK + +ET+
Sbjct: 302 EGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS-----RKGQVQETD 344
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + L+H L A D + P + TY +V GL G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + K D++ +N++++ +CK ++D+A + EM + G PD F+YS
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T++ +I K K+ EA +L DEMI+R
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TY+ ++K + R +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + A F+ MV G+ P T +L +
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-DCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 300 LVGLGFLDIIEILADKMERST 320
L G L ++ + ++RST
Sbjct: 478 LCKNGKLAKAMVVFEYLQRST 498
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D + + P T++ L+ GL +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+M++R C D++ + +++ +CK G+ID A +L++M E D Y+
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M + P+VFTY+ +I LC + +A +LL +MIER
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E M + +P+V TYS ++ G CK K ++EE + F M G+ + T L
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +YS I
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TY +I + + A + +M+ G +P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + PD +TYN++++ + + G+ + E++
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P+V Y+ M+ G C +KG EEA + M ++G P S T ++R RL
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFC-RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 141/282 (50%), Gaps = 17/282 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--------PTVKTYSILVR 52
M++ I P I+ L++ C H D AKH F P V TYS L++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFC-------MHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G + E +LF EM +R + + + +L+ +A + D A + ++M S+G P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ +Y+I + C+ + V + ++R + P+++TYN +I +CK KVE+ ++L
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ +G +P+ +YN +++ C + A L+ +M ++ +P+ TYN +++ +R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
G + + E+ + M GF ST ++ + L G+L+++
Sbjct: 587 GDREASAELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 626
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D K P++ ++ L+ + + + L ++M D+ ++ + C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EPD + S ++ +C + I ++D M P+ FT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ +I L + K EA L+D+M++RG PD +Y ++ C R ++++AL L+ +M
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + D YN ++ L + D A ++ M+ +G P V TYS ++ LC G+
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC-NYGRW 309
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + V G L E L D+M +RS I ++
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 331 MRG 333
+ G
Sbjct: 370 ING 372
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI + ++LL A+ K ++ + + + + TYSI + +LS A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ DI+ +SLL C + I +A ++ +M +G +PD F+++ IH
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N ++D M + P++ TY ++ LCK ++ A LL +M + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN I+ C ++ AL L T M + + PD TY+ ++ L GR+ A+ + M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
+R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 321 ERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL L D+ ++ +A LF +M++ + I+ N LL A+ K + + +M+++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G D ++YSIFI+ FC + + VL M + P++ T + ++ C ++++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD +++ ++ + + A+ L+ +M + PD TY V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + + MEK V Y+ ++ GLCK K +++A F M ++GI P
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK-HMDDALNLFTEMDNKGIRP 291
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L + L G + D +L+D +ER
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +I + L+ C + D K + P V T+S+L+ G+L EA
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM+ R D + + SL++ CK ++D+A+ M+ M S G +P+ +++I I+
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 510
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M +V + TYN +I+ C+ K+ A +L EM+ R P+
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E AL + ++ K + D YN+++ + + D A +++
Sbjct: 571 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 630
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P V TY++M+ GLC KKG L EA F M ++G P T +L +G
Sbjct: 631 SLPLKGVKPGVKTYNIMIGGLC-KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 689
Query: 304 G 304
G
Sbjct: 690 G 690
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----------------------------HQF 32
MVE+G +P+ +L+ +CK +A H
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 33 FDNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
DNA + F T + TY+IL+ G + G + KL +M++RK +++ +
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+++ K G + EA + +EM G PD +Y+ I FC+ N + +++D M
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PN+ T+N +I CK ++++ +L +M RG D +YN ++ C+ ++N+A
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M V P+ TY ++L L G ++A E++E +EK + Y++++HG+
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
C K+++A F + +G+ P T ++ L G L E+L KME
Sbjct: 617 CNAS-KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + ++ L++ LC A D ++ P TY ++ + G+
Sbjct: 282 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 341
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M ER +D + ++ +++ +CK G++D A + EM G + +Y+I
Sbjct: 342 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 401
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A ++L M + + PNV T++ +I K K+ EA +L EMI RG
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 461
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +++ C ++ A +++ M + P+ T+N+++ + R D
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ G C+ GKL A + F+ MV +PP T ++L +
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCEL-GKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Query: 300 LVGLG 304
L G
Sbjct: 581 LCDNG 585
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++Y L +++ C+ + + +A K + P T+S L+ GL G +SEA
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+E D++ N+L+ +C +G EA ++ +M G +P+A +Y ++
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 335
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ +L M+ N+ + Y+ II LCK+ ++ A+ L +EM +G +
Sbjct: 336 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 395
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C+ + +L+ M K + P+ T+++++ V+ G+ A E+ +
Sbjct: 396 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 455
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TY+ ++ G CK+ L++A + ++MV +G P T +L N
Sbjct: 456 EMIHRGIAPDTITYTSLIDGFCKEN-HLDKANQMVDLMVSKGCDPNIRTFNILIN 509
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L++ LC V A + D + P + T + LV GL G+
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA L D+M+E C + + + +L MCK+G A +LR+M + DA YSI
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + F + + M+ + N+ TYN +I C + ++ +LL +MI+R
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++ ++ ++ A L M + PD TY ++ + D+A
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M +G P++ T++++++G CK ++++ + F M G+ + T L
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKAN-RIDDGLELFRKMSLRGVVADTVTYNTLIQG 545
Query: 300 LVGLGFLDIIEILADKM 316
LG L++ + L +M
Sbjct: 546 FCELGKLNVAKELFQEM 562
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 129/270 (47%), Gaps = 1/270 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CK H+ A+Q D P ++T++IL+ G
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +N+L++ C+ G ++ A + +EM S P+ +Y I
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + ++ YN II +C KV++A+ L + +G
Sbjct: 577 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 636
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C + ++ A L +M ++ PD TYN++++ + G ++
Sbjct: 637 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 696
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
++ E +++ GF ST +++ L K
Sbjct: 697 KLIEELKRCGFSVDASTIKMVIDMLSDDKA 726
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P+I + L++ CK + + F + TY+ L++G ++G+
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A++LF EM+ RK P +I+ + LL+ +C G ++A + ++ E D Y+I
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C A+ + + + S+ + P V TYN +I LCK + EA L +M E G
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV--RVGRF-- 235
PD W+YN ++ H + +++LI + + D T MV+ +L + F
Sbjct: 672 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANYFSK 731
Query: 236 ----DRATEVWESMEK 247
++T W EK
Sbjct: 732 YHNCSKSTSFWNQPEK 747
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV +S L + + L +M + ++ + ++ C+ + A
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ ++ +G EP+ ++S I+ C + ++D M P++ T N ++ LC
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D+M+E G P+ +Y +L C + +A+ L+ +M + N+ D
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y++++ L + G D A ++ ME +G ++ TY++++ G C G+ ++ K M
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC-NAGRWDDGAKLLRDM 422
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFL 306
+ I P T +L + V G L
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKL 447
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L GL D+ + +A LF +M+ + ++ + L A+ K D + ++M G
Sbjct: 158 LRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 216
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ ++ SI I+ FC + F + + + PN T++ +I LC +V EA
Sbjct: 217 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 276
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L+D M+E G PD + N ++ C + A+ LI +M + P+ TY VL ++
Sbjct: 277 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 336
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ G+ A E+ ME+R YS+++ GLC K G L+ A F M +GI
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC-KHGSLDNAFNLFNEMEMKGITTN 395
Query: 290 SSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T +L G + D ++L D ++R
Sbjct: 396 IITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 7/328 (2%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE----FTPTVKTYSILVRGLGDVGELSEARKLFD 68
L+ + ALCK H + A + +HE P +TY++L+ G L + KL+
Sbjct: 153 LNMTVGALCKEGHPRPAAKLIQRCRHEEGTLPAPDERTYNMLLDGWSSARRLEKVEKLWA 212
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
EM ++++ +L++A+C + D+A +L EMR G E + + + +++ A
Sbjct: 213 EMRLAGVRSTVVSYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAG 272
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+++L+ Y + PN+ T+N ++ CK + A +L MI RG P +YN
Sbjct: 273 RFQDAYKLLEKFPLYGVAPNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYN 332
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+ V + + L +M PD+ TYN+++K+L R + ++ + M+
Sbjct: 333 YFFVFFAKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTS 392
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
GF ++T ++++H LC+ + EEAC FE M G+ P T ML + LG +++
Sbjct: 393 GFESDLATSTMLIHLLCRSH-QFEEACVEFEDMFRRGLVPQYITYRMLMKEIKRLGLVEL 451
Query: 309 IEILADKMERSTSCTIQELANAMRGKTG 336
+E L + M T +L + R K G
Sbjct: 452 VEKLTNLMRSVPHST--KLPGSYREKEG 477
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++ ++ L+ ALC +H +A
Sbjct: 218 GVRSTVVSYGTLIKALCMMQHP----------------------------------DKAA 243
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM E+ ++L N ++ ++ AG +A+ +L + G P+ +++ + +
Sbjct: 244 SLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYKLLEKFPLYGVAPNISTFNSLVLGY 303
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ VL +M ++P TYN K VE L ++M+ G PD+
Sbjct: 304 CKYGDLAGASSVLKAMIGRGILPTAKTYNYFFVFFAKTCNVELGMNLYNKMVNNGYAPDQ 363
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ C+ + + +++I M D T M++ LL R +F+ A +E
Sbjct: 364 ITYNLLIKMLCEANRLELVVQMIKEMKTSGFESDLATSTMLIHLLCRSHQFEEACVEFED 423
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
M +RG P TY +++ + K+ G +E K +M
Sbjct: 424 MFRRGLVPQYITYRMLMKEI-KRLGLVELVEKLTNLM 459
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 152/293 (51%), Gaps = 8/293 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P+++ +L LC ++ +++ H D+ P V +YS + GL
Sbjct: 152 MTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL-PNVVSYSTVTDGLLK 210
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R+ +++ ++S++ A+CK +D+A + M G P+ F+
Sbjct: 211 GGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFT 270
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H FC + + + L+ M + PNV TY+ + LCKN + EA ++ M+
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMV 330
Query: 177 ERGANPDEWSYNAIL-AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+RG PD +Y+++L Y + A V M L M + ++ PD + +N ++ + G+
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMH-GLFDLMVQSDMQPDHYVFNTLIYASAKQGKV 389
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
D A V+ M +G P+ TY+ +++G CK ++E A F+ MV G+ P
Sbjct: 390 DEAMLVFSKMRHQGLKPNCVTYNTLINGYCKIT-RMENALALFQEMVSNGVSP 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 42/325 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDVGELS 61
GI I L+ L + + +F A+ TPTV TY IL+ G L
Sbjct: 48 GIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLD 107
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ V+ + N LL+ +C D+A + LR M +G P+ FS++I
Sbjct: 108 LGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTII 167
Query: 121 IHAFCEANDIHSVFRVL----------------------------DSMKRY--------- 143
+ C N +L D K Y
Sbjct: 168 LKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDR 227
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
++PNV TY+ II LCK + +++A ++ D M++ G P+ ++Y +++ C ++ A
Sbjct: 228 RILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEA 287
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++ + +M V P+ TY+ + L + GR A +++ SM KRG P ++TYS ++HG
Sbjct: 288 IKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHG 347
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
+G L E F++MV + P
Sbjct: 348 Y-AIEGALVEMHGLFDLMVQSDMQP 371
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P++ ++ ALCK + + A + D K+ TP TY+ LV G G+
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA K ++M +++ ++S ++ +CK G EA + M G +PD +YS
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + + D M + ++ P+ + +N +I K KV+EA + +M +G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQG 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ +C + AL L M V P+ TYN++L+ L R GR A
Sbjct: 404 LKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAK 463
Query: 240 EVWESMEKRG 249
E + + K G
Sbjct: 464 EFYVQIIKSG 473
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P V TY +I C +++ + L ++++G + +N +L C + A+
Sbjct: 86 VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145
Query: 205 RLITR-MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM--EKRGFYPSVSTYSVMV 261
++ R MT+ +P+ ++ ++LK L R A E+ M + G P+V +YS +
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVT 205
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
GL K G ++A + M+D I P YSS + L
Sbjct: 206 DGLL-KGGDPDKAYATYREMLDRRILPNVVTYSSIIAAL 243
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN---VMPDRHTY 222
E+A + DE++ RG S N LA R A+ RM + V P HTY
Sbjct: 35 EDALDVFDELLRRGIGAPIRSLNGALA-DVARDNPAAAVSRFNRMARAGASMVTPTVHTY 93
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ GR D + K+GF ++ ++ GLC K
Sbjct: 94 GILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADK 139
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 141/259 (54%), Gaps = 2/259 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y +VRGL G +AR LFDEML R D+ N++L A+C+ G+I E+ +L ++
Sbjct: 82 AYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKV 141
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G + F+ +I+I CE + +++SM Y + P+V TYN ++R LCK+ KV
Sbjct: 142 LKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKV 200
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+EA Q L M+ +G PD+++YN I+ +C R + A L+ + +PDR TY +
Sbjct: 201 QEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSL 260
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L G +RA E++ + + P + Y+ +V GLC ++G + A + MV++G
Sbjct: 261 INGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC-RQGLILHALQVMNEMVEDG 319
Query: 286 IPPYSSTVEMLRNRLVGLG 304
P T ++ N L +G
Sbjct: 320 CHPDIWTYNIVINGLCKMG 338
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 155/293 (52%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P L++ LC V+ A + F+ A+ + P + Y+ LV+GL G + A
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM+E C DI +N ++ +CK GNI +A ++ + G PD F+++ I
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + S ++++ M Y + P+ TYN ++ LCK K +E + +EMI +G P+
Sbjct: 369 YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 428
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C ++ A +I RM+++ ++PD ++N ++ R G D A +++
Sbjct: 429 AITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQ 488
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++++G+ + T+++++ G K ++ A K F M+ +G P T +L
Sbjct: 489 KLDEKGYSATADTFNILI-GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVL 540
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 146/305 (47%), Gaps = 3/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ + P + + +LHALC++ + + K + T +I +RGL + G
Sbjct: 106 MLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGR 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L + M P D++ +N+L+ +CK + EA LR M + G PD F+Y+
Sbjct: 166 LEEAVALVESMDAYIAP-DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNT 224
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + + +L VP+ TY +I LC VE A +L +E +
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN+++ C + + AL+++ M ++ PD TYN+V+ L ++G A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V +G+ P V T++ M+ G CK+ KL+ A + E M GI P + T + N
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRL-KLDSALQLVERMWMYGIAPDAITYNSVLNG 403
Query: 300 LVGLG 304
L G
Sbjct: 404 LCKAG 408
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 163/364 (44%), Gaps = 36/364 (9%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ + + + + LC+ ++ A ++ P V TY+ L+RGL ++ EA
Sbjct: 145 GMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAA 204
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ M+ + C D +N++++ CK + EA +L++ G PD +Y I+
Sbjct: 205 QYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGL 264
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C D+ + + + +L P++ YN +++ LC+ + A Q+++EM+E G +PD
Sbjct: 265 CAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDI 324
Query: 185 WSYNAIL----------------------AY-------------HCDRAEVNMALRLITR 209
W+YN ++ Y +C R +++ AL+L+ R
Sbjct: 325 WTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVER 384
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + PD TYN VL L + G+ E +E M +G P+ TY++++ CK
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN- 443
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELAN 329
+LEEA M +G+ P + + L + G LD +L K++ + N
Sbjct: 444 QLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 503
Query: 330 AMRG 333
+ G
Sbjct: 504 ILIG 507
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE G P I+ + +++ LCK ++ A ++A + P V T++ ++ G +
Sbjct: 315 MVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLK 374
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L + M D + +NS+L +CKAG E + EM G P+A +Y+I
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 434
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N + V+ M + LVP+ ++N +I C+N ++ AY L ++ E+G
Sbjct: 435 LIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKG 494
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + + + MA ++ M + PD +TY +++ + DRA
Sbjct: 495 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY 554
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +GF PS++T+ +++ L ++ EA +MV G+ P
Sbjct: 555 VHLAEMVSKGFVPSMATFGRVLNSLAMNH-RVSEAVAIIHIMVRMGVVP 602
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + ++ CKR + A Q + + P TY+ ++ GL G+ E
Sbjct: 354 GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F+EM+ + C + + +N L+E CK ++EA G++ M G PD S++ IH
Sbjct: 414 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHG 473
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC D+ + + + T+N +I ++ A ++ EMI +G PD
Sbjct: 474 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y ++ C A V+ A + M + +P T+ VL L R A +
Sbjct: 534 LYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIH 593
Query: 244 SMEKRGFYPSV 254
M + G P V
Sbjct: 594 IMVRMGVVPEV 604
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
CP A+N++++A+ D+AH + M S G PDA ++++ I +FC H
Sbjct: 6 CPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVAL 65
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R+L S+ Y ++R L + +A L DEM+ R PD ++N +L
Sbjct: 66 RLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHAL 125
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + ++ + L+ ++ K + ++ T N+ ++ L GR + A + ESM+ P V
Sbjct: 126 CQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDV 184
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY+ ++ GLCK K++EA +Y M+++G P
Sbjct: 185 VTYNTLMRGLCKDS-KVQEAAQYLRRMMNQGCIP 217
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + P YN I+ L ++A+++ M+ G PD ++ + C
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
++ALRL+ + + Y V++ L G A +++ M +R +P V+T++
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
++H LC +KG + E+ ++ G+ T + L G L+ L + M+
Sbjct: 121 VLHALC-QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY 179
Query: 320 TSCTIQELANAMRG 333
+ + MRG
Sbjct: 180 IAPDVVTYNTLMRG 193
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 2/277 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E I P ++ L+H LCK + VA Q FD + P T++ L+ G
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRR 343
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + +ML D++ +N+LL +CK G++++A ++ EM+ +G +PD +Y+
Sbjct: 344 MDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTT 403
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ D+ S + M +V + + +I C++ +V +A + L EM+E G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ +C + V M +L+ M P TYN+++ L + G+ A
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ E+M G P TY++++ G C K GK E+ K
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHC-KNGKAEDLLK 559
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G++P+ + L++ LCK +++ + + + P V TYS+L+ GL G L A
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDEM +R + + +L++ ++ +D A +M ++G +PD Y+ ++
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D++ +++D MK + P+ TY +I CK +E A ++ M E G D
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ A+++ C V A R + M + + PD TY MV+ + G ++ +
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+ G P V TY+V+++GLC K+G+++ A E M++ G+ P T +L
Sbjct: 493 EMQINGHKPGVITYNVLMNGLC-KQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 143/286 (50%), Gaps = 4/286 (1%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
Y LD+++++ V + + + ++ F P V+ Y+IL+ G + +A+ +F+E+
Sbjct: 193 YLLDKMINS---NSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI 249
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+R ++ N+L+ +CK+ N+DE + + M PD F+YS+ IH C+ +
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
++ D M++ L PN T+ +I ++ +++ A +M+ G PD YN +
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTL 369
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
L C +VN A +L+ M + PD+ TY ++ + G + A E+ + M + G
Sbjct: 370 LNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ++ G C + G++ +A + MV+ G+ P +T M+
Sbjct: 430 VLDNVAFTALISGFC-RDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
++E+G P + + L++ CK ++ A F+ K PT +++ L+ GL
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M E + D+ ++ L+ +CK G +D A + EM+ G P+ +++
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + S M + P++ YN ++ LCK V +A +L+DEM G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ +C ++ A+ + M +E V+ D + ++ R GR A
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
M + G P +TY++++ G C KKG ++ K + M G P T +L N
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYC-KKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 300 LVGLGFLDIIEILADKM 316
L G + +L + M
Sbjct: 513 LCKQGQMKNANMLLEAM 529
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+KP + + LL+ LCK V A + D K P TY+ L+ G G+
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGD 413
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ M E +D +A +L+ C+ G + +A LREM G +PD +Y++
Sbjct: 414 LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTM 473
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ ++ F++L M+ P V TYN ++ LCK +++ A LL+ M+ G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRL 206
PD+ +YN +L HC + L+L
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
++L+ A +G + +A R +R+ + + +N +++ +
Sbjct: 157 DALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILE 216
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
Y P V YN +I K CK + +A + +E+ +RG P S+N ++ C ++
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
RL M + + PD TY++++ L + GR D A ++++ M++RG P+ T++ ++
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
G + + +++ A + M+ G+ P L N L +G ++ L D+M+
Sbjct: 337 GQYRSR-RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 89/256 (34%), Gaps = 60/256 (23%)
Query: 87 EAMCKAGNIDEAHGMLREMRSI------------------------GAEPDAFSYSIFIH 122
++ C N AH M +E +SI G F + +
Sbjct: 102 QSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMI 161
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A+ ++ + + ++ N ++ K+ + + E++E G P
Sbjct: 162 AYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPP 221
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YN ++ C + A + + K + P ++N ++ L + D +
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++ME+ YP V TYSV++HGLCK+
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKE----------------------------------- 306
Query: 303 LGFLDIIEILADKMER 318
G LD+ E L D+M++
Sbjct: 307 -GRLDVAEQLFDEMQQ 321
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 157/298 (52%), Gaps = 5/298 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD-VGELSE 62
F I + LL ALC+ K+V+ A Q K F K+++I++ G + +G E
Sbjct: 156 FKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRE 215
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ +++ EM +R D++++ S++ KAG++ + ++M+ IG EPD Y+ IH
Sbjct: 216 SERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIH 275
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A + ++ F ++ +M+ + PN+ TYN +I+ LC+ KVEEA D+M++R +P
Sbjct: 276 ALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISP 335
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y+A L EV L+ +M K P TY M+++ R + + ++W
Sbjct: 336 TIRTYHAFLRILRTGEEV---FALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLW 392
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M + G P S+Y V++HGL G+L+ A KY+ M ++ + P EML+ L
Sbjct: 393 DEMSENGISPDRSSYIVLIHGLF-LNGELDAAHKYYTEMKEKQLLPEPKIDEMLQTWL 449
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS---IFIHAFCEANDIHSVFRVLD 138
++S++ + K D A ++ EMR + + I I +C +D+
Sbjct: 92 YHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFY 151
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-------------------------- 172
+ KR+ + + ++ LC+ + V++A QL+
Sbjct: 152 AYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIG 211
Query: 173 ---------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
EM +RG D SY ++++ + + LRL +M K + PDR YN
Sbjct: 212 SPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYN 271
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
V+ L + + A + ++ME++G P++ TY+ ++ LC+ + K+EEA F+ M+
Sbjct: 272 AVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRAR-KVEEAKGAFDDMLK 330
Query: 284 EGIPP----YSSTVEMLR 297
I P Y + + +LR
Sbjct: 331 RCISPTIRTYHAFLRILR 348
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P+I + L+ LC+ + V+ A FD+ K +PT++TY +R L
Sbjct: 293 MEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRIL----- 347
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ G +E +L +MR +G +P +Y +
Sbjct: 348 -------------------------------RTG--EEVFALLEKMRKMGCQPINDTYIM 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + +VF++ D M + P+ +Y +I L N +++ A++ EM E+
Sbjct: 375 LIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQ 434
Query: 180 ANPD 183
P+
Sbjct: 435 LLPE 438
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 3/282 (1%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
K HV A Q + + F +++ Y+ L+ G G+L EA+ + M +D++A
Sbjct: 167 KAGHVVTAEQLVEEPQTRFPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVA 226
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
N+LL G ++A + +M G P+A SY+ I + RV M+
Sbjct: 227 FNTLLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMR 286
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P+ TY ++ CK K+ + Y+ LD + G D Y+ H + ++
Sbjct: 287 RKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLE 346
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L L+ RM + PD YN+V++L R+G +A +W ME G P V T+++MV
Sbjct: 347 ECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMV 406
Query: 262 HGLCKKKGKLEEACKYFEMMVDEG--IPPYSSTVEMLRNRLV 301
+GL +G L EAC YF+ MV G + P ++ L N LV
Sbjct: 407 NGLV-GQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLLNALV 447
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 39/326 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ LL+ C++ + A K + V ++ L+ G G +A +L
Sbjct: 188 SLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNTLLAGFVADGRFEDAFELT 247
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+M +R CP + +++ +L++ + G +DEA + EMR G PDA +Y + FC+A
Sbjct: 248 GQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKA 307
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
I + LD++ R L + Y+ K E++EE +L++ M E PD Y
Sbjct: 308 GKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIY 367
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM----------------------- 224
N ++ C E A+ L M + P T+ +
Sbjct: 368 NVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLVEACSYFKDMVG 427
Query: 225 --------------VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+L LVR + + A +VWE + +G +VS +++ +H L KK
Sbjct: 428 RGLFVAPQYGVLKDLLNALVRDEKLELAKDVWECIASKGCELNVSAWTIWIHALYAKK-H 486
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
++EAC Y M++ G+ P T L
Sbjct: 487 VKEACLYCLDMLEAGVMPQPDTFAKL 512
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 155/353 (43%), Gaps = 37/353 (10%)
Query: 6 IKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P+ L L+ LCK K + + F P + T + L+ GL G + E
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
KL +MLER D + +N+L+ CK G + E + EM G +PD +++++ +H
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A+ I R+ K+ VPNV+TY +I CK KVEE LL+E++ + +
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
YN+++ +C +N A RL M V+ TY+ ++ L +G D A + +
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701
Query: 245 MEKRGFYPSVS-----------------------------------TYSVMVHGLCKKKG 269
M K G P+V TY++M+ G CK G
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKL-G 760
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
K +EA K M ++GI P + T N L G ++ + D+M C
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVC 813
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 145/283 (51%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P ++ +++A CK A F K P V TY+ ++ GL G L EA
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEA 310
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++M++ K ++ ++ + + K IDEA+ +L+EM +G P+ Y+ I
Sbjct: 311 YRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDG 370
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ +I ++ D M + PN T N +I+ CK++++ +A +L+EMI RG +
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ S++ ++ + C + AL I M N+ P+ ++ L + G+ A E+W
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWC 490
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ +GF P++ T + ++HGLC K G ++E K M++ G+
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLC-KAGNMQETLKLLRDMLERGL 532
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ GI+P IY + LLH LC + A + + K + + P V TY +++ G +
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E L +E++ +K ++ + +NSL+ A C GN++ A + +M+S G +YS
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C + +LD M++ L+PNV Y II K ++ + +L EM
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++++Y ++ C + A +L+ MT++ ++PD TYN L + G+ + A
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAF 801
Query: 240 EVWESMEKRGFYPSVSTYSVMVHG 263
+V + M TY+ ++ G
Sbjct: 802 KVCDEMSSGAVCLDEITYTTLIDG 825
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 151/301 (50%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + ++H LCK + A++F + K + +P++ TYS+ + GL + +
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + EM E + + +N+L++ CK GNI EA + +M S G P++ + +
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+++ I VL+ M L N +++ +I LC + A + EM+ R
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ +++ C + A+ L R+ + +P+ T N ++ L + G
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M +RG TY+ ++ G C K+GK++E + E MV +GI P T +L +
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCC-KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580
Query: 300 L 300
L
Sbjct: 581 L 581
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I + L+H LCK +++ + D + TY+ L+ G G++ E
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM+++ DI N LL +C A IDEA + E + G P+ ++Y + I
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615
Query: 124 FCEAN-----------------------------------DIHSVFRVLDSMKRYNLVPN 148
+C+AN ++++ FR+ D MK ++ +
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS 675
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TY+ ++ LC V++A LLDEM + G P+ Y I+ + ++N ++
Sbjct: 676 CATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQ 735
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M+ N+ P++ TY +++ ++G+ A ++ M ++G P TY+ +GLC K+
Sbjct: 736 EMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLC-KE 794
Query: 269 GKLEEACKYFEMM 281
GK+EEA K + M
Sbjct: 795 GKVEEAFKVCDEM 807
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 15/262 (5%)
Query: 44 VKTYSILVRGLG-----DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
V YS + LG DV L + LF + + C LL ++ KA + ++
Sbjct: 190 VHVYSTQFKHLGFGFAADVFSLLAKKGLFPSL--KTCTF-------LLSSLVKANELKKS 240
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ + + G PD +S I+AFC+ + + M++ + PNV TYN II
Sbjct: 241 YEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHG 300
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LCK+ +++EAY+ ++M++ +P +Y+ + +++ A ++ M++ +P+
Sbjct: 301 LCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPN 360
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
YN ++ ++G A ++ + M +G P+ T + ++ G CK ++ +A
Sbjct: 361 EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSD-QIGQAENVL 419
Query: 279 EMMVDEGIPPYSSTVEMLRNRL 300
E M+ G+P + M+ N L
Sbjct: 420 EEMIGRGLPINQGSFSMVINWL 441
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 135/323 (41%), Gaps = 38/323 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKL 66
S + D AL + K A FF +F T ++Y +L+ L LS AR L
Sbjct: 83 SPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLL 142
Query: 67 FDEMLERKCPV---------------------------------DILAHNSLLEAMCKAG 93
+++ K P D+L H + K
Sbjct: 143 LIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVH--VYSTQFKHL 200
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
A + + G P + + + + +AN++ + V D + ++P+V ++
Sbjct: 201 GFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFS 260
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I CK + ++A L +M + G P+ +YN I+ C ++ A R +M KE
Sbjct: 261 TMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE 320
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V P TY++ + L+++ + D A V + M + GF P+ Y+ ++ G C K G + E
Sbjct: 321 KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC-KMGNISE 379
Query: 274 ACKYFEMMVDEGIPPYSSTVEML 296
A K + M+ +GI P S T+ L
Sbjct: 380 ALKIRDDMLSKGISPNSVTLNSL 402
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 34/139 (24%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A + + + K+ + P T +L LV+ ++ EV++ + G P V +S M++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 263 GLCK----------------------------------KKGKLEEACKYFEMMVDEGIPP 288
CK K G+L+EA ++ E MV E + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 289 YSSTVEMLRNRLVGLGFLD 307
T + N L+ L +D
Sbjct: 325 SLITYSVFINGLIKLEKID 343
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 155/304 (50%), Gaps = 4/304 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKH---EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
LL +LCK HV+VA ++F+ + F P+++ Y+IL+ G +L A++L+ EM +
Sbjct: 236 LLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKK 295
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
K ++ + +L+E C+ +++ A ++ EMR G EP+A Y+ + A EA
Sbjct: 296 NKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKE 355
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+++ P + TYN +++ CK + A ++L MI RG P +YN
Sbjct: 356 ALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFR 415
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ ++ ++ L +M + PD+ TY+++LK+L R + A +V M+ RGF
Sbjct: 416 FFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDM 475
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
++T ++++H LCK K EEA FE M+ GI P T L + + G + L
Sbjct: 476 DLATSTMLMHLLCKMH-KFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKL 534
Query: 313 ADKM 316
+ M
Sbjct: 535 QEMM 538
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 49/299 (16%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGDVGEL 60
G +PS ++L++ L K + A + + F +V+ + IL+R G +
Sbjct: 149 GFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMV 208
Query: 61 SEARKLFDEMLERKCPVDILAHNS-------LLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
A + + E C ++ ++ LL+++CK G++ A R +G+
Sbjct: 209 QPAIRTY----EFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGS--- 261
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+ P++ YN +I ++ K++ A +L
Sbjct: 262 ------------------------------SFEPSIRAYNILINGWFRSRKLKHAQRLWF 291
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
EM + +P +Y ++ +C V +A+ L+ M +E + P+ YN ++ L G
Sbjct: 292 EMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAG 351
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
RF A + E P++STY+ +V G CK G L A K +MM+ G P +T
Sbjct: 352 RFKEALGMMERFMVLEQGPTISTYNSLVKGYCKA-GDLSGASKILKMMIGRGFTPTPTT 409
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P+ + ++ AL + K A + E PT+ TY+ LV+G G+LS A
Sbjct: 332 GIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGA 391
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ M+ R +N K G I+E+ + +M G PD +Y + +
Sbjct: 392 SKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKM 451
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
CE ++ +V + MK ++ T ++ LCK K EEA+ + MI RG P
Sbjct: 452 LCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQ 511
Query: 184 EWSYNAILAYHCDRAEVNMALRL---ITRMTKENVMPDRHTYN 223
++ + R MA +L ++ + +PD TYN
Sbjct: 512 YLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPD--TYN 552
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 4/291 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P++ ++ LCK K V A+ + E P V TY+ L+ G+L A
Sbjct: 147 RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFS 206
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L EM+ + D+ + L++A+CK G A + M +G P+ +SY+I I+ C
Sbjct: 207 LLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLC 264
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + +L M N+VP+ TYN +I LCK+ ++ A L++EM RG D
Sbjct: 265 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 324
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++L C ++ A L +M + + P +TY ++ L + GR A E+++ +
Sbjct: 325 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 384
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+G V TY+VM+ GLCK+ G +EA M D G P + T E++
Sbjct: 385 LVKGCCIDVWTYTVMISGLCKE-GMFDEALAIKSKMEDNGCIPNAVTFEII 434
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 3/251 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P +Y L+ ALCK K A Q F + P V +Y+I++ GL
Sbjct: 211 MILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L EML + D + +NSL++ +CK+G I A ++ EM G D +Y+
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ ++ + MK + P ++TY +I LCK +++ A +L ++ +G
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D W+Y +++ C + AL + ++M +P+ T+ ++++ L D+A
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448
Query: 240 EVWESMEKRGF 250
++ M +G
Sbjct: 449 KLLHEMIAKGL 459
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P++ + L+ A C + A + P V T+SIL+ L G+ A+
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAK 238
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F M++ ++ ++N ++ +CK +DEA +LREM PD +Y+ I
Sbjct: 239 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C++ I S +++ M +V TY ++ LCKN+ +++A L +M ERG P
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y A++ C + A L + + D TY +++ L + G FD A +
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 418
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
ME G P+ T+ +++ L +K ++A K M+ +G+ +
Sbjct: 419 MEDNGCIPNAVTFEIIIRSLFEKDEN-DKAEKLLHEMIAKGLLGF 462
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 35/336 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ ++ L L++ C + + K + P T++ L++GL GE+ +
Sbjct: 40 GIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKL 99
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + + +++ +LL +CK G A +LR + P+ YS I
Sbjct: 100 LHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDG 159
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI------- 176
C+ ++ + + M + PNV TYN +I C ++ A+ LL EMI
Sbjct: 160 LCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPD 219
Query: 177 --------------------------ERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+ G NP+ +SYN ++ C V+ A+ L+ M
Sbjct: 220 VYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 279
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+N++PD TYN ++ L + GR A + M RG V TY+ ++ LCK +
Sbjct: 280 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQ-N 338
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
L++A F M + GI P T L + L G L
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 374
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++Y + +++ LCK K V A H+ P TY+ L+ GL G
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A L +EM R P D++ + SLL+A+CK N+D+A + +M+ G +P ++Y+
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + + + +V+TY +I LCK +EA + +M + G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
P+ ++ I+ ++ E + A +L+ M + ++ R+
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLGFRN 464
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
I+ N +L ++ K + ++M G E + + SI I+ FC + F +L
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+ + PN T+ +++ LC +V++ D+++ + ++ SY +L C
Sbjct: 70 KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
E A++L+ + + P+ Y+ ++ L + + A +++ M+ R +P+V TY+
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ C G+L A M+ + I P T +L + L
Sbjct: 190 TLICAFC-LAGQLMGAFSLLHEMILKNINPDVYTFSILIDAL 230
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 151/287 (52%), Gaps = 13/287 (4%)
Query: 8 PSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
P ++ + LL+ LC ++ +++ H D+ + P V +YS ++ G G+L
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGG-DCPPDVVSYSTVINGFFKEGDL--- 104
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+ML+++ +++ +NS++ A+CKA +D+A +L M G PD +Y+ +H
Sbjct: 105 ----DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + L M+ + P+V TYN ++ LCKN + EA ++ D M +RG PD
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L + + + L+ M + + P+ + +++++ + + + A V+
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P S
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLC-KSGRVEDAMLYFEQMIDEGLRPDS 326
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFSYSI 119
+AR +FDE+L R P D+ ++N LL +C EA +L M G + PD SYS
Sbjct: 35 DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + D LD M + PNV TYN II LCK + V++A ++L M++ G
Sbjct: 94 VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+I+ C + A+ + +M + V PD TYN ++ L + GR A
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++SM KRG P ++TY ++ G KG L E ++MV GI P
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYA-TKGALVEMHGLLDLMVRNGIHP 254
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P++ + ++ ALCK + V A + K P TY+ +V G G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA + M G +PD +Y
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ ++ K EKVEEA + +M ++G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +Y ++ C V A+ +M E + PD YN ++ L ++++A
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M RG S ++ ++ C K+G++ E+ K F++MV G+ P
Sbjct: 347 ELFLEMLDRGICLSTIFFNSIIDSHC-KEGRVIESGKLFDLMVRIGVKP 394
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL------------------------ 171
V D + R +P+VF+YN ++ LC + +EA +L
Sbjct: 39 VFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 172 ------LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
LD+M+++ +P+ +YN+I+A C V+ A+ ++T M K VMPD TYN +
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G+ A + M G P V TY+ ++ LC K G+ EA K F+ M G
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC-KNGRCTEARKIFDSMTKRG 216
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ P +T L G L + L D M R+
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P+ ++ LCK V+ A +F+ E P Y+ L+ L +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF EML+R + + NS++++ CK G + E+ + M IG +PD I
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDI----I 397
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ EA D+ F LVPN +TY + + +EE QL M + G
Sbjct: 398 TLGRNDEAKDLFVAF------SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
D N I+ R E+ A ++ + +++ + T ++ + LL
Sbjct: 452 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 501
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P +Y + +++ LCK K+ + F + + +P TY L+ G++ E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F +M R D++ +S++ ++GN+D+A ++ G PD Y+I I
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C I + + M + +V TYN I+ LCK + + EA +L +EM ER PD
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ ++ HC + A+ L +M ++ + D TYN +L +VG D A E+W
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + P+ +YS++V+ LC KG L EA + ++ M+ + I P
Sbjct: 540 DMVSKEILPTPISYSILVNALC-SKGHLAEAFRVWDEMISKNIKP 583
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G + + +LH LCKRK + A + F+ + P T +IL+ G +G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF +M E++ +D++ +N+LL+ K G+ID A + +M S P SYSI
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A C + FRV D M N+ P V N +I+ C++ + L++MI G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE--NVMPDRHTYNMVLKLLVRVGRFDR 237
PD SYN ++ ++ A L+ +M +E ++PD TYN +L R +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V M +RG P STY+ M++G + L EA + + M+ G P
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQD-NLTEAFRIHDEMLQRGFSP 725
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 162/349 (46%), Gaps = 39/349 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G S++DL L+ + + ++ AH+ F + + FT ++ + L+ L +G + A
Sbjct: 162 GSNDSVFDL--LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ E+ +++ N ++ A+CK G +++ L +++ G PD +Y+ I A
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F ++++M P V+TYN +I LCK+ K E A ++ EM+ G +PD
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++L C + +V ++ + M +V+PD ++ ++ L R G D+A +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 244 SMEKRGFYP-----------------------------------SVSTYSVMVHGLCKKK 268
S+++ G P V TY+ ++HGLCK+K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
L EA K F M + + P S T+ +L + LG L L KM+
Sbjct: 460 -MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E I+ + + LL K + A + + D E PT +YSILV L G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +++DEM+ + ++ NS+++ C++GN + L +M S G PD SY+
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 120 FIHAFCEANDIHSVFRVLDSMK--RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ F ++ F ++ M+ + LVP+VFTYN I+ C+ +++EA +L +MIE
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
RG NPD +Y ++ + + A R+ M + PD
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 149/334 (44%), Gaps = 39/334 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + ++ + ++ A +F++ K P Y+IL++G G +S A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EML++ C +D++ +N++L +CK + EA + EM PD+++ +I I
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 125 CEANDIHSVFRVLDSMKR---------YN--------------------------LVPNV 149
C+ ++ + + MK YN ++P
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
+Y+ ++ LC + EA+++ DEMI + P N+++ +C + + +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM--EKRGFYPSVSTYSVMVHGLCKK 267
M E +PD +YN ++ VR +A + + M E+ G P V TY+ ++HG C++
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+++EA M++ G+ P ST + N V
Sbjct: 671 N-QMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 158/335 (47%), Gaps = 6/335 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ ++Y L+ +++ALCK ++ F + + P + TY+ L+ G + EA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + M + + +N+++ +CK G + A + EM G PD+ +Y +
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ +V M+ ++VP++ ++ ++ ++ +++A + + E G PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ +C + +++A+ L M ++ D TYN +L L + A +++
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +R +P T ++++ G C K G L+ A + F+ M ++ I T L + +
Sbjct: 470 EMTERALFPDSYTLTILIDGHC-KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 304 GFLDII-EILADKMER---STSCTIQELANAMRGK 334
G +D EI AD + + T + L NA+ K
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 22/273 (8%)
Query: 33 FDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER-----------------KC 75
F N KH ILVR G LS+A+ M+ R C
Sbjct: 106 FPNFKHTSLSLSAMIHILVRS----GRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+ + L+ +A + EAH +RS G + + I + + +
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V + R + NV+T N ++ LCK+ K+E+ L ++ E+G PD +YN +++ +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ + A L+ M + P +TYN V+ L + G+++RA EV+ M + G P +
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY ++ C KKG + E K F M + P
Sbjct: 342 TYRSLLMEAC-KKGDVVETEKVFSDMRSRDVVP 373
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 137/254 (53%), Gaps = 4/254 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y +V+ L G L++A ++F+ M C ++ +N L+ + C AG +A + + M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 106 -RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
R EPD ++Y+ I C + + ++L M+ N+ NVFTY+ II+ L K K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
EE+Y++L+EM+ G NPD +++N ++ + A + M + PD +Y++
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 225 VLKLLVRVGRFDRATEVWESMEKR--GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++ L ++G+ D + ++ M R G+ P+V T+S ++HGLC + G+LE+A + F M+
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLC-RTGELEKALEVFGSML 250
Query: 283 DEGIPPYSSTVEML 296
+ G P T L
Sbjct: 251 EAGCKPNKYTYTTL 264
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 41/329 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARK 65
PS+ + L+++ C A F + K E P TY+ L+ GL G ARK
Sbjct: 43 PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARK 102
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF---------- 115
L EM ++ ++ ++S+++++ K +E++ +L EM + G PD F
Sbjct: 103 LLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFA 162
Query: 116 -------------------------SYSIFIHAFCEANDIHSVFRVLD--SMKRYNLVPN 148
SY I IH + + ++L +M+ VPN
Sbjct: 163 RSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPN 222
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
V T++ +I LC+ ++E+A ++ M+E G P++++Y ++A C +V A L
Sbjct: 223 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME-KRGFYPSVSTYSVMVHGLCKK 267
+MT+ + PD YN ++ + G D A +++ M G P++ T++ ++ G C K
Sbjct: 283 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC-K 341
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEML 296
GKL A + M +G+ + T +L
Sbjct: 342 LGKLGRANELVAEMGTKGLAADTCTYRIL 370
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 145/308 (47%), Gaps = 5/308 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P ++ + ++ + +++ A + + + + + P +Y IL+ GL +G+
Sbjct: 142 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 201
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L E+ K+ EM R +++ ++L+ +C+ G +++A + M G +P+ ++Y
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I C A + + + M + + P+ YN +I CK ++EA +L EM
Sbjct: 262 TTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 321
Query: 178 -RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P ++N ++ C ++ A L+ M + + D TY +++ L R + D
Sbjct: 322 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLD 381
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A EV++ M ++ F + V GLC K G +++A FE G P T +L
Sbjct: 382 EALEVYKQMREKKFLLDPVSCVSFVGGLC-KTGNIDQAYAVFEATRKSGAVPNPETFRIL 440
Query: 297 RNRLVGLG 304
L+ LG
Sbjct: 441 SESLIKLG 448
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 122/246 (49%), Gaps = 2/246 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ L+H LC+ ++ A + F + + P TY+ L+ GL ++ +A
Sbjct: 218 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQA 277
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYSIFIH 122
R+LF++M + P D +A+NSL+ CK G++DEA + REM G +P +++ I
Sbjct: 278 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLID 337
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC+ + ++ M L + TY +I L + K++EA ++ +M E+
Sbjct: 338 GFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLL 397
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D S + + C ++ A + K +P+ T+ ++ + L+++GR + A ++
Sbjct: 398 DPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457
Query: 243 ESMEKR 248
E + R
Sbjct: 458 EPAKAR 463
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M + I P + L+ CKR + A + + + PT+ T++ L+ G +G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L A +L EM + D + L+ + +A +DEA + ++MR D S
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
F+ C+ +I + V ++ ++ VPN T+ + L K +VE+A +L++
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 165/373 (44%), Gaps = 44/373 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDV 57
M E G P+++ +L LC + A F E +P V Y+ ++ G
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GE +A LF EM + D++ +N +++A+CKA +D+A +LR+M + GA+PD +Y
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IH + + ++ MK L+PN+ N + LCK+ + +EA ++ D M
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 178 RGANPDEWSY-----------------------------------NAILAYHCDRAEVNM 202
+G PD SY N ++ + R V+
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + T M ++ V PD TY+ V+ R+GR A E + M RG P+ + Y ++
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP-----YSSTVEMLRNRLVGLGFLDIIEILADKME 317
G C G L +A + M+++GIP ++S + L + DI +++ D E
Sbjct: 519 GFC-MHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577
Query: 318 RSTSCTIQELANA 330
R T L +
Sbjct: 578 RPDVITFTSLIDG 590
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 42/338 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P + ++ A + + A + F+ P Y +++G G
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525
Query: 60 LSEARKLFDEMLERKCP-VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L +A++L EM+ + P DI+ NS++ ++CK G + +AH + + IG PD +++
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I +C + F++LD+M+ + ++ TY+ ++ KN ++ + L EM +
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 179 GANPDEWSYNAILA--------------YH---------------------CDRAEVNMA 203
G P+ +Y +LA +H C + A
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L ++ NV N ++ + +V R + A E++ ++ G P+ STY VM+
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIIN 765
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
L K G +E+A F M GI P S L NR++
Sbjct: 766 LL-KDGAVEDANNMFSSMEKSGIVPGSR----LLNRII 798
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 18/277 (6%)
Query: 29 AHQFFDNAKHEFTPTVKT-----YSILVRGLGDVGELSEARKLFDEMLERKC-------- 75
AH FD + TP + L R +++ L + R C
Sbjct: 93 AHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRV 152
Query: 76 -PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
P+ + ++ L++ C+A D + + G + + S + C AN
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212
Query: 135 RVL-DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA--NPDEWSYNAIL 191
VL M VPNVF+Y+ I++ LC N + A L M + G +P+ +YN ++
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
E A L MT++ V PD TYN+++ L + D+A V M G
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P TY+ M+HG G+L+EA K F M G+ P
Sbjct: 333 PDTVTYNCMIHGY-ATLGRLKEAAKMFRKMKSRGLIP 368
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 2/274 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
+ + G +P + L+ C + A + D + T + TYS L+ G G
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++ LF EM + + + + +L + +AG A EM G Y I
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C N + + N+ ++ N +I + K ++ EEA +L + G
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +Y ++ V A + + M K ++P N ++++L+ G +A
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAG 811
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
++ + ST S+M+ L +KGK E
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLS-LFSRKGKYHE 844
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P+++ + + LCK + A + E P V TY+ ++ GL + EA
Sbjct: 325 GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +M+ + +NS+++ CK G + +A+ +L++ G +PD F+Y ++
Sbjct: 385 EECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ D V L P++ YN +I+ LC+ + A QL++EM E+G PD
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
W+YN I+ C ++ A LI + +PD TYN ++ R + D A E+
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVN 564
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
M +G P V TY+ +++GLC K K EE + F+ M ++G P Y++ +E L N
Sbjct: 565 RMWSQGMTPDVITYNTLLNGLC-KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN 622
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 40/322 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++PSI + L+ LC++ + A Q + A+ P + TY++++ GL +G LS+A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L + + + C DI +N+L++ C+ +D A ++ M S G PD +Y+ ++
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ V + +M PN+ TYN II LC ++KV EA LL EM +G PD
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644
Query: 184 EWS------------------------------------YNAILAYHCDRAEVNMALRLI 207
S YN I++ ++ + MALRL
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE-VWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M K PD +TY +++ + G ++ + + E++EK GF PS++T+ +++ LC
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK-GFIPSLTTFGRVLNCLCV 763
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
+ K++EA +MV + I P
Sbjct: 764 EH-KVQEAVGIIHLMVQKDIVP 784
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 143/274 (52%), Gaps = 2/274 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y +V G + G+ AR+LFDEMLE D+ N L+ A+CK G + E+ + ++
Sbjct: 263 YCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVL 322
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G P+ F+++IFI C+ + R+L + R L P+V TYN +I LC+ +V
Sbjct: 323 KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVV 382
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA + L +M+ G P++++YN+I+ +C + V A R++ + PD TY ++
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ G D+A V++ +G PS+ Y+ ++ GLC ++G + A + M ++G
Sbjct: 443 NGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC-QQGLILPALQLMNEMAEKGC 501
Query: 287 PPYSSTVEMLRNRLVGLGFL-DIIEILADKMERS 319
P T ++ N L +G L D ++ D + +
Sbjct: 502 KPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 146/294 (49%), Gaps = 3/294 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + L++ C+ A F D P++ Y+ L++GL G + A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM E+ C DI +N ++ +CK G + +A+ ++ + + G PD F+Y+ +
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + S +++ M + P+V TYN ++ LCK K EE ++ M E+G P+
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN I+ C+ +VN A+ L+ M + + PD ++ ++ +VG D A ++
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669
Query: 244 SMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
MEK+ + +TY++++ ++ ++ A + F M G P + T +L
Sbjct: 670 GMEKQYDVSHTTATYNIIISAF-SEQLNMKMALRLFSEMKKNGCDPDNYTYRVL 722
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + ++ LC++ V A + F P TY+ ++ G G + +A
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ + + + D + SL+ C+ G+ D+A + ++ G P Y+ I
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ I ++++ M P+++TYN II LCK + +A L+ + I +G PD
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ +C + +++ A+ L+ RM + + PD TYN +L L + + + E+++
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M ++G P++ TY+ ++ LC K K+ EA M +G+ P + L +
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSK-KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658
Query: 304 GFLDIIEILADKMERS 319
G LD L ME+
Sbjct: 659 GDLDGAYGLFRGMEKQ 674
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E + P + ++L+HALCK+ V + + FD K P + T++I ++GL G
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L + D++ +N+++ +C+ + EA L +M + G EP+ F+Y+
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + R+L P+ FTY ++ C++ ++A + + + +G
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P YN ++ C + + AL+L+ M ++ PD TYN+++ L ++G A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ +G P + TY+ +V G C++ KL+ A + M +G+ P T L N
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQL-KLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 300 L 300
L
Sbjct: 585 L 585
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 128/247 (51%), Gaps = 1/247 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+V +Y+ ++ L + G ++A K++ M ++K D+ + +++ C+ G A +
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR M +G +A +Y + F E D + D M L P+V T+N ++ LCK
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V E+ +L D++++RG P+ +++N + C ++ A+RL+ +++E + PD T
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 367
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN V+ L R R A E M GF P+ TY+ ++ G C KKG + +A + +
Sbjct: 368 YNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC-KKGMVVDANRILKDA 426
Query: 282 VDEGIPP 288
V +G P
Sbjct: 427 VFKGFKP 433
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 155/333 (46%), Gaps = 6/333 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGELSE 62
F PS+Y + +++ L + + AH+ + K + + V TY+I ++ G
Sbjct: 184 FNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYA 243
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +L M C + +A+ +++ + G+ D A + EM PD +++ +H
Sbjct: 244 ALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVH 303
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+ + R+ D + + + PN+FT+N I+ LCK ++ A +LL + G P
Sbjct: 304 ALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRP 363
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +YN ++ C ++ V A + +M P+ TYN ++ + G A +
Sbjct: 364 DVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRIL 423
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+ +GF P TY +V+G C + G ++A F+ + +G+ P Y++ ++ L
Sbjct: 424 KDAVFKGFKPDEFTYCSLVNGFC-QDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQ 482
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
+ + L L ++ +A+K + T + N +
Sbjct: 483 QGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 5/248 (2%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+R G G++ EA F+ M C + ++N+++ + + G ++AH + M+
Sbjct: 162 MRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV 221
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
E D ++Y+I I +FC ++ R+L +M N Y ++ + + A +
Sbjct: 222 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L DEM+E PD ++N ++ C + V + RL ++ K V P+ T+N+ ++ L
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP-- 288
+ G DRA + + + G P V TY+ ++ GLC+K ++ EA + MV+ G P
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKS-RVVEAEECLHKMVNGGFEPND 400
Query: 289 --YSSTVE 294
Y+S ++
Sbjct: 401 FTYNSIID 408
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 2/216 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + + LL+ LCK K +V F + P + TY+ ++ L + +++EA
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIH 122
L EM + D+++ +L+ CK G++D A+G+ R M + +Y+I I
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
AF E ++ R+ MK+ P+ +TY +I CK V + Y+ L E IE+G P
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++ +L C +V A+ +I M +++++PD
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD-EWSYNAILAYHCDRAEVNMALRLI 207
+FTY +++KL + K E LL EM N E Y + ++ + ++ A+
Sbjct: 119 LFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTF 178
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
RM N P ++YN ++ +LV G F++A +V+ M+ + V TY++ + C+
Sbjct: 179 ERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCR 237
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 175 LDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 234
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCKN +++A+ L+DEM +G
Sbjct: 235 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKG 294
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A + RM +EN+ D Y ++ L + G+ A
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAE 354
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P + TY+++++ C KKG + + K + M G P T +L N
Sbjct: 355 KMLREMLSVGLKPDIGTYTMIINEFC-KKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 412
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 230
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + RM ++++PD TYN ++ L + G +A ++ + M
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A K+ + M+ E I
Sbjct: 291 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFKHRKRMIQENI 330
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 27/317 (8%)
Query: 17 LHALCKRKHVKVAHQFFDNAKH----------------EFTPTVKT----------YSIL 50
LH+ C H HQ AK F ++T +S L
Sbjct: 1 LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G L +A + + E K V +LE + K G E+ G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGY 120
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I +H FC+ DI V D++ ++ L P+V +YN ++ + ++E ++
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T+ ++
Sbjct: 181 LKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHC 240
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A E+++ M + P + TY+ +++GLC K G L++A + M +G+ P
Sbjct: 241 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLC-KNGDLKQAHDLIDEMSMKGLKPDK 299
Query: 291 STVEMLRNRLVGLGFLD 307
T L + G LD
Sbjct: 300 FTYTTLIDGCCKEGDLD 316
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 163/316 (51%), Gaps = 3/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P + L++ LC V A D ++ P + TY+ +V G+ G+
Sbjct: 149 VMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A + +M ER D+ ++++++++C+ G ID A + +EM + G + +Y+
Sbjct: 209 TSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + +L M +VPNV T+N ++ K K++EA +L EMI RG
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN ++ +C + ++ A ++ M + PD T+ ++K V R D
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V+ ++ KRG + TYS++V G C + GK++ A + F+ MV G+ P T +L +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 300 LVGLGFLD-IIEILAD 314
L G L+ +EI D
Sbjct: 448 LCDNGKLEKALEIFED 463
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E +K ++ ++ +LC+ + A F + + +V TY+ LVRGL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L +M+ R+ +++ N LL+ K G + EA+ + +EM + G P+ +Y+
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +LD M R P++ T+ +I+ C ++V++ ++ + +RG
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ +A L M V+PD TY ++L L G+ ++A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++K + Y+ ++ G+CK GK+E+A F + +G+ P T ++ +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANA 330
L G L IL KME CT L A
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 132/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + L+ C + + A+ D +++ +P + T++ L++G V
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + K+F + +R + + ++ L++ C++G I A + +EM S G PD +Y I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + + Y II +CK KVE+A+ L + +G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + ++ A L+ +M ++ P+ TYN +++ +R G +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ E M+ GF S+ +++ L
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G+ D+ + +A LF EM+ + ++ + A+ + + +++ G
Sbjct: 60 LRSGIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ ++ +I I+ FC + VL + + P+ T+N +I LC KV +A
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV 178
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L+D M+E G PD +YN+I+ C + ++A ++ +M + NV D TY+ ++ L
Sbjct: 179 VLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSL 238
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
R G D A +++ ME +G SV TY+ +V GLC K GK + + MV I P
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSREIVPN 297
Query: 290 SSTVEMLRNRLVGLGFL 306
T +L + V G L
Sbjct: 298 VITFNVLLDVFVKEGKL 314
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 8/300 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MV G P I L+ CK RK ++ D+ P V TY++L+ G+
Sbjct: 110 MVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA---VPDVITYNVLISGMCS 166
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G +A KL +M+ R C ++ N L+ +C+ G + A +L +M G P++ S
Sbjct: 167 TGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLS 226
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H FC+ + L M P++ TYN ++ LCK+ KV+ A +LL+++
Sbjct: 227 YNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLS 286
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P +YN ++ + + A +L+ M + + PD TY+ ++ L R G+ D
Sbjct: 287 SKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVD 346
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A + + +E G P+ TY+ ++ GLCK + K + A + MV G P ++ +L
Sbjct: 347 EAIKFFHDLEVLGVKPNAITYNAIMLGLCKAR-KTDRAIDFLAYMVQRGCKPTEASYTIL 405
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 5/243 (2%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL E + + M+ R DI+ SL+ CK G +A ++ + GA PD +Y
Sbjct: 98 GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I C ++L M R P+V T+N +I LC+ + A +L++M +
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P+ SYN +L C ++ A+ + +MT PD TYN +L L + G+ D
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
A E+ + +G P + TY+ ++ GL K GK ++A K + M +G+ P YSS V
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGL-SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLV 336
Query: 294 EML 296
L
Sbjct: 337 GGL 339
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G PS+ + L++ LC++ + A + KH TP +Y+ L+ G +
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK 239
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + +M R C DI+ +N+LL A+CK G +D A +L ++ S G P +Y+
Sbjct: 240 MERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 299
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++LD M+ L P++ TY+ ++ L + KV+EA + ++ G
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNAI+ C + + A+ + M + P +Y ++++ L G A
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E+ + RG S V V
Sbjct: 420 ELLNELCLRGVVKKSSAEKVAV 441
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+ L + + G ++E L M G PD + I FC+ R+++ ++
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
VP+V TYN +I +C + +A +LL +M+ RG +P ++N ++ + C + +
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ ++ +M K P+ +YN +L + + +RA E M RG YP + TY+ ++
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
LC K GK++ A + + +G P T + + L +G D L D+M
Sbjct: 268 ALC-KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 37/173 (21%)
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ KL +N ++EE ++ L+ M+ RG PD +++ C
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFC-------------------- 130
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
++G+ +AT + E +E G P V TY+V++ G+C G+ +A
Sbjct: 131 ---------------KIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMC-STGRWMDAE 174
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA 328
K MV G P T +L N L G L + +KM + CT L+
Sbjct: 175 KLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKH-GCTPNSLS 226
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G I ++ LCK++ A FFDN KH+F P V Y+ LV G G++
Sbjct: 209 MEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDI 268
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA +F EM ++ ++ +++A+C++G I AH + EM G P++ +++
Sbjct: 269 SEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNL 328
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A V +V + MKR ++ TYN +I CK++ + EA ++L+ M +
Sbjct: 329 IRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDC 388
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ S+N I +VN A R+ RM + P+ TYN+++++ D +
Sbjct: 389 TPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFK 448
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M++ P+ +TY ++ C G A +F M+DE I P +M+
Sbjct: 449 LKKEMDEEEVEPNFNTYRELIALYC-GMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEE 507
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L DKM
Sbjct: 508 LRKAGQLKKHEELVDKM 524
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
TV T+S+LVR G +EA F+ M + C DI+A ++++ +CK EA
Sbjct: 182 TVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFF 241
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
++ EPD Y+ +H +C A DI V MK + PNV+TY+ +I LC++
Sbjct: 242 DNLKH-KFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRS 300
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
++ A+ + EM++ G NP+ ++N ++ H L++ +M + D TY
Sbjct: 301 GQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITY 360
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N +++ + A +V SM K P+ S+++ + + K + + A + F M
Sbjct: 361 NFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQ-DVNGAHRMFARMK 419
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ G P + T +L D+I L +M+
Sbjct: 420 EVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMD 454
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 151/287 (52%), Gaps = 13/287 (4%)
Query: 8 PSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
P ++ + LL+ LC ++ +++ H D+ + P V +YS ++ G G+L
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGG-DCPPDVVSYSTVINGFFKEGDL--- 104
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+ML+++ +++ +NS++ A+CKA +D+A +L M G PD +Y+ +H
Sbjct: 105 ----DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + L M+ + P+V TYN ++ LCKN + EA ++ D M +RG PD
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L + + + L+ M + + P+ + +++++ + + + A V+
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P S
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLC-KSGRVEDAMLYFEQMIDEGLRPDS 326
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFSYSI 119
+AR +FDE+L R P D+ ++N LL +C EA +L M G + PD SYS
Sbjct: 35 DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F + D LD M + PNV TYN II LCK + V++A ++L M++ G
Sbjct: 94 VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+I+ C + A+ + +M + V PD TYN ++ L + GR A
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++SM KRG P ++TY ++ G KG L E ++MV GI P
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGY-ATKGALVEMHGLLDLMVRNGIHP 254
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P++ + ++ ALCK + V A + K P TY+ +V G G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +M D++ +NSL++ +CK G EA + M G +PD +Y
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + +LD M R + PN + ++ ++ K EKVEEA + +M ++G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +Y ++ C V A+ +M E + PD YN ++ L ++++A
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M RG S ++ ++ C K+G++ E+ K F++MV G+ P
Sbjct: 347 ELFLEMLDRGICLSTIFFNSIIDSHC-KEGRVIESGKLFDLMVRIGVKP 394
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + ++H C K A F + + P V TY+ L+ L G
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EARK+FD M +R DI + +LL+ G + E HG+L M G P+ + +SI
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ + + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN+++ C + A L M + +N ++ + GR +
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381
Query: 240 EVWESMEKRGFYPSVST 256
++++ M + G P + T
Sbjct: 382 KLFDLMVRIGVKPDIIT 398
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL------------------------ 171
V D + R +P+VF+YN ++ LC + +EA +L
Sbjct: 39 VFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 172 ------LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
LD+M+++ +P+ +YN+I+A C V+ A+ ++T M K VMPD TYN +
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G+ A + M G P V TY+ ++ LC K G+ EA K F+ M G
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC-KNGRCTEARKIFDSMTKRG 216
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ P +T L G L + L D M R+
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 37/345 (10%)
Query: 6 IKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P+ L L+ LCK KH +F + F + T + L+ GL G + EA
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +MLER +D + +N+L+ CK G ++E + EM G EPD F+Y++ IH
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFT--------------------------------- 151
C + + + K +LVPNV+T
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698
Query: 152 --YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
YN +IR C+N EA++L D+M +G P +Y++++ C+ + A LI
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M KE ++P+ Y ++ ++G+ D+ V + M +P+ TY+VM+ G K G
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY-SKSG 817
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
++ A K MV +GI P + T +L N G ++ ++LA+
Sbjct: 818 DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 146/283 (51%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y ++A CK V+ A Q FFD K +P V TY+ L+ GL G L EA
Sbjct: 308 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 367
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++M++ ++ ++ L+ + K +EA+ +L+E G P+ Y+ I
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDG 427
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ R+ M + PN T N II+ CK ++E+A +L+EM+ RG + +
Sbjct: 428 YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 487
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ I+ + C + ALR + M N+ P+ ++ L + G+ A E+W
Sbjct: 488 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF 547
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ ++GF ++ T + ++HGLC K G ++EA + + M++ G
Sbjct: 548 RLLEKGFGANLVTTNALIHGLC-KTGNMQEAVRLLKKMLERGF 589
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 158/310 (50%), Gaps = 6/310 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + L+H LCK ++ A +F + K T+ TYS+L+ GL + +
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA + E LE+ + + +N+L++ CK GN+ +A + +M S G P++ + +
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I FC+ + +L+ M + +++ P FT II LC N + E A + L EM+
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT--TIIHWLCMNSRFESALRFLREMLL 516
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
R P++ ++ C + + A+ L R+ ++ + T N ++ L + G
Sbjct: 517 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQE 576
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + + M +RGF TY+ ++ G C K+GK+EE K MV +GI P + T +L
Sbjct: 577 AVRLLKKMLERGFVLDKITYNTLISGCC-KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 635
Query: 298 NRLVGLGFLD 307
+ + +G LD
Sbjct: 636 HGMCRIGKLD 645
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 160/337 (47%), Gaps = 13/337 (3%)
Query: 9 SIYDLDQLLHALCKR------KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++ +D L+H C + ++ +F N K F PTVKT + L+ L EL +
Sbjct: 240 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLAN-KGVF-PTVKTCTFLLSSLVKANELEK 297
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ +F+ M + P D+ ++ + A CK G +++A + +M +G P+ +Y+ IH
Sbjct: 298 SYWVFETMRQGVSP-DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIH 356
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ FR + M + + + TY+ +I L K EK EA +L E +E+G P
Sbjct: 357 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTP 416
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+E YN ++ +C + ALR+ M + + P+ T N +++ ++G+ ++A +
Sbjct: 417 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 476
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E M RGF + ++ ++H LC + E A ++ M+ + P + L L
Sbjct: 477 EEMLSRGFSINPGAFTTIIHWLCMNS-RFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535
Query: 303 LG-FLDIIEILADKMERSTSCTIQELANAMRG--KTG 336
G D +E+ +E+ + + G KTG
Sbjct: 536 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV GI P+ L+ ++ CK ++ A + F+ ++ ++ L
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A + EML R P D L +L+ +CK G +A + + G + + +
Sbjct: 504 FESALRFLREMLLRNMRPNDGLL-TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH C+ ++ R+L M V + TYN +I CK KVEE ++L EM+++
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++YN ++ C +++ A+ L +++P+ +TY +++ + + +
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ + + + Y+ ++ C + G EA K + M +GIPP ++T L +
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYC-RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741
Query: 299 RLVGLGFLDIIEILADKMER 318
+ +G ++ + L D+M +
Sbjct: 742 GMCNIGRMEDAKCLIDEMRK 761
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ A C+ + A + D+ + + PT TYS L+ G+ ++G + +A+ L DEM +
Sbjct: 702 NTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK 761
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+++ + +L+ CK G +D+ +L+EM S P+ +Y++ I + ++ D+ +
Sbjct: 762 EGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKT 821
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
++L M +VP+ TYN + CK K+EE L ++ +
Sbjct: 822 AAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGV 865
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 37/329 (11%)
Query: 6 IKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P+ L L+ LCK KH +F + F + T + L+ GL G + EA
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +MLER +D + +N+L+ CK G ++E + EM G EPD F+Y++ IH
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFT--------------------------------- 151
C + + + K +LVPNV+T
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631
Query: 152 --YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
YN +IR C+N EA++L D+M +G P +Y++++ C+ + A LI
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M KE ++P+ Y ++ ++G+ D+ V + M +P+ TY+VM+ G K G
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY-SKSG 750
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ A K MV +GI P + T +L N
Sbjct: 751 DMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 146/282 (51%), Gaps = 2/282 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y ++A CK V+ A Q FFD K +P V TY+ L+ GL G L EA
Sbjct: 241 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 300
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++M++ ++ ++ L+ + K +EA+ +L+E G P+ Y+ I
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDG 360
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++ R+ M + PN T N II+ CK ++E+A +L+EM+ RG + +
Sbjct: 361 YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 420
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ I+ + C + ALR + M N+ P+ ++ L + G+ A E+W
Sbjct: 421 PGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF 480
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ ++GF ++ T + ++HGLC K G ++EA + + M++ G
Sbjct: 481 RLLEKGFGANLVTTNALIHGLC-KTGNMQEAVRLLKKMLERG 521
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 135/264 (51%), Gaps = 1/264 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ GI+P + + L+H +C+ + A ++ K + P V TY +++ G +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KLF E+L + ++ + +N+L+ A C+ GN EA + +MRS G P +YS
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + ++D M++ L+PNV Y +I CK ++++ +L EM
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++ +Y ++ + ++ A +L+ M + ++PD TYN++ + G+ +
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791
Query: 240 EVWESMEKRGFYPSVSTYSVMVHG 263
++ + M + G TY+ +VHG
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHG 815
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 158/310 (50%), Gaps = 6/310 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + L+H LCK ++ A +F + K T+ TYS+L+ GL + +
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA + E LE+ + + +N+L++ CK GN+ +A + +M S G P++ + +
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I FC+ + +L+ M + +++ P FT II LC N + E A + L EM+
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFT--TIIHWLCMNSRFESALRFLREMLL 449
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
R P++ ++ C + + A+ L R+ ++ + T N ++ L + G
Sbjct: 450 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQE 509
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + + M +RGF TY+ ++ G C K+GK+EE K MV +GI P + T +L
Sbjct: 510 AVRLLKKMLERGFVLDKITYNTLISGCC-KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLI 568
Query: 298 NRLVGLGFLD 307
+ + +G LD
Sbjct: 569 HGMCRIGKLD 578
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 146/298 (48%), Gaps = 10/298 (3%)
Query: 9 SIYDLDQLLHALCKR------KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++ +D L+H C + ++ +F N K F PTVKT + L+ L EL +
Sbjct: 173 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLAN-KGVF-PTVKTCTFLLSSLVKANELEK 230
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ +F+ M + P D+ ++ + A CK G +++A + +M +G P+ +Y+ IH
Sbjct: 231 SYWVFETMRQGVSP-DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIH 289
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ FR + M + + + TY+ +I L K EK EA +L E +E+G P
Sbjct: 290 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTP 349
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+E YN ++ +C + ALR+ M + + P+ T N +++ ++G+ ++A +
Sbjct: 350 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 409
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
E M RGF + ++ ++H LC + E A ++ M+ + P + L L
Sbjct: 410 EEMLSRGFSINPGAFTTIIHWLCMNS-RFESALRFLREMLLRNMRPNDGLLTTLVGGL 466
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV GI P+ L+ ++ CK ++ A + F+ ++ ++ L
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A + EML R P D L +L+ +CK G +A + + G + + +
Sbjct: 437 FESALRFLREMLLRNMRPNDGLL-TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH C+ ++ R+L M V + TYN +I CK KVEE ++L EM+++
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++YN ++ C +++ A+ L +++P+ +TY +++ + + +
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ + + + Y+ ++ C + G EA K + M +GIPP ++T L +
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYC-RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674
Query: 299 RLVGLGFLDIIEILADKMER 318
+ +G ++ + L D+M +
Sbjct: 675 GMCNIGRMEDAKCLIDEMRK 694
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ L+ CK + KV + + + ++ P TY++++ G G++ A
Sbjct: 696 GLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTA 755
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL EM+ + D + +N L CK G I+E + M G D +Y+ +H
Sbjct: 756 AKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Query: 124 F 124
+
Sbjct: 816 W 816
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 49/178 (27%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES------------------ 244
A+ + + + V P T +L LV+ +++ V+E+
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINA 255
Query: 245 ----------------MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
MEK G P+V TY+ ++HGLC K G L+EA ++ E MV +G+
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC-KHGNLDEAFRFKEKMVKDGVNA 314
Query: 289 YSSTVEMLRNRLVGL-GFLDIIEILADKMERSTS-------------CTIQELANAMR 332
T +L N L+ L F + +L + +E+ + C + L +A+R
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 162/344 (47%), Gaps = 52/344 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G+ PS+ L+H++CK ++ A +F D + P +TY+ LV G G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA ++ EM + ++ +N+L+ C G +++A +L +M+ G PD SYS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC + D+ RV M + P+ TY+ +I+ C+ + +EA L +EM+ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y A++ +C ++ AL+L M ++ V+PD TY++++
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL+++ G A +V+ESM +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
P + Y++M+HG C + G + +A ++ MV G ++ TV
Sbjct: 636 HKPDGTAYNIMIHGHC-RAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 148/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L+ CK + + + + A P + +Y++++ GL G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM R +D + +N+L++ CK GN +A M EM G P +Y+ IH+
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ LD M+ L PN TY ++ + + EAY++L EM + G +P
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ HC ++ A+ ++ M ++ + PD +Y+ VL R D A V
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M ++G P TYS ++ G C+++ + +EAC +E M+ G+PP T L N
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQR-RTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G P + + +L A + ++++ A F + + + +P V TY+IL+RG G +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A LFD+M + C +++ +N+L++ CK ID+ +LR M G EP+ SY++ I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + V VL M R + TYN +I+ CK +A + EM+ G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y +++ C +N A+ + +M + P+ TY ++ + G + A V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M GF PSV TY+ +++G C GK+E+A E M ++G+ P
Sbjct: 404 REMNDNGFSPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSP 448
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 5/266 (1%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNI 95
+H TP+V TY+ L+ + G ++ A + D+M R CP + + +L++ + G +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE-RTYTTLVDGFSQKGYM 396
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+EA+ +LREM G P +Y+ I+ C + VL+ MK L P+V +Y+ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ C++ V+EA ++ EM+E+G PD +Y++++ C++ A L M + +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD TY ++ G ++A ++ M ++G P V TYSV+++GL K+ E
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 276 KYFEMMVDEGIPP---YSSTVEMLRN 298
++ +E +P Y + +E N
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 51/292 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G PS+ + L++ C ++ A ++ K + +P V +YS ++ G +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ EM+E+ D + ++SL++ C+ EA + EM +G PD F+Y+
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY--------------------------- 152
I+A+C D+ ++ + M ++P+V TY
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 153 -------------NC----------IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
NC +I+ C + EA Q+ + M+ + PD +YN
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
++ HC ++ A L M K + T ++K L + G+ + V
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 16/234 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L++A C ++ A Q + + P V TYS+L+ GL
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 60 LSEARKLFDEML-ERKCPVDILAHN--------------SLLEAMCKAGNIDEAHGMLRE 104
EA++L ++ E P D+ H SL++ C G + EA +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +PD +Y+I IH C A DI + + M + + + T +++ L K K
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
V E ++ ++ + ++ + +++ L ++ M K+ +P+
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK-VEEAYQLLDEM 175
+ + + ++ + I ++ + + +P V +YN ++ ++++ + A + EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+E +P+ ++YN ++ C +++AL L +M + +P+ TYN ++ ++ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
D ++ SM +G P++ +Y+V+++GLC ++G+++E
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLC-REGRMKEV 294
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++V+K R+ D+A + + GF P V +Y+ ++ + K + A F+ M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
++ + P T +L G +D+ L DKME
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P I ++ +CK H++VA++ + + P V Y+ +++GL
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L EM ++ CP+D + N L++ C+ G +D +L +M S G PD +Y+
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC + +A +L+ +MI++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ + A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M +G P+ YS + L ++G++ + + F+ + D I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACAL-SREGRVNKVIQMFDNIKDTTI 562
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
+ + +L+A+C++ V A A + +Y+ +++GL + +L DEM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ C +I+ N+L+ +C+ G + H +L +M G PD Y+ I C+ +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+L+ M Y L PNV YN +++ LC E+ +EA +LL EM ++ D+ ++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + C V+ + L+ +M MPD TY V+ + G D A + +SM G
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-II 309
P+ +Y++++ GLC G+ +A + M+ +G PP T L N L G ++ I
Sbjct: 423 KPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 310 EILADKMERSTS 321
E+L + S
Sbjct: 482 ELLKQMLVNGCS 493
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 6/296 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+I + L+ LC+ + H+ ++H TP ++ Y+ ++ G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ + M +++ +N++L+ +C A EA +L EM D +++I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + V +L+ M + +P+V TY +I CK ++EA LL M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY +L C A L+++M ++ P+ T+N ++ L + G ++A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSS 291
E+ + M G P + +YS ++ GL K GK EEA + +MV++GI P YSS
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 38/351 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ LC R + A + D + P Y +++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ + M + C +D N +L A+C+ G +DEA G+LR++ G E D SY+ +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V ++D M R + PN+ T+N +I LC+N E +++L +M E G PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN VLK L R+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M G P V TY+ +++G C K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-KEG 405
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
++EA + M G P + + ++ L G ++D E+++ +++
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 6/298 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FG + I + +L LC K + D + + P + T++ L+ L G
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
++ +M E C DI + ++++ +CK G+++ A+ +L M S G +P+ Y+ +
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C A +L M + + + T+N ++ C+N V+ +LL++M+ G P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y ++ C ++ A+ L+ M+ P+ +Y +VLK L GR+ A E+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M ++G P+ T++ +++ LC KKG +E+A + + M+ G P YS+ ++ L
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLC-KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P + +++ CK + A + + P +Y+I+++GL G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +M+++ CP + + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + +V + Q+ D + +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E + A+ M MP+ TY M++K L G A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 240 EVWESMEKRG 249
E+ + RG
Sbjct: 622 ELLSELCSRG 631
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P+ + L++ LCK+ V+ A + + +P + +YS ++ GLG G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+ + + + ++S+ A+ + G +++ M ++ DA Y+
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M +PN TY +I+ L +EA +LL E+ RG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Query: 180 A 180
A
Sbjct: 632 A 632
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 39/245 (15%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++A+N+++ C+AG + R ++ P+A+++ + C I VLD
Sbjct: 79 VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M P Y+ I+ C++ + ++L+ M +G D + N +L C++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLK------------------------------- 227
V+ A+ L+ ++ D +YN VLK
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 228 ----LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
L R G F+R EV M + G P + Y+ ++ G+C K+G LE A + M
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPS 314
Query: 284 EGIPP 288
G+ P
Sbjct: 315 YGLKP 319
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 161/317 (50%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G KP ++ +L K++ A FFD+ K F P V Y+ LV G G +
Sbjct: 1239 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNI 1298
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA ++F EM ++ ++ +++A+C++G I AH + EM +G +P+A +++
Sbjct: 1299 SEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNL 1358
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MKR P+ TYN +I C+++ +EEA ++L+ +++G
Sbjct: 1359 MRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGC 1417
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
N + S+N I +VN A R+ +M P+ TYN+++++ D +
Sbjct: 1418 NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLK 1477
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M++ P+ +TY V++ C G A +F+ M++E + P EM+ +
Sbjct: 1478 LRKEMDENEIEPNANTYRVLISTFC-GIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQ 1536
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 1537 LRKAGQLKKHEELVEKM 1553
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 38/301 (12%)
Query: 32 FFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAM 89
FF+ A + EF + + Y ++ G V + A +L D M R + + L+
Sbjct: 1164 FFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRY 1223
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI---------------------------- 121
KAG EA M G +PD ++S+ I
Sbjct: 1224 VKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVV 1283
Query: 122 ------HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
H +C A +I RV MK + PNV+TY+ +I LC++ ++ A+ + EM
Sbjct: 1284 VYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEM 1343
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
I+ G +P+ ++N ++ H L++ +M + PD TYN +++ R
Sbjct: 1344 IDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNL 1403
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ A ++ S+ K+G + S+++ + G K G + A + F M D P + T +
Sbjct: 1404 EEAVKILNSV-KKGCNLNASSFNP-IFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNI 1461
Query: 296 L 296
L
Sbjct: 1462 L 1462
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
++++D MK N+ V T+ ++R+ K EA + M + G PD+ +++ +++
Sbjct: 1198 WQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISS 1257
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
+ A + K+ PD Y ++ R G A V+ M+ G P+
Sbjct: 1258 LSKKRRAIEAQSFFDSL-KDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPN 1316
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
V TYS+++ LC+ G++ A F M+D G P + T L V G + + +
Sbjct: 1317 VYTYSIVIDALCRS-GQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVY 1375
Query: 314 DKMER 318
++M+R
Sbjct: 1376 NQMKR 1380
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 159/311 (51%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P+ + L+ CK ++V A + F+ K P + TY+ L+ GL + G+
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGK 323
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L+D+M+ +I+ +N+L+ CK + EA + ++ P+ +++
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ + F + SM ++PNV TYNC+I LC+ + ++ A +LL+EM +G
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + A +L+ M + P+ TYN ++ G+ A
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V MEK P+V TY+V++ G C K KLE A M+++G+ P +T +++R
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYC-KINKLEAANGLLNEMLEKGLNPNRTTYDIVRLE 562
Query: 300 LVGLGFLDIIE 310
++ GF IE
Sbjct: 563 MLEKGFSPDIE 573
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 147/288 (51%), Gaps = 5/288 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+D L+ A K + A++ F AK + F ++ + + L+ L ++ + ++ EM+
Sbjct: 133 IDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMI 192
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+R+ ++ N + +C+AG +++A + +M++ G P+ +Y+ + +C+
Sbjct: 193 KRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAG 252
Query: 132 SVFRVLDSMKRY---NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+++ MK + PN T+N +I CK+E V A + +EM ++G P+ +YN
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+++ C+ ++ A+ L +M + P+ TYN ++ + AT+V++ + K+
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P+V T++ M+ CK+ G +EE M+DEGI P ST L
Sbjct: 373 ELVPNVITFNTMIDAYCKE-GMMEEGFSLCSSMLDEGILPNVSTYNCL 419
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 32/311 (10%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD----NAKHEFTPTVKTYSILVRGLGDV 57
+ +G++P+ ++LH L K F D N KH + +S+L+ G G
Sbjct: 74 LSYGLEPT----SKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVF--HSLLLDG-GRP 126
Query: 58 G-----------------ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
G EL A + F + + + + N LL A+ K I +
Sbjct: 127 GATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEY 186
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ +EM + +++IFI+ C A ++ ++ MK + + PNV TYN ++ C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 161 KNEKVEEAYQ---LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
K + Y+ + EM+ P+E ++N ++ C V A + M K+ + P
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+ TYN ++ L G+ + A ++W+ M G P++ TY+ +++G CKKK ++EA K
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKK-MMKEATKV 365
Query: 278 FEMMVDEGIPP 288
F+ + + + P
Sbjct: 366 FDDVSKQELVP 376
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 167/389 (42%), Gaps = 70/389 (17%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILV-----RGLGD 56
+FG+ PS++ + L++++CK + A F+N H+ P TYSIL+ RG D
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407
Query: 57 V------------------------------GELSEARKLFDEMLERKCPVDILAHNSLL 86
V G+L A+ LFDEM+ +++ + SL+
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
CK G + A + EM G P+ ++++ I C AN + ++ M +N++
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
PN TYN +I CK A++LLDEM+E+G PD ++Y +++ C V+ A
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ + E + ++ +L + GR D A + M RG + YSV+++G+ +
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647
Query: 267 ----------------------------------KKGKLEEACKYFEMMVDEGIPPYSST 292
K G L+ A +++MV EG P T
Sbjct: 648 QQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERSTS 321
L N L +G +D E+L +M S S
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNS 736
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++ + L+ LCK + + + + + F P+ S LV GL G + A
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +++ + + +N+L+ +MCK G +DEA + M G P+ +YSI I +
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + L M + V+ Y+ +I CK K+ A L DEMI G P+
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++++ +C E++ A RL MT + + P+ +T+ ++ L R A +++
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + P+ TY+V++ G C K+G A + + MV++G+ P + T L + L
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHC-KEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578
Query: 304 G 304
G
Sbjct: 579 G 579
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
+V G++P +Y ++ +LC+ K A + + +V TY++ +RGL
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ + + + D+ + +L+ +CK + M+ EM G P + S
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + +I S F +++ +K++ + P++F YN +I +CK+ K++EA L + M +G
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ +Y+ ++ C R ++++AL + +MT+ + + Y+ ++ ++G+ A
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAK 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M G P+V Y+ ++ G C K+G+L A + + M +GI P + T L
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYC-KEGELHNAFRLYHEMTGKGISPNTYTFTAL 501
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 3/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE+ + P+ + L+ CK + A + D + P TY L+ GL G
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR+ +++ + ++ + ++LL CK G +D+A REM G D YS+
Sbjct: 581 VSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ D S+ +L M L P+ Y +I K ++ A+ L D M+ G
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y A++ C ++ A L M N +P+++TY L L G ++A
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 760
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ + + + GF + TY++++ G C K G+++EA + M+D GI P
Sbjct: 761 QLHDVLLE-GFLANTVTYNILIRGFC-KLGRIQEAAEVLVNMIDSGISP 807
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 3/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
MVE G+ P Y L+ LC V A +F ++ + E + +S L+ G G
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGR 615
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A EML R +D++ ++ L+ + + + +L++M G PD Y+
Sbjct: 616 LDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTT 675
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A +A ++ F + D M +PNV TY +I LCK +++A L EM+
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 735
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P++ +Y L Y + A++L + E + + TYN++++ ++GR A
Sbjct: 736 SLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAA 794
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV +M G P +YS +++ C ++G L+EA K +E M++ G+ P
Sbjct: 795 EVLVNMIDSGISPDCISYSTIIYEYC-RRGDLKEAIKLWESMLNRGVNP 842
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 4/244 (1%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
+R + + Q D P Y+ ++ G L A L+D M+ C +++
Sbjct: 651 RRSIIDLLKQMHDQG---LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+ +L+ +CK G +D+A + REM + + P+ +Y+ F+ +I ++ D +
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 767
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ N TYN +IR CK +++EA ++L MI+ G +PD SY+ I+ +C R ++
Sbjct: 768 E-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 826
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A++L M V PD YN ++ G +A E+ + M +RG P+ +TY+ ++
Sbjct: 827 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Query: 262 HGLC 265
HG C
Sbjct: 887 HGTC 890
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P ++T S ++ GL + + A LFDE++ D+ + +++ ++C+ + A +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ M S G + +Y++FI C+ + + + + L +V TY ++ LCK
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
E+ E ++++EMIE G P E + + ++ + + A L+ ++ K V P
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ + + G+ D A ++ +M +G +P+ TYS+++ C K+GKL+ A + M
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC-KRGKLDVALHFLGKM 416
Query: 282 VDEGIP----PYSSTVE 294
+ GI PYSS +
Sbjct: 417 TEVGIKATVYPYSSLIS 433
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P I L +L+ L + + ++A FD P V Y+ +VR L ++ +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
AR++ M C + + +N + +CK + EA + + G D +Y
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +++ M + VP+ + ++ L K + A+ L++++ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + YNA++ C +++ A L M + + P+ TY++++ + G+ D A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + G +V YS ++ G C K GKL A F+ M+ G+ P
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHC-KLGKLRAAKSLFDEMIANGLKP 458
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ L++ LCK + A + P TY+ + L G
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 755
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L D +LE + + +N L+ CK G I EA +L M G PD SYS
Sbjct: 756 IEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C D+ ++ +SM + P+ YN +I C ++ +A++L D+M+ RG
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874
Query: 180 ANPDEWSYNAILAYHCDRAEVN 201
P+ +YN+++ C + V+
Sbjct: 875 VKPNRATYNSLIHGTCLMSSVS 896
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 18/298 (6%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
++VR + D G L + R L + +L + + A + E+ S
Sbjct: 166 VVVRLMMDCGILPQIRTL----------------SGVLNGLIRIRQFRMALHLFDEIVSS 209
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD + Y+ + + CE D V+ M+ +V TYN IR LCKN++V EA
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++ + + +G D +Y ++ C E ++ M + +P + ++
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G A ++ ++K G PS+ Y+ +++ +CK GKL+EA F M +G+ P
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD-GKLDEAESLFNNMGHKGLFP 388
Query: 289 YSSTVEMLRNRLVGLGFLDI-IEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
T +L + G LD+ + L E T+ ++ + G K R+ ++
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ CK ++ A + N +P +YS ++ G+L EA KL++ ML R
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
D +A+N L+ C G + +A + +M G +P+ +Y+ IH C + + S
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 898
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 8/322 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
V P L+ LL A CK VK A F K + +TYS L G +
Sbjct: 209 VRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPK 268
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG---AEPDAFSYS 118
+A K+ +EM++ K + + + +E+ C AG + EA + MR+ G + P A +YS
Sbjct: 269 KAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYS 328
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I A +A+ + F +L M+ +P+V TY +I +C +++ AY++LDEM
Sbjct: 329 IMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRA 388
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C + AL L RM + + P HTYNM++ + +G RA
Sbjct: 389 GFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRA 448
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++W M+KRG ++ TY +M++GL C G+ E A + +++ + + +
Sbjct: 449 LDIWLEMDKRGCQRAIDTYEIMIYGLFDC---GETEYATALLDEVINRDMKLSYKKFDAI 505
Query: 297 RNRLVGLGFLDIIEILADKMER 318
RL +G L I L++ M +
Sbjct: 506 MLRLSAVGNLGAIHRLSEHMRK 527
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P + ++ +CK + ++VA + + +P V Y+ L++GL
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L EM ++ CP+D + N L++ +C+ G +D +L +M G PD +Y+
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC E+ +A +L+ +MI++G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G D A
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M K+G P+ YS + L +G++ + + FE + D +
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASAL-SGEGRINKVIQMFENIQDTTV 563
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 4/320 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSE 62
G + + + +L A+C + V A + + F P V +Y+ ++RGL
Sbjct: 176 GCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGH 235
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ L +EM+ CP +I+ ++L+ +C+ G + H + +M G PD Y+ I
Sbjct: 236 VQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID 295
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + +L+ M Y L PNV YN +++ LC ++ EEA LL EM ++
Sbjct: 296 GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL 355
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D+ ++N ++ + C V+ + ++ +M + MPD TY V+ + G D A +
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
SM G P+ +Y++++ GLC + + +A + M+ +G PP T L N L
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAE-RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 474
Query: 303 LGFLD-IIEILADKMERSTS 321
G ++ IE+L + S
Sbjct: 475 KGLVEQAIELLKQMLVNGCS 494
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 38/320 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y L+ ALC R + A D+ A+ PT Y + + A
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE-MRSIGAEPDAFSYSIFIHA 123
+ ++ R C +D+ N +L+A+C G +DEA +LR+ + S G EPD SY+ +
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A V +++ M PN+ T++ +I LC+N E +++ +M E G PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMP-------------------------- 217
Y I+ C + +A ++ RM + P
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 218 ---------DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
D T+N+++ L + G DR EV E M + G P V TY+ +++G C K+
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFC-KE 405
Query: 269 GKLEEACKYFEMMVDEGIPP 288
G ++EA M G P
Sbjct: 406 GLIDEAVMLLRSMAACGCRP 425
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P + +++ CK + A + A P +Y+I+++GL
Sbjct: 383 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAER 442
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +M+++ CP + + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 443 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 502
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A + +L+ M + + PN Y+ I L ++ + Q+ + + +
Sbjct: 503 VIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTT 562
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E + A+ + M +P+ TY ++++ L G A
Sbjct: 563 VRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 622
Query: 240 EVWESMEKRG 249
E+ + +G
Sbjct: 623 EILTELCSKG 632
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TY LVR L G +++A + D+M R C ++ LEA C+A A G
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL-DSMKRYNLVPNVFTYNCIIRKL 159
+LR++ G D + ++ + A C+ + R+L D + + P+V +YN ++R L
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C + L++EM+ G P+ +++ ++ + C + +M + PD
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
Y ++ + + R + A + M G P+V Y+ ++ GLC + EEA
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSAD-RWEEAEGLLA 346
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
M D+ P T +L + L G +D +IE+L +E
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE 385
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+N+++ C+AG + R S+ P+A++Y + A C I VLD M
Sbjct: 82 YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P Y+ + C+ A +L ++ RG D + N +L CD+ V+
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 202 MALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A+RL+ + PD +YN VL+ L R+ ++ E M G P++ T+S +
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ LC + G E + M + G P
Sbjct: 259 IGHLC-RNGLFERVHEVHAQMAEHGCAP 285
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 8/322 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
V P L+ LL A CK VK A F K + +TYS L G +
Sbjct: 209 VRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPK 268
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG---AEPDAFSYS 118
+A K+ +EM++ K + + + +E+ C AG + EA + MR+ G + P A +YS
Sbjct: 269 KAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYS 328
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I A +A+ + F +L M+ +P+V TY +I +C +++ AY++LDEM
Sbjct: 329 IMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRA 388
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C + AL L RM + + P HTYNM++ + +G RA
Sbjct: 389 GFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRA 448
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++W M+KRG ++ TY +M++GL C G+ E A + +++ + + +
Sbjct: 449 LDIWLEMDKRGCQRAIDTYEIMIYGLFDC---GETEYATALLDEVINRDMKLSYKKFDAI 505
Query: 297 RNRLVGLGFLDIIEILADKMER 318
RL +G L I L++ M +
Sbjct: 506 MLRLSAVGNLGAIHRLSEHMRK 527
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P I ++ +CK H++VA++ + + P V Y+ +++GL
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L EM ++ CP+D + N L++ C+ G +D +L +M S G PD +Y+
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC + +A +L+ +MI++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ + A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M +G P+ YS + L ++G++ + + F+ + D I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACAL-SREGRVNKVIQMFDNIKDTTI 562
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
+ + +L+A+C++ V A A + +Y+ +++GL + +L DEM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ C +I+ N+L+ +C+ G + H +L +M G PD Y+ I C+ +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+L+ M Y L PNV YN +++ LC E+ +EA +LL EM ++ D+ ++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + C V+ + L+ +M MPD TY V+ + G D A + +SM G
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-II 309
P+ +Y++++ GLC G+ +A + M+ +G PP T L N L G ++ I
Sbjct: 423 KPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 310 EILADKMERSTS 321
E+L + S
Sbjct: 482 ELLKQMLVNGCS 493
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 6/296 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+I + L+ LC+ + H+ ++H TP ++ Y+ ++ G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ + M +++ +N++L+ +C A EA +L EM D +++I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + V +L+ M + +P+V TY +I CK ++EA LL M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY +L C A L+++M ++ P+ T+N ++ L + G ++A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSS 291
E+ + M G P + +YS ++ GL K GK EEA + +MV++GI P YSS
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 38/351 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ LC R + A + D + P Y +++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ + M + C +D N +L A+C+ G +DEA G+LR++ G E D SY+ +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V ++D M R + PN+ T+N +I LC+N E +++L +M E G PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN VLK L R+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M G P V TY+ +++G C K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-KEG 405
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
++EA + M G P + + ++ L G ++D E+++ +++
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 6/298 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FG + I + +L LC K + D + + P + T++ L+ L G
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
++ +M E C DI + ++++ +CK G+++ A+ +L M S G +P+ Y+ +
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C A +L M + + + T+N ++ C+N V+ +LL++M+ G P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y ++ C ++ A+ L+ M+ P+ +Y +VLK L GR+ A E+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M ++G P+ T++ +++ LC KKG +E+A + + M+ G P YS+ ++ L
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLC-KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P + +++ CK + A + + P +Y+I+++GL G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +M+++ CP + + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + +V + Q+ D + +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E + A+ M MP+ TY M++K L G A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 240 EVWESMEKRG 249
E+ + RG
Sbjct: 622 ELLSELCSRG 631
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 39/245 (15%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++A+N+++ C+AG + R ++ P+A+++ + C I VLD
Sbjct: 79 VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M P Y+ I+ C++ + ++L+ M +G D + N +L C++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLK------------------------------- 227
V+ A+ L+ ++ D +YN VLK
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 228 ----LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
L R G F+R EV M + G P + Y+ ++ G+C K+G LE A + M
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPS 314
Query: 284 EGIPP 288
G+ P
Sbjct: 315 YGLKP 319
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P+ + L++ LCK+ V+ A + + +P + +YS ++ GLG G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+ + + + ++S+ A+ + G +++ M ++ DA Y+
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M +PN TY +I+ L +EA +LL E+ RG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Query: 180 A 180
A
Sbjct: 632 A 632
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P I ++ +CK H++VA++ + + P V Y+ +++GL
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L EM ++ CP+D + N L++ C+ G +D +L +M S G PD +Y+
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC + +A +L+ +MI++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ + A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M +G P+ YS + L ++G++ + + F+ + D I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACAL-SREGRVNKVIQMFDNIKDTTI 562
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
+ + +L+A+C++ V A A + +Y+ +++GL + +L DEM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ C +I+ N+L+ +C+ G + H +L +M G PD Y+ I C+ +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+L+ M Y L PNV YN +++ LC E+ +EA +LL EM ++ D+ ++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + C V+ + L+ +M MPD TY V+ + G D A + +SM G
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-II 309
P+ +Y++++ GLC G+ +A + M+ +G PP T L N L G ++ I
Sbjct: 423 KPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 310 EILADKMERSTS 321
E+L + S
Sbjct: 482 ELLKQMLVNGCS 493
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 6/296 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+I + L+ LC+ + H+ ++H TP ++ Y+ ++ G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ + M +++ +N++L+ +C A EA +L EM D +++I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + V +L+ M + +P+V TY +I CK ++EA LL M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY +L C A L+++M ++ P+ T+N ++ L + G ++A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSS 291
E+ + M G P + +YS ++ GL K GK EEA + +MV++GI P YSS
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 38/351 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ LC R + A + D + P Y +++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ + M + C +D N +L A+C+ G +DEA G+LR++ G E D SY+ +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V ++D M R + PN+ T+N +I LC+N E +++L +M E G PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN VLK L R+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M G P V TY+ +++G C K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-KEG 405
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
++EA + M G P + + ++ L G ++D E+++ +++
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 6/298 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FG + I + +L LC K + D + + P + T++ L+ L G
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
++ +M E C DI + ++++ +CK G+++ A+ +L M S G +P+ Y+ +
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C A +L M + + + T+N ++ C+N V+ +LL++M+ G P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y ++ C ++ A+ L+ M+ P+ +Y +VLK L GR+ A E+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M ++G P+ T++ +++ LC KKG +E+A + + M+ G P YS+ ++ L
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLC-KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P + +++ CK + A + + P +Y+I+++GL G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +M+++ CP + + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + +V + Q+ D + +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E + A+ M MP+ TY M++K L G A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 240 EVWESMEKRG 249
E+ + RG
Sbjct: 622 ELLSELCSRG 631
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 39/245 (15%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++A+N+++ C+AG + R ++ P+A+++ + C I VLD
Sbjct: 79 VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M P Y+ I+ C++ + ++L+ M +G D + N +L C++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLK------------------------------- 227
V+ A+ L+ ++ D +YN VLK
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 228 ----LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
L R G F+R EV M + G P + Y+ ++ G+C K+G LE A + M
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPS 314
Query: 284 EGIPP 288
G+ P
Sbjct: 315 YGLKP 319
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P+ + L++ LCK+ V+ A + + +P + +YS ++ GLG G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+ + + + ++S+ A+ + G +++ M ++ DA Y+
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M +PN TY +I+ L +EA +LL E+ RG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Query: 180 A 180
A
Sbjct: 632 A 632
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 4/310 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M I P I + +++ LCK K + K + P TY IL+ GL G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L EM + VD++ +++L+ C G +D + EM G P+ YS
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ VL +M + P+V+TY C+I LCK+ + +A L D M E+G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C + A ++ M ++ + +YN ++ L G+ D A
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 240 EVWESMEKRGFY--PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
+++ S+ + G Y P V T++ ++ GLC K+G+L++A + ++ M++ G T +L
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLC-KEGRLDKAVEIYDTMIERGSFGNLFTCHILI 299
Query: 298 NRLVGLGFLD 307
+ G +D
Sbjct: 300 GEYIKSGIID 309
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 44/349 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M E GI+P +Y ++ LCK + A FD K E P+ TY++L+ GL G
Sbjct: 141 MTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE-EPSTVTYNVLINGLCKEG 199
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG--AEPDAFS 116
+ +A K+F+ MLE+ ++++++N+L+ +C G +DEA + + G EPD +
Sbjct: 200 CIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVIT 259
Query: 117 YSIFIHAFCEANDIHSVFRVLDSM-----------------------------------K 141
++ I C+ + + D+M
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVH 319
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ LVP+ TY+ +I CK + A L M G +P + YN ++A C + +
Sbjct: 320 KLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLE 379
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A RL M + N PD ++N+++ ++ G A E+ M++ G P TYS +
Sbjct: 380 QARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFI 439
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
+ L K G++EEA F+ M+ GI P + + L + G G D IE
Sbjct: 440 NRL-SKLGQMEEAKGAFDSMIASGITPDNHVYDSL---IKGFGLNDEIE 484
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 4/282 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + +Y+ ++ GL L +A L EM C + + L++ +CK G ++EA +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM+ G E D YS I FC + + D M + PNV Y+C+I CK
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
EA +L M ERG PD ++Y ++ C AL L MT++ P T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN+++ L + G A +++E+M ++G V +Y+ ++ GLC GKL+EA K F +
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC-NNGKLDEAMKLFSSL 246
Query: 282 VDEG--IPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERST 320
+++G + P T + L G LD +EI +ER +
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGS 288
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 4/287 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G++ + L+ C + + FD + +P V YS L+ G G EA
Sbjct: 75 GLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREA 134
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ M ER D+ + ++ +CK G +A + M G EP +Y++ I+
Sbjct: 135 TAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLING 194
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--AN 181
C+ I F++ ++M V +YN +I LC N K++EA +L ++E G
Sbjct: 195 LCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVE 254
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++N ++ C ++ A+ + M + + T ++++ ++ G D+A E+
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
W+ + K G PS +TYSVM+ G CK L A F M G+ P
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMH-MLNFAKGLFSRMKISGLSP 360
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 4/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDV 57
M+E G + + + L+ LC + A + F + + P V T++ +++GL
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE 270
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G L +A +++D M+ER ++ + L+ K+G ID+A + + + +G P + +Y
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTY 330
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S+ I FC+ + ++ + MK L P +F YN ++ LCK +E+A +L EM E
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
PD S+N ++ +++ A L+ M + + PD +TY+ + L ++G+ +
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEE 450
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
A ++SM G P Y ++ G ++EE M D G+
Sbjct: 451 AKGAFDSMIASGITPDNHVYDSLIKGF-GLNDEIEEVINLLRQMADMGV 498
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M+ I PD SY+ I+ C+ + +L M+ + PN FTY ++ LCK +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
VEEA +LL EM +G D Y+ +++ C + ++ L M ++ + P+ Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ + G + AT V +M +RG P V TY+ M+ GLC K G+ +A F++M ++
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLC-KDGRARKALDLFDLMTEK 179
Query: 285 GIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMERS 319
G P + T +L N L G + D +I +E+
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 147/282 (52%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKL 66
P + L+ A CK V A + F+ + + P V TY++L++G G L EA
Sbjct: 204 PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++ C D+++HN +L ++C G +A +L M G P +++I I+ C+
Sbjct: 264 LKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQ 323
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ VL+ M ++ PN ++N +I+ C + ++ A + L+ M+ RG PD +
Sbjct: 324 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVT 383
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L C +V+ A+ ++++++ + P +YN V+ L++VG+ + A E+ E M
Sbjct: 384 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 443
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+G P + T + +V GL ++GK+ EA K+F + GI P
Sbjct: 444 YKGLKPDLITCTSVVGGL-SREGKVHEAIKFFHYLKGFGIKP 484
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 7/285 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L++A CK ++ A + D+ P TY ++ L D G+L +A ++ D L+ KC
Sbjct: 145 LINAYCKSGEIEEALRVLDHT--SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKC 202
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D++ L++A CK + +A + EMR G +PD +Y++ I FC+ +
Sbjct: 203 YPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAII 262
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
L + Y +V ++N I+R LC + +A +LL M+ +G P ++N ++ + C
Sbjct: 263 FLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLC 322
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ + AL ++ M K P+ ++N +++ DRA E E M RG YP +
Sbjct: 323 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIV 382
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
TY++++ LC K GK+++A + +G P Y++ ++ L
Sbjct: 383 TYNILLTALC-KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 426
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V + L+R +G A ++ + E +D ++N L+ A CK+G I+EA
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA--- 158
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR + P+A +Y + + C+ + +VLD + P+V T +I CK
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V +A +L +EM +G PD +YN ++ C ++ A+ + ++ D +
Sbjct: 219 ESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVIS 278
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+NM+L+ L GR+ A ++ +M ++G +PSV T++++++ LC +KG L +A EMM
Sbjct: 279 HNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLC-QKGLLGKALNVLEMM 337
Query: 282 VDEGIPPYSSTVEML 296
G P S + L
Sbjct: 338 PKHGHTPNSRSFNPL 352
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL E + + M + D++A +L+ CK G A ++ + GA DA SY
Sbjct: 83 GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I+A+C++ +I RVLD ++ PN TY+ ++ LC K+++A Q+LD ++
Sbjct: 143 NVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQ 199
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
PD + ++ C + V A++L M + PD TYN+++K + GR D
Sbjct: 200 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + + G V ++++++ LC G+ +A K M+ +G P T +L
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLC-SGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318
Query: 298 NRLVGLGFL 306
N L G L
Sbjct: 319 NFLCQKGLL 327
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + KH TP ++++ L++G +
Sbjct: 302 MLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG 361
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N LL A+CK G +D+A +L ++ S G P SY+
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 421
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + +L+ M L P++ T ++ L + KV EA + + G
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG 481
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + YN+I+ C + ++A+ + M P +Y ++K + G + A+
Sbjct: 482 IKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEAS 541
Query: 240 EVWESMEKRGF 250
++ + RG
Sbjct: 542 KLSNELYSRGL 552
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 2/294 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
+G + + + +L +LC A + + P+V T++IL+ L G L
Sbjct: 269 SYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLG 328
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A + + M + + + N L++ C ID A L M S G PD +Y+I +
Sbjct: 329 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILL 388
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A C+ + +L + P++ +YN +I L K K E A +LL+EM +G
Sbjct: 389 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 448
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD + +++ +V+ A++ + + P+ YN ++ L + + A +
Sbjct: 449 PDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDF 508
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
M G P+ ++Y+ ++ G+ +G EEA K + G+ S V++
Sbjct: 509 LVDMVANGCKPTEASYTTLIKGI-TYEGLAEEASKLSNELYSRGLVKKSLIVKV 561
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Query: 91 KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
+ G ++E L M + G PD + + I FC+ + R++ ++ V +
Sbjct: 81 RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+YN +I CK+ ++EEA ++LD P+ +Y+A+L CDR ++ A++++ R
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ PD T +++ + +A +++ M +G P V TY+V++ G C K+G+
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC-KEGR 256
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEM-LRNRLVGLGFLDIIEILADKMERS 319
L+EA + + + G + M LR+ G ++D +++LA + +
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 39/194 (20%)
Query: 158 KLCKNEKVEEAYQLLDEMIERGANP----------------------------------- 182
+L +N ++EE + L+ M +G P
Sbjct: 78 RLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVI 137
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D SYN ++ +C E+ ALR++ + V P+ TY+ VL L G+ +A +V
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVL 194
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ + YP V T +V++ CK+ G + +A K F M +G P T +L
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESG-VGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253
Query: 303 LGFLDIIEILADKM 316
G LD I K+
Sbjct: 254 EGRLDEAIIFLKKL 267
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 36/328 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ G +P L+ LC + A FD E F P V TY L+ GL VG
Sbjct: 106 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A +L M + C D++ + S+++++CK + EA + +M G PD F+Y+
Sbjct: 166 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 225
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HA C + V +L+ M ++P+V ++ ++ LCK KV EA++++D MI+RG
Sbjct: 226 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 285
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL----------- 228
PD +Y ++ HC ++E++ A+++ M ++ PD +Y ++
Sbjct: 286 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSL 345
Query: 229 -----------------LVRVGR------FDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
V V R F++ + M P+V +S +V LC
Sbjct: 346 QEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALC 405
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTV 293
K+GK+ EA +MM+ G+ P + V
Sbjct: 406 -KEGKVMEAHDVVDMMIKRGVEPNAVKV 432
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 13/329 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL ++ K KH P V T +IL+ + + A +
Sbjct: 43 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+ D +L+ +C G I EA + +M G +P+ +Y I+ C+
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + R+L SM++ N P+V Y II LCK+ +V EA+ L +M+ +G +PD ++
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C+ E L+ +M ++PD ++ V+ L + G+ A E+ + M
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTVEMLRNRLVGLG 304
+RG P V TY+ ++ G C + +++EA K F+MMV +G P S T + + G G
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQS-EMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGG 341
Query: 305 FLDIIEILADKMERSTSCTIQELANAMRG 333
+ + E++ ++E +A++G
Sbjct: 342 LVSLQEVIG---------LVKETPDAVKG 361
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 34/263 (12%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ +L P I+ LL ++ K + + +M S G P+ ++ +I
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++FC N + F VL + + P+ T+ +IR LC K+ EA L D+MI+ G
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C + A+RL+ M + N PD Y ++ L + + A
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++ M +G P + TY+ +VH LC
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265
Query: 267 -KKGKLEEACKYFEMMVDEGIPP 288
K+GK+ EA + +MM+ G+ P
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEP 288
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 5/233 (2%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
ML P + N+ +D+A + + P ++ + + +
Sbjct: 1 MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+V + M + + PNV+T N +I C +V A+ +L ++++ G PD ++
Sbjct: 61 YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C ++ AL L +M E P+ TY ++ L +VG A + SME+
Sbjct: 121 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
P V Y+ ++ LCK + ++ EA F MV +GI P Y+S V L N
Sbjct: 181 CQPDVVIYTSIIDSLCKDR-QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 232
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+++A + ++ P + +L + L L T+M V P+ +T N+
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ + R A V + K G P +T++ ++ GLC + GK+ EA F+ M+DE
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVE-GKIGEALHLFDKMIDE 144
Query: 285 GIPPYSSTVEMLRNRLVGLG 304
G P T L N L +G
Sbjct: 145 GFQPNVVTYGTLINGLCKVG 164
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 168/332 (50%), Gaps = 11/332 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P++ + L++ C +K A + + + P V T++IL+ GL GE
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGE 279
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + M+++ +++ + SL++ +++A + + G P+ SYS+
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + ++ M N+ PN TY+ +I LCK+ ++ + + L+DE+ RG
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN++L C +V+ A+ L+T+M E + PD TY ++ L + GR A
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML--- 296
+++ + +G+ ++ Y+VM++GLC K+G +EA M D G P + T E L
Sbjct: 460 RIYQDLLCKGYPLNIRMYTVMINGLC-KEGFFDEALSLLSQMEDNGCMPDAVTYETLISA 518
Query: 297 --RNRLVGLGFLDIIEILADKMERSTSCTIQE 326
+N G +++L + + R + C+ +E
Sbjct: 519 LFKNNKNG----KAVKLLREMIARESDCSGKE 546
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 167/333 (50%), Gaps = 7/333 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ + L++ + A K + P T + L+RGL G++ EA
Sbjct: 83 GIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEA 142
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYSIFIH 122
D ++ ++ +D +++ +L+ +CK+G A +LR++ + PD Y+ I
Sbjct: 143 LNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIID 202
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+FC+ + + + M + PNV T+N +I C +++EA LL+EM NP
Sbjct: 203 SFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNP 262
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +++N ++ C EV A +++ M K+ V P+ TY ++ V ++A V+
Sbjct: 263 NVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVF 322
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
++ RG P+V +YSVM++GLCK K ++EA K F+ M + + P + T L + L
Sbjct: 323 NTISLRGVTPNVHSYSVMINGLCKNK-MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCK 381
Query: 303 LGFL----DIIEILADKMERSTSCTIQELANAM 331
G + D+I+ + ++ + + T L N +
Sbjct: 382 SGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 9/305 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P ++ LL LC VK A F D+ + F +Y L+ GL GE
Sbjct: 114 ILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGE 173
Query: 60 LSEA----RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
A RK+ +L R D++ + +++++ CK + +A+ + EM P+
Sbjct: 174 TRAALQLLRKIEGLLLVRP---DVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+++ I+ FC + +L+ M N+ PNV+T+N +I LCK +V++A +L M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
I++G P+ +Y +++ + EVN A + ++ V P+ H+Y++++ L +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A ++++ M + P+ TYS ++ GLC K G++ + + + + G P T
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLC-KSGRISDVWDLIDEINNRGQPANIITYNS 409
Query: 296 LRNRL 300
L N L
Sbjct: 410 LLNGL 414
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
I N +L ++ K + A ++M G +P+ F+++I I+ F ++ F ++
Sbjct: 53 IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+ + P+ T N ++R LC N KV+EA D +I + + D+ SY ++ C
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172
Query: 199 EVNMALRLI------------------------------------TRMTKENVMPDRHTY 222
E AL+L+ + M + + P+ T+
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ VG+ A + M P+V T+++++ GLC K+G++++A +M+
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLC-KEGEVKKATSVLSVMI 291
Query: 283 DEGIPP 288
+G+ P
Sbjct: 292 KQGVEP 297
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
N P +F +N I+ L K + A +M +G P+ +++N ++ ++N A
Sbjct: 48 NHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFA 107
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++ ++ K PD T N +L+ L G+ A + + ++ F+ +Y +++G
Sbjct: 108 FSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLING 167
Query: 264 LCK 266
LCK
Sbjct: 168 LCK 170
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 161/333 (48%), Gaps = 40/333 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+E P++ D++ LL +LC+ + A F + +P+V T +IL+ G ++ L
Sbjct: 29 MLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI--QCSPSVITLNILINGFCELQLL 86
Query: 61 SEARKLFDEM--------------------------------LERK--CPVDILAHNSLL 86
+A +LF EM LE C D++A S+
Sbjct: 87 DKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVA 146
Query: 87 EAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
CKA +DEA+ +L +M A+PD ++++ IH FC+A + + +L+++
Sbjct: 147 RGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGC 206
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--ANPDEWSYNAILAYHCDRAEVNMA 203
VPN TY +I CK+ + EA QL + R A P+ ++NA+++ C + A
Sbjct: 207 VPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHA 266
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L+ +M ++ D TY ++ L + GR + V+E M + G PSV TY+ +VH
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C K G L++A + MV +GIPP +T +L
Sbjct: 327 HC-KAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 149/302 (49%), Gaps = 5/302 (1%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+ + + CK + V A+Q + K P + +++++ G G + EA ++
Sbjct: 139 VIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEML 198
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSYSIFIHAFC 125
+ ++ C + + + +L++ CK+GN+ EA + + + R AEP+ +++ I C
Sbjct: 199 ETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLC 258
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A+ + F ++ MK +L + FTY ++ LCK + E ++ +EM+ G NP
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ HC + A ++I M + + PD TY ++L+ L G+ ATE +E +
Sbjct: 319 TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ P YS +V G C K ++EA KY+ M+D + P +T ++L L G
Sbjct: 379 LRERCPPCAVVYSALVRGCC-KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Query: 306 LD 307
D
Sbjct: 438 TD 439
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 8/242 (3%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P T+S+L+ GL G L EA + +++MLER C ++ N LL ++C+AG +D+A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLC 160
R I P + +I I+ FCE + + M K + LVP TY II+ C
Sbjct: 61 F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT-KENVMPDR 219
K +++++A QLL+E + D + ++ C V+ A +L+ M K++ PD
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+N+++ + GR A E+ E++ G P+ TY+ ++ G C K G L EA + F+
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFC-KSGNLSEALQLFK 234
Query: 280 MM 281
++
Sbjct: 235 VL 236
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDV 57
+V G P+ L+ CK ++ A Q F + H P V T++ L+ GL
Sbjct: 201 LVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKA 260
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L A +L +M R D + +L++ +CK G E + EM G P +Y
Sbjct: 261 DRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTY 320
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +HA C+A + +V+ SM + P+V TY ++ L +N KV A + ++++
Sbjct: 321 TTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILR 380
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
P Y+A++ C A V+ A++ M + PD T +++++L + GR D
Sbjct: 381 ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 157/299 (52%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+++G+ P +Y + LLH LC ++ A +F D H P + TY+IL G +G
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A K+ ML D++ + L+ C+ GNI+E+ + +M S G + +Y++
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C++ I +L M+ L P++ TY+ +I LCK VEEA +L +EM +
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + +AI++ ++ ++ A +TK +V + YN+++ ++G A
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ + ++G P++ T++ +++G C KKGKL EA K + + G+ P S T L N
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFC-KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 593
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 151/299 (50%), Gaps = 6/299 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P+ + ++ L ++ + A +FD+ K + + Y+I++ G +G + EA
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ + +++E+ I+ NSL+ CK G + EA +L ++ G P + +Y+ ++ +
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
CE D+HS+F +L M+ + P TY +++ LCK ++ E+ QLL M RG PD+
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ C ++ A +L +M + ++ P TYN+++ L G A + +
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEMLRNR 299
++ + + Y+ ++ C KG ++ A +F MV+ G I YS+ + L R
Sbjct: 716 LQDQSIRLTKVAYTTIIKAHC-AKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKR 773
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 143/276 (51%), Gaps = 2/276 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ + Y L+ LC++ ++ A F + EF P+V +++ L+ G +G + A
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F M++ D+ ++N LL +C AG+++EA +M + G EPD +Y+I +
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F I ++V+ M L P++ TY +I C+ +EE+++L ++M+ +G
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L+ C ++ A+ L+ M + PD TY++++ L + G + A E++E
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
M + YP+ S ++ GL +KG + EA YF+
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLF-EKGAISEAQMYFD 504
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 37/289 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
++E GI P+I + L++ CK+ + A + D K H PT TY+ L+ G + G+
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + EM + + + +++ +CK G + E+ +L+ M + G PD +Y+
Sbjct: 601 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 660
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +FC+A+D+ F++ + M +++L P+ TYN +I LC +++A +LL + ++
Sbjct: 661 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 720
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y I+ HC + +V AL +M
Sbjct: 721 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMV---------------------------- 752
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+RGF S+ YS +++ LCK+ + +A +F MM+ GIPP
Sbjct: 753 -------ERGFEVSIRDYSAVINRLCKRN-LITDAKFFFCMMLTHGIPP 793
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 10/311 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-----FTPTVKTYSILVRGLG 55
M+ G+K SI LL +LCK + A HE P + TYS+L+ GL
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILL----HEMEVIGLKPDLLTYSVLIHGLC 456
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
G + EA +L++EM ++ + ++++ + + G I EA + +
Sbjct: 457 KRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEII 516
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y+I I + + +I R + + P + T+N +I CK K+ EA +LLD +
Sbjct: 517 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 576
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
G P +Y ++ +C+ +++ ++ M + + P + TY +V+K L + GR
Sbjct: 577 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 636
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ ++ + M RG +P TY+ ++ CK L++A + M+ + P T +
Sbjct: 637 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAH-DLQKAFQLHNQMLQHSLQPSPVTYNV 695
Query: 296 LRNRLVGLGFL 306
L N L G L
Sbjct: 696 LINGLCVYGNL 706
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 36/289 (12%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+++E+ P + + L++ +C+ + +A LRE P S++ + FC
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE------------------ 167
+ + M +Y L+P+V++YN ++ LC +EE
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341
Query: 168 -----------------AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
A++++ M+ G NPD +Y ++ HC + + +L +M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + TY ++L L + GR D A + ME G P + TYSV++HGLC K+G
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLC-KRGA 460
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+EEA + +E M + I P S + + L G + ++ D + +S
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 509
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
V I +NSLL + + D + E+++ G + ++ I I C + +
Sbjct: 201 VSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF 257
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
L P+V ++N ++ CK V+ A MI+ G PD +SYN +L C
Sbjct: 258 LRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCV 317
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ AL M V PD TYN++ +G A +V + M G P + T
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
Y++++ G C + G +EE+ K E M+ +G+ T +L + L G +D IL +M
Sbjct: 378 YTILICGHC-QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM 436
Query: 317 E 317
E
Sbjct: 437 E 437
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFD 68
+ +DQ+L +L + + A FD ++E F + ++ I+ + G+ E R++ +
Sbjct: 81 HQVDQILLSL-RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLN 139
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
+M+E + + SL E +C + + + ++ +M + A+ A
Sbjct: 140 QMVEEEGSG---SAPSLCELLCNSFRDWDLNNVVWDMLAC--------------AYSRAE 182
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+H VL MK NL ++ TYN ++ L + + + Y +E+ G +E++
Sbjct: 183 MVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVY---NEIKASGVPQNEYTNP 239
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ C ++ + A+ + E P ++N ++ ++G D A + M K
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN--RLVGL 303
G P V +Y++++HGLC G +EEA ++ M + G+ P T +L N R++GL
Sbjct: 300 GLLPDVYSYNILLHGLC-VAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 159/304 (52%), Gaps = 2/304 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P L++ LC ++ A + F+ A+ + P + Y+ LV+GL G + A
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EM+E C DI +N ++ +CK GNI +A ++ + G PD F+++ I
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + S ++++ M Y + P+V TYN ++ LCK K +E + +EMI +G P+
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C ++ A +I RM ++ ++PD ++N ++ R G D A +++
Sbjct: 525 AITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQ 584
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++++G+ + T+++++ G K ++ A K F M+ +G P T +L + L
Sbjct: 585 KLDEKGYSATADTFNILI-GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKA 643
Query: 304 GFLD 307
+D
Sbjct: 644 ANVD 647
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 148/292 (50%), Gaps = 1/292 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ + + + + LC+ ++ A + P V TY+ L+RGL ++ EA
Sbjct: 241 GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAA 300
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ M+ + C D +N++++ CK+G + EA +L++ G PD +Y I+
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C DI + + + +L P++ YN +++ LC+ + A Q+++EM+E G +PD
Sbjct: 361 CAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI 420
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
W+YN I+ C ++ A ++ + +PD T+N ++ + + D A ++ E
Sbjct: 421 WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M G P V TY+ +++GLC K GK +E + FE M+ +G P + T +L
Sbjct: 481 MWTYGIAPDVITYNSVLNGLC-KAGKAKEVNETFEEMILKGCRPNAITYNIL 531
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 159/329 (48%), Gaps = 2/329 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + + L+ LCK V+ A Q+ ++ P TY+ ++ G G L EA
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L + + + D + + SL+ +C G+I+ A + E ++ +PD Y+ +
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C I +V++ M P+++TYN II LCK + +A ++++ I +G PD
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++N ++ +C R +++ AL+L+ RM + PD TYN VL L + G+ E +E
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M +G P+ TY++++ CK +LEEA M +G+ P + + L + G
Sbjct: 516 MILKGCRPNAITYNILIENFCKIN-QLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG 574
Query: 305 FLDIIEILADKMERSTSCTIQELANAMRG 333
LD +L K++ + N + G
Sbjct: 575 DLDGAYLLFQKLDEKGYSATADTFNILIG 603
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE G P I+ + +++ LCK ++ A ++A + P V T++ L+ G +
Sbjct: 411 MVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLK 470
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L + M D++ +NS+L +CKAG E + EM G P+A +Y+I
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 530
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N + V+ M + LVP+ ++N +I C+N ++ AY L ++ E+G
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG 590
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++N ++ + + + MA ++ M + PD +TY +++ L + DRA
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAY 650
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +GF PS++T+ M++ L ++ EA +MV G+ P
Sbjct: 651 AHLAEMISKGFVPSMATFGRMLN-LLAMNHRVSEAVAIIHIMVRMGVVP 698
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
Query: 29 AHQFFDNAKHEFT--------PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDIL 80
AH NA+H F P V T++ ++ L G++ E+ L ++L+R +
Sbjct: 188 AHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKF 247
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
N + +C+ G ++EA ++ M + A PD +Y+ + C+ + + + L M
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALVERMGAYVA-PDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+P+ FTYN II CK+ ++EA +LL + + +G PD +Y +++ C ++
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
AL L +++ PD YN ++K L R G A +V M + G +P + TY+++
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++GLC K G + +A + +G P
Sbjct: 427 INGLC-KMGNISDAAVVMNDAIVKGYLP 453
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + L+ CKR + A Q + + P V TY+ ++ GL G+ E
Sbjct: 450 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEV 509
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F+EM+ + C + + +N L+E CK ++EA G++ M G PDA S++ IH
Sbjct: 510 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHG 569
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC D+ + + + T+N +I ++ A ++ EMI +G PD
Sbjct: 570 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y ++ C A V+ A + M + +P T+ +L LL R A +
Sbjct: 630 LYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIH 689
Query: 244 SMEKRGFYPSV 254
M + G P V
Sbjct: 690 IMVRMGVVPEV 700
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 13/287 (4%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y ++ G L A F+ M CP A+N++++A+ A D+AH + M
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
+ G PDA ++++ + +FC H R+L S+ Y ++R L +
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A L DEM+ R PD ++N +L C + +V + L+ ++ K + ++ T N+ +
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253
Query: 227 KLLVRVGRFDRATEVWESMEKRGFY--PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L GR + A + E M G Y P V TY+ ++ GLCK K++EA +Y M+++
Sbjct: 254 RGLCEDGRLEEAVALVERM---GAYVAPDVVTYNTLMRGLCKDS-KVQEAAQYLGRMMNQ 309
Query: 285 GIPPYSSTVEMLRNRLVGLGFL-DIIEILADKM------ERSTSCTI 324
G P T + + G L + E+L D + +R T C++
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
GI P + ++H +C + A F+ E P V T+++L+ L G++ EA
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L M++R D +N+L++ C G ID+A + M S G E DA SY++ I+
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + ++ M ++P V TYN ++ L + KV +A+ L EM P+
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ L + + P +N ++ L + + + A E++
Sbjct: 448 SCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G P+V TY+VM+HGLC K G+LE A F M ++G P T L
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLC-KSGQLENAKDLFLGMEEKGCAPNLVTFNTL 559
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 3/330 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IKP++ ++ +LCK + + F K +P V YS ++ G+ G A+
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
LF+EM++ +++ N L++A+CKAG ++EA+ +L+ M G PD F+Y+ I F
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C I + SM+ + + +YN +I CK+ ++ EA +L EM+ + P
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN +L +V A L M ++ P+ TYN++L L + A E++
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+E F PS+ ++ ++ GLCK + K+E A + F + EG+ P T ++ + L G
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKAR-KIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532
Query: 305 FLDIIEILADKM-ERSTSCTIQELANAMRG 333
L+ + L M E+ + + MRG
Sbjct: 533 QLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 8/295 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA---HQFFDNAKHEFTPTVKT----YSILVRG 53
MV G +P++ LL+ LC + +A H+ N F T+K Y ++
Sbjct: 188 MVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L G + + ++LF EM R D++A++S++ MC G + A G+ EM G P+
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++++ I A C+A + +L M + P+ FTYN +I C ++++A L
Sbjct: 308 VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFV 367
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M +G D SYN ++ +C + A +L M + +MP TYN +L L R G
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ A ++ M+ P TY++++ GLCK L EA + F + + P
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN-HLSEAMELFHYLENHDFQP 481
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ + L+ ALCK ++ A+ + +P TY+ L+ G G
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR LF M + D +++N L+ CK+G + EA + REM P +Y+
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + MK ++L P TYN ++ LCKN + EA +L +
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +N ++ C ++ +A L R++ E + P+ TY +++ L + G+ + A
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAK 538
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ ME++G P++ T++ ++ G C+ ++++ + + M ++ P +ST+ ++ +
Sbjct: 539 DLFLGMEEKGCAPNLVTFNTLMRGFCQND-EMQKVVELLQEMAEKDFSPDASTISIVVDL 597
Query: 300 L 300
L
Sbjct: 598 L 598
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 7/250 (2%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA +F+ +++ + I + N+LL A+ K + + + M IG PD + +I
Sbjct: 74 SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ +C N + VL M R PN T+ +++ LC ++ EA LL +M+ G
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN------VMPDRHTYNMVLKLLVRVGR 234
P+ +Y +L C +A++L M N + P+ Y ++ L + G
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
D+ E++ M+ RG P V YS ++HG+C G+ E A F MVDEG+ P T
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSIIHGMC-HTGRWEGAKGLFNEMVDEGVHPNVVTFN 312
Query: 295 MLRNRLVGLG 304
+L + L G
Sbjct: 313 VLIDALCKAG 322
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 131/267 (49%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M++ G P + + L+ C + A F + + + T +Y++L+ G G
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+KL+ EM+ ++ ++ +N+LL + + G + +A + EM+ P++ +Y+I
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ N + + ++ ++ P++ +NC+I LCK K+E A +L + + G
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C ++ A L M ++ P+ T+N +++ + +
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
E+ + M ++ F P ST S++V L K
Sbjct: 574 ELLQEMAEKDFSPDASTISIVVDLLSK 600
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 10/298 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQF--FDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
P L+ L + CK H+K + F F++ + TP + +++ L+ + + +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+ M D + N L+ C +D +L EM G P+ +++ +
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--- 181
C + I +L M R PNV TY ++ LC A +L +EM+
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232
Query: 182 ---PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ Y I+ C ++ L M + PD Y+ ++ + GR++ A
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M G +P+V T++V++ LC K GK+EEA ++M+ G P + T L
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALC-KAGKMEEANHLLKLMIQRGESPDTFTYNTL 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P + LL LCK H+ A + F + H+F P+++ ++ L+ GL ++ AR
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF+ + +++ + ++ +CK+G ++ A + M G P+ +++ + F
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ +++ V +L M + P+ T + ++ L K+EK E LL +G
Sbjct: 564 CQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ +PS L L+ LCK KH++ +F + + T + L+ GL G+
Sbjct: 421 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 480
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ EMLER P+D + +N+L+ C G ++ + EM G +PD ++Y+
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + ++ D K L+ N+ TY ++ CK ++E+ L +E++ +
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ YN I+ HC V AL+L+ M + ++P+ TY+ ++ + +G + A
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M K GF P+V Y+ ++ G C K G+++ A + M+ I P T ++ +
Sbjct: 661 HLIDEMRKEGFVPNVVCYTALIGGYC-KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 719
Query: 300 LVGLGFLDIIEILADKMERS 319
LG ++ L KM+ S
Sbjct: 720 YCKLGNMEKANNLLIKMKES 739
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 149/288 (51%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ + L+ C V+ + + K P + TY+ L+RGL +VG+
Sbjct: 491 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 550
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A KL+DE +I + ++E CKA I++ + E+ S E ++ Y+I
Sbjct: 551 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ ++ + ++L++MK ++PN TY+ +I +C VE+A L+DEM + G
Sbjct: 611 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 670
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y A++ +C +++ A M N+ P++ TY +++ ++G ++A
Sbjct: 671 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKAN 730
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ M++ G P V TY+V+ +G CK ++ A K + M EG+P
Sbjct: 731 NLLIKMKESGIVPDVVTYNVLTNGFCKAN-DMDNAFKVCDQMATEGLP 777
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI+P IY + LL LC + A + +D K + TY I++ G
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + LF+E+L +K ++ + +N +++A C+ GN+ A +L M+S G P+ +YS
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + ++D M++ VPNV Y +I CK +++ A EMI
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++++Y ++ +C + A L+ +M + ++PD TYN++ + D A
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 765
Query: 240 EVWESMEKRGFYPSVSTYSVMVHG 263
+V + M G TY+ +VHG
Sbjct: 766 KVCDQMATEGLPVDEITYTTLVHG 789
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 139/284 (48%), Gaps = 2/284 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ +++ALCK ++ A + F K +P V TY+ ++ GL G L A
Sbjct: 215 GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ++M + ++ + +L+ + K D+ + +L EM G P+ ++ I
Sbjct: 275 FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDG 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ +I ++ D M N+ P T +++ CK++++E A L+E++ G +
Sbjct: 335 YCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 394
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +++ + C + + A R M N P M++ L + G+ ATE+W
Sbjct: 395 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 454
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ ++G S T + ++HGLC GKL EA + + M++ G+P
Sbjct: 455 RLLEKGSPASKVTSNALIHGLC-GAGKLPEASRIVKEMLERGLP 497
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 6/285 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ L++ L K KV H + F P V ++ L+ G +G + A
Sbjct: 285 GVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGA 344
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG--AEPDAFSYSIFI 121
K+ D M+ + + SL++ CK+ I+ A L E+ S G PD YS+ +
Sbjct: 345 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN-CYSV-V 402
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ HS FR M N P+ ++ LCK+ K EA +L ++E+G+
Sbjct: 403 HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP 462
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ + NA++ C ++ A R++ M + + DR TYN ++ G+ + +
Sbjct: 463 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 522
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E M KRG P + TY+ ++ GLC GKL++A K ++ G+
Sbjct: 523 REEMTKRGIQPDIYTYNFLLRGLC-NVGKLDDAIKLWDEFKASGL 566
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 6/267 (2%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F+ A+ P++KT + + L E + ++F M E CP D+ + +++ A+CK
Sbjct: 174 FYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCK 232
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G ++ A + +M +G P+ +Y+ I+ C+ + + F + + M + PN+ T
Sbjct: 233 GGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKT 292
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I L K ++ +LDEMI G NP+ +N ++ +C + AL++ M
Sbjct: 293 YGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMI 352
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF--YPSVSTYSVMVHGLCKKKG 269
+N+ P T +++ + + + A E + G +P + YSV VH LCKK
Sbjct: 353 SKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD-NCYSV-VHWLCKKF- 409
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEML 296
+ A ++ +MM+ P + ML
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTML 436
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ L+ CK + A + + P TY++++ G +G + +A
Sbjct: 670 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 729
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M E D++ +N L CKA ++D A + +M + G D +Y+ +H
Sbjct: 730 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Query: 124 F 124
+
Sbjct: 790 W 790
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 158/305 (51%), Gaps = 5/305 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQ--FFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
KPS+ + L+ L + K + +A + + N + P ++ILV+ G+L A
Sbjct: 160 KPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESAL 219
Query: 65 KLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIH 122
++ EM + R+ +++ +++L++ +C G + EA + EM S PDA +YS+ I
Sbjct: 220 EVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIK 279
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC ++++ M+ PNVF Y+ ++ CK ++EEA ++ DEM G P
Sbjct: 280 GFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKP 339
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D Y ++ C ++ A+ L+ MT+ D T+N++LK L R GRFD A +
Sbjct: 340 DTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRML 399
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
E++ G Y + +Y ++++ LC+K G+LE++C +M+ G P+ +T L L
Sbjct: 400 ENLAYEGVYLNKGSYRIVLNFLCQK-GELEKSCALLGLMLSRGFVPHYATSNELLVCLCE 458
Query: 303 LGFLD 307
G +D
Sbjct: 459 AGMVD 463
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P++ L+ LC +K A + F+ +K + P TYS+L++G G+ ARK
Sbjct: 233 PNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARK 292
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ + M C ++ ++ L+ CK G ++EA + EM+S G +PD Y+ I+ FC
Sbjct: 293 IMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFC 352
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
I +L M + T+N +++ LC+ + +EA ++L+ + G ++
Sbjct: 353 GVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKG 412
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY +L + C + E+ + L+ M +P T N +L L G D A +
Sbjct: 413 SYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGL 472
Query: 246 EKRGFYPSVSTYSVMVHGLCKKK 268
+ GF P +++ ++ +C+++
Sbjct: 473 TQMGFTPEPKSWAHLIEYICRER 495
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 8/324 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
+VE G K + ++ + + K + A + F+ + F TYS L+ L
Sbjct: 47 LVETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTK 106
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSY 117
+ L +M C +L++ K+ + M ++ I E P +
Sbjct: 107 KFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAI 166
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
S ++ E+ I + L + + V PN +N +++ CK+ +E A +++ EM
Sbjct: 167 STCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMK 226
Query: 177 E-RGANPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGR 234
+ R + P+ +Y+ ++ C + A+ L M +K+ ++PD TY++++K G+
Sbjct: 227 KSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGK 286
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
DRA ++ E M G P+V YSV+++G CK+ G+LEEA + F+ M G+ P +
Sbjct: 287 ADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKE-GRLEEAKEVFDEMKSSGLKPDTVGYT 345
Query: 295 MLRNRLVGLGFLD-IIEILADKME 317
L N G+G +D +E+L + E
Sbjct: 346 TLINCFCGVGRIDEAMELLKEMTE 369
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P++++ L++ CK ++ A + FD K P Y+ L+ VG + EA
Sbjct: 301 GCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEA 360
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E KC D + N LL+ +C+ G DEA ML + G + SY I ++
Sbjct: 361 MELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNF 420
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ +L M VP+ T N ++ LC+ V+ A L + + G P+
Sbjct: 421 LCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPE 480
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKE 213
S+ ++ Y C ++ L+ + ++
Sbjct: 481 PKSWAHLIEYICRERKLLFVFELVDELVEK 510
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 145/278 (52%), Gaps = 6/278 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P ++ + LL LC ++ +++ H D+ + P V +YS ++ GL
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGG-DCPPDVVSYSTIIDGLFK 218
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EMLER D++ +N+++ A+CKA +D+A +L M G PD +
Sbjct: 219 EGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCIT 278
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + +L+ M + P+ TY ++ LCKN + EA ++LD MI
Sbjct: 279 YNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMI 338
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG P+ +Y+ +L + + + L+ M + + PDRH +++++ + D
Sbjct: 339 KRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVD 398
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
A V+ M ++ P V TY ++ GLC K G++++A
Sbjct: 399 VAMFVFSKMRQQRLTPDVVTYGTLIDGLC-KSGRVDDA 435
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILV-------------RG 53
I L++ L A+ + F A+ TPT+ TY IL+ G
Sbjct: 61 IRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAG 120
Query: 54 LGDVGE-----------------LSEARK------LFDEMLERKCPVDILAHNSLLEAMC 90
LG+V + +E R + M E C + ++N LL+ +C
Sbjct: 121 LGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLC 180
Query: 91 KAGNIDEAHGMLREMRSIGAE--PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
EA +L M G + PD SYS I + D + M ++P+
Sbjct: 181 HESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPD 240
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
V TYN I+ LCK + +++A +L+ M++ G PD +YN+I+ +C + A+ ++
Sbjct: 241 VVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILE 300
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M + V PD TY ++ L + GR A ++ +SM KRG P+V TYS ++HG K
Sbjct: 301 KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGY-ATK 359
Query: 269 GKLEEACKYFEMMVDEGIPP 288
G L E ++MV GI P
Sbjct: 360 GALVEMRDLLDLMVRNGIQP 379
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC-EANDIHSVFRVLDSMKRY 143
L+ C+AG +D L + G + ++ + + C E +++ VL M
Sbjct: 104 LIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTEL 163
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAYHCDRAEVN 201
P+VF+YN +++ LC + +EA +LL M + G + PD SY+ I+ + +
Sbjct: 164 GCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSD 223
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A M + ++PD TYN ++ L + D+A +V M K G P TY+ +V
Sbjct: 224 KAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIV 283
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
HG C G+ +EA E M +G+ P + T L + L
Sbjct: 284 HGYC-SSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYL 321
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P + + ++ ALCK + + A + K+ P TY+ +V G G+
Sbjct: 232 MLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQ 291
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + ++M D + + SL++ +CK G EA +L M G +P+ +YS
Sbjct: 292 SKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYST 351
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + +LD M R + P+ ++ +I K++ V+ A + +M ++
Sbjct: 352 LLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQR 411
Query: 180 ANPDEWSYNAILAYHCDRAEVNMAL 204
PD +Y ++ C V+ A+
Sbjct: 412 LTPDVVTYGTLIDGLCKSGRVDDAM 436
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P I ++ +CK H++VA++ + + P V Y+ +++GL
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L EM ++ CP+D + N L++ C+ G +D +L +M S G PD +Y+
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L SM PN +Y +++ LC + +A +L+ +MI++G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ + C + V A+ L+ +M PD +Y+ V+ L + G+ + A
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M +G P+ YS + L ++G++ + + F+ + D I
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACAL-SREGRVNKVIQMFDNIKDTTI 562
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
+ + +L+A+C++ V A A + +Y+ +++GL + +L DEM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
+ C +I+ N+L+ +C+ G + H +L +M G PD Y+ I C+ +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+L+ M Y L PNV YN +++ LC E+ +EA +LL EM ++ D+ ++N +
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + C V+ + L+ +M MPD TY V+ + G D A + +SM G
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-II 309
P+ +Y++++ GLC G+ +A + M+ +G PP T L N L G ++ I
Sbjct: 423 KPNTVSYTIVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 310 EILADKMERSTS 321
E+L + S
Sbjct: 482 ELLKQMLVNGCS 493
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 6/296 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+I + L+ LC+ + H+ ++H TP ++ Y+ ++ G+ G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ + M +++ +N++L+ +C A EA +L EM D +++I
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + V +L+ M + +P+V TY +I CK ++EA LL M G
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY +L C A L+++M ++ P+ T+N ++ L + G ++A
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSS 291
E+ + M G P + +YS ++ GL K GK EEA + +MV++GI P YSS
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 38/351 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ LC R + A + D + P Y +++ G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ + M + C +D N +L A+C+ G +DEA G+LR++ G E D SY+ +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V ++D M R + PN+ T+N +I LC+N E +++L +M E G PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C + +A ++ RM + P+ YN VLK L R+
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M G P V TY+ +++G C K+G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-KEG 405
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
++EA + M G P + + ++ L G ++D E+++ +++
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 6/298 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FG + I + +L LC K + D + + P + T++ L+ L G
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
++ +M E C DI + ++++ +CK G+++ A+ +L M S G +P+ Y+ +
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C A +L M + + + T+N ++ C+N V+ +LL++M+ G P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y ++ C ++ A+ L+ M+ P+ +Y +VLK L GR+ A E+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M ++G P+ T++ +++ LC KKG +E+A + + M+ G P YS+ ++ L
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLC-KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P + +++ CK + A + + P +Y+I+++GL G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L +M+++ CP + + N+L+ +CK G +++A +L++M G PD SYS
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ I L + +V + Q+ D + +
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E + A+ M MP+ TY M++K L G A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Query: 240 EVWESMEKRG 249
E+ + RG
Sbjct: 622 ELLSELCSRG 631
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P+ + L++ LCK+ V+ A + + +P + +YS ++ GLG G+
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 511
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+ + + + ++S+ A+ + G +++ M ++ DA Y+
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNA 571
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M +PN TY +I+ L +EA +LL E+ RG
Sbjct: 572 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Query: 180 A 180
A
Sbjct: 632 A 632
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 39/245 (15%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
++A+N+++ C+AG + R ++ P+A+++ + C I VLD
Sbjct: 79 VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M P Y+ I+ C++ + ++L+ M +G D + N +L C++
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLK------------------------------- 227
V+ A+ L+ ++ D +YN VLK
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 228 ----LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
L R G F+R EV M + G P + Y+ ++ G+C K+G LE A + M
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC-KEGHLEVANEILNRMPS 314
Query: 284 EGIPP 288
G+ P
Sbjct: 315 YGLKP 319
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ +PS L L+ LCK KH++ +F + + T + L+ GL G+
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ EMLER P+D + +N+L+ C G ++ + EM G +PD ++Y+
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + ++ D K L+ N+ TY ++ CK ++E+ L +E++ +
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ YN I+ HC V AL+L+ M + ++P+ TY+ ++ + +G + A
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M K GF P+V Y+ ++ G C K G+++ A + M+ I P T ++ +
Sbjct: 684 HLIDEMRKEGFVPNVVCYTALIGGYC-KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 742
Query: 300 LVGLGFLDIIEILADKMERS 319
LG ++ L KM+ S
Sbjct: 743 YCKLGNMEKANNLLIKMKES 762
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 149/288 (51%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ + L+ C V+ + + K P + TY+ L+RGL +VG+
Sbjct: 514 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 573
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A KL+DE +I + ++E CKA I++ + E+ S E ++ Y+I
Sbjct: 574 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ ++ + ++L++MK ++PN TY+ +I +C VE+A L+DEM + G
Sbjct: 634 IIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG 693
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y A++ +C +++ A M N+ P++ TY +++ ++G ++A
Sbjct: 694 FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKAN 753
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ M++ G P V TY+V+ +G CK ++ A K + M EG+P
Sbjct: 754 NLLIKMKESGIVPDVVTYNVLTNGFCKAN-DMDNAFKVCDQMATEGLP 800
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI+P IY + LL LC + A + +D K + TY I++ G
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + LF+E+L +K ++ + +N +++A C+ GN+ A +L M+S G P+ +YS
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + ++D M++ VPNV Y +I CK +++ A EMI
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++++Y ++ +C + A L+ +M + ++PD TYN++ + D A
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 788
Query: 240 EVWESMEKRGFYPSVSTYSVMVHG 263
+V + M G TY+ +VHG
Sbjct: 789 KVCDQMATEGLPVDEITYTTLVHG 812
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 139/284 (48%), Gaps = 2/284 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P ++ +++ALCK ++ A + F K +P V TY+ ++ GL G L A
Sbjct: 238 GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNA 297
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ++M + ++ + +L+ + K D+ + +L EM G P+ ++ I
Sbjct: 298 FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDG 357
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ +I ++ D M N+ P T +++ CK++++E A L+E++ G +
Sbjct: 358 YCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 417
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +++ + C + + A R M N P M++ L + G+ ATE+W
Sbjct: 418 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 477
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ ++G S T + ++HGLC GKL EA + + M++ G+P
Sbjct: 478 RLLEKGSPASKVTSNALIHGLC-GAGKLPEASRIVKEMLERGLP 520
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 6/285 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ L++ L K KV H + F P V ++ L+ G +G + A
Sbjct: 308 GVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGA 367
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--PDAFSYSIFI 121
K+ D M+ + + SL++ CK+ I+ A L E+ S G PD YS+ +
Sbjct: 368 LKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN-CYSV-V 425
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ HS FR M N P+ ++ LCK+ K EA +L ++E+G+
Sbjct: 426 HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP 485
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ + NA++ C ++ A R++ M + + DR TYN ++ G+ + +
Sbjct: 486 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 545
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E M KRG P + TY+ ++ GLC GKL++A K ++ G+
Sbjct: 546 REEMTKRGIQPDIYTYNFLLRGLC-NVGKLDDAIKLWDEFKASGL 589
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 6/267 (2%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F+ A+ P++KT + L+ L E + ++F M E CP D+ + +++ A+CK
Sbjct: 197 FYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCK 255
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G ++ A + +M +G P+ +Y+ I+ C+ + + F + + M + PN+ T
Sbjct: 256 GGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKT 315
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I L K ++ +LDEMI G NP+ +N ++ +C + AL++ M
Sbjct: 316 YGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMI 375
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF--YPSVSTYSVMVHGLCKKKG 269
+N+ P T +++ + + + A E + G +P + YSV VH LCKK
Sbjct: 376 SKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD-NCYSV-VHWLCKKF- 432
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEML 296
+ A ++ +MM+ P + ML
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTML 459
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ L+ CK + A + + P TY++++ G +G + +A
Sbjct: 693 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 752
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M E D++ +N L CKA ++D A + +M + G D +Y+ +H
Sbjct: 753 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Query: 124 F 124
+
Sbjct: 813 W 813
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 161/333 (48%), Gaps = 40/333 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+E P++ D++ LL +LC+ + A F + +P+V T +IL+ G ++ L
Sbjct: 29 MLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI--QCSPSVITLNILINGFCELQLL 86
Query: 61 SEARKLFDEM--------------------------------LERK--CPVDILAHNSLL 86
+A +LF EM LE C D++A S+
Sbjct: 87 DKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVA 146
Query: 87 EAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
CKA +DEA+ +L +M A+PD ++++ IH FC+A + + +L+++
Sbjct: 147 RGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGC 206
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--ANPDEWSYNAILAYHCDRAEVNMA 203
VPN TY +I CK+ + EA QL + R A P+ ++NA+++ C + A
Sbjct: 207 VPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHA 266
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L+ +M ++ D TY ++ L + GR + V+E M + G PSV TY+ +VH
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C K G L++A + MV +GIPP +T +L
Sbjct: 327 HC-KAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 149/302 (49%), Gaps = 5/302 (1%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+ + + CK + V A+Q + K P + +++++ G G + EA ++
Sbjct: 139 VIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEML 198
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSYSIFIHAFC 125
+ ++ C + + + +L++ CK+GN+ EA + + + R AEP+ +++ I C
Sbjct: 199 ETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLC 258
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A+ + F ++ MK +L + FTY ++ LCK + E ++ +EM+ G NP
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ HC + A ++I M + + PD TY ++L+ L G+ ATE +E +
Sbjct: 319 TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ P YS +V G C K ++EA KY+ M+D + P +T ++L L G
Sbjct: 379 LRERCPPCAVVYSALVRGCC-KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Query: 306 LD 307
D
Sbjct: 438 TD 439
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 8/242 (3%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P T+S+L+ GL G L EA + +++MLER C ++ N LL ++C+AG +D+A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLC 160
R I P + +I I+ FCE + + M K + LVP TY II+ C
Sbjct: 61 F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT-KENVMPDR 219
K +++++A QLL+E + D + ++ C V+ A +L+ M K++ PD
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+N+++ + GR A E+ E++ G P+ TY+ ++ G C K G L EA + F+
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFC-KSGNLSEALQLFK 234
Query: 280 MM 281
++
Sbjct: 235 VL 236
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDV 57
+V G P+ L+ CK ++ A Q F + H P V T++ L+ GL
Sbjct: 201 LVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKA 260
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L A +L +M R D + +L++ +CK G E + EM G P +Y
Sbjct: 261 DRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTY 320
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ +HA C+A + +V+ SM + P+V TY ++ L +N KV A + ++++
Sbjct: 321 TTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILR 380
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
P Y+A++ C A V+ A++ M + PD T +++++L + GR D
Sbjct: 381 ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 6/355 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ + P + + L++ C+ ++ A FD + + PT+ TY+ L+ GL GE
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A++L EM+ DI+ + L+ CK G++ A EM G E D+++Y+
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + D F + + M P++ YN ++ LCK +EEA +LL +M+ G
Sbjct: 485 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +I+ H + + + M + + P TY +++ GR +RA
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M+++G P+V TY+ +++GLCK + ++++A +F MV++GI P + +L N
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVR-RMDQAYNFFAEMVEKGIFPNKYSYTILINE 663
Query: 300 LVGLG----FLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+G L + + + D+ + SCT L + + R E+ L+S+
Sbjct: 664 NCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDSE 718
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M EFGIKP+I + LL + CK V+ + P TY++L+ GL GE
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 60 LSEARKLFDEMLERKCPVD-----------------------------------ILAHNS 84
+A+ L EML+ V + +NS
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+ +CK G + +A L +M + PD SY+ I+ +C ++ F + D ++
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L P + TYN ++ LC+ ++E A QL EMI G PD +Y ++ C ++MA
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M E + D + Y + +++G RA + E M +GF P + Y+V+V GL
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K G LEEA + + MV +G+ P
Sbjct: 525 C-KLGNLEEASELLQKMVSDGVIP 547
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ + ++ LCK + A Q D + P V +Y+ L+ G +G
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LFDE+ I+ +N+LL+ +C+ G ++ A + EM + G PD +Y+I
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ + D M L + + Y I K A+ L +EM+ +G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN ++ C + A L+ +M + V+PD TY ++ + GR +
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +G PSV TY+V++HG KG+LE A YF M ++GI P T L N
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHA-GKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 300 L 300
L
Sbjct: 629 L 629
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P + + +++L L + + A + + + PT+ TY+ L+ G+
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + L EM R C + + +N L+ + K G ++A G++ EM G + A++Y+
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + + + M P V TYN I LCK ++ +A Q L +M+
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ +C + A L + + P TYN +L L R G + A
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++ M G P + TY+++V+G C K G L A ++F+ M+ EG+
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSC-KMGSLSMAQEFFDEMLHEGL 475
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 140/309 (45%), Gaps = 36/309 (11%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
+VK +L+ + + +FD+M++ + D+ N +L + + +A +
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
R M G +P +Y+ + ++C+ + +L M+R PN TYN +I L K
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 163 EKVE-----------------------------------EAYQLLDEMIERGANPDEWSY 187
+ E EA L +EM+ +GA+P +Y
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N+ + C ++ A++ ++ M N++PD +YN ++ R+G +A +++ +
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+P++ TY+ ++ GLC ++G+LE A + M++EGI P T +L N +G L
Sbjct: 403 IYLFPTIVTYNTLLDGLC-RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 461
Query: 308 IIEILADKM 316
+ + D+M
Sbjct: 462 MAQEFFDEM 470
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 154/307 (50%), Gaps = 3/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+KP++Y L+H CK ++VA ++F + P + L+ G G
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA +F ML R D+ +++L+ + + G + A +L E G PD F+Y+
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ I F++ + M + + PN+ TYN +I LCK ++E A +L D + +G
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y I+ +C ++ A RL MT + V PD Y+ ++ + G ++A
Sbjct: 722 LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL 781
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ ++GF S S+ + ++ G CK GK+ EA + E MVD+ + P T +L +
Sbjct: 782 SLFLESVQKGF-ASTSSLNALMDGFCKS-GKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839
Query: 300 LVGLGFL 306
GFL
Sbjct: 840 HCKTGFL 846
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 146/285 (51%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ ++ L+ K+K A + P Y+ L+ G G+ EA
Sbjct: 301 GLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEA 360
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +EML R +++ +N+L++ +CK G++++A +L EM +G +PD +Y+ I
Sbjct: 361 FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEG 420
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + V +L MK+ NLVP +T II LC++ +E+A ++ + M+ G P+
Sbjct: 421 YLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPN 480
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ H A+R++ M K+ V PD YN V+ L + + + A +
Sbjct: 481 AVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLV 540
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +RG P+V TY ++HG C K G+++ A +YF+ M+ GI P
Sbjct: 541 EMIERGLKPNVYTYGALIHGYC-KSGEMQVADRYFKEMLGCGIAP 584
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 158/330 (47%), Gaps = 41/330 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ Y +++ LC+ ++ A + F+ P Y+ L++G G EA ++
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M ++ D+L +NS++ +CK+ ++EA L EM G +P+ ++Y IH +C+
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563
Query: 127 ANDIHSVFRVLDSMKRYNLVPN-----------------------------------VFT 151
+ ++ R M + PN V T
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y+ +I L +N K++ A +LL E +E+G PD ++YN+I++ C + + A +L M
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
++ + P+ TYN ++ L + G +RA E+++ + +G + TY+ ++ G C K G L
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYC-KSGNL 742
Query: 272 EEACKYFEMMVDEGIPP----YSSTVEMLR 297
+A + F+ M +G+PP YS+ ++ R
Sbjct: 743 SKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 2/288 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P + + ++ LCK + ++ A + + + P V TY L+ G GE+ A
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F EML + + +L++ CK G+ EA + R M PD +YS IH
Sbjct: 571 DRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHG 630
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ +L LVP+VFTYN II CK + +A+QL + M ++G +P+
Sbjct: 631 LLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ C E+ A L + + + + TY ++ + G +A +++
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
M +G P YS ++ G C+K+G E+A F V +G SS
Sbjct: 751 EMTLKGVPPDSFVYSALIDG-CRKEGNTEKALSLFLESVQKGFASTSS 797
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E + +Y L++A + + K + F+ + +P++ TY++++ GL GE
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L M ++ D+ ++ L++ K EA ML EM S G +P +Y+
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F D FRV + M + N+FTYN +++ +CK +E+A LL+EMI G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ + + L++ M K N++P +T M++ L R G + A+
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E M G P+ Y+ ++ G ++G+ +EA + ++M +G+ P
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHV-QEGRFQEAVRILKVMDKKGVQP 514
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+K +++ + L+ +CK ++ A + P +TY+ ++ G
Sbjct: 367 MLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQN 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S + L EM + ++ +C+ G+I++A + M S+G +P+A Y+
Sbjct: 427 TSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTT 486
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + R+L M + + P+V YN +I LCK+ K+EEA L EMIERG
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y A++ +C E+ +A R M + P+ ++ + G AT
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M R +P V TYS ++HGL + GKL+ A + +++G+ P
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLL-RNGKLQGAMELLSEFLEKGLVP 654
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GIKP + ++ K ++ +V + K PT T +++ GL G
Sbjct: 402 MIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+ M+ + + + +L++ + G EA +L+ M G +PD Y+
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + L M L PNV+TY +I CK+ +++ A + EM+ G
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG 581
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ A++ +C A + M +V PD TY+ ++ L+R G+ A
Sbjct: 582 IAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAM 641
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ ++G P V TY+ ++ G C K+G + +A + E M +GI P T L N
Sbjct: 642 ELLSEFLEKGLVPDVFTYNSIISGFC-KQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 300 LVGLG 304
L G
Sbjct: 701 LCKAG 705
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 36/333 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI P+I + L++ LCK ++ A + FD + TY+ ++ G G
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGN 741
Query: 60 LSEARKLFDEMLERKCPVDILAH----------------------------------NSL 85
LS+A +LFDEM + P D + N+L
Sbjct: 742 LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNAL 801
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
++ CK+G + EA+ +L +M +PD +Y+I I C+ + + M++ NL
Sbjct: 802 MDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNL 861
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+PN TY ++ + E + L DEMI + PD +++ ++ H + L+
Sbjct: 862 MPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLK 921
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M K+ ++ ++++ L R +V E +E++G S++T S +V
Sbjct: 922 LVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCF- 980
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
K GK++ A + + MV P S+ + L N
Sbjct: 981 HKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 29 AHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
A FF AK F + + L+ L +L + ++ MLE D+ + L+
Sbjct: 185 AVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLIN 244
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
A +AGN E +L EM G P +Y++ I C A ++ F + M + LV
Sbjct: 245 AHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVA 304
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE----------------------- 184
+VFTY+ +I K ++ EA +L+EM +G P
Sbjct: 305 DVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVK 364
Query: 185 ------------WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
++YNA++ C ++ A L+ M + PD TYN +++ ++
Sbjct: 365 EEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKE 424
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R ++ M+K P+ T ++++GLC + G +E+A + FE+MV G+ P
Sbjct: 425 QNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLC-RHGSIEDASRVFEIMVSLGVKP 479
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 1/214 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ +KP L+ CK +K A QFF D K P TY+ L+ G G
Sbjct: 821 MVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGR 880
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SE LFDEM+ + D + + +++A K G+ + ++ +M G +
Sbjct: 881 RSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV 940
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + V +VL+ ++ L ++ T + ++R K K++ A ++L M+
Sbjct: 941 LIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFK 1000
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
PD N ++ D + A + +M E
Sbjct: 1001 WVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1034
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 38/347 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +IY L+ +++ C+ A+ K + P T++ L++GL G++SEA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E C D++ +NS++ +C++G+ A +LR+M + D F+YS I +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---------------------- 161
C I + + M+ + +V TYN ++R LCK
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 162 -------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
K++EA +L EMI RG +P+ +YN ++ +C + ++ A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD T+ ++K V R D +V+ ++ KRG + TYS++V G C +
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QS 416
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILAD 314
GK++ A + F+ MV G+ P T +L + L G L+ +EI D
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E +K ++ ++ +LC+ + A F + + +V TY+ LVRGL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L +M+ R+ +++ N LL+ K G + EA+ + +EM + G P+ +Y+
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +LD M R P++ T+ +I+ C ++V++ ++ + +RG
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ +A L M V+PD TY ++L L G+ ++A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++K + Y+ ++ G+CK GK+E+A F + +G+ P T ++ +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANA 330
L G L IL KME CT L A
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 132/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + L+ C + + A+ D +++ +P + T++ L++G V
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + K+F + +R + + ++ L++ C++G I A + +EM S G PD +Y I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + + Y II +CK KVE+A+ L + +G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + ++ A L+ +M ++ P+ TYN +++ +R G +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ E M+ GF S+ +++ L
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 8/282 (2%)
Query: 30 HQFFDNAKHEFTPTVKTYSILVR-----GLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
FF + + +F+ ++ ++ R G+ D+ + +A LF EM+ + ++ +
Sbjct: 36 SSFFSSCERDFS-SISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSR 93
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
A+ + + +++ G + ++ +I I+ FC + VL + +
Sbjct: 94 FFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+ T+N +I+ L KV EA L+D M+E G PD +YN+I+ C + ++AL
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ +M + NV D TY+ ++ L R G D A +++ ME +G SV TY+ +V GL
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
C K GK + + MV I P T +L + V G L
Sbjct: 274 C-KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P +Y + +++ LCK K+ + F + + +P TY L+ G+ E
Sbjct: 290 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F +M R D++ +S++ ++GN+D+A ++ G PD Y+I I
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C I + + M + +V TYN I+ LCK + + EA +L +EM ERG PD
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ ++ HC + A+ L +M ++ + D TYN +L +VG D A E+W
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + P+ ++S++V+ LC KG L EA + ++ M+ + I P
Sbjct: 530 DMVSKEILPTPISFSILVNALC-SKGHLSEAFRVWDEMISKSIKP 573
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G + + +LH LCKRK + A + F+ + P T +IL+ G +G
Sbjct: 426 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGN 485
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF +M E++ +D++ +N+LL+ K G+ID A + +M S P S+SI
Sbjct: 486 LQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSI 545
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A C + FRV D M ++ P V N +I+ C++ + L++MI G
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE--NVMPDRHTYNMVLKLLVRVGRFDR 237
PD SYN ++ ++ A L+ +M ++ ++PD TYN +L R +
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V M +RG P STY+ +++G + L EA ++ + M+ G P
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSLINGFVSQD-NLTEAFRFHDEMLQRGFSP 715
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 142/282 (50%), Gaps = 4/282 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G S++DL L+ + + ++ A++ F + + +T ++ + L+ L +G + A
Sbjct: 152 GSNDSVFDL--LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELA 209
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ E+ V++ N ++ A+CK G +++ L E++ G PD +Y+ I A
Sbjct: 210 WRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISA 269
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F ++ +M P V+TYN +I LCK+ K E A ++ EM+ G +PD
Sbjct: 270 YSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++L C + + + + M +V+PD ++ ++ L R G D+A +
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
S+++ G P Y++++ G C +KG + EA M+ +G
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYC-RKGMISEAMNLRNEMLQQG 430
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E IK + + LL K + A + + D E PT ++SILV L G
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSEA +++DEM+ + ++ NS+++ C++GN + L +M S G PD SY+
Sbjct: 556 LSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNT 615
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ F + ++ F ++ M K+ LVP+VFTYN I+ C+ +++EA +L +MIE
Sbjct: 616 LIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIE 675
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
RG NPD +Y +++ + + A R M + PD
Sbjct: 676 RGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 152/334 (45%), Gaps = 39/334 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + ++ + ++ A +F++ K P Y+IL++G G +SEA
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EML++ C +D++ +N++L +CK + EA + EM G PD+++ +I I
Sbjct: 421 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGH 480
Query: 125 CEANDIHSVFRVLDSMKR---------YN--------------------------LVPNV 149
C+ ++ + + MK YN ++P
Sbjct: 481 CKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 540
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
+++ ++ LC + EA+++ DEMI + P N+++ +C + + +
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR--GFYPSVSTYSVMVHGLCKK 267
M E +PD +YN ++ V+ +A + + ME++ G P V TY+ ++HG C++
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+++EA M++ G+ P ST L N V
Sbjct: 661 N-QMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 125/289 (43%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH-VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P LL CK+ V+ + F D + P + +S ++ G
Sbjct: 321 MLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGN 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A F+ + E D + + L++ C+ G I EA + EM G D +Y+
Sbjct: 381 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNT 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C+ + ++ + M L P+ +T +I CK ++ A +L +M E+
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN +L +++ A + M + ++P ++++++ L G A
Sbjct: 501 IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAF 560
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
VW+ M + P+V + M+ G C + G + + E M+ EG P
Sbjct: 561 RVWDEMISKSIKPTVMICNSMIKGYC-RSGNASDGEIFLEKMISEGFVP 608
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 21/272 (7%)
Query: 33 FDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA 92
F N KH ILVR G LS+A+ M+ R + NSL+
Sbjct: 96 FPNFKHTSLSLSAMIHILVRS----GRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNC 151
Query: 93 GNID-----------------EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
G+ D EA+ +RS G + + I + + +R
Sbjct: 152 GSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWR 211
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+ + R + NV+T N ++ LCK+ K+E+ L E+ E+G PD +YN +++ +
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ + A L+ M + P +TYN V+ L + G+++RA EV+ M + G P +
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
TY ++ CKK +E + +M + +P
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV I P + + L++ C +K A E P + T+SILV G+
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGK 295
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ + +++ +D++ +NSL++ C I++A + M S G + SY+
Sbjct: 296 VKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTT 355
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + + M+ ++PNV TYN +I L K K+ +L+DEM +RG
Sbjct: 356 MINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG 415
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+IL C V+ A+ L+T + + + PD +TY +++K L + G+ + A
Sbjct: 416 QPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQ 475
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+V+E + +G+ V TY+VM+ G C KG + A M D G P + T E++
Sbjct: 476 KVFEDLLVKGYNLDVYTYTVMIQGFC-VKGLFDAALALLSKMEDNGCIPNAKTYEIV 531
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P +Y L+ A CK VK A K + V TY+ L+ G V E
Sbjct: 271 MILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKE 330
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A+ +FD M R ++ ++ +++ +CK +DEA + EMR P+ +Y+
Sbjct: 331 INKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNS 390
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + I V +++D M PN+ TYN I+ LCKN V++A LL + ++G
Sbjct: 391 LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y ++ C ++ A ++ + + D +TY ++++ G FD A
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ ME G P+ TY +++ L +K
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEK 538
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 144/280 (51%), Gaps = 1/280 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K F P T++ L++GL G + +A D+++ + +D +++ +L+ +CK G I
Sbjct: 133 KKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 192
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A +L+ + +P+A Y++ I C+A ++ F + M + P+ FT N +I
Sbjct: 193 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLI 252
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
C +++EA LL +MI NP ++++ ++ C +V A ++ K++++
Sbjct: 253 YGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII 312
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
D TYN ++ V ++A ++++SM RG +V +Y+ M++GLCK K ++EA
Sbjct: 313 LDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIK-MVDEAVN 371
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
FE M I P T L + L LG + + L D+M
Sbjct: 372 LFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM 411
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+ + L+ LC + H+ A F D + F +Y L+ GL VG ++ A
Sbjct: 135 GFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 194
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + + + + +N +++ MCKA +++A + +M + PD F+ + I+
Sbjct: 195 LQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYG 254
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + +L M N+ P ++T++ ++ CK KV+EA +L +++ D
Sbjct: 255 FCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILD 314
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ +C E+N A + M V+ + +Y ++ L ++ D A ++E
Sbjct: 315 VVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFE 374
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M R P+V TY+ ++ GL K GK+ K + M D G PP Y+S ++ L
Sbjct: 375 EMRCRKIIPNVVTYNSLIDGL-GKLGKISCVLKLVDEMHDRGQPPNIITYNSILDAL 430
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G+ ++ +++ LCK K V A F+ + + P V TY+ L+ GLG +G+
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S KL DEM +R P +I+ +NS+L+A+CK ++D+A +L ++ G PD ++Y++
Sbjct: 401 ISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTV 460
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I C++ + +V + + K YNL +V+TY +I+ C + A LL +M +
Sbjct: 461 LIKGLCQSGKLEDAQKVFEDLLVKGYNL--DVYTYTVMIQGFCVKGLFDAALALLSKMED 518
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
G P+ +Y ++ ++ E +MA +L+ M ++ ++
Sbjct: 519 NGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEK 560
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 1/234 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP + ++ ++ L S A L +M D N L+ + G +
Sbjct: 67 TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ ++ G +P+A +++ I C IH D + + +Y +I LC
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++ A QLL + + P+ YN I+ C VN A L ++M + + PD
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
T N ++ +G+ A + M P + T+S++V C K+GK++EA
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFC-KEGKVKEA 299
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 108 IGAEPDAFS-YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
IG P + S YS H E N++ S F L + N P + +N I+ L K +
Sbjct: 30 IGLFPSSISLYSQLHHHQDEENNLISSFNSL--LHHKNPTPPIIQFNKILSSLVKAKHHS 87
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A L +M G D +++N ++ +++ + ++ K+ P+ T+N ++
Sbjct: 88 TALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLI 147
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K L G +A + + +GF+ +Y +++GLC K G++ A + + + + +
Sbjct: 148 KGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC-KVGRITAALQLLKRVDGKLV 206
Query: 287 PPYSSTVEMLRNRL 300
P + M+ + +
Sbjct: 207 QPNAVMYNMIIDNM 220
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 152/287 (52%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G + + LL AL K + A Q FD +++P +++Y+ L+ + L
Sbjct: 288 MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNL 347
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++++EMLE+ D++ HN+++E + + EA M M++ G P+ ++Y++
Sbjct: 348 VEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTML 407
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M+ P+V TY C++ ++++ +L+EM ++G
Sbjct: 408 IRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGC 467
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK-LLVRVGRFDRAT 239
PD +YNA++ +R + A R+ +M K+ + P HTYNM++K V +
Sbjct: 468 PPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGC 527
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VWE M +RG P V++Y+V ++ + G+ EEA KY E M+++G+
Sbjct: 528 AVWEEMHQRGICPDVNSYTVFINRHI-RHGRPEEAYKYIEEMINKGM 573
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
M+E G+ P + + ++ L + + A + F+ K + P V TY++L+R G+
Sbjct: 357 MLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGK 416
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F+EM E KC D+ + LL A +D +L EM G PDA +Y+
Sbjct: 417 MDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNA 476
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKNEKVEEAYQLLDEMIER 178
I N R+ M + L P + TYN +++ + + +EM +R
Sbjct: 477 LIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQR 536
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G PD SY + H A + I M + + + YN + G+ D
Sbjct: 537 GICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPD 594
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L L LC+ + V H+F KH P+ + + R G + + +ML
Sbjct: 185 LSALSPPLCEAVVLAVLHRF----KHAHRPSYRFF----RWATVSGGFTHTTITYCKMLH 236
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-EPDAFSYSIFIHAFCEANDIH 131
IL E+M M++EM GA DAF + I +F A +I
Sbjct: 237 ------ILGKTRQFESMV---------AMIQEMGKAGALSMDAFK--VAIKSFAAAGEIK 279
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ V + M++ V ++NC++ L K EA Q+ D+M + +PD SY A++
Sbjct: 280 NAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALM 338
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C+ + A R+ M ++ + PD +N +++ L+R R A +++E M+ +G
Sbjct: 339 LAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPP 398
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+V TY++++ C K+GK++ A + FE M + P +T L LVG G
Sbjct: 399 PNVWTYTMLIRDHC-KQGKMDMAMECFEEMQEAKCQPDVATYTCL---LVGYGN------ 448
Query: 312 LADKMERSTS 321
A +M+R T+
Sbjct: 449 -AKQMDRVTA 457
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 38/347 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +IY L+ +++ C+ A+ K + P T++ L++GL G++SEA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E C D++ +NS++ +C++G+ A +LR+M + D F+YS I +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---------------------- 161
C I + + M+ + +V TYN ++R LCK
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 162 -------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
K++EA +L EMI RG +P+ +YN ++ +C + ++ A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD T+ ++K V R D +V+ ++ KRG + TYS++V G C +
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QS 416
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILAD 314
GK++ A + F+ MV G+ P T +L + L G L+ +EI D
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E +K ++ ++ +LC+ + A F + + +V TY+ LVRGL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L +M+ R+ +++ N LL+ K G + EA+ + +EM + G P+ +Y+
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +LD M R P++ T+ +I+ C ++V++ ++ + +RG
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ +A L M V+PD TY ++L L G+ ++A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++K + Y+ ++ G+CK GK+E+A F + +G+ P T ++ +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANA 330
L G L IL KME CT L A
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 132/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + L+ C + + A+ D +++ +P + T++ L++G V
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + K+F + +R + + ++ L++ C++G I A + +EM S G PD +Y I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + + Y II +CK KVE+A+ L + +G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + ++ A L+ +M ++ P+ TYN +++ +R G +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ E M+ GF S+ +++ L
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 8/282 (2%)
Query: 30 HQFFDNAKHEFTPTVKTYSILVR-----GLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
FF + + +F+ ++ ++ R G+ D+ + +A LF EM+ + ++ +
Sbjct: 36 SSFFSSCERDFS-SISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSR 93
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
A+ + + +++ G + ++ +I I+ FC + VL + +
Sbjct: 94 FFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+ T+N +I+ L KV EA L+D M+E G PD +YN+I+ C + ++AL
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ +M + NV D TY+ ++ L R G D A +++ ME +G SV TY+ +V GL
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
C K GK + + MV I P T +L + V G L
Sbjct: 274 C-KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I ++ +CK H +VA++ + P V Y+ +++G+
Sbjct: 257 MAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADR 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L EM ++ CP+D + N L++ C+ G +D +L +M G PD +Y+
Sbjct: 317 WEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ I +L +M PN +Y +++ LC E+ +A +L+ MI++G
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N I+ + C + V A+ L+ +M PD +Y+ V+ L + G+ + A
Sbjct: 437 CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEAL 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ M +G P+V TYS M L ++G++++ + F+ + D I
Sbjct: 497 ELLNVMINKGITPNVITYSSMAFAL-AREGRIDKVIQMFDNIQDATI 542
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
M +G+KP++ + +L +C + A + + P T++ILV G
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +L ++MLE C D++ + +++ CK G IDEA +L+ M S G +P+ SY+I
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C ++ M + +PN T+N II LCK VE+A +LL +M+ G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD SY+ ++ + AL L+ M + + P+ TY+ + L R GR D+
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVI 531
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++++++ Y+ ++ LCK++ + + A + MV G P ST L
Sbjct: 532 QMFDNIQDATIRSDAVLYNAVISSLCKRR-ETDLAIDFLAYMVSNGCMPNESTYTALIKG 590
Query: 300 LVGLGFL 306
L G L
Sbjct: 591 LASEGLL 597
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 16/358 (4%)
Query: 4 FGIKPSIYDLDQLLHALCKRKH-----------VKVAHQFFDNAKHEFTPTVKTYSILVR 52
FG + I + +L LC K VKV A+H TP ++ Y+ ++
Sbjct: 215 FGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIID 274
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G+ G A ++ M +++ +N++L+ +C A ++A +L EM
Sbjct: 275 GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPL 334
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +++I + FC+ + V +L+ M + +P+V TY +I CK ++EA LL
Sbjct: 335 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 394
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
M G P+ SY +L C A L++RM ++ +P+ T+N ++ L +
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKK 454
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G ++A E+ + M G P + +YS ++ GL K GK EEA + +M+++GI P T
Sbjct: 455 GLVEQAIELLKQMLVNGCNPDLISYSTVIDGL-GKAGKTEEALELLNVMINKGITPNVIT 513
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+ L G +D + + D ++ +T + L NA+ R+ ET+L D
Sbjct: 514 YSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRR----ETDLAID 567
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+E G P + +++ CK + A N P +Y+I+++GL
Sbjct: 362 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +L M+++ C + + N+++ +CK G +++A +L++M G PD SYS
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PNV TY+ + L + ++++ Q+ D + +
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDAT 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E ++A+ + M MP+ TY ++K L G A
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQ 601
Query: 240 EVWESMEKR 248
++ + R
Sbjct: 602 DLLSELCSR 610
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 143/314 (45%), Gaps = 15/314 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G + D + ++ C+ V+ A + A P TY +VRGL G +++A
Sbjct: 79 GNAAGVVDYNAMVAGYCRVGQVEAARRLA--AAVPVPPNAYTYFPVVRGLCGRGRIADAL 136
Query: 65 KLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ DEM R C P+ + H ++E+ C++G A +L + + G+ D + ++ I+A
Sbjct: 137 AVLDEMTSRSCVPIPPMYH-VIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINA 195
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI------- 176
C+ + +L + + ++ +YN +++ LC ++ + +L+DEM+
Sbjct: 196 ICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALS 255
Query: 177 ---ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ G PD Y I+ C +A +++RM + P+ YN VLK +
Sbjct: 256 QMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSAD 315
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
R+++A E+ M ++ T++++V C + G ++ + E M++ G P T
Sbjct: 316 RWEKAEELLTEMYQKNCPLDDVTFNILVDFFC-QNGLVDRVIELLEQMLEHGCMPDVITY 374
Query: 294 EMLRNRLVGLGFLD 307
+ N G +D
Sbjct: 375 TTVINGFCKEGLID 388
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P+ + +++ LCK+ V+ A + + P + +YS ++ GLG G+
Sbjct: 432 MIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGK 491
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+ + +++ ++S+ A+ + G ID+ M ++ DA Y+
Sbjct: 492 TEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNA 551
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + L M +PN TY +I+ L + EA LL E+ R
Sbjct: 552 VISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRR 611
Query: 180 A 180
A
Sbjct: 612 A 612
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 143/271 (52%), Gaps = 2/271 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
GIK S++ + ++ LCK +++A F K FTP + TY+ L+ G G +G L E
Sbjct: 51 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 110
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F++M + C D++ +N+L+ CK + +A L EM++ G +P+ +YS FI A
Sbjct: 111 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 170
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + + M+R L PN FTY +I CK + EA +L++E+++ G +
Sbjct: 171 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 230
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A+L C+ + A + M V P++ TY ++ ++ + A ++ +
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 290
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
M+++ P + Y ++ GLC + +LEEA
Sbjct: 291 EMKEKCIKPDLLLYGTILWGLCNES-RLEEA 320
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 150/327 (45%), Gaps = 25/327 (7%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++ + A CK ++ A +FF D + TP TY+ L+ G L+EA
Sbjct: 156 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 215
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +E+L+ ++++ + +LL+ +C+ G + EA + R M + G P+ +Y+ +H
Sbjct: 216 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 275
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F +A ++ +L MK + P++ Y I+ LC ++EEA L+ E+ E G N +
Sbjct: 276 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 335
Query: 184 EWSYNAILAYHCDRAEVNMAL-----------------------RLITRMTKENVMPDRH 220
Y ++ + + AL +L M + +MPD+
Sbjct: 336 AVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 395
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
Y ++ ++ G A + + M + G + Y+ ++ GL G++++A +
Sbjct: 396 AYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL-SHSGQVQKARNLLDE 454
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+ +G+ P L + LG +D
Sbjct: 455 MIGKGVLPDEVVYMCLIKKYYALGKVD 481
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F K P ++ + L+ L VG +RK F +M + +N +++ +CK
Sbjct: 9 FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK 68
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G+++ A + +M+ G PD +Y+ I + + + + MK + P+V T
Sbjct: 69 EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 128
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I CK E++ +A++ L EM G P+ +Y+ + C + A++ M
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 188
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P+ TY ++ + G A ++ E + + G +V TY+ ++ GLC ++G++
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLC-EEGRM 247
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+EA + F M++ G+ P T L
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTAL 272
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+++ GIK ++ LL LC+ +K A + F + P +TY+ LV G E
Sbjct: 222 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+ + EM E+ D+L + ++L +C ++EA ++ E++ G +A Y+
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 341
Query: 120 FIHAF-----------------------CEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+ A+ C+ N ++ D M ++P+ Y +I
Sbjct: 342 LMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
K+ ++EA L D MIE G D +Y A++ +V A L+ M + V+
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
PD Y ++K +G+ D A E+ M KRG +S ++V
Sbjct: 462 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 504
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 152/296 (51%), Gaps = 9/296 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA--HQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
M E GI PS+ L+ L+ ALCK A F + P TY L+ GL +G
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLG 205
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ EA++LF EM + C ++ + SL+ +C++ ++D A +L EM S G +P+ F+YS
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C++ +LD M +PN+ TY+ ++ LCK K++EA ++LD M +
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL--LVRVG--- 233
G PD Y I++ CD + + A + M + P+R T+++ +++ +V G
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 234 -RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+RA +++ SM RG T+ +V+ C KG L +A + MV +G P
Sbjct: 386 EHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFC-NKGDLHKAAHLVDEMVLDGCIP 440
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 144/334 (43%), Gaps = 46/334 (13%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGELSEARKLFDEM 70
Q+ + + ++ A FD+A E+T + T+S+++ L A +L M
Sbjct: 17 QVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRM 76
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
E KC + S+ A + +A + R+M+ EP SY N +
Sbjct: 77 KEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE-KVEEAYQLLDEMIERGANPDEWSYN- 188
R M+ + P+V + N +I+ LCKN ++ A ++ EM RG PD ++Y
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGT 196
Query: 189 ----------------------------AILAYH------CDRAEVNMALRLITRMTKEN 214
++ Y C +++ A+RL+ M +
Sbjct: 197 LINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ P+ TY+ ++ + G RA E+ + M R P++ TYS +VHGLC K+GKL+EA
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLC-KEGKLQEA 315
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
+ + M +G+ P + L +++ GF DI
Sbjct: 316 VEILDRMKLQGLRPDAG----LYGKIIS-GFCDI 344
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 44/265 (16%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ L+H LC+ K + A + + A P V TYS L+ G G S A +L
Sbjct: 224 PTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALEL 283
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D M+ R+ +++ +++L+ +CK G + EA +L M+ G PDA Y I FC+
Sbjct: 284 LDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCD 343
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTY-------NCIIRKLCKNEK--------------- 164
H LD M + PN T+ N +++ LC
Sbjct: 344 ICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGI 403
Query: 165 -------------------VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+ +A L+DEM+ G PDE ++NA++ DR +V +
Sbjct: 404 SIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAE 463
Query: 206 LIT--RMTKENVMPDRHTYNMVLKL 228
L+ M + M +T +++ K+
Sbjct: 464 LVQVELMVEHRKMGPDNTNDLIWKV 488
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T++ +I +L A +LL M E N E + +I + + A+R+ +M
Sbjct: 52 TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ P + +Y V +LV + A + M + G PSV++ +V++ LCK G
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME-RSTSCTIQELAN 329
++ A + F M + G PP S T L N L LG + + L +ME ++ S T+ +
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231
Query: 330 AMRG 333
+ G
Sbjct: 232 LIHG 235
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+ P + + +L+ CK ++K A + + PTV TY+ L+ G +G
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR+L +EM+E+ C D+ + L+ K N+ A EM S G +PD F+Y+
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A D H F++ + M + P+ TYN II LCK +++A L +M+ G
Sbjct: 495 RICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG 554
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC+R ++ A +L+ M + + P TY +++ R G A
Sbjct: 555 LQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAY 614
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M G P+ TY+V++H LC + G+ A +F M++ G+ P T +L
Sbjct: 615 GWFRKMLDVGIEPNEITYNVLIHALC-RTGRTLLAYHHFHEMLERGLAPNKYTYTLL 670
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 2/291 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
K S + + L+ AL +R V+ ++E PT+ TY+ ++ GL ++ A+
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM D++ +NS+L CKAGN+ EA +L ++R G P +Y+ I +C
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ R+ + M P+V TY ++ K + A + DEM+ +G PD +
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN + + + A +L M + + PD TYN+++ L + G A ++ M
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G P TY+ ++H C ++G L EA K MV +G+ P T +L
Sbjct: 551 VSDGLQPDCITYTCLIHAHC-ERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + L+ C+ ++ A + + + P V TY+IL+ G V L A
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+ FDEML + D A+N+ + A G+ +A + M G PD +Y++ I
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDG 533
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ + M L P+ TY C+I C+ + EA +LL+ M+ G P
Sbjct: 534 LCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPS 593
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ C R + A +M + P+ TYN+++ L R GR A +
Sbjct: 594 VVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFH 653
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +RG P+ TY++++ G C++ + YFEM GIPP
Sbjct: 654 EMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMH-QNGIPP 697
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 20 LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDI 79
L + H++ A + D+ + + TY+ L+ L + G + + L EM +
Sbjct: 290 LAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTL 349
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
+ +N+++ + K+ ++ A EMR++G PD +Y+ ++ +C+A ++ +L
Sbjct: 350 VTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGD 409
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
++R L P V TYN +I C+ +EEA +L +EM+E+G PD +Y ++
Sbjct: 410 LRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRN 469
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ MA M + + PD YN + + +G +A ++ E M +G YP TY+V
Sbjct: 470 LPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNV 529
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ GLC K G L++A MV +G+ P
Sbjct: 530 IIDGLC-KTGNLKDAKDLKMKMVSDGLQP 557
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 37/289 (12%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A H P V+ + ++R L D + R ++ EML+ + I+ +N+LL++ K G
Sbjct: 200 ACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRK 259
Query: 96 DEAHGMLREMRSIGA------------------------------------EPDAFSYSI 119
DEA +L+EM + G + +F+Y+
Sbjct: 260 DEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNP 319
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A E + V + M+ ++P + TYN II L K+E+VE A EM G
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN++L +C + AL L+ + + + P TYN ++ R+G + A
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ E M ++G +P V TY+++++G K + L A ++F+ M+ +G+ P
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVR-NLPMAREFFDEMLSKGLQP 487
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY++++ GL G L +A+ L +M+ D + + L+ A C+ G + EA +
Sbjct: 522 PDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M S G +P +Y+I IH C +++S + M + PN TYN +I LC+
Sbjct: 582 LNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCR 641
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ AY EM+ERG P++++Y ++ +C A+RL M + + PD T
Sbjct: 642 TGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 701
Query: 222 YNMVLK 227
+N + K
Sbjct: 702 HNALFK 707
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 3/262 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV G+ P+I+ + L+HA CK V+ A Q + + F P + TY+ L+ G
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + D M DI+ +NSL+ C+ G + EA + RE+ GA P+ +Y+
Sbjct: 248 HYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTT 305
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ND+ R+ + M+ L P V TYN I+RKLC+ K+++A +LL+EM ER
Sbjct: 306 LIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK 365
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N ++ +C ++ A+++ +M + + PD+ T+ ++ ++ D A
Sbjct: 366 VEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAK 425
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E M GF PS STYS +V
Sbjct: 426 EFLFEMLDAGFSPSYSTYSWLV 447
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 4/269 (1%)
Query: 29 AHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
A Q F++ + H F P + ++L+ L + K++ +M+ +I N L+
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
A CK+G++++A +L EM S PD F+Y+ I +C+ + + D M+R + P
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
++ TYN +I C+ ++ EA +L E+ GA P+ +Y ++ +C ++ ALRL
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLR 323
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M E + P TYN +L+ L G+ A + M +R P T + +++ C K
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC-K 382
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G + A K + M++ G+ P T + L
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKAL 411
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ P I + L++ C+ ++ A + F TP TY+ L+ G V +L EA
Sbjct: 262 GVSPDIVTYNSLIYGFCREGRMREALRLFREINGA-TPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L + M ++ +NS+L +C+ G I +A+ +L EM EPD + + I+A+
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAY 380
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ S +V M L P+ FT+ +I CK +V+ A + L EM++ G +P
Sbjct: 381 CKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSY 440
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ ++ + D+ +RL ++++ + D Y +++ L ++ + + A ++
Sbjct: 441 STYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTL 500
Query: 245 MEKRGFYPSVSTYSVMVHGLCK 266
M+ +G Y+ + + K
Sbjct: 501 MQGKGMKGDSVVYTSLAYAYFK 522
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 140/307 (45%), Gaps = 21/307 (6%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEF--TPTV---------------KTYSILVRGLGDV 57
++H L K K K A + A ++ +P+V + S LV +
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 140
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+A ++F+ M + A LL ++ KA + + ++M +G P+ +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ IHA C++ D+ ++L+ M+ + P++FTYN +I CK EA + D M
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G +PD +YN+++ C + ALRL + P+ TY ++ RV +
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEE 318
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A + E ME G +P V TY+ ++ LC ++GK+++A + M + + P + T L
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLC-EEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377
Query: 298 NRLVGLG 304
N +G
Sbjct: 378 NAYCKIG 384
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 17/252 (6%)
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+A + MR G +P + ++ +++ +A + V++V M R +VPN+ +N +I
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 204
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK+ VE+A QLL+EM R PD ++YN +++ +C + AL + RM + V
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TYN ++ R GR A ++ E G P+ TY+ ++ G C + LEEA +
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFR--EINGATPNHVTYTTLIDGYC-RVNDLEEALR 321
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMER-------------STSC 322
E+M EG+ P T + +L G + D +L + ER + C
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 323 TIQELANAMRGK 334
I ++ +AM+ K
Sbjct: 382 KIGDMGSAMKVK 393
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V TY+ ++R L + G++ +A +L +EM ERK D + N+L+ A CK G++ A +
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++M G +PD F++ IH FC+ +++ S L M P+ TY+ ++
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ E +L DE+ +G D Y A++ C ++ A R+ T M + + D
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
Y + + G+ A+++ + M+KR ++ Y
Sbjct: 513 YTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+KP + L+H CK V A +F F+ F+P+ TYS LV D
Sbjct: 396 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 455
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+L DE+ + VDI + +L+ +CK I+ A + M+ G + D+ Y+
Sbjct: 456 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 515
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+A+ +A + +LD M + L+ + Y C
Sbjct: 516 LAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRC 550
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 152/290 (52%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+V+ G KP + ++H +CK K A QF+ + H+ F+P K +V GL D +
Sbjct: 140 IVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRK 199
Query: 60 LSEARKLF-DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A +L D M + + L +N+L+ C+AG ID+A + MR G EPD +Y+
Sbjct: 200 VDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYN 259
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+F++ FC+ + ++L M+R + P+V++YN +++ +CK ++AY L+ +
Sbjct: 260 VFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWP 319
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
D SYN I+ C + A +L M ++ + PD T+ + +K + G F+ A
Sbjct: 320 KGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIA 379
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ + M + G P Y+ ++ LC K GK+E A F MV++GI P
Sbjct: 380 KKLLDQMTEMGLSPDCIFYTTIIDHLC-KSGKVEMAHSIFCDMVEQGISP 428
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P + + L+ C + A + + P V +Y+ L++G+ +A
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L + K D++++N++++A CK G+ A+ + EM G PD +++IFI A
Sbjct: 310 YLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKA 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + ++LD M L P+ Y II LCK+ KVE A+ + +M+E+G +PD
Sbjct: 370 FLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPD 429
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
S+NA++ C + V+ A+ L M PD TY +++ L+ + A VW
Sbjct: 430 VISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWG 489
Query: 244 SMEKRGFYPSVSTYSVMVHG 263
M +GF + ++ G
Sbjct: 490 QMMDKGFTLDRAIAQTLIRG 509
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 13/319 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-----TPTVKTYSILVRGLGDVGE 59
G S + + + LCK K+ F D H+ P + ++I + L G
Sbjct: 74 GFSLSSFTYSRFITGLCKVKNF----TFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++F+++++ D++ + ++ +CK D A R+M G PD +
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189
Query: 120 FIHAFCEANDIHSVFR-VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + + ++D MK + + YN +I C+ ++++A + M
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L Y CD ++ A +L+ M + + PD ++YN +LK + + D+A
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309
Query: 239 TEVWES-MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
+ + M +G VS Y+ ++ CK G A K FE M +GIPP T +
Sbjct: 310 YLLMTNKMWPKGLCDVVS-YNTIIKAFCKI-GDTTSAYKLFEEMGQKGIPPDVVTFTIFI 367
Query: 298 NRLVGLGFLDIIEILADKM 316
+G G +I + L D+M
Sbjct: 368 KAFLGKGSFNIAKKLLDQM 386
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 37/274 (13%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ G G + +A ++FDEM + C V + +N + + D A+ +M + G
Sbjct: 16 IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF-------------------- 150
+F+YS FI C+ + + +L M+ N +P+++
Sbjct: 76 SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135
Query: 151 ---------------TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
TY II +CK +K + A Q +MI +G +PD + AI+ C
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195
Query: 196 DRAEVNMALRLITRMTKEN-VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
D +V++A LI + K V YN ++ R GR D+A + M + G P +
Sbjct: 196 DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDL 255
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY+V ++ C + L++A K ++M GI P
Sbjct: 256 VTYNVFLNYFCDEL-MLDDAKKLLKLMERSGIEP 288
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 4/204 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L + S + KAG ID+A + EM + Y+ FI +
Sbjct: 10 LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQ 69
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + FTY+ I LCK + +LL +M PD W++N L
Sbjct: 70 MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+++AL + ++ K PD TY +++ + ++ +FD A + W M +GF P
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189
Query: 260 MVHGLCKKKGKLEEACKYFEMMVD 283
+V GLC + K++ A +E+++D
Sbjct: 190 IVVGLCDGR-KVDLA---YELIID 209
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ L++ LCK A + FD+ K P + TY L++G G + E+
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFD M+ DI+ +N+L++ C AG +DEA +L M S+G +PD +Y I+
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 393
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + + + M + PN+ TYN I++ L + A +L + + G +
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 453
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN IL C + ALR+ + ++ + T+N+++ L++ GR D A +++
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 513
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ G P V TYS+M L ++G LEE F M + G S + + +L+
Sbjct: 514 AHSANGLVPDVRTYSLMAENLI-EQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 572
Query: 304 G 304
G
Sbjct: 573 G 573
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 12/276 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P ++ + LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 57 VG--------ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
G + +A ++ + M++ D + +NS+L C +G EA G L++MRS
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G EP+ +YS ++ C+ ++ DSM + L P++ TY +++ CK +V E+
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L D M+ G PD +YN ++ C +++ A +L+ M V PD TY ++
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 393
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RV R D A +++ M G P++ TY++++ GL
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L++ L + + ++ A+ + TPTV TY+IL+ G L
Sbjct: 50 GRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLD 109
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD + LL+ +C +A + LR M +G PD FSY+
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 121 IHAFCEANDIHSVFRVLDSM---KRYNLVPNVFTYNCIIRKLCKN--------EKVEEAY 169
+ C+ N +L M + P+V +YN ++ K + +++A
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAM 229
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++L+ M++ G PD +YN+IL +C + A+ + +M + V P+ TY+ ++ L
Sbjct: 230 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ GR A ++++SM KRG P ++TY ++ G C K+G++ E+ K F++MV G+ P
Sbjct: 290 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC-KEGRVIESEKLFDLMVRIGVKP 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYN---AILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
E+A + DE++ RG + N A +A H A V+ R+ R V P HTY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRM-ARAGAGKVTPTVHTY 95
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADK 141
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 149/328 (45%), Gaps = 32/328 (9%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ + LL AL + V +DN K P V TY++L++ L + AR++
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE--------------- 111
DEM + C D ++H +++ A+CK +DEA G+L EM +GA
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMR 244
Query: 112 ---------------PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
PD +Y+ + AFC+A ++ +L M VPNV T+ ++
Sbjct: 245 EVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLV 304
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ + KV +A + + M+ G P SYN ++ C ++ AL + + M K + +
Sbjct: 305 KGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCL 364
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TY+ ++ + G D A +W M G P+V Y+ MV LCKK ++A
Sbjct: 365 PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKV-MFDQAEN 423
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ M E PP + T L L LG
Sbjct: 424 LIDKMSLENCPPNTLTFNTLIRSLCDLG 451
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G PS + L+ LC +K A F K + P V+TYS L+ G G+
Sbjct: 323 MVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGD 382
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++++M C +++ + ++++ +CK D+A ++ +M P+ +++
Sbjct: 383 LDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNT 442
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ V M+RY PN TYN ++ L + E+A ++L EM+ G
Sbjct: 443 LIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHG 502
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
SYN ++ C + A+ L+ RM + + PD T+N ++ + G A
Sbjct: 503 FELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAA 562
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M+ ++ Y+ ++ GLC + KL++A Y M+ EGI P +T +L
Sbjct: 563 WMLGRMDAVNCPRNIVAYTSLMSGLCSQH-KLDDAMVYLLKMLYEGICPNEATWNVL 618
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 16 LLHALCKRKHVKVAH---QFFDNAKHEF---TPTVKTYSILVRGLGDVGELSEARKLFDE 69
L+ A+C A + F A+H+ PTV+ Y+ L+ L ++ ++D
Sbjct: 93 LVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDN 152
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M + ++ +N L++A+C+ + A ML EM G PD S++ I A C+ +
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ +L M P +YN ++ LC ++ E + ++DEM+ RG PD +Y +
Sbjct: 213 LDEARGILAEM-----TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTS 267
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
I+ C E+ MA ++ RM E +P+ T+ +++K G+ A +W M G
Sbjct: 268 IVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEG 327
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
+ PS +Y+V++ GLC G L+ A F M P T L + G LD+
Sbjct: 328 WAPSTISYNVLIRGLC-HIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVA 386
Query: 310 EILADKMERS 319
+ + M +
Sbjct: 387 MSIWNDMTNA 396
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G++P ++ A CK + +++A E P V+T+++LV+G D G+
Sbjct: 253 MVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGK 312
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +++ M+ +++N L+ +C G++ A + M PD +YS
Sbjct: 313 VHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYST 372
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F +A D+ + + M PNV Y ++ LCK ++A L+D+M
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN 432
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ CD AL + M + P+ TYN +L L R G + A
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M GF S+ +Y+ + GLC+ + ++EA M+ +GI P + T
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMR-MIKEAMILLGRMIIQGIQPDAFT 544
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 23/270 (8%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLER--KCPVDILAHNSLLEAMC---KAGNIDEA- 98
+ + VR L G+L + EM R CP +L+ A+C +AG D A
Sbjct: 56 RAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACP-----EGALVAAICAFARAGAADRAL 110
Query: 99 HGMLREMRSIG-AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
R +G A P Y+ + A N + +V V D+M++ + PNV+TYN +I+
Sbjct: 111 KTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIK 170
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
LC+N++V A ++LDEM +G PDE S+ I++ C ++ A ++ MT P
Sbjct: 171 ALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----P 225
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+YN V+ L R V + M RG P Y+ +V CK + +L AC
Sbjct: 226 VGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKAR-ELRMACAI 284
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
MV EG P T +L GF D
Sbjct: 285 LARMVTEGCVPNVQTFTVLVK-----GFFD 309
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +G P+ ++LLH L + + + A + + H F ++ +Y+ + GL +
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L M+ + D N+++ A CK GN+ A ML M ++ + +Y+
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTS 582
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ C + + L M + PN T+N ++R + + L+D +IE
Sbjct: 583 LMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHIIE 640
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ + A + A P TY+ ++RGL D G + EA
Sbjct: 139 GTAVDVFAYNTLVAGYCRYGQLDAARRLI--ASMPVAPDAYTYTPIIRGLCDRGRVGEAL 196
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML R C ++ + LLEA+CK+ +A +L EMR+ G P+ +Y++ I+
Sbjct: 197 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 256
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + L+ + Y P+ +Y +++ LC ++ E+ +L EM+E+ P+E
Sbjct: 257 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 316
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A++++ +M+ + N+V+ + + GR D A + +
Sbjct: 317 VTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 376
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P +Y+ ++ GLC+ + + E+A + + MV + PP T L G
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 435
Query: 305 FLDIIEILADKM 316
++ +L ++M
Sbjct: 436 LIEQATMLIEQM 447
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 154/320 (48%), Gaps = 6/320 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +PS+ LL A+CK A + D + + TP + TY++++ G+ G
Sbjct: 202 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 261
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR+ + + D +++ ++L+ +C A ++ + EM P+ ++ +
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC + +VL+ M + N N +I +CK +V++A+Q L+ M G
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD SY +L C A L+ M ++N P+ T+N + +L + G ++AT
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 441
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M + G ++ TY+ +V+G C +G+++ A + F M P + T L
Sbjct: 442 MLIEQMSEHGCEVNIVTYNALVNGFC-VQGRVDSALELFYSM---PCKPNTITYTTLLTG 497
Query: 300 LVGLGFLD-IIEILADKMER 318
L LD E+LA+ +++
Sbjct: 498 LCNAERLDAAAELLAEMLQK 517
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+ +G +P +L LC K + + F + + P T+ +LVR G
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ ++M C + N ++ +CK G +D+A L M S G PD SY+
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A +L M R N PN T+N I LC+ +E+A L+++M E G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YNA++ C + V+ AL L M + P+ TY +L L R D A
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAA 508
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M ++ P+V T++V+V C+K G ++EA + E M++ G P
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQK-GLMDEAIELVEQMMEHGCTP 556
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 4/266 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V + L+R L G S+A ++ VD+ A+N+L+ C+ G +D A
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR-- 164
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
R + S+ PDA++Y+ I C+ + +LD M P+V TY ++ +CK
Sbjct: 165 -RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ +A ++LDEM +G P+ +YN I+ C V+ A + R++ PD +
Sbjct: 224 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y VLK L R++ E++ M ++ P+ T+ ++V C + G +E A + E M
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC-RGGMVERAIQVLEQM 342
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
G ++ ++ N + G +D
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVD 368
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 4/234 (1%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +L D R D+ L+ +C+ G +A +LR G D F+Y+ +
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C + + R++ SM + P+ +TY IIR LC +V EA LLD+M+ RG P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y +L C A+ ++ M + P+ TYN+++ + R GR D A E
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ GF P +Y+ ++ GLC K + E+ + F M+++ P T +ML
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAK-RWEDVEELFAEMMEKNCMPNEVTFDML 322
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+ + + LC++ ++ A + ++H + TY+ LV G G
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF M C + + + +LL +C A +D A +L EM P+ ++++
Sbjct: 472 VDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + +++ M + PN+ TYN ++ + K+ EEA +LL ++ G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y++I+ V A+++ + + P YN +L L + D A
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M G P+ TY ++ GL
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGL 673
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R++D P+V+ +IR LC+ + +A ++L G D ++YN ++A +
Sbjct: 95 RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 154
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +++ A RLI M V PD +TY +++ L GR A + + M RG PSV
Sbjct: 155 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
TY+V++ +CK G +A + + M +G P T ++ N + G +D
Sbjct: 212 VTYTVLLEAVCKSTG-FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 3/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP I + L+ C R++V A + F+ K P V Y++L+ G
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF E+ + I ++NSL++ +C +G I +L EM PD +Y+I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ I VL M + + PN+ TYN ++ C V A + + M++ G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C V+ A+ L M +N++PD +YN ++ L +GR
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ + M G P V TY++++ CK + ++A F +V EGI P
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQ-PFDKAISLFRQIV-EGIWP 577
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV + P Y + L+ ALCK + A +K P + TY+ L+ G
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR+LF+ M++R D+L +N L++ CK +DEA + +E+ + P SY+
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + I V ++LD M P+V TYN +I LCK ++ EA +L M+++G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ +C R VN+A + RM K + PD YN+++ + D A
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M + P +++Y+ ++ GLC G++ + + M D G P T +L
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLC-NLGRIPHVQELLDEMCDSGQSPDVITYNIL 551
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 16 LLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ L K +K A H + K P + YS L+ GL G +S+A L ++ ER
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+D + +NSL++ C G E +L +M +PD ++++I I A C+ I
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL M + P++ TYN ++ C E V EA +L + M++RG PD +YN ++ +
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V+ A+ L + +N++P +YN ++ L GR ++ + M P V
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY++++ LC K+G++ EA MM+ +G+ P
Sbjct: 406 VTYNILIDALC-KEGRILEALGVLVMMMKKGVKP 438
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 160/335 (47%), Gaps = 3/335 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P++ + +++ C + A F N + TY L+ GL G+
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L EM + +++ +++L++ +CK G + +A G+ ++ G DA +Y+
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C V ++L M R N+ P+ +T+N +I LCK ++ EA +L M +RG
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YNA++ +C R V+ A L RM K + PD YN+++ + D A
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + + P++++Y+ ++ GLC G++ K + M PP T +L +
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLC-NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414
Query: 300 LVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
L G L+ + +L M++ I M G
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P++ L+ LCK V A + TY+ L+ G VG E
Sbjct: 191 VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVT 250
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ D N L++A+CK G I EA G+L M G +PD +Y+ + +
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGY 310
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++H + + M + L P+V YN +I CK + V+EA L E+ + P
Sbjct: 311 CSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTI 370
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN+++ C+ ++ +L+ M PD TYN+++ L + GR A V
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K+G P++ TY+ M+ G C + + A F MV G+ P
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRN-NVNVAKDIFNRMVKSGLEP 473
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV P D+LL A+ + H A F + + +P++ T++IL+
Sbjct: 46 MVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSH 105
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +L+ +++ N+++ C G I +A + + + G D F+Y
Sbjct: 106 TAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGT 165
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + I + +L M++ ++ PN+ Y+ +I LCK+ V +A L ++ ERG
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN+++ C +L+T+M +ENV PD +T+N+++ L + GR A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V M KRG P + TY+ ++ G C ++ + EA + F MV G+ P
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRE-NVHEARELFNRMVKRGLEP 333
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 151/357 (42%), Gaps = 73/357 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G++P + + + L+ CK K V A F PT+ +Y+ L+ GL + G
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------- 102
+S +KL DEM P D++ +N L++A+CK G I EA G+L
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 103 ------------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
M G EPD +Y++ I+ +C+ + + M+ N
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L+P++ +YN +I LC ++ +LLDEM + G +PD +YN +L C + A+
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 205 RLITRMTKENVMPDRHT-----------------------------------YNMVLKLL 229
L R E + PD +T Y +++ L
Sbjct: 566 SLF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ G F A + ME P T+ +++ G+ ++ + ++A K E M+ G+
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITFEIII-GVLLQRNETDKAEKLREEMIARGL 680
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F+ M+ P + LL A+ + G+ A + +++S G P +++I
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + F +L ++ + PN+ T+N II C N + +A ++ +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+++Y ++ ++ AL L+ M K +V P+ Y+ ++ L + G A
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + +RG TY+ ++ G C G+ +E + MV E + P T +L +
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCC-SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 300 L 300
L
Sbjct: 275 L 275
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
C+ N+D+A M + P + + A + + ++ + P++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
T+ +I A+ LL +++ G P+ ++N I+ C + AL
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ + + D+ TY ++ L + G+ A + + MEK P++ YS ++ GLC K G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC-KDG 209
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ +A + + GI + T L + +G + L KM R
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G P + + LL A CK + A F P T +V L +L
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +L C ++ + L+ A+CK G+ EA +L +M PDA ++ I
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLV 146
I + N+ ++ + M LV
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLV 681
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/179 (16%), Positives = 74/179 (41%), Gaps = 5/179 (2%)
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C ++ + M R P ++ ++ + + A L ++ +G +
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P ++ ++ + ++ A L+ + K P+ T+N ++ G +A +
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+++ +G+ TY +++GL K G+++ A + M + P YS+ ++ L
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGL-SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG+ ++ LL LCK K VK A F + P +++ LV G L
Sbjct: 221 MDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARML 280
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EAR EM E ++ + SL+EA C + + +L EM S G P+ +Y+I
Sbjct: 281 NEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIV 340
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A V D +KR VP+ YN II L + ++E+A + DEM G
Sbjct: 341 MHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGI 400
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +N +++ CD ++ AL+++ +M +++ PD TY +LKL +
Sbjct: 401 PPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPF 460
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M ++ P STY ++V LC + GK ++C + E MV +G P T +++ +L
Sbjct: 461 LICHMFRKDISPDFSTYILLVTWLC-RNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKL 519
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ T + ++R L ++A F++M + D A N+LL+ +CK ++ A G+
Sbjct: 194 SLATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVF 253
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+E+R + PD S++ +H +C+A ++ + M+ + P+V TY +I C
Sbjct: 254 QELRGV-VPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCME 312
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + Y +L+EM +G P+ +Y ++ AL + ++ ++ +PD Y
Sbjct: 313 KDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFY 372
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +L R GR + A V++ M + G P+V+ ++ M+ C + E A K M
Sbjct: 373 NSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAAC-DHSQAENALKILVKME 431
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++ P T L ++ I+ L M R
Sbjct: 432 EQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFR 467
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 129/275 (46%), Gaps = 3/275 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P + L+H C+ + + A + +H F+P+V TY+ L+ +
Sbjct: 260 VPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVY 319
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +EM + C +++ + ++ A+ KAG EA + +++ G PDA Y+ I+
Sbjct: 320 AILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYIL 379
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
A + V D M R + P V +N +I C + + E A ++L +M E+ PD
Sbjct: 380 GRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDI 439
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +L C R + + LI M ++++ PD TY +++ L R G+ ++ E
Sbjct: 440 KTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEE 499
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
M +GF P T+ +++ L KG L A K +
Sbjct: 500 MVLKGFMPKQETFDLVMEKL--DKGNLHSAKKKIQ 532
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 114 AFSYSIFIHA---FCEANDIHSVF-RVLDSMKRYNLVPNVF-------------TYNCII 156
AF + ++ A +C D++++ +L K+++L+ + T ++
Sbjct: 143 AFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVM 202
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
R+L + +A ++M + G D + NA+L C V A R + + + V
Sbjct: 203 RRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRA-RGVFQELRGVVP 261
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
PD ++N ++ + + A + + ME+ GF PSV TY+ ++ C +K
Sbjct: 262 PDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEK 313
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 30/325 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ PS++ + +L LCK + +K A + FD + P TY+ L+ G VG
Sbjct: 183 MVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGG 242
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF---- 115
+ EA + M E+ +++ +NSLL +C +G +D+A +L EM G P F
Sbjct: 243 IEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV 302
Query: 116 ------------------------SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+Y I ++ C I VL + + P+ +
Sbjct: 303 FDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKIS 362
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN ++ C+ V++A ++M ERG P+ ++N +++ C+ EV+ A + RM
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
++ V P TYN ++ + G F R E + M+K G P+V +Y +++ LCK + KL
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR-KL 481
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A M+ G+ P + ML
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNML 506
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 141/287 (49%), Gaps = 3/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + GIKP++ L++ LCK RK + D +P + Y++L+ + +
Sbjct: 456 MDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSK 515
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A + FDEM++ ++ +N+L+ + + G + +A + +M G PD +Y+
Sbjct: 516 LKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNS 575
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + ++ + + D MK + P V T++ +I C+ E V ++ EM++
Sbjct: 576 LISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMD 634
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD++ YN ++ + + V A+ L +M + V D+ TYN ++ +R R
Sbjct: 635 LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIK 694
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + M+ +G P V TY++++ GLC K A ++ MV+ G+
Sbjct: 695 HLVDDMKAKGLVPKVDTYNILIKGLCDLK-DFNGAYFWYREMVERGL 740
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
LL+ LC+ ++ A + ++ TP+ +Y+ILV G++ +A ++M ER
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+ + N+++ C+ G +D A +R M G P +Y+ I+ + + F
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCF 450
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
LD M + + PNV +Y +I LCK+ K+ +A +L +MI RG +P+ YN ++
Sbjct: 451 EFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEAS 510
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +++ A R M + + TYN ++ L R GR +A +++ M +G P V
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV 570
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
TY+ ++ G K ++ + ++ M GI P T
Sbjct: 571 ITYNSLISGYAKSVNT-QKCLELYDKMKILGIKPTVGT 607
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 147/326 (45%), Gaps = 30/326 (9%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K F P+ ++ + L+R L D + +F ++++ D +A+ ++A ++D
Sbjct: 115 KDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLD 174
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+ +++ M G P F+Y++ + C+ I ++ D M + N+VPN TYN +I
Sbjct: 175 KGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLI 234
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK +EEA + M E+ + +YN++L C V+ A ++ M +
Sbjct: 235 DGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFL 294
Query: 217 P----------------------------DRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
P D TY ++L L RVGR ++A EV + +
Sbjct: 295 PGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN 354
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
G PS +Y+++V+ C ++G +++A E M + G+ P T + ++ G +D
Sbjct: 355 GVTPSKISYNILVNAYC-QEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDH 413
Query: 309 IEILADKM-ERSTSCTIQELANAMRG 333
E +M E+ S T++ + + G
Sbjct: 414 AETWVRRMVEKGVSPTVETYNSLING 439
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA L+ M + + N LL + + + ++ + ++ G PDA +Y
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A D+ F ++ SM + + P+VF YN ++ LCK ++++A +L DEMI+R
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ +C + AL RM ++NV + TYN +L L GR D A
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282
Query: 240 EVWESMEKRGFYPSV----------------------------STYSVMVHGLCKKKGKL 271
EV ME GF P TY ++++GLC + G++
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLC-RVGRI 341
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+A + +V+ G+ P + +L N
Sbjct: 342 EKAEEVLAKLVENGVTPSKISYNILVN 368
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 146/307 (47%), Gaps = 8/307 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P+ + ++ C+ V A + + +PTV+TY+ L+ G G G
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGH 445
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ DEM + +++++ SL+ +CK + +A +L +M G P+A Y++
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + + FR D M + + + TYN +I L +N +V++A L +M +G
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +YN++++ + L L +M + P T++ ++ + G
Sbjct: 566 CNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMD 624
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP----PYSSTV-E 294
++++ M + P Y+ M++ + G + +A + MVD+G+ Y+S +
Sbjct: 625 KMFQEMLQMDLVPDQFVYNEMIYSYA-EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683
Query: 295 MLRNRLV 301
LR+R V
Sbjct: 684 YLRDRRV 690
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
+TY IL+ GL VG + +A ++ +++E +++N L+ A C+ G++ +A +
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M G EP+ +++ I FCE ++ + M + P V TYN +I +
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGH 445
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++ LDEM + G P+ SY +++ C ++ A ++ M V P+ YNM
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+++ + + A ++ M + G ++ TY+ +++GL + G++++A F M +
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGL-GRNGRVKKAEDLFLQMAGK 564
Query: 285 GIPP 288
G P
Sbjct: 565 GCNP 568
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 159 LCKNEK-VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
LC K ++EA L M + G P S N +L D L + + P
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D Y ++ V + D+ E+ +SM K G PSV Y++++ GLCK + ++++A K
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVR-RIKDARKL 214
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSC---TIQELANAMRG 333
F+ M+ + P + T L + +G ++ ++M E++ C T L N + G
Sbjct: 215 FDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCG 274
Query: 334 KTGFRKSRSEETELES 349
+R E+E
Sbjct: 275 SGRVDDAREVLLEMEG 290
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIKP++ L++A K V + F + + + P Y+ ++ + G + +A
Sbjct: 599 LGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKA 658
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M+++ D + +NSL+ A + + E ++ +M++ G P +Y+I I
Sbjct: 659 MSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKG 718
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ D + + M L+ NV +I L + + EA + E+ G N
Sbjct: 719 LCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGLN 776
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 3/262 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV G+ P+I+ + L+HA CK V+ A Q + + F P + TY+ L+ G
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + D M DI+ +NSL+ C+ G + EA + RE+ GA P+ +Y+
Sbjct: 248 HYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTT 305
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ND+ R+ + M+ L P V TYN I+RKLC+ K+++A +LL+EM ER
Sbjct: 306 LIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK 365
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N ++ +C ++ A+++ +M + + PD+ T+ ++ ++ D A
Sbjct: 366 VEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAK 425
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E M GF PS STYS +V
Sbjct: 426 EFLFEMLDAGFSPSYSTYSWLV 447
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 4/269 (1%)
Query: 29 AHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
A Q F++ + H F P + ++L+ L + K++ +M+ +I N L+
Sbjct: 146 AIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIH 205
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
A CK+G++++A +L EM S PD F+Y+ I +C+ + + D M+R + P
Sbjct: 206 ACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSP 265
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
++ TYN +I C+ ++ EA +L E+ GA P+ +Y ++ +C ++ ALRL
Sbjct: 266 DIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLR 323
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M E + P TYN +L+ L G+ A + M +R P T + +++ C K
Sbjct: 324 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC-K 382
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G + A K + M++ G+ P T + L
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKAL 411
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ P I + L++ C+ ++ A + F TP TY+ L+ G V +L EA
Sbjct: 262 GVSPDIVTYNSLIYGFCREGRMREALRLFREINGA-TPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L + M ++ +NS+L +C+ G I +A+ +L EM EPD + + I+A+
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAY 380
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ S +V M L P+ FT+ +I CK +V+ A + L EM++ G +P
Sbjct: 381 CKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSY 440
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ ++ + D+ +RL ++++ + D Y +++ L ++ + + A ++
Sbjct: 441 STYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTL 500
Query: 245 MEKRGFYPSVSTYSVMVHGLCK 266
M+ +G Y+ + + K
Sbjct: 501 MQGKGMKGDSVVYTSLAYAYFK 522
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 21/316 (6%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEF--TPTV---------------KTYS 48
K S+ ++H L K K K A + A ++ +P+V + S
Sbjct: 72 KHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILS 131
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
LV + +A ++F+ M + A LL ++ KA + + ++M +
Sbjct: 132 WLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV 191
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P+ +++ IHA C++ D+ ++L+ M+ + P++FTYN +I CK EA
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+ D M G +PD +YN+++ C + ALRL + P+ TY ++
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDG 309
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
RV + A + E ME G +P V TY+ ++ LC ++GK+++A + M + + P
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLC-EEGKIKDANRLLNEMSERKVEP 368
Query: 289 YSSTVEMLRNRLVGLG 304
+ T L N +G
Sbjct: 369 DNVTCNTLINAYCKIG 384
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 17/252 (6%)
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+A + MR G +P + ++ +++ +A + V++V M R +VPN+ +N +I
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 204
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
CK+ VE+A QLL+EM R PD ++YN +++ +C + AL + RM + V
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TYN ++ R GR A ++ E G P+ TY+ ++ G C + LEEA +
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFR--EINGATPNHVTYTTLIDGYC-RVNDLEEALR 321
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMER-------------STSC 322
E+M EG+ P T + +L G + D +L + ER + C
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 323 TIQELANAMRGK 334
I ++ +AM+ K
Sbjct: 382 KIGDMGSAMKVK 393
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V TY+ ++R L + G++ +A +L +EM ERK D + N+L+ A CK G++ A +
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++M G +PD F++ IH FC+ +++ S L M P+ TY+ ++
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ E +L DE+ +G D Y A++ C ++ A R+ T M + + D
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVV 512
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
Y + + G+ A+++ + M+KR ++ Y
Sbjct: 513 YTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+KP + L+H CK V A +F F+ F+P+ TYS LV D
Sbjct: 396 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 455
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+L DE+ + VDI + +L+ +CK I+ A + M+ G + D+ Y+
Sbjct: 456 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 515
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+A+ +A + +LD M + L+ + Y C
Sbjct: 516 LAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRC 550
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF P +K+++I++ G G L++
Sbjct: 211 DYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLAD 270
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++++E++ K D+ + + + ++ K+G + A + M G PD + I
Sbjct: 271 AKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I + M +V TYN +I+ CK ++E+ Y+LLD+M +G +P
Sbjct: 331 QLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSP 390
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ IL +V + L+ RM K D TYN++L L V VW
Sbjct: 391 NNMTYSYILKTTEKPKDV---ISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVW 447
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+ G P ++++MVHGL KL+EA Y+ M G+ P T
Sbjct: 448 DEMERNGSGPDQRSFTIMVHGL-HSHDKLDEALHYYRTMESRGMTPEPRT 496
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 145/310 (46%), Gaps = 8/310 (2%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT---YSILVRGLGDVGELSEARKLFDEML 71
++L L + K V++ Q FD E +V T +++L+ ++ EA +F +
Sbjct: 151 EMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRK 210
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+ +D++ LL ++C+ +++EA + + + P S++I ++ +C +
Sbjct: 211 DYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKD-EFPPVIKSWNIILNGWCVKGSLA 269
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
RV + + L P++FTY I L K+ K+ A +L M E+G NPD N I+
Sbjct: 270 DAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCII 329
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C + + AL + M D TYN ++K ++ R ++ E+ + ME +G
Sbjct: 330 DQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVS 389
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+ TYS ++ K K ++ + M G S T ++ N V + +++
Sbjct: 390 PNNMTYSYIL----KTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQL 445
Query: 312 LADKMERSTS 321
+ D+MER+ S
Sbjct: 446 VWDEMERNGS 455
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 47/244 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P + + ++ LC +K +
Sbjct: 313 MWEKGINPDVAICNCIIDQLCFKKRI---------------------------------- 338
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++F EM +R C D+ +N+L++ CK +++ + +L +M G P+ +YS
Sbjct: 339 PEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYI 398
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-DEMIERG 179
+ + D+ S ++ M++ + TYN I+ L + E+ QL+ DEM G
Sbjct: 399 LKTTEKPKDVIS---LMQRMEKSGCRLDSDTYNLIL-NLYVSWDYEKGVQLVWDEMERNG 454
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR-- 237
+ PD+ S+ ++ +++ AL M + P+ T KLLV+ R +
Sbjct: 455 SGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRT-----KLLVKAIRMKKDE 509
Query: 238 -ATE 240
ATE
Sbjct: 510 PATE 513
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++FG +P + + L++ C+ V A + F P V Y+ ++ G +G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A +LFD M D + +NSL+ +C +G +A ++R+M P+ +++
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M R + P+VFTYN +I LC + +V+EA Q+LD M+ +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C V+ +L M + ++ D TYN +++ + GR D A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E++ M+ R P++ TYS++++GLC ++E+A FE M
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLC-MNWRVEKALVLFENM 407
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 5 GIKPSIYDLDQLLHALC-KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++ + L+ LC + A D + P V T++ ++ G+ SEA
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL++EM R D+ +NSL+ +C G +DEA ML M + G PD +Y+ I+
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + ++ M + LV + TYN II+ + + + A ++ M R P+
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C V AL L M K + D TYN+V+ + ++G + A +++
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
S+ +G P V +Y+ M+ G C+K+ + +++ + M ++G+ P
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKR-QWDKSDLLYRKMQEDGLLP 484
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D+ ++N ++ +C+ A ++ +M G EPD + S I+ FC+ N + ++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
M+ P+V YN II CK V +A +L D M G D +YN+++A C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A RL+ M +++P+ T+ V+ + V+ G+F A +++E M +R P V TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ +++GLC G+++EA + ++MV +G P T L N
Sbjct: 283 NSLINGLC-MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D ++L + K K+ + F + + + +Y+I++ L A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ D++ +SL+ C+ + +A ++ +M +G PD Y+ I C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ + D M+R + + TYN ++ LC + + +A +L+ +M+ R P+ +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + + A++L MT+ V PD TYN ++ L GR D A ++ + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P V TY+ +++G CK K +++E K F M G+
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSK-RVDEGTKLFREMAQRGL 345
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E LF +M++ + I+ + +L + K+ N D + M G D +SY+I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + V+ M ++ P+V T + +I C+ +V +A L+ +M E G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN I+ C VN A+ L RM ++ V D TYN ++ L GR+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M R P+V T++ ++ K+GK EA K +E M + P T L N
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFV-KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 300 LVGLGFLDIIEILADKM 316
L G +D + + D M
Sbjct: 289 LCMHGRVDEAKQMLDLM 305
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
N++E + +M P +S + ++ + V + M+ + ++++YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+ + A ++ +M++ G PD + ++++ C V A+ L+++M +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
PD YN ++ ++G + A E+++ ME+ G TY+ +V GLC G+ +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC-CSGRWSD 227
Query: 274 ACKYFEMMVDEGIPP 288
A + MV I P
Sbjct: 228 AARLMRDMVMRDIVP 242
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 166/351 (47%), Gaps = 36/351 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E + P+IY +++++ CK +V+ A+Q+ + P TY+ L+ G +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A K+F+EM + C + +A+ L+ +C A IDEA + +M+ P +Y++
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C + ++ M+ + PN+ TY +I LC K E+A +LL +M+E+G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 180 ANPDEWSYNAILAYHCDR----------------------------------AEVNMALR 205
P+ +YNA++ +C R + V+ A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ +M + V+PD TYN ++ R G FD A + M RG P TY+ M+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K K ++EEAC F+ + +G+ P L + G +D ++ +KM
Sbjct: 509 KSK-RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 158/299 (52%), Gaps = 7/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P++ + L++ CKR ++ A + + +P +TY+ L++G
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + ++MLERK D++ +NSL++ C++GN D A+ +L M G PD ++Y+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C++ + + DS+++ + PNV Y +I CK KV+EA+ +L++M+ +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++NA++ C ++ A L +M K + P T +++ L++ G FD A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
++ M G P TY+ + C ++G+L +A M + G+ P YSS ++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYC-REGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ Y+ L+ L G + E ++++ EMLE K +I +N ++ CK GN++EA+ +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
++ G +PD F+Y+ I +C+ D+ S F+V + M N Y +I LC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++EA L +M + P +Y ++ C + AL L+ M + + P+ HTY
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ L +F++A E+ M ++G P+V TY+ +++G C K+G +E+A E+M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDAVDVVELMES 421
Query: 284 EGIPPYSST 292
+ P + T
Sbjct: 422 RKLSPNTRT 430
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 19/350 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E + P + + L+ C+ + A++ P TY+ ++ L
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD + ++ +++ + +L++ CKAG +DEAH ML +M S P++ +++
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + + M + L P V T +I +L K+ + AY +M+ G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y + +C + A ++ +M + V PD TY+ ++K +G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLC-----KKKGKLEEAC------------KYFEMMV 282
+V + M G PS T+ ++ L K+KG E C + E MV
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA-NAM 331
+ + P + + E L + +G L + E + D M+R+ + EL NA+
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 152/330 (46%), Gaps = 24/330 (7%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE----LSE 62
K S+Y LL L +V V K ++++ VG+ L
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVV--------------FKIRLLMIKSCDSVGDALYVLDL 165
Query: 63 ARKLF-DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
RK+ DE E K + I +N+LL ++ + G +DE + EM P+ ++Y+ +
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C+ ++ + + + L P+ FTY +I C+ + ++ A+++ +EM +G
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+E +Y ++ C ++ A+ L +M + P TY +++K L R A +
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ ME+ G P++ TY+V++ LC + K E+A + M+++G+ P T L N
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLC-SQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 302 GLGFL----DIIEILADKMERSTSCTIQEL 327
G + D++E++ + + T EL
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 139/316 (43%), Gaps = 21/316 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ G++P++ L+H L K A+ F T P TY+ ++ G
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A + +M E D+ ++SL++ G + A +L+ MR G EP ++
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 120 FIHAFCEAN------------------DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
I E + +V +L+ M +++ PN +Y +I +C+
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 162 NEKVEEAYQLLDEMI-ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ A ++ D M G +P E +NA+L+ C + N A +++ M +P
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ +++ L + G +R T V++++ + G+Y + +++ G+ K+G +E + F +
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV-GKQGLVEAFYELFNV 891
Query: 281 MVDEGIPPYSSTVEML 296
M G S T +L
Sbjct: 892 MEKNGCKFSSQTYSLL 907
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 172/382 (45%), Gaps = 41/382 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRG---LGD 56
M+ GI P I+ +++A CK V A F + P V TY+ L+ G LGD
Sbjct: 247 MIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD 306
Query: 57 V--------------------------------GELSEARKLFDEMLERKCPVDILAHNS 84
V G++ +A KL M+E+ VD +
Sbjct: 307 VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGV 366
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A C AG +D+A + M +G + + + I+ +C+ ++ VL SMK +N
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L P+ + YN ++ CK E +A++L DEM +G N +YN +L V AL
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL 486
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K V P+ TY +L +VG FDRA +W+ +GF S++ Y+ M+ G
Sbjct: 487 HIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
CK + KL +A + F M + G PP T L + +G L L D ER +
Sbjct: 547 CKME-KLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605
Query: 325 QELANAMRGKTGFRKSRSEETE 346
E+ N++ TG RSEE +
Sbjct: 606 TEMYNSL--ITGV--FRSEELQ 623
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 148/306 (48%), Gaps = 4/306 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
EF P+++D+ +L ++ K A FDN K P++++ + L+ L GE
Sbjct: 181 EFSFSPTVFDM--ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAF 238
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A ++++M+ DI ++ ++ A CK G +DEA ++EM EP+ +Y+ I
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLI 298
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ D+ +VL M + N TY +I+ CK ++E+A +L+ M+E+
Sbjct: 299 DGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLF 358
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
DE Y ++ +C V+ ALR+ M K + + N ++ ++G ++A EV
Sbjct: 359 VDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEV 418
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
SM+ P Y+ ++ G CK++ + +A K + M ++G+ T L L
Sbjct: 419 LVSMKDWNLKPDSYGYNTLLDGFCKQEDFI-KAFKLCDEMHNKGVNFTVVTYNTLLKNLF 477
Query: 302 GLGFLD 307
+G ++
Sbjct: 478 HVGHVE 483
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 41/319 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
GI S + L+ + + + ++ + K+ E +P V TY L+ G D G + +A
Sbjct: 601 GISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKA 660
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP----------- 112
+ +M+++ +I+ + ++ ++ + G IDEA+ +L ++ I +P
Sbjct: 661 YNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADI--DPIAAHAHSVELP 718
Query: 113 -------------DAFS-------------YSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
D+F Y+I I C++ +I V R+L +
Sbjct: 719 KSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFC 778
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ +TY +I KV EA+ L D+MI G P+ YNA++ C ++ A RL
Sbjct: 779 PDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
++ ++ + P TYN ++ + GR A E+ + M + G PS TYS ++HGL
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGL-Y 897
Query: 267 KKGKLEEACKYFEMMVDEG 285
+GK E++ M+ G
Sbjct: 898 MEGKSEQSVGLLNEMMKAG 916
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+K + + L++ CK HV A + + K P Y+ L+ G +
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL DEM + ++ +N+LL+ + G+++ A + M G P+ +Y
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AF + + ++ YN +I CK EK+ +A ++ +M E G
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE +Y ++ +C + AL+L ++ + YN ++ + R +
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M+ R P+V TY ++ G C KG +++A + M+D+GI P
Sbjct: 627 GLLAEMKNRELSPNVVTYGSLIAGWC-DKGMMDKAYNAYFKMIDKGIAP 674
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK----VAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M++ GI P+I +++ +L + + + HQ D P + D
Sbjct: 667 MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD-----IDPIAAHAHSVELPKSD 721
Query: 57 VGELSEARKLFDEMLERKCPVDI---LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
+ L E +K+ D ++ + I + +N + +CK+ NID+ +L ++ G PD
Sbjct: 722 LRHL-ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPD 780
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++Y IHA ++ F + D M LVPN+ YN +I LCK+ ++ A +L +
Sbjct: 781 NYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFN 840
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
++ +G +P +YN ++ +C AL L +M +E + P TY+ ++ L G
Sbjct: 841 KLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEG 900
Query: 234 RFDRATEVWESMEKRGFYPSV 254
+ +++ + M K G SV
Sbjct: 901 KSEQSVGLLNEMMKAGKGSSV 921
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M ++ +KP Y + LL CK++ A + D ++ TV TY+ L++ L VG
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH 481
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +++ M +R + + + +LL+A K G D A + ++ S G Y+
Sbjct: 482 VEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNT 541
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + + MK P+ TY +I CK + EA +L D G
Sbjct: 542 MICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDG 601
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ YN+++ E+ L+ M + P+ TY ++ G D+A
Sbjct: 602 ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAY 661
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD-EGIPPYSSTVEMLRN 298
+ M +G P++ S +V L + GK++EA + D + I ++ +VE+ ++
Sbjct: 662 NAYFKMIDKGIAPNIIIGSKIVSSL-YRHGKIDEANLILHQIADIDPIAAHAHSVELPKS 720
Query: 299 RLVGLGFLDIIEILADK 315
L L I++ K
Sbjct: 721 DLRHLETQKIVDSFGKK 737
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+R++ PDA S F A + D+ S +++ + R + V Y + LCK
Sbjct: 105 LRNLRLNPDA-SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCK 163
Query: 162 NEKVEEAYQLLDEMIE--RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
N + A + DE++ R + ++ IL ++ AL + M K +P
Sbjct: 164 NNYIASA--VWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSL 221
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ N +L LV+ G +A V+E M G P + +Y++MV+ C K+G+++EA + +
Sbjct: 222 RSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYC-KEGRVDEAFNFVK 280
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLG 304
M P T L + V LG
Sbjct: 281 EMERSCCEPNVVTYNSLIDGYVSLG 305
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF P +K+++I++ G G L++
Sbjct: 191 DYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLAD 250
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++++E++ K D+ + + + ++ K+G + A + M G PD + I
Sbjct: 251 AKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIID 310
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I + M +V TYN +I+ CK ++E+ Y+LLD+M +G +P
Sbjct: 311 QLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSP 370
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ IL +V + L+ RM K D TYN++L L V VW
Sbjct: 371 NNMTYSYILKTTEKPKDV---ISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVW 427
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+ G P ++++MVHGL KL+EA Y+ M G+ P T
Sbjct: 428 DEMERNGSGPDQRSFTIMVHGL-HSHDKLDEALHYYRTMESRGMTPEPRT 476
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT---YSILVRGLGDVGELSEARKLFDEML 71
++L L + K V++ Q FD E +V T +++L+ ++ EA +F +
Sbjct: 131 EMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRK 190
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+ +D++ LL ++C+ +++EA + + + P S++I ++ +C +
Sbjct: 191 DYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKD-EFPPVIKSWNIILNGWCVKGSLA 249
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
RV + + L P++FTY I L K+ K+ A +L M E+G NPD N I+
Sbjct: 250 DAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCII 309
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C + + AL + M D TYN ++K ++ R ++ E+ + ME +G
Sbjct: 310 DQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVS 369
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+ TYS ++ K K ++ + M G S T ++ N V + +++
Sbjct: 370 PNNMTYSYIL----KTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQL 425
Query: 312 LADKMERSTSCTIQ 325
+ D+MER+ S Q
Sbjct: 426 VWDEMERNGSGPDQ 439
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 47/244 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P + + ++ LC +K +
Sbjct: 293 MWEKGINPDVAICNCIIDQLCFKKRI---------------------------------- 318
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++F EM +R C D+ +N+L++ CK +++ + +L +M G P+ +YS
Sbjct: 319 PEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYI 378
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-DEMIERG 179
+ + D+ S ++ M++ + TYN I+ L + E+ QL+ DEM G
Sbjct: 379 LKTTEKPKDVIS---LMQRMEKSGCRLDSDTYNLIL-NLYVSWDYEKGVQLVWDEMERNG 434
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR-- 237
+ PD+ S+ ++ +++ AL M + P+ T KLLV+ R +
Sbjct: 435 SGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRT-----KLLVKAIRMKKDE 489
Query: 238 -ATE 240
ATE
Sbjct: 490 PATE 493
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ + A + A P TY+ ++RGL D G + EA
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLI--ASMPVAPDAYTYTPIIRGLCDRGRVGEAL 165
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML R C ++ + LLEA+CK+ +A +L EMR+ G P+ +Y++ I+
Sbjct: 166 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + L+ + Y P+ +Y +++ LC ++ E+ +L EM+E+ P+E
Sbjct: 226 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 285
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A++++ +M+ + N+V+ + + GR D A + +
Sbjct: 286 VTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 345
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P +Y+ ++ GLC+ + + E+A + + MV + PP T L G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404
Query: 305 FLDIIEILADKM 316
++ +L ++M
Sbjct: 405 LIEQATMLIEQM 416
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 6/323 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +PS+ LL A+CK A + D + + TP + TY++++ G+ G
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR+ + + D +++ ++L+ +C A ++ + EM P+ ++ +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC + +VL+ M + N N +I +CK +V++A+Q L+ M G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD SY +L C A L+ M ++N P+ T+N + +L + G ++AT
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M + G ++ TY+ +V+G C +G+++ A + F M P + T L
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFC-VQGRVDSALELFYSM---PCKPNTITYTTLLTG 466
Query: 300 LVGLGFLD-IIEILADKMERSTS 321
L LD E+LA+ +++ +
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCA 489
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+ +G +P +L LC K + + F + + P T+ +LVR G
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ ++M C + N ++ +CK G +D+A L M S G PD SY+
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A +L M R N PN T+N I LC+ +E+A L+++M E G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YNA++ C + V+ AL L M + P+ TY +L L R D A
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAA 477
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M ++ P+V T++V+V C+K G ++EA + E M++ G P
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQK-GLMDEAIELVEQMMEHGCTP 525
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+EA +L D R D+ L+ +C+ G +A +LR G D F+Y+
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C + + R++ SM + P+ +TY IIR LC +V EA LLD+M+ R
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +Y +L C A+ ++ M + P+ TYN+++ + R GR D A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E + GF P +Y+ ++ GLC K + E+ + F M+++ P T +ML
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAK-RWEDVEELFAEMMEKNCMPNEVTFDML 291
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L L R + A + D A P V + L+R L G S+A ++
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
VD+ A+N+L+ C+ G +D A R + S+ PDA++Y+ I C+ +
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+LD M P+V TY ++ +CK+ +A ++LDEM +G P+ +YN I+ C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
V+ A + R++ PD +Y VLK L R++ E++ M ++ P+
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
T+ ++V C + G +E A + E M G ++ ++ N + G +D
Sbjct: 287 TFDMLVRFFC-RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+ + + LC++ ++ A + ++H + TY+ LV G G
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF M C + + + +LL +C A +D A +L EM P+ ++++
Sbjct: 441 VDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + +++ M + PN+ TYN ++ + K+ EEA +LL ++ G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y++I+ V A+++ + + P YN +L L + D A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M G P+ TY ++ GL
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGL 642
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+ L + ++ EA ++ S G PD + + I C RVL + +R
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+VF YN ++ C+ +++ A +L+ M PD ++Y I+ CDR V
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL L+ M P TY ++L+ + + F +A EV + M +G P++ TY+V+++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRNRLVGLGFLDIIEILADKMERS 319
G+C ++G++++A ++ + G P + S +L+ + D+ E+ A+ ME++
Sbjct: 224 GMC-REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G + +I + L++ C + V A + F + + P TY+ L+ GL + L
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--PNTITYTTLLTGLCNAERL 473
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +L EML++ C +++ N L+ C+ G +DEA ++ +M G P+ +Y+
Sbjct: 474 DAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + +L + + P++ TY+ II L + ++VEEA ++ + + G
Sbjct: 534 LDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P YN IL C R + A+ M MP+ TY +++ L +
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653
Query: 241 VWESMEKRG 249
+ + RG
Sbjct: 654 LLRELCSRG 662
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 8/317 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P I + LL ALCK VK +H P T+++L G V + +A KL
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKL 188
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHA 123
+EM+E + + + ++ C+AG +DEA + M + G+ P A ++++ I A
Sbjct: 189 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 248
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F ++ M +P+V TY +I +C EKV+EAY+ LDEM +G PD
Sbjct: 249 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 308
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L C+ + + AL+L RM + P TYNM++ + + D A W
Sbjct: 309 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 368
Query: 244 SMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M+KR V TY M++GL C + +EAC E +V++G+ + RL
Sbjct: 369 EMDKRDCVQDVETYCAMINGLFDCHRA---KEACFLLEEVVNKGLKLPYRVFDSFLMRLS 425
Query: 302 GLGFLDIIEILADKMER 318
+G L I +++ M++
Sbjct: 426 EVGNLKAIHKVSEHMKK 442
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
K +I A N LL+A+CK G + E +LR MR +PDA ++++ +C D
Sbjct: 127 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKA 185
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---ANPDEWSYNAI 190
++L+ M P FTY I C+ V+EA L D MI +G + P ++ +
Sbjct: 186 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 245
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + LI RM +PD TY V++ + + D A + + M +G+
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 305
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P + TY+ + LC+ + K +EA K + MV+ P T ML
Sbjct: 306 PPDIVTYNCFLRVLCENR-KTDEALKLYGRMVESRCAPSVQTYNML 350
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + ++ +C + V A++F D ++ + P + TY+ +R L + +
Sbjct: 265 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL+ M+E +C P +Y++
Sbjct: 325 TDEALKLYGRMVESRCA-----------------------------------PSVQTYNM 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F E +D F M + + V +V TY +I L + +EA LL+E++ +G
Sbjct: 350 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 409
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + L LC+ + A + + + P+V+TY++L+ ++ + A
Sbjct: 304 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 363
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM +R C D+ + +++ + EA +L E+ + G + + F+
Sbjct: 364 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 423
Query: 124 FCEANDIHSVFRVLDSMKRY 143
E ++ ++ +V + MK++
Sbjct: 424 LSEVGNLKAIHKVSEHMKKF 443
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 12/328 (3%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P +Y L++A C+ V+ H FD + P + TYS+++ GL G++ EA
Sbjct: 228 IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEAL 287
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L M + D + +L++ C+ E ML EM ++G +PD +Y+ I+ F
Sbjct: 288 ELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGF 347
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ +DI F+V + M + N FTY +I LCK +E+A L EM G PD
Sbjct: 348 VKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDI 407
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + + A L+ + KEN+ + + ++ L G RA E+++
Sbjct: 408 QTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P++ Y+ +V GL K+G+ EEA K +M D+G+ P ++ V +G
Sbjct: 468 MISWGLKPNIVIYTTIVKGLV-KEGRFEEAIKILGVMKDQGLSP-----DVFCYNTVIIG 521
Query: 305 FLDIIEILADKMERSTSCTIQELANAMR 332
F A KME S ++ +A ++
Sbjct: 522 FCK-----AGKMEEGKSYLVEMIAKGLK 544
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 143/297 (48%), Gaps = 3/297 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP++Y +H C+ ++ A + F + P + L+ G G
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A F ML++ D+ H+ L+ + K G + EA G+ E+ G PD F+Y+
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ D+ + F + D M + + PN+ TYN +I LCK ++ +A +L D + E+G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ I+A +C A + A +L M V PD Y ++ + G ++A
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + G S ++ ++ G K GKL EA + E MVD I P T +L
Sbjct: 778 SLFLGMVEEGI-ASTPAFNALIDGFFKL-GKLIEAYQLVEDMVDNHITPNHVTYTIL 832
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 140/296 (47%), Gaps = 6/296 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
IK + + L+H LCK ++ A F P ++TY+ L+ G V + +A
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L E+ + + +++ +C G++ A+ + +EM S G +P+ Y+ +
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ ++L MK L P+VF YN +I CK K+EE L EMI +G P+
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y A + +C E+ A R M + P+ ++ + G +A +
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M +G P V T+SV++HGL K GKL+EA F ++D+G+ P Y+S + L
Sbjct: 608 MLDQGVLPDVQTHSVLIHGL-SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNL 662
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M GIKP I + L+ K ++++ A++ K E T +V GL G+
Sbjct: 398 MTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +LF EM+ +I+ + ++++ + K G +EA +L M+ G PD F Y+
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+A + L M L PNV+TY I C+ +++ A + EM++ G
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ ++ +C A M + V+PD T+++++ L + G+ A
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V+ + +G P V TY+ ++ LC K+G L+ A + + M +GI P T L N
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLC-KEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Query: 300 LVGLG 304
L LG
Sbjct: 697 LCKLG 701
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 7/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P ++ + ++ CK ++ + + P V TY + G GE
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Query: 60 LSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A + F EML+ P D++ + L++ CK GN +A R M G PD ++S
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTD-LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ IH + + V + LVP+VFTY +I LCK ++ A++L D+M ++
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G NP+ +YNA++ C E+ A L + ++ + + TY+ ++ + A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTVE 294
+++ M+ G P Y ++ G C K G E+A F MV+EGI P +++ ++
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCC-KAGNTEKALSLFLGMVEEGIASTPAFNALID 799
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+ P Y L+ C++K D P Y+ L+ G +
Sbjct: 293 MANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSD 352
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +EM RK ++ + +L+ +CK G++++A + EM +G +PD +Y+
Sbjct: 353 IGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNC 412
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ + +L +K+ NL N + I+ LC + A +L EMI G
Sbjct: 413 LIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWG 472
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ Y I+ A++++ M + + PD YN V+ + G+ +
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +G P+V TY +HG C + G+++ A + F M+D GI P
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYC-RAGEMQAAERSFIEMLDSGIAP 580
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 144/288 (50%), Gaps = 2/288 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ + Y +++ LC + A++ F P + Y+ +V+GL G EA
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ M ++ D+ +N+++ CKAG ++E L EM + G +P+ ++Y FIH +
Sbjct: 498 KILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGY 557
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A ++ + R M + PN +I CK+ +A+ M+++G PD
Sbjct: 558 CRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDV 617
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ ++ A+ + + + + ++PD TY ++ L + G A E+ +
Sbjct: 618 QTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDD 677
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M K+G P++ TY+ +++GLC K G++ +A + F+ + ++G+ S T
Sbjct: 678 MCKKGINPNIVTYNALINGLC-KLGEIAKARELFDGIPEKGLARNSVT 724
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 36/317 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + GI P+I + L++ LCK + A + FD + TYS ++ G
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID----------------------- 96
L+EA +LF M P D + +L++ CKAGN +
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNAL 797
Query: 97 -----------EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
EA+ ++ +M P+ +Y+I I C +I ++ M++ N+
Sbjct: 798 IDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNV 857
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+PNV TY ++ + + E + L DEM+ RG PD+ +++ ++ H AL+
Sbjct: 858 MPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALK 917
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M E V ++ Y +++ L + +V + +EK+G S++T +V
Sbjct: 918 LVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCF- 976
Query: 266 KKKGKLEEACKYFEMMV 282
+ G+ +EA + E MV
Sbjct: 977 HRAGRTDEALRVLESMV 993
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P+ L+ C ++K A Q F + K P V TY+ L+ G +G
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SE LFDEM+ R D LA + +++A K GN +A ++ +M S G Y+I
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTI 936
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ N++ V +VLD +++ ++ T ++ + + +EA ++L+ M+
Sbjct: 937 LIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSF 996
Query: 180 ANPDEWS 186
N E+S
Sbjct: 997 LNLLEFS 1003
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + ++H LC+ + + + + F P + Y+ L+ G + GE+ A K+
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ M +C ++ + L+ +CK+G ++ A + M G EP+ +Y+ I C
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ FR+L M+ LVPN +T++ +I LCK EKVEEA L ++++G +E
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C +++ A L+ +M E +PD H+Y+ ++ L R + +AT + E M
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G S TY++++ L ++ G E K F+ M+ GI P
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGS-EGPKKIFDKMIATGINP 455
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 151/304 (49%), Gaps = 2/304 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+I + L+ C ++ A + F+ + +P V+TY+ L+ GL G++ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF M+E +++ + +L++ C G++ A +L M + G P+ +++S+ I A
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + L S+ + + N Y +I LCK K++ A +L+ +MI G PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY++++ C + +++ A ++ M ++ + TY +++ LVR + ++++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P + TY+V V C ++G++E+A MVD G+ P T L L
Sbjct: 447 KMIATGINPDIVTYTVFVRSYC-EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 304 GFLD 307
G +
Sbjct: 506 GLVS 509
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ C H++ A + + + P T+S+L+ L +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ ++++ V+ + + SL++ +CK G ID A ++++M S G PDA SYS
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + +L+ M + + TY II +L + E ++ D+MI G
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y + +C+ + A +I +M V P+ TYN +++ +G +A
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+E M +G+ P+ +Y+V++ + KK
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKS 541
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 5/258 (1%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T TY+ L+ GL G + EA +F M C D + +++ +C+AG +EA +L
Sbjct: 141 TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLL 200
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
E S G EP+ Y+ I +C A ++ +V + M PNV TY +I LCK+
Sbjct: 201 EEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS 260
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
KVE A L M+E G P+ +Y A++ C+ + A RL+ M ++P+ T+
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++++ L + + + A S+ K+G + Y+ ++ GLC K GK++ A + + M+
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC-KTGKIDAADELMQKMI 379
Query: 283 DEGIPP----YSSTVEML 296
EG P YSS ++ L
Sbjct: 380 SEGFVPDAHSYSSLIDGL 397
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 143/300 (47%), Gaps = 5/300 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ + L+ ALCKR+ V+ A F + K Y+ L+ GL G++ A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M+ D +++SL++ +C+ + +A ML +M G + +Y+I I
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
++ D M + P++ TY +R C+ ++E+A ++ +M++RG P+
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ + + V+ A M + P+ +Y ++L+L+V+ D + ++W+
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551
Query: 244 SMEKRGFYPSVS---TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + S + ++++GL +KG + E +M + G P ++ M+ +
Sbjct: 552 IADMKDLQESNYDEIVWKILIYGLL-QKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEI 610
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 2/302 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++A C + A Q + H P Y+ V G G L+ A ++F M R
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C + +LL + AG + EA + MR+ PD Y+ +H CEA
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L+ PN+ YN +I C ++E A ++ + M +P+ +Y ++
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGL 257
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +V A+ L +RM + + P+ TY +++ G A + ME G P+
Sbjct: 258 CKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
T+SV++ LCK++ K+EEA + +V +G+ L + L G +D + L
Sbjct: 318 WTFSVLIDALCKRE-KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376
Query: 315 KM 316
KM
Sbjct: 377 KM 378
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGDVGELSEA 63
P + L+ LL AL + H+ F + A ++TY+ L+ G++ A
Sbjct: 39 PPLRCLNTLLMALAR-------HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAA 91
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +L D A+ S + C+AG + A + M G AF+Y+ +H
Sbjct: 92 KQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG 151
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
A + V M+ + P+ Y ++ LC+ + EEA LL+E + G P+
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNA++ +C+ E+ AL++ M P+ TY ++ L + G+ +RA ++
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M + G P+V TY+ ++ G C +G L+ A + +M G+ P T +L + L
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQC-NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Query: 5 GIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P+I + LL+ LCK + + + + DN TP V TY+ L+ GLG
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVVTYTSLIDGLGKEKRS 353
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA KLF EM R +D + + +L+ + + G I +A + + M S G PD + S
Sbjct: 354 FEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 413
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +A I + R+ SM+ L PN Y+ +I LCK K++ A ++L +M +
Sbjct: 414 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 473
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ C +V A M + PD +TYN+++ + G D A
Sbjct: 474 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 533
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
V++ M +V TY ++ GLCK++ +L +A YF+ M + G
Sbjct: 534 VFDDMSSSRCSANVVTYGALISGLCKRR-QLTKASLYFQHMKERG 577
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 38/349 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+H LCK + + A + K F TP TY++L+ GL G++ A
Sbjct: 156 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAA 215
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA-HGMLREMRSIGAEPDAFSYSIFIH 122
R FDEMLE C D+ +N L+ CKAGN D A H + +E G D +Y+ +
Sbjct: 216 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVD 275
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ I +++ + P + TYN ++ LCK ++EEA LL ++++ G P
Sbjct: 276 WLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 335
Query: 183 DEWSYNAIL--------AYHCDRAEVNMALRLIT-------------------------- 208
D +Y +++ ++ + MALR +
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 395
Query: 209 -RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
MT +PD T + ++ L + GR A +++SME RG P+ YS ++HGLCK
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 455
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ K++ A + M P + T +L + L G ++ D+M
Sbjct: 456 R-KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 503
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 145/308 (47%), Gaps = 9/308 (2%)
Query: 5 GIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P+I + LL+ LCK + + + + DN TP V TY+ L+ GLG
Sbjct: 16 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVVTYTSLIDGLGKEKRS 72
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA KLF EM R +D + + +L+ + + G I +A + + M S G PD + S
Sbjct: 73 FEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 132
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +A I + R+ SM+ L PN Y+ +I LCK K++ A ++L +M +
Sbjct: 133 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 192
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT- 239
PD +YN ++ C +V A M + PD +TYN+++ + G D A+
Sbjct: 193 TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASH 252
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + G + TY+ +V L K K K+EEA E + G P +T L N
Sbjct: 253 SLAQETTINGCTIDIHTYTAIVDWLAKNK-KIEEAVALMEKITANGCTPTIATYNALLNG 311
Query: 300 LVGLGFLD 307
L +G L+
Sbjct: 312 LCKMGRLE 319
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 38/318 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ------------------------FFDNA 36
M+E G KP +Y + L+ CK + A N
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281
Query: 37 KHE-------------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
K E TPT+ TY+ L+ GL +G L EA L ++++ C D++ +
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
SL++ + K EA+ + +EM G D Y+ I + I V +M +
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 401
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
VP+V T + +I L K ++ A ++ M RG P+E Y+A++ C +++ A
Sbjct: 402 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 461
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L ++ +M K PD TYN+++ L + G + A ++ M + G P V TY++++ G
Sbjct: 462 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 521
Query: 264 LCKKKGKLEEACKYFEMM 281
C K G + AC F+ M
Sbjct: 522 FC-KAGNTDAACGVFDDM 538
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 1/249 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ EA L +++ C I +N+LL +CK G ++EA +LR++ G PD +Y+
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + +++ M L + Y +IR+L + K+ +A + M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD + + ++ + A+R+ M + P+ Y+ ++ L + + D A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+ M+K P TY+V++ GLC K G +E A +F+ M++ G P T +L +
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLC-KSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 299 RLVGLGFLD 307
G D
Sbjct: 240 GFCKAGNTD 248
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G KP +Y + L+ CK + A FD+ + + V TY L+ GL +
Sbjct: 503 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQ 562
Query: 60 LSEARKLFDEMLER 73
L++A F M ER
Sbjct: 563 LTKASLYFQHMKER 576
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ + A + A P TY+ ++RGL D G + EA
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLI--ASMPVAPDAYTYTPIIRGLCDRGRVGEAL 165
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML R C ++ + LLEA+CK+ +A +L EMR+ G P+ +Y++ I+
Sbjct: 166 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + L+ + Y P+ +Y +++ LC ++ E+ +L EM+E+ P+E
Sbjct: 226 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 285
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A++++ +M+ + N+V+ + + GR D A + +
Sbjct: 286 VTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 345
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P +Y+ ++ GLC+ + + E+A + + MV + PP T L G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404
Query: 305 FLDIIEILADKM 316
++ +L ++M
Sbjct: 405 LIEQATMLIEQM 416
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 6/323 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +PS+ LL A+CK A + D + + TP + TY++++ G+ G
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR+ + + D +++ ++L+ +C A ++ + EM P+ ++ +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC + +VL+ M + N N +I +CK +V++A+Q L+ M G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD SY +L C A L+ M ++N P+ T+N + +L + G ++AT
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M + G ++ TY+ +V+G C +G+++ A + F M P + T L
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFC-VQGRVDSALELFYSM---PCKPNTITYTTLLTG 466
Query: 300 LVGLGFLD-IIEILADKMERSTS 321
L LD E+LA+ +++ +
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCA 489
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+ +G +P +L LC K + + F + + P T+ +LVR G
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ ++M C + N ++ +CK G +D+A L M S G PD SY+
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A +L M R N PN T+N I LC+ +E+A L+++M E G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YNA++ C + V+ AL L M + P+ TY +L L R D A
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAA 477
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M ++ P+V T++V+V C+K G ++EA + E M++ G P
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQK-GLMDEAIELVEQMMEHGCTP 525
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+EA +L D R D+ L+ +C+ G +A +LR G D F+Y+
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C + + R++ SM + P+ +TY IIR LC +V EA LLD+M+ R
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +Y +L C A+ ++ M + P+ TYN+++ + R GR D A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E + GF P +Y+ ++ GLC K + E+ + F M+++ P T +ML
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAK-RWEDVEELFAEMMEKNCMPNEVTFDML 291
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L L R + A + D A P V + L+R L G S+A ++
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
VD+ A+N+L+ C+ G +D A R + S+ PDA++Y+ I C+ +
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+LD M P+V TY ++ +CK+ +A ++LDEM +G P+ +YN I+ C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
V+ A + R++ PD +Y VLK L R++ E++ M ++ P+
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
T+ ++V C + G +E A + E M G ++ ++ N + G +D
Sbjct: 287 TFDMLVRFFC-RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+ + + LC++ ++ A + ++H + TY+ LV G G
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF M C + + + +LL +C A +D A +L EM P+ ++++
Sbjct: 441 VDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + +++ M + PN+ TYN ++ + + EEA +LL ++ G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y++I+ V A+++ + + P YN +L L + D A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+ + M G P+ TY ++ GL
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGL 642
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+ L + ++ EA ++ S G PD + + I C RVL + +R
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+VF YN ++ C+ +++ A +L+ M PD ++Y I+ CDR V
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
AL L+ M P TY ++L+ + + F +A EV + M +G P++ TY+V+++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYS-STVEMLRNRLVGLGFLDIIEILADKMERS 319
G+C ++G++++A ++ + G P + S +L+ + D+ E+ A+ ME++
Sbjct: 224 GMC-REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 2/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G + +I + L++ C + V A + F + + P TY+ L+ GL + L
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--PNTITYTTLLTGLCNAERL 473
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +L EML++ C +++ N L+ C+ G +DEA ++ +M G P+ +Y+
Sbjct: 474 DAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + +L + + P++ TY+ II L + ++VEEA ++ + + G
Sbjct: 534 LDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P YN IL C R + A+ M MP+ TY +++ L +
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653
Query: 241 VWESMEKRG 249
+ + RG
Sbjct: 654 LLRELCSRG 662
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + ++H LC+ + + + + F P + Y+ L+ G + GE+ A K+
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ M +C ++ + L+ +CK+G ++ A + M G EP+ +Y+ I C
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ FR+L M+ LVPN +T++ +I LCK EKVEEA L ++++G +E
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C +++ A L+ +M E +PD H+Y+ ++ L R + +AT + E M
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G S TY++++ L ++ G E K F+ M+ GI P
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGS-EGPKKIFDKMIATGINP 455
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 151/303 (49%), Gaps = 2/303 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+I + L+ C ++ A + F+ + +P V+TY+ L+ GL G++ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF M+E +++ + +L++ C G++ A +L M + G P+ +++S+ I A
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + L S+ + + N Y +I LCK K++ A +L+ +MI G PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY++++ C + +++ A ++ M ++ + TY +++ LVR + ++++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P + TY+V V C ++G++E+A MVD G+ P T L L
Sbjct: 447 KMIATGINPDIVTYTVFVRSYC-EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 304 GFL 306
G +
Sbjct: 506 GLV 508
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ C H++ A + + + P T+S+L+ L +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ ++++ V+ + + SL++ +CK G ID A ++++M S G PDA SYS
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + +L+ M + + TY II +L + E ++ D+MI G
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y + +C+ + A +I +M V P+ TYN +++ +G +A
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+E M +G+ P+ +Y+V++ + KK
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKS 541
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 5/258 (1%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T TY+ L+ GL G + EA +F M C D + +++ +C+AG +EA +L
Sbjct: 141 TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLL 200
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
E S G EP+ Y+ I +C A ++ +V + M PNV TY +I LCK+
Sbjct: 201 EEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS 260
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
KVE A L M+E G P+ +Y A++ C+ + A RL+ M ++P+ T+
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++++ L + + + A S+ K+G + Y+ ++ GLC K GK++ A + + M+
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC-KTGKIDAADELMQKMI 379
Query: 283 DEGIPP----YSSTVEML 296
EG P YSS ++ L
Sbjct: 380 SEGFVPDAHSYSSLIDGL 397
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 144/307 (46%), Gaps = 18/307 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ + L+ ALCKR+ V+ A F + K Y+ L+ GL G++ A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M+ D +++SL++ +C+ + +A ML +M G + +Y+I I
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
++ D M + P++ TY +R C+ ++E+A ++ +M++RG P+
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW- 242
+YN ++ + + V+ A M + P+ +Y ++L+L+V+ D + ++W
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551
Query: 243 -----------ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--- 288
E + +R + YS + LC+ +LEEA +F M + + P
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD-RLEEAKHFFMGMQNANLTPSED 610
Query: 289 -YSSTVE 294
Y+S ++
Sbjct: 611 VYTSIID 617
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 2/302 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++A C + A Q + H P Y+ V G G L+ A ++F M R
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C + +LL + AG + EA + MR+ PD Y+ +H CEA
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L+ PN+ YN +I C ++E A ++ + M +P+ +Y ++
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGL 257
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +V A+ L +RM + + P+ TY +++ G A + ME G P+
Sbjct: 258 CKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
T+SV++ LCK++ K+EEA + +V +G+ L + L G +D + L
Sbjct: 318 WTFSVLIDALCKRE-KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376
Query: 315 KM 316
KM
Sbjct: 377 KM 378
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGDVGELSEA 63
P + L+ LL AL + H+ F + A ++TY+ L+ G++ A
Sbjct: 39 PPLRCLNTLLMALAR-------HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAA 91
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +L D A+ S + C+AG + A + M G AF+Y+ +H
Sbjct: 92 KQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG 151
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
A + V M+ + P+ Y ++ LC+ + EEA LL+E + G P+
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNA++ +C+ E+ AL++ M P+ TY ++ L + G+ +RA ++
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M + G P+V TY+ ++ G C +G L+ A + +M G+ P T +L + L
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQC-NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 137/314 (43%), Gaps = 16/314 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI+ S ++ L + + + FD P + TY++ VR + G
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + +M++R +++ +N+L+ G + +A M G +P+ SY++
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 120 FIHAFCEAN------------DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
+ + + D+ + +L+ + L Y+C IR LC+ +++EE
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
A M P E Y +I+ C + AL L+ MTK +P +Y +++
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIIS 652
Query: 228 LLVRVGRFDRATEVW-ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L G F A EV+ + + K Y + + ++++GL +KG + E +M + G
Sbjct: 653 SLCEGGNFRTAKEVFGDLLLKESNYDEI-VWKILIYGLL-QKGSVAEFSSLLSVMKEHGY 710
Query: 287 PPYSSTVEMLRNRL 300
P ++ M+ +
Sbjct: 711 QPSNTINAMITGEI 724
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+ CK +++A FD K P+V +++ L+ G +G+
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGD 186
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M D+ ++ L+ +CK G +DEA+ + EM G P+ +++
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + + M L P++ TYN +I LCK ++++ + L+DEMI G
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ SY ++ C ++ +AL L +M +E++ D Y ++ L R GR A
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAE 366
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
++ M G P TY+++++ CKK+ + EM D +P
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVP 414
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
+ ++G++PS+ + L++ K + + +A H P V TYSIL+ GL G
Sbjct: 162 ITKWGLRPSVVSFNTLINGYIKLGDLDEGFRL-KSAMHASGAQPDVYTYSILINGLCKEG 220
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L EA +LF+EML+ + + +L+ CK +D A + ++M S G PD +Y+
Sbjct: 221 KLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYN 280
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ ++ V ++D M L P+ +Y +I CK +E A +L ++MI+
Sbjct: 281 TLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQE 340
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
D+ +Y A+++ C A +++ M + PD TY M++ + A
Sbjct: 341 SIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTA 400
Query: 239 TEVWESMEKRGFYPSVST 256
+++ M++ G P V T
Sbjct: 401 SKLLREMQRDGPVPGVVT 418
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ E+LE P + N L++ CK G + A + + G P S++ I+ +
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ +M P+V+TY+ +I LCK K++EA +L +EM++ G P+
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC +V++A+ + +M + + PD TYN ++ L + G + ++ + M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
G P +Y+ ++ G C K+G LE A + M+ E I
Sbjct: 303 IMNGLKPDKISYTTLIDGSC-KEGDLEIALELRNKMIQESI 342
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 142/326 (43%), Gaps = 27/326 (8%)
Query: 17 LHALCKRKHVKVAHQFF----------------DNAKHEFTPTVKT----------YSIL 50
LH+ C H+ HQ D+A F ++T +S L
Sbjct: 13 LHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFSGL 72
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G + +A + F + K V +LE + + +E+ G
Sbjct: 73 MIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGY 132
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I + FC+ ++ V D++ ++ L P+V ++N +I K ++E ++
Sbjct: 133 PASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFR 192
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M GA PD ++Y+ ++ C +++ A L M ++P+ T+ ++
Sbjct: 193 LKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHC 252
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ + D A E+++ M +G P + TY+ +++GLC KKG+L++ + M+ G+ P
Sbjct: 253 KNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLC-KKGELKQVHDLIDEMIMNGLKPDK 311
Query: 291 STVEMLRNRLVGLGFLDIIEILADKM 316
+ L + G L+I L +KM
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKM 337
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 159/318 (50%), Gaps = 10/318 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
+P I + LL ALCK VK +H P T+++L G V + +A KL
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPKKAMKL 188
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYSIFIHA 123
+EM++ + + + ++ C+AG +DEA + M + G+ P A ++++ I A
Sbjct: 189 LEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVA 248
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F ++ M +P+V TY +I +C KVEEAY+ LDEM +G PD
Sbjct: 249 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPD 308
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L C+ + + AL+L RM + P TYNM++ + + D A W+
Sbjct: 309 IVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWK 368
Query: 244 SMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIP-PYSSTVEMLRNRL 300
M++R + TY VM++GL C + +EAC E +V++G+ PY + L RL
Sbjct: 369 EMDERDCVQDIETYCVMINGLFDCHRA---KEACFLLEEVVNKGLKLPYRAFDSFLM-RL 424
Query: 301 VGLGFLDIIEILADKMER 318
+G L I L++ M++
Sbjct: 425 STVGNLKAIHKLSEHMKK 442
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
K +I A N LL+A+CK G + E +LR MR +PDA ++++ +C D
Sbjct: 127 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDATTFNVLFFGWCRVRDPKKA 185
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---ANPDEWSYNAI 190
++L+ M + P FTY I C+ V+EA L + MI +G + P ++ +
Sbjct: 186 MKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALM 245
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + LI RM +PD TY V++ + G+ + A + + M +G+
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGY 305
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P + TY+ + LC+ + K +EA K + MV+ P T ML
Sbjct: 306 PPDIVTYNCFLRVLCENR-KSDEALKLYGRMVESRCAPSVQTYNML 350
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + ++ +C V+ A++F D ++ + P + TY+ +R L + +
Sbjct: 265 MISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL+ M+E +C + +N L+ + + D A +EM D +Y +
Sbjct: 325 SDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKEMDERDCVQDIETYCV 384
Query: 120 FIHAF 124
I+
Sbjct: 385 MINGL 389
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + L LC+ + A + + + P+V+TY++L+ ++ + A
Sbjct: 304 GYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 363
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM ER C DI + ++ + EA +L E+ + G + ++ F+
Sbjct: 364 FNTWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFLMR 423
Query: 124 FCEANDIHSVFRVLDSMKRY 143
++ ++ ++ + MK++
Sbjct: 424 LSTVGNLKAIHKLSEHMKKF 443
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 180/383 (46%), Gaps = 54/383 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G+ P++ L++++CK ++ A +FFD P +TY+ ++ G G
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ +EM I+ +N+L+ C G ++EA G+L++M G PD SYS
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F ++ F++ M +++P+ TY+ +I+ LC+ ++ EA + EM+
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y ++ +C ++N AL L M ++ +PD TYN+++
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL+++ G D A +V+ESM +
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKN 413
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF-LDI 308
P+ + Y+V++HG C + G + +A K ++ MV P++ TV L L G ++
Sbjct: 414 HKPNEAIYNVIIHGHC-RIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGEL 472
Query: 309 IEILADKMERSTSCTIQELANAM 331
E++ D + RS T EL+ +
Sbjct: 473 NEVIGDIL-RSCKLTDAELSKVL 494
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + ++ CK K A F + P + T+++++ GL G L E
Sbjct: 13 GCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ EM + D + +N+L+ CK GN +A + EM G P+ +Y+ I++
Sbjct: 73 SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINS 132
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ D M L PN TY II + ++EAY++L+EM G P
Sbjct: 133 MCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS 192
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ HC + A+ L+ M + V+PD +Y+ ++ R DRA ++
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKV 252
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + P TYS ++ GLC+++ +L EAC F+ M+ +PP T L N
Sbjct: 253 EMIGKSVLPDAVTYSSLIQGLCEQR-RLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKE 311
Query: 304 GFLDIIEILADKM 316
G L+ L D+M
Sbjct: 312 GDLNKALHLHDEM 324
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ F EM C +++ +N++++ CK DEA G LR M G EP+ ++++ I+
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + VL M R VP+ TYN ++ CK +A L EM+ G +P+
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +++ C +N A+ +M + P+ TY ++ + G D A V
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
M + GF PS+ TY+ +++G C G++EEA + MV +G+ P YS+ +
Sbjct: 184 MTRSGFIPSIVTYNALINGHC-VLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 17/308 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P + ++ + + + A Q + P TYS L++GL +
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +F EML K P D + +L+ A CK G++++A + EM G PDA +Y++
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE---------------K 164
I+ + R+L + + +P+ TYN +I C E
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGL 398
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
++EA Q+ + MI + P+E YN I+ HC V A +L M + +P T
Sbjct: 399 MDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++K L G EV + + V+V + +K+G ++ M +
Sbjct: 459 LVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVE-INQKEGNMDMVFNLLTEMAKD 517
Query: 285 GIPPYSST 292
G+ P + T
Sbjct: 518 GLIPSTGT 525
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 4/290 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+P + L++ LCK V A F A P TY+ LV GL L AR
Sbjct: 93 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 152
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ E +R D++ +N+L+ A+ + G +DEA +M G P S++ I
Sbjct: 153 AVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 212
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A + V + M + PN+ TY+ +I LCK+++++EA QLLD M+ G PD
Sbjct: 213 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 272
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ ++ AL L+ RM + +PD TY +V+ L +VGR D A E++
Sbjct: 273 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 332
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTV 293
+ P+V TYS ++ G C+ +++E K EM + Y++ +
Sbjct: 333 LVANKCSPNVVTYSALIGGYCRAS-RVDEGGKVMREMACRPNVVTYNTMI 381
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 29 AHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEA 88
A Q F + + TY++L+RG + +L A L EM + + +L+
Sbjct: 10 ALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQG 69
Query: 89 MCKAGNIDEAHGMLREMRSIG-AEPDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLV 146
+C+ G + +A + A+PD SY+ I+ C+ + + F + M
Sbjct: 70 LCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCR 129
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
PN FTYN ++ LCK ++++ A ++ E +R PD +YN ++A V+ AL
Sbjct: 130 PNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT 189
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
T+MT+E +P ++N ++ L R R A EV+ M R F+P++ TYSV++ GLCK
Sbjct: 190 FTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 249
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
+L+EA + + MV EG P
Sbjct: 250 SD-QLDEAQQLLDRMVSEGCRP 270
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P++ + ++ LC+ + + A + F+ +F P + TYS+++ GL +
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA++L D M+ C D++A+ L+ AG +D A G+LR M S G PD +Y++
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 120 FIHAFCEA---NDIHSVFRVLDS-----------------------------MKRYNLVP 147
I C+ +D H +FR L + M+ P
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRP 372
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
NV TYN +I L ++ EEAY + EM E G PD +Y +
Sbjct: 373 NVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 39/265 (14%)
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL----------- 137
M +AG+ ++A + RE + +Y++ I FC A+D+ + F +L
Sbjct: 1 MVRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 138 -------------------------DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
S++ + P+V +Y +I LCK +V+ A+ L
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 173 DEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
+M+ G P+ ++YNA++ C + ++ A +IT K + PD TYN ++ L +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
+GR D A + M + G+ P++ +++ ++ GLC+ + +L +A + F M+D P
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR-RLADALEVFNEMIDRDFHPNLV 238
Query: 292 TVEMLRNRLVGLGFLDIIEILADKM 316
T ++ + L LD + L D+M
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRM 263
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 33/192 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ P++ ++ LCK + A Q D E P + Y+ LV G G
Sbjct: 228 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 287
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L M+ + C D++ + +++ +CK G +D+AH + RE+ + P+ +YS
Sbjct: 288 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 347
Query: 120 FIHAFCEANDIHSVFRVLDSMK------RYN--------------------------LVP 147
I +C A+ + +V+ M YN VP
Sbjct: 348 LIGGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 407
Query: 148 NVFTYNCIIRKL 159
+ TY + R L
Sbjct: 408 DARTYRGLKRAL 419
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 1/269 (0%)
Query: 13 LDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L L+ LCK KH K +F F +T + L+ GL + G+L EA ++ E+L
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 521
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
R C +D +++N+L+ C +DEA L EM G +PD ++YSI I N +
Sbjct: 522 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 581
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ D KR ++P+V+TY+ +I CK E+ EE + DEM+ + P+ YN ++
Sbjct: 582 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 641
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C ++MAL L M + + P+ TY ++K + + R + A ++E M G
Sbjct: 642 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 701
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
P+V Y+ ++ G K ++ C EM
Sbjct: 702 PNVFHYTALIDGYGKLGQMVKVECLLREM 730
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y ++A CK V+ A + F + P V T++ ++ GLG G EA
Sbjct: 244 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 303
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++M+ER ++ ++ L++ + +A I +A+ +L+EM G P+ Y+ I +
Sbjct: 304 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 363
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F EA ++ + D M L TYN +I+ CKN + + A +LL EM+ G N +
Sbjct: 364 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 423
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ S+ +++ C + ALR + M N+ P ++ L + G+ +A E+W
Sbjct: 424 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 483
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+GF T + ++HGLC + GKL+EA
Sbjct: 484 QFLNKGFVVDTRTSNALLHGLC-EAGKLDEA 513
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ L + K + A+ + K F P V Y+ L+ + G
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A ++ D M+ + + +N+L++ CK G D A +L+EM SIG + S++
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVP-------------------------------- 147
I C S R + M N+ P
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489
Query: 148 ---NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ T N ++ LC+ K++EA+++ E++ RG D SYN +++ C + +++ A
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K + PD +TY++++ L + + + A + W+ ++ G P V TYSVM+ G
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + + EE ++F+ M+ + + P
Sbjct: 610 CKAE-RTEEGQEFFDEMMSKNVQP 632
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ C +K + A F D K P TYSIL+ GL ++ ++ EA + +D+
Sbjct: 533 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 592
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
D+ ++ +++ CKA +E EM S +P+ Y+ I A+C + +
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 652
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+ + MK + PN TY +I+ + +VEEA L +EM G P+ + Y A++
Sbjct: 653 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 712
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ ++ L+ M +NV P++ TY +++ R G A+ + M ++G P
Sbjct: 713 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 772
Query: 253 SVSTYSVMVHGLCKKKGKLE 272
TY ++G K+ G LE
Sbjct: 773 DSITYKEFIYGYLKQGGVLE 792
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+KP Y L+ L V+ A QF+D+ K P V TYS+++ G
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 614
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E ++ FDEM+ + + + +N L+ A C++G + A + +M+ G P++ +Y+
Sbjct: 615 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 674
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + M+ L PNVF Y +I K ++ + LL EM +
Sbjct: 675 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 734
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+P++ +Y ++ + V A RL+ M ++ ++PD TY
Sbjct: 735 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ ++P+ + L+ A C+ + +A + ++ KH+ +P TY+ L++G+ +
Sbjct: 625 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 684
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ LF+EM ++ + +L++ K G + + +LREM S P+ +Y++
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
I + ++ R+L+ M+ +VP+ TY I K V EA++ DE
Sbjct: 745 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+AL + + + + P + T N++L LVR F + E ++ + K G P V ++ +
Sbjct: 198 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAI 256
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERST 320
+ CK GK+EEA K F M + G+ P T + + L G D + +KM ER
Sbjct: 257 NAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 315
Query: 321 SCTIQELANAMRGKT 335
T+ + ++G T
Sbjct: 316 EPTLITYSILVKGLT 330
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 1/269 (0%)
Query: 13 LDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L L+ LCK KH K +F F +T + L+ GL + G+L EA ++ E+L
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
R C +D +++N+L+ C +DEA L EM G +PD ++YSI I N +
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ D KR ++P+V+TY+ +I CK E+ EE + DEM+ + P+ YN ++
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C ++MAL L M + + P+ TY ++K + + R + A ++E M G
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
P+V Y+ ++ G K ++ C EM
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y ++A CK V+ A + F + P V T++ ++ GLG G EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++M+ER ++ ++ L++ + +A I +A+ +L+EM G P+ Y+ I +
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F EA ++ + D M L TYN +I+ CKN + + A +LL EM+ G N +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ S+ +++ C + ALR + M N+ P ++ L + G+ +A E+W
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+GF T + ++HGLC + GKL+EA
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLC-EAGKLDEA 524
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ L + K + A+ + K F P V Y+ L+ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A ++ D M+ + + +N+L++ CK G D A +L+EM SIG + S++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVP-------------------------------- 147
I C S R + M N+ P
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 148 ---NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ T N ++ LC+ K++EA+++ E++ RG D SYN +++ C + +++ A
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K + PD +TY++++ L + + + A + W+ ++ G P V TYSVM+ G
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + + EE ++F+ M+ + + P
Sbjct: 621 CKAE-RTEEGQEFFDEMMSKNVQP 643
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ C +K + A F D K P TYSIL+ GL ++ ++ EA + +D+
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
D+ ++ +++ CKA +E EM S +P+ Y+ I A+C + +
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+ + MK + PN TY +I+ + +VEEA L +EM G P+ + Y A++
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ ++ L+ M +NV P++ TY +++ R G A+ + M ++G P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 253 SVSTYSVMVHGLCKKKGKLE 272
TY ++G K+ G LE
Sbjct: 784 DSITYKEFIYGYLKQGGVLE 803
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+KP Y L+ L V+ A QF+D+ K P V TYS+++ G
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E ++ FDEM+ + + + +N L+ A C++G + A + +M+ G P++ +Y+
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + M+ L PNVF Y +I K ++ + LL EM +
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+P++ +Y ++ + V A RL+ M ++ ++PD TY
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ ++P+ + L+ A C+ + +A + ++ KH+ +P TY+ L++G+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ LF+EM ++ + +L++ K G + + +LREM S P+ +Y++
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
I + ++ R+L+ M+ +VP+ TY I K V EA++ DE
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+AL + + + + P + T N++L LVR F + E ++ + K G P V ++ +
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAI 267
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERST 320
+ CK GK+EEA K F M + G+ P T + + L G D + +KM ER
Sbjct: 268 NAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 321 SCTIQELANAMRGKT 335
T+ + ++G T
Sbjct: 327 EPTLITYSILVKGLT 341
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 159/319 (49%), Gaps = 3/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV G+KPS+ L+ A KR+ + + + P + TY+I +R LG G
Sbjct: 220 MVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGR 279
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ M + C D++ + L++A+C AG +D+A + +M++ +PD +Y
Sbjct: 280 IDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYIT 339
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F + D+ V M+ P+V T+ ++ LCK ++EA+ LLD M ++G
Sbjct: 340 MLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG 399
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ ++ AL L M V+P +TY + + + GR D+A
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKAL 459
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E +E M+ RG P++ + ++ L + G+L EA F + G+ P S T M+
Sbjct: 460 ETFEKMKIRGIAPNIVACNASLYSL-AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKC 518
Query: 300 LVGLGFLD-IIEILADKME 317
G +D IE+L+D E
Sbjct: 519 YSKAGQVDEAIELLSDMSE 537
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
++ LCK K VA F E PT+++Y+ L+ G V A LF EM
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C D+ +N LL+A K+G I+E + +M +P+ +++I I ++N +
Sbjct: 820 GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ + + P TY ++ L K+ ++EEA +L +EM++ G P+ YN ++
Sbjct: 880 LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING 939
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
+VN A L RM +E + PD +Y ++ L GR D A +E +++ G Y
Sbjct: 940 FGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLD 999
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
Y++M+ GL + ++EEA ++ M GI P T L ++ LG ++E
Sbjct: 1000 SIAYNLMIDGLGRSH-RIEEALTLYDEMQSRGINPDLFTYNSL---ILNLGVAGMVE 1052
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 1/274 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ TY I+ +GL G L + F +M E ++ ++N L+ + ++G EA M R
Sbjct: 159 LNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYR 218
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M G +P ++S + A + D +V +L+ M+ L PN++TY IR L +
Sbjct: 219 RMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++EA +++ M + G PD +Y ++ C +++ A+ L +M + PDR TY
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYI 338
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+L G R E W ME G+ P V T++++V+ LC K G ++EA ++M
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALC-KAGNIDEAFHLLDVMRK 397
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+G+ P T L + L+ + LD L + ME
Sbjct: 398 QGVLPNLHTYNTLISGLLRVNRLDDALDLFNNME 431
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 5/301 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ ALC + A + F K P TY ++ D G+L
Sbjct: 294 GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRV 353
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ + EM D++ L+ A+CKAGNIDEA +L MR G P+ +Y+ I
Sbjct: 354 KEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISG 413
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
N + + ++M+ +VP +TY I K+ + ++A + ++M RG P+
Sbjct: 414 LLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN 473
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ NA L + + A + R+ + PD TYNM++K + G+ D A E+
Sbjct: 474 IVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLS 533
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + P + + +++ L K G+++EA K F + D + P TV + GL
Sbjct: 534 DMSENQCEPDIIVINSLINTL-YKAGRVDEAWKMFCRLKDMKLAP---TVVTYNTLIAGL 589
Query: 304 G 304
G
Sbjct: 590 G 590
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P V T++ILV L G + EA L D M ++ ++ +N+L+ + + +D+A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ M ++G P A++Y +FI + ++ + MK + PN+ N + L
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+ ++ EA + + + G PD +YN ++ + +V+ A+ L++ M++ PD
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
N ++ L + GR D A +++ ++ P+V TY+ ++ GL K+G+++ A + F
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL-GKEGQVQRAMELFA 603
Query: 280 MMVDEGIPPYSST 292
M G PP + T
Sbjct: 604 SMTGNGCPPNTIT 616
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
KP+ + ++ L K + K F+D +F+PT TY L+ GL G L EA++
Sbjct: 857 KPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKE 916
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF+EM++ C + +N L+ K G+++ A + + M G PD SY+ + C
Sbjct: 917 LFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLC 976
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
EA + + +K+ L + YN +I L ++ ++EEA L DEM RG NPD +
Sbjct: 977 EAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLF 1036
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN+++ V A +L + + P+ TYN +++ G D A V++ M
Sbjct: 1037 TYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
Query: 246 EKRGFYPSVSTYS 258
G P+ T++
Sbjct: 1097 MVGGCSPNTGTFA 1109
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G+ P+ Y + K A + F+ K P + + + L ++G
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGR 489
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+ +F+ + D + +N +++ KAG +DEA +L +M EPD +
Sbjct: 490 LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +A + +++ +K L P V TYN +I L K +V+ A +L M G
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N IL C EV++AL+++ +MT N MPD T+N ++ LV R A
Sbjct: 610 CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI 669
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++ M+K P T ++ G+ K G +E+A K E V
Sbjct: 670 WLFHQMKKM-LTPDCVTLCTLLPGVV-KNGLMEDAFKIAEDFV 710
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 166/390 (42%), Gaps = 53/390 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M E +P I ++ L++ L K V A + F K + PTV TY+ L+ GLG G+
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF M CP + + N++L+ +CK +D A ML +M ++ PD +++
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER- 178
IH + + MK+ L P+ T ++ + KN +E+A+++ ++ + R
Sbjct: 655 IIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRL 713
Query: 179 GANPDE--WS---------------------------------YNAILAYHCDRAEVNMA 203
G D W I+ C + +A
Sbjct: 714 GVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 204 LRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV- 261
+ R TKE V P +YN +++ + V + A ++ M+ G P V TY++++
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833
Query: 262 -HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME-- 317
HG K GK+ E + +E M+ P + T ++ LV LD +++ D +
Sbjct: 834 AHG---KSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890
Query: 318 -RSTSCTIQELANAMRGKTGFRKSRSEETE 346
T CT L + + + R EE +
Sbjct: 891 FSPTPCTYGPLLDGL-----LKSGRLEEAK 915
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 26/265 (9%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY-------SIFIHAFCEAND 129
V + + + L+ A K N + ++ + SI DAFSY +H N
Sbjct: 70 VAVKSSHGLVVAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNH 129
Query: 130 IHSVFR----VLDSMKRYNLVPN------VFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + R V D + +NL+ N + TY I + L + + +M E G
Sbjct: 130 MLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ + +SYN ++ AL + RM E + P T++ L+V G+ R T
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFS---ALMVATGK-RRDT 245
Query: 240 E----VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
E + E ME G P++ TY++ + L + G+++EAC+ + M D+G P T +
Sbjct: 246 ETVKSLLEEMESLGLKPNIYTYTICIRVL-GRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 296 LRNRLVGLGFLDIIEILADKMERST 320
L + L G LD L KM+ S+
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASS 329
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 6/296 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
EFG++ ++ LL LC+ KHV+ A F + KHEF +KT +I++ G +G + E
Sbjct: 224 EFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHE 283
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++ + E++E KC DI + +L+ ++ K G + A + R M G D + I
Sbjct: 284 AKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIID 343
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN- 181
A C I + M NV TYN +I+ LCK ++E+ +LL+EM ER +
Sbjct: 344 ALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSC 403
Query: 182 -PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++ +L EV + L RM + YN++L+L + +R
Sbjct: 404 WPNSVTFIYLLGSVRGPEEVPV---LFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKS 460
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W M++ G P +Y++M+HGL +KG+ ++ +YF M +GI P T +++
Sbjct: 461 TWNEMKEMGLGPDRRSYTIMIHGL-YEKGRTKDGLRYFNEMTLKGIMPEPKTEKLV 515
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
+FTP Y+ ++ LG E K+ EM +RK V+ ++ LL A ++EA
Sbjct: 156 KFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEA 215
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ + G E + ++ + C + + + S K++ V ++ T N I+
Sbjct: 216 ISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHS-KKHEFVTDIKTSNIILNG 274
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
C V EA + E+IE PD ++Y ++ + ++ AL+L M + + D
Sbjct: 275 WCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTD 334
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
N ++ L R A E+++ M +RG +V+TY+ ++ LCK
Sbjct: 335 VVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCK 382
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 60/168 (35%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G ++ + L+ LCK + ++ ++ + + + LG V
Sbjct: 361 MNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRGP 420
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E LF M C + +N +L + EM+ +G PD SY+I
Sbjct: 421 EEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIM 480
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
IH E R + M ++P T + K K ++A
Sbjct: 481 IHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVNATNVKEPKCQKA 528
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 3/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G KP I + L+ C R++V A + F+ K P V Y++L+ G
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF E+ + I ++NSL++ +C +G I +L EM PD +Y+I
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ I VL M + + PN+ TYN ++ C V A + + M++ G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ +C V+ A+ L M +N++PD +YN ++ L +GR
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ + M G P V TY++++ CK + ++A F +V EGI P
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQ-PFDKAISLFRQIV-EGIWP 577
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV + P Y + L+ ALCK + A +K P + TY+ L+ G
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR+LF+ M++R D+L +N L++ CK +DEA + +E+ + P SY+
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + I V ++LD M P+V TYN +I LCK ++ EA +L M+++G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ +C R VN+A + RM K + PD YN+++ + D A
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M + P +++Y+ ++ GLC G++ + + M D G P T +L
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLC-NLGRIPHVQELLDEMCDSGQSPDVITYNIL 551
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 16 LLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ L K +K A H + K P + YS L+ GL G +S+A L ++ ER
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+D + +NSL++ C G E +L +M +PD ++++I I A C+ I
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL M + P++ TYN ++ C E V EA +L + M++RG PD +YN ++ +
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V+ A+ L + +N++P +YN ++ L GR ++ + M P V
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY++++ LC K+G++ EA MM+ +G+ P
Sbjct: 406 VTYNILIDALC-KEGRILEALGVLVMMMKKGVKP 438
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 160/335 (47%), Gaps = 3/335 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P++ + +++ C + A F N + TY L+ GL G+
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L EM + +++ +++L++ +CK G + +A G+ ++ G DA +Y+
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C V ++L M R N+ P+ +T+N +I LCK ++ EA +L M +RG
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YNA++ +C R V+ A L RM K + PD YN+++ + D A
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + + P++++Y+ ++ GLC G++ K + M PP T +L +
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLC-NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414
Query: 300 LVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
L G L+ + +L M++ I M G
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
++P++ L+ LCK V A + TY+ L+ G VG E
Sbjct: 191 VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVT 250
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ D N L++A+CK G I EA G+L M G +PD +Y+ + +
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGY 310
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++H + + M + L P+V YN +I CK + V+EA L E+ + P
Sbjct: 311 CSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTI 370
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN+++ C+ ++ +L+ M PD TYN+++ L + GR A V
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K+G P++ TY+ M+ G C + + A F MV G+ P
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRN-NVNVAKDIFNRMVKSGLEP 473
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV P D+LL A+ + H A F + + +P++ T++IL+
Sbjct: 46 MVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSH 105
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +L+ +++ N+++ C G I +A + + + G D F+Y
Sbjct: 106 TAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGT 165
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + I + +L M++ ++ PN+ Y+ +I LCK+ V +A L ++ ERG
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN+++ C +L+T+M +ENV PD +T+N+++ L + GR A
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V M KRG P + TY+ ++ G C ++ + EA + F MV G+ P
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRE-NVHEARELFNRMVKRGLEP 333
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 151/357 (42%), Gaps = 73/357 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G++P + + + L+ CK K V A F PT+ +Y+ L+ GL + G
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------- 102
+S +KL DEM P D++ +N L++A+CK G I EA G+L
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 103 ------------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
M G EPD +Y++ I+ +C+ + + M+ N
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L+P++ +YN +I LC ++ +LLDEM + G +PD +YN +L C + A+
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 205 RLITRMTKENVMPDRHT-----------------------------------YNMVLKLL 229
L R E + PD +T Y +++ L
Sbjct: 566 SLF-RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ G F A + ME P T+ +++ G+ ++ + ++A K E M+ G+
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITFEIII-GVLLQRNETDKAEKLREEMIARGL 680
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ +A F+ M+ P + LL A+ + G+ A + +++S G P +++
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ + + F +L ++ + PN+ T+N II C N + +A ++ +
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G D+++Y ++ ++ AL L+ M K +V P+ Y+ ++ L + G A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + +RG TY+ ++ G C G+ +E + MV E + P T +L +
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCC-SVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 299 RLVGLG 304
L G
Sbjct: 274 ALCKEG 279
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 35/223 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G++P I + + L++ CK + V A F +H+ P + +Y+ L+ GL ++G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-----------RSI 108
+ ++L DEM + D++ +N LL+A CK D+A + R++ +I
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAI 585
Query: 109 -----------------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
G P+ +Y+I I+A C+ +L M+ +
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
P+ T+ II L + + ++A +L +EMI RG E S N
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLN 688
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
C+ N+D+A M + P + + A + + ++ + P++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
T+ +I A+ LL +++ G P+ ++N I+ C + AL
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ + + D+ TY ++ L + G+ A + + MEK P++ YS ++ GLC K G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC-KDG 209
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ +A + + GI + T L + +G + L KM R
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/179 (16%), Positives = 74/179 (41%), Gaps = 5/179 (2%)
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C ++ + M R P ++ ++ + + A L ++ +G +
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P ++ ++ + ++ A L+ + K P+ T+N ++ G +A +
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+++ +G+ TY +++GL K G+++ A + M + P YS+ ++ L
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGL-SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGL 205
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 38/347 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +IY L+ +++ C+ A+ K + P T++ L++GL G++SEA
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E C D++ +NS++ +C++G+ A +LR+M + D F+YS I +
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---------------------- 161
C I + + M+ + +V TYN ++R LCK
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287
Query: 162 -------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
K++EA +L EMI RG +P+ +YN ++ +C + ++ A ++
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD T+ ++K V R D +V+ ++ KRG + TYS++V G C +
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QS 406
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILAD 314
GK++ A + F+ MV G+ P T +L + L G L+ +EI D
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 453
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E +K ++ ++ +LC+ + A F + + +V TY+ LVRGL G+
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L +M+ R+ +++ N LL+ K G + EA+ + +EM + G P+ +Y+
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +LD M R P++ T+ +I+ C ++V++ ++ + +RG
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ +A L M V+PD TY ++L L G+ ++A
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++K + Y+ ++ G+CK GK+E+A F + +G+ P T ++ +
Sbjct: 449 EIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 507
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANA 330
L G L IL KME CT L A
Sbjct: 508 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 132/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + L+ C + + A+ D +++ +P + T++ L++G V
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 373
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + K+F + +R + + ++ L++ C++G I A + +EM S G PD +Y I
Sbjct: 374 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 433
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + + Y II +CK KVE+A+ L + +G
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + ++ A L+ +M ++ P+ TYN +++ +R G +
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 553
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ E M+ GF S+ +++ L
Sbjct: 554 KLIEEMKSCGFSADASSIKMVIDML 578
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 8/281 (2%)
Query: 31 QFFDNAKHEFTPTVKTYSILVR-----GLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
FF + + +F+ ++ ++ R G+ D+ + +A LF EM+ + ++ +
Sbjct: 27 SFFSSCERDFS-SISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRF 84
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
A+ + + +++ G + ++ +I I+ FC + VL + +
Sbjct: 85 FSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY 144
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+ T+N +I+ L KV EA L+D M+E G PD +YN+I+ C + ++AL
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ +M + NV D TY+ ++ L R G D A +++ ME +G SV TY+ +V GLC
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K GK + + MV I P T +L + V G L
Sbjct: 265 -KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 141/367 (38%), Gaps = 98/367 (26%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ C+ +K+A + F H P V TY IL+ GL D G+L +A ++F+++ + K
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458
Query: 75 CPVDILAHNSLLEAMCKAGNID-----------------------------------EAH 99
+ I+ + +++E MCK G ++ EA+
Sbjct: 459 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR-- 157
+LR+M G P+ +Y+ I A D+ + ++++ MK + + +I
Sbjct: 519 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Query: 158 ------------------------KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+L +EK+ + +M + N I A
Sbjct: 579 LSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEAR 638
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV----------------------- 230
+ AE+N LR + R + +R +V L+
Sbjct: 639 GMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVH 698
Query: 231 ---RVGRFDR---------ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
R GR R A E+ + M +RG P+ TYS ++ G CK+ +L+EA +
Sbjct: 699 YAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKEN-RLDEANQML 757
Query: 279 EMMVDEG 285
++MV +G
Sbjct: 758 DLMVTKG 764
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+ CK +++A FD K P+V +++ L+ G +G+
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGD 186
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M D+ ++ L+ +CK G +DEA+ + EM G P+ +++
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + + M L P++ TYN +I LCK ++++ + L+DEMI G
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ SY ++ C ++ +AL L +M +E++ D Y ++ L R GR A
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAE 366
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
++ M G P TY+++++ CKK+ + EM D +P
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 3/258 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
+ ++G++PS+ + L++ K + + +A H P V TYSIL+ GL G
Sbjct: 162 ITKWGLRPSVVSFNTLINGYIKLGDLDEGFRL-KSAMHASGAQPDVYTYSILINGLCKEG 220
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L EA +LF+EML+ + + +L+ CK +D A + ++M S G PD +Y+
Sbjct: 221 KLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYN 280
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ ++ V ++D M L P+ +Y +I CK +E A +L ++MI+
Sbjct: 281 TLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQE 340
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
D+ +Y A+++ C + A +++ M + PD TY M++ + A
Sbjct: 341 SIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTA 400
Query: 239 TEVWESMEKRGFYPSVST 256
+++ M++ G P V T
Sbjct: 401 SKLLREMQRDGPLPGVVT 418
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ E+LE P + N L++ CK G + A + + G P S++ I+ +
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ +M P+V+TY+ +I LCK K++EA +L +EM++ G P+
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC +V++A+ + +M + + PD TYN ++ L + G + ++ + M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
G P +Y+ ++ G C K+G LE A + M+ E I
Sbjct: 303 IMNGLKPDKISYTTLIDGSC-KEGDLEIALELRNKMIQESI 342
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 142/326 (43%), Gaps = 27/326 (8%)
Query: 17 LHALCKRKHVKVAHQFF----------------DNAKHEFTPTVKT----------YSIL 50
LH+ C H+ HQ D+A F ++T +S L
Sbjct: 13 LHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGL 72
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G + +A + F + K V +LE + + +E+ G
Sbjct: 73 MIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGY 132
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I + FC+ ++ V D++ ++ L P+V ++N +I K ++E ++
Sbjct: 133 PASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFR 192
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M GA PD ++Y+ ++ C +++ A L M ++P+ T+ ++
Sbjct: 193 LKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHC 252
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ + D A E+++ M +G P + TY+ +++GLC KKG+L++ + M+ G+ P
Sbjct: 253 KNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLC-KKGELKQVHDLIDEMIMNGLKPDK 311
Query: 291 STVEMLRNRLVGLGFLDIIEILADKM 316
+ L + G L+I L +KM
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKM 337
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 160/316 (50%), Gaps = 3/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E+G + + +L LCK K V++A+ F K +F +Y+I+V G +
Sbjct: 153 MHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRT 212
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A ++ EM+ER ++ +N +L +AG +EA G EM+ + D +Y+
Sbjct: 213 PKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSV 272
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH +I V + M + ++P+V T+N +I+ LCK + VE A + +EM++RG
Sbjct: 273 IHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGY 332
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +YN ++ C E+ A+ L+ RM ++ P+ TYN++++ G ++ +
Sbjct: 333 VPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLD 392
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKG--KLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M P++ TY+++++ + +K L A K MVD G P T + +
Sbjct: 393 LFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLD 452
Query: 299 RLVGLGFLDII-EILA 313
L+ G D EIL+
Sbjct: 453 GLLLTGNQDFAKEILS 468
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
++ MRS P +++I + H V SM Y ++ ++N I+ LC
Sbjct: 114 LVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLC 173
Query: 161 KNEKVEEAYQL----------------------------------LDEMIERGANPDEWS 186
K+++VE AY L L EM+ERG P+ +
Sbjct: 174 KSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTT 233
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L + + N A M K D TY V+ L VG RA V+ M
Sbjct: 234 YNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMV 293
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K G PSV+T++ ++ LCKK +E A FE MV G P S T ++ L +G +
Sbjct: 294 KDGVLPSVATFNALIQILCKKDS-VENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEM 352
Query: 307 DIIEILADKME 317
L ++ME
Sbjct: 353 QRAMELMERME 363
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 150/284 (52%), Gaps = 1/284 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI+P+++ ++ LL ++ ++ A+ FD A V TY+IL++ LG++G+++EA
Sbjct: 390 GIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEAC 449
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+++M+ + ++++N+L+ CK G +D+A+ ML+ + G +P+A +Y++ I F
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D F V + M N+ P T+N +I L K +V E L+ I++G
Sbjct: 510 FKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTS 569
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+I+ V+ AL M + + PD TY ++ L + + A E+
Sbjct: 570 ITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSD 629
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+ +G V YS ++ G CK +E A K+F ++D G+ P
Sbjct: 630 MKYKGMKLDVVAYSALIDGFCKMH-DMESASKFFTELLDIGLTP 672
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P+ + + +++ L K V +N K F T TY+ ++ G G
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGA 584
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + EM E D++ + SL++ +CK+ I A M +M+ G + D +YS
Sbjct: 585 VDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSA 644
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ +D+ S + + L PN YN +I +E A L EMI+
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y +I+ ++++AL L + M ++++PD Y +++ L G+ + A+
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENAS 764
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ + M+ PSV Y++++ G ++G L+EA + + M+D+G+ P +T ++L N
Sbjct: 765 KILKEMDGNNITPSVLVYNILIAG-NFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
++E G+KP+ L+ K+ + A F+ PT T++ ++ GLG G
Sbjct: 490 ILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGR 549
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SE + + +++ + +NS+++ K G +D A REM G PD +Y+
Sbjct: 550 VSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTS 609
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++N I + MK + +V Y+ +I CK +E A + E+++ G
Sbjct: 610 LIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIG 669
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN++++ + AL L M K V D Y ++ L++ G+ A
Sbjct: 670 LTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLAL 729
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ M + P + Y+V+++GL G+LE A K + M I P
Sbjct: 730 DLYSEMLSKDIVPDIVMYTVLINGL-SNNGQLENASKILKEMDGNNITP 777
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 41/340 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK----------------------- 37
MVE GI Y L ++ A K + +FF AK
Sbjct: 211 MVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLD 270
Query: 38 -----------HEF--TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
EF P+ TY+ ++ G EA +L DEM+ P++++ S
Sbjct: 271 LNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRS 330
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ C G+++ A + E+ G PD +S+ I+ + D+ + + MK
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMG 390
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PNVF N ++ + +E AY L DE +E G + +YN +L + + +VN A
Sbjct: 391 IQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEAC 449
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L +M + + P +YN ++ + G D+A + +S+ +RG P+ TY++++ G
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
KKG E A FE M+ I P T + N GLG
Sbjct: 510 F-KKGDSERAFVVFEQMMAANIAPTDHTFNTVIN---GLG 545
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 33/285 (11%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+H+ P V + L+ + + +AR+L+DEM+ER D + ++ A K G +
Sbjct: 178 EHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFE 237
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
E +E + G E DA +YSI + A C D++ +L M+ + VP+ TY +I
Sbjct: 238 EVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVI 297
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
K EA +L DEM+ G + +++ +C +VN+AL+L + + V+
Sbjct: 298 VACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVV 357
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK-------- 268
PD +++++ +VG ++A E++ M+ G P+V + ++ G ++
Sbjct: 358 PDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGL 417
Query: 269 -------------------------GKLEEACKYFEMMVDEGIPP 288
GK+ EAC +E MV +GI P
Sbjct: 418 FDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITP 462
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P V TY+ L+ GL ++ A ++ +M + +D++A+++L++ CK +++ A
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASK 660
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
E+ IG P+ Y+ I F N++ + + M + + ++ Y II L
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLL 720
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K K+ A L EM+ + PD Y ++ + ++ A +++ M N+ P
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVL 780
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
YN+++ R G A + + M +G P +TY ++V+G K
Sbjct: 781 VYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E GI P + L+ LCK + +A + + K++ V YS L+ G + +
Sbjct: 595 MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A K F E+L+ + + +NS++ N++ A + +EM D Y+
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + M ++VP++ Y +I L N ++E A ++L EM
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
P YN ++A + + A RL M + ++PD TY++++ ++V
Sbjct: 775 ITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G E D+ ++ + +F N I +M ++LVP V N ++ + + V +A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
QL DEM+ERG + D +T ++V++
Sbjct: 205 RQLYDEMVERG-----------------------------------IYGDCYTLHVVMRA 229
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ G+F+ + ++ + RG + YS++V +C++ L AC+ + M + G P
Sbjct: 230 CMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRL-DLNLACELLKEMREFGWVP 288
Query: 289 YSST 292
T
Sbjct: 289 SKGT 292
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++FG +P + + L++ C+ V A + F P V Y+ ++ G +G
Sbjct: 71 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A +LFD M D + +NSL+ +C +G +A ++R+M P+ +++
Sbjct: 131 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M R + P+VFTYN +I LC + +V+EA Q+LD M+ +G
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C V+ +L M + ++ D TYN +++ + GR D A
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E++ M+ R P++ TYS++++GLC ++E+A FE M
Sbjct: 311 EIFSRMDSR---PNIRTYSILLYGLC-MNWRVEKALVLFENM 348
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 5 GIKPSIYDLDQLLHALC-KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++ + L+ LC + A D + P V T++ ++ G+ SEA
Sbjct: 145 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 204
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL++EM R D+ +NSL+ +C G +DEA ML M + G PD +Y+ I+
Sbjct: 205 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 264
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + ++ M + LV + TYN II+ + + + A ++ M R P+
Sbjct: 265 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 321
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C V AL L M K + D TYN+V+ + ++G + A +++
Sbjct: 322 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 381
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
S+ +G P V +Y+ M+ G C+K+ + +++ + M ++G+ P
Sbjct: 382 SLSCKGLKPDVVSYTTMISGFCRKR-QWDKSDLLYRKMQEDGLLP 425
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D+ ++N ++ +C+ A ++ +M G EPD + S I+ FC+ N + ++
Sbjct: 44 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
M+ P+V YN II CK V +A +L D M G D +YN+++A C
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A RL+ M +++P+ T+ V+ + V+ G+F A +++E M +R P V TY
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ +++GLC G+++EA + ++MV +G P T L N
Sbjct: 224 NSLINGLC-MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 263
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D ++L + K K+ + F + + + +Y+I++ L A +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ D++ +SL+ C+ + +A ++ +M +G PD Y+ I C+
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ + D M+R + + TYN ++ LC + + +A +L+ +M+ R P+ +
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + + A++L MT+ V PD TYN ++ L GR D A ++ + M
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P V TY+ +++G CK K +++E K F M G+
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSK-RVDEGTKLFREMAQRGL 286
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 10/338 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDVG 58
E + P I +D ALCK H + A + + E + P V+ Y+IL+ G
Sbjct: 143 AEAAVSPLILTVD----ALCKEGHPRAAARLVAQVRREDGGWAPDVRVYNILLNGWSRAR 198
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L + KL+ M + ++ + + ++A C D+A +L +MR G + + + +
Sbjct: 199 RLDKVEKLWAAMRDEGVRPTVVTYGTFIDAYCVMRRPDQAMTLLDQMREEGIQANLLTCN 258
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++A +A +VL+ Y + PN+ T+N ++ CK+ + A +L M+ R
Sbjct: 259 PIVYALAQAGRFGDAHKVLEKFPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGR 318
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P +YN + + + L +M PD+ TY++++K+L R +
Sbjct: 319 GISPTARTYNYFFMVFSRNRSIELGMNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELT 378
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ + M GF P +T ++++H LC++ EEA FE M + GI P T ML
Sbjct: 379 LQMLQEMRNNGFEPDQATSTMLIHLLCRRH-HFEEAFAEFEQMFERGIVPQYITYRMLMK 437
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTG 336
L LG + +++ LAD M T +L + R K G
Sbjct: 438 ELKRLGLVKLVQKLADLMRSVPHST--KLPGSYRDKEG 473
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V A Q + H PT Y+ L+ G V +L A
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 210
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F++M R D + +N+L+ +CK + +A ++ EM G +P +++ I A
Sbjct: 211 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 270
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + F VL M++ + +V ++ +++ CKN K+ EA +LD+MI + P+
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 330
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN+I+ + + + A L+ +M V TYN++LK L R + D A E+
Sbjct: 331 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 390
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ +G P V +Y+ ++ C KG ++A + + M GI P T L + L
Sbjct: 391 TLRNQGLRPDVVSYNTIISACC-NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449
Query: 304 GFLDIIEILADKM 316
G + +E L +M
Sbjct: 450 GRVHDMECLYQQM 462
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 135/257 (52%), Gaps = 1/257 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+P + L++ LCK + V A + K P+V+T++ L+ G G+L +
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +M ++ D+++ S+++A CK G I EA +L +M P+A Y+ I A+
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
E+ D F +++ MK + ++ TYN +++ LC++ +++EA +L+ + +G PD
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN I++ C++ + + AL L+ M K + P TY+ ++ L GR +++
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461
Query: 245 MEKRGFYPSVSTYSVMV 261
M + PS S Y +MV
Sbjct: 462 MLHKNVEPSSSIYGIMV 478
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G KP+I + LL LC+ + D A H P TYSIL GL GE
Sbjct: 77 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 136
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF E L++ + + LL +CK G + +A +L + G P Y+
Sbjct: 137 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 196
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ D+ F + + MK ++ P+ TYN +I LCK E V +A L+ EM + G
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256
Query: 180 ANP-----------------------------------DEWSYNAILAYHCDRAEVNMAL 204
+P D S+ +++ C ++ A+
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 316
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V P+ YN ++ + G ++A + E M+ G S+ TY++++ GL
Sbjct: 317 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 376
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C+ +++EA + + ++G+ P
Sbjct: 377 CRSS-QIDEAEELIYTLRNQGLRP 399
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+V G+ P+ + L++ C+ + ++ A F+ K P TY+ L+ GL +
Sbjct: 182 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 241
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L EM + + N+L++A AG +++ +L +M+ G + D S+
Sbjct: 242 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 301
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ I +LD M ++ PN YN II ++ E+A+ L+++M G
Sbjct: 302 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 361
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN +L C ++++ A LI + + + PD +YN ++ G D+A
Sbjct: 362 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 421
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
E+ + M K G P++ TY +V L G++ + ++ M+ + + P SS
Sbjct: 422 ELLQEMNKYGIRPTLRTYHTLVSALA-SAGRVHDMECLYQQMLHKNVEPSSS 472
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + ++ L + A + FD P TY+ ++ G G+L +L
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D+ML +I+ +N LL +C+AG +DE ++ EM S PD F+YSI
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++ + + ++ +T + ++ LCK+ KV +A Q+L+ ++ G P
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ +C ++ A + +M ++ PD TYN ++ L ++ +A ++ ME
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K G PSV T++ ++ G+LE+ M +GI
Sbjct: 254 KSGVDPSVETFNTLIDAY-GTAGQLEKCFTVLSDMQQKGI 292
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 1/248 (0%)
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
E P D ++N ++ + ++G +A + EM +G P+ +Y+ I + D+
Sbjct: 9 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ FR+ D M PN+ TYN ++ LC+ +++E L+DEM PD ++Y+ +
Sbjct: 69 AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
E L L K+ VM +T +++L L + G+ +A +V E + G
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEI 311
P+ Y+ +++G C+ + L A FE M I P T L N L L + E
Sbjct: 189 PTTVIYNTLINGYCQVR-DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 247
Query: 312 LADKMERS 319
L +ME+S
Sbjct: 248 LVMEMEKS 255
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 140/295 (47%), Gaps = 8/295 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P +Y++++ GL G+ S+A K+FDEM++ + + +N++++ K G+++ +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+M G +P+ +Y++ + C A + ++D M +++ P+ FTY+ + L +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ L E +++G ++ + +L C +V A +++ + ++P
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ +V A ++E M+ R P TY+ +++GLC KLE K +++
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC----KLEMVTKAEDLV 249
Query: 282 VD---EGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMR 332
++ G+ P T L + G L+ +L+D ++ + + ++
Sbjct: 250 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 304
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ + P+ + ++ A + + A + K+ + ++ TY++L++GL +
Sbjct: 322 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 381
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L + + D++++N+++ A C G+ D+A +L+EM G P +Y
Sbjct: 382 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHT 441
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A A +H + + M N+ P+ Y ++ + E + L EM E+G
Sbjct: 442 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
Query: 180 ANPDE 184
D+
Sbjct: 502 IAFDD 506
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 2/328 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V +A + + PT Y+ L+ G GEL A
Sbjct: 331 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 390
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F +M R D + +N+L+ +CKA I A +L EM+ G P +++ I A
Sbjct: 391 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 450
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F VL M+ L PNV +Y I+ CKN K+ EA +LD+M + P+
Sbjct: 451 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 510
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNAI+ + + + A L+ +M + P TYN+++K L + A E+
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 570
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ P +Y+ ++ C +G +++A + M GI T L + L G
Sbjct: 571 SLSNHRLIPDAVSYNTLISACC-YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGA 629
Query: 304 GFLDIIEILADKMERSTSCTIQELANAM 331
G L +E L KM ++ + N M
Sbjct: 630 GRLIEMEYLYQKMMQNNVVPSNAIHNIM 657
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 41/373 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + LL LC+ + D A + P TYSIL GL G+
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF + L+ + + LL +CK G + A +L+ + + G P Y+
Sbjct: 317 SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ ++ F MK ++ P+ TYN +I LCK E++ A LL EM + G
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436
Query: 180 ANP---------DEW--------------------------SYNAILAYHCDRAEVNMAL 204
NP D + SY +I+ C ++ A+
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V+P+ YN ++ V G D+A + E M+ G PS+ TY++++ GL
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME----RST 320
C + ++ EA + + + + P + + L + G +D L +M +ST
Sbjct: 557 CNQS-QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 615
Query: 321 SCTIQELANAMRG 333
T +L + + G
Sbjct: 616 VRTYHQLISGLGG 628
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 7/265 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF----DNAKHEFTPTVKTYSILVRGLGDVGELS 61
IKP + L++ LCK + + A DN PTV+T++ L+ G G+L
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNG---VNPTVETFNTLIDAYGRTGQLE 458
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ + EM E +++++ S++ A CK G I EA +L +M P+A Y+ I
Sbjct: 459 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 518
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A+ E F +++ MK + P++ TYN +I+ LC ++ EA ++++ +
Sbjct: 519 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 578
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SYN +++ C R ++ AL L RM K + TY+ ++ L GR +
Sbjct: 579 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYL 638
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCK 266
++ M + PS + +++MV K
Sbjct: 639 YQKMMQNNVVPSNAIHNIMVEAYSK 663
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 37/348 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + + ++ + + A + FD + P TY+ ++ G G+L L
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY--------- 117
D+M+ + + +N LL +C+AG + E +L EM S PD F+Y
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313
Query: 118 --------------------------SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
SI ++ C+ + VL S+ LVP
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I C+ ++E A+ +M R PD +YNA++ C + A L+ M
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
V P T+N ++ R G+ ++ V M++ G P+V +Y +V+ C K GK+
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC-KNGKI 492
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
EA + M + + P + + + V G D IL +KM+ +
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 540
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 24 KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM-LERKCPVDILAH 82
+H V F A P ++ V+ G+L EA + M + P + ++
Sbjct: 140 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 199
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N ++ M +AG +A + EM P+ +Y+ I + D+ + F + D M
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ L PN TYN ++ LC+ ++ E LLDEM + PD ++Y+ + +
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
L L + K V +T +++L L + G+ A EV +S+ G P+ Y+ +++
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G C + G+LE A F M I P T L N L
Sbjct: 380 GYC-QTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--------------------- 39
M E G+KP++ +++A CK + A D+ H+
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526
Query: 40 ---------------FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
+P++ TY++L++GL + ++SEA ++ + + + D +++N+
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 586
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A C GNID+A + + M G + +Y I A + + + M + N
Sbjct: 587 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNN 646
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+VP+ +N ++ K +A L EM+++ N D+
Sbjct: 647 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDD 686
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ PS+ + L+ C+ ++ A + + P +TY+ L+ G
Sbjct: 380 MMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L +MLE K ++ +NSL+ CKAG+ D A+ +L ++ G PD ++YS+
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C++ + + +S+K + N Y +I CK K++EA LL+ M
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED 559
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ C +V L ++ M+K V P TY ++++ ++R G FD A
Sbjct: 560 CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN 619
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V+ M G P V TY+ +H C G ++EA M++ G+ P S T +L +
Sbjct: 620 RVFNQMVSFGHKPDVYTYTAFIHTYC-TSGNVKEAEGMMARMIEAGVMPDSLTYTLLISA 678
Query: 300 LVGLGF 305
LG
Sbjct: 679 YERLGL 684
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
+ + G+ P + L+ C+ V A++ F+ ++ + +Y+ ++ GL + G
Sbjct: 240 IFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGR 299
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E LF +M E C + + ++ A+ E + EMR EP+ +Y++
Sbjct: 300 IDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + R+L+ M LVP+V TYN +IR C+ ++E A ++L M
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ R V+ A+ L+++M + + P TYN ++ + + G FD A
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++ + +++ G P TYSV + LCK K ++EEAC F + ++GI
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSK-RMEEACDLFNSLKEKGI 525
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++H LC+ + F + + PTV+TY++++ L E LF+EM ER
Sbjct: 290 IIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS 349
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C ++ + +++AMCK +DE+ +L EM G P +Y+ I +CE I +
Sbjct: 350 CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAAL 409
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M+ N PN TYN +I K + V +A LL +M+E P +YN+++
Sbjct: 410 EILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQ 469
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + A +L+ + + ++PD+ TY++ + L + R + A +++ S++++G +
Sbjct: 470 CKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANE 529
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
Y+ ++ G C K GK++EA E M E P SST L
Sbjct: 530 VMYTALIDGHC-KAGKIDEAISLLERMHSEDCLPNSSTYNSL 570
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E + PS+ + L+H CK H A++ D K P TYS+ + L
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+ + E+ + + + +L++ CKAG IDEA +L M S P++ +Y+
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + ++++M + + P V TY +I ++ + + A ++ ++M+ G
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y A + +C V A ++ RM + VMPD TY +++ R+G A
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAF 689
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
V + M G PS ++ ++
Sbjct: 690 NVLKRMLDAGCDPSHPIWNNLI 711
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 28/296 (9%)
Query: 28 VAHQFFDN---AKHEFTPTVKTYSILVR-----GLGDVGE------------LSEARKLF 67
+A QFF++ K F TVK++S L++ L VGE + + R L
Sbjct: 101 IALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLL 160
Query: 68 DEMLER-------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
D + + K + + ++N LL + + IDE + EM + P+ ++ +
Sbjct: 161 DFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTM 220
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++A+ + +I + + + L P+ FTY +I C+N V AY++ + M +G
Sbjct: 221 VNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGC 280
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+E SY I+ C+ ++ + L +M +++ P TY +++ L R +
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMD 340
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M +R P+V TY+VMV +CK++ KL+E+ + M+++G+ P T L
Sbjct: 341 LFNEMRERSCEPNVHTYTVMVDAMCKER-KLDESRRILNEMMEKGLVPSVVTYNAL 395
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E GIK + L+ CK + A + E P TY+ L+ G+ G++
Sbjct: 522 EKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQ 581
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E + + M + + + L+E M + G+ D A+ + +M S G +PD ++Y+ FI
Sbjct: 582 EGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFI 641
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H +C + ++ ++ M ++P+ TY +I + +A+ +L M++ G +
Sbjct: 642 HTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCD 701
Query: 182 PDEWSYNAILAY 193
P +N ++ Y
Sbjct: 702 PSHPIWNNLIWY 713
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
+ +P I + LL ALCK VK +H P T+++L G V +
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYS 118
+A KL +EM+E + + + ++ C+AG +DEA + M + G+ P A +++
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I A + + F ++ M +P+V TY +I +C EKV+EAY+ LDEM +
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C+ + + AL+L RM + P TYNM++ + + D A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W M+KR V TY M++GL C + +EAC E +V++G+ +
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRA---KEACFLLEEVVNKGLKLPYRVFDSF 522
Query: 297 RNRLVGLGFLDIIEILADKMER 318
RL +G L I +++ M++
Sbjct: 523 LMRLSEVGNLKAIHKVSEHMKK 544
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + ++ +C + V A++F D ++ + P + TY+ +R L + +
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL+ M+E +C P +Y++
Sbjct: 427 TDEALKLYGRMVESRCA-----------------------------------PSVQTYNM 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F E +D F M + + V +V TY +I L + +EA LL+E++ +G
Sbjct: 452 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + L LC+ + A + + + P+V+TY++L+ ++ + A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM +R C D+ + +++ + EA +L E+ + G + + F+
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 525
Query: 124 FCEANDIHSVFRVLDSMKRY 143
E ++ ++ +V + MK++
Sbjct: 526 LSEVGNLKAIHKVSEHMKKF 545
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 7/322 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + L++ LC +K + A + +NA K FTPTV T++ L+ G + +A
Sbjct: 238 GCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 296
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ ++M+ KC +D+ L+ ++ K + EA +L E+ + G P+ +Y+ I
Sbjct: 297 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 356
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + VL M+R PN +TYN ++ L K++K+ +A LL +M + G P+
Sbjct: 357 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 416
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD + + A RL M + + PD H Y ++ L + G RA E +
Sbjct: 417 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYS 473
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ ++G + Y+ ++ G K G + A E M+DEG P S T +L + L
Sbjct: 474 FIVRKGVALTKVYYTTLIDGF-SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 532
Query: 304 GFLDIIEILADKME-RSTSCTI 324
L+ + D+M R CTI
Sbjct: 533 KRLNEALPILDQMSLRGIKCTI 554
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 149/368 (40%), Gaps = 85/368 (23%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + + L++ L K K + A K P V TY+ L++G D + A
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 436
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG----------------------- 100
+LF+ M + D A+ L +A+CKAG +EA+
Sbjct: 437 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSK 496
Query: 101 ---------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
++ M G PD+++YS+ +HA C+ ++ +LD M + +F
Sbjct: 497 AGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA 556
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I ++ + K + A ++ +EM G P +Y + +C + A LI +M
Sbjct: 557 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 616
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRA--------------------------------- 238
+E V PD TYN+++ +G DRA
Sbjct: 617 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 676
Query: 239 ------TEVW------------ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ +W E M K G P+V+TYS ++ G C K G+LEEAC +
Sbjct: 677 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFC-KAGRLEEACLLLDH 735
Query: 281 MVDEGIPP 288
M +G+ P
Sbjct: 736 MCGKGLSP 743
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 18/339 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P Y LLHALCK+K + A D + T+ Y+IL+ + G+
Sbjct: 510 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+++++EM + + + CK G +++A ++ +M G PD +Y+I
Sbjct: 570 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 629
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE---------------- 163
I I F L M + PN +TY +++ L K
Sbjct: 630 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI 689
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++ +QLL+ M++ G NP +Y++++A C + A L+ M + + P+ Y
Sbjct: 690 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYT 749
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++K F++A M + GF P + +Y ++V GLC +G E+ F +++
Sbjct: 750 LLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC-NEGDFEKVKSLFCDLLE 808
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
G ++L + L+ G++DI + ME+ C
Sbjct: 809 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCC 847
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 38/340 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G + + Y L+ LC K V+ A F K + +P V+ ++ L+ GL G
Sbjct: 129 MPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 188
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR LFD M + ++ +N+++ K G +++A + M G PD ++Y+
Sbjct: 189 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNT 248
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC------------------- 160
I+ C+ +L++ + P V T+ +I C
Sbjct: 249 LIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 307
Query: 161 ----------------KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
K ++++EA +LL+E+ G P+ +Y +I+ +C +V++AL
Sbjct: 308 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 367
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++ P+ TYN ++ LV+ + +A + M+K G P+V TY+ ++ G
Sbjct: 368 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 427
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
C + + A + FEMM G+ P +L + L G
Sbjct: 428 CDEH-DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 466
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 36/336 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G+ P + ++ + CK + AH++F + P T + LV G GE
Sbjct: 59 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGE 118
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF M C + ++ L++ +C A + +A + M+ G P+ +++
Sbjct: 119 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTF 178
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + + D+M + +VP+V TYN +I K ++ +A ++ + M + G
Sbjct: 179 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 238
Query: 180 ANPDEWSYNAILAYHCDRA----------------------------------EVNMALR 205
+PD+W+YN ++ CD+ + + ALR
Sbjct: 239 CHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 298
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ +M D + ++ L++ R A E+ + G P+V TY+ ++ G C
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 358
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
K GK++ A + +MM +G P + T L LV
Sbjct: 359 -KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
+A+ +P K Y+ +R L +++ ++++ D + +N+++++ CK G+
Sbjct: 26 SARLALSP--KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGD 83
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ AH R + G EP+ F+ + + +C ++ + M N ++Y
Sbjct: 84 LTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 143
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+I+ LC + V +A L M G +P+ ++ +++ C V A L M +
Sbjct: 144 LIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 203
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V+P TYN ++ ++GR + A ++ E MEK G +P TY+ +++GLC + K EEA
Sbjct: 204 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ--KTEEA 261
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRN 298
+ V EG P T L N
Sbjct: 262 EELLNNAVKEGFTPTVVTFTNLIN 285
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 19/280 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G KPS +++ CK ++ A + E P V TY+IL+ G G +G
Sbjct: 580 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 639
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-----------------DEAHGML 102
+ A M+ C + + LL+ + K GN+ D +L
Sbjct: 640 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDITWQLL 698
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
M G P +YS I FC+A + +LD M L PN Y +I+ C
Sbjct: 699 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 758
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E+A + M E G P SY ++ C+ + L + + D +
Sbjct: 759 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 818
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
++ L++ G D ++ MEKR S TY+++ +
Sbjct: 819 KILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 858
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A++ I R + YN L+ L R + V+ + + G P TY+ M+
Sbjct: 17 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C K+G L A +YF ++++ G+ P + T L
Sbjct: 77 SYC-KEGDLTTAHRYFRLLLEGGLEPETFTCNAL 109
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 37/330 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP++ + ++ ALCK + V A+ F + + V TY+ L+ G +L EA
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------------- 102
L +EM+ + ++ +N L++A+CK G + EA +L
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 103 ------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
M +G PD SY+I I+ FC+ + + M + N+VP +
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TY+ +I LCK+ ++ + L+DEM +RG + +YN+++ C ++ A+ L +M
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKM 435
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + P T+ ++L L + GR A E ++ + +G++ V Y+VM++G C K+G
Sbjct: 436 KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC-KQGL 494
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
LEEA M + G P + T +++ N L
Sbjct: 495 LEEALTMLSKMEENGCVPNAVTFDIIINAL 524
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 2/314 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSEA 63
G +P L+ LC + V A F D + + +Y L+ G+ +G+ A
Sbjct: 124 GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGA 183
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ R ++ +N++++A+CK + EA+G+ EM + G D +Y+ I+
Sbjct: 184 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYG 243
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC A+ + +L+ M + PNV+TYN ++ LCK KV+EA +L M++ PD
Sbjct: 244 FCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPD 303
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ ++ + E+ A + M+ V PD H+Y +++ + D A +++
Sbjct: 304 VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFK 363
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++ P + TYS ++ GLC K G++ + M D GIP T L + L
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLC-KSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKN 422
Query: 304 GFLDIIEILADKME 317
G LD L +KM+
Sbjct: 423 GHLDRAIALFNKMK 436
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 152/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P + L+ L++ C + K + P T++ L++GL G++++A
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D++L + D +++ +L+ +CK G+ A ++R++ +P+ Y+ I A
Sbjct: 149 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDA 208
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + + M + +V TY +I C K++EA LL+EM+ + NP+
Sbjct: 209 LCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPN 268
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ C +V A ++ M K V PD TY+ ++ V +A V+
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M G P V +Y+++++G CK K ++EA F+ M + + P T L + L
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNK-MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 304 GFLDIIEILADKM 316
G + + L D+M
Sbjct: 388 GRISYVWDLIDEM 400
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--------------------------- 33
MV I P++Y + L+ ALCK VK A
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 34 -DNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
A+H F TP V +Y+IL+ G + EA LF EM ++ I+ ++S
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L++ +CK+G I ++ EMR G + +Y+ I C+ + + + MK
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P FT+ ++ LCK ++++A + +++ +G + D + YN ++ HC + + AL
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEAL 499
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++++M + +P+ T+++++ L + D+A ++ M RG
Sbjct: 500 TMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + +A F+ ML + I+ N +L++ K + A + + G +PD +
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+I I+ FC I F VL + + P+ T+ +I+ LC +V +A D+++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G D+ SY ++ C + A++L+ ++ P+ YN ++ L +
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ M +G V TY+ +++G C KL+EA MV + I P T +L
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIAS-KLKEAIGLLNEMVLKTINPNVYTYNIL 275
Query: 297 RNRL 300
+ L
Sbjct: 276 VDAL 279
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 7/322 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + L++ LC +K + A + +NA K FTPTV T++ L+ G + +A
Sbjct: 353 GCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ ++M+ KC +D+ L+ ++ K + EA +L E+ + G P+ +Y+ I
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + VL M+R PN +TYN ++ L K++K+ +A LL +M + G P+
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD + + A RL M + + PD H Y ++ L + G RA E +
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYS 588
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ ++G + Y+ ++ G K G + A E M+DEG P S T +L + L
Sbjct: 589 FIVRKGVALTKVYYTTLIDGF-SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647
Query: 304 GFLDIIEILADKME-RSTSCTI 324
L+ + D+M R CTI
Sbjct: 648 KRLNEALPILDQMSLRGIKCTI 669
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 149/368 (40%), Gaps = 85/368 (23%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + + L++ L K K + A K P V TY+ L++G D + A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG----------------------- 100
+LF+ M + D A+ L +A+CKAG +EA+
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSK 611
Query: 101 ---------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
++ M G PD+++YS+ +HA C+ ++ +LD M + +F
Sbjct: 612 AGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA 671
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I ++ + K + A ++ +EM G P +Y + +C + A LI +M
Sbjct: 672 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 731
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRA--------------------------------- 238
+E V PD TYN+++ +G DRA
Sbjct: 732 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 791
Query: 239 ------TEVW------------ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ +W E M K G P+V+TYS ++ G C K G+LEEAC +
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFC-KAGRLEEACLLLDH 850
Query: 281 MVDEGIPP 288
M +G+ P
Sbjct: 851 MCGKGLSP 858
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 18/339 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P Y LLHALCK+K + A D + T+ Y+IL+ + G+
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+++++EM + + + CK G +++A ++ +M G PD +Y+I
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE---------------- 163
I I F L M + PN +TY +++ L K
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI 804
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++ +QLL+ M++ G NP +Y++++A C + A L+ M + + P+ Y
Sbjct: 805 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYT 864
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++K F++A M + GF P + +Y ++V GLC +G E+ F +++
Sbjct: 865 LLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC-NEGDFEKVKSLFCDLLE 923
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
G ++L + L+ G++DI + ME+ C
Sbjct: 924 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCC 962
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 38/340 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G + + Y L+ LC K V+ A F K + +P V+ ++ L+ GL G
Sbjct: 244 MPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 303
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR LFD M + ++ +N+++ K G +++A + M G PD ++Y+
Sbjct: 304 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNT 363
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC------------------- 160
I+ C+ +L++ + P V T+ +I C
Sbjct: 364 LIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 422
Query: 161 ----------------KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
K ++++EA +LL+E+ G P+ +Y +I+ +C +V++AL
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++ P+ TYN ++ LV+ + +A + M+K G P+V TY+ ++ G
Sbjct: 483 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
C + + A + FEMM G+ P +L + L G
Sbjct: 543 CDEH-DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 36/336 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G+ P + ++ + CK + AH++F + P T + LV G GE
Sbjct: 174 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGE 233
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF M C + ++ L++ +C A + +A + M+ G P+ +++
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTF 293
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + + D+M + +VP+V TYN +I K ++ +A ++ + M + G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353
Query: 180 ANPDEWSYNAILAYHCDRA----------------------------------EVNMALR 205
+PD+W+YN ++ CD+ + + ALR
Sbjct: 354 CHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ +M D + ++ L++ R A E+ + G P+V TY+ ++ G C
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
K GK++ A + +MM +G P + T L LV
Sbjct: 474 -KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
+A+ +P K Y+ +R L +++ ++++ D + +N+++++ CK G+
Sbjct: 141 SARLALSP--KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGD 198
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ AH R + G EP+ F+ + + +C ++ + M N ++Y
Sbjct: 199 LTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 258
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+I+ LC + V +A L M G +P+ ++ +++ C V A L M +
Sbjct: 259 LIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 318
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V+P TYN ++ ++GR + A ++ E MEK G +P TY+ +++GLC + K EEA
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ--KTEEA 376
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRN 298
+ V EG P T L N
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLIN 400
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 19/280 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G KPS +++ CK ++ A + E P V TY+IL+ G G +G
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-----------------DEAHGML 102
+ A M+ C + + LL+ + K GN+ D +L
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDITWQLL 813
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
M G P +YS I FC+A + +LD M L PN Y +I+ C
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E+A + M E G P SY ++ C+ + L + + D +
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
++ L++ G D ++ MEKR S TY+++ +
Sbjct: 934 KILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM-----ALRLITRMTKENVMPDRHT 221
+++ L ++ R P ++ + +C +M A++ I R +
Sbjct: 91 DSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKC 150
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN L+ L R + V+ + + G P TY+ M+ C K+G L A +YF ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYC-KEGDLTTAHRYFRLL 209
Query: 282 VDEGIPPYSSTVEML 296
++ G+ P + T L
Sbjct: 210 LEGGLEPETFTCNAL 224
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 4/290 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+P + L++ LCK V A F A P TY+ LV GL L AR
Sbjct: 43 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ E +R D++ +N+L+ A+ + G +DEA +M G P S++ I
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A + V + M + PN+ TY+ +I LCK+++++EA QLLD M+ G PD
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 222
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ ++ AL L+ RM + +PD TY +V+ L +VGR D A E++
Sbjct: 223 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 282
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTV 293
+ P+V TYS ++ G C+ +++E K EM + Y++ +
Sbjct: 283 LVANKCSPNVVTYSALIGGYCRAS-RVDEGGKVMREMACRPNVVTYNTMI 331
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 136/265 (51%), Gaps = 3/265 (1%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+T SI+++GL G +++A + FD LE D++++ +L+ +CK G +D A + R
Sbjct: 11 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 70
Query: 104 EMRSIGA-EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+M + G P+AF+Y+ + C+ + + + V+ ++ + P+V TYN ++ L +
Sbjct: 71 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQL 130
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+V+EA +M E G P S+NAI+ C + AL + M + P+ TY
Sbjct: 131 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTY 190
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++V+ L + + D A ++ + M G P + Y+ +V G G+L+ A MV
Sbjct: 191 SVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF-SAAGRLDSALGLLRRMV 249
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLD 307
+G P T ++ ++L +G +D
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVD 274
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P++ + ++ LC+ + + A + F+ +F P + TYS+++ GL +
Sbjct: 143 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 202
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA++L D M+ C D++A+ L+ AG +D A G+LR M S G PD +Y++
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 120 FIHAFCEA---NDIHSVFRVLDS-----------------------------MKRYNLVP 147
I C+ +D H +FR L + M+ P
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRP 322
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
NV TYN +I L ++ EEAY + EM E G PD +Y +
Sbjct: 323 NVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 3/210 (1%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLD-SMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
G + + + SI + C + D S++ + P+V +Y +I LCK +V+
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 168 AYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
A+ L +M+ G P+ ++YNA++ C + ++ A +I K + PD TYN ++
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L ++GR D A + M + G+ P++ +++ ++ GLC+ + +L +A + F M+D
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR-RLADALEVFNEMIDRDF 183
Query: 287 PPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P T ++ + L LD + L D+M
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 213
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 33/192 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ P++ ++ LCK + A Q D E P + Y+ LV G G
Sbjct: 178 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L M+ + C D++ + +++ +CK G +D+AH + RE+ + P+ +YS
Sbjct: 238 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 297
Query: 120 FIHAFCEANDIHSVFRVLDSMK------RYN--------------------------LVP 147
I +C A+ + +V+ M YN VP
Sbjct: 298 LIGGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357
Query: 148 NVFTYNCIIRKL 159
+ TY + R L
Sbjct: 358 DARTYRGLKRAL 369
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 153/298 (51%), Gaps = 5/298 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSE 62
F I + LL ALC+ K+V+ A K F K+++I++ G +V G E
Sbjct: 228 FKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCNVIGSPRE 287
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +++ EM +R+ D++++ S++ KAGN+ + + +M+ +G EPD Y+ I
Sbjct: 288 ADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIF 347
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A + + ++ +M+ + PN TYN +I+ LC+ K++EA L DEM++ G +P
Sbjct: 348 ALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSP 407
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y+A EV L+ M K P TY M+++ R +FD ++W
Sbjct: 408 TIRTYHAFFRSLRTGEEV---FALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLW 464
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + G P S+Y V++HGL GKLEEA K++ M ++ + P EML+ L
Sbjct: 465 NQISENGLGPDRSSYIVLIHGLF-LNGKLEEAYKFYADMKEKQLLPDPKLDEMLQTWL 521
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E GI+P + ++ AL K +HV A + + P TY+ L++ L +
Sbjct: 330 MKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARK 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR LFDEML+ I +++ ++ + G +E +L MR +G P +Y +
Sbjct: 390 IDEARGLFDEMLQHGHSPTIRTYHAFFRSL-RTG--EEVFALLENMRKLGCHPTIDTYIM 446
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC VF++ + + L P+ +Y +I L N K+EEAY+ +M E+
Sbjct: 447 LIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQ 506
Query: 180 ANPD 183
PD
Sbjct: 507 LLPD 510
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 39/245 (15%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS---IFIHAFCEANDIHSVFRVLD 138
+++++ + K D A ++ EMR + + I I +C +D+
Sbjct: 164 YHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAINTFY 223
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-------------------------- 172
+ KR+ + + ++ LC+ + V++A L+
Sbjct: 224 AHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCNVIG 283
Query: 173 ---------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
EM +R + D SY +I++ + + +L +M + + PDR YN
Sbjct: 284 SPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYN 343
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
V+ L + A + ++ME++G P+ TY+ ++ LC+ + K++EA F+ M+
Sbjct: 344 SVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRAR-KIDEARGLFDEMLQ 402
Query: 284 EGIPP 288
G P
Sbjct: 403 HGHSP 407
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 1/269 (0%)
Query: 13 LDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L L+ LCK KH K +F F +T + L+ GL + G+L EA ++ E+L
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
R C +D +++N+L+ C +DEA L EM G +PD ++YSI I N +
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ D KR ++P+V+TY+ +I CK E+ EE + DEM+ + P+ YN ++
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C ++MAL L M + + P+ TY ++K + + R + A ++E M G
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
P+V Y+ ++ G K ++ C EM
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREM 754
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y ++A CK V+ A + F + P V T++ ++ GLG G EA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++M+ER ++ ++ L++ + +A I +A+ +L+EM G P+ Y+ I +
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F EA ++ + D M L TYN +I+ CKN + + A +LL EM+ G N +
Sbjct: 388 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 447
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ S+ +++ C + ALR + M N+ P ++ L + G+ +A E+W
Sbjct: 448 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 507
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+GF T + ++HGLC + GKL+EA
Sbjct: 508 QFLNKGFVVDTRTSNALLHGLC-EAGKLDEA 537
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ L + K + A+ + K F P V Y+ L+ + G
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A ++ D M+ + + +N+L++ CK G D A +L+EM SIG + S++
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVP-------------------------------- 147
I C S R + M N+ P
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 148 ---NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ T N ++ LC+ K++EA+++ E++ RG D SYN +++ C + +++ A
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K + PD +TY++++ L + + + A + W+ ++ G P V TYSVM+ G
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + + EE ++F+ M+ + + P
Sbjct: 634 CKAE-RTEEGQEFFDEMMSKNVQP 656
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ C +K + A F D K P TYSIL+ GL ++ ++ EA + +D+
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
D+ ++ +++ CKA +E EM S +P+ Y+ I A+C + +
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+ + MK + PN TY +I+ + +VEEA L +EM G P+ + Y A++
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ ++ L+ M +NV P++ TY +++ R G A+ + M ++G P
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796
Query: 253 SVSTYSVMVHGLCKKKGKLE 272
TY ++G K+ G LE
Sbjct: 797 DSITYKEFIYGYLKQGGVLE 816
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+KP Y L+ L V+ A QF+D+ K P V TYS+++ G
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E ++ FDEM+ + + + +N L+ A C++G + A + +M+ G P++ +Y+
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + M+ L PNVF Y +I K ++ + LL EM +
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+P++ +Y ++ + V A RL+ M ++ ++PD TY
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ ++P+ + L+ A C+ + +A + ++ KH+ +P TY+ L++G+ +
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ LF+EM ++ + +L++ K G + + +LREM S P+ +Y++
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
I + ++ R+L+ M+ +VP+ TY I K V EA++ DE
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+AL + + + + P + T N++L LVR F + E ++ + K G P V ++ +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAI 280
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERST 320
+ CK GK+EEA K F M + G+ P T + + L G D + +KM ER
Sbjct: 281 NAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 321 SCTIQELANAMRGKT 335
T+ + ++G T
Sbjct: 340 EPTLITYSILVKGLT 354
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 7/322 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + + L++ LC +K + A + +NA K FTPTV T++ L+ G + +A
Sbjct: 353 GCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ ++M+ KC +D+ L+ ++ K + EA +L E+ + G P+ +Y+ I
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + VL M+R PN +TYN ++ L K++K+ +A LL +M + G P+
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD + + A RL M + + PD H Y ++ L + G RA E +
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYS 588
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ ++G + Y+ ++ G K G + A E M+DEG P S T +L + L
Sbjct: 589 FIVRKGVALTKVYYTTLIDGF-SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647
Query: 304 GFLDIIEILADKME-RSTSCTI 324
L+ + D+M R CTI
Sbjct: 648 KRLNEALPILDQMSLRGIKCTI 669
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 149/368 (40%), Gaps = 85/368 (23%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + + L++ L K K + A K P V TY+ L++G D + A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG----------------------- 100
+LF+ M + D A+ L +A+CKAG +EA+
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSK 611
Query: 101 ---------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
++ M G PD+++YS+ +HA C+ ++ +LD M + +F
Sbjct: 612 AGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA 671
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y +I ++ + K + A ++ +EM G P +Y + +C + A LI +M
Sbjct: 672 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 731
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRA--------------------------------- 238
+E V PD TYN+++ +G DRA
Sbjct: 732 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 791
Query: 239 ------TEVW------------ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ +W E M K G P+V+TYS ++ G C K G+LEEAC +
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFC-KAGRLEEACLLLDH 850
Query: 281 MVDEGIPP 288
M +G+ P
Sbjct: 851 MCGKGLSP 858
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 18/339 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P Y LLHALCK+K + A D + T+ Y+IL+ + G+
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+++++EM + + + CK G +++A ++ +M G PD +Y+I
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE---------------- 163
I I F L M + PN +TY +++ L K
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLI 804
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++ +QLL+ M++ G NP +Y++++A C + A L+ M + + P+ Y
Sbjct: 805 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYT 864
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++K F++A M + GF P + +Y ++V GLC +G E+ F +++
Sbjct: 865 LLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC-NEGDFEKVKSLFCDLLE 923
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
G ++L + L+ G++DI + ME+ C
Sbjct: 924 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCC 962
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 153/340 (45%), Gaps = 38/340 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G + + Y L+ LC+ K V+ A F K + +P V+ ++ L+ GL G
Sbjct: 244 MPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 303
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR LFD M + ++ +N+++ K G +++A + M G PD ++Y+
Sbjct: 304 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNT 363
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC------------------- 160
I+ C+ +L++ + P V T+ +I C
Sbjct: 364 LIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSK 422
Query: 161 ----------------KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
K ++++EA +LL+E+ G P+ +Y +I+ +C +V++AL
Sbjct: 423 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++ P+ TYN ++ LV+ + +A + M+K G P+V TY+ ++ G
Sbjct: 483 EVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
C + + A + FEMM G+ P +L + L G
Sbjct: 543 CDEH-DFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 148/336 (44%), Gaps = 36/336 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+V+ G+ P + ++ + CK + AH+ F + P T + LV G GE
Sbjct: 174 LVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGE 233
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LF M C + ++ L++ +C+A + EA + M+ G P+ +++
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTF 293
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + + D+M + +VP+V TYN +I K ++ +A ++ + M + G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353
Query: 180 ANPDEWSYNAILAYHCDRA----------------------------------EVNMALR 205
+PD+W+YN ++ CD+ + + ALR
Sbjct: 354 CHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ +M D + ++ L++ R A E+ + G P+V TY+ ++ G C
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
K GK++ A + +MM +G P + T L LV
Sbjct: 474 -KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
+A+ +P K Y+ +R L +++ ++++ D + +N+++++ CK G+
Sbjct: 141 SARLALSP--KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGD 198
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ AH R + G EP+ F+ + + +C ++ + M N ++Y
Sbjct: 199 LTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 258
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+I+ LC+ + V EA L M G +P+ ++ +++ C V A L M +
Sbjct: 259 LIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 318
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V+P TYN ++ ++GR + A ++ E MEK G +P TY+ +++GLC + K EEA
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ--KTEEA 376
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRN 298
+ V EG P T L N
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLIN 400
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 19/280 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G KPS +++ CK ++ A + E P V TY+IL+ G G +G
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-----------------DEAHGML 102
+ A M+ C + + LL+ + K GN+ D +L
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDITWQLL 813
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
M G P +YS I FC+A + +LD M L PN Y +I+ C
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E+A + M E G P SY ++ C+ + L + + D +
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
++ L++ G D ++ MEKR S TY+++ +
Sbjct: 934 KILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM-----ALRLITRMTKENVMPDRHT 221
+++ L ++ R P ++ + +C +M A++ I R +
Sbjct: 91 DSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKC 150
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN L+ L R + V+ + + G P TY+ M+ C K+G L A + F ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYC-KEGDLTTAHRCFRLL 209
Query: 282 VDEGIPPYSSTVEML 296
++ G+ P + T L
Sbjct: 210 LEGGLEPETFTCNAL 224
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + ++H LC+ + + + + F P + Y+ L+ G + GE+ A K+
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ M +C ++ + L+ +CK+G ++ A + M G EP+ +Y+ I C
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ FR+L M+ LVPN +T++ +I LCK EKVEEA L ++++G +E
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C +++ A L+ +M E +PD H+Y+ ++ L R + +AT + E M
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G S TY++++ L ++ G E K F+ M+ GI P
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGS-EGPKKIFDKMIATGINP 455
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 151/303 (49%), Gaps = 2/303 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+I + L+ C ++ A + F+ + +P V+TY+ L+ GL G++ A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF M+E +++ + +L++ C G++ A +L M + G P+ +++S+ I A
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + L S+ + + N Y +I LCK K++ A +L+ +MI G PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY++++ C + +++ A ++ M ++ + TY +++ LVR + ++++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P + TY+V V C ++G++E+A MVD G+ P T L L
Sbjct: 447 KMIATGINPDIVTYTVFVRSYC-EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505
Query: 304 GFL 306
G +
Sbjct: 506 GLV 508
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ C H++ A + + + P T+S+L+ L +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ ++++ V+ + + SL++ +CK G ID A ++++M S G PDA SYS
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + +L+ M + + TY II +L + E ++ D+MI G
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y + +C+ + A +I +M V P+ TYN +++ +G +A
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+E M +G+ P+ +Y+V++ + KK
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKS 541
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 5/258 (1%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T TY+ L+ GL G + EA +F M C D + +++ +C+AG +EA +L
Sbjct: 141 TAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLL 200
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
E S G EP+ Y+ I +C A ++ +V + M PNV TY +I LCK+
Sbjct: 201 EEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKS 260
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
KVE A L M+E G P+ +Y A++ C+ + A RL+ M ++P+ T+
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++++ L + + + A S+ K+G + Y+ ++ GLC K GK++ A + + M+
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC-KTGKIDAADELMQKMI 379
Query: 283 DEGIPP----YSSTVEML 296
EG P YSS ++ L
Sbjct: 380 SEGFVPDAHSYSSLIDGL 397
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 144/307 (46%), Gaps = 18/307 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ + L+ ALCKR+ V+ A F + K Y+ L+ GL G++ A
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M+ D +++SL++ +C+ + +A ML +M G + +Y+I I
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
++ D M + P++ TY +R C+ ++E+A ++ +M++RG P+
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW- 242
+YN ++ + + V+ A M + P+ +Y ++L+L+V+ D + ++W
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551
Query: 243 -----------ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--- 288
E + +R + YS + LC+ +LEEA +F M + + P
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD-RLEEAKHFFMGMQNANLTPSED 610
Query: 289 -YSSTVE 294
Y+S ++
Sbjct: 611 VYTSIID 617
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 2/302 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++A C + A Q + H P Y+ V G G L+ A ++F M R
Sbjct: 78 LINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG 137
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C + +LL + AG + EA + MR+ PD Y+ +H CEA
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAE 197
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L+ PN+ YN +I C ++E A ++ + M +P+ +Y ++
Sbjct: 198 VLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGL 257
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +V A+ L +RM + + P+ TY +++ G A + ME G P+
Sbjct: 258 CKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPND 317
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
T+SV++ LCK++ K+EEA + +V +G+ L + L G +D + L
Sbjct: 318 WTFSVLIDALCKRE-KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376
Query: 315 KM 316
KM
Sbjct: 377 KM 378
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGDVGELSEA 63
P + L+ LL AL + H+ F + A ++TY+ L+ G++ A
Sbjct: 39 PPLRCLNTLLMALAR-------HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAA 91
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ +L D A+ S + C+AG + A + M G AF+Y+ +H
Sbjct: 92 KQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG 151
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
A + V M+ + P+ Y ++ LC+ + EEA LL+E + G P+
Sbjct: 152 LLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YNA++ +C+ E+ AL++ M P+ TY ++ L + G+ +RA ++
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M + G P+V TY+ ++ G C +G L+ A + +M G+ P T +L + L
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQC-NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 45/341 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHA-----LCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGL 54
M+ G P D+ LH L K K VK A + F K F P Y+ ++ GL
Sbjct: 215 MMAMGFVPP----DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL 270
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G EA K+ D ML + C + + L+ ++CKAG ++ A + R M + G P++
Sbjct: 271 AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
Y+ IH F ++ + + D M P+V T+ +I LCK+ E+A + +E
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+ G P+ +Y I+ V A R++ M PD TY +L ++GR
Sbjct: 391 MMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGR 450
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCK---------------------------- 266
D A ++ + ++K P++ YS +V+GLC
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC 510
Query: 267 -------KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
K G+L+EAC+ F+ MV EG P ++T +L N L
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 40/346 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P + ++ LCK + + A + F+ + P V TY+ +++GL +G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A ++ M+ C D + + LL+ CK G +DEA +L E+ + P+ YS
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 120 FIHAFCEANDIHSVF------------------------------------RVLDSMKRY 143
++ C+ + R+ M
Sbjct: 476 LVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 144 NLVPNVFTYNCIIRKLCKN--EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
P+ TYN +I LC++ +VE A+ LL ++ + G PD +Y + C EV+
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A++++ + D Y + L G+ DRA +++ M ++G P + Y ++
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+GL K K KLE+ACK+F+ M+ +G P +T L L G +D
Sbjct: 656 NGLIKVK-KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD 700
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDV 57
MV G KP + L++ LC+ + +V F D K + P TY+ L GL +
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GE+ A K+ +E R D++A+ +L +C G +D A + +EM G PDA +Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ + + + D M P V TY +++ LC V+EA+ + M+
Sbjct: 652 CCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLA 711
Query: 178 RGANPDE-WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG Y+A++ C +V+ AL+L M +P T + LVR G+ +
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCK--KKGKL 271
+A E+ + M G P +T++ ++ GL K + GKL
Sbjct: 772 KAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 158/377 (41%), Gaps = 80/377 (21%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G P LL CK + A Q D K +P ++ YS LV GL D G
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGS 485
Query: 60 LSEARKLFDEMLER-KCPVDILAHN---SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+ K D++ E+ K + L S++ +CK G +DEA + + M S G +PDA
Sbjct: 486 V---EKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542
Query: 116 SYSIFIHAFCEA--NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+Y+I I+ C + N + F +L +++ +P+ TY + LCK +V+ A ++L+
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLE 602
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
E RG N D +Y A+ C + +V+ A+ L M ++ PD Y ++ L++V
Sbjct: 603 EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVK 662
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMV-------------------------------- 261
+ + A + ++ M +G P+V+TY+ +V
Sbjct: 663 KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIY 722
Query: 262 ----HGLCK----------------------------------KKGKLEEACKYFEMMVD 283
HG CK + GK E+A + + M
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Query: 284 EGIPPYSSTVEMLRNRL 300
G PP+++T + + L
Sbjct: 783 GGSPPHAATFTAILDGL 799
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 7/296 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
KP ++ L+ LCK + A + F A P ++ +VR L + EAR
Sbjct: 186 KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR 245
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F +M + P D +A+N++++ + KAG+ EA +L M + P +Y I +++
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+A + + M PN Y +I K+ +++EA L DEM+E G PD
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++ ++ C A + M + P+ TY +++ L ++GR A + +
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M G +P TY ++ G C K G+L+EA + + + P YSS V L
Sbjct: 426 MIAHGCFPDSVTYICLLDGFC-KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 3/304 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
+ G + ++ + L++ L K+ + + K P +++IL+R
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYSIF 120
+A F+ M ++C D+ L++ +CKAG ++A + EM ++G PD ++
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A + V M++ P+ YN +I L K +EA ++LD M+ +
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P E +Y ++ C + A L M P+ Y ++ + GR A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++ M + G+ P V T++VM+ GLC K G E+A K FE M+ G P T + L
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLC-KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 301 VGLG 304
+G
Sbjct: 411 SKIG 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + D F+Y+ ++ + + + + M + + PN F++N +IR + + ++A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLK 227
+ M + PD ++ ++ C A + M V PDR + +++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L++ R A EV+ MEK GF P Y+ M+ GL K G +EA K + M+ +
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL-AKAGHAQEALKVLDNMLAKACV 292
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
P T +L N L G L+ E L M S
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
M+ G KP++ L+ ALC +V A F++ A+ E +V Y L+ G
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL 733
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A KLF++M+ R + SL + + ++G ++A +L+EM + G+ P A +++
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793
Query: 119 IFIHAFCEANDIHSVFRVL 137
+ ++++ + +++
Sbjct: 794 AILDGLRKSDESGKLLKLV 812
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 7/320 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
VE G+KP++ + L++ LCKR +K A + + K + P V T++ L+ GL G
Sbjct: 293 VELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWT 352
Query: 61 SEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF +++ ++ + S++ CK ++ A +L M+ G P+ +Y+
Sbjct: 353 EKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTC 412
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A + + ++D M + N+FTYN I LCK + EA +LL + G
Sbjct: 413 LIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLG 472
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y +++ C RA+ AL ++M K V PD HTYN ++ R R + +
Sbjct: 473 LQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESE 532
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ G P+ TY+ M+ G C+ + + A K+F M D G P S T L +
Sbjct: 533 KLFAEAVGLGLVPTKETYTSMICGYCRDR-NVSLALKFFNRMSDHGCTPDSLTYGALISG 591
Query: 300 LVGLGFLD----IIEILADK 315
L LD + E + DK
Sbjct: 592 LCKESKLDEACQLYEAMVDK 611
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++H CK + A K + P KTY+ L+ G G +A +
Sbjct: 369 KPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYE 428
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D M + +I +N+ ++++CK G EA +L++ +G + D +Y+I I C
Sbjct: 429 LMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELC 488
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D M + + P++ TYN +I + ++EE+ +L E + G P +
Sbjct: 489 RRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKE 548
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +++ +C V++AL+ RM+ PD TY ++ L + + D A +++E+M
Sbjct: 549 TYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAM 608
Query: 246 EKRGFYPSVSTYSVMVHGLCKK 267
+G P T + + CK+
Sbjct: 609 VDKGLSPCEVTRLTLAYEYCKQ 630
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 136/277 (49%), Gaps = 3/277 (1%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
H TV+T + + G++G + A +FDEM R D +++ + A C+ G I +
Sbjct: 190 HGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISD 249
Query: 98 AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
L++M G D + ++ I FCE VF D L PN+ + +I
Sbjct: 250 TDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLIN 309
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVM 216
LCK +++A+++L+EM+++G P+ +++ A++ C + A RL ++ + ++
Sbjct: 310 GLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYK 369
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ HTY ++ + + +RA + M+++G P+ TY+ ++ G K G E+A +
Sbjct: 370 PNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGH-SKAGNFEKAYE 428
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEIL 312
++M EG T + L G FL+ ++L
Sbjct: 429 LMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLL 465
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +I+ + + +LCK+ A + + TY+IL+ L + EA
Sbjct: 437 GFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREA 496
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
F +M + D+ +N+L+ A + ++E+ + E +G P +Y+ I
Sbjct: 497 LVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICG 556
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C ++ + + M + P+ TY +I LCK K++EA QL + M+++G +P
Sbjct: 557 YCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPC 616
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKE 213
E + + +C + + A+ ++ R+ K+
Sbjct: 617 EVTRLTLAYEYCKQDDSATAMVILERLDKK 646
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G++P ++ + L+ A +++ ++ + + F A PT +TY+ ++ G
Sbjct: 503 MFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRN 562
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A K F+ M + C D L + +L+ +CK +DEA + M G P +
Sbjct: 563 VSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLT 622
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ +D + +L+ + + + V N +IRKLC KV A +++++
Sbjct: 623 LAYEYCKQDDSATAMVILERLDKKLWIRTV---NTLIRKLCSERKVGMAVLFFHKLLDKD 679
Query: 180 ANPDEWSYNAI 190
N D + A
Sbjct: 680 QNVDRVTLTAF 690
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 153/300 (51%), Gaps = 9/300 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA--HQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
M E GI PS+ L+ L+ ALCK A F + P TY L+ GL +G
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLG 205
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ EA++LF EM + C ++ + SL+ +C++ ++D A +L EM S G +P+ F+YS
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C++ +LD M +PN+ TY+ ++ LCK K++EA ++LD M +
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL--LVRVG--- 233
G PD Y I++ CD + + A + M + P+R T+++ +++ +V G
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 234 -RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+RA +++ SM RG T+ +V+ C KG L +A + MV +G P T
Sbjct: 386 EHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFC-NKGDLHKAAHLVDEMVLDGCIPDEXT 444
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 9/227 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ L+H LC+ K + A + + A P V TYS L+ G G S A +L
Sbjct: 224 PTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALEL 283
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D M+ R+ +++ +++L+ +CK G + EA +L M+ G PDA Y I FC+
Sbjct: 284 LDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCD 343
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTY-------NCIIRKLCKNEKVEEAYQLLDEMIERG 179
H LD M + PN T+ N +++ LC E A+QL M RG
Sbjct: 344 ICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRG 402
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
+ D ++++++ Y C++ +++ A L+ M + +PD T+N V+
Sbjct: 403 ISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVV 449
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 46/334 (13%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGELSEARKLFDEM 70
Q+ + + ++ A FD+A E+T + T+S+++ L A +L M
Sbjct: 17 QVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRM 76
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
E KC + S+ A + +A + R+M+ EP SY N +
Sbjct: 77 KEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE--------------------------- 163
R M+ + P+V + N +I+ LCKN
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGT 196
Query: 164 ---------KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
K+ EA +L EM + +P +Y +++ C +++ A+RL+ M +
Sbjct: 197 LIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ P+ TY+ ++ + G RA E+ + M R P++ TYS +VHGLC K+GKL+EA
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLC-KEGKLQEA 315
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
+ + M +G+ P + L +++ GF DI
Sbjct: 316 VEILDRMKLQGLRPDAG----LYGKIIS-GFCDI 344
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T++ +I +L A +LL M E N E + +I + + A+R+ +M
Sbjct: 52 TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ P + +Y V +LV + A + M + G PSV++ +V++ LCK G
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME-RSTSCTIQELAN 329
++ A + F M + G PP+S T L L LG + + L +ME ++ S T+ +
Sbjct: 172 MDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXS 231
Query: 330 AMRG 333
+ G
Sbjct: 232 LIHG 235
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G++P++ + L+ CK V+ + + E P V T+S L+ GL G L E
Sbjct: 278 GLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEG 337
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LFDEM R + + +L++ CK G +D A + M + G PD +Y+ I+
Sbjct: 338 SLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALING 397
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ R+++ M L P+ T+ +I CK+ +E A ++ M+E G D
Sbjct: 398 LCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELD 457
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ ++ A+++ C V+ A R++T M PD TY MV+ + G ++ +
Sbjct: 458 DVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLK 517
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+ G P V TY+ +++GLC K+G+++ A + M++ G+ P T +L
Sbjct: 518 EMQSDGHVPGVVTYNALMNGLC-KQGQMKNAKMLLDAMLNVGVAPNDITYNIL 569
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 149/318 (46%), Gaps = 4/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G P IY + L+H CK V A FD K PTV +++ L+ G G+
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGD 298
Query: 60 LSEARKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ E +L M E CP D+ ++L+ +CK G +DE + EM G P+ +++
Sbjct: 299 VEEGFRLKGVMESEGVCP-DVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ + + M + P++ TYN +I LCK ++EA +L++EM
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD+ ++ ++ C ++ AL + RM +E + D + ++ L R GR A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M GF P TY++++ C KKG ++ K + M +G P T L N
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFC-KKGDVKMGFKLLKEMQSDGHVPGVVTYNALMN 536
Query: 299 RLVGLGFLDIIEILADKM 316
L G + ++L D M
Sbjct: 537 GLCKQGQMKNAKMLLDAM 554
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
E+ + L+ E+L+ P I N L+ CKAG++ A + E+ G P S++
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C++ D+ FR+ M+ + P+VFT++ +I LCK +++E L DEM R
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ ++ ++ C +V++AL+ M + V PD TYN ++ L +VG A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M G P T++ ++ G C K G +E A + MV+EGI
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCC-KDGDMESALEIKRRMVEEGI 454
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 128/260 (49%), Gaps = 1/260 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P ++ L++ LCK + FD P T++ L+ G G++ A
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLA 372
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F ML + D++ +N+L+ +CK G++ EA ++ EM + G +PD +++ I
Sbjct: 373 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDG 432
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ S + M + + + +I LC+ +V +A ++L +M+ G PD
Sbjct: 433 CCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPD 492
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +Y ++ C + +V M +L+ M + +P TYN ++ L + G+ A + +
Sbjct: 493 DPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLD 552
Query: 244 SMEKRGFYPSVSTYSVMVHG 263
+M G P+ TY++++ G
Sbjct: 553 AMLNVGVAPNDITYNILLDG 572
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
VLDS P ++ +N ++ CK V A + DE+ +RG P S+N +++ C
Sbjct: 239 VLDS----GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCC 294
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+V RL M E V PD T++ ++ L + GR D + +++ M RG P+
Sbjct: 295 KSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGV 354
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
T++ ++ G CK GK++ A K F+MM+ +G+ P T L N L +G L L ++
Sbjct: 355 TFTTLIDGQCKG-GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 413
Query: 316 MERS 319
M S
Sbjct: 414 MTAS 417
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 155/296 (52%), Gaps = 4/296 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGEL 60
+F ++ S+ L+ LL+A + K + H F N +K+ P V T +IL++ L ++
Sbjct: 158 DFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDV 217
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+ DEM +++ + ++L G++ A+ + E+ G PDA +Y+I
Sbjct: 218 ESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTIL 277
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++ +CE + +++D M + PN TY ++ CK +K EA LLD+M+ER
Sbjct: 278 MNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQY 337
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P ++ C+ ++ A L RM K+N MPD + ++ L + G+ A +
Sbjct: 338 VPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARK 397
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ E RG PS+ TY+ ++ G+C +KG+L EA K ++ M+++G P + T ML
Sbjct: 398 LFGEFE-RGAIPSLLTYNTLIAGMC-EKGELSEAGKLWDDMMEKGYKPNAFTYNML 451
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 153/337 (45%), Gaps = 41/337 (12%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
++G+ P+++ + L+ ALCK+ V+ A + D P V TY+ ++ G G++
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMV 253
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K+F E+ +R D + L+ C+ G + +A ++ +M G EP+ +Y + +
Sbjct: 254 NANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMV 313
Query: 122 HAFC-----------------------------------EANDIHSVFRVLDSMKRYNLV 146
A+C EA I + M + N +
Sbjct: 314 EAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCM 373
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+ + +I LCK KV EA +L E ERGA P +YN ++A C++ E++ A +L
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSEAGKL 432
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M ++ P+ TYNM++K ++G + E M P+ STY++++ LC
Sbjct: 433 WDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELC- 491
Query: 267 KKGKLEEACKYFEM-MVDEGIPPYSSTVEMLRNRLVG 302
K G E K M M G+ S + ++ N+ VG
Sbjct: 492 KMGMEGEVDKVVSMAMASGGVD--SDSWDLFLNKAVG 526
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 14 DQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
D ++H L + R V D K + + ++R G G+ A + F + +
Sbjct: 99 DSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQD 158
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPDAFSYSIFIHAFCEANDIH 131
+ + N+LL A + D H M + RS G P+ F+ +I I A C+ ND+
Sbjct: 159 FNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVE 218
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
S +VLD M ++PNV TY I+ + A ++ E+ +RG PD +Y ++
Sbjct: 219 SAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILM 278
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C++ + A++L+ M + V P+ TY ++++ + + A + + M +R +
Sbjct: 279 NGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYV 338
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
PS + ++ LC + GK+EEAC+ ++ M+ + P ++ + L
Sbjct: 339 PSSALCCKVIDVLC-EAGKIEEACELWKRMLKKNCMPDNAIMSTL 382
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ + G+ P++ + ++ LCKR VK A + + K+ + P V T++ L+ GL G
Sbjct: 892 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 951
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A +LF +++ ++ + +++ CK + A + M+ G P+ +Y+
Sbjct: 952 TERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYT 1011
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+A + + +++ M PN TYN I+ LCK + EEA++LL+ +
Sbjct: 1012 TLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQN 1071
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
D +Y +++ C RA++N AL + +M K PD H Y ++ R +
Sbjct: 1072 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 1131
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++++ + K G P+ TY+ M+ G C++K K+ A K+F+ M D G P S + L +
Sbjct: 1132 EKLFDEVIKLGLAPTKETYTSMICGYCREK-KVSLAVKFFQKMSDHGCAPDSISYGALIS 1190
Query: 299 RLVGLGFLDIIEILADKM 316
L LD L D M
Sbjct: 1191 GLCKESRLDEARQLYDTM 1208
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 5/267 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+++++ + + V+ A FD + P TY ++ G G + EA + EM+
Sbjct: 799 MNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM 858
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
ER VD ++ A C+ ++ A ++ +G P+ +YS I C+ +
Sbjct: 859 ERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVK 918
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNA 189
F +L+ M + PNV+T+ +I LCK E A++L ++I R N P+ +Y A
Sbjct: 919 QAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLI-RSDNYKPNVHTYTA 977
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+++ +C +++ A L RM ++ ++P+ +TY ++ + G F +A E+ E M G
Sbjct: 978 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 1037
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACK 276
F+P+ TY+ +V GLC K+G+ EEA K
Sbjct: 1038 FFPNTCTYNSIVDGLC-KRGRAEEAFK 1063
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 134/261 (51%), Gaps = 14/261 (5%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +FDEM R D + ++ C+ GN+ EA + EM G D + ++ I
Sbjct: 815 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
AFCE + ++ + + L PN+ Y+ +I LCK V++A++LL+EM++ G P
Sbjct: 875 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ +++ +++ C + A RL ++ + +N P+ HTY ++ + + RA +
Sbjct: 935 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 994
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLR 297
+E M+++G P+ +TY+ ++ G C K G +A + E+M +EG P Y+S V+ L
Sbjct: 995 FERMKEQGLVPNTNTYTTLIDGHC-KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC 1053
Query: 298 NR--------LVGLGFLDIIE 310
R L+ GF + IE
Sbjct: 1054 KRGRAEEAFKLLNTGFQNQIE 1074
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++ CK + + A F+ K + P TY+ L+ G G S+A +
Sbjct: 969 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 1028
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M + +NS+++ +CK G +EA +L E D +Y+I I C
Sbjct: 1029 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 1088
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D++ L+ M + P++ Y +I C+ ++++ +L DE+I+ G P +
Sbjct: 1089 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 1148
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +++ +C +V++A++ +M+ PD +Y ++ L + R D A +++++M
Sbjct: 1149 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 1208
Query: 246 EKRGFYPSVSTYSVMVHGLCK 266
+G P T + + CK
Sbjct: 1209 IDKGLSPCEVTRVTLTYEYCK 1229
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G + EA M+ +MR+ G + I E + V D M + P+ TY
Sbjct: 775 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
II C+N V EA + + EM+ERG D + I+ C+++ VN A+ ++TK
Sbjct: 835 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ P+ Y+ ++ L + G +A E+ E M K G+ P+V T++ ++HGLC KKG E
Sbjct: 895 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC-KKGWTE 953
Query: 273 EACKYFEMMV 282
A + F ++
Sbjct: 954 RAFRLFLKLI 963
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P+ L+ CK + A++ + +E F P TY+ +V GL G
Sbjct: 998 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 1057
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL + + + D + + L+ CK ++++A L +M +G +PD Y+
Sbjct: 1058 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 1117
Query: 120 FIHAFCEAN---DIHSVF--------------------------------RVLDSMKRYN 144
I AFC N D +F + M +
Sbjct: 1118 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 1177
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+ +Y +I LCK +++EA QL D MI++G +P E + + +C + A+
Sbjct: 1178 CAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAM 1237
Query: 205 RLITRMTKENVMPDRHT 221
++ R+ K+ + HT
Sbjct: 1238 VILERLNKKLWIRTVHT 1254
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G +P I+ L+ A C++ +K + + FD K PT +TY+ ++ G +
Sbjct: 1103 MFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKK 1162
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A K F +M + C D +++ +L+ +CK +DEA + M G P +
Sbjct: 1163 VSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVT 1222
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ D S +L+ + + + V T +IRKLC +KV A +++++
Sbjct: 1223 LTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKE 1279
Query: 180 ANPD 183
N D
Sbjct: 1280 VNVD 1283
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 70/189 (37%), Gaps = 36/189 (19%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++ + K++EA ++ +M +G N I+ + V A + M+
Sbjct: 766 CMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSAR 825
Query: 214 NVMPDRHTYNMVLKLLVRVGR-----------------------------------FDRA 238
V PD TY ++ R G +RA
Sbjct: 826 GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 885
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + K G P++ YS M+ GLC K+G +++A + E MV G P T L +
Sbjct: 886 VWFFHKVTKMGLSPNLINYSSMISGLC-KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 944
Query: 299 RLVGLGFLD 307
L G+ +
Sbjct: 945 GLCKKGWTE 953
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 162/317 (51%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G P ++ L +++ A FFD+ K F P V Y+ LVRG GE+
Sbjct: 212 MEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA K+F +M ++ ++ +++A+C+ G I AH + +M G P+A +++
Sbjct: 272 SEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MK+ P+ TYN +I C++E +E A ++L+ MI++
Sbjct: 332 MRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKC 391
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ ++N I Y + +VN A R+ ++M + P+ TYN+++++ D +
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLK 451
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M+ + P+V+TY ++V C G A K F+ MV+E + P S EM+ +
Sbjct: 452 MKKDMDDKEVEPNVNTYRLLVTMFC-GMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 511 LRRAGQLKKHEELVEKM 527
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ ++ G V + A L D M R + I L+ +AG EA M
Sbjct: 154 YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKV 165
G PD ++SI I DS+K R+ P+V Y ++R C+ ++
Sbjct: 214 DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFE--PDVIVYTNLVRGWCRAGEI 271
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA ++ +M G P+ ++Y+ ++ C +++ A + M P+ T+N +
Sbjct: 272 SEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+++ V+ GR ++ +V+ M+K G P TY+ ++ C+ + LE A K M+ +
Sbjct: 332 MRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDEN-LENAVKVLNTMIKKK 390
Query: 286 IPPYSST 292
+ST
Sbjct: 391 CEVNAST 397
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 5/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E P ++ LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 157 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 216
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R+ +++ ++S++ A+CKA +D+A +L M G PD +
Sbjct: 217 EGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 276
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + PNV TY ++ LCKN + EA ++ D M
Sbjct: 277 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMT 336
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG PD +Y +L + + + L+ M + + PD H +N+++ + + D
Sbjct: 337 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 396
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+A V+ M + G P+V Y ++ LC K G +++A YFE
Sbjct: 397 QAMLVFSKMRQHGLNPNVVCYGTVIDVLC-KSGSVDDAMLYFE 438
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 144/326 (44%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILV---------- 51
G SIY ++ L + + F A+ E TP + TYSIL+
Sbjct: 53 GWGASIYSFNRTLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLD 112
Query: 52 ---RGLGDV-----------------GELSEARK------LFDEMLERKCPVDILAHNSL 85
LG+V G ++ R + M E C D+ + L
Sbjct: 113 LGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 172
Query: 86 LEAMCKAGNIDEAHGMLREM---RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
L+ +C EA +L M R G+ PD SY+ I+ F + D + M
Sbjct: 173 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 232
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ PNV TY+ II LCK + +++A ++L+ M++ G PD +YN+IL +C +
Sbjct: 233 RRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 292
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V P+ TY ++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 293 AIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQ 352
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 353 GY-ATKGALVEMHALLDLMVRNGIQP 377
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 127/334 (38%), Gaps = 79/334 (23%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSI 119
AR + DE+ R I + N L + + + A + M GA+ PD +YSI
Sbjct: 42 ARHVLDELPLRGWGASIYSFNRTLTDVAR-DSPAAAVSLFNRMARAGADEVTPDLCTYSI 100
Query: 120 FIHAFCEA-----------NDIHSVFR-------------------------VLDSMKRY 143
I C A N I FR VL M
Sbjct: 101 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTEL 160
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLL------------------------------- 172
+ +P+VF+ +++ LC + +EA +LL
Sbjct: 161 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 220
Query: 173 -------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EM++R +P+ +Y++I+A C ++ A+ ++ M K VMPD TYN +
Sbjct: 221 DKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 280
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
L G+ A + M G P+V TY +++ LC K G+ EA K F+ M G
Sbjct: 281 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLC-KNGRCTEARKIFDSMTKRG 339
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+ P +T L G L + L D M R+
Sbjct: 340 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRN 373
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK---ENVMPDRHT 221
E A +LDE+ RG +S+N L R A+ L RM + + V PD T
Sbjct: 39 TEGARHVLDELPLRGWGASIYSFNRTLT-DVARDSPAAAVSLFNRMARAGADEVTPDLCT 97
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
Y++++ R GR D ++ K+GF T++ ++ GLC K
Sbjct: 98 YSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADK 144
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P++ + L+ ALCK V A F+ +E TP + ++ LV GL V +
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L EML++ + + N+L+ +C G + E ++ M +G PDAFSY+
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C A +V D M L P TYN ++ C ++++AY L EM+ +G
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN IL + A L M D +TYN++L L + D A
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S+ +G ++ T+++M+ L K G+ E+A F + G+ P T ++
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALL-KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 633
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L+ G L+ + L ME++ + ++ NA+
Sbjct: 634 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 665
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P + + A K + A F+ + H +P V Y L+ L +G
Sbjct: 300 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ +I+ NSL+ +C + A ++ EM G P+A ++
Sbjct: 360 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 419
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + R++D M+ + P+ F+Y +I C + +EA ++ D M+ G
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P E +YN +L +C + ++ A L M ++ V P TYN +L L + RF A
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 539
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E++ +M G + TY+++++GLCK ++EA K F+ + +G+
Sbjct: 540 ELYLNMINSGTKCDIYTYNIILNGLCKSNC-VDEAFKMFQSLCSKGL 585
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEM 70
++QLL LC K V A E TP +YSIL++G + EA +L M
Sbjct: 136 INQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195
Query: 71 LE---RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
R CP +++ + ++++ +CKA D A G+ ++M G +P+ +Y+ IH +
Sbjct: 196 ANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSI 255
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
V ++L+ M L P+ +TY ++ LC + E + LD M+E G +PD +
Sbjct: 256 GKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIF 312
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N + + ++ A+ + +M + + P+ Y ++ L ++GR D A + M
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 372
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G P++ ++ +V+GLC K E A + M+D+GI P + L L +G
Sbjct: 373 EGVTPNIVVFNSLVYGLCTVD-KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 428
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P TYSIL+ L +G L + F +L+ V+ + N LL+ +C + EA
Sbjct: 95 APNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMD 154
Query: 101 -MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR---YNLVPNVFTYNCII 156
+L+ M +G PD SYSI + FC N +L M + PNV TY +I
Sbjct: 155 VLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVI 214
Query: 157 RKLCKNE-----------------------------------KVEEAYQLLDEMIERGAN 181
LCK + K +E Q+L++M RG
Sbjct: 215 DGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++Y ++L Y C +E++ L L M + + PD H +N+ + G D+A ++
Sbjct: 275 PDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 331
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M + G P+V Y ++ LC K G++++A F M++EG+ P
Sbjct: 332 FNKMRQHGLSPNVVNYGALIDALC-KLGRVDDAEVKFNQMINEGVTP 377
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 6/326 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHA-LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+KP+ + L+H L K +V + P TY L+ L
Sbjct: 233 MIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---A 289
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSE D M+E D N A K G ID+A + +MR G P+ +Y
Sbjct: 290 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + M + PN+ +N ++ LC +K E A +L+ EM+++G
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +N ++ C+ V RLI M V PD +Y ++ GR D A
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAE 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V++ M G P+ TY+ ++HG C ++++A F M+ +G+ P T + +
Sbjct: 470 KVFDGMVSIGLSPTEVTYNTLLHGYCSAS-RIDDAYCLFREMLRKGVTPGVVTYNTILHG 528
Query: 300 LVGLG-FLDIIEILADKMERSTSCTI 324
L F + E+ + + T C I
Sbjct: 529 LFQTKRFSEAKELYLNMINSGTKCDI 554
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I + L++ LC + A + ++ P ++ L+ L +VG
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E R+L D M D ++ L+ C AG DEA + M SIG P +Y+
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C A+ I + + M R + P V TYN I+ L + ++ EA +L MI G
Sbjct: 490 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 549
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMT-----------------------KENVM 216
D ++YN IL C V+ A ++ + KE+ M
Sbjct: 550 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 609
Query: 217 ------------PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
P+ TY +V + L+ G + ++ +MEK G P+ + +V L
Sbjct: 610 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 669
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+G + A Y + + +ST +L
Sbjct: 670 L-HRGDISRAGAYLSKLDERNFSVEASTTSLL 700
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN---------------IDEAH 99
G +G L +A KLFDE+L P ++A N +L A+ +A + +
Sbjct: 26 GSLG-LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFN 84
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
M+RE SI P+ +YSI I C + F + + N N +++ L
Sbjct: 85 RMVREC-SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGL 143
Query: 160 CKNEKVEEAYQ-LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE---NV 215
C ++V EA LL M E G PD SY+ +L C+ AL L+ M + +
Sbjct: 144 CDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSC 203
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P+ TY V+ L + FDRA V++ M G P+ TY+ ++HG GK +E
Sbjct: 204 PPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYL-SIGKWKEVV 262
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGL----GFLDII 309
+ E M G+ P T L N L L FLD++
Sbjct: 263 QMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLM 300
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P+ + LLH C + A+ F + + TP V TY+ ++ GL
Sbjct: 475 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ DI +N +L +CK+ +DEA M + + S G + + +++I
Sbjct: 535 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 594
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVPNV TY + L + +EE L M + G
Sbjct: 595 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
P+ NA++ R +++ A ++++ + N + T ++++ +
Sbjct: 655 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P + L+ C A + FD +PT TY+ L+ G
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF EML + ++ +N++L + + EA + M + G + D ++Y+I
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C++N + F++ S+ L N+ T+ +I L K + E+A L + G
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y + + + L + M K P+ N +++ L+ G RA
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 679
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+++R F ST S+++
Sbjct: 680 AYLSKLDERNFSVEASTTSLLI 701
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 168/391 (42%), Gaps = 63/391 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+ + G P++ + LLH LC V A F H+ P V T++ L+ GL G
Sbjct: 41 LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF----HQMCKPNVVTFTTLMNGLCREGR 96
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR---------------- 103
+ EA L D M+E + + + ++++ MCK G+ A +LR
Sbjct: 97 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156
Query: 104 --------------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
EM+ G PD +YS I+ FC + R+L M
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V T++ +I L K + A LL EMI G P+ + N +L CD ++ A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 204 LRLITRMTKE-----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
L + M K V PD TYN+++ L+ G+F A E++E M RG P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEI 311
TYS M++GLCK+ +L+EA + F+ M + P T L G + D +E+
Sbjct: 337 DTVTYSSMINGLCKQS-RLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 312 LADKMERSTSCTIQELANAMRGKT---GFRK 339
+ R +ANA+ T GFRK
Sbjct: 396 FCEMGRRGI------VANAITYITLIRGFRK 420
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 173/365 (47%), Gaps = 18/365 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
MVE G++P+ ++ +CK A + P V YS ++ GL G
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDG 166
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++A+ LF EM ++ DI+ ++ ++ C +G EA +L+EM PD ++S
Sbjct: 167 RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE- 177
I+A + D++S +L M + PNV T N ++ LC + K+++A ++ M +
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 178 ----------RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G PD +YN +++ + + A L M ++PD TY+ ++
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + R D AT++++SM + F P++ T++ ++ G C K G +++ + F M GI
Sbjct: 347 GLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC-KAGMVDDGLELFCEMGRRGIV 405
Query: 288 PYSST-VEMLRN-RLVG--LGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSE 343
+ T + ++R R VG G LDI + + + TI+ + + K +K+ +
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAM 465
Query: 344 ETELE 348
EL+
Sbjct: 466 LEELQ 470
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 6/250 (2%)
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+ P DI + N L++ C + A ++ +G P +++ +H C + +
Sbjct: 10 QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ M + PNV T+ ++ LC+ +V EA LLD M+E G P++ +Y I+
Sbjct: 70 LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 194 HCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + AL L+ +M + ++ PD Y+ ++ L + GR A ++ M+ +G +P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
+ TYS M++G C GK EA + + M+ I P T L N LV G L+ + L
Sbjct: 186 DIVTYSCMINGFC-SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244
Query: 313 ADKMERSTSC 322
+M S C
Sbjct: 245 LQEMISSGVC 254
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V A Q + H PT Y+ L+ G V +L A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F++M R D + +N+L+ +CK + +A ++ EM G +P +++ I A
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + F VL M++ + +V ++ +++ CKN K+ EA +LD+MI + P+
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN+I+ + + + A L+ +M V TYN++LK L R + D A E+
Sbjct: 509 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ +G P V +Y+ ++ C KG ++A + + M GI P T L + L
Sbjct: 569 TLRNQGLRPDVVSYNTIISACC-NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627
Query: 304 GFLDIIEILADKM 316
G + +E L +M
Sbjct: 628 GRVHDMECLYQQM 640
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 135/257 (52%), Gaps = 1/257 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+P + L++ LCK + V A + K P+V+T++ L+ G G+L +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +M ++ D+++ S+++A CK G I EA +L +M P+A Y+ I A+
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
E+ D F +++ MK + ++ TYN +++ LC++ +++EA +L+ + +G PD
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN I++ C++ + + AL L+ M K + P TY+ ++ L GR +++
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639
Query: 245 MEKRGFYPSVSTYSVMV 261
M + PS S Y +MV
Sbjct: 640 MLHKNVEPSSSIYGIMV 656
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G KP+I + LL LC+ + D A H P TYSIL GL GE
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF E L++ + + LL +CK G + +A +L + G P Y+
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+ D+ F + + MK ++ P+ TYN +I LCK E V +A L+ EM + G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 180 ANP-----------------------------------DEWSYNAILAYHCDRAEVNMAL 204
+P D S+ +++ C ++ A+
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V P+ YN ++ + G ++A + E M+ G S+ TY++++ GL
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C+ +++EA + + ++G+ P
Sbjct: 555 CRSS-QIDEAEELIYTLRNQGLRP 577
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+V G+ P+ + L++ C+ + ++ A F+ K P TY+ L+ GL +
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L EM + + N+L++A AG +++ +L +M+ G + D S+
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ I +LD M ++ PN YN II ++ E+A+ L+++M G
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 539
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN +L C ++++ A LI + + + PD +YN ++ G D+A
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
E+ + M K G P++ TY +V L G++ + ++ M+ + + P SS
Sbjct: 600 ELLQEMNKYGIRPTLRTYHTLVSAL-ASAGRVHDMECLYQQMLHKNVEPSSS 650
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + ++ L + A + FD P TY+ ++ G G+L +L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D+ML +I+ +N LL +C+AG +DE ++ EM S PD F+YSI
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ ++ + + ++ +T + ++ LCK+ KV +A Q+L+ ++ G P
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ +C ++ A + +M ++ PD TYN ++ L ++ +A ++ ME
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K G PSV T++ ++ G+LE+ M +GI
Sbjct: 432 KSGVDPSVETFNTLIDAY-GTAGQLEKCFTVLSDMQQKGI 470
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 38/315 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ + ++L+ L VG ++ R F ++ D A N +++A AG++D A M
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 102 LREM-RSIGAEP-DAFSYSIFIHAF----------------------------------- 124
+R M RS GA P DAFSY++ I
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D+ + FR+ D M PN+ TYN ++ LC+ +++E L+DEM PD
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y+ + E L L K+ VM +T +++L L + G+ +A +V E
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ G P+ Y+ +++G C+ + L A FE M I P T L N L L
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVR-DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418
Query: 305 FLDIIEILADKMERS 319
+ E L +ME+S
Sbjct: 419 MVTKAEDLVMEMEKS 433
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 156/340 (45%), Gaps = 11/340 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDV 57
+V G +P + ++++ A + VA ++ P +Y++++ GL
Sbjct: 148 LVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRS 207
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G+ S+A K+FDEM++ + + +N++++ K G+++ + +M G +P+ +Y
Sbjct: 208 GKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTY 267
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ + C A + ++D M +++ P+ FTY+ + L + + L E ++
Sbjct: 268 NVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLK 327
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G ++ + +L C +V A +++ + ++P YN ++ +V
Sbjct: 328 KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 387
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD---EGIPPYSSTVE 294
A ++E M+ R P TY+ +++GLC KLE K +++++ G+ P T
Sbjct: 388 AFCIFEQMKSRHIRPDHITYNALINGLC----KLEMVTKAEDLVMEMEKSGVDPSVETFN 443
Query: 295 MLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
L + G L+ +L+D ++ + + ++
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ + P+ + ++ A + + A + K+ + ++ TY++L++GL +
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L + + D++++N+++ A C G+ D+A +L+EM G P +Y
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHT 619
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A A +H + + M N+ P+ Y ++ + E + L EM E+G
Sbjct: 620 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
Query: 180 ANPDE 184
D+
Sbjct: 680 IAFDD 684
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 148/349 (42%), Gaps = 48/349 (13%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IKP++ ++ LCK +H F + + P + TY+ ++ G G S A+
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 65 KLFDEMLERKCPVDILAHNSLLEA-----------------------------------M 89
+L EMLERK +++ +N+L+ A
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
CK +D A M M + G PD F+++ I +C A I +L M R LV N
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TYN +I C + A L +MI G PD + N +L CD ++ AL +
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 210 MTKE-----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
M K V PD TYN+++ L+ G+F A E++E M RG P TYS
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+ GLCK+ +L+EA + F M + P T L N G +D
Sbjct: 549 SMIDGLCKQS-RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 13/327 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+ + G+ P + LLH LC V A F H+ P V T++ L+ GL G
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF----HQICRPDVLTFTTLMNGLCREGR 197
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYS 118
+ EA L D M+E D + + + ++ MCK G+ A +LR+M I +P+ YS
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257
Query: 119 IFIHAFCEA---NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
I C+ +D H++F M+ + PN+ TYNC+I C + + A +LL EM
Sbjct: 258 AIIDGLCKDGRHSDSHNLFI---EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ER +P+ +YNA++ + A L M ++P+ TYN ++ + R
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A +++ M +G P V T++ ++ G C K ++++ + M G+ + T
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK-RIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSC 322
L + +G L+ L+ +M S C
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVC 460
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
MVE G++P + +CK A + P V YS ++ GL G
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S++ LF EM ++ +I+ +N ++ C +G A +L+EM P+ +Y+
Sbjct: 268 RHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYN 327
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TYN +I CK ++++ A + M +
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 387
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD +++ ++ +C ++ + L+ M + ++ + TYN ++ VG + A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T + ++ GLC GKL++A + F+ M
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLC-DNGKLKDALEMFKAM 489
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 34/333 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ D ++L+ A+ + + + + + + + +++IL++ +L A
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEA-------------------HGMLREMRS 107
F ++ + D++ +LL +C + EA +G+ RE R
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRV 198
Query: 108 I------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNC 154
+ G +PD +Y F+ C+ D S +L M+ + + PNV Y+
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
II LCK+ + +++ L EM ++G P+ +YN ++ C + A RL+ M +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ P+ TYN ++ V+ G+F A E+++ M RG P+ TY+ M+ G CK+ +L+ A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD-RLDAA 377
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
F +M +G P T L + G +D
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 13/291 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G P ++ L+ C K + + + + TY+ L+ G VG+
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI----------- 108
L+ A L +M+ DI+ N+LL+ +C G + +A M + M+
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G EPD +Y+I I + + M +VP+ TY+ +I LCK +++EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
Q+ M + +P+ ++N ++ +C V+ L L M + ++ D Y ++
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+VG + A ++++ M G YP T M+ G K+ +LE A E
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLE 673
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 135/303 (44%), Gaps = 34/303 (11%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L G ++ L +A LF +ML + ++ N L+ A+ + D + ++M
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 110 AEPDAFSYSIFIHAFCEANDIH---SVF--------------------------RVLDSM 140
D +S++I I FC + + S F RV +++
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 141 KRYNLV--PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
++ + P+V T+ ++ LC+ +V EA LLD M+E G PD+ +Y + C
Sbjct: 172 DLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231
Query: 199 EVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ AL L+ +M + ++ P+ Y+ ++ L + GR + ++ M+ +G +P++ TY
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKM 316
+ M+ G C G+ A + + M++ I P T L N V G F + E+ + +
Sbjct: 292 NCMIGGFC-ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 317 ERS 319
R
Sbjct: 351 PRG 353
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ + + L+H C + A P + T + L+ GL D G+L +A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 64 RKLFDEMLERKCPVD-----------ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
++F M + K +D +L +N L+ + G EA + EM G P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YS I C+ + + ++ SM + PNV T+N +I CK +V++ +L
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
EM RG D Y ++ +N AL + M V PD T +L
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Query: 233 GRFDRATEVWESMEK 247
+RA + E +++
Sbjct: 663 EELERAVAMLEDLQR 677
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P ++ LCK+ + A Q F + F+P V T++ L+ G G + +
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF EM R D + + +L+ K GNI+ A + +EM S G PD + +
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 124 FCEANDIHSVFRVLDSMKRYNL 145
F ++ +L+ ++RY L
Sbjct: 659 FWSKEELERAVAMLEDLQRYQL 680
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 143/271 (52%), Gaps = 2/271 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
GIK S++ + ++ LCK +++A F K FTP + TY+ L+ G G +G L E
Sbjct: 250 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F++M + C D++ +N+L+ CK + +A L EM++ G +P+ +YS FI A
Sbjct: 310 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + + M+R L PN FTY +I CK + EA +L++E+++ G +
Sbjct: 370 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 429
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A+L C+ + A + M V P++ TY ++ ++ + A ++ +
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
M+++ P + Y ++ GLC + +LEEA
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNES-RLEEA 519
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 169/350 (48%), Gaps = 19/350 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++ + A CK ++ A +FF D + TP TY+ L+ G L+EA
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 414
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL +E+L+ ++++ + +LL+ +C+ G + EA + R M + G P+ +Y+ +H
Sbjct: 415 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 474
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F +A ++ +L MK + P++ Y I+ LC ++EEA L+ E+ E G N +
Sbjct: 475 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 534
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ + + AL L+ M ++ TY ++ L + G A +
Sbjct: 535 AVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFG 594
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM---- 295
M + G P+V+ Y+ +V GLCK E A K F+ M+D+G+ P Y++ ++
Sbjct: 595 RMSEIGLQPNVAVYTALVDGLCKNNC-FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKH 653
Query: 296 --------LRNRLVGLGF-LDIIEILADKMERSTSCTIQELANAMRGKTG 336
LR+R++ +G LD+ A S S +Q+ N + G
Sbjct: 654 GNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 703
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 2/290 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L AL + ++ A + F K P ++ + L+ L VG +RK
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M + +N +++ +CK G+++ A + +M+ G PD +Y+ I +
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + + MK + P+V TYN +I CK E++ +A++ L EM G P+ +
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ + C + A++ M + + P+ TY ++ + G A ++ E +
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G +V TY+ ++ GLC ++G+++EA + F M++ G+ P T L
Sbjct: 423 QAGIKLNVVTYTALLDGLC-EEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ L+H K K ++ A K + P + Y ++ GL +
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+ L E+ E + + + +L++A K+G EA +L EM +G +Y
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + M L PNV Y ++ LCKN E A +L DEM+++G
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y A++ + + AL L RM + + D H Y ++ L G+ +A
Sbjct: 636 MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKAR 695
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + M +G P Y ++ GK++EA + M G+
Sbjct: 696 NLLDEMIGKGVLPDEVVYMCLIKKY-YALGKVDEALELQNEMAKRGM 741
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M E IKP + +L LC ++ A K T Y+ L+ G+
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA L +EML+ + + +L++ +CK+G + EA M IG +P+ Y+
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ N ++ D M ++P+ Y +I K+ ++EA L D MIE G
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y A++ +V A L+ M + V+PD Y ++K +G+ D A
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730
Query: 240 EVWESMEKRGFYPSVSTYSV 259
E+ M KRG +S ++V
Sbjct: 731 ELQNEMAKRGMITGLSDHAV 750
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSE 62
F ++ I D LL ALC+ K+V A K ++ K+++I++ G +V G E
Sbjct: 226 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPRE 285
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +++ EM D+++++S++ K G++++ + M+ EPD Y+ +H
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 123 AFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A +A+ + ++ +M+ + PNV TYN +I+ LCK K EEA Q+ DEM+E+G
Sbjct: 346 ALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 405
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y+A + EV L+ +M K P TY M+++ L R FD +
Sbjct: 406 PTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLL 462
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
W+ M+++ P +S+Y VM+HGL GK+EEA Y++ M D+G+ P + +M+++
Sbjct: 463 WDEMKEKTVGPDLSSYIVMIHGLF-LNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 521
Query: 302 G 302
G
Sbjct: 522 G 522
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 42/258 (16%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
++S++ + K D A ++ EMR ++ + I I +C +D+ +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL---------------------------- 172
KR+ L + + ++ LC+ + V +A L+
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 283
Query: 173 -------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EM G D SY+++++ + +N L+L RM KE + PDR YN V
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 226 LKLLVRVGRFDRATEVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L + A + ++M E++G P+V TY+ ++ LCK + K EEA + F+ M+++
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR-KTEEAKQVFDEMLEK 402
Query: 285 GIPP----YSSTVEMLRN 298
G+ P Y + + +LR
Sbjct: 403 GLFPTIRTYHAFMRILRT 420
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
E GI+P++ + L+ LCK + + A Q FD + PT++TY +R L GE
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE-- 422
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L +M + C + + L+ +C+ + D + EM+ PD SY + I
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPN 148
H I + MK + PN
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M EFGIKP+I + LL + CK V+ + P TY++L+ GL GE
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 60 LSEARKLFDEMLERKCPVD-----------------------------------ILAHNS 84
+A+ L EML+ V + +NS
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+ +CK G + +A L +M + PD SY+ I+ +C ++ F + D ++
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L P + TYN ++ LC+ ++E A QL EMI G PD +Y ++ C ++MA
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQ 464
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M E + D + Y + +++G RA + E M +GF P + Y+V+V GL
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K G LEEA + + MV +G+ P
Sbjct: 525 C-KLGNLEEASELLQKMVSDGVIP 547
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 163/328 (49%), Gaps = 6/328 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ + P + + L++ C+ ++ A FD + + PT+ TY+ L+ GL GE
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 424
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A++L EM+ DI+ + L+ CK G++ A EM G E D+++Y+
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + D F + + M P++ YN ++ LCK +EEA +LL +M+ G
Sbjct: 485 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +I+ H + + + M + + P TY +++ GR +RA
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M+++G P+V TY+ +++GLCK + ++++A +F MV++GI P + +L N
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVR-RMDQAYNFFAEMVEKGIFPNKYSYTILINE 663
Query: 300 LVGLG----FLDIIEILADKMERSTSCT 323
+G L + + + D+ + SCT
Sbjct: 664 NCNMGNWQEALSLYKQMLDRGVQPDSCT 691
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+I + LL LC++ ++VA Q + P + TY+ILV G +G LS A++
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
FDEML +D A+ + + K G+ A + EM + G PD Y++ + C+
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ +L M ++P+ TY II +N ++ + ++ EM+ +G P +
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ H + + A + M ++ ++P+ TYN ++ L +V R D+A + M
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMV 646
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++G +P+ +Y+++++ C G +EA ++ M+D G+ P S T L +L
Sbjct: 647 EKGIFPNKYSYTILINENCNM-GNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ + ++ LCK + A Q D + P V +Y+ L+ G +G
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A LFDE+ I+ +N+LL+ +C+ G ++ A + EM + G PD +Y+I
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ + D M L + + Y I K A+ L +EM+ +G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN ++ C + A L+ +M + V+PD TY ++ + GR +
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +G PSV TY+V++HG KG+LE A YF M ++GI P T L N
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHA-GKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 300 L 300
L
Sbjct: 629 L 629
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 137/268 (51%), Gaps = 3/268 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV--G 58
M+ GI P I L++ CK + +A +FFD HE + +Y+ R +G++ G
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL-ELDSYAYATRIVGELKLG 493
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ S A L +EML + P D++ +N +++ +CK GN++EA +L++M S G PD +Y+
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IHA E + + M L P+V TY +I ++E A+ EM E+
Sbjct: 554 SIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +YN+++ C ++ A M ++ + P++++Y +++ +G + A
Sbjct: 614 GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEA 673
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+++ M RG P T+S ++ L K
Sbjct: 674 LSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P + + +++L L + + A + + + PT+ TY+ L+ G+
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + L EM R C + + +N L+ + K G ++A G++ EM G + A++Y+
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + + + M P V TYN I LCK ++ +A Q L +M+
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN ++ +C + A L + + P TYN +L L R G + A
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++ M G P + TY+++V+G C K G L A ++F+ M+ EG+
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSC-KMGSLSMAQEFFDEMLHEGL 475
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 140/309 (45%), Gaps = 36/309 (11%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
+VK +L+ + + +FD+M++ + D+ N +L + + +A +
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
R M G +P +Y+ + ++C+ + +L M+R PN TYN +I L K
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 163 EKVE-----------------------------------EAYQLLDEMIERGANPDEWSY 187
+ E EA L +EM+ +GA+P +Y
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N+ + C ++ A++ ++ M N++PD +YN ++ R+G +A +++ +
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+P++ TY+ ++ GLC ++G+LE A + M++EGI P T +L N +G L
Sbjct: 403 IYLFPTIVTYNTLLDGLC-RQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 461
Query: 308 IIEILADKM 316
+ + D+M
Sbjct: 462 MAQEFFDEM 470
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ P ++HA + ++ + F++ TP+V TY++L+ G G
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A F EM E+ +++ +NSL+ +CK +D+A+ EM G P+ +SY+I
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTI 659
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
I+ C + + M + P+ T++ ++++L K+ K++ +
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E GI P++ + L++ LCK + + A+ FF + + P +Y+IL+ ++G
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
EA L+ +ML+R D H++LL+ + K + HG
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVHG 710
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 5 GIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
G P+I + LL+ LCK + + + + DN TP V TY+ L+ GLG
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG---CTPDVVTYTSLIDGLGKEKRS 345
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA KLF EM R +D + + +L+ + + G I +A + + M S G PD + S
Sbjct: 346 FEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 405
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +A I + R+ SM+ L PN Y+ +I LCK K++ A ++L +M +
Sbjct: 406 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 465
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ C +V A M + PD +TYN+++ L + G D A
Sbjct: 466 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACG 525
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
V + M F YS +V GLCK GKLE C F M G+
Sbjct: 526 VLDDMSSSRF-----VYSSLVDGLCKS-GKLEGGCMLFHEMERSGV 565
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+FG+ PS+ + +LH LCK V A F+ + + T+SIL+ GL G + +
Sbjct: 183 DFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQ 242
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L E C +DI + +++ + K I EA ++ ++ + G P +Y+ ++
Sbjct: 243 AHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLN 302
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + +L + P+V TY +I L K ++ EAY+L EM RG
Sbjct: 303 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D Y A++ ++ A + MT +PD T + ++ L + GR A ++
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 422
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+SME RG P+ YS ++HGLCK + K++ A + M P + T +L + L
Sbjct: 423 KSMEARGLAPNEVVYSALIHGLCKAR-KMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481
Query: 303 LGFLDIIEILADKM 316
G ++ D+M
Sbjct: 482 SGDVEAARAFFDEM 495
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 9/252 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+H LCK + + A + K F TP TY+IL+ GL G++ A
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 488
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R FDEMLE C D+ +N L+ +CKAGN D A G+L +M S F YS +
Sbjct: 489 RAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDG 543
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + + M+R V N T +I LCK +V+EA L + + + G P
Sbjct: 544 LCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PH 601
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+I++ +VN + MT+ PDR TYN +L ++ R DRA +
Sbjct: 602 PYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYL 660
Query: 244 SMEKRGFYPSVS 255
M RG+ P VS
Sbjct: 661 EMTGRGYVPPVS 672
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 3/293 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G I+ +++ L K K ++ A + + TPT+ TY+ L+ GL +G L EA
Sbjct: 254 GCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 313
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L ++++ C D++ + SL++ + K EA+ + +EM S G D Y+ I
Sbjct: 314 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRG 373
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ I V +M + VP+V T + +I L K ++ A ++ M RG P+
Sbjct: 374 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E Y+A++ C +++ AL ++ +M K PD TYN+++ L + G + A ++
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 493
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M + G P V TY++++ GLC K G + AC + M YSS V+ L
Sbjct: 494 EMLEAGCKPDVYTYNILISGLC-KAGNTDAACGVLDDMSSSRF-VYSSLVDGL 544
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 3/257 (1%)
Query: 31 QFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMC 90
Q + + F +V T + L+ EA L L D+ N L+ C
Sbjct: 106 QCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYC 165
Query: 91 KAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
A +EA ++REM G P ++++ +H C++ + + ++++R ++ +
Sbjct: 166 LAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSA 224
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
T++ +I L K + +A+ L E G D +Y AI+ + ++ A+ L+ +
Sbjct: 225 ATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEK 284
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+T P TYN +L L ++GR + A ++ + G P V TY+ ++ GL K+K
Sbjct: 285 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 344
Query: 270 KLEEACKYFEMMVDEGI 286
EA K F+ M G+
Sbjct: 345 SF-EAYKLFKEMASRGL 360
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+LL+ + EA +L+ + PD ++++ I +C A + F V+ M+
Sbjct: 123 NALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEE 182
Query: 143 -YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ + P++ T+N ++ LCK+ KV A E + R +++ ++ +
Sbjct: 183 DFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMI 241
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A L T D HTY ++ L + + A + E + G P+++TY+ ++
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+GLC K G+LEEA +VD G P Y+S ++ L
Sbjct: 302 NGLC-KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+E G KP +Y + L+ LCK + A D + + + YS LV GL G+L
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLD----DMSSSRFVYSSLVDGLCKSGKL 550
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
LF EM ER + L+ +CKA +DEA + +R G P ++Y+
Sbjct: 551 EGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSI 608
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A ++ ++ V M R+ P+ TYN ++ + +++ A+ EM RG
Sbjct: 609 ISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667
Query: 181 NP 182
P
Sbjct: 668 VP 669
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 148/349 (42%), Gaps = 48/349 (13%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IKP++ ++ LCK +H F + + P + TY+ ++ G G S A+
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 65 KLFDEMLERKCPVDILAHNSLLEA-----------------------------------M 89
+L EMLERK +++ +N+L+ A
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
CK +D A M M + G PD F+++ I +C A I +L M R LV N
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TYN +I C + A L +MI G PD + N +L CD ++ AL +
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 210 MTKE-----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
M K V PD TYN+++ L+ G+F A E++E M RG P TYS
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+ GLCK+ +L+EA + F M + P T L N G +D
Sbjct: 549 SMIDGLCKQS-RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 13/327 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+ + G+ P + LLH LC V A F H+ P V T++ L+ GL G
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF----HQICRPDVLTFTTLMNGLCREGR 197
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYS 118
+ EA L D M+E D + + + ++ MCK G+ A +LR+M I +P+ YS
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257
Query: 119 IFIHAFCEA---NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
I C+ +D H++F M+ + PN+ TYNC+I C + + A +LL EM
Sbjct: 258 AIIDGLCKDGRHSDSHNLFI---EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ER +P+ +YNA++ + A L M ++P+ TYN ++ + R
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A +++ M +G P V T++ ++ G C K ++++ + M G+ + T
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK-RIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSC 322
L + +G L+ L+ +M S C
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVC 460
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
MVE G++P + +CK A + P V YS ++ GL G
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG 267
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
S++ LF EM ++ +I+ +N ++ C +G A +L+EM P+ +Y+
Sbjct: 268 RHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYN 327
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+AF + + D M ++PN TYN +I CK ++++ A + M +
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 387
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD +++ ++ +C ++ + L+ M + ++ + TYN ++ VG + A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P + T + ++ GLC GKL++A + F+ M
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLC-DNGKLKDALEMFKAM 489
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 34/328 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ D ++L+ A+ + + + + + + + +++IL++ +L A
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEA-------------------HGMLREMRS 107
F ++ + D++ +LL +C + EA +G+ RE R
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRV 198
Query: 108 I------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNC 154
+ G +PD +Y F+ C+ D S +L M+ + + PNV Y+
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
II LCK+ + +++ L EM ++G P+ +YN ++ C + A RL+ M +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ P+ TYN ++ V+ G+F A E+++ M RG P+ TY+ M+ G CK+ +L+ A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD-RLDAA 377
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
F +M +G P T L + G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCG 405
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 13/291 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G P ++ L+ C K + + + + TY+ L+ G VG+
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI----------- 108
L+ A L +M+ DI+ N+LL+ +C G + +A M + M+
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G EPD +Y+I I + + M +VP+ TY+ +I LCK +++EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
Q+ M + +P+ ++N ++ +C V+ L L M + ++ D Y ++
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+VG + A ++++ M G YP T M+ G K+ +LE A E
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLE 673
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 34/297 (11%)
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
++ L +A LF +ML + ++ N L+ A+ + D + ++M D +
Sbjct: 58 EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117
Query: 116 SYSIFIHAFCEANDIH---SVF--------------------------RVLDSMKRYNLV 146
S++I I FC + + S F RV +++ ++ +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 147 --PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+V T+ ++ LC+ +V EA LLD M+E G PD+ +Y + C + AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 205 RLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L+ +M + ++ P+ Y+ ++ L + GR + ++ M+ +G +P++ TY+ M+ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
C G+ A + + M++ I P T L N V G F + E+ + + R
Sbjct: 298 FC-ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 12/254 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ + + L+H C + A P + T + L+ GL D G+L +A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 64 RKLFDEMLERKCPVD-----------ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
++F M + K +D +L +N L+ + G EA + EM G P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YS I C+ + + ++ SM + PNV T+N +I CK +V++ +L
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
EM RG D Y ++ +N AL + M V PD T +L
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Query: 233 GRFDRATEVWESME 246
+RA + E ++
Sbjct: 663 EELERAVAMLEDLQ 676
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 163/347 (46%), Gaps = 21/347 (6%)
Query: 6 IKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGEL 60
+ Y+L +L LC ++ A +FF K P +++Y IL+ L D G +
Sbjct: 135 VATGTYNL--VLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRM 192
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EA LF M C DI+ +N L++ CK G EA +++E+ G EP+ F+YSI
Sbjct: 193 AEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 249
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ +C+ + + + V M N VPN T+N +I CK +E+A +L EM + G
Sbjct: 250 INCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGC 309
Query: 181 NPDEWSYNAILAYHC-DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+YN ++ C R V A+ L ++ + P TYN +++ R A
Sbjct: 310 KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAM 369
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++ ME + P+V TYS+++ GLCK + +++EA K E M G P T L N
Sbjct: 370 QYFDEMEGK-CAPNVITYSILIDGLCKVR-RMKEAAKTLEDMKAHGYTPTVVTYGGLING 427
Query: 300 LVGLGFLDIIEILADKMERST--------SCTIQELANAMRGKTGFR 338
G L + +KM+ + + I L A R G R
Sbjct: 428 FCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P+++ +++ CK V+ A + F + P T++ L+ G G
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKA-GNIDEAHGMLREMRSIGAEPDAFSYS 118
L +A KLF EM + C I+ +N+L++++CK G + A + ++ G P +Y+
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+A + + D M+ PNV TY+ +I LCK +++EA + L++M
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +Y ++ C E+ AL +M P+ +N ++ L + R +
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDG 472
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+ M G P V TY+ ++ GLC ++E+A + F+ M
Sbjct: 473 LRLLCHMHAEGCKPDVITYNCLISGLCSAN-RVEDAQRLFDGMA 515
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 6/245 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVG 58
M + G K +I + L+ +LCK R V A F+ + TPT+ TY+ L++G D
Sbjct: 304 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
LSEA + FDEM E KC +++ ++ L++ +CK + EA L +M++ G P +Y
Sbjct: 364 RLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ FC+ ++ S + MK PN +N +I LCK E+ + +LL M
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +++ C V A RL M P+ T+N +++ L + + A
Sbjct: 483 GCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQKKVEEA 539
Query: 239 TEVWE 243
+ +
Sbjct: 540 RNILD 544
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 14/323 (4%)
Query: 23 RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH 82
RKH + F + F P TY++L+RG G++ +A +F +M +
Sbjct: 11 RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 70
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+LL +C+ G + A + REM++ P + S++I + F A + L M++
Sbjct: 71 NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRK 130
Query: 143 YNLVPNVFTYNCIIRKLCKNEK----VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+ TYN +++ LC K +E+A + EM G PD SY+ +L+ D
Sbjct: 131 SSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSG 190
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ A L + MT PD TYN+++ ++G+ A + + + K G+ P+V TYS
Sbjct: 191 RMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 247
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKME 317
++++ CK K+EEA + F M++ P + T L G L D I++ A+ ME
Sbjct: 248 IIINCYCKLD-KVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAE-ME 305
Query: 318 ----RSTSCTIQELANAMRGKTG 336
++T T L +++ K G
Sbjct: 306 KIGCKATIVTYNTLIDSLCKKRG 328
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+LL + A D+A + +E+ + P+A +Y++ I FC+ +H V MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
L+PN T N ++ LC+ ++ A +L EM P S+N +L V
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLV----RVGRFDRATEVWESMEKRGFYPSVSTYS 258
AL + M K + TYN+VLK L R ++A E ++ M+ G P + +Y
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 259 VMVHGLCKKKGKLEEACKYFEMMV 282
+++ L G++ EA F M
Sbjct: 181 ILLSAL-SDSGRMAEAHALFSAMT 203
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 166/322 (51%), Gaps = 3/322 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G++P++ L+ L+ LCK V A +FF+ K + TY+ L+ V
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A + F+EML C D + + SL+ +C AG +++A ++ +++ G D Y++
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + V+ +L M+ + P+ TYN +I L K A +++++MI+ G
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P +Y AI+ +C + V+ +++ M + V P+ YN+++ L R DRA
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ E M+ + P+ +TY+ ++ G+ KK L +A + + MV+E P T+E+L
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKK-MLHKAFELMDRMVEEACRPDYITMEVLTE 717
Query: 299 RLVGLGFLDIIEILADKMERST 320
L +G ++ ++ + + S+
Sbjct: 718 WLSAVGEIEKLKHFVEGYQDSS 739
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 8/343 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK--HEFTPTVKTYSILVRGLGDVGELSE 62
G++P + + L+ LCK + + K + P TY+ L+ G G
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +LF +M E +++ N+L++ +CK G + A EM+ G + +A +Y+ I
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALIS 471
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
AFC N+I+ + + M P+ Y +I LC ++ +A ++ ++ G +
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YN +++ C + ++ L+T M + V PD TYN ++ L + G F A++V
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEMLRNRLV 301
E M K G PSV TY ++H C KK ++E K F EM +PP + +L + L
Sbjct: 592 EKMIKEGLRPSVVTYGAIIHAYCSKK-NVDEGMKIFGEMCSTSKVPPNTVIYNILIDALC 650
Query: 302 GLGFLD----IIEILADKMERSTSCTIQELANAMRGKTGFRKS 340
+D ++E + K R + T + +R K K+
Sbjct: 651 RNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 2/258 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G P L+ LC + A K F+ Y++L+ G +
Sbjct: 489 MLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKK 548
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +L EM E D + +N+L+ + K G+ A ++ +M G P +Y
Sbjct: 549 LERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGA 608
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVP-NVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IHA+C ++ ++ M + VP N YN +I LC+N V+ A L+++M +
Sbjct: 609 IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +YNAIL D+ ++ A L+ RM +E PD T ++ + L VG ++
Sbjct: 669 RVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKL 728
Query: 239 TEVWESMEKRGFYPSVST 256
E + + S T
Sbjct: 729 KHFVEGYQDSSYPASSQT 746
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 11/267 (4%)
Query: 23 RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAH 82
+ H+ H+F + T K+ S+L++ L + ++++ LF++ L+ L H
Sbjct: 120 QTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARLVNDSLLLFNQ-LDPSSKSPQLCH 178
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS--VFRVLDSM 140
LL + K+G +A +L EM + +F V ++ +
Sbjct: 179 -GLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKL 237
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ P+ F ++ KLC ++K A+++L ++ G D S NA+L + ++
Sbjct: 238 GERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDI 297
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR------GFYPSV 254
L+ M K + P T+ +++ L + R D A +V++ + + G P V
Sbjct: 298 KRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDV 357
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMM 281
++ ++ GLC K GK E+ E M
Sbjct: 358 VLFNTLIDGLC-KVGKEEDGLSLLEEM 383
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 164/378 (43%), Gaps = 55/378 (14%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IKP++ ++ L K A F + + +P + TY+ ++ G G SEA+
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303
Query: 65 KLFDEMLERKCPVDI-----------------------------------LAHNSLLEAM 89
+L EM ERK D+ + +NS+++
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363
Query: 90 CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
K +D A M M + G PD ++SI I +C A + ++L M R LV N
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TY +I C+ + A LL EMI G P+ + N +L C+ ++ AL +
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483
Query: 210 MTKE-----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
M K +V PD TYN+++ L+ G+F A E++E M RG P TY+
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKME 317
++ GLCK+ +L+EA + F+ M +G P T L N +G + D +E+ +
Sbjct: 544 SVIDGLCKQS-RLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGR 602
Query: 318 RSTSCTIQELANAMRGKT 335
R +ANA+ +T
Sbjct: 603 RGI------VANAITYRT 614
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 7/324 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+ + G PS+ LLH LC V A FF H+ P V ++ L+ GL G
Sbjct: 137 ITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF----HQICKPNVIAFTTLMNGLCREGR 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYS 118
+ EA L D M+E + + + ++++ MCK G+ A +LR+M + +P+ YS
Sbjct: 193 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYS 252
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + + M+ + PN+FTYNC+I C + + EA +LL EM ER
Sbjct: 253 AIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER 312
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+PD +++ ++ + A L M ++P+ TYN ++ + R D A
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M +G P V T+S+++ G C K ++++ K M G+ + T L +
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAK-RVDDGMKLLHEMSRRGLVANTITYTTLIH 431
Query: 299 RLVGLGFLDIIEILADKMERSTSC 322
LG L+ L +M S C
Sbjct: 432 GFCQLGNLNAALDLLQEMISSGVC 455
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
MVE G++P+ ++ +CK A + P V YS ++ GL G
Sbjct: 203 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDG 262
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++A+ LF EM E+ ++ +N ++ C +G EA +LREM PD ++S
Sbjct: 263 RQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+A + + + M ++PN TYN +I K +++ A ++ M +
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD +++ ++ +C V+ ++L+ M++ ++ + TY ++ ++G + A
Sbjct: 383 GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ + M G P+V T + ++ GLC GKL++A + F++M
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLC-NNGKLKDALEMFKVM 484
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 18/283 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV----KVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M G P + L+ C K V K+ H+ ++ TY+ L+ G
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM---SRRGLVANTITYTTLIHGFCQ 435
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-------- 108
+G L+ A L EM+ +++ N+LL+ +C G + +A M + M+
Sbjct: 436 LGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495
Query: 109 ---GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
EPD +Y+I I + + M LVP+ TYN +I LCK ++
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+EA Q+ D M +G +PD ++ ++ +C V L + M + ++ + TY +
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ +VG + A ++++ M G YP T M+ GL K+
Sbjct: 616 IHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 658
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---------NAKHEFT---PTVKTYS 48
M+ G+ P++ + LL LC +K A + F +A H F P V+TY+
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL+ GL + G+ SEA +L++EM R D + +NS+++ +CK +DEA M M S
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD +++ I+ +C+ + V M R +V N TY +I C+ + A
Sbjct: 569 GFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGA 628
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ EMI G PD + +L + E+ A++ +
Sbjct: 629 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 34/328 (10%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEARKL 66
P + D +LL + + + V + P + +++IL++ +L A
Sbjct: 74 PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEA-------------------HGMLREMRS 107
F ++ + ++ ++LL +C + EA +G+ RE R
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRV 193
Query: 108 I------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV-PNVFTYNC 154
+ G +P+ +Y + C+ D S +L M+ + + PNV Y+
Sbjct: 194 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSA 253
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
II L K+ + +A L EM E+G +P+ ++YN ++ C + A RL+ M +
Sbjct: 254 IIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ PD T+++++ LV+ G+F A E++ M RG P+ TY+ M+ G K+ +L+ A
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF-SKQNRLDAA 372
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ F +M +G P T +L + G
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCG 400
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +M R+ P +I + L++ C + A ++ +G P ++S +H C
Sbjct: 98 LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + + + PNV + ++ LC+ +V EA LLD M+E G P++
Sbjct: 158 VEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 213
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y I+ C + AL L+ +M + + P+ Y+ ++ L + GR A ++
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M+++G P++ TY+ M++G C G+ EA + M + + P T +L N LV G
Sbjct: 274 MQEKGISPNLFTYNCMINGFC-SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEG 332
Query: 305 -FLDIIEILADKMERS 319
F + E+ + + R
Sbjct: 333 KFFEAEELYNEMLPRG 348
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 12/248 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ + L+H C+ ++ A P V T + L+ GL + G+L +A
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 64 RKLFDEMLERKCPVD-----------ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
++F M + K +D + +N L+ + G EA + EM G P
Sbjct: 478 LEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +Y+ I C+ + + ++ DSM P+V T+ +I CK +V + ++
Sbjct: 538 DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
EM RG + +Y ++ C +N AL + M V PD T +L L
Sbjct: 598 CEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 657
Query: 233 GRFDRATE 240
RA +
Sbjct: 658 EELKRAVQ 665
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSE 62
F ++ I D LL ALC+ K+V A K ++ K+++I++ G +V G E
Sbjct: 186 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPRE 245
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +++ EM D+++++S++ K G++++ + M+ EPD Y+ +H
Sbjct: 246 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 305
Query: 123 AFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A +A+ + ++ +M+ + PNV TYN +I+ LCK K EEA Q+ DEM+E+G
Sbjct: 306 ALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 365
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y+A + EV L+ +M K P TY M+++ L R FD +
Sbjct: 366 PTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLL 422
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
W+ M+++ P +S+Y VM+HGL GK+EEA Y++ M D+G+ P + +M+++
Sbjct: 423 WDEMKEKTVGPDLSSYIVMIHGLF-LNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 481
Query: 302 G 302
G
Sbjct: 482 G 482
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 42/258 (16%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
++S++ + K D A ++ EMR ++ + I I +C +D+ +
Sbjct: 124 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 183
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL---------------------------- 172
KR+ L + + ++ LC+ + V +A L+
Sbjct: 184 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 243
Query: 173 -------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EM G D SY+++++ + +N L+L RM KE + PDR YN V
Sbjct: 244 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 303
Query: 226 LKLLVRVGRFDRATEVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L + A + ++M E++G P+V TY+ ++ LCK + K EEA + F+ M+++
Sbjct: 304 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR-KTEEAKQVFDEMLEK 362
Query: 285 GIPP----YSSTVEMLRN 298
G+ P Y + + +LR
Sbjct: 363 GLFPTIRTYHAFMRILRT 380
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
E GI+P++ + L+ LCK + + A Q FD + PT++TY +R L GE
Sbjct: 326 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE-- 382
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L +M + C + + L+ +C+ + D + EM+ PD SY + I
Sbjct: 383 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 442
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPN 148
H I + MK + PN
Sbjct: 443 HGLFLNGKIEEAYGYYKEMKDKGMRPN 469
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 168/391 (42%), Gaps = 63/391 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+ + G P++ + LLH LC V A F H+ P V T++ L+ GL G
Sbjct: 41 LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF----HQMCKPNVVTFTTLMNGLCREGR 96
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR---------------- 103
+ EA L D M+E + + + ++++ MCK G+ A +LR
Sbjct: 97 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156
Query: 104 --------------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
EM+ G PD +YS I+ FC + R+L M
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ P+V T++ +I L K + A LL EMI G P+ + N +L CD ++ A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 204 LRLITRMTKE-----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
L + M K V PD TYN+++ L+ G+F A E++E M RG P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEI 311
TYS M++GLCK+ +L+EA + F+ M + P T L G + D +E+
Sbjct: 337 DTVTYSSMINGLCKQS-RLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 312 LADKMERSTSCTIQELANAMRGKT---GFRK 339
+ R +ANA+ T GFRK
Sbjct: 396 FCEMGRRGI------VANAITYITLIRGFRK 420
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 173/365 (47%), Gaps = 18/365 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVG 58
MVE G++P+ ++ +CK A + P V YS ++ GL G
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDG 166
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++A+ LF EM ++ DI+ ++ ++ C +G EA +L+EM PD ++S
Sbjct: 167 RHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE- 177
I+A + D++S +L M + PNV T N ++ LC + K+++A ++ M +
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 178 ----------RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G PD +YN +++ + + A L M ++PD TY+ ++
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L + R D AT++++SM + F P++ T++ ++ G C K G +++ + F M GI
Sbjct: 347 GLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC-KAGMVDDGLELFCEMGRRGIV 405
Query: 288 PYSST-VEMLRN-RLVG--LGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSE 343
+ T + ++R R VG G LDI + + + TI+ + + K +++ +
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAM 465
Query: 344 ETELE 348
EL+
Sbjct: 466 LEELQ 470
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 6/250 (2%)
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+ P DI + N L++ C + A ++ +G P +++ +H C + +
Sbjct: 10 QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ M + PNV T+ ++ LC+ +V EA LLD M+E G P++ +Y I+
Sbjct: 70 LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 194 HCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + AL L+ +M + ++ PD Y+ ++ L + GR A ++ M+ +G +P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
+ TYS M++G C GK EA + + M+ I P T L N LV G L+ + L
Sbjct: 186 DIVTYSCMINGFC-SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244
Query: 313 ADKMERSTSC 322
+M S C
Sbjct: 245 LQEMISSGVC 254
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 143/269 (53%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M F + P + L+ L K ++++FF D +V TY+I++ + G+
Sbjct: 208 MTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGD 267
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+ LF +M + DI+ +NSL++ K G +DE+ + EM+ +G EPD +Y+
Sbjct: 268 MVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNA 327
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + F L MK L PNV TY+ +I LCK +++A + L +M G
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVG 387
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+E++Y +++ +C ++ AL+L M + V + TY +L L + GR A
Sbjct: 388 LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAE 447
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ +M K G P++ TY+ +VHG K K
Sbjct: 448 DLFRAMIKAGVTPNLKTYTALVHGHIKNK 476
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 141/278 (50%), Gaps = 3/278 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV GI S++ + ++ +CK + A F K TP + TY+ L+ G G +G
Sbjct: 243 MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL 302
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E+ LF+EM + C D++ +N+L+ CK + +A L EM++ G +P+ +YS
Sbjct: 303 LDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYST 362
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + + L M+R L PN FTY +I CK + +A +L DEM++
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y +L C + A L M K V P+ TY ++ ++ R + A
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
E+ + ++++ P + Y ++ GLC + KLEE C++
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQN-KLEE-CEF 518
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+D + L L + + F+ + ++ P + L ++G L EA + F
Sbjct: 146 FDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCF 205
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
M + + N+ L + K G D ++ R+M G F+Y+I I C+
Sbjct: 206 SRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKE 265
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
D+ + + MK+ L P++ TYN +I K ++E++ L +EM + G PD +Y
Sbjct: 266 GDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITY 325
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
NA++ C ++ A + M + P+ TY+ ++ L + +A + M +
Sbjct: 326 NALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRR 385
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
G P+ TY+ ++ C K G L +A K + M+
Sbjct: 386 VGLSPNEFTYTSLIDANC-KAGYLSDALKLADEML 419
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 2/254 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ G+ P++ L+H K K V+ A + K + P + Y ++ GL +
Sbjct: 453 MIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNK 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E + EM + + + ++A K G EA +L+EM +G E ++ +
Sbjct: 513 LEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCV 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPN-VFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ + M +NL PN V +I LCKN +E A +L DEM ++
Sbjct: 573 LIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDK 632
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD+ +Y A++ + + AL + +RM++ + D H Y ++ L + +A
Sbjct: 633 NMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQA 692
Query: 239 TEVWESMEKRGFYP 252
M +G P
Sbjct: 693 RMFLNEMIGKGIVP 706
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPT-VKTYSILVRGLGDVG 58
M + G++ +I L+ LCK+ V+ A +F A P V + L+ GL
Sbjct: 558 MCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNN 617
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A+KLFDEM ++ D +A+ +L++ K + EA + M +G E D +Y+
Sbjct: 618 YIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYT 677
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ + N + L+ M +VP+ ++RK + ++EA +L DE++++
Sbjct: 678 SLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGM 101
T+ T+ +L+ GL G + EA F M + P ++ +L++ +CK I+ A +
Sbjct: 566 TIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKL 625
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM+ PD +Y+ I + D + M + ++ Y ++ L +
Sbjct: 626 FDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQ 685
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK--------- 212
V++A L+EMI +G PDE +L + + ++ A+ L + K
Sbjct: 686 GNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKKVPLDELLE 745
Query: 213 -ENVMPDR 219
+N+MP++
Sbjct: 746 EQNLMPEK 753
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
Query: 6 IKPSIYDLDQLLHALCK---RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
+KP++ L+ L+ AL + + V ++ F D K T++IL+ G +LS
Sbjct: 6 LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA L +M C D +++N++L+ +CK G ++EA +L +M++ G P+ +++I +
Sbjct: 66 EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+C+ + V+D M R N++P+V TY +I LCK+ K++EA++L DEM
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN ++ + + LI M + V P+ TYN+V+K V+ G+ D A
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
ME+ GF P T++ + +G C K G+L EA + + M +G+ S T+ + + L
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYC-KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304
Query: 302 GLGFLD 307
G LD
Sbjct: 305 GERKLD 310
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M F P + +L LCK+ + A D + P T++ILV G +G
Sbjct: 74 MKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGW 133
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ D M D+ + +L+ +CK G IDEA + EM ++ P +Y++
Sbjct: 134 LKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNM 193
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ E + F ++D M+ + PN TYN +++ K K++ A L +M E G
Sbjct: 194 LINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG 253
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++N + +C ++ A R++ M+++ + + T N +L L + D A
Sbjct: 254 FSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY 313
Query: 240 EVWESMEKRGFY-------------------------------PSVSTYSVMVHGLCKKK 268
++ S KRG++ PS+ TY M+ GLC +
Sbjct: 314 KLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLC-RS 372
Query: 269 GKLEEACKYFEMMVDEGIPPYSST 292
GK +++ +++ G+ P +T
Sbjct: 373 GKTDQSIDKCNELLESGLVPDQTT 396
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+K + L+ +LH LC + + A++ +A K + +Y L+ G VG+
Sbjct: 288 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK---- 343
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+DEM E++ I+ + +++ +C++G D++ E+ G PD +Y+ I
Sbjct: 344 SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILG 403
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + F + M + + P++FT N ++R LC +++A +L I +G D
Sbjct: 404 YCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAID 463
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N I++ C+ A L+ M ++ + PD +T+N +L L GR A E
Sbjct: 464 AVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMS 523
Query: 244 SMEKRG 249
+ ++G
Sbjct: 524 GIVEQG 529
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF K+++I++ G G L +
Sbjct: 209 DYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRD 268
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++++++++ K D+ + + A+ K G I A + ++M G PD + I
Sbjct: 269 AQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIID 328
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I + M +V TYN +I+ +CK +++E+ Y+LLD+M +G +P
Sbjct: 329 QLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSP 388
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ IL +V + L+ RM + D YN++L L ++ ++W
Sbjct: 389 NNRTYSYILKTTEKPKDV---IALMQRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQIW 445
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+RG P ++++MVHGL +GKL+EA +Y+ M G+ P T
Sbjct: 446 DEMERRGSGPDQRSFTIMVHGL-HSQGKLDEALQYYTTMKSRGMIPEPRT 494
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E GI P + + ++ LC +K ++
Sbjct: 311 MWEKGINPDVAICNCIIDQLCFKK----------------------------------KI 336
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++F EM +R C D+ +N+L++ MCK +++ + +L +M + G P+ +YS
Sbjct: 337 PEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYI 396
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + D V ++ M+R + YN I+ K + + Q+ DEM RG+
Sbjct: 397 LKTTEKPKD---VIALMQRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGS 453
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
PD+ S+ ++ + +++ AL+ T M ++P+ T
Sbjct: 454 GPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRT 494
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 153/343 (44%), Gaps = 39/343 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M +FGIKP++ + +L + CK V A + + P TY++LV GL GE
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA--------- 110
L +A+ L +EML V +N L+ C+ G EA ++ EM + A
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325
Query: 111 --------------------------EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
PD S++ ++ +C I F + D +K +
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR-AEVNMA 203
LVP V TYN +I LC ++ A +L EM ++G PD ++Y IL C + V+MA
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTY-TILVNGCFKLGYVSMA 444
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
M + + PDR YN + +++ A + E M GF P V TY+V VH
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHA 504
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
LC ++G EEAC E MV +G+ P T + N V G L
Sbjct: 505 LC-QQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 10/290 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLGDVGELSE 62
P++ + L+H LC ++ A + K E T P + TY+ILV G +G +S
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRL----KKEMTDQGLFPDIFTYTILVNGCFKLGYVSM 443
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR F+EML + D A+N+ + K + A M EM + G PD +Y++F+H
Sbjct: 444 ARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVH 503
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+ + +L++M L+P+ TY II KN + +A ++ +EM+ +G P
Sbjct: 504 ALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y ++ H + +++A ++M +++V + TYN ++ L R D A + +
Sbjct: 564 SVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYF 623
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME++G P+ +Y+++++ C G EEA + + M+D I P S T
Sbjct: 624 DEMEEKGILPNKFSYTILINESC-NMGYWEEALRLYREMLDRKIQPDSFT 672
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ + L++ LCK V V +F D K +FTP + +++ L+ G G +SEA L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
FDE+ R ++ +N+L+ +C G +D A + +EM G PD F+Y+I ++ +
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + M L P+ F YN I K A+ + +EM+ G PD +
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN + C + A L+ M + ++PD TY ++ V+ G +A EV+ M
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+G PSV TY+V++H K+ L+ A YF M+++ +P T + N L
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQ-MLDLAFMYFSKMLEKSVPANVITYNAIINGL 610
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + + +++L L + A + + PTV TY+ ++ G
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L EM ER C + + +N L+ + K G +++A G++ EM + G A++Y+
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ F +++ M P + TYN ++ LCK +V +M++
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD S+N++L +C ++ A L + +++P TYN ++ L G D A
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M +G +P + TY+++V+G C K G + A +F M+ +G+ P
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNG-CFKLGYVSMARGFFNEMLSKGLKP 458
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 145/292 (49%), Gaps = 1/292 (0%)
Query: 25 HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
HV F ++ P VK + ++R L D LS+A+ ++ M + ++ +N+
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+L++ CK G +D+A +L EM+ G P+ +Y++ ++ + ++ +++ M
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L + +TYN +I C+ EA+ L++EM+ R A P +YN ++ C +V
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K PD ++N +L R G A +++ ++ R P+V TY+ ++HGL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
C G L+ A + + M D+G+ P T +L N LG++ + ++M
Sbjct: 401 C-MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 94/192 (48%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P V TY++ V L G EA L + M+ D + + S++ K G++ +A
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ EM S G P +Y++ IHA + F M ++ NV TYN II L
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C +++EAY+ DEM E+G P+++SY ++ C+ ALRL M + PD
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
Query: 220 HTYNMVLKLLVR 231
T+++ LK L R
Sbjct: 671 FTHSVFLKNLHR 682
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+ P +++ K H++ A + F+ + P+V TY++L+
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A F +MLE+ P +++ +N+++ +C +DEA+ EM G P+ FSY+I
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ C R+ M + P+ FT++ ++ L ++ +V A Q ++ +I+
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQV-HAVQCVESLIQ 697
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI L LL+ C K + A D + + P T++ L+ GL +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M++R C +++ + ++ +CK G+ID A +L +M + E + YS
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M+ + PNV TY+ +I LC E+ +A +LL +MIER
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ ++NA++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E M + +P+V TY+ +++G CK K +++E + F M G+ + T L
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAK-RIDEGVELFREMSQRGLVGNTVTYTTL 441
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 153/289 (52%), Gaps = 12/289 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ ++ ++ +LCK +H A F +++ P V TYS L+ L + S+A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK +++ N+L++A K G + EA + EM +PD F+YS I+ F
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + + + M + PNV TYN +I CK ++++E +L EM +RG +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 185 WSYNAIL-----AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ A CD A++ + +M + V P+ TYN +L L + G+ ++A
Sbjct: 436 VTYTTLIHGFFQARDCDNAQM-----VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E +++ P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 538
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M K +++ ++++++++CK + D+A + EM + G P+ +YS
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T+N +I K K+ EA +L DEMI+R
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TYN ++ + R D
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + A F+ MV +G+ P T L +
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-DCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ ++ + ++RS
Sbjct: 480 LCKNGKLEKAMVVFEYLQRS 499
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ L+ LC + A + D + + P V T++ L+ G+L EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I+
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A I + M + LV N TY +I + + A + +M+ G +P+
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S+ +G P V Y+ M+ G C +KG EEA F M ++G P S T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFC-RKGLKEEADALFRKMREDGPLPDSGT 577
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 147/327 (44%), Gaps = 37/327 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI++ ++LL A+ K K + + + + + TY+IL+ ++S A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ +SLL C I +A ++ +M +G PD +++ IH
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD------------- 173
N ++D M + PN+ TY ++ LCK ++ A+ LL+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 174 ----------------------EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
EM +G P+ +Y+++++ C+ + A RL++ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P+ T+N ++ V+ G+ A ++++ M KR P + TYS +++G C +L
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD-RL 381
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRN 298
+EA FE+M+ + P T L N
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLIN 408
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M ++ +N L+ C+ I A +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R ++++A L+ +M + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ V+ L + D A ++ ME +G P+V TYS ++ LC + + +A + M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE-RWSDASRLLSDM 321
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS I ++ + G
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 9/274 (3%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL + +L +A LF M++ + I N LL A+ K D + +M+ +
Sbjct: 56 ILRNGLHSM-KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + ++Y+I I+ FC + I +L M + P++ T + ++ C +++ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD ++ ++ + + A+ L+ RM + P+ TY +V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME +V YS ++ LCK + + ++A F M ++G+ P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-DDALNLFTEMENKGVRP 293
Query: 289 ----YSSTVEMLRNRLVGLGFLDIIEILADKMER 318
YSS + L N + D +L+D +ER
Sbjct: 294 NVITYSSLISCLCNY---ERWSDASRLLSDMIER 324
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y I+R + K+++A L M++ P + +N +L+ + ++ + L +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + + +TYN+++ R + A + M K G+ PS+ T S +++G C K ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RI 171
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A + MV+ G P + T L
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTL 196
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE I P+++ LL+ LC+ K+A + F K P TY L++ L GE
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ E + P D++ +++ +CKA +D+A + EMR +G P+ +YS
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSN 233
Query: 120 FIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+H F + ++ V R + K R Y + LCK ++ A + ++E+ +
Sbjct: 234 LVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQS 293
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y+ ++ + + +L L+ M + V PD TY+ ++ +L + +F A
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ E ME G P+V TY+ ++ GLC K GK++E + +EMM+ P T ++ N
Sbjct: 354 FRLLELMEAAGSPPNVVTYNSVMDGLC-KSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMN 412
Query: 299 RLVGLGFLD 307
L G LD
Sbjct: 413 GLSKAGMLD 421
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 142/268 (52%), Gaps = 3/268 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + A +F + + P TYS LV G GEL + F+E RK
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 75 C-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
++ A+ L+A+CKAG +D A + E+R G PD +YS+ I+ F A +
Sbjct: 259 GGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDAS 318
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+L+ M+R + P+V TY+ +I LCK K ++A++LL+ M G+ P+ +YN+++
Sbjct: 319 LELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDG 378
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C +++ R+ M K PD TY++++ L + G D A +++E ++ P
Sbjct: 379 LCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPD 438
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ YS+++ LC + GKLEEAC + M
Sbjct: 439 AAAYSMVITSLC-RAGKLEEACGMYHGM 465
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 161/314 (51%), Gaps = 3/314 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P+++ + ++ LC+ V A++ + E P V TY+IL+ GL + AR++
Sbjct: 86 PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F EM C + + + +L++ + +AG IDEA ++ E RS+ D + + + C+
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEW 185
A+ + + ++ M++ + PN TY+ ++ ++ +++ + +E R G + +
Sbjct: 206 ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAA 265
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y L C ++ A + + + + V+PD TY+M++ R G+FD + E+ E M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ G P V TYS +++ LCK++ K ++A + E+M G PP T + + L G
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKER-KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 306 LDIIEILADKMERS 319
+D + + + M +S
Sbjct: 385 MDEVHRVYEMMLKS 398
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 2/235 (0%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
+ +++L L + SE +LF + R + +++ +C AG ++A ++RE
Sbjct: 20 QAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRE 79
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
+ + P F Y+ I C A+ + ++VL+ M ++VPNVFTY ++ LC++ K
Sbjct: 80 LSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ A ++ EM G P+ +Y ++ + E++ ALR++ + D T
Sbjct: 139 TKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTT 198
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++ L + R D A + E M + G P+ TYS +VHG ++ G+L+ ++FE
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF-RQHGELDRVIRFFE 252
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
R + G + D+ ++++ + V R+ + +V TY ++ LC
Sbjct: 8 RSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67
Query: 163 EKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+A +L+ E+ G P + YN I+ C + V A +++ +M +E+++P+ T
Sbjct: 68 GMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
Y ++L L R + A EV++ M++ G P+ TY ++ L + G+++EA +
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHL-SRAGEIDEALR 179
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE I P+++ LL+ LC+ K+A + F K P TY L++ L GE
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ E + P D++ +++ +CKA +D+A + EMR +G P+ +YS
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSN 233
Query: 120 FIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+H F + ++ V R + K R Y + LCK ++ A + ++E+ +
Sbjct: 234 LVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQS 293
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y+ ++ + + +L L+ M + V PD TY+ ++ +L + +F A
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ E ME G P+V TY+ ++ GLC K GK++E + +EMM+ P T ++ N
Sbjct: 354 FRLLELMEAAGSPPNVVTYNSVMDGLC-KSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMN 412
Query: 299 RLVGLGFLD 307
L G LD
Sbjct: 413 GLSKAGMLD 421
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 142/268 (52%), Gaps = 3/268 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + A +F + + P TYS LV G GEL + F+E RK
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 75 C-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
++ A+ L+A+CKAG +D A + E+R G PD +YS+ I+ F A +
Sbjct: 259 GGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDAS 318
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+L+ M+R + P+V TY+ +I LCK K ++A++LL+ M G+ P+ +YN+++
Sbjct: 319 LELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDG 378
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C +++ R+ M K PD TY++++ L + G D A +++E ++ P
Sbjct: 379 LCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPD 438
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ YS+++ LC + GKLEEAC + M
Sbjct: 439 AAAYSMVITSLC-RAGKLEEACGMYHGM 465
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 161/314 (51%), Gaps = 3/314 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P+++ + ++ LC+ V A++ + E P V TY+IL+ GL + AR++
Sbjct: 86 PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F EM C + + + +L++ + +AG IDEA ++ E RS+ D + + + C+
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEW 185
A+ + + ++ M++ + PN TY+ ++ ++ +++ + +E R G + +
Sbjct: 206 ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAA 265
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y L C ++ A + + + + V+PD TY+M++ R G+FD + E+ E M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+ G P V TYS +++ LCK++ K ++A + E+M G PP T + + L G
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKER-KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 306 LDIIEILADKMERS 319
+D + + + M +S
Sbjct: 385 MDEVHRVYEMMLKS 398
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 2/235 (0%)
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
+ +++L L + SE +LF + R + +++ +C AG ++A ++RE
Sbjct: 20 QAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRE 79
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
+ + P F Y+ I C A+ + ++VL+ M ++VPNVFTY ++ LC++ K
Sbjct: 80 LSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+ A ++ EM G P+ +Y ++ + E++ ALR++ + D T
Sbjct: 139 TKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTT 198
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++ L + R D A + E M + G P+ TYS +VHG ++ G+L+ ++FE
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF-RQHGELDRVIRFFE 252
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
R + GA+ D+ ++++ + V R+ + +V TY ++ LC
Sbjct: 8 RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67
Query: 163 EKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+A +L+ E+ G P + YN I+ C + V A +++ +M +E+++P+ T
Sbjct: 68 GMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFT 125
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
Y ++L L R + A EV++ M++ G P+ TY ++ L + G+++EA +
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHL-SRAGEIDEALR 179
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 150/341 (43%), Gaps = 45/341 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHA-----LCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGL 54
M+ G P D+ LH L K K VK A + F K F P Y+ ++ GL
Sbjct: 215 MMAMGFVPP----DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL 270
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G EA K+ D ML + C + + L+ ++CKAG ++ A + R M + G P++
Sbjct: 271 AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
Y+ IH F ++ + + D M P+V T+ +I LCK+ E+A + +E
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+ G P+ +Y I+ V A R++ M PD TY +L ++GR
Sbjct: 391 MMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGR 450
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCK---------------------------- 266
D A ++ + ++K P++ YS +V GLC
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC 510
Query: 267 -------KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
K G+L+EAC+ F+ MV EG P ++T +L N L
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 134/257 (52%), Gaps = 6/257 (2%)
Query: 16 LLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+++LCK ++ A + F A F P Y+ L+ G G + EA LFDEM+E
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++ H +++ +CK+GN ++A EM G +P+ +Y+ I + + + F
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R++ M + P+ TY C++ CK +++EA QLLDE+ + ++P+ Y++++
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480
Query: 195 CDRAEVNMALRLITRMTK---ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
CD V L + +K EN+ P ++ L + GR D A +++ M G
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCS--IIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 252 PSVSTYSVMVHGLCKKK 268
P +TY+++++GLC+ +
Sbjct: 539 PDATTYNILINGLCRSR 555
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 153/346 (44%), Gaps = 40/346 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P + ++ LCK + + A + F+ + P V TY+ +++GL +G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A ++ M+ C D + + LL+ CK G +DEA +L E+ + P+ YS
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 120 FIHAFCEANDIHSVF------------------------------------RVLDSMKRY 143
+ C+ + + R+ M
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 144 NLVPNVFTYNCIIRKLCKN--EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
P+ TYN +I LC++ +VE A+ LL ++ G PD +Y + C EV+
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
A++++ + D Y + L G+ DRA +++ M ++G P + Y ++
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+GL K K KLE+ACK+F+ M+ +G P +T L L G +D
Sbjct: 656 NGLIKGK-KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD 700
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF---FDNAKHEFTPTVKTYSILVRGLGDV 57
MV G KP + L++ LC+ + +V F D + P TY+ L GL +
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GE+ A K+ +E R D++A+ +L +C G +D A + +EM G PDA +Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ + + + D M P V TY +++ LC V+EA+ + M+
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA 711
Query: 178 RGANPDE-WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG Y+A++ C +V+ AL+L M +P T + LVR G+ +
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCK--KKGKL 271
+A E+ + M G P +T++ ++ GL K + GKL
Sbjct: 772 KAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 7/296 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
KP ++ L+ LCK + A + F A P ++ +VR L + EAR
Sbjct: 186 KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR 245
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F +M + P D +A+N++++ + KAG+ EA +L M + P +Y I +++
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+A + + M PN Y +I K+ +++EA L DEM+E G PD
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++ ++ C A + M + P+ TY +++ L ++GR A + +
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M G +P TY ++ G C K G+L+EA + + + P YSS V+ L
Sbjct: 426 MIAHGCFPDSVTYICLLDGFC-KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 154/374 (41%), Gaps = 74/374 (19%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G P LL CK + A Q D K +P ++ YS LV+GL D G
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGS 485
Query: 60 LSEA-RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ LF++ +D S++ +CK G +DEA + + M S G +PDA +Y+
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 119 IFIHAFCEA--NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I I+ C + N + F +L ++ +P+ TY + LCK +V+ A ++L+E
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
RG N D +Y A+ C + +V+ A+ L M ++ PD Y ++ L++ + +
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLE 665
Query: 237 RATEVWESMEKRGFYPSVSTYSVMV----------------------------------- 261
A + ++ M +G P+V+TY+ +V
Sbjct: 666 DACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDAL 725
Query: 262 -HGLCK----------------------------------KKGKLEEACKYFEMMVDEGI 286
HG CK + GK E+A + + M G
Sbjct: 726 IHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGS 785
Query: 287 PPYSSTVEMLRNRL 300
PP+++T + + L
Sbjct: 786 PPHAATFTAILDGL 799
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 3/304 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
+ G + ++ + L++ L K+ + + K P +++IL+R
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYSIF 120
+A F+ M ++C D+ L++ +CKAG ++A + EM ++G PD ++
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A + V M++ P+ YN +I L K +EA ++LD M+ +
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P E +Y ++ C + A L M P+ Y ++ + GR A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++ M + G+ P V T++VM+ GLC K G E+A K FE M+ G P T + L
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLC-KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 301 VGLG 304
+G
Sbjct: 411 SKIG 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + D F+Y+ ++ + + + + M + + PN F++N +IR + + ++A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLK 227
+ M + PD ++ ++ C A + M V PDR + +++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
L++ R A EV+ MEK GF P Y+ M+ GL K G +EA K + M+ +
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL-AKAGHAQEALKVLDNMLAKACV 292
Query: 288 PYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
P T +L N L G L+ E L M S
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
M+ G KP++ L+ ALC +V A F+ A+ E +V Y L+ G
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL 733
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A KLF++M+ R + SL + + ++G ++A +L+EM + G+ P A +++
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793
Query: 119 IFIHAFCEANDIHSVFRVL 137
+ ++++ + +++
Sbjct: 794 AILDGLRKSDESGKLLKLV 812
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 158/303 (52%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + L+ + + K ++ F+ K + TP V++YSIL+ GL G
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGF 601
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ KLF EM E+ +D A+N +++ CK+G +++A+ +L EM++ G +P +Y
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGS 661
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +L+E++++G
Sbjct: 662 VIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG 721
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E++ AL M P+ TY++++ L +V +F++A
Sbjct: 722 LTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAF 781
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
W+ M+K+G P+ TY+ M+ GL + G + EA FE G P Y++ +E
Sbjct: 782 VFWQEMQKQGLKPNTITYTTMISGLA-RVGNVLEAKDLFERFKSSGGIPDSACYNAMIEG 840
Query: 296 LRN 298
L N
Sbjct: 841 LSN 843
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 153/302 (50%), Gaps = 2/302 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M E G+ P+I ++ ++ LCK + + A F H+ TP T+ L+ GLG G+
Sbjct: 437 MKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGK 496
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L+++ML+ + + + SL+ K G ++ H + +EM G PD +
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNN 556
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ +A +I + + +K L P+V +Y+ +I L K ++ Y+L EM E+G
Sbjct: 557 YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN ++ C +VN A +L+ M + + P TY V+ L ++ R D A
Sbjct: 617 LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAY 676
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E + + +V YS ++ G K G+++EA E ++ +G+ P + T L +
Sbjct: 677 MLFEEAKSKAVDLNVVVYSSLIDGF-GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDA 735
Query: 300 LV 301
LV
Sbjct: 736 LV 737
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 145/304 (47%), Gaps = 3/304 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS +++ + K + ++ A + K +F P Y+ L+ L E
Sbjct: 162 GFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPM 221
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M E V + +L+ + G +D A +L EM+S D Y++ I
Sbjct: 222 LTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDC 281
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + + ++ +K LVP+ T+ +I LCK E+V+EA +L +E+ + P
Sbjct: 282 FGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC 341
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++ + + N A L+ R ++ +P YN +L L R G+ + A + E
Sbjct: 342 VYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE 401
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+M K P++++Y++++ LC K G+LE A K + M + G+ P TV ++ +RL
Sbjct: 402 AM-KMDAAPNLTSYNILIDMLC-KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKA 459
Query: 304 GFLD 307
LD
Sbjct: 460 QRLD 463
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L ++ V+ A + + K + P + +Y+IL+ L GEL A
Sbjct: 372 GCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAAL 431
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ D M E +I+ N +++ +CKA +DEA + + PD+ ++ I
Sbjct: 432 KVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGL 491
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
++ + + + M PN Y +IR K + E+ +++ EM+ RG +PD
Sbjct: 492 GRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDL 551
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E+ L + + + PD +Y++++ LV+ G +++
Sbjct: 552 MLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYE 611
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G + Y++++ G C K GK+ +A + E M +G+ P Y S ++ L
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFC-KSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ + ++ CK V A+Q + K + PTV TY ++ GL +
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF+E + ++++ ++SL++ K G IDEA+ +L E+ G P+ ++++
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A +A +I +MK PN TY+ ++ LCK K +A+ EM ++G
Sbjct: 732 LLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG 791
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ V A L R +PD YN +++ L + A
Sbjct: 792 LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAY 851
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
++E +G T V++ L K LE+A
Sbjct: 852 ILFEETRLKGCRIYSKTCVVLLDAL-HKADCLEQA 885
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
A+N+LL M + N++ +L EM G P + + +F ++ + F V+++M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+++ P Y +I L + + LL +M E G + ++ V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ AL L+ M + D YN+ + +VG+ D A + + ++ +G P T++ M
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313
Query: 261 VHGLCKKKGKLEEACKYFE 279
+ LCK + +++EA + FE
Sbjct: 314 IGVLCKAE-RVDEAVELFE 331
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 159/299 (53%), Gaps = 7/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P++ + L++ CKR ++ A + P +TY+ L++G
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RN 442
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + ++MLERK D++ +NSL++ C++GN D A+ +L M G PD ++Y+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTS 502
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C++ + + DS+++ +++PNV Y +I CK KV EA+ +L++M+ +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKN 562
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++NA++ C ++ A L +M K ++ P T +++ L++ G FD A
Sbjct: 563 CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
++ M G P TY+ + C ++G+L++A M + G+ P YSS ++
Sbjct: 623 RRFQQMLSSGTKPDAHTYTTFIQTYC-REGRLQDAEDMVAKMKENGVSPDLFTYSSLIK 680
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 153/323 (47%), Gaps = 36/323 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E + P+IY +++++ CK +V+ A+Q+ + P TY+ L+ G +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A K+F EM + C + +A+ L+ +C IDEA + +M+ P +Y++
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + ++ M+ + PN+ TY +I LC K+E+A +LL +M+E+G
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388
Query: 180 ANPDEWSYNAILAYHCDRA----------------------------------EVNMALR 205
P+ +YNA++ +C R V+ A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG 448
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ +M + V+PD TYN ++ R G FD A + M RG P TY+ M+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508
Query: 266 KKKGKLEEACKYFEMMVDEGIPP 288
K K ++EEAC F+ + + + P
Sbjct: 509 KSK-RVEEACDLFDSLEQKDVIP 530
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ Y+ L+ L G + E ++++ EMLE K +I +N ++ CK GN++EA+ +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+ G +PD F+Y+ I +C+ D+ S F+V M N Y +I LC
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++EA L +M + P +Y ++ C + AL L+ M ++ + P+ HTY
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ L + ++A E+ M ++G P+V TY+ +++G C K+G +E+A E+M
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDALDVVELMES 421
Query: 284 EGIPPYSST 292
+ P + T
Sbjct: 422 RNLRPNTRT 430
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 19/350 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E + P + + L+ C+ + A++ P TY+ ++ L
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD + ++ +++ + +L++ CKAG ++EAH ML +M S P++ +++
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + + M + +L P V T +I +L K+ + AY+ +M+ G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y + +C + A ++ +M + V PD TY+ ++K +GR + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692
Query: 240 EVWESMEKRGFYPSVSTY-SVMVHGLCKKKGKLEEA----------------CKYFEMMV 282
V + M G PS T+ S++ H L K GK++ + E MV
Sbjct: 693 VVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA-NAM 331
+ G+ P + + E L + +G L + E + D M++ + EL NA+
Sbjct: 753 EHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNAL 802
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 5/264 (1%)
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
DE E K + I +N+LL ++ + G +DE + EM P+ ++Y+ ++ +C+
Sbjct: 172 DESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKV 231
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
++ + + + L P+ FTY +I C+ + ++ A+++ EM +G +E +Y
Sbjct: 232 GNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY 291
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C ++ A+ L +M ++ P TY +++K L R A + + ME+
Sbjct: 292 THLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE 351
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF-- 305
+G P++ TY+V++ LC + KLE+A + M+++G+ P T L N G
Sbjct: 352 KGIKPNIHTYTVLIDSLC-SQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 306 --LDIIEILADKMERSTSCTIQEL 327
LD++E++ + R + T EL
Sbjct: 411 DALDVVELMESRNLRPNTRTYNEL 434
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 56/344 (16%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + L+H LC +K A + K + PTV T +IL+ L G+ A +
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +ML D + + ++ C+ G + +A M+ +M+ G PD F+YS I + +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 127 ANDIHSVFRVL------------------------------------------------- 137
+S F VL
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744
Query: 138 ----DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILA 192
+ M + + PN +Y ++ +C+ + A ++ D M ++ G +P E +NA+L+
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + N A +++ M +P + +++ L + G +R T V++++ + G+Y
Sbjct: 805 CCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYD 864
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +++ G+ K+G +E + F +M G S T +L
Sbjct: 865 DELAWKIIIDGV-GKQGLVEAFYELFNVMEKNGCTFSSQTYSLL 907
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 24/285 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G KP + + C+ ++ A K +P + TYS L++G GD+G
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGR 687
Query: 60 LSEARKLFDEMLERKCP------VDILAHNSLLE-----------AMCKAGNI---DEAH 99
+ A + M + C + ++ H LLE +C N+ D
Sbjct: 688 TNSAFVVLKRMHDTGCEPSQHTFLSLIKH--LLEMKYGKVKGGEPGVCVMSNMMEFDIVV 745
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRK 158
+L +M G P+A SY + CE ++ +V D M+ + + P+ +N ++
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSC 805
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
CK EK EA +++D+MI G P S ++ + E + + + D
Sbjct: 806 CCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDD 865
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ +++ + + G + E++ MEK G S TYS+++ G
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + P+++ + L++ C + A + D K P V TY+ L+ G +
Sbjct: 309 MTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRD 368
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SE L +EM ++ + + +N +L+ MCK GN+ EA L +M G PD +Y+
Sbjct: 369 SSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNT 428
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+A + FR++D M L + +T N I+ LC +K++EAY LL +RG
Sbjct: 429 LIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRG 488
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE SY ++ + + + AL L M + +MP TYN V+ L + + D+A
Sbjct: 489 YILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAI 548
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M + G P +TY++++HG C +G +E+A ++ M++ P T +L
Sbjct: 549 DKLNEMLENGLVPDETTYNIIIHGFC-LEGNVEKAFQFHNEMIENLFKPDVYTCNILLRG 607
Query: 300 LVGLGFLD 307
L G L+
Sbjct: 608 LCREGMLE 615
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 157/293 (53%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ + + L+ C+ +K A + + ++ PTV TY++LV G + G++ EA
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ DEM + D++ +N+L++ + + E + ++ EM G + +A +Y+I +
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ LD M+ L P+ TYN +I CK K+ +A++++DEM +G D
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
W+ N IL C +++ A L+ +K + D +Y +++ + + DRA +W+
Sbjct: 458 TWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWD 517
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M++R PS TY+ ++ GLC+ + K+++A M++ G+ P +T ++
Sbjct: 518 EMKERQIMPSTITYNSVIGGLCQSR-KVDQAIDKLNEMLENGLVPDETTYNII 569
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 151/290 (52%), Gaps = 5/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK---RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGD 56
M +P++ + L+++L + + +A Q D+ K P +++IL+ G
Sbjct: 166 MKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCL 225
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
++ +A ++M E C D +++N++L+A+ K + EA +L +M+S G P+ +
Sbjct: 226 ESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHT 285
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y++ + +C + +V++ M R NL+P V+TYN ++ C + K++EA+++ DEM
Sbjct: 286 YNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+ PD +YN ++ + + LI M K+ V + TYN++LK + + G
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
AT + ME+ G P TY+ ++ C K GK+ +A + + M +G+
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYC-KAGKMGKAFRMMDEMTSKGL 454
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+K + L+ +LH LC K + A+ +A K + +Y IL+ G +
Sbjct: 449 MTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEK 508
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L+DEM ER+ + +NS++ +C++ +D+A L EM G PD +Y+I
Sbjct: 509 GDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNI 568
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH FC ++ F+ + M P+V+T N ++R LC+ +E+A +L + ++ +G
Sbjct: 569 IIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN I++ C + A L+T M + + PD++TY +++ L GR A
Sbjct: 629 KDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAE 688
Query: 240 EVWESMEKRGF 250
E M + G
Sbjct: 689 EFTLKMVESGI 699
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 134/275 (48%), Gaps = 4/275 (1%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGE 59
++ G+ P+ + L++ C VK A + N EF P +Y+ ++ L
Sbjct: 205 IKLGVVPNTNSFNILIYGYCLESKVKDALDWV-NKMSEFGCVPDTVSYNTILDALLKRRL 263
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR L +M + + +N L+ C+ G + EA ++ M P ++Y++
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNM 323
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC I FR+ D M++ N++P+V TYN +I + E Y L++EM ++G
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKG 383
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN IL + C + + A + +M + + PD TYN ++ + G+ +A
Sbjct: 384 VKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAF 443
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ + M +G T + ++H LC +K KL+EA
Sbjct: 444 RMMDEMTSKGLKIDTWTLNTILHCLCVEK-KLDEA 477
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCK---AGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A ++F++M ++L N+L+ ++ + + +I A +L++ +G P+ S++I
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + + ++ M + VP+ +YN I+ L K ++EA LL +M +G
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++ +YN ++ +C + A ++I MT+ N++P TYNM++ G+ D A
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + MEK P V TY+ ++ G C + E E M +G+ + T ++
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDG-CSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397
Query: 300 LVGLGFLDIIEILADKMERS 319
+ G + DKME +
Sbjct: 398 MCKKGNMTEATTTLDKMEEN 417
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
SLL + + E H ++ EP I A+ + + H ++ + MKR
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169
Query: 144 NLVPNVFTYNCIIRKLCK---NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
N PN+ T N ++ L + + + A Q+L + I+ G P+ S+N ++ +C ++V
Sbjct: 170 NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKV 229
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
AL + +M++ +PD +YN +L L++ A ++ M+ +G P+ TY+++
Sbjct: 230 KDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNML 289
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
V G C + G L+EA K E+M + P T ML N G +D + D+ME+
Sbjct: 290 VCGYC-RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEK 346
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 151/342 (44%), Gaps = 37/342 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M +FGIKP++ + +L + CK V A + + P TY++LV GL GE
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA--------- 110
L +A+ L +EML V +N L+ C+ G EA ++ EM + A
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325
Query: 111 --------------------------EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
PD S++ ++ +C I F + D +K +
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
LVP V TYN +I LC ++ A +L EM ++G PD ++Y ++ V+MA
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
M + + PDR YN + +++ A + E M GF P V TY+V VH L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
C ++G EEAC E MV +G+ P T + N V G L
Sbjct: 506 C-QQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 10/290 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLGDVGELSE 62
P++ + L+H LC ++ A + K E T P + TY+ILV G +G +S
Sbjct: 388 PTVITYNTLIHGLCMWGYLDAALRL----KKEMTDQGLFPDIFTYTILVNGCFKLGYVSM 443
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR F+EML + D A+N+ + K + A M EM + G PD +Y++F+H
Sbjct: 444 ARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVH 503
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+ + +L++M L+P+ TY II KN + +A ++ +EM+ +G P
Sbjct: 504 ALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y ++ H + +++A ++M +++V + TYN ++ L R D A + +
Sbjct: 564 SVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYF 623
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME++G P+ +Y+++++ C G EEA + + M+D I P S T
Sbjct: 624 DEMEEKGILPNKFSYTILINESC-NMGYWEEALRLYREMLDRKIQPDSFT 672
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ + L++ LCK V V +F D K +FTP + +++ L+ G G +SEA L
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
FDE+ R ++ +N+L+ +C G +D A + +EM G PD F+Y+I ++ +
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + M L P+ F YN I K A+ + +EM+ G PD +
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN + C + A L+ M + ++PD TY ++ V+ G +A EV+ M
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+G PSV TY+V++H K+ L+ A YF M+++ +P T + N L
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQ-MLDLAFMYFSKMLEKSVPANVITYNAIINGL 610
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + + +++L L + A + + PTV TY+ ++ G
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L EM ER C + + +N L+ + K G +++A G++ EM + G A++Y+
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ F +++ M P + TYN ++ LCK +V +M++
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD S+N++L +C ++ A L + +++P TYN ++ L G D A
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M +G +P + TY+++V+G C K G + A +F M+ +G+ P
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNG-CFKLGYVSMARGFFNEMLSKGLKP 458
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 145/292 (49%), Gaps = 1/292 (0%)
Query: 25 HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
HV F ++ P VK + ++R L D LS+A+ ++ M + ++ +N+
Sbjct: 161 HVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+L++ CK G +D+A +L EM+ G P+ +Y++ ++ + ++ +++ M
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L + +TYN +I C+ EA+ L++EM+ R A P +YN ++ C +V
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K PD ++N +L R G A +++ ++ R P+V TY+ ++HGL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
C G L+ A + + M D+G+ P T +L N LG++ + ++M
Sbjct: 401 C-MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M+ G+ PS+ L+HA ++ + +A +F + P V TY+ ++ GL
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K FDEM E+ + ++ L+ C G +EA + REM +PD+F++S+
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 120 FIHAFCEANDIHSV 133
F+ +H+V
Sbjct: 676 FLKNLHRDYQVHAV 689
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G +P++ + L+ LCK + +A + + K V TY+ L+ GL G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A ++ +M++R D++ +L++ K GN+DEA + +EM +P+ +Y+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C ++ + D M PNV TYN +I CK V+E +L M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D ++YN ++ +C ++ +AL + M V PD T+ ++L L G + A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + Y + Y++M+HGLCK K+E+A + F + EG+ P + T ++
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKAD-KVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI LLH C + A K + P V Y+ L+ GL GE
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +L +EM ++ D++ +N+LL +C +G +A MLR+M PD +++
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M + ++ PN TYN II LC + ++ +A + D M +G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C V+ ++L RM+ E D TYN ++ +VG+ A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE----GIPPYSSTVEM 295
+++ M R P + T+ +++HGLC G++E A F+ M + GI Y+ +
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLC-VNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 296 L 296
L
Sbjct: 431 L 431
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 2/286 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
+GI +Y L+H C+ + A K + P++ T+ L+ G V + +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L M++ +++ +N+L++ +CK G ++ A +L EM G D +Y+ +
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + R+L M + ++ P+V T+ +I K ++EA +L EMI+ +P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN+I+ C + A + M + P+ TYN ++ + D +++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M GF + TY+ ++HG C + GKL A F MV + P
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYC-QVGKLRVALDIFCWMVSRRVTP 384
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
FF+ + P++ ++ L+ ++ +M D+ + L+ C+
Sbjct: 59 FFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCR 118
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EP ++ +H FC N I F ++ M + PNV
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCKN ++ A +LL+EM ++G D +YN +L C + A R++ M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K ++ PD T+ ++ + V+ G D A E+++ M + P+ TY+ +++GLC G+L
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC-MHGRL 297
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A K F++M +G P T L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL A + + F + + + + +++IL+ LS A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SLL C I +A ++ M G EP+ Y+ I C+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ +L+ M++ L +V TYN ++ LC + + +A ++L +M++R NPD +
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + ++ A L M + +V P+ TYN ++ L GR A + ++ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+G +P+V TY+ ++ G CK + ++E K F+ M EG
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFR-MVDEGMKLFQRMSCEG 346
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A LF EM+ + I+ LL A + ++M G D +S++I I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H FC + + VL M + P++ T+ ++ C ++ +A+ L+ M++ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ YN ++ C E+N+AL L+ M K+ + D TYN +L L GR+ A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M KR P V T++ ++ + K+G L+EA + ++ M+ + P + T + N L
Sbjct: 234 LRDMMKRSINPDVVTFTALID-VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P+ + +++ LC + A + FD A P V TY+ L+ G
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KLF M DI +N+L+ C+ G + A + M S PD ++ I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C +I S D M+ + YN +I LCK +KVE+A++L + G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PD +Y ++ C A LI RM +E ++
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
++A + EM P ++ + A +V M+ Y + +++++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I C+ ++ A +L +M++ G P ++ ++L C + A L+ M K
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P+ YN ++ L + G + A E+ MEK+G V TY+ ++ GLC G+ +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC-YSGRWSDAA 231
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
+ M+ I P T L + V G LD + L +M +S+
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 12/220 (5%)
Query: 109 GAEPDAFS------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
GA AFS + F+H+ F + M +P++ + ++
Sbjct: 29 GAAARAFSDYREKLRTGFLHSI----RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANL 84
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E +M G + D +S+ ++ C + ++ AL ++ +M K P T+
Sbjct: 85 RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+L V R A + M K G+ P+V Y+ ++ GLC K G+L A + M
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC-KNGELNIALELLNEME 203
Query: 283 DEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
+G+ T L L G + D +L D M+RS +
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 8/320 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE GI+P++ + +L + CK+ V+ A Q K P TY++LV GL GE
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A++L EML V ++ L+ C+ G +DEA + EM S GA P +Y+
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ + ++LD M NL+P++ +YN +I + + EA+ L E+ RG
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C ++++A+RL M K PD T+ ++++ ++G A
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM---MVDEGIPPYSSTVEML 296
E+++ M RG P Y + G + KL + K F M M+ G PP T +
Sbjct: 421 ELFDEMLNRGLQPDRFAYITRIVG----ELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 297 RNRLVGLGFLDIIEILADKM 316
+ L LG L L KM
Sbjct: 477 IDGLHKLGNLKEASELVKKM 496
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++ S Y D L+ C++ + A + + PT+ TY+ ++ GL G
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR 310
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+ARKL D M+ + D++++N+L+ + GNI EA + E+R G P +Y+
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNT 370
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C D+ R+ D M ++ P+VFT+ ++R CK + A +L DEM+ RG
Sbjct: 371 LIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y + + + A + M PD TYN+ + L ++G A+
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ + M G P TY+ ++H G L +A F M+ +GI P T +L
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHL-MAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ PS+ + L+ LC+ + VA + D KH P V T++ILVRG +G L A
Sbjct: 360 GLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMA 419
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++LFDEML R D A+ + + K G+ +A GM EM + G PD +Y++FI
Sbjct: 420 KELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDG 479
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++ ++ M LVP+ TY II + +A + EM+ +G P
Sbjct: 480 LHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPS 539
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ + R + +A+ M ++ V P+ TYN ++ L +V + D+A + +
Sbjct: 540 VVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFT 599
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
M+ +G P+ TY+++++ C G +EA + ++ M+D I P S T
Sbjct: 600 EMQAKGISPNKYTYTILINENC-NLGHWQEALRLYKDMLDREIQPDSCT 647
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 158/328 (48%), Gaps = 6/328 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV + P + + L++ + ++ A F + P+V TY+ L+ GL +G+
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGD 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +L DEM++ D+ L+ CK GN+ A + EM + G +PD F+Y
Sbjct: 381 LDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYIT 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + D F + + M P++ TYN I L K ++EA +L+ +M+ G
Sbjct: 441 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +I+ H + A + M + + P TY +++ GR A
Sbjct: 501 LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 560
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M ++G +P+V TY+ +++GLCK + K+++A K+F M +GI P T +L N
Sbjct: 561 LHFFEMHEKGVHPNVITYNALINGLCKVR-KMDQAYKFFTEMQAKGISPNKYTYTILINE 619
Query: 300 LVGLG-FLDIIEILADKMERST---SCT 323
LG + + + + D ++R SCT
Sbjct: 620 NCNLGHWQEALRLYKDMLDREIQPDSCT 647
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVG 58
MV G+ P + + +++L L R + VA + ++ + PTV TY+ ++ G
Sbjct: 145 MVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQG 204
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ EA +L +M + C + + +N L+ + +G +++A +++EM +G E A++Y
Sbjct: 205 KVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYD 264
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I +CE + R+ + M VP + TYN I+ LCK +V +A +LLD M+ +
Sbjct: 265 PLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK 324
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD SYN ++ + + A L + ++P TYN ++ L R+G D A
Sbjct: 325 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVA 384
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M K G P V T++++V G C K G L A + F+ M++ G+ P
Sbjct: 385 MRLKDEMIKHGPDPDVFTFTILVRGFC-KLGNLPMAKELFDEMLNRGLQP 433
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P ++HA H++ A F + P+V TY++L+ G
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A F EM E+ +++ +N+L+ +CK +D+A+ EM++ G P+ ++Y+I
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
I+ C R+ M + P+ T++ +++ L K+ K
Sbjct: 616 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK 660
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMI----ERGANPDEWSYNAILAYHCDRAEVNMALR 205
TY I+ L +N + AY ++++++ E G + Y ++ + L
Sbjct: 82 LTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIY-AKKSMLEKCLL 140
Query: 206 LITRMTKENVMPDRHTYNMVLKLLV-RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ +M + ++PD N VL+LL R D A EV+ M + G P+V TY+ M+
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSF 200
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
CK+ GK++EA + M G P T +L N L G L+ + L +M R
Sbjct: 201 CKQ-GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 142/285 (49%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ PS+ + LL C+ ++ A +F + P V TY+IL+ G V L+
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+ FDEML + D A+N+ + A G+ EA + M S G D +Y+IF+
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ ++ + + M L P+ TY C+I C+ ++ EA + D M+ G P
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y + +C R + A +M +E V P+ TYN+++ L R+GR + A + +
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFH 641
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +RG P+ TY++++ G C K+G EEA + + M GI P
Sbjct: 642 EMLERGLSPNKYTYTLLIDGNC-KEGNWEEAIRLYSEMHQHGIHP 685
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+ P + + L++ CK ++K A F + K P+V TY+IL+ G +G+
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR+ EM+E+ C D+ + L+ K N+ EM S G +PD F+Y+
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A F++ + M + + TYN + LCK+ +++AY L +M+ G
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC+R + A + M + P TY + + R G A
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + G P+ TY+V++H LC + G+ A ++F M++ G+ P T +L
Sbjct: 603 GWFQKMLEEGVRPNEVTYNVLIHALC-RMGRTNLAYQHFHEMLERGLSPNKYTYTLL 658
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P + L++ K +++ + +FFD P Y+ + +G
Sbjct: 433 MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGS 492
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA +L + M+ R D + +N L+ +CK+GN+ +A+ + +M S G +PD +Y+
Sbjct: 493 TSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTC 552
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA CE + + D M L P+ TY I C+ + AY +M+E G
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ C N+A + M + + P+++TY +++ + G ++ A
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++ M + G +P T++ + G +G+ + A +Y E +V
Sbjct: 673 RLYSEMHQHGIHPDHCTHNALFKGF--DEGQSKHAIQYMENVV 713
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 2/287 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
K S + + L+ R V+ A ++E PTV TY+ ++ G+ G + AR
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM D++ +NSL+ CKAGN+ EA + +++ G P +Y+I + +C
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ R M P+V TY ++ K + + DEM+ +G PD +
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ + A +L M + D TYN+ L L + G A +W M
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G P TY+ ++H C ++G+L EA F+ M+ G+PP + T
Sbjct: 539 VSDGLQPDCITYTCLIHAHC-ERGRLREARDIFDGMLVSGLPPSAVT 584
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 38/325 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDV 57
M++ GI+PSI + LL + + V A + + P+ TY++++ GL
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281
Query: 58 GELSEARKLFDEM-LERKCPV---------------------------------DILAHN 83
GEL +A +L D M + +K ++ +N
Sbjct: 282 GELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYN 341
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+++ M ++GN++ A EMR++G PD +Y+ I+ +C+A ++ + +KR
Sbjct: 342 TIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
L P+V TYN ++ C+ +EEA + EM+E+G PD +Y ++ + M
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
M + + PD YN + + +G A ++ E M RG TY++ + G
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LC K G L++A + MV +G+ P
Sbjct: 522 LC-KSGNLKDAYVLWMKMVSDGLQP 545
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 4/269 (1%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + A H P +K ++++R L D + R ++ EML+ I+ +N+LL++ +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 92 AGNIDEAHGMLREM--RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
G +D+A +LREM R G P +Y++ I+ ++ +++D M R + +
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASA 302
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
FT+N +I VE+A L EM G P +YN I+ V A
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M ++PD TYN ++ + G A ++ +++ G PSV TY++++ G C + G
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC-RLG 421
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
LEEA ++ + MV++G P ST +L N
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMN 450
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ L M V P N+VL+ L R+D V+ M + G PS+ TY+ +
Sbjct: 178 TLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTL 237
Query: 261 VHGLCKKKGKLEEACKYFEMMVDE--GIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-- 316
+ ++G++++A K M G P T ++ N L G L+ L D+M
Sbjct: 238 LDSFF-REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRM 296
Query: 317 -ERSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+++++ T L + K+ + + E+E++
Sbjct: 297 SKKASAFTFNPLITGYFARGSVEKAGALQLEMENE 331
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 13/328 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MVE G KP ++ QLL+ LCK RK +KV + P +Y+ LV L
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSG---IIPDASSYTFLVSSLCR 144
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G + A +L D+M E P + + +NSL+ +C GN+ ++ +L + G P+A++
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS + A + ++LD + PN+ +YN ++ LCK + E+A +L E+
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELP 264
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P+ SYN +L C+ A L+ M + P TYN+++ L GR +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTE 324
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A EV E M + F P+ S+Y+ ++ LC K GKL+ K + M+ P Y++
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIAHLC-KDGKLDLVVKCLDQMMYRHCNPNEGTYNAI 383
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERST 320
+ +V F II+ L +K ST
Sbjct: 384 ATLCEEGMVQEAF-SIIQSLGNKQHSST 410
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 4/293 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G +P++ + LL LCK + A + F + F+P V +Y+IL+R L + G EA
Sbjct: 232 GGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM + + +N L+ ++ G + A +L EM +P A SY+ I
Sbjct: 292 NVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAH 351
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + V + LD M + PN TYN I LC+ V+EA+ ++ + + +
Sbjct: 352 LCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSST 410
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y ++ C + A +L+ MTK PD TY+ +++ L G + A E++
Sbjct: 411 QEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS 470
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
ME+ P Y+ ++ G CK + + + A FE+MV +G P +T +L
Sbjct: 471 VMEENN-KPDTENYNSLILGCCKSR-RTDLALDVFEIMVGKGYLPNETTYTIL 521
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A + M+E+ D+ LL +CKA + +A ++ M G PDA SY+
Sbjct: 78 LTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTF 137
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C ++ +++D M+ Y N TYN ++R LC + + ++ QLLD +I++G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y+ +L + A +L+ + + P+ +YN++L L + GR + A
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEMLRN 298
++ + +GF P+V +Y++++ LC +G+ EEA EM DE P STV N
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLC-NEGRWEEANVLLAEMNGDERSP---STVTY--N 311
Query: 299 RLVG 302
L+G
Sbjct: 312 ILIG 315
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 131/256 (51%), Gaps = 7/256 (2%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+E K + +A L M G +PD F + ++ C+A + +V++ M +
Sbjct: 69 VEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGI 128
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P+ +Y ++ LC+ V A QL+D+M E G + +YN+++ C + +L+
Sbjct: 129 IPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQ 188
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ R+ ++ ++P+ +TY+ +L+ + D A+++ + + +G P++ +Y+V++ GLC
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLC 248
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM---ERSTSC 322
K+G+ E+A + F + +G P + +L L G + +L +M ERS S
Sbjct: 249 -KEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPST 307
Query: 323 TIQEL---ANAMRGKT 335
+ + A+ G+T
Sbjct: 308 VTYNILIGSLALHGRT 323
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS + L+ +L + A + + + F PT +Y+ ++ L G+L K
Sbjct: 305 PSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKC 364
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D+M+ R C + +N++ +C+ G + EA +++ + + Y I I + C
Sbjct: 365 LDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCR 423
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + F++L M +Y P+ FTY+ +IR LC + EA ++ M E PD +
Sbjct: 424 KGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENNKPDTEN 482
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN+++ C ++AL + M + +P+ TY ++++ ++ D AT+V ++
Sbjct: 483 YNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQ 542
Query: 247 KR 248
R
Sbjct: 543 LR 544
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 102/228 (44%), Gaps = 3/228 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+ KP+ + ++ LCK + + + D + P TY+ + L + G
Sbjct: 333 MIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGM 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + + ++ + ++ ++C+ GN A +L EM G PD+F+YS
Sbjct: 392 VQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ + M+ N P+ YN +I CK+ + + A + + M+ +G
Sbjct: 452 LIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
P+E +Y ++ E+++A +++ + +V+ +V++
Sbjct: 511 YLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLVMQ 558
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 307 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P + TY+++++ C KKG + + K + M G P T +L N
Sbjct: 367 KMLREMLSVGLKPDIGTYTMIINEFC-KKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 424
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++++LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 303 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 342
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ LH+ C H HQ F AK V
Sbjct: 4 PANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQR 63
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 64 SDIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGF 123
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 124 YEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 184 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHDLIDEM 302
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGDLD 328
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ + G+ P++ + ++ LCKR VK A + + K+ + P V T++ L+ GL G
Sbjct: 305 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 364
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A +LF +++ ++ + +++ CK + A + M+ G P+ +Y+
Sbjct: 365 TERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYT 424
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+A + + +++ M PN TYN I+ LCK + EEA++LL+ +
Sbjct: 425 TLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQN 484
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
D +Y +++ C RA++N AL + +M K PD H Y ++ R +
Sbjct: 485 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 544
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++++ + K G P+ TY+ M+ G C++K K+ A K+F+ M D G P S + L +
Sbjct: 545 EKLFDEVIKLGLAPTKETYTSMICGYCREK-KVSLAVKFFQKMSDHGCAPDSISYGALIS 603
Query: 299 RLVGLGFLDIIEILADKM 316
L LD L D M
Sbjct: 604 GLCKESRLDEARQLYDTM 621
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 5/267 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+++++ + + V+ A FD + P TY ++ G G + EA + EM+
Sbjct: 212 MNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM 271
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
ER VD ++ A C+ ++ A ++ +G P+ +YS I C+ +
Sbjct: 272 ERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVK 331
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNA 189
F +L+ M + PNV+T+ +I LCK E A++L ++I R N P+ +Y A
Sbjct: 332 QAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLI-RSDNYKPNVHTYTA 390
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+++ +C +++ A L RM ++ ++P+ +TY ++ + G F +A E+ E M G
Sbjct: 391 MISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEG 450
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACK 276
F+P+ TY+ +V GLC K+G+ EEA K
Sbjct: 451 FFPNTCTYNSIVDGLC-KRGRAEEAFK 476
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 134/261 (51%), Gaps = 14/261 (5%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +FDEM R D + ++ C+ GN+ EA + EM G D + ++ I
Sbjct: 228 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 287
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
AFCE + ++ + + L PN+ Y+ +I LCK V++A++LL+EM++ G P
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+ +++ +++ C + A RL ++ + +N P+ HTY ++ + + RA +
Sbjct: 348 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 407
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLR 297
+E M+++G P+ +TY+ ++ G C K G +A + E+M +EG P Y+S V+ L
Sbjct: 408 FERMKEQGLVPNTNTYTTLIDGHC-KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC 466
Query: 298 NR--------LVGLGFLDIIE 310
R L+ GF + IE
Sbjct: 467 KRGRAEEAFKLLNTGFQNQIE 487
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++ CK + + A F+ K + P TY+ L+ G G S+A +
Sbjct: 382 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 441
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M + +NS+++ +CK G +EA +L E D +Y+I I C
Sbjct: 442 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 501
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D++ L+ M + P++ Y +I C+ ++++ +L DE+I+ G P +
Sbjct: 502 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 561
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +++ +C +V++A++ +M+ PD +Y ++ L + R D A +++++M
Sbjct: 562 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 621
Query: 246 EKRGFYPSVSTYSVMVHGLCK 266
+G P T + + CK
Sbjct: 622 IDKGLSPCEVTRVTLTYEYCK 642
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G + EA M+ +MR+ G + I E + V D M + P+ TY
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
II C+N V EA + + EM+ERG D + I+ C+++ VN A+ ++TK
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ P+ Y+ ++ L + G +A E+ E M K G+ P+V T++ ++HGLC KKG E
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC-KKGWTE 366
Query: 273 EACKYFEMMV 282
A + F ++
Sbjct: 367 RAFRLFLKLI 376
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P+ L+ CK + A++ + +E F P TY+ +V GL G
Sbjct: 411 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 470
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL + + + D + + L+ CK ++++A L +M +G +PD Y+
Sbjct: 471 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 530
Query: 120 FIHAFCEAN---DIHSVF--------------------------------RVLDSMKRYN 144
I AFC N D +F + M +
Sbjct: 531 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 590
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+ +Y +I LCK +++EA QL D MI++G +P E + + +C + A+
Sbjct: 591 CAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAM 650
Query: 205 RLITRMTKENVMPDRHT 221
++ R+ K+ + HT
Sbjct: 651 VILERLNKKLWIRTVHT 667
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G +P I+ L+ A C++ +K + + FD K PT +TY+ ++ G +
Sbjct: 516 MFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKK 575
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A K F +M + C D +++ +L+ +CK +DEA + M G P +
Sbjct: 576 VSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVT 635
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ D S +L+ + + + V T +IRKLC +KV A +++++
Sbjct: 636 LTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKE 692
Query: 180 ANPDEWSYNAI 190
N D + A
Sbjct: 693 VNVDRVTLAAF 703
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 36/170 (21%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++ + K++EA ++ +M +G N I+ + V A + M+
Sbjct: 179 CMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSAR 238
Query: 214 NVMPDRHTYNMVLKLLVRVGR-----------------------------------FDRA 238
V PD TY ++ R G +RA
Sbjct: 239 GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 298
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + K G P++ YS M+ GLC K+G +++A + E MV G P
Sbjct: 299 VWFFHKVTKMGLSPNLINYSSMISGLC-KRGSVKQAFELLEEMVKNGWKP 347
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 158/298 (53%), Gaps = 5/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G++P+++ L+ LL K+ ++ A+ D A +V TY+I++ L ++G+++EA
Sbjct: 392 GLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEAC 451
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+D+M+ + ++++N ++ CK G +D+AH ++ + G +P+A +Y+I +
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGS 511
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D F + D M +VP +T+N II LCK +V EA L+ I++ P
Sbjct: 512 FKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTS 571
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN I+ + ++ A + M + + P+ TY ++ + + D A ++ +
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
M+++G ++ Y+ ++ G CK + +E ACK+F +++ G+ P Y+ + RN
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQ-DMENACKFFSKLLEVGLTPNTIVYNIMISAYRN 688
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 142/299 (47%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV GI P+ Y + +++ LCK V A + K F PT TY+ ++ G G
Sbjct: 527 MVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGA 586
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ EM + +++ + SL+ CK+ +D A M +M+ G E D Y+
Sbjct: 587 IDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYAT 646
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ D+ + + + L PN YN +I +E A L EMI
Sbjct: 647 LIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNK 706
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y +++ +++ AL L + M ++PD YN+++ L G+ + A
Sbjct: 707 IPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAG 766
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ + M+ P+V Y+ ++ G K+G L+EA + + M+D+G+ P +T ++L N
Sbjct: 767 KILKEMDGNNITPTVLLYNTLIAGHF-KEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 6/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G+KP+ L+ K+ + A FD PT T++ ++ GL VG
Sbjct: 492 IIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGR 551
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR + +++ + +N +++ K G ID A + REM P+ +Y+
Sbjct: 552 VSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTS 611
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC++N + ++ D MKR L ++ Y +I CK + +E A + +++E G
Sbjct: 612 LINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVG 671
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN +++ + + + AL L M + D Y ++ L++ G+ A
Sbjct: 672 LTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFAL 731
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M RG P + Y+V+++GLC G+LE A K + M I P TV +L N
Sbjct: 732 DLYSEMLCRGIVPDIFMYNVLINGLC-NHGQLENAGKILKEMDGNNITP---TV-LLYNT 786
Query: 300 LVGLGF 305
L+ F
Sbjct: 787 LIAGHF 792
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 3/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+K ++ A+C+ + +A + + + + P+ TY+ ++ +G EA
Sbjct: 252 GLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEA 311
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L DEM++ + PV++ SL++ C G+++ A + E+ +G P+ +S+ I
Sbjct: 312 LRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEW 371
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++ + MK L P VF N +++ K +E AY LLD +E G
Sbjct: 372 CSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-AS 430
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L + C+ +VN A L +M + + P +YN ++ + G D A EV
Sbjct: 431 VVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMN 490
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+ + G P+ TY++++ G KKG E A F+ MV GI P T + N L +
Sbjct: 491 GIIESGLKPNAITYTILMEG-SFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKV 549
Query: 304 G 304
G
Sbjct: 550 G 550
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 36/331 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P + ++ LL A+ +R V+ AH+ FD A+ T +L+R G+
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGK 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + F + R +D +++ +++A+C+ ++D A ++ +G P +Y+
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + R+ D M + NV +I+ C V A +L DE++E G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMT-------------------KENVMPDRH 220
P+ ++ ++ + V A L TRM K+N++ + +
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY 417
Query: 221 ---------------TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
TYN+VL L +G+ + A +W+ M +G PS+ +Y+ M+ G C
Sbjct: 418 LLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHC 477
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
KKG +++A + +++ G+ P + T +L
Sbjct: 478 -KKGCMDDAHEVMNGIIESGLKPNAITYTIL 507
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 1/214 (0%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N LL + +A I EA R M G P ++ + A N + R+ D M
Sbjct: 156 NYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAE 215
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ + +T ++R K K EA + + RG D SY+ ++ C +++++
Sbjct: 216 RRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDL 275
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A +L+ + +P TY V+ VR+G F A + + M +V+ + ++
Sbjct: 276 ASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIK 335
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G C +G + A + F+ +V+ G+ P + +L
Sbjct: 336 GYC-VRGDVNSALRLFDEVVEVGVTPNVAIFSVL 368
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L+ LC D + +V +++L+ GL G
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR++FDEM+ R +I+ +L+ C GN+D A + + G + D ++Y++
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII----------------------- 156
FIH +C+ + RV D M R +VPN+ TYN +I
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Query: 157 ------------RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
LCK++++++A L ++++E G PD WSY ++ C + A+
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 450
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ M +N++P TY+ ++ L R GR A + M +G P TYS+++ L
Sbjct: 451 NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 510
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
KK+ L+EA F M+ G+ P
Sbjct: 511 WKKQ-HLDEAVFLFNQMIKRGLEP 533
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 152/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G +P+I L+ C + +V +A + FD + F V TY++ + G VG
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++FDEM +I+ +NSL++ +CKAG + A +++ M G PD + I
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCI 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C++ + + + + L P+V++Y +I C + ++ EA LL +M +
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y+ ++ C ++ A RL+ M + +PD TY+++L L + D A
Sbjct: 461 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAV 520
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M KRG P V Y++M+ G CK + +++EA F M + + P T +L N
Sbjct: 521 FLFNQMIKRGLEPDVMCYTIMIDGYCKSE-RIDEAINLFREMHMKNLVPDIVTYTILFNA 579
Query: 300 LVGLG 304
+ G
Sbjct: 580 VFKSG 584
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 47/327 (14%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L+ +L LC V A +F D + F+ +Y IL+ GL + G ++EA L +
Sbjct: 110 LNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIE 169
Query: 72 ERKCPV--------DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ K +++ ++ +++ +C+ G +DE EM G P+ F+Y I
Sbjct: 170 KEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRG 229
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP- 182
C F ++D M R L +V+ + +I LCKN + EA ++ DEM+ RG P
Sbjct: 230 LCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPN 289
Query: 183 ----------------------------------DEWSYNAILAYHCDRAEVNMALRLIT 208
D W+YN + +C V A+R+
Sbjct: 290 IVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFD 349
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M +E V+P+ TYN ++ L + G A E+ ++M + G P + T +++ GLCK K
Sbjct: 350 EMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSK 409
Query: 269 GKLEEACKYFEMMVDEGIPP--YSSTV 293
+L++A F +V+ G+ P +S T+
Sbjct: 410 -RLDQAILLFNQLVESGLTPDVWSYTI 435
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+G +S + +F ++L+R +D +A N++L+ +C G + +A E+ + G + S
Sbjct: 85 LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144
Query: 117 YSIFIHAFCE---ANDIHSVFR------------------------VLDSMKRYNLV--- 146
Y I I+ CE N+ ++ R V+D + R V
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEG 204
Query: 147 -------------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
PN FTY +IR LC K E + L+DEMI RG + + + ++
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDG 264
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + A + M P+ T ++ G D A E+++++ + GF
Sbjct: 265 LCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRD 324
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
V TY+V +HG C K G++ +A + F+ M EG+ P Y+S ++ L
Sbjct: 325 VWTYNVFIHGYC-KVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCL 370
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+VE G+ P ++ L+H C + + A D P + TYS L+ GL G
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A +L +EM + D + ++ LL+A+ K ++DEA + +M G EPD Y+I
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C++ I + M NLVP++ TY L + + + G
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTI----------------LFNAVFKSG 584
Query: 180 ANPDEWSY 187
+N EW +
Sbjct: 585 SNSYEWKF 592
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P I L+ LC+ + A + + + K T+ TYSIL+ L L EA
Sbjct: 463 PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI-TYSILLDALWKKQHLDEAVF 521
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF++M++R D++ + +++ CK+ IDEA + REM PD +Y+I +A
Sbjct: 522 LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVF 581
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
++ ++ ++ ++ N P V Y + LCK+E ++
Sbjct: 582 KSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEHLD 619
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ P++Y L+ L K+ A + FD+ +P TY+IL+ GL G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ARKLF EM D +AHN+LL+ CK G + EA +LR G YS
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A F + +M + N+ P++ Y +I+ L K K+E+A +LL M +G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD + YNA++ C R + L M++ PD T+ +++ + R G A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E++ +EK G PSV+T++ ++ GLC K G+L+EA
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLC-KSGELKEA 462
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+D L A R++ + + + K P + Y+IL++GL G++ +A KL M
Sbjct: 310 IDGLFRA---RRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ D +N++++A+C G ++E + EM + PDA +++I I + C +
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-------------------- 172
+ +++ P+V T+N +I LCK+ +++EA LL
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 173 ---DEMIER----------------GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
D M+E G++PD SYN ++ C +++ AL+L+ + +
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ PD TYN ++ L RVGR + A +++ + K F S + Y ++ C+K+
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKR 599
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML---- 102
+ +L+ +G +A + F M E C D+ +N +L M + +E ML
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR----EEVFFMLAFAV 185
Query: 103 -REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM P+ +++ I + + ++ D M + PN TY +I LC+
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++A +L EM G PD ++NA+L C + A L+ K+ +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ ++ L R R+ +A E++ +M K+ P + Y++++ GL K GK+E+A K M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL-SKAGKIEDALKLLSSM 364
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+GI P + + L G G L+
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLE 390
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 45/345 (13%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ ++C+ V+ A + F K +P+V T++ L+ GL GEL EAR L +M E
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG 472
Query: 75 CPVDI---LAH--NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
P + L+H N + M ++G+I +A+ L G+ PD SY++ I+ FC A D
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I ++L+ ++ L P+ TYN +I L + + EEA++L + +P Y +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA--VYRS 590
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHT---------------------------- 221
++ + C + +V +A L + K+ D T
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 222 ------YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
Y + L L + GRF A V+ + ++ + + ++HGLCK++ +L+ A
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKRE-QLDAAI 709
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLV-GLGFLDIIEILADKMERS 319
+ F +D L + L+ ++I+ L ++MER+
Sbjct: 710 EVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERA 754
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L E++S G D++ + + I A+ + MK ++ P+VFTYN I+R + +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 162 NEK-VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
E A+ + +EM++ +P+ +++ ++ + + A ++ MT + P+R
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY +++ L + G D A +++ M+ G YP ++ ++ G C K G++ EA + +
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC-KLGRMVEAFELLRL 293
Query: 281 MVDE----GIPPYSSTVEML 296
+ G+ YSS ++ L
Sbjct: 294 FEKDGFVLGLRGYSSLIDGL 313
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ + I E N ++ L+ +K + + + + +I K E+A + M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 177 ERGANPDEWSYNAILAYHCDRAEV--NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
E PD ++YN IL R EV +A + M K N P+ +T+ +++ L + GR
Sbjct: 155 EFDCRPDVFTYNVILRVMM-REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A ++++ M RG P+ TY++++ GLC ++G ++A K F M G P S
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLC-QRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 295 MLRNRLVGLG 304
L + LG
Sbjct: 273 ALLDGFCKLG 282
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ +I L ++ + +Q L+E+ G + D + + +++ + A+ RM
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDR-ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + PD TYN++L++++R F A V+ M K P++ T+ +++ GL KKG+
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL-YKKGR 213
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+A K F+ M GI P T +L + L G D L +M+ S
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+F P++Y L+ C+++ V VA + + + + + GE
Sbjct: 580 DFRHSPAVYR--SLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETER 637
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA---HGMLREMRSIGAEPDAFSYSI 119
A + E+ RK + + + L +C++G EA +LRE + + P
Sbjct: 638 ALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVK--- 694
Query: 120 FIHAFCEANDIHSVFRV----LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
IH C+ + + V LD+ + L+P V Y + L EK+E QL + M
Sbjct: 695 LIHGLCKREQLDAAIEVFLYTLDN--NFKLMPRVCNY-LLSSLLESTEKMEIVSQLTNRM 751
Query: 176 IERGANPDEWSYNAILAYHCDRAEV 200
G N D IL YH R +V
Sbjct: 752 ERAGYNVDSMLRFEILKYHRHRKQV 776
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 145/283 (51%), Gaps = 2/283 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+H C+ + V A + F + PTV+TY++++ L +G +EA +F EM E+
Sbjct: 279 NLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK 338
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C ++ + L+ ++C+ N D+A +L M G P +Y+ I +C+ S
Sbjct: 339 HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASA 398
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+L M+ N PN TYN +I C+ + + +A LL +M+ER P+ +YN ++
Sbjct: 399 LEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHG 458
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C ++ A +L++ M + ++PD TY++ + L + G + A ++ES++++G +
Sbjct: 459 QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKAN 518
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
YS ++ G C K GK+ + + M+ G P S T L
Sbjct: 519 EVIYSTLIDGYC-KVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 163/339 (48%), Gaps = 10/339 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ PS+ + L+ CK+ A + + +P +TY+ L+ G
Sbjct: 370 MLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L +MLERK +++ +N L+ CK G++ A+ +L M G PD ++YS+
Sbjct: 430 IHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C+ + + +S+K + N Y+ +I CK KV + LLD+M+ G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN+++ +C A L+ M K ++ P TY +++ L++ FD+A
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++ M G +P V Y+ +H C G+L++A M +GI P + + +
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYC-SHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668
Query: 300 LVGLGFLD--------IIEILADKMERSTSCTIQELANA 330
G +D + E+ + + SC I+ L+NA
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNA 707
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 2/315 (0%)
Query: 8 PSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ ++ ALC+ + + + F + + P V TY++L+ L + +A+K+
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ MLE+ ++ +N+L++ CK G A +L M S P+A +Y+ I FC
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+IH +L M L PNV TYN +I CK + AY+LL M E G PDEW+
Sbjct: 427 GKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWT 486
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ + C R V A L + ++ + + Y+ ++ +VG+ + + M
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
G P+ TY+ ++ G CK+K +EA ++M+ I P + T +L + L+
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEK-NFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEF 605
Query: 307 DIIEILADKMERSTS 321
D + D+M + S
Sbjct: 606 DQAHDMFDQMLSTGS 620
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 164/346 (47%), Gaps = 6/346 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
+V+ G+ + L+ C+ K+V A+ F + ++ + +Y+ L+ G +
Sbjct: 230 IVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARR 289
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF +M E C + + ++ A+C+ G EA M +EM +P+ +Y++
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + CE ++ ++L+ M L+P+V TYN +I CK A ++L M
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN ++ C ++ A+ L+ +M + + P+ TYN+++ + G A
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M + G P TYSV + LC K+G +EEA FE + ++GI L +
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLC-KRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANAMRGKTGFRKSR 341
+G + L DKM + S T L + + F+++R
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P+I+ L+ +++ CK +V A + + + TY+ L+ G
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +F M + C + +++ +L+ C+A +DEA + +M P +Y++
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTV 314
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + M + PNV TY +I LC++ ++A ++L+ M+E+G
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG 374
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YNA++ +C + AL +++ M N P+ TYN ++ R +A
Sbjct: 375 LIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAM 434
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M +R P+V TY++++HG C K+G L A K +M + G+ P T + +
Sbjct: 435 SLLHKMLERKLQPNVVTYNILIHGQC-KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493
Query: 300 LVGLGFLD 307
L G ++
Sbjct: 494 LCKRGLVE 501
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
+F T++ Y++L+ L + E + ++ EML+ +I N+++ CK GN+ EA
Sbjct: 164 KFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA 223
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ ++ G D F+Y+ I +C ++ + + SM + N +Y +I
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
C+ +V+EA +L +M E P +Y I+ C AL + MT+++ P+
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
HTY +++ L FD A ++ M ++G PSV TY+ ++ G C KKG A +
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYC-KKGLSASALEIL 402
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+M P + T N L+ LGF
Sbjct: 403 SLMESNNCSPNARTY----NELI-LGF 424
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 146/372 (39%), Gaps = 66/372 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P+ + L+ CK K+ K A D K + P TY+IL+ L E
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMC----------------------------- 90
+A +FD+ML D+ + + + A C
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTL 664
Query: 91 ------KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA----------------- 127
+ G+ID A G+L+ M +G EP ++YS I A
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSG 724
Query: 128 ---NDIHSVFRVLD---------SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
ND + +R +D M + PN TY I LCK +E A++L D M
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
E+G +P+E YN++L C A+R + M + +P + ++L L G
Sbjct: 785 KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGND 844
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
++A V+ S + + + V++ GL KKG ++ F +M +G + T M
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLIDGLL-KKGLSDKCSDLFGIMETQGCQIHPKTYSM 903
Query: 296 LRNRLVGLGFLD 307
L G+ +D
Sbjct: 904 LIEGFDGIQEID 915
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL-------VPNVFTYN 153
+L +RS+ DAF + + + + + S F ++D MK L PN+FT N
Sbjct: 149 VLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLN 208
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
++ CK V EA + ++++ G + D ++Y +++ +C V+ A + M +
Sbjct: 209 TMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNK 268
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ + +Y ++ R D A +++ M + +P+V TY+V++ LC + G+ E
Sbjct: 269 GCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALC-QLGRKTE 327
Query: 274 ACKYFEMMVDEGIPPYSSTVEML 296
A F+ M ++ P T +L
Sbjct: 328 ALNMFKEMTEKHCQPNVHTYTVL 350
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 6/286 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK----HEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L+ LC+ + + A++ F + + P V TY+ L+ G G L +A K+ M
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
RKC +++ ++SLL +CKAG++D+A + R M S G P+ +Y+ IH C A+ +
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 276
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ ++D M + +YN ++ C+ ++EEA QL EM + PD +Y ++
Sbjct: 277 AARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336
Query: 192 AYHCDRAEVNMALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
C+ + + A L+ M T + PD TY++V+ R RF A E + M R
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P+ TYS ++ GLC K G++ A + + + + Y+ +E L
Sbjct: 397 APNAVTYSSLIDGLC-KAGRVNHAMEVLKNVDKPDVVTYTIVIEGL 441
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 7/271 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK--HEFTPTVKTYSILVRGLGDVG 58
M EF + P+ + +++ LCK + A++ + P + TYS ++ G G
Sbjct: 1 MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59
Query: 59 ELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
E+ A ++ EM+ R D++ + S+++ +C+ G +D A M+REM+ G EPD F++
Sbjct: 60 EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD--EM 175
S I +C A + ++ + + + + + +I LC+ ++ EAY+L EM
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179
Query: 176 IERGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
E GA PD +Y A++ C + A++++ M +P+ TY+ +L L + G
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
D+A +++ M +G P+V TY+ ++HGLC
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLC 270
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 48/312 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M G P++ L+H LC V A D P +Y+ L+ G +G
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
+ EA++LF EM + C D + + L+ C A ++EA +L M++ G +PD +YS
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369
Query: 119 I-----------------------------------FIHAFCEANDIHSVFRVLDSMKRY 143
I I C+A ++ VL ++ +
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
P+V TY +I LC ++ EEA LL+EM+ + P ++N+++ C +++ A
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS-------T 256
+L+ M + P TY +L+ R GR + A E++E M ++ S +
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA 545
Query: 257 YSVMVHGLCKKK 268
+S ++ GLCK +
Sbjct: 546 FSALIRGLCKAR 557
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ + P+ L+ LCK V A + N P V TY+I++ GL
Sbjct: 391 MIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK---PDVVTYTIVIEGLCGTDRT 447
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA L +EM+ ++ + NS++ A+C+ G++DEA +L M + G EP +Y+
Sbjct: 448 EEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 507
Query: 121 IHAFCEANDIHSVFRVLDSMKR--------YNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ F + + + + M+R NLVP ++ +IR LCK ++++A ++
Sbjct: 508 LEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVV 566
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
+E+ R P E AI+ A +LI ++K
Sbjct: 567 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 606
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV ++PS+ + ++ ALC+ + A + A H P + TY+ L+ G G
Sbjct: 457 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516
Query: 60 LSEARKLFDEMLERKCPVDILAHN--------SLLEAMCKAGNIDEAHGMLREMRSIGAE 111
+ A +LF E++ RK A N +L+ +CKA ID+A ++ E+RS E
Sbjct: 517 MEIAYELF-EVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 575
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
P + A ++++S+ + L
Sbjct: 576 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 153/325 (47%), Gaps = 38/325 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G KP++ + L+ LCK+ +K A + + ++ + P V T++ L+ GL G
Sbjct: 301 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 360
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A +LF +++ ++ + S++ CK ++ A + M+ G P+ +Y+
Sbjct: 361 TEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 420
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+A + + +++ M PN++TYN +I LCK + EAY+LL++
Sbjct: 421 TLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSC 480
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------------------------- 213
G D +Y ++ C ++++ AL RM K
Sbjct: 481 GLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 540
Query: 214 ----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++P + TY ++ + G FD A + + +M++ G P TY ++ G
Sbjct: 541 ERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISG 600
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LC KK ++EACK +E M+D G+ P
Sbjct: 601 LC-KKSMVDEACKLYEAMIDRGLSP 624
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++ CK + A F K + P V TY+ L+ G G A +
Sbjct: 378 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYE 437
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M + +I +N++++++CK EA+ +L + S G E D +Y+I I C
Sbjct: 438 LMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 497
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ +DI M + ++ N +I C+ +K++E+ +L ++ G P +
Sbjct: 498 KQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKE 557
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++++ +C + ++AL+ M + +PD TY ++ L + D A +++E+M
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617
Query: 246 EKRGFYPSVSTYSVMVHGLCKK 267
RG P T + + CK+
Sbjct: 618 IDRGLSPPEVTRVTLAYEYCKR 639
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 131/268 (48%), Gaps = 6/268 (2%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG 93
D +P+ T + ++ + G + A +FDEM R D + ++ + G
Sbjct: 195 DMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDG 254
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
I EA L M G PD + ++ + A CE ++ M PN+ +
Sbjct: 255 KIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFT 314
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LCK +++A+++L+EM+ G P+ +++ A++ C R A RL ++ +
Sbjct: 315 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 374
Query: 214 NVM-PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++ P+ HTY ++ + + +RA ++ M+++G +P+V+TY+ +++G C K G +
Sbjct: 375 DIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC-KAGNFD 433
Query: 273 EACKYFEMMVDEGIPP----YSSTVEML 296
A + +M DEG P Y++ ++ L
Sbjct: 434 RAYELMNLMDDEGFRPNIYTYNAVIDSL 461
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGEL 60
G +P+IY + ++ +LCK+ A++ + A F+ ++ TY+IL++ ++
Sbjct: 446 GFRPNIYTYNAVIDSLCKKSRAPEAYELLNKA---FSCGLEADGVTYTILIQEQCKQSDI 502
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A F M + D+ +N L+ A C+ + E+ + + + S+G P +Y+
Sbjct: 503 KQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSM 562
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +C+ D + +MKR+ VP+ FTY +I LCK V+EA +L + MI+RG
Sbjct: 563 ISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 622
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+P E + + +C R + A+ ++ + K+
Sbjct: 623 SPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKK 655
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+L + G ++EA GM+ +M++ G P + + + + E+ I V D M
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+ ++ ++ ++ K++EA + L MI+RG PD + IL+ C+ VN A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+M P+ + ++ L + G +A E+ E M + G+ P+V T++ ++ GL
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355
Query: 265 CKKKGKLEEACKYFEMMVDEGI 286
C K+G E+A + F +V I
Sbjct: 356 C-KRGWTEKAFRLFLKLVRSDI 376
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 16 LLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ A C++K +K + + F PT +TY+ ++ G G+ A K F M
Sbjct: 527 LIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHG 586
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D + SL+ +CK +DEA + M G P + + +C+ ND S
Sbjct: 587 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAM 646
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL+ + + + V T ++RKLC +KV A +++E+ ++ D + A
Sbjct: 647 IVLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 703
Query: 195 CDRAEVNMALRLITRMTK 212
+ + N+ L R+++
Sbjct: 704 SESGKNNLVADLTERISR 721
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++R + ++ EA ++ +M +G +P + N +L + ++ A + M+
Sbjct: 175 CMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V PD ++ +++ R G+ A M +RGF P +T ++++ LC + G +
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALC-ENGLVNR 293
Query: 274 ACKYFEMMVDEGIPP 288
A YF M+D G P
Sbjct: 294 AIWYFRKMIDLGFKP 308
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 153/305 (50%), Gaps = 11/305 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG+ ++ LL LCK + VK A F + P +++ LV G +
Sbjct: 221 MDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARMM 280
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EAR + EM E ++ + SL+EA C + + +L EMRS G P+ +Y+I
Sbjct: 281 NEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIV 340
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A + D ++ P+ YN +I L + ++E+A ++D+M G
Sbjct: 341 MHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGV 400
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL-----LVRVGRF 235
P ++N +++ CD ++ AL+++ +M +++ PD TY +LKL ++V RF
Sbjct: 401 RPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRF 460
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ M ++ P STY+++V LC + GK ++C + E MV +G P T ++
Sbjct: 461 -----LICHMFRKDITPDFSTYTLLVTWLC-RNGKPAQSCLFLEEMVLKGFAPKKETFDL 514
Query: 296 LRNRL 300
+ +L
Sbjct: 515 VAEKL 519
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P + L+H CK + + A + +H F P+V TY+ L+ +
Sbjct: 260 VPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVY 319
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +EM + CP +++ + ++ A+ KAG EA + ++R G PDA Y+ I+
Sbjct: 320 AILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYIL 379
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
A + V+D M+ + P V T+N +I C + + E A ++L +M E+ PD
Sbjct: 380 GRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDI 439
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +L C R + + LI M ++++ PD TY +++ L R G+ ++ E
Sbjct: 440 KTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEE 499
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
M +GF P T+ ++ L K L A K +++
Sbjct: 500 MVLKGFAPKKETFDLVAEKL--DKANLHSAKKKIQLLT 535
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ T + ++R L ++A F++M + D A N LL+ +CK ++ A G
Sbjct: 194 SLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAF 253
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+E+R PD S++ +H +C+A ++ ++ M+ + P+V TY +I C
Sbjct: 254 QELRG-SVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCME 312
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + Y +L+EM +G P+ +Y ++ AL + ++ + PD Y
Sbjct: 313 KDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFY 372
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +L R GR + A V + M G P+V+T++ ++ C + E A K M
Sbjct: 373 NSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAAC-DHSQAENALKMLVKME 431
Query: 283 DEGIPP 288
++ P
Sbjct: 432 EQSCKP 437
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 156/319 (48%), Gaps = 5/319 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M ++G K D +++L L K ++V A + FD K + F P +K+Y+IL+ G G
Sbjct: 190 MEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 249
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +++ EM + D++A+ ++ A CKA DEA EM +P +
Sbjct: 250 LLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCS 309
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ ++ + K TYN ++ C ++++E+A++ +DEM +G
Sbjct: 310 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKG 369
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ IL + A + +M+ E P TY +++++ R D A
Sbjct: 370 IGPNARTYDIILHHLIRMQRTKEAYEVYQKMSCE---PTVSTYEIMVRMFCNKERLDMAI 426
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++W+ M+ +G P + +S ++ LC + KL+EAC+YF M+D GI P L+
Sbjct: 427 KIWDEMKGKGVLPGMHMFSSLITALCHE-NKLDEACEYFNEMLDVGIRPPGHLFSRLKQT 485
Query: 300 LVGLGFLDIIEILADKMER 318
L+ G D + LA KM+R
Sbjct: 486 LLDEGRKDKVADLAVKMDR 504
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 152/305 (49%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I L++ LC K KV FF+ P + ++ ++ L G
Sbjct: 91 MINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 150
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E ++L D + D++++N+L++ C AG IDEA +L M S+G +P++FSY+
Sbjct: 151 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNT 210
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C+A I S + + M + P V TYN I+ L + ++ EA +L MI G
Sbjct: 211 LLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 270
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
++YN IL C V+ A ++ + + + + T+ +++ L++ GR + A
Sbjct: 271 TKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 330
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ ++ G P V TY V+ L ++G LEE F M G P S + L R
Sbjct: 331 DLFAAIPANGLVPDVVTYRVVAENLI-EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 389
Query: 300 LVGLG 304
L+ G
Sbjct: 390 LLHRG 394
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P L+ ALCK V A F+ +E TP + +S LV GL + +
Sbjct: 56 MRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDK 115
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +LF EML +I+ N++L +CK G + E ++ + +G PD SY+
Sbjct: 116 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 175
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C A I ++L+ M L PN F+YN ++ CK +++ AY L +M+ G
Sbjct: 176 LIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNG 235
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN IL + A L M +TYN +L L + D A
Sbjct: 236 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAF 295
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S+ +G ++ T+++M+ L K G+ E+A F + G+ P T ++
Sbjct: 296 KMFQSLCSKGLQLNIITFTIMIGALLKG-GRKEDAMDLFAAIPANGLVPDVVTYRVVAEN 354
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L+ G L+ + L ME++ + ++ NA+
Sbjct: 355 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 386
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV GI P+ + + A K + A F+ + H +P +Y L+ L +G
Sbjct: 21 MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGR 80
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ +I+ +SL+ +C ++ + EM ++G P+ ++
Sbjct: 81 VDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNT 140
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + R++DS++ + P+V +YN +I C ++EA +LL+ M+ G
Sbjct: 141 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +SYN +L +C ++ A L +M + P TYN +L L + RF A
Sbjct: 201 LKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 260
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E++ +M G + TY+ +++GLCK ++EA K F+ + +G+
Sbjct: 261 ELYLNMINSGTKWGIYTYNTILNGLCKSN-CVDEAFKMFQSLCSKGL 306
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
++ G G+ G LSE L + M+ + N A K G ID+A + +MR G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PDA SY I A C+ + + M + PN+ ++ ++ LC +K E+
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L EM+ G +P+ +N IL C V RL+ + V PD +YN ++
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G D A+++ E M G P+ +Y+ ++HG C K G+++ A F M+ GI P
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYC-KAGRIDSAYSLFRKMLSNGITP 238
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + + LLH CK + A+ F + TP V TY+ ++ GL
Sbjct: 196 MVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKR 255
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ I +N++L +CK+ +DEA M + + S G + + +++I
Sbjct: 256 FSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 315
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ LVP+V TY + L + +EE L M + G
Sbjct: 316 MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNG 375
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
P+ NA++ R +++ A ++++ + N + T +M++ +
Sbjct: 376 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 425
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 36/297 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + +L LCK V + D+ + P V +Y+ L+ G G
Sbjct: 126 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 185
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL + M+ + ++N+LL CKAG ID A+ + R+M S G P +Y+
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNT 245
Query: 120 FIHAF-----------------------------------CEANDIHSVFRVLDSMKRYN 144
+H C++N + F++ S+
Sbjct: 246 ILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKG 305
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L N+ T+ +I L K + E+A L + G PD +Y + + +
Sbjct: 306 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFD 365
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L + M K P+ N +++ L+ G RA +++R F ST S+++
Sbjct: 366 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 422
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 158/320 (49%), Gaps = 4/320 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ H+ A + P TY+ L+R L D G +++A
Sbjct: 106 GSPVDVFAYNTLVAGYCRYGHLDAARRLI--GSMPVAPDAYTYTPLIRVLCDRGRVADAL 163
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML R C +++ + LLEAMC+ ++A +L EMR+ G P+ +Y++ I+
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ + Y P+ +Y +++ LC +++ ++ +L EM+E+ P+E
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 283
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A++++ +MT+ + N+V+ + + GR D A ++
Sbjct: 284 VTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLND 343
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P +Y+ ++ GLC+ + + ++A + MV PP T L G
Sbjct: 344 MGSYGCNPDTISYTTVLKGLCRAE-RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKG 402
Query: 305 FLDIIEILADKMERSTSCTI 324
++ +L ++M CT+
Sbjct: 403 LIEQAIMLIEQMSEH-GCTV 421
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 5/286 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+G +P LL LC K + F + + P T+ +L+R G +
Sbjct: 242 YGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 301
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++ ++M E C + N ++ ++CK G +D+A +L +M S G PD SY+ +
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C A +L+ M R N PN T+N I LC+ +E+A L+++M E G
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+YNA++ C + ++ AL L M + P+ TY +L L R D A E+
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELV 478
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + P+V T++V+V C+K G LEEA + E M++ G P
Sbjct: 479 AEMLRGDCPPNVVTFNVLVSFFCQK-GFLEEAIELVEQMMEHGCTP 523
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +P++ LL A+C+ + A D + + TP + TY++++ G+ G
Sbjct: 169 MLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR+L + + D +++ +LL+ +C + D+ + EM P+ ++ +
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + +VL+ M + N N +I +CK +V++A++LL++M G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD SY +L C + A L+ M + N P+ T+N + +L + G ++A
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ E M + G V TY+ +V+G C +G ++ A + F M
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFC-VQGHIDSALELFRSM 449
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V + L+R L G S+A ++ PVD+ A+N+L+ C+ G++D A
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR-- 131
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
R + S+ PDA++Y+ I C+ + +LD M R PNV TY ++ +C+
Sbjct: 132 -RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N E+A +LDEM +G P+ +YN I+ C V+ A L+ R+ PD +
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y +LK L R+D E++ M ++ P+ T+ +++ C + G +E A + E M
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFC-RGGMVERAIQVLEQM 309
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ G ++ ++ N + G +D
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVD 335
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 5/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+ + + LC++ ++ A + ++H T V TY+ LV G G
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF M C + + + +LL +C A +D A ++ EM P+ ++++
Sbjct: 439 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + +++ M + PN+ TYN ++ + K+ E+A +LL ++ +G
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++++I+ + A++L + + P YN +L L + D A
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAI 615
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + M G P+ STY +++ GL +G L+EA ++ G+
Sbjct: 616 DFFAYMVSNGCMPNESTYIILIEGL-AHEGLLKEAQDLLSVLCSRGV 661
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD + + I C RVL + + +VF YN ++ C+ ++ A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L+ M PD ++Y ++ CDR V AL L+ M + P+ TY ++L+
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ R F++A V + M +G P++ TY+V+++G+C ++G++++A + + G P
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMC-REGRVDDARELLNRLPSYGFQP 246
Query: 289 YS-STVEMLRNRLVGLGFLDIIEILADKMERS 319
+ S +L+ + D+ E+ A+ ME++
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 8/338 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G KP ++ LL LC K + A H D+ K V Y+ ++ GL
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH-KGRCPLDVVAYTTVINGLLR 219
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+L +A LFD ML+R D++ ++S++ A+ K +D+A + M G PD
Sbjct: 220 EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM 279
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + + M R+ + P+V TY ++ LCKN K EA ++ D ++
Sbjct: 280 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 339
Query: 177 ERGANPDEWSYNAIL-AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+RG PD +Y +L Y + A V M L+ M K+ + H +NM++ + +
Sbjct: 340 KRGHKPDSTTYGTLLHGYATEGALVEMH-DLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 398
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A V+ +M ++G P + Y ++ LC G++++A F + EG+ P
Sbjct: 399 DEALLVFSNMRQQGLNPDIVNYGTVLDILC-TAGRVDDALSQFNSLKSEGLAPNIVVFTT 457
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
L + L D +E LA +M C NA+ G
Sbjct: 458 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 495
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 135/305 (44%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P + L+ LCK A + FD+ K P TY L+ G G
Sbjct: 303 MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGA 362
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E L D M+++ + N ++ A K +DEA + MR G PD +Y
Sbjct: 363 LVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGT 422
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + +S+K L PN+ + +I LC +K ++ +L EMI+RG
Sbjct: 423 VLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRG 482
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +NAI+ C + V A L M + + P+ +TYN ++ G+ D A
Sbjct: 483 ICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAM 542
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M G PS TY+ +++G + G++E+ M +G+ P T EML
Sbjct: 543 KLLGVMVFNGVKPSDVTYNTIINGY-SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQG 601
Query: 300 LVGLG 304
L G
Sbjct: 602 LFQAG 606
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGD 56
+++ G + SI+DL++ L + R VA F+ P + TY I++
Sbjct: 53 LLKRGDRASIFDLNRALSDVA-RASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRR 111
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAF 115
+G L A ++ + + + LL+ +C +A + LR M +G +PD F
Sbjct: 112 LGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLF 171
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRY-NLVP-NVFTYNCIIRKLCKNEKVEEAYQLLD 173
SY+I + C+ +L M + P +V Y +I L + ++++AY L D
Sbjct: 172 SYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFD 231
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M++RG +PD +Y++I++ ++ A ++ TRM K VMPD Y ++ G
Sbjct: 232 AMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSG 291
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ A +++ M + G P V TY+ ++ LC K GK EA K F+ +V G P S+T
Sbjct: 292 KPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC-KNGKSTEARKIFDSLVKRGHKPDSTTY 350
Query: 294 EML 296
L
Sbjct: 351 GTL 353
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 137/297 (46%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P + ++ AL K + + A Q F K+ P Y+ LV G G+
Sbjct: 233 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGK 292
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F +M D++ + +L++ +CK G EA + + G +PD+ +Y
Sbjct: 293 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 352
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + +LD M + + +N I+ K+ KV+EA + M ++G
Sbjct: 353 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y +L C V+ AL + E + P+ + ++ L ++D+
Sbjct: 413 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 472
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ M RG ++ ++ LC KKG++ EA F++MV GI P ++T L
Sbjct: 473 ELAFEMIDRGICLDTIFFNAIMGNLC-KKGRVIEAKNLFDLMVRIGIEPNTNTYNTL 528
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 1/267 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
FF + P++ +S L+ + + + L+++M P ++ N LL C+
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A L +M +G EPD ++ ++ FC + I+ + D M PNV
Sbjct: 129 CSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVI 188
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN II LCK+++V+ A LL+ M G PD +YN++++ C+ + A R+++ MT
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + PD T+N ++ V+ GR A E++E M +R P + TYS++++GLC +L
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS-RL 307
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRN 298
+EA + F MV +G P T +L N
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILIN 334
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P + L+ LC A + K E P V T++ L+ G +SEA
Sbjct: 216 GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEA 275
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L++EM+ R DI+ ++ L+ +C +DEA M M S G PD +YSI I+
Sbjct: 276 EELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILING 335
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + ++ M + +V N TY +I+ C+ K+ A ++ M+ G P+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPN 395
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L CD ++ AL ++ M K + D TYN++++ + + G A +++
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYC 455
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
S+ +G P + TY+ M+ GL KKG EA F M ++GI P
Sbjct: 456 SLNLKGLTPDIWTYTAMMLGL-YKKGLRGEADALFRKMKEDGILP 499
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 164/335 (48%), Gaps = 3/335 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI ++ + LL+ C+ + +A F K P + T+ L+ G
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +FD M+E +++ +N++++ +CK+ +D A +L M G PDA +Y+
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + R++ M + + P+VFT+N +I K ++ EA +L +EMI R
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y+ ++ C + ++ A ++ M + PD TY++++ + + +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +RG + TY+V++ G C+ GKL A + F+ MV G+PP T +L +
Sbjct: 347 KLFCEMSQRGVVRNTVTYTVLIQGYCRA-GKLNVAEEIFKWMVFCGVPPNIITYNVLLHG 405
Query: 300 LVGLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
L G ++ + ILAD + I +RG
Sbjct: 406 LCDNGKIEKALVILADMQKSGMDADIVTYNIIIRG 440
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P ++ + L+ A K + A + ++ + P + TYS+L+ GL L EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F M+ + C D++ ++ L+ CK+ ++ + EM G + +Y++ I +
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A ++ + M + PN+ TYN ++ LC N K+E+A +L +M + G + D
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN I+ C EV A L + + + PD TY ++ L + G A ++
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRK 491
Query: 245 MEKRGFYPS 253
M++ G P+
Sbjct: 492 MKEDGILPN 500
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L ++ LF M++ + I + LL A+ K D + +M+ +G + + +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I ++ FC + + L M + P++ T+ ++ C+ +++ +A + D M+E
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ YN I+ C +V+ AL L+ RM + + PD TYN ++ L GR+D A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
T + M KR YP V T++ ++ C K+G++ EA + +E M+ + P T +L
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDA-CVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P + L++ CK K V+ + F + ++ TY++L++G G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A ++F M+ P +I+ +N LL +C G I++A +L +M+ G + D +Y+I
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A ++ + + S+ L P+++TY ++ L K EA L +M E G
Sbjct: 437 IIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDG 496
Query: 180 ANPDE 184
P+E
Sbjct: 497 ILPNE 501
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 8/338 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G KP ++ LL LC K + A H D+ K V Y+ ++ GL
Sbjct: 162 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH-KGRCPLDVVAYTTVINGLLR 220
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+L +A LFD ML+R D++ ++S++ A+ K +D+A + M G PD
Sbjct: 221 EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM 280
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + + M R+ + P+V TY ++ LCKN K EA ++ D ++
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340
Query: 177 ERGANPDEWSYNAIL-AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+RG PD +Y +L Y + A V M L+ M K+ + H +NM++ + +
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMH-DLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 399
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A V+ +M ++G P + Y ++ LC G++++A F + EG+ P
Sbjct: 400 DEALLVFSNMRQQGLNPDIVNYGTVLDILC-TAGRVDDALSQFNSLKSEGLAPNIVVFTT 458
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
L + L D +E LA +M C NA+ G
Sbjct: 459 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 496
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 135/305 (44%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P + L+ LCK A + FD+ K P TY L+ G G
Sbjct: 304 MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGA 363
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E L D M+++ + N ++ A K +DEA + MR G PD +Y
Sbjct: 364 LVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGT 423
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + +S+K L PN+ + +I LC +K ++ +L EMI+RG
Sbjct: 424 VLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRG 483
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +NAI+ C + V A L M + + P+ +TYN ++ G+ D A
Sbjct: 484 ICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAM 543
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M G PS TY+ +++G + G++E+ M +G+ P T EML
Sbjct: 544 KLLGVMVFNGVKPSDVTYNTIINGY-SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQG 602
Query: 300 LVGLG 304
L G
Sbjct: 603 LFQAG 607
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 137/297 (46%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P + ++ AL K + + A Q F K+ P Y+ LV G G+
Sbjct: 234 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGK 293
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +F +M D++ + +L++ +CK G EA + + G +PD+ +Y
Sbjct: 294 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 353
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + +LD M + + +N I+ K+ KV+EA + M ++G
Sbjct: 354 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 413
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD +Y +L C V+ AL + E + P+ + ++ L ++D+
Sbjct: 414 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 473
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ M RG ++ ++ LC KKG++ EA F++MV GI P ++T L
Sbjct: 474 ELAFEMIDRGICLDTIFFNAIMGNLC-KKGRVIEAKNLFDLMVRIGIEPNTNTYNTL 529
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 16/307 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN----AKHEFTPTVKTYSILV---RG 53
+++ G + SI+DL++ L + R VA F+ P + TY I++ R
Sbjct: 53 LLKRGDRASIFDLNRALSDVA-RASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRR 111
Query: 54 LG--DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE 111
LG D+ + R + + P+ + L A +A +D +LR M +G +
Sbjct: 112 LGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDI---VLRRMPELGCK 168
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY-NLVP-NVFTYNCIIRKLCKNEKVEEAY 169
PD FSY+I + C+ +L M + P +V Y +I L + ++++AY
Sbjct: 169 PDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAY 228
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L D M++RG +PD +Y++I++ ++ A ++ TRM K VMPD Y ++
Sbjct: 229 SLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGY 288
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
G+ A +++ M + G P V TY+ ++ LC K GK EA K F+ +V G P
Sbjct: 289 CSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC-KNGKSTEARKIFDSLVKRGHKPD 347
Query: 290 SSTVEML 296
S+T L
Sbjct: 348 STTYGTL 354
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 147/290 (50%), Gaps = 4/290 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++G + + LL +LC+ KHV+ A F K EF K+++I++ G G L +
Sbjct: 209 DYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRD 268
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++++++++ K D+ + + A+ K G I A + ++M G PD + I
Sbjct: 269 AQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIID 328
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C I + M +V TYN +I+ +CK +++E+ Y+LLD+M +G P
Sbjct: 329 QLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPP 388
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y+ IL +V + L+ RM + D YN++L L ++ ++W
Sbjct: 389 NNRTYSYILKTTEKPKDV---IALMQRMERTGCKLDSDIYNLILNLYIKWKYEKGMQQIW 445
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ ME+RG P ++++MVHGL +GKL+EA +Y+ M G+ P T
Sbjct: 446 DEMERRGSGPDQRSFTIMVHGL-HSQGKLDEALQYYTTMKSRGMIPEPRT 494
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 33/222 (14%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
++ ++ ++AL K + A + F + P V + ++ L ++ EA
Sbjct: 281 VERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEAL 340
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F EM +R C D+ +N+L++ MCK +++ + +L +M + G P+ +YS +
Sbjct: 341 EIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILKTT 400
Query: 125 CEANDIHSVFR--------------------------------VLDSMKRYNLVPNVFTY 152
+ D+ ++ + + D M+R P+ ++
Sbjct: 401 EKPKDVIALMQRMERTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSF 460
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ L K++EA Q M RG P+ + + A H
Sbjct: 461 TIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRTKILVKAMH 502
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 152/319 (47%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M I ++Y + +++ LCK +K A +F + F P V +Y+ ++ G G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR++ D M + D + SL+ MCK G ++EA G+ +M IG P+A +Y+
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C D+ F D M + ++P+V TYN ++ L ++ EA ++ EM ++G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ + A L M + + P TY ++ +L R R A
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E + +G P V ++ MV G C G +E A + M + +PP T L
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDGHC-ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516
Query: 300 LVGLGFLDIIEILADKMER 318
G ++ +L D+M+R
Sbjct: 517 RCREGKVEEARMLLDEMKR 535
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 147/285 (51%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P Y L+ +CK ++ A FD + P TY+ L+ G + G+L A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
DEM+++ + +N L+ A+ G + EA M++EMR G PDA +Y+I I+
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F + + M + P TY +I L + +++EA L ++++++G +PD
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+NA++ HC V A L+ M +++V PD T+N +++ R G+ + A + +
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 531
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M++RG P +Y+ ++ G ++G +++A + + M+ G P
Sbjct: 532 EMKRRGIKPDHISYNTLISGY-GRRGDIKDAFRVRDEMLSIGFNP 575
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 7/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P+ + L+ C + ++ A + D K P+V TY++LV L G
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + EM ++ D + +N L+ + GN +A + EM S G EP +Y+
Sbjct: 383 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 442
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ N + + + + + P+V +N ++ C N VE A+ LL EM +
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 502
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE ++N ++ C +V A L+ M + + PD +YN ++ R G A
Sbjct: 503 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF 562
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK-KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V + M GF P++ TY+ ++ LCK ++G L E + + MV++GI P ST L
Sbjct: 563 RVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE--ELLKEMVNKGISPDDSTYLSL-- 618
Query: 299 RLVGLGFLDII 309
+ G+G +D +
Sbjct: 619 -IEGMGNVDTL 628
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
+K SI D L+ C+ + A + F K + P ++T + ++ + +
Sbjct: 152 LSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEM 210
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L+ EM + + N ++ +CK G + +A + M +G +P+ SY+ IH
Sbjct: 211 AWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 270
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ +I R+LD+M+ + P+ +TY +I +CK ++EEA L D+M+E G P
Sbjct: 271 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 330
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN ++ +C++ ++ A M K+ +MP TYN+++ L GR A ++
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-- 296
+ M K+G P TY+++++G + G ++A M+ +GI P Y+S + +L
Sbjct: 391 KEMRKKGIIPDAITYNILINGY-SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449
Query: 297 RNRL 300
RNR+
Sbjct: 450 RNRM 453
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK + +A+ L+DEM +G
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG 294
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAE 354
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M G P T +L N
Sbjct: 355 KMLREMLSVGLKPDTGTYTMIINEFC-KKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMN 412
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G ++A + + M
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEM 290
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 291 SMKGLKPDKFTYTTLIDGCC-KEGDLDAAFEHRKRMIQENI 330
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 27/317 (8%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVK--------------------------TYSIL 50
LH+ C H HQ F AK V +S L
Sbjct: 1 LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G L +A + + E K V +LE + K G E+ G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I +H FC+ DI V D++ ++ L P+V +YN ++ + ++E ++
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T+ ++
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A E+++ M + P + TY+ +++GLC KKG L +A + M +G+ P
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLNQAHGLIDEMSMKGLKPDK 299
Query: 291 STVEMLRNRLVGLGFLD 307
T L + G LD
Sbjct: 300 FTYTTLIDGCCKEGDLD 316
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 152/319 (47%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M I ++Y + +++ LCK +K A +F + F P V +Y+ ++ G G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR++ D M + D + SL+ MCK G ++EA G+ +M IG P+A +Y+
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C D+ F D M + ++P+V TYN ++ L ++ EA ++ EM ++G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ + A L M + + P TY ++ +L R R A
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E + +G P V ++ MV G C G +E A + M + +PP T L
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDGHC-ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538
Query: 300 LVGLGFLDIIEILADKMER 318
G ++ +L D+M+R
Sbjct: 539 RCREGKVEEARMLLDEMKR 557
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 147/285 (51%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P Y L+ +CK ++ A FD + P TY+ L+ G + G+L A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
DEM+++ + +N L+ A+ G + EA M++EMR G PDA +Y+I I+
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F + + M + P TY +I L + +++EA L ++++++G +PD
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+NA++ HC V A L+ M +++V PD T+N +++ R G+ + A + +
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 553
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M++RG P +Y+ ++ G ++G +++A + + M+ G P
Sbjct: 554 EMKRRGIKPDHISYNTLISGY-GRRGDIKDAFRVRDEMLSIGFNP 597
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 7/311 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P+ + L+ C + ++ A + D K P+V TY++LV L G
Sbjct: 345 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 404
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + EM ++ D + +N L+ + GN +A + EM S G EP +Y+
Sbjct: 405 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ N + + + + + P+V +N ++ C N VE A+ LL EM +
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 524
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE ++N ++ C +V A L+ M + + PD +YN ++ R G A
Sbjct: 525 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF 584
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK-KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
V + M GF P++ TY+ ++ LCK ++G L E + + MV++GI P ST L
Sbjct: 585 RVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE--ELLKEMVNKGISPDDSTYLSL-- 640
Query: 299 RLVGLGFLDII 309
+ G+G +D +
Sbjct: 641 -IEGMGNVDTL 650
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
+K SI D L+ C+ + A + F K + P ++T + ++ + +
Sbjct: 174 LSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEM 232
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L+ EM + + N ++ +CK G + +A + M +G +P+ SY+ IH
Sbjct: 233 AWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 292
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ +I R+LD+M+ + P+ +TY +I +CK ++EEA L D+M+E G P
Sbjct: 293 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 352
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN ++ +C++ ++ A M K+ +MP TYN+++ L GR A ++
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-- 296
+ M K+G P TY+++++G + G ++A M+ +GI P Y+S + +L
Sbjct: 413 KEMRKKGIIPDAITYNILINGY-SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471
Query: 297 RNRL 300
RNR+
Sbjct: 472 RNRM 475
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP + ++ CK ++ VA +F + E P V+TY+ LV G VG L A
Sbjct: 232 VKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAF 291
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L DE++E+ + + +NS++ + G+++ A +L +M PD F+YSI I
Sbjct: 292 RLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGL 351
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ F+ L + +LV + F++N +I LC++ + A QLL M RG PD
Sbjct: 352 CRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDV 411
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++ ++ HC +V A+++ +M K P+ YN V+ + G FD A + ++
Sbjct: 412 VTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDT 471
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ + G + V TY+ ++HG C GK+++A F M + GI T L N L G
Sbjct: 472 LRRMGLF-DVVTYNTLIHGYC-NCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAG 529
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 153/353 (43%), Gaps = 40/353 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +++ + L L K V + + + + + V T+++++ LG G L EA
Sbjct: 123 GFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEA 182
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSYSIF 120
+ L+ +++ N +++ K G +D A ++R+M + +PD+ +Y+ F
Sbjct: 183 VSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSF 242
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++ FC+ ++ M + PNV TY ++ + +E A++L DE++E+G
Sbjct: 243 VNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGL 302
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR--- 237
P+ YN+I+ + ++ A L++ M + + PD+ TY++V++ L R G +
Sbjct: 303 LPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFK 362
Query: 238 --------------------------------ATEVWESMEKRGFYPSVSTYSVMVHGLC 265
A ++ +M RG P V T+ ++ C
Sbjct: 363 FLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHC 422
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
K GK+E A + +E M+ G P + N G D +L D + R
Sbjct: 423 -KDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRR 474
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 123/303 (40%), Gaps = 35/303 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+VE G+ P+ + ++H L ++ A D P TYSI++ GL G
Sbjct: 297 LVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGY 356
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA K +LE D +HN ++ +C++ N+ A +L M G PD ++
Sbjct: 357 LNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGT 416
Query: 120 FIHAFCEANDIHSVFRVLDSMKR---------YNLVPNVF-------------------- 150
I C+ + + +V + M + YN V N F
Sbjct: 417 LIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMG 476
Query: 151 -----TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
TYN +I C K+++A+ L EM G +YN ++ C V A
Sbjct: 477 LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKE 536
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M ++PD TY +++ + + E+ + M +G P TY MV L
Sbjct: 537 LMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLL 596
Query: 266 KKK 268
+++
Sbjct: 597 QEE 599
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C ++L+ + G + A+ ++ +++ G +++ F+ + ND++ +
Sbjct: 89 CKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFW 148
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ M Y + NV T+N II L K ++ EA ++ ++ G P+ ++N I+
Sbjct: 149 KMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGA 208
Query: 195 CDRAEVNMALRLITR---MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+++AL+L+ + M+ +V PD TYN + ++G A E + M +
Sbjct: 209 IKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIE 268
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
P+V TY+ +V G + G LE A + + +V++G+ P Y+S + L
Sbjct: 269 PNVRTYATLVDGY-TRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWL 316
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 6/270 (2%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P V + LVR +G A ++ ++ V + A N+ L + K +++
Sbjct: 92 SPAV--FDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWK 149
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
M +EM S G + ++++ I+A + + V+ + + PNV T+N II
Sbjct: 150 MYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209
Query: 161 KNEKVEEAYQLLDEM-IERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
K ++ A +L+ +M + G + PD +YN+ + C + +A M + + P
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEP 269
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
+ TY ++ RVG + A + + + ++G P+ Y+ ++H L +G +E A
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWL-SMEGDMEGASLL 328
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
M+D+ I P T ++ L G+L+
Sbjct: 329 LSDMIDKRIYPDQFTYSIVIEGLCRNGYLN 358
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M++ G KP++ + +++ K A D + V TY+ L+ G + G++
Sbjct: 437 MIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKI 496
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A LF EM + +N+L+ ++CKAG++ +A +++ M G PD +Y+I
Sbjct: 497 DQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTIL 556
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
I +F + V + D M +VP+ TY ++ L + E VE Y
Sbjct: 557 ITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEFDY 605
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A +IT++ + H +N L L+++ +R ++++ M G+ +V+T++++++
Sbjct: 112 AYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIY 171
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
L K+G+L EA + GI P T M+ + + +G +D+ L KME + C
Sbjct: 172 AL-GKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGC 230
Query: 323 TIQ 325
+++
Sbjct: 231 SVK 233
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 1/292 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G+ P+++ ++ + C+R + A + D TP V TY+ L+ GL ++ EA
Sbjct: 246 GVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAE 305
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+M+ D +NS+++ CK G + A +LR+ G PD +Y I+
Sbjct: 306 HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ DI V + L PN+ N +++ L + + +A +L++EM E G +PD
Sbjct: 366 CQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDI 425
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
W+YN ++ C V+ A L+ + +PD T+N ++ + + D A E+ +
Sbjct: 426 WTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDR 485
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M G P V TY+ +++GLC K GK E+ F++M+++G P T +L
Sbjct: 486 MWNHGVSPDVITYNSILNGLC-KAGKYEDVMGTFKLMMEKGCVPNIITYNIL 536
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 162/321 (50%), Gaps = 4/321 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P I ++L+H LC++ HV+ + + + K +P + T +I ++G
Sbjct: 207 MLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAM 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +L D + P D++ +N+L+ +CK + EA LR+M + G EPD F+Y+
Sbjct: 267 LNEAIRLLDGVGRGLTP-DVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNS 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + + ++L VP+ TY +I LC++ ++ A + +E +E+G
Sbjct: 326 IIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ N ++ + + AL+L+ M++ PD TYN+V+ L ++G A
Sbjct: 386 LKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDAD 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ +G P V T++ ++ G CKK KL+ A + + M + G+ P T + N
Sbjct: 446 NLVIDAIAKGHLPDVFTFNTLIDGYCKKL-KLDNAIEIVDRMWNHGVSPDVITYNSILNG 504
Query: 300 LVGLG-FLDIIEILADKMERS 319
L G + D++ ME+
Sbjct: 505 LCKAGKYEDVMGTFKLMMEKG 525
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G P I+ + +++ LCK V A D P V T++ L+ G +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ D M D++ +NS+L +CKAG ++ G + M G P+ +Y+I
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER- 178
+FC+A + +++ M+ L P+V + +++ C N ++ AYQL + E+
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ +YN ++ + +NMA +L +M + PD +TY +++ + G +
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSG 655
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G PS++T+ +++ LC K+ ++ EA +MV +GI P
Sbjct: 656 YSFLLVKIEKGLIPSLTTFGRVLNCLCLKR-RVHEAVGIIHLMVHKGIVP 704
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 2/249 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P ++ + L+ CK+ + A + D H +P V TY+ ++ GL G+ +
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F M+E+ C +I+ +N L E+ CKA ++EA ++ EM++ G PD ++ + FC+
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577
Query: 127 ANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ +++ + ++Y + TYN +I + A +L ++M E G +PD +
Sbjct: 578 NGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSY 637
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ C +N + ++ ++P T+ VL L R A + M
Sbjct: 638 TYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLM 697
Query: 246 EKRGFYPSV 254
+G P V
Sbjct: 698 VHKGIVPEV 706
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 9/281 (3%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+R G G++ EA +F+ M C + ++N+++ + + D+AH + MR G
Sbjct: 83 MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD ++++I + +FC + H+ R+L++M + Y +I + EA++
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHE 202
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L +EM+ G PD ++N ++ C + V + RL+ ++ K V P+ T N+ ++
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ + A + + + RG P V TY+ ++ GLCK K+ EA Y MV+EG P
Sbjct: 263 QRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNF-KVVEAEHYLRKMVNEGYEPDG 320
Query: 291 STVEMLRNRLVGLGFL-DIIEILADKM------ERSTSCTI 324
T + + LG + + +IL D + ST C++
Sbjct: 321 FTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 35/281 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+V++Y+ ++ L + +A K++ M ++ D+ +++ C+ A +
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M S G E A +Y I F E N + + M + P++ +N +I LC+
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT------------- 208
V+E+ +LL+++++RG +P+ ++ N + C RA +N A+RL+
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITY 288
Query: 209 ---------------------RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
+M E PD TYN ++ ++G A ++
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF 348
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+GF P STY +++GLC + G ++ A F +++G+ P
Sbjct: 349 KGFVPDESTYCSLINGLC-QDGDIDRAINVFNEAMEKGLKP 388
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G P+I + L + CK + V+ A + +++ TP V + L++G D G+
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A +LF + E+ K I +N ++ A N++ A + +M G PD+++Y
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I FC+ +I+S + L L+P++ T+ ++ LC +V EA ++ M+ +
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
G P+ N I + D+ EV ++ EN+M H
Sbjct: 701 GIVPE--VVNTI--FEADKKEVAAP-----KIVVENLMKKGH 733
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 4/304 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
LL +LCK HV+VA ++FD + + P+++ Y++L+ G +L A +L+ M
Sbjct: 220 LLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKR 279
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
++ + +L+E C+ ++A ++ EMR G EP+ Y+ I + EA
Sbjct: 280 ENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKE 339
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+++ P + TYN +++ CK + A ++L MI RG +P +YN
Sbjct: 340 AMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFR 399
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
Y + + L T+M + PDR TY++++K++ R D A +V + M RG
Sbjct: 400 YFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDL 459
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
++T +++VH LCK +LEEA FE M+ GI P T E + N L G ++ L
Sbjct: 460 DLATSTMLVHLLCKMH-RLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTEMARKL 518
Query: 313 ADKM 316
D M
Sbjct: 519 CDMM 522
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 45/254 (17%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS---YSIFIHAFCEANDIHSVFRV--- 136
NS+++ + K+ D A ++ + G EP+ S +++ I + A S R
Sbjct: 141 NSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRTFEF 200
Query: 137 ---LDSMKRYN-----------------------------------LVPNVFTYNCIIRK 158
LDS++ + VP++ YN ++
Sbjct: 201 AFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNG 260
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++ K++ A QL M P +Y ++ +C A+ L+ M + + P+
Sbjct: 261 WFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPN 320
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
YN ++ L GRF A + E P++STY+ +V G C K G L A K
Sbjct: 321 VIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFC-KAGDLVGASKVL 379
Query: 279 EMMVDEGIPPYSST 292
+MM+ G P +T
Sbjct: 380 KMMISRGFDPTLTT 393
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 163/334 (48%), Gaps = 10/334 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
EFG +PS+ + +L AL + K+ + ++N K E P V TY++L++ L G++
Sbjct: 137 EFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVD 196
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A KL EM + C D +++ +++ +MCK G++D+A RE+ ++ EP Y+ I
Sbjct: 197 GACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA----REL-AMKFEPVVPVYNALI 251
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C+ F +++ M + PNV +Y+ +I L VE + + M RG
Sbjct: 252 HGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCR 311
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ ++ +++ R V A+ L M +E V P+ YN ++ L G D A V
Sbjct: 312 PNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISV 371
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
W MEK P+V+TYS +++G K G L AC+ + M++ G P + + L
Sbjct: 372 WNQMEKDSIRPNVTTYSTIIYGF-AKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430
Query: 302 GLGFLDIIEILADKMERSTSC--TIQELANAMRG 333
+ D L D M S C T+ N ++G
Sbjct: 431 QMSMFDQAFDLIDNM-ISDGCPPTVITFNNFIKG 463
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 4/317 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P++ + L+H LC ++ A ++ K P V TYS ++ G G+
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + +++M+ C +++ + +++ +C+ D+A ++ M S G P +++
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNN 459
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI C A + VLD M++Y +PN+ TYN ++ L + EA L+ E+ ER
Sbjct: 460 FIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERK 519
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN I+ L+L+ +M + D T N + ++G+ A
Sbjct: 520 VEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAI 579
Query: 240 EVWESME-KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-R 297
+V +++ ++ F + T+++++ G+C G EEA Y M+ GI P +T +L R
Sbjct: 580 KVLDNISAEKEFRADIITHTIILWGICNWLGT-EEAVVYLHEMLKRGIFPNIATWNVLVR 638
Query: 298 NRLVGLGFLDIIEILAD 314
LG + I IL D
Sbjct: 639 GFFSKLGHMGPIRILDD 655
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ ++ L +V+++ F P V+T++ L++G G
Sbjct: 270 MVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGR 329
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L++ M+ +++A+N+L+ +C GN+DEA + +M P+ +YS
Sbjct: 330 VGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYST 389
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F ++ D+ S + M PNV Y C++ LC+ ++A+ L+D MI G
Sbjct: 390 IIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG 449
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P ++N + C V A+ ++ +M K +P+ TYN +L L R F A
Sbjct: 450 CPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREAC 509
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ +E+R TY+ +++G G ++ + M+ GI + TV N
Sbjct: 510 GLIRELEERKVEFDCVTYNTIMYGF-SFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNA 568
Query: 300 LVGLG 304
LG
Sbjct: 569 YCKLG 573
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 136/311 (43%), Gaps = 31/311 (9%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T TY ++ LG E+ L +M P +++ ++ ++
Sbjct: 70 FKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGL 129
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
M +R G EP Y++ + A N + + ++MK L PNVFTYN +++ L
Sbjct: 130 KMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKAL 189
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM----------------- 202
C+N KV+ A +LL EM +G +PD+ SY +++ C +V+
Sbjct: 190 CQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNA 249
Query: 203 -------------ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
A L+ M V P+ +Y+ V+ L +G + + V+ M RG
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG 309
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
P+V T++ ++ G +G++ +A + +M+ EG+ P L + L G +D
Sbjct: 310 CRPNVQTFTSLIKGF-FVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA 368
Query: 310 EILADKMERST 320
+ ++ME+ +
Sbjct: 369 ISVWNQMEKDS 379
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+ P + + LL+ CK ++K A + + PTV TY+ L+ G +G+
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EAR+L +EM+E+ C D+ + L+ K N+ A EM S G +PD F+Y+
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + F++ + M + P+ TYN II LCK +++A +L +M+ G
Sbjct: 489 RICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDG 548
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC+R + A +L+ M + + P TY +++ R G A
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAY 608
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M G P+ TY+V++H LC G+ A ++F M++ G+ P T +L
Sbjct: 609 GWFRKMLDVGIEPNEITYNVLIHALC-MTGRTPLAFRHFHEMLERGLAPNKYTYTLL 664
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 2/291 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
K S + + L+ AL +R V+ A ++E PTV TY+ ++ GL + A+
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM D++ +NSLL CKAGN+ EA +L ++R G P +Y+ I +C
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ R+ + M P+V TY ++ K + A + DEM+ +G PD +
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN + + MA +L M + + PD TYN+++ L + G A + M
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G P TY+ ++H C ++G L EA K MV +G+ P T +L
Sbjct: 545 VSDGLQPDCITYTCLIHAHC-ERGLLREARKLLNGMVSDGLQPSVVTYTIL 594
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + L+ C+ + A + + + P V TY+IL+ G V L+ A
Sbjct: 408 GLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMA 467
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+ FDEML + D A+N+ + A + A + M G PD +Y++ I
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDG 527
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ R+ M L P+ TY C+I C+ + EA +LL+ M+ G P
Sbjct: 528 LCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPS 587
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ C R + A +M + P+ TYN+++ L GR A +
Sbjct: 588 VVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFH 647
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M +RG P+ TY++++ G C++ + YFEM GIPP
Sbjct: 648 EMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMH-QNGIPP 691
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 1/269 (0%)
Query: 20 LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDI 79
L + H++ A + D+ + + TY+ L+ L + G + +A L EM +
Sbjct: 284 LAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTV 343
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
+ +N+++ + K + A EMR++G PD +Y+ ++ +C+A ++ +L
Sbjct: 344 VTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGD 403
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
++R L P V TYN +I C+ + EA +L +EM+E+G PD +Y ++
Sbjct: 404 LRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRN 463
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
+ MA M + + PD YN + + + A ++ E M +G YP TY+V
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNV 523
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ GLC K G L++A + MV +G+ P
Sbjct: 524 IIDGLC-KTGNLKDAKRLKTKMVSDGLQP 551
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 37/287 (12%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
H P V+ + ++R L D + R ++ EML+ + I+ +N+LL++ K G DE
Sbjct: 196 HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDE 255
Query: 98 AHGMLREMRSIGA------------------------------------EPDAFSYSIFI 121
A +L+EM + G + +F+Y+ I
Sbjct: 256 ASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLI 315
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A E + + M+ ++P V TYN II L K E+ E A EM G
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN++L +C + AL L+ + + + P TYN ++ R+G A +
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E M ++G +P V TY+++++G +K L A ++F+ M+ +G+ P
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNG-SRKVRNLAMAREFFDEMLSKGLQP 481
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY++++ GL G L +A++L +M+ D + + L+ A C+ G + EA +
Sbjct: 516 PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M S G +P +Y+I +H C +++S + M + PN TYN +I LC
Sbjct: 576 LNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCM 635
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ A++ EM+ERG P++++Y ++ +C A+RL M + + PD T
Sbjct: 636 TGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 695
Query: 222 YNMVLK 227
+N + K
Sbjct: 696 HNALFK 701
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A RL+T V PD N VL++L R+D V+ M + P++ TY+ ++
Sbjct: 189 AFRLVT---CHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLD 245
Query: 263 GLCKKKGKLEEACKYFEMMVDE--GIPPYSSTVEMLRNRLVGLGFLDIIEILADKM---E 317
K+G+ +EA + M + G T ++ + L G L+ L D M +
Sbjct: 246 SFL-KEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK 304
Query: 318 RSTSCTIQELANAMRGKTGFRKSRSEETELESD 350
+++S T L A+ + RK+ + + E+E++
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENE 337
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 154/326 (47%), Gaps = 5/326 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEM 70
L+ + ALCK H + A + + E P +TY++L+ G + + KL+ EM
Sbjct: 158 LNMAVGALCKEGHPRPAAKLVKRCRREGELAPDERTYNMLLDGWSTARRMDKVGKLWAEM 217
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
++++ +L++A+C+ D+A +L EMR G E + + + +HA A
Sbjct: 218 CVAGVRPTVVSYGTLIKAVCRVQQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRF 277
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+ +L+ Y + PN+ T+N ++ CK + A +L M+ RG P +YN
Sbjct: 278 RDAYNLLEKFPLYGVAPNISTFNSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYF 337
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ V + + L +M PD+ TYN+++K+L R + ++ + M GF
Sbjct: 338 FVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVKMLCEANRLELVVQMIKEMRANGF 397
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
++T ++++H LC+ + EEAC F+ M G P T ML L LG +++ E
Sbjct: 398 ESDLATSTMLIHLLCRSH-RFEEACAEFKDMFRRGHVPQYITYRMLMKELKRLGLVELEE 456
Query: 311 ILADKMERSTSCTIQELANAMRGKTG 336
L D M T +L + R K G
Sbjct: 457 KLTDLMRSVPHST--KLPGSYREKEG 480
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G++P++ L+ A+C+ V +
Sbjct: 217 MCVAGVRPTVVSYGTLIKAVCR----------------------------------VQQP 242
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A L DEM + +++ N ++ A+ AG +A+ +L + G P+ +++
Sbjct: 243 DQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAPNISTFNSL 302
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ A+C+ D+ VL +M ++P TYN K VE L ++M+ G
Sbjct: 303 VLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGY 362
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +YN ++ C+ + + +++I M D T M++ LL R RF+ A
Sbjct: 363 APDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFESDLATSTMLIHLLCRSHRFEEACA 422
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ M +RG P TY +++ L K+ G +E K ++M
Sbjct: 423 EFKDMFRRGHVPQYITYRMLMKEL-KRLGLVELEEKLTDLM 462
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 149/293 (50%), Gaps = 7/293 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G+K + L+ LC++ + A + F + E +P V TY+ +V GL +
Sbjct: 25 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRI 84
Query: 61 SEARKLFDEMLER-----KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
E +LFD+M +R C D+++++++++A+CKA +D+A+ + MR++G P+
Sbjct: 85 DEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 144
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+YS I C+ + + + +L +K ++VP YN ++ + K E +LL M
Sbjct: 145 TYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHM 204
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
E+G + +NA+L E A + R+ K P+ TYN+ + L + G+
Sbjct: 205 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKV 264
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIP 287
D A + M + P V TYS ++ G C K G++++A F MMV E IP
Sbjct: 265 DEAYRILLEMVESKVTPDVITYSSIIDGFC-KAGRMDKADDVFTRMMVHECIP 316
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 165/364 (45%), Gaps = 56/364 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G +I D + +LHAL K + A QFF+ K P V TY++ V GL G+
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
+ EA ++ EM+E K D++ ++S+++ CKAG +D+A
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323
Query: 99 --HG------------MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
HG + +M + G P +Y++ + C A+ + S + MKR
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV---- 200
P+ TY +I+ LC+ +V+EA + LD M P+ +A++ C + EV
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 443
Query: 201 ---------------NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+ A+ +I +M + V PD TY VL+ L + R D A +E M
Sbjct: 444 SVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKM 503
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
RG P + TY++++ C ++A + FE MV G P + T+ L + L G+
Sbjct: 504 ASRGCAPGLVTYTLLIGEACSAD-MADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 562
Query: 306 LDII 309
D++
Sbjct: 563 QDLL 566
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 146/268 (54%), Gaps = 11/268 (4%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ ++ G G++ +A +L DEM ER +D+L H++L++ +C+ G IDEA L + +
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFK 58
Query: 107 SIGAE--PDAFSYSIFIHAFCEANDIHSVFRVLDSM-KRYNLV----PNVFTYNCIIRKL 159
S+G E P+ +Y+ ++ C+AN I + D M KRY P+V +Y+ +I L
Sbjct: 59 SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK ++V++AY+ M G P+ +Y++++ C V+ A L+ ++ E+++P
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
YN V+ R G+ E+ M+++GF ++ ++ M+H L K + E+AC++FE
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ-EKACQFFE 237
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
++ G P T + + L G +D
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVD 265
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 151/317 (47%), Gaps = 7/317 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN------AKHEFTPTVKTYSILVRGLGDVGELS 61
P++ + +++ LCK + + FD+ A H P V +YS ++ L +
Sbjct: 66 PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 125
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A + F M C +++ ++SL++ +CK +DEA+ +L +++ P A Y+ +
Sbjct: 126 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVV 185
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ F +L MK N+ +N ++ L KN++ E+A Q + +++ G
Sbjct: 186 NGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKK 245
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +YN + C +V+ A R++ M + V PD TY+ ++ + GR D+A +V
Sbjct: 246 PNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDV 305
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ M P T+ ++HG + K K EA + E MV+ G P T +L + +
Sbjct: 306 FTRMMVHECIPHPVTFMTLLHGFSEHK-KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC 364
Query: 302 GLGFLDIIEILADKMER 318
G ++ + KM+R
Sbjct: 365 GADSVESALEIYHKMKR 381
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 54/361 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G P++ L+ LCK V A+ K E P Y+ +V G G+
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK 193
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SE +L M E+ ++I+ N++L A+ K ++A + G +P+ +Y++
Sbjct: 194 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 253
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK------------------ 161
+H C+A + +R+L M + P+V TY+ II CK
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313
Query: 162 -----------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++K EA+++ ++M+ G P +YN ++ C V AL
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ +M ++ PD +TY +++ L R R D A E + ME P+ + +V L
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 433
Query: 265 CK------------------KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
CK K G+ +EA + E MV +G+ P +T + L GL +
Sbjct: 434 CKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRV 493
Query: 307 D 307
D
Sbjct: 494 D 494
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G+KP++ L+ K + A FD E P+ TY+I + GL VG
Sbjct: 514 MLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGR 573
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA+ + + +E+ L +NS+++ K G++ A REM G P+ +Y+
Sbjct: 574 TSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTT 633
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ N+ ++ + M+ L ++ Y +I CK + +E A L E+++ G
Sbjct: 634 LINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGG 693
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ YN++++ + + + AL L RM E + D TY ++ L++ GR A
Sbjct: 694 LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLAL 753
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ M +G P + Y+V+++GLC KG+LE A K M + I P
Sbjct: 754 DLYSEMSAKGIIPDIIIYTVLINGLC-GKGQLENAQKILAEMERDSITP 801
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
I P+++ ++ L+ K + + A + FD A + TY+ L+ L G++SEA
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATT 474
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L+ +ML++ +++NS++ C+ GN+D A + +M G +P+ +YSI + +
Sbjct: 475 LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D F V D M N+VP+ FTYN I LCK + EA +L + +E+G P
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN+I+ V+ AL M + V P+ TY ++ + D A ++ M
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+G ++ Y ++ G CKK+ +E A F ++D G+ P Y+S + RN
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQ-DIETASWLFSELLDGGLSPNSVIYNSLISGYRN 710
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I PS + + ++ LCK A + F P TY+ ++ G G
Sbjct: 549 MVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGS 608
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A + EM E +++ + +L+ CK N D A M EMR+ G E D +Y
Sbjct: 609 VSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGA 668
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ DI + + + L PN YN +I +E A L M+ G
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +Y ++ + +AL L + M+ + ++PD Y +++ L G+ + A
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ ME+ P+V Y+ ++ G K G L+EA + M+D+G+ P +T ++L N
Sbjct: 789 KILAEMERDSITPNVPIYNALIAGHF-KAGNLQEAFRLHNEMLDKGLTPNDTTYDILIN 846
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 146/363 (40%), Gaps = 71/363 (19%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
F I + LL++ K + A F+ + + P +K + L+ L + E
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYE 227
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
AR+++++M+ + D + ++ A K N +EA E +S G + DA +YSI I
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVP----------------------------------- 147
AFC+ D+ +L M+ VP
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
NV +++ CK +K+ A + D+M E G +P+ +Y ++ + C + A L
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407
Query: 208 TRMTKENVMP----------------------------------DRHTYNMVLKLLVRVG 233
T+M +N+ P + TYN +L L + G
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEG 467
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ AT +W+ M +G P+ +Y+ M+ G C ++G L+ A F M+D G+ P T
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHC-RQGNLDMAASVFSDMLDCGLKPNVITY 526
Query: 294 EML 296
+L
Sbjct: 527 SIL 529
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
VE G P + ++ K V A + + + +P V TY+ L+ G
Sbjct: 585 VEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNT 644
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+ +EM + +DI A+ +L++ CK +I+ A + E+ G P++ Y+
Sbjct: 645 DLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSL 704
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I + N++ + + M + ++ TY +I L K ++ A L EM +G
Sbjct: 705 ISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGI 764
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD Y ++ C + ++ A +++ M ++++ P+ YN ++ + G A
Sbjct: 765 IPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFR 824
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M +G P+ +TY ++++G K
Sbjct: 825 LHNEMLDKGLTPNDTTYDILINGKIK 850
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P++ L++ CK + +A + + +++ + Y L+ G +
Sbjct: 619 MCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQD 678
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF E+L+ + + +NSL+ N++ A + + M G D +Y+
Sbjct: 679 IETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTT 738
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + M ++P++ Y +I LC ++E A ++L EM
Sbjct: 739 LIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDS 798
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
P+ YNA++A H + A RL M + + P+ TY++++ ++ G
Sbjct: 799 ITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 1/264 (0%)
Query: 25 HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
++ V H + +F ++ Y+ L+ +L++A F+ ++E I N
Sbjct: 155 NILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNF 214
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
LL A+ K I EA + +M G D F+ I + A + N+ + K
Sbjct: 215 LLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRG 274
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ + Y+ +I+ CKN VE A LL +M ++G P E ++ +++ + + AL
Sbjct: 275 VKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEAL 334
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL M V + ++K + + A E ++ M + G P+ TY+V++
Sbjct: 335 RLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWC 394
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C K G + +A + M ++ I P
Sbjct: 395 C-KNGNMAKAYDLYTQMKNKNICP 417
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P I L++ LC + ++ A + + + TP V Y+ L+ G G L EA
Sbjct: 763 GIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEA 822
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
+L +EML++ + ++ L+ K GN
Sbjct: 823 FRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 20 LCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
LC V A + D H ++ ++ G G+L+ AR FDEM +R D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
+ + +L+ +C+AG + EA +L+EM G + DA +Y++ I +C+ + F V +
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M + + PNV TY + LCK V A +LL EM +G + ++YN+++ C
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ A+R + M + + PD +TY ++ L + DRA + + M +G P++ TY+
Sbjct: 510 NLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYN 569
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V+++G C G++E + E M+++ I P ++T L
Sbjct: 570 VLMNGFC-MSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 152/271 (56%), Gaps = 2/271 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LC+ +K A + + + TY++L+ G VG+++EA + ++M++++
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ + +L + +CK G++ A+ +L EM S G E + F+Y+ I+ C+A ++
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R + M L P+V+TY II LC++++++ A+ LL EM+++G P +YN ++
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V RL+ M ++N+ P+ TYN ++K TE+++ M + P+
Sbjct: 576 CMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNE 635
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+TY++++ G CK + ++EA + M+++G
Sbjct: 636 NTYNILIKGHCKAR-NMKEALYFHSEMIEKG 665
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP V TY+ L GL G++ A +L EM + ++I +NSL+ +CKAGN+++A
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ +M G +PD ++Y+ I A C++ ++ +L M + P + TYN ++ C
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ +VE +LL+ M+E+ +P+ +YN+++ +C + + M + V+P+ +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++K + A M ++GF + S+Y+ ++ L KKK K EA + FE
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK-KFTEARRLFEK 695
Query: 281 MVDE 284
M E
Sbjct: 696 MRKE 699
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL ALC +K AHQ FD P V TY I+V G + EL A KL EM R
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASP--PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
++ +A+ S++ +C G + +A ++ +M G DA ++ + FC D+ +
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
D M++ L + TY +I LC+ +++EA ++L EM ++G + D +Y ++ +C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
++ A + +M ++ V P+ TY + L + G A E+ M +G ++
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEI 311
TY+ +++GLC K G LE+A + M + G+ P T + L LD +++
Sbjct: 497 TYNSLINGLC-KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 312 LADKMERSTSCTIQELANA--MRGK 334
+ DK + T T L N M G+
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGR 580
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ ++ C++ + A +FD K TY+ L+ GL GE
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ EM ++ VD + + L++ CK G + EA + +M P+ +Y+
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ D+ + +L M L N+FTYN +I LCK +E+A + + +M E G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y I+ C E++ A L+ M + + P TYN+++ GR +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ E M ++ +P+ +TY+ ++ C +K ++ + ++ M+ + + P +T +L
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEK-NMKSTTEIYKGMLSQEVVPNENTYNIL 641
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 8/245 (3%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +LF E+ E+ + ++N LL+A+C AG I +AH + EM S PD +Y I
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C +++ + ++L M L N Y +I LC +V +A +++++M+ G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + +++ C + ++ A M K + D TY ++ L R G A
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V + ME +G TY+V++ G C K GK+ EA MV + + P T L +
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYC-KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 300 LVGLG 304
L G
Sbjct: 470 LCKQG 474
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 129/266 (48%), Gaps = 9/266 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-----TVKTYSILVRGLG 55
MV+ + P++ L LCK+ V A++ HE + TY+ L+ GL
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELL----HEMCSKGLELNIFTYNSLINGLC 506
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
G L +A + +M E D+ + +++ A+C++ +D AH +L+EM G +P
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y++ ++ FC + + R+L+ M N+ PN TYN ++++ C + ++ ++ M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ + P+E +YN ++ HC + AL + M ++ +YN +++LL + +F
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMV 261
A ++E M K Y+ +
Sbjct: 687 TEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++GI PS + +L C R + A Q F + T +Y+IL++ L G + +
Sbjct: 219 QYGISPSPESCNAVL---C-RLPLDEAVQLFQELPEKNT---CSYNILLKALCTAGRIKD 271
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +LFDEM P D++ + ++ C ++ A +L EM + G E + +Y+ I
Sbjct: 272 AHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + RV++ M + +V + + ++ C+ + A DEM +RG
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y A++ C E+ A R++ M + + D TY +++ +VG+ A V
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M ++ P+V TY+ + GLC K+G + A + M +G+ T L N L
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLC-KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507
Query: 303 LGFLD 307
G L+
Sbjct: 508 AGNLE 512
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++ +I+ + L++ LCK +++ A D + P V TY+ ++ L E
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L EML++ I+ +N L+ C +G ++ +L M P+ +Y+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C ++ S + M +VPN TYN +I+ CK ++EA EMIE+G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
SYNA++ + + A RL +M KE + + YN + L
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
N +YN +++ LC ++++A+QL DEM + PD +Y ++ +C +E+ A++L+
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ M + + Y V+ LL G+ A V E M G + ++ ++ G C +
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC-R 367
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
KG L A +F+ M G+ T L N L G L E + +ME
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 36/213 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+KP +Y ++ ALC+ K + AH + PT+ TY++L+ G G
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLE-------------------------------- 87
+ ++L + MLE+ + +NSL++
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640
Query: 88 ---AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
CKA N+ EA EM G A SY+ I + R+ + M++
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKER 700
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
L YN I + +E L DE++E
Sbjct: 701 LTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P+ + L+ C K++K + + E P TY+IL++G
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS--IGAEPDAFSY 117
+ EA EM+E+ + ++N+L+ + K EA + +MR + AEPD +++
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
I + +F E N + S + D + LV ++
Sbjct: 711 YIDL-SFNEDN-LESTLALCDELVEVTLVKSI 740
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+KPS+ L+ AL +R+ + + P + TY+I +R LG G
Sbjct: 218 MISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + M + C D++ + L++A+C AG +D+A + +MR+ +PD +Y
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F D+ +V R M+ P+V TY ++ LCK+ KV++A+ +LD M RG
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ + ++ AL L M V P ++Y + + ++G ++A
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +E M+KRG PS++ + ++ L + G++ EA F + + G+ P S T M+
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSL-AEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 141/294 (47%), Gaps = 3/294 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+ LCK+K A + FD PT ++Y+ L+ GL A KLF EM
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
C +I +N LL+A K+ IDE + EM G +P+ +++I I A ++N I+
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ + + P TY +I L K + EEA ++ +EM + P+ YN ++
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
VN+A L RM KE + PD +Y ++++ L GR D A +E ++ G P
Sbjct: 938 FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+Y++M++GL K + +LEEA F M + GI P T L G +D
Sbjct: 998 TVSYNLMINGLGKSR-RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVD 1050
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 37/332 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ ALC + A + + + P + TY L+ G+ G+L
Sbjct: 292 GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETV 351
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR----------------- 106
++ + EM D++ + L+EA+CK+G +D+A ML MR
Sbjct: 352 KRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISG 411
Query: 107 ------------------SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
S+G P A+SY +FI + + D + MK+ ++P+
Sbjct: 412 LLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ N + L + ++ EA + +++ G +PD +YN ++ + +++ A +L+T
Sbjct: 472 IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLT 531
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M E PD N ++ L + GR D A +++ ++ P+V TY++++ GL K+
Sbjct: 532 EMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGL-GKE 590
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
GKL +A F M + G PP + T L + L
Sbjct: 591 GKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP+I + ++ AL K + K +++ +F+PT TY L+ GL G EA
Sbjct: 853 GCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEA 912
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F+EM + +C + +N L+ KAGN++ A + + M G PD SY+I +
Sbjct: 913 MKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVEC 972
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + +K L P+ +YN +I L K+ ++EEA L EM RG +P+
Sbjct: 973 LFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPE 1032
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YNA++ + + V+ A ++ + + P+ TYN +++ + G DRA V++
Sbjct: 1033 LYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFK 1092
Query: 244 SMEKRGFYPSVSTYS 258
M G P+ T++
Sbjct: 1093 KMMIVGCSPNAGTFA 1107
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 3/277 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+ P+ Y + K + A F+ K P++ + + L ++G
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ +F+++ D + +N +++ KAG ID+A +L EM S G EPD +
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS 547
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A + +++ +K L P V TYN +I L K K+ +A L M E G
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++NA+L C V++AL++ RMT N PD TYN ++ L++ GR A
Sbjct: 608 CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAF 667
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ M K+ P T ++ G+ K G++E+A K
Sbjct: 668 WFYHQM-KKFLSPDHVTLYTLLPGVV-KDGRVEDAIK 702
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 1/272 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY + + L G + +A +M + ++ ++N L+ + + G EA + + M
Sbjct: 159 TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRM 218
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G +P +YS + A D ++ +L+ M+ L PN++TY IR L + ++
Sbjct: 219 ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRI 278
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++AY +L M + G PD +Y ++ C +++ A L T+M + PD TY +
Sbjct: 279 DDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITL 338
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ G + W ME G+ P V TY+++V LC K GK+++A ++M G
Sbjct: 339 MSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALC-KSGKVDQAFDMLDVMRVRG 397
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
I P T L + L+ L LD L + ME
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 149/355 (41%), Gaps = 38/355 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
GI PSI + L++L + ++ A F++ + +P TY+++++ G++ +A
Sbjct: 467 GIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKA 526
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL EML C DI+ NSL++ + KAG +DEA M ++ + P +Y+I I
Sbjct: 527 TKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITG 586
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + SMK PN T+N ++ LCKN+ V+ A ++ M +PD
Sbjct: 587 LGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPD 646
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA----- 238
+YN I+ A +M K+ + PD T +L +V+ GR + A
Sbjct: 647 VLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVM 705
Query: 239 -----------TEVWESM-----------EKRGFYPSVSTYSV---------MVHGLCKK 267
+VW + E F + S+ ++ LCK+
Sbjct: 706 EFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQ 765
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
K L+ + + G P + L + L+G + L +M+ + C
Sbjct: 766 KKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 140/300 (46%), Gaps = 2/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G P+I+ + LL A K K + + ++ P + T++I++ L
Sbjct: 814 MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A L+ E++ + L+ + KAG +EA + EM +P+ Y+I
Sbjct: 874 INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F +A +++ + M + + P++ +Y ++ L +V++A +E+ G
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD SYN ++ + AL L + M + P+ +TYN ++ G D+A
Sbjct: 994 LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E ++ G P+V TY+ ++ G K G + A F+ M+ G P + T L N+
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGH-SKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F +Y+ L+ L G EA K++ M+ + +++L+ A+ + +
Sbjct: 188 FVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIM 247
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+L EM ++G P+ ++Y+I I A I + +L +M+ P+V TY +I L
Sbjct: 248 DLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDAL 307
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C K+++A +L +M PD +Y +++ + ++ R + M + PD
Sbjct: 308 CAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDV 367
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TY ++++ L + G+ D+A ++ + M RG P++ TY+ ++ GL + +L+EA + F
Sbjct: 368 VTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLR-RLDEALELFN 426
Query: 280 MMVDEGIPP 288
M G+ P
Sbjct: 427 NMESLGVAP 435
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 36/234 (15%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + N S F+++ + N+V T N ++ L + +VE+ + D M ++
Sbjct: 96 LKSISDPNSALSYFKMVSQLP--NIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVI 153
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
N + +Y I + + A + +M + + + ++YN ++ L++ G A +
Sbjct: 154 NRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKK-------------------------------- 268
V++ M G PS+ TYS ++ L +++
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273
Query: 269 --GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
G++++A + M DEG P T +L + L G LD + L KM S+
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G P + + L+H LCK + A F K PTV +++ L+ G G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + +L M+E + D+ ++ L+ +CK G +D+A+ + EM G P+ +++
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + M R + P+V TYN +I LCK + EA +L+ EM +RG
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C ++ AL + M KE + D + ++ R G+ A
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
M + G P +TY++++HG C KKG ++ K + M +G P T +L N
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFC-KKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514
Query: 300 LVGLGFLDIIEILADKM 316
L G + +L D M
Sbjct: 515 LCKQGQMKNANMLLDAM 531
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 149/294 (50%), Gaps = 4/294 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQF--FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G++P++ + L++ CK ++ + F F P V TYS+L+ GL G+L +
Sbjct: 255 GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF-PDVFTYSVLINGLCKEGQLDD 313
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A KLF EM +R + + +L+ C G D + ++M G +PD +Y+ I+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLIN 373
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ D+ +++ M + L P+ FTY +I CK +E A ++ EM++ G
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++ A+++ C +V A R + M + + PD TY MV+ + G ++
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M+ G P V TY+V+++GLC K+G+++ A + M++ G+ P T +L
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLC-KQGQMKNANMLLDAMLNLGVVPDDITYNIL 546
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 134/267 (50%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E + P ++ L++ LCK + A++ F + P T++ L+ G G
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++ +ML + D++ +N+L+ +CK G++ EA ++ EM G +PD F+Y++
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ D+ S + M + + + + +I C+ +V EA + L EM+E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C + +V +L+ M + +P TYN++L L + G+ A
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ ++M G P TY++++ G CK
Sbjct: 526 MLLDAMLNLGVVPDDITYNILLEGHCK 552
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 124/226 (54%), Gaps = 1/226 (0%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S A ++E+L+ P D+ N L+ +CK I+EA + E+ G P S++
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ +C++ ++ FR+ M + P+VFTY+ +I LCK ++++A +L EM +RG
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ ++ ++ HC ++ + + +M ++ V PD TYN ++ L +VG A +
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M +RG P TY++++ G C K+G LE A + + MV EGI
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCC-KEGDLESALEIRKEMVKEGI 431
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 23/308 (7%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFF---------DNAKHEFTPTVK---------TYSIL 50
SI+ + H LC K + A ++A FT ++ +S+L
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNS--LLEAMCKAGNIDEAHGMLREMRSI 108
+ D G S+A + F L RK + I H+ L + + K A E+
Sbjct: 162 MNAYTDSGYFSDAIQCFR--LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD +++ +H C+ + I+ + + + L P V ++N +I CK+ +++
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++L M+E PD ++Y+ ++ C +++ A +L M ++P+ T+ ++
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
GR D E+++ M ++G P V TY+ +++GLC K G L EA K M G+ P
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC-KVGDLREAKKLVIEMTQRGLKP 398
Query: 289 YSSTVEML 296
T ML
Sbjct: 399 DKFTYTML 406
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 135/292 (46%), Gaps = 24/292 (8%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
+ +H F ++ +Y + L LSEA+ L ++ RK + +S+ ++ +A
Sbjct: 94 STQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKN---SASSVFTSVLEARG 150
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI----HSVFRVLDSMKRYNLV---- 146
+++ + + + + FS +I +++ HS + D + + NL
Sbjct: 151 THQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAW 210
Query: 147 ------------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
P+V +N ++ +LCK K+ EA L E+ +RG P S+N ++ +
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ RL M + V PD TY++++ L + G+ D A +++ M RG P+
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
T++ +++G C G+ + + ++ M+ +G+ P T L N L +G L
Sbjct: 331 VTFTTLINGHC-VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP + + L++ LCK ++ A + + + P TY++L+ G G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ EM++ +D +A +L+ C+ G + EA LREM G +PD +Y++
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 120 FIHAFCEANDIHSVFRVL-----------------------------------DSMKRYN 144
IH FC+ D+ + F++L D+M
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+VP+ TYN ++ CK+ E+ +L E+G D SY +++
Sbjct: 536 VVPDDITYNILLEGHCKHGNREDFDKLQS---EKGLVQDYGSYTSLIG 580
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 20 LCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
LC V A + D H ++ ++ G G+L+ AR FDEM +R D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
+ + +L+ +C+AG + EA +L+EM G + DA +Y++ I +C+ + F V +
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M + + PNV TY + LCK V A +LL EM +G + ++YN+++ C
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ A+R + M + + PD +TY ++ L + DRA + + M +G P++ TY+
Sbjct: 510 NLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYN 569
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V+++G C G++E + E M+++ I P ++T L
Sbjct: 570 VLMNGFC-MSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 152/271 (56%), Gaps = 2/271 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LC+ +K A + + + TY++L+ G VG+++EA + ++M++++
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ + +L + +CK G++ A+ +L EM S G E + F+Y+ I+ C+A ++
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R + M L P+V+TY II LC++++++ A+ LL EM+++G P +YN ++
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V RL+ M ++N+ P+ TYN ++K TE+++ M + P+
Sbjct: 576 CMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNE 635
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+TY++++ G CK + ++EA + M+++G
Sbjct: 636 NTYNILIKGHCKAR-NMKEALYFHSEMIEKG 665
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP V TY+ L GL G++ A +L EM + ++I +NSL+ +CKAGN+++A
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ +M G +PD ++Y+ I A C++ ++ +L M + P + TYN ++ C
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ +VE +LL+ M+E+ +P+ +YN+++ +C + + M + V+P+ +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++K + A M ++GF + S+Y+ ++ L KKK K EA + FE
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK-KFTEARRLFEK 695
Query: 281 MVDE 284
M E
Sbjct: 696 MRKE 699
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL ALC +K AHQ FD P V TY I+V G + EL A KL EM R
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASP--PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
++ +A+ S++ +C G + +A ++ +M G DA ++ + FC D+ +
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
D M++ L + TY +I LC+ +++EA ++L EM ++G + D +Y ++ +C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
++ A + +M ++ V P+ TY + L + G A E+ M +G ++
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEI 311
TY+ +++GLC K G LE+A + M + G+ P T + L LD +++
Sbjct: 497 TYNSLINGLC-KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 312 LADKMERSTSCTIQELANA--MRGK 334
+ DK + T T L N M G+
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGR 580
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ ++ C++ + A +FD K TY+ L+ GL GE
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ EM ++ VD + + L++ CK G + EA + +M P+ +Y+
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ D+ + +L M L N+FTYN +I LCK +E+A + + +M E G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y I+ C E++ A L+ M + + P TYN+++ GR +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ E M ++ +P+ +TY+ ++ C +K ++ + ++ M+ + + P +T +L
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEK-NMKSTTEIYKGMLSQEVVPNENTYNIL 641
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 8/245 (3%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +LF E+ E+ + ++N LL+A+C AG I +AH + EM S PD +Y I
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C +++ + ++L M L N Y +I LC +V +A +++++M+ G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + +++ C + ++ A M K + D TY ++ L R G A
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V + ME +G TY+V++ G C K GK+ EA MV + + P T L +
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYC-KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 300 LVGLG 304
L G
Sbjct: 470 LCKQG 474
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 126/252 (50%), Gaps = 9/252 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-----TVKTYSILVRGLG 55
MV+ + P++ L LCK+ V A++ HE + TY+ L+ GL
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELL----HEMCSKGLELNIFTYNSLINGLC 506
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
G L +A + +M E D+ + +++ A+C++ +D AH +L+EM G +P
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y++ ++ FC + + R+L+ M N+ PN TYN ++++ C + ++ ++ M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ + P+E +YN ++ HC + AL + M ++ +YN +++LL + +F
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686
Query: 236 DRATEVWESMEK 247
A ++E M K
Sbjct: 687 TEARRLFEKMRK 698
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++GI PS + +A+ R + A Q F + T +Y+IL++ L G + +
Sbjct: 219 QYGISPS----PESCNAVLCRLPLDEAVQLFQELPEKNT---CSYNILLKALCTAGRIKD 271
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +LFDEM P D++ + ++ C ++ A +L EM + G E + +Y+ I
Sbjct: 272 AHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + RV++ M + +V + + ++ C+ + A DEM +RG
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y A++ C E+ A R++ M + + D TY +++ +VG+ A V
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M ++ P+V TY+ + GLC K+G + A + M +G+ T L N L
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLC-KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507
Query: 303 LGFLD 307
G L+
Sbjct: 508 AGNLE 512
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++ +I+ + L++ LCK +++ A D + P V TY+ ++ L E
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L EML++ I+ +N L+ C +G ++ +L M P+ +Y+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C ++ S + M +VPN TYN +I+ CK ++EA EMIE+G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
SYNA++ + + A RL +M KE + + YN + L
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
N +YN +++ LC ++++A+QL DEM + PD +Y ++ +C +E+ A++L+
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ M + + Y V+ LL G+ A V E M G + ++ ++ G C +
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC-R 367
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
KG L A +F+ M G+ T L N L G L E + +ME
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 36/213 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+KP +Y ++ ALC+ K + AH + PT+ TY++L+ G G
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLE-------------------------------- 87
+ ++L + MLE+ + +NSL++
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640
Query: 88 ---AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
CKA N+ EA EM G A SY+ I + R+ + M++
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKER 700
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
L YN I + +E L DE++E
Sbjct: 701 LTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P+ + L+ C K++K + + E P TY+IL++G
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS--IGAEPDAFSY 117
+ EA EM+E+ + ++N+L+ + K EA + +MR + AEPD +++
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
I + +F E N + S + D + LV ++
Sbjct: 711 YIDL-SFNEDN-LESTLALCDELVEVTLVKSI 740
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P+ L+ CK V+ A + + + + E P+V T++ L+ GL E
Sbjct: 454 MINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNE 513
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA KLFDEM+ERK + +N ++E CKA N+D+A +L +M G PD ++Y
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + +D + + NL N Y+ ++ C ++ EA EMI+RG
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D + ++ + ++ L+ +M + + PD Y ++ + G F ++
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
E + M +P+V TY+ ++GLC K G+++ A FE M+ I P S T
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLC-KVGEIDRAGHLFEKMLTANISPNSVT 745
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 2/284 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSE 62
FG P+++ + L++ALCK + + A + N P TYSIL+ G L
Sbjct: 352 FGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDV 411
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A F M+E I +NSL+ CK G++ A + +M + G EP A +++ I
Sbjct: 412 AESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLIS 471
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ + F++ M + P+V+T+ +I LC ++ EA +L DEM+ER P
Sbjct: 472 GYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKP 531
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
E +YN ++ +C ++ A L+ M ++PD +TY ++ L GR A +
Sbjct: 532 TEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFI 591
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + K+ + YS ++HG C +G+L EA M+ GI
Sbjct: 592 DDLHKKNLKLNEMCYSALLHGYC-GQGRLTEALSASCEMIQRGI 634
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLF 67
SI + L+H LCK V A + + + + V TY LV G V + + L
Sbjct: 252 SIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLM 311
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+EM+E A + L++ + K GNID A+ ++ ++ G P+ F Y+ I+A C+
Sbjct: 312 NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKG 371
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
D+ + +M NL N TY+ +I CK ++ A MIE G + Y
Sbjct: 372 EDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPY 431
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N+++ HC +++ A L T+M E + P T+ ++ + + ++A +++ M +
Sbjct: 432 NSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNE 491
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ PSV T++ +++GLC ++ EA K F+ MV+ I P T ++
Sbjct: 492 KEIAPSVYTFTALIYGLCSTN-EMAEASKLFDEMVERKIKPTEVTYNVM 539
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ + CKR + VA +F + T+ Y+ L+ G G+LS A L+ +M+
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+L+ CK +++A + REM P ++++ I+ C N++
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++ D M + P TYN +I CK +++A++LL++M+ G PD ++Y +++
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V+ A I + K+N+ + Y+ +L GR A M +RG +
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
++V++ G K++ ++ + M D+G+ P Y+S ++
Sbjct: 639 VCHAVLIDGAMKQQ-DMKRLFGLLKKMYDQGLRPDSVIYTSMID 681
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P Y+ ++ G ++ + D M+ KC +++ + + + +CK G ID A +
Sbjct: 671 PDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHL 730
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+M + P++ +Y F+ + + ++ + M + L+ N TYN +IR CK
Sbjct: 731 FEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCK 789
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ EA ++L EM E G PD +Y+ I+ HC +V A+ L M ++ V PD
Sbjct: 790 LGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVA 849
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYP---------SVSTYSVMVHGLCKKKGKLE 272
+N+++ G D+A E+ M RG P + + ++HG C G+++
Sbjct: 850 FNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGC-VTGEVD 908
Query: 273 EACKYFEMMVDEGI 286
A + + M+ +
Sbjct: 909 TALRLYHSMLTRAV 922
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V+T S ++ GL + + ++FDE + D ++++ ++C+ + A
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ M S + +Y++ IH C+ + V S++ L +V TY ++ C+
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ ++ L++EM+E G P E + + ++ + ++ A L+ ++ + +P+
Sbjct: 301 VQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFV 360
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + D+A ++++M + TYS+++ CK+ G L+ A YF M
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKR-GMLDVAESYFGRM 419
Query: 282 VDEGIP----PYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+++GI PY+S + N G L E L KM
Sbjct: 420 IEDGIRETIYPYNSLI----NGHCKFGDLSAAEFLYTKM 454
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 11/251 (4%)
Query: 8 PSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ ++ LCK + + H F +P TY + L G + EA L
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
EML + + +N L+ CK G + EA +L EM G PD +YS I+ C
Sbjct: 766 HHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP---- 182
+ D+ + + D+M R + P+ +N +I C N +++A++L ++M+ RG P
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQIL 884
Query: 183 -----DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
D N ++ C EV+ ALRL M V + + L V
Sbjct: 885 QLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYLLSYGVISKSE 944
Query: 238 ATEVWESMEKR 248
EV ES+ KR
Sbjct: 945 ELEVNESITKR 955
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+ +H++ + + VL M L+P V T + I+ L + K +++ D
Sbjct: 148 TLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFD 207
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
E + G PD ++ +A++ C+ + A I M TYN+++ L + G
Sbjct: 208 ESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGG 267
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
A EV +S+ ++G V TY +V G C+ + + ++ MV+ G P + V
Sbjct: 268 GVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQ-QFDDGICLMNEMVELGFVPTEAAV 326
Query: 294 EMLRNRLVGLGFLDIIEILADKMER 318
L + L G +D L K+ R
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKLGR 351
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 11/273 (4%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLE--RKCPVD-ILAHNSLLEAMCKAGNIDEAHGMLR 103
+++L+RG S+ + +F++ LE ++C L + L+ + + + +A +LR
Sbjct: 120 HTLLLRG-------SDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLR 172
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M P+ + S ++ V+ V D + P+ +T + +IR LC+ +
Sbjct: 173 LMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELK 232
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
A + + M + +YN ++ C V AL + + ++ + D TY
Sbjct: 233 DFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYC 292
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ RV +FD + M + GF P+ + S +V GL +KKG ++ A +
Sbjct: 293 TLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGL-RKKGNIDSAYDLVVKLGR 351
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G P L N L LD E+L M
Sbjct: 352 FGFLPNLFVYNALINALCKGEDLDKAELLYKNM 384
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I + +L+ +C+ V A +F +N + P +Y+I+++GL
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL +EM + CP +++ N L+ +C+ G ++ A +L ++ G P++ SY+
Sbjct: 67 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HAFC+ + ++ M P++ +YN ++ LC+N +V+ A LL ++ +G
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG 186
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P SYN ++ + AL L+ M + + PD TY + L R + + A
Sbjct: 187 CSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAI 246
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ G P+V Y+ ++ GLCK++ + A F M+ G P ST +L
Sbjct: 247 RTFCKVQDMGIRPTVVLYNAILLGLCKRR-ETHNAIDLFSYMISNGCMPNESTYTIL 302
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 39/274 (14%)
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI----- 119
KL DEM ++ C DI+ +N +L +C+ G +D+A L + S G EP+ SY+I
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 120 ------------------------------FIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
I C + VL+ + +Y PN
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
+YN ++ CK +K+++A ++ M+ RG PD SYN +L C EV++A+ L+ +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ + P +YN V+ L + G+ A E+ + M +G P + TY+ + GLC++
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED- 240
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
K+EEA + F + D GI P TV + L+GL
Sbjct: 241 KIEEAIRTFCKVQDMGIRP---TVVLYNAILLGL 271
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 1/250 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G P++ + L+ LC+R V+ A + + K+ TP +Y+ L+ +
Sbjct: 77 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 136
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + M+ R C DI+++N+LL A+C+ G +D A +L +++ G P SY+
Sbjct: 137 MDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNT 196
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +LD M L P++ TY I LC+ +K+EEA + ++ + G
Sbjct: 197 VIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMG 256
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P YNAIL C R E + A+ L + M MP+ TY ++++ L G A
Sbjct: 257 IRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEAR 316
Query: 240 EVWESMEKRG 249
++ + RG
Sbjct: 317 DLLGQLCSRG 326
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELS 61
++G P+ + LLHA CK+K + A F + P + +Y+ L+ L GE+
Sbjct: 114 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVD 173
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A L ++ + C ++++N++++ + KAG EA +L EM S G +PD +Y+
Sbjct: 174 VAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIA 233
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + I R ++ + P V YN I+ LCK + A L MI G
Sbjct: 234 SGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCM 293
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
P+E +Y ++ V A L+ ++ V+ + +K+L
Sbjct: 294 PNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMKKGAVKML 341
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++L+ M + PD TYN+VL + + GR D A E E++ G P+ +Y++++ G
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
L + + E+A K E M +G PP T ML + L G ++
Sbjct: 61 LFTAE-RWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVE 103
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D A+ + EM G P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIINEFC-KKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMN 430
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K++ A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G +A ++ + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 348
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----------------EFTPTVKT----- 46
P+ LH+ C H HQ AK F ++T
Sbjct: 10 PANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQR 69
Query: 47 -----YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 70 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLD 334
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G KP++ + L+ LCK+ +K A + + ++ + P V T++ L+ GL G
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A +LF +++ ++ + S++ CK ++ A + M+ G P+ +Y+
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+A + +++ M +PN++TYN I LCK + EAY+LL++
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------------------------- 213
G D +Y ++ C + ++N AL RM K
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 214 ----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++P + TY ++ + G D A + + +M++ G P TY ++ G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LCKK ++EACK +E M+D G+ P
Sbjct: 578 LCKKS-MVDEACKLYEAMIDRGLSP 601
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++ CK + A F K + P V TY+ L+ G G A +
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M + +I +N+ ++++CK EA+ +L + S G E D +Y+I I C
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ NDI+ M + ++ N +I C+ +K++E+ +L ++ G P +
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++++ +C ++++AL+ M + +PD TY ++ L + D A +++E+M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 246 EKRGFYPSVSTYSVMVHGLCKK 267
RG P T + + CK+
Sbjct: 595 IDRGLSPPEVTRVTLAYEYCKR 616
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 131/268 (48%), Gaps = 6/268 (2%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG 93
D TP+ T + ++ ++G + A +FDEM R D ++ ++ + G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
I EA L M G PD + ++ + A CE ++ M PN+ +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LCK +++A+++L+EM+ G P+ +++ A++ C R A RL ++ +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 214 NVM-PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ P+ HTY ++ + + +RA ++ M+++G +P+V+TY+ +++G C K G
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC-KAGSFG 410
Query: 273 EACKYFEMMVDEGIPP----YSSTVEML 296
A + +M DEG P Y++ ++ L
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGEL 60
G P+IY + + +LCK+ A++ + A F+ ++ TY+IL++ ++
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA---FSCGLEADGVTYTILIQEQCKQNDI 479
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A F M + D+ +N L+ A C+ + E+ + + + S+G P +Y+
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +C+ DI + +MKR+ VP+ FTY +I LCK V+EA +L + MI+RG
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+P E + + +C R + A+ L+ + K+
Sbjct: 600 SPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+L + G ++EA GM+ +M++ G P + + + + E I V D M
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+VP+ +Y ++ ++ K++EA + L MI+RG PD + IL C+ VN A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+M P+ + ++ L + G +A E+ E M + G+ P+V T++ ++ GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 265 CKKKGKLEEACKYFEMMV 282
C K+G E+A + F +V
Sbjct: 333 C-KRGWTEKAFRLFLKLV 349
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 16 LLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ A C++K +K + + F PT +TY+ ++ G++ A K F M
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D + SL+ +CK +DEA + M G P + + +C+ ND +
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L+ + + + V T ++RKLC +KV A +++E+ ++ D + A
Sbjct: 624 ILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
Query: 195 CDRAEVNMALRLITRMTK 212
+ + N+ L R+++
Sbjct: 681 SESGKNNLVTDLTERISR 698
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++R + ++ EA ++ +M +G P + N +L + + A + M+
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V+PD +Y +++ R G+ A M +RGF P +T ++++ LC + G +
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENGLVNR 270
Query: 274 ACKYFEMMVDEGIPP 288
A YF M+D G P
Sbjct: 271 AIWYFRKMIDLGFKP 285
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+N A+ ++ M + + P T N VL++ V +G + A V++ M RG P S+Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+MV G C + GK++EA ++ M+ G P ++T ++ L G ++
Sbjct: 221 KLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MV G+KP++Y L+ LCK + A + F + P V TY++++ G G
Sbjct: 169 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 228
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ A L M+E+ + + +L+ CK G+ D A ++ +M+ G P+ ++Y+
Sbjct: 229 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 288
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+ I ++VL L + TY +I + CK + A L D M+E
Sbjct: 289 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 348
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y ++++ +C + ++ + + + ++P + TY ++ +VGR A
Sbjct: 349 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 408
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E M + G + TY ++ GLCK+ +LEEA +E M+D+ + P
Sbjct: 409 LRVFERMVQNGCFADSITYGALISGLCKES-RLEEAKALYEGMLDKRLVP 457
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+ P L+ C+ V+ ++ F+ T +++VR L + G
Sbjct: 64 MTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 123
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + F MLE P +++ + + ++ +CK + +A +L EM G +P+ ++++
Sbjct: 124 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183
Query: 120 FIHAFCEANDIHSVFRV-LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ FR+ L +K + PNV TY +I C+ K+ A LL M+E+
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 243
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +Y ++ HC + A L+ +M +E +P+ +TYN V+ + G+ A
Sbjct: 244 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+V +G TY++++ C K+G + A F+ MV+ G P
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHC-KQGHITYALDLFDRMVENGCCP 352
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 3/296 (1%)
Query: 29 AHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
A + FD + +P + + LV G++ E L M +D ++
Sbjct: 57 ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
++C+ G + R M G P+ +Y+ +I C+ + F VL+ M L P
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRL 206
NV+T+ +I LCK E A++L ++I+ + P+ +Y ++ +C ++ A L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ RM ++ + P+ +TY ++ + G FDRA E+ M++ GF P++ TY+ ++ G CK
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
K GK++EA K M +G+ T +L G + L D+M + C
Sbjct: 297 K-GKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 351
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
+V G+ G L EA + EM P+ + N +L + G+ A + M G
Sbjct: 9 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
P + + C + V +L +M RY + T ++R LC+ + ++
Sbjct: 69 VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ M+E G P+ +Y A + C R V A ++ M + P+ +T+ ++ L
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 230 VRVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G +RA ++ + K Y P+V TY+VM+ G C ++GKL A MV++G+ P
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYC-REGKLARAEMLLVRMVEQGLKP 247
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++T L G D L +KM++
Sbjct: 248 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 277
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 12/335 (3%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P+++ L+ LCK V+ A F+ + + P + YS L+ GL G + EARK
Sbjct: 195 EPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARK 254
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D M+ R P +A+ S++ +CK G I EA ++EMR P +YS + +
Sbjct: 255 LVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYI 314
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ F V++ M + P+ +Y I L + EEA ++ + M+E+G PD
Sbjct: 315 GMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMH 374
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y I+ C + A ++ M K V P+R+ Y M++ V+ R + A E+++ +
Sbjct: 375 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI 434
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV--DEGIPPYSSTVEMLRNRLVGL 303
K G PS TY+ +++ LCK K K++EA + M E + P T M+ + L +
Sbjct: 435 LKDGILPSTVTYNTVINALCKLK-KMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKV 493
Query: 304 GFLD-IIEILADKMERST-------SCTIQELANA 330
G + ++LA+ ++ + IQ LA A
Sbjct: 494 GMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 528
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 159/383 (41%), Gaps = 71/383 (18%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G +++ + LL AL + H+ A FF ++ E P V +++IL+RG +
Sbjct: 91 GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE--PNVSSFNILLRGFAARDDFEVVN 148
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L EM R + H +L A+C ++D+A + EP F+Y++ +
Sbjct: 149 ALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGL 208
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+A+ + V + M R P++ Y+ +I L K +V+EA +L+D M+ RG P
Sbjct: 209 CKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTA 268
Query: 185 WSYNAILAYHCDRAEVNMALRLITRM---------------------------------- 210
+Y +I+A C + A++ I M
Sbjct: 269 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEE 328
Query: 211 -TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK--- 266
+ PD +Y M ++ L +GR + A +V+E+M ++G P + TY +++ CK
Sbjct: 329 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 388
Query: 267 -------------------------------KKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
K +LEEA + ++ ++ +GI P + T
Sbjct: 389 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNT 448
Query: 296 LRNRLVGLGFLDIIEILADKMER 318
+ N L L +D L +M+R
Sbjct: 449 VINALCKLKKMDEALELLREMQR 471
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A + P +Y++ + L +G EA K+F+ M+E+ C D+ + +++ CK G++
Sbjct: 330 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 389
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
A +LR M +P+ + Y++ + F +++ + + + + ++P+ TYN +
Sbjct: 390 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 449
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
I LCK +K++EA +LL EM R P +Y+ I+ A L+ M
Sbjct: 450 INALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN 509
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V+PD TY +++ L G+ RA E+ E M K G +P TY +V LC+ ++
Sbjct: 510 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS--DVDA 567
Query: 274 ACKYFEMMVDEGIPP 288
A + M+ G P
Sbjct: 568 AWDLLQEMMRNGHTP 582
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 13/272 (4%)
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
+ NSLL A+ + G++ +A G + S EP+ S++I + F +D V +L
Sbjct: 96 LFTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLR 152
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
MK + N T+ I+ LC +++A + + P ++Y ++ C
Sbjct: 153 EMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAH 212
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+V A + M ++ PD Y+ ++ L + GR D A ++ + M RG P+ Y+
Sbjct: 213 KVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYT 272
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILAD 314
+V GLC K G+++EA K + M + P T + +G+G ++ ++E +AD
Sbjct: 273 SIVAGLC-KCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMAD 331
Query: 315 KMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
+ C ++ M + + R EE E
Sbjct: 332 R-----DCAPDTISYTMFIEALYSIGRREEAE 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGELS 61
GI PS + +++ALCK K + A + K E P++ TYS+++ GLG VG
Sbjct: 438 GILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 497
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A L EM++ D + SL++ + AG + A +L EM G PD +Y +
Sbjct: 498 RAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 557
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
C +D+ + + +L M R PN FT+ +
Sbjct: 558 QILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAV 590
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 20 LCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
LC V A + D H ++ ++ G G+L+ AR FDEM +R D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
+ + +L+ +C+AG + EA +L+EM G + DA +Y++ I +C+ + F V +
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M + + PNV TY + LCK V A +LL EM +G + ++YN+++ C
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ A+R + M + + PD +TY ++ L + DRA + + M +G P++ TY+
Sbjct: 510 NLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYN 569
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V+++G C G++E + E M+++ I P ++T L
Sbjct: 570 VLMNGFC-MSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 152/271 (56%), Gaps = 2/271 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LC+ +K A + + + TY++L+ G VG+++EA + ++M++++
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ + +L + +CK G++ A+ +L EM S G E + F+Y+ I+ C+A ++
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R + M L P+V+TY II LC++++++ A+ LL EM+++G P +YN ++
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V RL+ M ++N+ P+ TYN ++K TE+++ M + P+
Sbjct: 576 CMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNE 635
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+TY++++ G CK + ++EA + M+++G
Sbjct: 636 NTYNILIKGHCKAR-NMKEALYFHSEMIEKG 665
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 130/241 (53%), Gaps = 1/241 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP V TY+ L GL G++ A +L EM + ++I +NSL+ +CKAGN+++A
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ +M G +PD ++Y+ I A C++ ++ +L M + P + TYN ++ C
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ +VE +LL+ M+E+ +P+ +YN+++ +C + + M + V+P+ +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++K + A M ++GF + S+Y+ ++ L KKK K EA + FE
Sbjct: 637 TYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK-KFTEARRLFEK 695
Query: 281 M 281
M
Sbjct: 696 M 696
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL ALC +K AHQ FD P V TY I+V G + EL A KL EM R
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASP--PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
++ +A+ S++ +C G + +A ++ +M G DA ++ + FC D+ +
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
D M++ L + TY +I LC+ +++EA ++L EM ++G + D +Y ++ +C
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
++ A + +M ++ V P+ TY + L + G A E+ M +G ++
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEI 311
TY+ +++GLC K G LE+A + M + G+ P T + L LD +++
Sbjct: 497 TYNSLINGLC-KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 312 LADKMERSTSCTIQELANA--MRGK 334
+ DK + T T L N M G+
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGR 580
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ ++ C++ + A +FD K TY+ L+ GL GE
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA ++ EM ++ VD + + L++ CK G + EA + +M P+ +Y+
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ D+ + +L M L N+FTYN +I LCK +E+A + + +M E G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y I+ C E++ A L+ M + + P TYN+++ GR +
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ E M ++ +P+ +TY+ ++ C +K ++ + ++ M+ + + P +T +L
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEK-NMKSTTEIYKGMLSQEVVPNENTYNIL 641
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 8/245 (3%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA +LF E+ E+ + ++N LL+A+C AG I +AH + EM S PD +Y I
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C +++ + ++L M L N Y +I LC +V +A +++++M+ G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + +++ C + ++ A M K + D TY ++ L R G A
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V + ME +G TY+V++ G C K GK+ EA MV + + P T L +
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYC-KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469
Query: 300 LVGLG 304
L G
Sbjct: 470 LCKQG 474
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++GI PS + +A+ R + A Q F + T +Y+IL++ L G + +
Sbjct: 219 QYGISPS----PESCNAVLCRLPLDEAVQLFQELPEKNT---CSYNILLKALCTAGRIKD 271
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +LFDEM P D++ + ++ C ++ A +L EM + G E + +Y+ I
Sbjct: 272 AHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + RV++ M + +V + + ++ C+ + A DEM +RG
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y A++ C E+ A R++ M + + D TY +++ +VG+ A V
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M ++ P+V TY+ + GLC K+G + A + M +G+ T L N L
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLC-KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507
Query: 303 LGFLD 307
G L+
Sbjct: 508 AGNLE 512
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++ +I+ + L++ LCK +++ A D + P V TY+ ++ L E
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L EML++ I+ +N L+ C +G ++ +L M P+ +Y+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C ++ S + M +VPN TYN +I+ CK ++EA EMIE+G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
SYNA++ + + A RL +M K+ + + YN + L
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDL 714
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
N +YN +++ LC ++++A+QL DEM + PD +Y ++ +C +E+ A++L+
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ M + + Y V+ LL G+ A V E M G + ++ ++ G C +
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC-R 367
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
KG L A +F+ M G+ T L N L G L E + +ME
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 36/213 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+KP +Y ++ ALC+ K + AH + PT+ TY++L+ G G
Sbjct: 521 MDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 580
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLE-------------------------------- 87
+ ++L + MLE+ + +NSL++
Sbjct: 581 VEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNI 640
Query: 88 ---AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
CKA N+ EA EM G A SY+ I + R+ + M++
Sbjct: 641 LIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDR 700
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
L YN I + +E L DE++E
Sbjct: 701 LTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P+ + L+ C K++K + + E P TY+IL++G
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS--IGAEPDAFSY 117
+ EA EM+E+ + ++N+L+ + K EA + +MR + AEPD +++
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
I + +F E N + S + D + LV ++
Sbjct: 711 YIDL-SFNEDN-LESTLALCDELVEVTLVKSI 740
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P ++ LL LCK + V A ++ P V TY+ L+ GL G + K
Sbjct: 193 RPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTK 252
Query: 66 LFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L ++M ++R P D + ++ +CK G + +L E G + +Y+ I+ +
Sbjct: 253 LLEKMEIQRHSP-DCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGY 311
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ + VL MKR + P V T+N +I C KV +A L +M G +P+
Sbjct: 312 CKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNT 371
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N++++ C E +ALRL+ M + V+PDR TY + + L G+ + A ++
Sbjct: 372 VTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSC 431
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ +G Y+ +VHG C + G ++ A E M E P T L + L +
Sbjct: 432 LPMKGIKAHNVIYTSLVHGYC-QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVK 490
Query: 305 FLDIIEILADKMERS----TSCTIQELANAM 331
LD L DKM++ T+CT L M
Sbjct: 491 RLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 37/328 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV G+ P++ + L+ LC+ + + + +P TY+ +V GL G+
Sbjct: 222 MVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGK 281
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ K+ E + + +++L +N+L+ CK G++ A +L+ M+ P +++
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH FC +H L M L PN T+N +I C + + A +LLD M E G
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401
Query: 180 ANPDEWSY-----------------------------------NAILAYHCDRAEVNMAL 204
PD +Y +++ +C +++ A
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ +M EN MPD HTYN ++ L +V R DRA ++ + M+K+G P+ T+++++ +
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSST 292
K K +A K +E M+ G P T
Sbjct: 522 LWDK-KHADAAKMYEQMISSGCKPDKQT 548
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 145/309 (46%), Gaps = 3/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK--TYSILVRGLGDVG 58
M E G+ P + + L+ LC+ + A F + +Y+IL++GL G
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAG 175
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ +A ++F +M C + + LL+ +CK + EA +L EM + G P+ +Y+
Sbjct: 176 RIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYN 235
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ V ++L+ M+ P+ +TY ++ LCK+ KV ++L E I +
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G + +YNA++ +C ++ AL ++ M + V P T+N V+ G+ +A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M G P+ T++ ++ G C G+ + A + ++M + G+ P T + +
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQC-SVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414
Query: 299 RLVGLGFLD 307
L G L+
Sbjct: 415 ALCDEGQLE 423
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 18/350 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G+ P+ + L+ C K+A + D ++ P +TY+I + L D G+
Sbjct: 362 MAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQ 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA LF + + + + SL+ C+ G+ID A G++ +M S PD +Y+
Sbjct: 422 LEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNT 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + +LD MK+ + P T+N +I+++ ++K +A ++ ++MI G
Sbjct: 482 LIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSG 541
Query: 180 ANPDEWSYNAILA---YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
PD+ +Y ++ + E N+ + ++ M + V PD TYN ++K V G +
Sbjct: 542 CKPDKQTYTLKISTDWFEGATKEENIDMAVV-EMHEAGVFPDVETYNAIIKAYVDAGLKE 600
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK-------------LEEACKYFEMMVD 283
+A M P +TYS++++ +C K + + FE M +
Sbjct: 601 KAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCE 660
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRG 333
P ST + L L L+ +E L KM+ ++ +++++ + G
Sbjct: 661 SDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLG 710
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY+ L+ + L++AR M E D +N L+ +C+AG + A G+
Sbjct: 88 PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGL 147
Query: 102 LREM-RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+M R GA D +SY+I I C A I RV M R P V TY ++ LC
Sbjct: 148 FVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLC 207
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K +V EA LL EM+ +G P+ +YNA++ C + +L+ +M + PD
Sbjct: 208 KVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCW 267
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY V+ L + G+ +V +G V TY+ +++G C K G ++ A ++
Sbjct: 268 TYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYC-KGGDMKAALDVLQL 326
Query: 281 M----VDEGIPPYSSTV 293
M V+ G+ ++ +
Sbjct: 327 MKRNRVNPGVQTFNEVI 343
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F ML+ P + +N+L+ A CK + +A L MR G PD F+Y+ + C
Sbjct: 78 FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137
Query: 127 ANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
A + + + M +R+ + ++Y +I+ LC ++++A ++ +M P
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y +L C V A L+ M + V+P+ TYN ++ L + GRFD T++ E M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG- 304
E + P TY+ +VHGLC K GK+ K + +G+ T L N G
Sbjct: 258 EIQRHSPDCWTYTQVVHGLC-KHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGD 316
Query: 305 ---FLDIIEIL 312
LD+++++
Sbjct: 317 MKAALDVLQLM 327
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 23/278 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P ++ + L+ LCK K + A D K + PT T++IL++ + + ++A K+
Sbjct: 474 PDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKM 533
Query: 67 FDEMLERKCPVD-----ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+++M+ C D + E K NID A + EM G PD +Y+ I
Sbjct: 534 YEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAII 590
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK--------NEK------VEE 167
A+ +A F M + P+ TY+ ++ +C NEK V
Sbjct: 591 KAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRN 650
Query: 168 AYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
+L ++M E A P +Y A+L C++ + L+ +M +++ D + +L
Sbjct: 651 LQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLG 710
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ + A E + SM + F P + + +++ GLC
Sbjct: 711 CYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLC 748
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 24/234 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ I P LL+ +C + FDN K + + DV L
Sbjct: 609 MLSVPIDPDCTTYSILLNYMCNKDDSDA----FDNEK-------------IWKMVDVRNL 651
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR--SIGAEPDAFSYS 118
E LF++M E I + +LL +C ++E +L +M+ SI + D Y
Sbjct: 652 QE---LFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDY- 707
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C SM + P + + ++ LC + A + +M+
Sbjct: 708 -LLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGL 766
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
G N DE + ++ ++ L +++ M + + TY +++L+ +
Sbjct: 767 GYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAEL 820
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G PS+Y + L+H CK +++A FD K P+V +++ L+ G +G+
Sbjct: 127 ILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGD 186
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M D+ ++ L+ +CK +DEA+ ML EM G P+ +++
Sbjct: 187 LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTT 246
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +P++ TYN +I LC+ + +A L++EMI +G
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKG 306
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C ++ + L RM +EN+ D TY ++ L R GR A
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAE 366
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P TY+++++ C K G ++ A K M G P
Sbjct: 367 KMLREMLTVGLKPDNGTYTMIMNEFC-KTGDVKTASKLLREMQRNGPVP 414
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ E+LE P + N L+ CK G + A + + P S++ ++ +
Sbjct: 123 FYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K++EA ++L+EM++ G P+
Sbjct: 183 RLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC +V++A+ + +M + +PD TYN ++ L R G +A ++ E M
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE + + M+ E I
Sbjct: 303 IMKGLKPDKITYTTLIDGSC-KEGDLEITFELRKRMIRENI 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 147/328 (44%), Gaps = 27/328 (8%)
Query: 17 LHALCKRKHVKVAHQFF----------------DNAKHEFTPTVKT----------YSIL 50
LH+ C H HQ D+ F ++T +S L
Sbjct: 13 LHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVFSGL 72
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G + +A + F + K V +LE + K G +E+ G
Sbjct: 73 MLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGY 132
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
P + ++I +H FC+ ++ V D++ +++L P+V ++N ++ + ++E ++
Sbjct: 133 PPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M G PD ++Y+ ++ C ++++ A ++ M ++P+ T+ ++
Sbjct: 193 LKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHC 252
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ G+ D A E+++ M +GF P + TY+ +++GLC ++G L +A E M+ +G+ P
Sbjct: 253 KNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLC-RRGDLGQARDLVEEMIMKGLKPDK 311
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMER 318
T L + G L+I L +M R
Sbjct: 312 ITYTTLIDGSCKEGDLEITFELRKRMIR 339
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 150/284 (52%), Gaps = 4/284 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G P+ + L+ LCKR A + FD + TP VKT++IL+ + + G+
Sbjct: 200 MVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQ 259
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF-SYS 118
L EA L + M ++ CP D + +N+ L +CKAG +DEA L +R G YS
Sbjct: 260 LKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYS 319
Query: 119 IFIHAFCEANDIHSVFRV-LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I A F+ ++ +++ + P++ Y +IR + ++++A+ DEM E
Sbjct: 320 CLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKE 379
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+ PD + YN +L CD +++ A L++ M + NV+ D +T+ +++ L + D
Sbjct: 380 KRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDE 439
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
A +V++ M + G +P+V TY+V++ GL + +LEEA F M
Sbjct: 440 AMQVFDGMVEVGCHPTVMTYNVLIDGLYRAH-RLEEARMLFYKM 482
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 5/319 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
EFG +P+ + + +L L V +A ++ P TY++L+ GL G
Sbjct: 166 EFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTA 225
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A KLFDEML+R ++ H LL +MC AG + EA +L M G PD +Y+ F
Sbjct: 226 VDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAF 285
Query: 121 IHAFCEANDIHSVFRVLDSMKRYN-LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+A + L++++R V + Y+C+I L + EE +Q E++E+
Sbjct: 286 LSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQA 345
Query: 180 A-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+PD Y ++ + ++ A M ++ PD YN +LK L G D A
Sbjct: 346 DFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGA 405
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M + +T+++M+HGLCKK+ ++EA + F+ MV+ G P T +L +
Sbjct: 406 RSLMSEMAQNNVVLDTNTHTIMIHGLCKKQ-LVDEAMQVFDGMVEVGCHPTVMTYNVLID 464
Query: 299 RLVGLGFLDIIEILADKME 317
L L+ +L KME
Sbjct: 465 GLYRAHRLEEARMLFYKME 483
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 16/266 (6%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+ +F+P + Y+I++RG + G + +A FDEM E++ D +N+LL+A+C +G++D
Sbjct: 344 QADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLD 403
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A ++ EM D +++I IH C+ + +V D M P V TYN +I
Sbjct: 404 GARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLI 463
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANP--------------DEWSYNAILAYHCDRAEVNM 202
L + ++EEA L +M E G NP D S ++ C +V
Sbjct: 464 DGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLK 522
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A +L+ + V+PD TYN +L L +V D A ++ ++ +GF TY ++
Sbjct: 523 AYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLID 582
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
L + + +A F+ ++ G P
Sbjct: 583 SLLRAH-RYNDAMTLFQDILHIGGTP 607
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 5/290 (1%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM-LERKCPVDILAHNSLLEAMCKA 92
D P + L+ G EA F M E C +N++L + +
Sbjct: 127 DAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVAS 186
Query: 93 GNIDE-AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
G + A + M + G P+ +Y++ + C+ ++ D M + + PNV T
Sbjct: 187 GGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKT 246
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ ++ +C +++EA LL+ M ++G PDE +YNA L+ C V+ A+ + +
Sbjct: 247 HTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 306
Query: 212 KENV-MPDRHTYNMVLKLLVRVGRFDRATEVW-ESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ + Y+ ++ L GR++ + + E +E+ F P + Y++M+ G C + G
Sbjct: 307 RTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRG-CAEAG 365
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
++++A +F+ M ++ P + L L G LD L +M ++
Sbjct: 366 RIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQN 415
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++H LCK++ V A Q FD + PTV TY++L+ GL L EAR LF +M
Sbjct: 427 MIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGN 486
Query: 75 CPVDIL-------------AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
P L + L+++MC++G + +A+ +LR + G PD +Y+ +
Sbjct: 487 NPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLL 546
Query: 122 HAFCEANDIHSVFRV-------------------LDSM---KRYN-------------LV 146
+ C+ ++ R+ +DS+ RYN
Sbjct: 547 NGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGT 606
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQL-LDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P++ YN I+R LC+ K+ +A D ++++ + A + ++ A+R
Sbjct: 607 PSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEAVR 666
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ ++ +E + Y + L L++ R D A +++ +E+ G + + + + LC
Sbjct: 667 ELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLC 726
Query: 266 KKK 268
+K
Sbjct: 727 WEK 729
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G++P Y + + LCK ++ A + P TY+ L+ G + G+
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A DEM+ + ++ +N + A+ G + +A M++EMR G PDA +++I
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C D F +LD M + P + TY +I L K +++EA L ++ + G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +NA++ HC ++ A +L+ M V+PD TYN +++ R G+ + A
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ + M++RG P +Y+ ++ G K+G +++A + + M+ G P
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGY-SKRGDMKDAFRVRDEMMTTGFDP 564
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M I+ S+Y + +++ LCK +K A +F + + P V TY+ ++ G G+
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
AR +F M ++ D +NS + +CK G ++EA G++ +M G P+A +Y+
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326
Query: 120 FIHAFCEAND--------------------------IHSVF---------RVLDSMKRYN 144
I +C D IH++F ++ M+
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++P+ T+N +I C+ + A+ LLDEM+ +G P +Y +++ R + A
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L +++ +E ++PD +N ++ G DRA ++ + M+ P TY+ ++ G
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C ++GK+EEA + + M GI P
Sbjct: 507 C-REGKVEEARQLLDEMKRRGIKP 529
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 10/298 (3%)
Query: 10 IYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFD 68
I+DL L+ A C+ K A + F K + F P ++T + ++ + A L+
Sbjct: 148 IFDL--LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
EM + N ++ +CK G + +A + M ++G +P+ +Y+ IH C
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ +MK L P+ +TYN I LCK ++EEA L+ +M+E G P+ +YN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
A++ +C++ +++ A M + +M TYN+ + L GR A + + M ++
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML--RNRL 300
G P T++++++G C + G + A + MV +GI P Y+S + +L RNR+
Sbjct: 386 GMMPDAVTHNILINGYC-RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ GI S+ + +HAL + A + + P T++IL+ G G+
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L DEM+ + ++ + SL+ + K + EA + +++ G PD ++
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +I F++L M ++P+ TYN +++ C+ KVEEA QLLDEM RG
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN +++ + R ++ A R+ M P TYN +++ L + + A
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
E+ + M +G P STY ++ +
Sbjct: 587 ELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T + +LVR ++ + +EA + F + E+ +I N +L K A +
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
EM + ++++I I+ C+ + + M+ + PNV TYN II C
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
K + A + M ++G PD ++YN+ ++ C + A LI +M + ++P+ TY
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ G D+A + M +G S+ TY++ +H L +G++ +A + M
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF-MEGRMGDADNMIKEMR 383
Query: 283 DEGIPPYSSTVEMLRN 298
++G+ P + T +L N
Sbjct: 384 EKGMMPDAVTHNILIN 399
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + L+ C+ V+ A Q D K P +Y+ L+ G G++ +A
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAF 551
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ DEM+ IL +N+L++ +CK + A +L+EM S G PD +Y I A
Sbjct: 552 RVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Query: 125 CEANDI 130
+D+
Sbjct: 612 ETVDDL 617
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
EFG+ P++ L+ CK +V +A F + P TYS+L+ G G
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E ++++ M + A+N L+ C G +D+A + EMR G +Y+I I
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C +++ + + L PN+ TYN +I C K++ A +L +++ G +
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN ++A + + AL L+ M + + P + TY +++ R+ ++A E+
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEM 425
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
MEK G P V TYSV++HGLC G ++EA K F+ + + + P S
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGLC-VHGNMKEASKLFKSLGEMHLQPNS 473
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 154/319 (48%), Gaps = 1/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P + L+ L + + A F+ K + ++ I+++G + G
Sbjct: 115 MIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYF 174
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ +L + E +++ + +L++ CK GN+ A + +M +G P+ +YS+
Sbjct: 175 VKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVL 234
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++ F + F++ ++MKR +VPN + YNC+I + C V++A+++ EM E+G
Sbjct: 235 MNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGI 294
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+YN ++ C + A++L+ ++ K + P+ TYN+++ VG+ D A
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVR 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ ++ G P++ TY+ ++ G K + L A + M + I P T +L +
Sbjct: 355 LFNQLKSSGLSPTLVTYNTLIAGYSKVE-NLAGALDLVKEMEERCIAPSKVTYTILIDAF 413
Query: 301 VGLGFLDIIEILADKMERS 319
L + + + ME+S
Sbjct: 414 ARLNYTEKACEMHSLMEKS 432
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 8/266 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E GI + + L+ LC+ K VK+ H+ K +P + TY+IL+ G D
Sbjct: 289 MREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV---NKVGLSPNIVTYNILINGFCD 345
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
VG++ A +LF+++ ++ +N+L+ K N+ A +++EM P +
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I I AF N + M++ LVP+V+TY+ +I LC + ++EA +L +
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
E P+ YN ++ +C ALRL+ M ++P+ ++ + LL R ++
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWK 525
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVH 262
A + M G PSVS Y MVH
Sbjct: 526 EAELLLGQMINSGLKPSVSLYK-MVH 550
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
+ G+ P+I + L++ C + A + F+ K +PT+ TY+ L+ G V L+
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A L EM ER + + L++A + ++A M M G PD ++YS+ I
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C ++ ++ S+ +L PN YN +I CK A +LL+EM+ G
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P+ S+ + + C + A L+ +M + P Y MV K+
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ I+ + + AL + M E +P +T+N ++ LL+R FD+A ++ ++
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + S + +M+ G C + G + + M+ + G+ P
Sbjct: 152 SKVVLDAYS-FGIMIKGCC-EAGYFVKGFRLLAMLEEFGLSP 191
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P I L+ LC VK + F D +Y L+ GL +G+
Sbjct: 110 ILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQ 169
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +L ++ C D++ +N++++ +CK + +A + EM P+ +Y+
Sbjct: 170 TGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTS 229
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + F +L+ M N+ PNV T+N ++ LCK K+ EA L+ M++ G
Sbjct: 230 LIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEG 289
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YNA++ + E A + M + V D H+Y++++ L ++ D A
Sbjct: 290 VGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAM 349
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+++E M P V YS ++ GLC K G++ A KY + M D G PP Y+S ++
Sbjct: 350 DLFEGMRNENVIPDVVAYSSLIDGLC-KSGRINSALKYVDEMHDRGQPPNVITYTSLIDA 408
Query: 296 L 296
L
Sbjct: 409 L 409
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 161/328 (49%), Gaps = 37/328 (11%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P + + ++ LCK K V+ A + + + P V TY+ L+ G VG+L +A
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFG 245
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L +EM+ + ++ N+L++ +CK G + EA ++ M G PD F+Y+ + +
Sbjct: 246 LLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYF 305
Query: 126 ---EANDIHSVFRVL--------------------------------DSMKRYNLVPNVF 150
EA +VF ++ + M+ N++P+V
Sbjct: 306 LVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVV 365
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
Y+ +I LCK+ ++ A + +DEM +RG P+ +Y +++ C +V+ A+ L+ ++
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + + +TYN+++ L + GR A +V++ + +G V TYS+M++GLCK+
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKES-L 484
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+EA M D+G P + E + N
Sbjct: 485 FDEALTLLSKMEDKGCVPDAIAYETIIN 512
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 41/329 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P I ++L +L K KH + F + H T +IL+ + +++ A +
Sbjct: 47 PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F ++L+ DI+ + +L+ +C G + E+ + S G + D SY I+ C+
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE----------------------- 163
R+L ++ P+V YN II LCK++
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226
Query: 164 ------------KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
++++A+ LL+EM+ + NP+ ++N ++ C ++ A L+ M
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
KE V PD TYN ++ V +A V+ M + G V +YSVM+ GL K K L
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMK-ML 345
Query: 272 EEACKYFEMMVDEGIPP----YSSTVEML 296
+EA FE M +E + P YSS ++ L
Sbjct: 346 DEAMDLFEGMRNENVIPDVVAYSSLIDGL 374
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 146/307 (47%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
+V GIK L++ LCK A + + E P V Y+ ++ GL
Sbjct: 145 LVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L+ EM E++ +++ + SL+ C G +D+A G+L EM P+ +++
Sbjct: 205 VRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNT 264
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + ++ M + + P+VFTYN ++ ++ +A + + M + G
Sbjct: 265 LVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMG 324
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D SY+ +++ ++ A+ L M ENV+PD Y+ ++ L + GR + A
Sbjct: 325 VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSAL 384
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M RG P+V TY+ ++ LCK ++++A + + D+GI T +L +
Sbjct: 385 KYVDEMHDRGQPPNVITYTSLIDALCKSH-QVDKAIALLKKIKDQGIQANMYTYNILVDG 443
Query: 300 LVGLGFL 306
L G L
Sbjct: 444 LCKDGRL 450
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A F+ ML + P I+ +L ++ K + + + M G + + + +I
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+++C I+S F V + + P++ TY +IR LC N +V+E+ D ++ +G
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D SY ++ C + ALRL+ ++ E PD YN ++ L + A
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M ++ +P+V TY+ +++G C G+L++A MV + + P T L +
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFC-IVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268
Query: 300 L 300
L
Sbjct: 269 L 269
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ ++ ++ L K K + A F+ ++E P V YS L+ GL G
Sbjct: 320 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEA------------------------------- 88
++ A K DEM +R P +++ + SL++A
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439
Query: 89 ----MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+CK G + +A + +++ G D +YSI I+ C+ + +L M+
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
VP+ Y II + + ++A +LL EMI+
Sbjct: 500 CVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 85/203 (41%), Gaps = 3/203 (1%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
N+++A M + P + + + + V + M+ + + N T N
Sbjct: 29 NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I C ++ A+ + ++++ G PD +Y ++ C +V +L R+ +
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK---GK 270
+ D +Y ++ L ++G+ A + +E P V Y+ ++ GLCK K
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208
Query: 271 LEEACKYFEMMVDEGIPPYSSTV 293
+ C+ FE V + Y+S +
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLI 231
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 162/327 (49%), Gaps = 5/327 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + L+ + + K + F+ K F P ++YSIL+ L G
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E +L+ M ++ C +D A+N++++ CK+G +++A+ +L EM+++G P +Y
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + + + + K + N Y+ +I K +V+EAY +++EM+++G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N +L E+N AL M P++ TY +++ L +V +F++A
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPPYSSTVEMLRN 298
W+ M+K+G P+ TY+ M+ GL K G + +A FE GIP +S M+
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGL-AKSGNVAQASSLFERFRASGGIPDSASYNAMIEG 699
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQ 325
+ LD ++ + R C+I
Sbjct: 700 LSIANRALDAYQLFEET--RLKGCSIH 724
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 38/339 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE---- 59
G P+ Y +L+ + K + + A +H +F P Y+ L+ L +VGE
Sbjct: 21 GFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRM 80
Query: 60 -------------------------------LSEARKLFDEMLERKCPVDILAHNSLLEA 88
+ A L DEM DI+ +N ++
Sbjct: 81 LALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDC 140
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
K G +D A EM++ G PD +Y+ + C+AN + + + M++ VP
Sbjct: 141 FGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPC 200
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ YN +I K +EAY LL+ +G P +YN IL + + + ALR+
Sbjct: 201 AYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFE 260
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M K + MP+ TYN+++ +L + G + A +V ++M++ G +P+V T ++M+ LCK +
Sbjct: 261 EM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQ 319
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
KL+EAC FE M + P +T L + L G +D
Sbjct: 320 -KLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVD 357
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 153/336 (45%), Gaps = 37/336 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M E G+ P++ ++ ++ LCK + + A F+ ++ +P T+ L+ GLG G
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGR 355
Query: 60 LSEA-----------------------------------RKLFDEMLERKCPVDILAHNS 84
+ +A K++ EM+ C D++ N+
Sbjct: 356 VDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNT 415
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ + KAG ++ + E+++ G PD SYSI IH+ +A + + +MK
Sbjct: 416 YMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
V + YN +I CK+ KV +AYQLL+EM G +P +Y +++ ++ A
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAY 535
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L + ++ Y+ ++ +VGR D A V E M ++G P+V T++ ++ GL
Sbjct: 536 MLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGL 595
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
K + ++ EA F+ M D P T +L N L
Sbjct: 596 VKAE-EINEALVCFQSMKDLKCTPNQITYCILINGL 630
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K+ A + F+ K + P + TY+I++ L G + A
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAF 290
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ D M E ++ N +++ +CKA +DEA + M PD ++ I
Sbjct: 291 KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGL 350
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + +R+ + M + +PNV Y +IR K ++ E+ +++ EM+ G +PD
Sbjct: 351 GKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E L + +PD +Y++++ LV+ G E++ +
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+ +G Y+ ++ G C K GK+ +A + E M G P Y S V+ L
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFC-KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGL 525
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G+ P++Y + LL L K + + A F + K + TP TY IL+ GL V +
Sbjct: 576 MMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRK 635
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A + EM ++ + + + +++ + K+GN+ +A + R+ G PD+ SY+
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNA 695
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
I AN +++ + + + T ++ L K E +E+A
Sbjct: 696 MIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
M + N D +L EM G P ++ + + ++ + F +L M+ + P
Sbjct: 1 MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
Y +I L + + + L ++M E G + ++ V+ AL L+
Sbjct: 61 FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M D YN+ + +VG+ D A + + M+ G P TY+ M+ LCK
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180
Query: 269 GKLEEACKYFEMM 281
+L+EA + FE M
Sbjct: 181 -RLDEAVEIFEQM 192
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++L M P +T ++ K+ K+ EA+ LL M P +Y ++
Sbjct: 12 QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ E + L L +M + + H ++++ R GR D A + + M+ F +
Sbjct: 72 SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
Y+V + K GK++ A K+F M G+ P T + L LD + +
Sbjct: 132 VLYNVCIDCF-GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190
Query: 315 KMERS 319
+ME++
Sbjct: 191 QMEQN 195
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G P + + L+H LCK + A F K PTV +++ L+ G G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + +L M+E + D+ ++ L+ +CK G +D+A+ + EM G P+ +++
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + M R + P+V TYN +I LCK + EA +L+ EM +RG
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C ++ AL + M KE + D + ++ R G+ A
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
M + G P +TY++++HG C KKG ++ K + M +G P T +L N
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFC-KKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514
Query: 300 LVGLGFLDIIEILADKM 316
L G + +L D M
Sbjct: 515 LCKQGQMKNANMLLDAM 531
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 150/297 (50%), Gaps = 4/297 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQF--FDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G++P++ + L++ CK ++ + F F P V TYS+L+ GL G+L +
Sbjct: 255 GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF-PDVFTYSVLINGLCKEGQLDD 313
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A KLF EM +R + + +L+ C G D + ++M G +PD +Y+ I+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLIN 373
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ D+ +++ M + L P+ FTY +I CK +E A ++ EM++ G
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++ A+++ C +V A R + M + + PD TY MV+ + G ++
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M+ G P V TY+V+++GLC K+G+++ A + M++ G+ P T +L R
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLC-KQGQMKNANMLLDAMLNLGVVPDDITYNILLER 549
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 124/226 (54%), Gaps = 1/226 (0%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S A ++E+L+ P D+ N L+ +CK I+EA + E+ G P S++
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ +C++ ++ FR+ M + P+VFTY+ +I LCK ++++A +L EM +RG
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P++ ++ ++ HC ++ + + +M ++ V PD TYN ++ L +VG A +
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M +RG P TY++++ G C K+G LE A + + MV EGI
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCC-KEGDLESALEIRKEMVKEGI 431
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 23/308 (7%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFF---------DNAKHEFTPTVK---------TYSIL 50
SI+ + H LC K + A ++A FT ++ +S+L
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNS--LLEAMCKAGNIDEAHGMLREMRSI 108
+ D G S+A + F L RK + I H+ L + + K A E+
Sbjct: 162 MNAYTDSGYFSDAIQCFR--LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD +++ +H C+ + I+ + + + L P V ++N +I CK+ +++
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++L M+E PD ++Y+ ++ C +++ A +L M ++P+ T+ ++
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
GR D E+++ M ++G P V TY+ +++GLC K G L EA K M G+ P
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC-KVGDLREAKKLVIEMTQRGLKP 398
Query: 289 YSSTVEML 296
T ML
Sbjct: 399 DKFTYTML 406
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 24/290 (8%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
+ +H F ++ +Y + L LSEA+ L ++ RK + +S+ ++ +A
Sbjct: 94 STQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKN---SASSVFTSVLEARG 150
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI----HSVFRVLDSMKRYNLV---- 146
+++ + + + + FS +I +++ HS + D + + NL
Sbjct: 151 THQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAW 210
Query: 147 ------------PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
P+V +N ++ +LCK K+ EA L E+ +RG P S+N ++ +
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ RL M + V PD TY++++ L + G+ D A +++ M RG P+
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
T++ +++G C G+ + + ++ M+ +G+ P T L N L +G
Sbjct: 331 VTFTTLINGHC-VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVG 379
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ GI+ L+ C+ V A + + + P TY++++ G G+
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD 485
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ KL EM ++ +N LL +CK G + A+ +L M ++G PD +Y+I
Sbjct: 486 VKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNI 545
Query: 120 FIHAFCEA 127
+ +A
Sbjct: 546 LLERTLQA 553
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 1/309 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG+ ++ LL LCK + VK A F K P +++ LV G L
Sbjct: 258 MDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARML 317
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EAR+ EM + + L+EA C + G+L EM + G P+ +Y+I
Sbjct: 318 KEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIV 377
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A D +K+ + YNC+I LC+ ++++A +++EM G
Sbjct: 378 MHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGI 437
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P+ ++N +++ CD + AL+L+ +M +++ PD TY +LKL R
Sbjct: 438 SPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLF 497
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M ++ P STY+++V LC + G+L ++C + E MV +G P +T +++ +L
Sbjct: 498 LICHMFRKDITPDFSTYTLLVCWLC-RNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEKL 556
Query: 301 VGLGFLDII 309
+ L +
Sbjct: 557 KNMHMLSAV 565
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 17/246 (6%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
VDIL + MC G++ +M IG + + + C AN
Sbjct: 204 VDILGKFKQFDLMC---------GLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDA 254
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE---AYQLLDEMIERGANPDEWSYNAILAY 193
M R+ + + N ++ LCK V+ A+Q L I PDE S+N ++
Sbjct: 255 FHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIP----PDESSFNTLVHG 310
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + A + M + P TY +++ F + + M +G P+
Sbjct: 311 WCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPN 370
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
+ TY++++H L K G+ +EA F+ + +G +S L L G L +
Sbjct: 371 IITYTIVMHAL-GKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVV 429
Query: 314 DKMERS 319
++M R+
Sbjct: 430 EEMHRT 435
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 159/320 (49%), Gaps = 4/320 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G ++ + L+ C+ H+ A + P TY+ L+R L D G +++A
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLI--GSMPVAPDAYTYTPLIRVLCDRGRVADAL 162
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D+ML R C +++ + LLEAMCK ++A +L EMR+ G P+ +Y++ I+
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + +L+ + Y P+ +Y +++ LC +++ ++ +L EM+E+ P+E
Sbjct: 223 CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 282
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++ ++ + C V A++++ +MT+ + N+V+ + + GR D A + +
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN 342
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M G P +Y+ ++ GLC+ + + +A + + MV PP T L G
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAE-RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKG 401
Query: 305 FLDIIEILADKMERSTSCTI 324
++ +L ++M+ CT+
Sbjct: 402 LIEQAIMLIEQMQEH-GCTV 420
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +P++ LL A+CK + A D + + TP + TY++++ G+ G
Sbjct: 168 MLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 227
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +AR L + + C D +++ +LL+ +C + D+ + EM P+ ++ +
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + +VL M + N N +I +CK +V++A++ L+ M G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD SY +L C N A L+ M + N P+ T+N + +L + G ++A
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 407
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ E M++ G V TY+ +V+G C +G ++ A + F M
Sbjct: 408 MLIEQMQEHGCTVGVVTYNALVNGFC-VQGHIDSALELFRSM 448
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
+ +G +P LL LC K + F + + P T+ +L+R G
Sbjct: 238 LFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGM 297
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +M E +C + N ++ ++CK G +D+A L M S G PD SY+
Sbjct: 298 VERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTT 357
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + +L M R N PN T+N I LC+ +E+A L+++M E G
Sbjct: 358 VLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG 417
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+YNA++ C + ++ AL L M + P+ TY +L L R D A
Sbjct: 418 CTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAA 474
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+ M R P+V T++V+V+ C+K G L+EA + E M++ G P
Sbjct: 475 ELVAEMLHRDCPPNVVTFNVLVNFFCQK-GFLDEAIELVEQMMEHGCTP 522
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V + L+R L G S+A ++ PVD+ A+N+L+ C+ G++D A
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR-- 130
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
R + S+ PDA++Y+ I C+ + +LD M R PNV TY ++ +CK
Sbjct: 131 -RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N E+A +LDEM +G P+ +YN I+ C V+ A L+ R+ PD +
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y +LK L R+D E++ M ++ P+ T+ +++ C + G +E A + + M
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFC-RGGMVERAIQVLQQM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ ++ ++ N + G +D
Sbjct: 309 TEHECATNTTLCNIVINSICKQGRVD 334
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV P+ + + LC++ ++ A + + H T V TY+ LV G G
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +LF M C + + + +LL +C A +D A ++ EM P+ ++++
Sbjct: 438 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC+ + +++ M + PN+ TYN + + K+ E+A +LL ++ +G
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++++I+ V A+++ + P YN +L L + D A
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAI 614
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M G P+ STY +++ GL ++G L+EA M+ G+
Sbjct: 615 DFLAYMVSNGCMPNESTYIILIEGL-AREGLLKEAQDLLSMLCSRGV 660
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G PD + + I C RVL + + +VF YN ++ C+ ++ A
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
+L+ M PD ++Y ++ CDR V AL L+ M + P+ TY ++L+
Sbjct: 130 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + F++A V + M +G P++ TY+V+++G+C ++G++++A + G P
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMC-REGRVDDARDLLNRLFSYGCQP 245
Query: 289 YS-STVEMLRNRLVGLGFLDIIEILADKMERS 319
+ S +L+ + D+ E+ A+ ME++
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 277
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 129 DIHSVFRVLD-SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
D+ R+++ S R P+V+ +IR LC+ + +A ++L G+ D ++Y
Sbjct: 54 DLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAY 113
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N ++A +C ++ A RLI M V PD +TY ++++L GR A + + M +
Sbjct: 114 NTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 170
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
RG P+V TY+V++ +CK G E+A + M +G P T ++ N + G +D
Sbjct: 171 RGCQPNVVTYTVLLEAMCKNSG-FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G++P +L +LC+ ++ + + H + +P V +Y+ ++ G
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGG-CSPNVVSYNTVIHGFFR 239
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
GE+S+A LF EM+++ D++ ++S ++A+CKA +D+A +LR+M S G EPD +
Sbjct: 240 EGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVT 299
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + + M R L+P++FT N + LCK+ K +EA + D M
Sbjct: 300 YNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMA 359
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G PD +Y+ +L + V L L M ++ D YN+++ + G D
Sbjct: 360 AKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMD 419
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A ++ M++RG P TY ++ + G+L +A F M+ G+ P Y+S
Sbjct: 420 EAMLIFTQMQERGVMPDAWTYGTVIAAF-SRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478
Query: 293 VE 294
++
Sbjct: 479 IQ 480
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 9/293 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK----VAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M++ G+ P + + ALCK + + V Q N F P TY+ ++ G
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG---FEPDKVTYNCMIHGYSI 309
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+G+ E +F EM R DI NS + ++CK G EA M + G +PD +
Sbjct: 310 LGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVT 369
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS+ +H + + + + +SM+ +V + YN +I K ++EA + +M
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
ERG PD W+Y ++A + A+ +M + PD YN +++ G
Sbjct: 430 ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489
Query: 237 RATEVWESMEKRGF-YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A E+ M RG P+ ++ +++ LC K+G++ EA F++++ G P
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLC-KEGRVVEAQDIFDLVIHIGERP 541
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 15/323 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKT--YSILVRGLGDVG 58
M+ G+KP + L+ C ++ A + P T ++ ++ L G
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA+ +FD ++ D++ NSL++ G +++A G+L M S+G EPD +YS
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +C I + M + P TY I+ L + + A ++ EMIE
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G D + IL C + A+ L ++ NV + N ++ + +V + + A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E+++S+ G P+ STY VM+ L K+G +EEA F +M G P S +L N
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLL-KEGSVEEADNMFSLMEKSGCAPSS---RLLNN 758
Query: 299 RLVGLGFLDIIEILADKMERSTS 321
II +L +K E S +
Sbjct: 759 ---------IIRVLLEKGEISKA 772
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA-HG 100
PTV TY+IL+ + LF L+ D++ N LL+ +C A D+A +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRK 158
+L M +G EPD SYS + + CE + +L +M K PNV +YN +I
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+ +V +A L EM+++G PD +Y++ + C ++ A ++ +M PD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+ TYN ++ +G++ ++ M +RG P + T + + LC K GK +EA ++F
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLC-KHGKSKEAAEFF 355
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ M +G P T +L + G++ + L + ME
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSME 394
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+P + LL C+ + F + PT TY I++ GL + G
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A+K+ EM+E +DI +L +C+ DEA + +++ ++ + + +
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + DS+ LVPN TY +I L K VEEA + M + G
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P N I+ ++ E++ A ++++ + + + T +++L L R G++
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQI 808
Query: 240 EVWESM 245
+ +M
Sbjct: 809 KSLPAM 814
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 18/248 (7%)
Query: 58 GELS--EARKLFDEMLERKCPVDILAHNSLLEAMCKAGN-----------IDEAHGMLRE 104
G LS + LFDE+L + PV A N L A+ +A + + + + RE
Sbjct: 49 GTLSTEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALFNRICRE 108
Query: 105 -MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
R A P +Y+I + C A+ F + + L +V N +++ LC +
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAK 168
Query: 164 KVEEAYQ-LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN--VMPDRH 220
+ ++A LL M E G PD SY+ +L C+ + AL L+ M K++ P+
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+YN V+ R G +A ++ M ++G P V TYS + LCK + +++A
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARA-MDKAELVLRQ 287
Query: 281 MVDEGIPP 288
M+ G P
Sbjct: 288 MISNGFEP 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 1/240 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V TYS L+ G G + + LF EML + + + +L + G A M
Sbjct: 576 PDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKM 635
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM G D + I + C N + + N+ N+ N +I + K
Sbjct: 636 CHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYK 695
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K EEA +L D + G P+ +Y ++ V A + + M K P
Sbjct: 696 VRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRL 755
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N ++++L+ G +A ++ + ST S+M+ L +KGK E K M
Sbjct: 756 LNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLS-LFSRKGKYREQIKSLPAM 814
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSEA 63
G +P L+ LC + V A F D + + +Y L+ G+ +G+ A
Sbjct: 135 GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGA 194
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ R ++ +N++++A+CK + EA+G+ EM + G + SY+I I
Sbjct: 195 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKG 254
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M + N+VP + TY ++ LCK+ ++ ++L+DEM +RG D
Sbjct: 255 FCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPAD 314
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C ++ A+ L +M DR T+ ++L L + GR A EV++
Sbjct: 315 VITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQ 372
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + + V Y+VM++G C K+G LEEA M D G P + T E++ N L
Sbjct: 373 DLLTKEYDLDVYPYNVMINGYC-KQGLLEEALTMRSKMEDNGCIPSAVTFEIIINAL 428
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P + +++L + KH A + + P T +IL+ +G+++ +
Sbjct: 68 PPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSV 127
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
++L+R + +L++ +C G +++A ++ + G + D SY I+ C+
Sbjct: 128 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 187
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D +++ + PNV YN II LCK + V EAY L EM +G + + S
Sbjct: 188 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVS 247
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ C V+ AL L M ++N++P TY ++ L + GR E+ + M
Sbjct: 248 YNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMH 307
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
RG V TY+ ++ GLC K G L+ A F M D
Sbjct: 308 DRGIPADVITYNSLIDGLC-KNGHLDRAIALFNKMKD 343
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ + +A F+ ML + ++ N +L++ + A + + G +PD F+
Sbjct: 48 IQNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFT 107
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+I ++ FC I+ F VL + + P+ T+ +I+ LC +V +A D+++
Sbjct: 108 LNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 167
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G D+ SY ++ C + A++L+ ++ P+ YN ++ L +
Sbjct: 168 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 227
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ M +G +V +Y++M+ G CK K ++EA F+ M + + P T L
Sbjct: 228 EAYGLFSEMTAKGISANVVSYNIMIKGFCKSK-MVDEALNLFKEMHQKNMVPTIVTYGSL 286
Query: 297 RNRLVGLGFLDIIEILADKM 316
+ L G + + L D+M
Sbjct: 287 MDGLCKSGRISYVWELIDEM 306
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 118/245 (48%), Gaps = 3/245 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP++ + ++ ALCK + V A+ F + + V +Y+I+++G + EA
Sbjct: 207 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALN 266
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF EM ++ I+ + SL++ +CK+G I ++ EM G D +Y+ I C
Sbjct: 267 LFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLC 326
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + + + MK + T+ ++ LCK ++++A ++ +++ + + D +
Sbjct: 327 KNGHLDRAIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVY 384
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
YN ++ +C + + AL + ++M +P T+ +++ L D+A ++ M
Sbjct: 385 PYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444
Query: 246 EKRGF 250
RG
Sbjct: 445 IARGL 449
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 9/220 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M GI ++ + ++ CK K V A F + PT+ TY L+ GL G
Sbjct: 236 MTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGR 295
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S +L DEM +R P D++ +NSL++ +CK G++D A + +M+ D +++I
Sbjct: 296 ISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKD--XRFDRLTFTI 353
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C+ D VF+ L + K Y+L +V+ YN +I CK +EEA + +M
Sbjct: 354 LLDGLCKGGRLKDAQEVFQDLLT-KEYDL--DVYPYNVMINGYCKQGLLEEALTMRSKME 410
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ G P ++ I+ ++ E + A +L+ M ++
Sbjct: 411 DNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGLL 450
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 1/277 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP V ++ ++ + S A L + + D N L+ C G I+
Sbjct: 67 TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFS 126
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L ++ G +P +++ I C ++ D + + + +Y +I +C
Sbjct: 127 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 186
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K A +L+ ++ R P+ YN I+ C V+ A L + MT + + +
Sbjct: 187 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVV 246
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+YN+++K + D A +++ M ++ P++ TY ++ GLC K G++ + +
Sbjct: 247 SYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLC-KSGRISYVWELIDE 305
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
M D GIP T L + L G LD L +KM+
Sbjct: 306 MHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMK 342
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 154/324 (47%), Gaps = 5/324 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
+V G KP + QLL+ LCK +K A + + + P +Y+ LV L G
Sbjct: 88 IVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGN 147
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L ++M E CP + + +NSL+ +CK GN++++ +L ++ G P+ F++S
Sbjct: 148 IGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSF 207
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A + + ++LD + PN+ +YN ++ LCK + EEA Q ++ +G
Sbjct: 208 LLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKG 267
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ S N IL C A L+ M E P TYN+++ L GR A
Sbjct: 268 FNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAF 327
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+V + M + F PS +T++ ++ LC K+GK + K + M+ P T +
Sbjct: 328 QVLDEMMRASFQPSAATFNPIISHLC-KEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVL 386
Query: 300 LVGLGF---LDIIEILADKMERST 320
G II+ L +K ST
Sbjct: 387 CEGGRVQRAFSIIQSLGNKQNSST 410
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 36/327 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ + LL A K + V A + D P + +Y++L+ GL G EA
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ F ++ + ++++ N +L ++C G +EA+ ++ EM S P +Y+I I +
Sbjct: 257 IQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGS 316
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
I F+VLD M R + P+ T+N II LCK K + + LD+MI NP+
Sbjct: 317 LASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPN 376
Query: 184 EWSYNAI----------------------------------LAYHCDRAEVNMALRLITR 209
+ ++NAI ++ C + A +L+
Sbjct: 377 DGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYE 436
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + +PD +TY+ +++ L G D A E++ +E+ + P + ++ ++ G CK G
Sbjct: 437 MIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKS-G 495
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + + + FEMM+ +G P +T +L
Sbjct: 496 RTDLSLEIFEMMILKGYTPNETTYTIL 522
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 38/342 (11%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGEL 60
+E GI P L++ LCKR ++ A Q + + PT TY+ LVRGL G L
Sbjct: 124 IESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNL 183
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+++ +L D+++ + + H+ LLEA K +DEA +L + + G +P+ SY++
Sbjct: 184 NQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVL 243
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC-------KNE---------- 163
+ C+ + + PNV + N I+R LC NE
Sbjct: 244 LTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEER 303
Query: 164 ------------------KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+++ A+Q+LDEM+ P ++N I+++ C + ++ ++
Sbjct: 304 SPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVK 363
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ +M P+ T+N + +L GR RA + +S+ + + Y ++ LC
Sbjct: 364 CLDQMIHHCCNPNDGTFNAI-AVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLC 422
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+KG A + M+ G P T L L G LD
Sbjct: 423 -RKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLD 463
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 35/301 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP++ + LL LCK + A QFF D F P V + +I++R L G EA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEA 291
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + ++ +N L+ ++ G I A +L EM +P A +++ I
Sbjct: 292 NELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISH 351
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI---------------------------- 155
C+ V + LD M + PN T+N I
Sbjct: 352 LCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTH 411
Query: 156 ------IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
I LC+ A+QLL EMI+ G PD ++Y++++ C ++ AL +
Sbjct: 412 DFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRL 471
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+ + + P +N ++ + GR D + E++E M +G+ P+ +TY+++V G+ ++
Sbjct: 472 LEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEE 531
Query: 270 K 270
K
Sbjct: 532 K 532
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ + L+ +L ++ A Q D + F P+ T++ ++ L G+ K
Sbjct: 305 PSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKC 364
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF---IHA 123
D+M+ C + N++ +C+ G + A +++ S+G + ++ ++ + I +
Sbjct: 365 LDQMIHHCCNPNDGTFNAI-AVLCEGGRVQRAFSIIQ---SLGNKQNSSTHDFYRGVISS 420
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + F++L M + VP+ +TY+ +IR LC ++EA ++ + E P
Sbjct: 421 LCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPI 480
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++NA++ C +++L + M + P+ TY ++++ + + A EV +
Sbjct: 481 LGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLK 540
Query: 244 SMEKR 248
+ R
Sbjct: 541 ELYIR 545
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
++ F L+ + R P+V ++ LCK+ K+++A ++++ IE G PD SY
Sbjct: 78 LNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTF 137
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C R + A++L+ +M + + TYN +++ L + G +++ ++ + + ++G
Sbjct: 138 LVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKG 197
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+ T+S ++ K++G ++EA K + ++ +G P
Sbjct: 198 LVPNEFTHSFLLEAAYKERG-VDEAMKLLDGIIAKGGKP 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+ +PS + ++ LCK + + D H P T++ + L + G
Sbjct: 333 MMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAV-LCEGGR 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + ++ + ++ ++C+ GN A +L EM G PD ++YS
Sbjct: 392 VQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSS 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + ++ + P + +N +I CK+ + + + ++ + MI +G
Sbjct: 452 LIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKG 511
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+E +Y ++ E +A ++ + VM
Sbjct: 512 YTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVM 548
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++ +A+ L+ ++ +G PD +L C ++ A R++ + ++PD +Y
Sbjct: 77 RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ L + G A ++ E ME+ G + TY+ +V GLC K G L ++ + + ++
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLC-KHGNLNQSLQLLDKLMR 195
Query: 284 EGIPP 288
+G+ P
Sbjct: 196 KGLVP 200
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 2/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M G P I + L+ LCK V ++ F K +F P V TYS L+ G +
Sbjct: 36 MTATGCLPDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDR 95
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A LFD+ML++ D++ +L+E C AG +D+A +L E+ + PD ++Y+
Sbjct: 96 INMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTS 155
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + RVL M + PNV Y +I C K AY+LL+EM+ G
Sbjct: 156 LVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNG 215
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +Y +++ C ++ A +++ R+ + EN D Y +++ L R GR A
Sbjct: 216 VQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAA 275
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
E+ E++++ G P Y ++ G K K +E ++ E
Sbjct: 276 LELLEAIKQSGTPPRHDIYVALIRGEMTLSRKGRPNAKVYEAVIQE 321
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
+++ +NSL+ C +D ++ EM + G PD +Y+ I C+ + V R+
Sbjct: 9 NMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLF 68
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
MK P+V TY+C+I CK +++ A L D+M+++ A PD ++ ++ +C+
Sbjct: 69 GEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNA 128
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
V+ A RL+ + + PD +TY ++ +V R A V + M K P+V Y
Sbjct: 129 GLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIY 188
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ ++ C GK A K E MV G+ P + T L G G L+ + +++E
Sbjct: 189 TALIDAFCSA-GKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLE 247
Query: 318 RSTSC 322
R+ +C
Sbjct: 248 RNENC 252
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + TY+ L+ G + L +EM C DI +N+L++ +CK G + E + +
Sbjct: 8 PNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRL 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM++ PD +YS I FC+ + I+ + D M + +P+V T+ ++ C
Sbjct: 68 FGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCN 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V++A +LL+E++ +PD ++Y +++ C + A R++ RM K P+
Sbjct: 128 AGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVI 187
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
Y ++ G+ A ++ E M G P+ TY ++ G C G LEEA K E
Sbjct: 188 YTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFC-GTGDLEEAHKMLE 244
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P +Y L+ CK K + AH+ AK E P V Y+ L+ G+ + A KL
Sbjct: 148 PDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKL 207
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHAFC 125
+EM+ + + + SL+ C G+++EAH ML + R+ + D F+Y + + C
Sbjct: 208 LEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLC 267
Query: 126 EANDIHSVFRVLDSMK------RYNLV---------------PNVFTYNCIIRKLCKNEK 164
+ + +L+++K R+++ PN Y +I++L + +
Sbjct: 268 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGEMTLSRKGRPNAKVYEAVIQELAREGR 327
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
E+A L DE++ A+ + I HC
Sbjct: 328 HEKANALSDELLGNKASKTRF---VITNPHC 355
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M + + PN+ TYN +I C V+ L++EM G PD +YN ++ C
Sbjct: 1 MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGR 60
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V RL M + PD TY+ ++ ++ R + A +++ M K+ P V T+
Sbjct: 61 VPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPT 120
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+V G C G +++A + E +V P Y+S V+
Sbjct: 121 LVEGYC-NAGLVDDAERLLEEIVASDCSPDVYTYTSLVD 158
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MV G+KP++Y L+ LCK + A + F + P V TY++++ G G
Sbjct: 277 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 336
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ A L M+E+ + + +L+ CK G+ D A ++ +M+ G P+ ++Y+
Sbjct: 337 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 396
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+ I ++VL L + TY +I + CK + A L D M+E
Sbjct: 397 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 456
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +Y ++++ +C + ++ + + + ++P + TY ++ +VGR A
Sbjct: 457 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 516
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E M + G + TY ++ GLCK+ +LEEA +E M+D+ + P
Sbjct: 517 LRVFERMVQNGCFADSITYGALISGLCKES-RLEEAKALYEGMLDKRLVP 565
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 3/296 (1%)
Query: 29 AHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
A + FD + P +++ LV G++ E L M +D ++
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
++C+ G + R M G P+ +Y+ +I C+ + F VL+ M L P
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 284
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRL 206
NV+T+ +I LCK E A++L ++I+ + P+ +Y ++ +C ++ A L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ RM ++ + P+ +TY ++ + G FDRA E+ M++ GF P++ TY+ ++ G CK
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
K GK++EA K M +G+ T +L G + L D+M + C
Sbjct: 405 K-GKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 459
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
+V G+ G L EA + EM P+ + N +L + G+ A + M G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD S+ + C + V +L +M RY + T ++R LC+ + ++
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ M+E G P+ +Y A + C R V A ++ M + P+ +T+ ++ L
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Query: 230 VRVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G +RA ++ + K Y P+V TY+VM+ G C ++GKL A MV++G+ P
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYC-REGKLARAEMLLVRMVEQGLKP 355
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++T L G D L +KM++
Sbjct: 356 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 385
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSE 62
GI P Y L+ CK ++ A + FD + E P+ Y+ L+ G D G+L
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDV 237
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + ++M++R + + +N L+ A+ G +A+ +L EM+ G PD F+Y+I I+
Sbjct: 238 ALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILIN 297
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ + V + M R + TY +I + +V+E +L +++G P
Sbjct: 298 GYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRP 357
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D YNA++ HC ++ A ++ M K+ + PD TYN +++ +GR D A +
Sbjct: 358 DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLI 417
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M KRG P + GLC K G+ ++A + MV +GI P ST
Sbjct: 418 DEMTKRGIQPDL--------GLC-KNGQGDDAENLMKEMVGKGITPDDST 458
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 136/329 (41%), Gaps = 75/329 (22%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ A LF ++ + P+ N +L +C G A +LR+M P+A +Y+
Sbjct: 98 APAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTV 153
Query: 121 IHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC + + V+ M+ R + P+ +TY +I CK ++E+A ++ DEM+ +G
Sbjct: 154 IAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQG 213
Query: 180 -ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P YNA++ +CDR ++++AL+ M + V TYN+++ L GR A
Sbjct: 214 EVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDA 273
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK-------------------------------- 266
V E M++ G P V TY+++++G CK
Sbjct: 274 YAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYA 333
Query: 267 --KKGKLEEACKYFEMMVDEGI-----------------------------------PPY 289
+KG+++E + F++ V +GI PP
Sbjct: 334 FSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPD 393
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMER 318
T L LG LD L D+M +
Sbjct: 394 DVTYNTLIRGFCLLGRLDEARGLIDEMTK 422
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 9/233 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G+ ++ + L+HAL A+ + ++ +P V TY+IL+ G G
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A ++F+EM + + + SL+ A + G + E + + G PD Y+
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I++ C D+ F ++ M++ + P+ TYN +IR C +++EA L+DEM +RG
Sbjct: 365 LINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
PD C + + A L+ M + + PD TY +++ L V
Sbjct: 425 IQPDLG--------LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTV 469
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
V+ GI+P + + L+++ C ++ A + + K P TY+ L+RG +G L
Sbjct: 351 VKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRL 410
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EAR L DEM +R D+ +CK G D+A +++EM G PD +Y
Sbjct: 411 DEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISL 462
Query: 121 IHAFCEANDIHSV 133
I ++ S
Sbjct: 463 IEGLTTVDEQMSA 475
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 146/314 (46%), Gaps = 7/314 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
GIKP + L+ ++++LC K V K P+V T++IL+ GL G++
Sbjct: 104 SLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVG 163
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +L D + + D+ + L+ +CK G EA G LR+M P+ YS +
Sbjct: 164 RAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVM 223
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + + M + PN+ TY C+I+ LC + +EA LLDEM++ G
Sbjct: 224 DGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVM 283
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD S N ++ C ++ A +I M +PD TYN ++ + D AT V
Sbjct: 284 PDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRV 343
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+E M RG P + Y+ ++HG CK K + +A + M+ G P T L+
Sbjct: 344 FELMVSRGCLPDIVAYTSLIHGWCKIK-NINKAMHLLDEMIKVGFTPDVVT----WTTLI 398
Query: 302 GLGFLDIIEILADK 315
G GF + LA K
Sbjct: 399 G-GFCQVGRPLAAK 411
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 161/320 (50%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G++PS+ L++ LC + V A + D+ K + VKTY +L+ GL +G+
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGK 196
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA +M ER +++ ++++++ +CK G + EA G+ EM G +P+ +Y+
Sbjct: 197 TSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTC 256
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +LD M + ++P++ + N ++ LCK K+ +A ++ MI G
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG 316
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN+++ +C + +++ A R+ M +PD Y ++ ++ ++A
Sbjct: 317 EVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAM 376
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M K GF P V T++ ++ G C + G+ A + F M G P T ++ +
Sbjct: 377 HLLDEMIKVGFTPDVVTWTTLIGGFC-QVGRPLAAKELFLNMHKYGQVPNLQTCAIILDG 435
Query: 300 LVGLGFLDIIEILADKMERS 319
L L L ME+S
Sbjct: 436 LCKSQLLSEALSLFHAMEKS 455
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 154/302 (50%), Gaps = 4/302 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF--FDNAKHEFTPTVKTYSILVRGLGDVG 58
M++ G+ P + L+ L+ LCK + A F E P V TY+ L+
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGE-VPDVFTYNSLIDRYCLQN 335
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ EA ++F+ M+ R C DI+A+ SL+ CK NI++A +L EM +G PD +++
Sbjct: 336 QMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWT 395
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+ + + +M +Y VPN+ T I+ LCK++ + EA L M +
Sbjct: 396 TLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ + Y+ IL C ++N AL L + + + + + + Y +++ + G D+A
Sbjct: 456 NLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKA 515
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ +ME+ G P TY+V V GL ++ ++ + KY MM D+G ++T EM+ N
Sbjct: 516 EDLLSNMEENGCMPDSCTYNVFVQGLVAER-EIARSIKYLTMMRDKGFSVDATTTEMIIN 574
Query: 299 RL 300
L
Sbjct: 575 YL 576
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 6/321 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ ++ LCK V A + + P + TY+ L++GL + G EA L
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEM++ D+ + N L++ +CK G I +A ++ M +G PD F+Y+ I +C
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N + RV + M +P++ Y +I CK + + +A LLDEMI+ G PD +
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ ++ C A L M K +P+ T ++L L + A ++ +ME
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K ++ YS+++ G+C GKL A + F + +G+ ++ N G L
Sbjct: 454 KSNLDLNIVIYSIILDGMC-SAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLL 512
Query: 307 DIIEILADKMERST----SCT 323
D E L ME + SCT
Sbjct: 513 DKAEDLLSNMEENGCMPDSCT 533
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS-IGAEPD 113
G + + EA F M + ++ LL + K + A +++EM S +G +PD
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
F ++ I++ C + F VL +M + L P+V T+ +I LC V A +L+D
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ + G D +Y ++ C + + A+ + +M + N P+ Y+ V+ L + G
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
A + M +G P++ TY+ ++ GLC G+ +EA + M+ G+ P ++
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC-NFGRWKEAGSLLDEMMKMGVMPDLQSL 289
Query: 294 EMLRNRL 300
+L + L
Sbjct: 290 NILVDVL 296
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M ++G P++ +L LCK + + A F K + YSI++ G+ G+
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +LF + + +++ A+ ++ K G +D+A +L M G PD+ +Y++
Sbjct: 477 LNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
F+ +I + L M+ + T II L N+ E + L
Sbjct: 537 FVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ P++Y L+ L K+ A + FD+ +P TY+IL+ GL G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ARKLF EM D +AHN+LL+ CK G + EA +LR G YS
Sbjct: 249 PEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A F + +M + N+ P++ Y +I+ L K K+E+A +LL M +G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + YNA++ C R + L M++ PD T+ +++ + R G +A
Sbjct: 369 ITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAE 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E++ +EK G PSV+T++ ++ GLC K G+L+EA
Sbjct: 429 EIFLEIEKSGCSPSVATFNALIDGLC-KSGELKEA 462
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 2/262 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE-AHGMLREM 105
+ +L+ +G +A + F M E C D+ +N +L M + A + EM
Sbjct: 130 FCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEM 189
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
P+ +++ I + + ++ D M + PN TY +I LC+
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSP 249
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E+A +L EM G PD ++NA+L C + A L+ K+ + Y+ +
Sbjct: 250 EDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L R R+ +A E++ +M KR P + Y++++ GL K GK+E+A K M +G
Sbjct: 310 IDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGL-SKAGKIEDALKLLRSMPSKG 368
Query: 286 IPPYSSTVEMLRNRLVGLGFLD 307
I P + + L G G L+
Sbjct: 369 ITPDTYCYNAVIKALCGRGLLE 390
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+D L A R++ + + + K P + Y+IL++GL G++ +A KL M
Sbjct: 310 IDGLFRA---RRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPS 366
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ D +N++++A+C G ++E + EM + PDA +++I I + C +
Sbjct: 367 KGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRK 426
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-------------------- 172
+ +++ P+V T+N +I LCK+ +++EA LL
Sbjct: 427 AEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGN 486
Query: 173 ---DEMIERGA----------------NPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
D M++ G+ +PD SYN ++ C +++ AL+L+ + +
Sbjct: 487 RSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLK 546
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ PD TYN ++ L RVGR + A +++ + K F S + Y ++ C+++
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRRR 599
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 154/345 (44%), Gaps = 45/345 (13%)
Query: 16 LLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ ++C+ V+ A + F + K +P+V T++ L+ GL GEL EAR L +M E
Sbjct: 414 LICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG 472
Query: 75 CPVDI---LAH--NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
P + LAH N + M ++G+I +A+ L G PD SY++ I+ FC D
Sbjct: 473 RPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGD 532
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I ++L+ ++ L P+ TYN +I L + + EEA++L + +P Y +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA--VYRS 590
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHT---------------------------- 221
++ + C R ++ +A L + K+ D T
Sbjct: 591 LMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 222 ------YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
Y + L L + GRF A V+ + ++ + + ++HGLCK++ +L+ A
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKRE-QLDAAI 709
Query: 276 KYFEMMVDEGIPPYSSTVE-MLRNRLVGLGFLDIIEILADKMERS 319
F +D +L + L ++I+ L ++MER+
Sbjct: 710 DVFLYTLDNNFKLMPRVCNYLLSSLLQSREKMEIVSQLTNRMERA 754
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
S+ + I E N ++ L+ +K + + + + +I K E+A + M
Sbjct: 94 SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153
Query: 176 IERGANPDEWSYNAILAYHCDRAEV--NMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
E PD ++YN IL R +V +A + M K N P+ +T+ +++ L + G
Sbjct: 154 KEFDCRPDVFTYNVILRIMM-REDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
R A ++++ M RG P+ TY++++ GLC ++G E+A K F M G P S
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLC-QRGSPEDARKLFYEMKASGNYPDSVAH 271
Query: 294 EMLRNRLVGLG 304
L + LG
Sbjct: 272 NALLDGFCKLG 282
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G KP++ + L+ LCK+ +K A + + ++ + P V T++ L+ GL G
Sbjct: 879 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 938
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A +LF +++ ++ + S++ CK ++ A + M+ G P+ +Y+
Sbjct: 939 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 998
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+A + +++ M +PN++TYN I LCK + EAY+LL++
Sbjct: 999 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 1058
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------------------------- 213
G D +Y ++ C + ++N AL RM K
Sbjct: 1059 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 1118
Query: 214 ----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++P + TY ++ + G D A + + +M++ G P TY ++ G
Sbjct: 1119 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 1178
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LC KK ++EACK +E M+D G+ P
Sbjct: 1179 LC-KKSMVDEACKLYEAMIDRGLSP 1202
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++ CK + A F K + P V TY+ L+ G G A +
Sbjct: 956 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 1015
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M + +I +N+ ++++CK EA+ +L + S G E D +Y+I I C
Sbjct: 1016 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 1075
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ NDI+ M + ++ N +I C+ +K++E+ +L ++ G P +
Sbjct: 1076 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 1135
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++++ +C ++++AL+ M + +PD TY ++ L + D A +++E+M
Sbjct: 1136 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 1195
Query: 246 EKRGFYPSVSTYSVMVHGLCKK 267
RG P T + + CK+
Sbjct: 1196 IDRGLSPPEVTRVTLAYEYCKR 1217
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 131/268 (48%), Gaps = 6/268 (2%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG 93
D TP+ T + ++ ++G + A +FDEM R D ++ ++ + G
Sbjct: 773 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 832
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
I EA L M G PD + ++ + A CE ++ M PN+ +
Sbjct: 833 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 892
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LCK +++A+++L+EM+ G P+ +++ A++ C R A RL ++ +
Sbjct: 893 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952
Query: 214 NVM-PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ P+ HTY ++ + + +RA ++ M+++G +P+V+TY+ +++G C K G
Sbjct: 953 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC-KAGSFG 1011
Query: 273 EACKYFEMMVDEGIPP----YSSTVEML 296
A + +M DEG P Y++ ++ L
Sbjct: 1012 RAYELMNLMGDEGFMPNIYTYNAAIDSL 1039
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 111/217 (51%), Gaps = 7/217 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGD 56
M + G P+IY + + +LCK+ A++ + A F+ ++ TY+IL++
Sbjct: 1020 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA---FSCGLEADGVTYTILIQEQCK 1076
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
++++A F M + D+ +N L+ A C+ + E+ + + + S+G P +
Sbjct: 1077 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 1136
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ I +C+ DI + +MKR+ VP+ FTY +I LCK V+EA +L + MI
Sbjct: 1137 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 1196
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+RG +P E + + +C R + A+ L+ + K+
Sbjct: 1197 DRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 1233
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+L + G ++EA GM+ +M++ G P + + + + E I V D M
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+VP+ +Y ++ ++ K++EA + L MI+RG PD + IL C+ VN A+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+M P+ + ++ L + G +A E+ E M + G+ P+V T++ ++ GL
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 265 CKKKGKLEEACKYFEMMV 282
C K+G E+A + F +V
Sbjct: 934 C-KRGWTEKAFRLFLKLV 950
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 16 LLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ A C++K +K + + F PT +TY+ ++ G++ A K F M
Sbjct: 1105 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 1164
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D + SL+ +CK +DEA + M G P + + +C+ ND +
Sbjct: 1165 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 1224
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L+ + + + V T ++RKLC +KV A +++E+ ++ D + A
Sbjct: 1225 ILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 1281
Query: 195 CDRAEVNMALRLITRMTK 212
+ + N+ L R+++
Sbjct: 1282 SESGKNNLVTDLTERISR 1299
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++R + ++ EA ++ +M +G P + N +L + + A + M+
Sbjct: 753 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 812
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V+PD +Y +++ R G+ A M +RGF P +T ++++ LC + G +
Sbjct: 813 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENGLVNR 871
Query: 274 ACKYFEMMVDEGIPP 288
A YF M+D G P
Sbjct: 872 AIWYFRKMIDLGFKP 886
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+N A+ ++ M + + P T N VL++ V +G + A V++ M RG P S+Y
Sbjct: 762 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+MV G C + GK++EA ++ M+ G P ++T ++ L G ++
Sbjct: 822 KLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 870
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 161/327 (49%), Gaps = 10/327 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA---HQ--FFDNAKHEFT--PTVKTYSILVRG 53
M + G P++ L+ LC ++ +A HQ D + + F P V +YSI++ G
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L VG EA LF+EM+++ +++ + L++ +CK G + +A +L M IG P+
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
F+Y+ I FC D++S + SM P+V +YN +I CK KVEEA +L +
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP-DRHTYNMVLKLLVRV 232
EM+ G PD + +L +V+ A L R+ K MP D + L L +
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF-RVIKPYAMPKDLCICCIFLDGLCKN 425
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
G A +++ +E + T+ ++ GLCK GKLE A + FE + +EGI P +
Sbjct: 426 GYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKA-GKLETAWELFEKLYEEGIQPDAMA 484
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERS 319
+ + G +D IL KME +
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEEN 511
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLF 67
SI+ ++LL L K +H + P + T +IL+ L +V ++E
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
++ R D++ +L++ +C I EA + M+ +G P+ +Y I C
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 128 NDIHSVFRVLDSMKR------YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+I+ + M +N PNV +Y+ II LCK EEA L +EM+++G
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +++ ++ C +V A +L+ M + ++P+ TY ++K VG + A E+
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ SM +G+ P V +Y+++++G CK K+EEA K F M+ G+ P T +L L
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTL-KVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388
Query: 302 GLGFLD 307
G +D
Sbjct: 389 LAGKVD 394
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 137/267 (51%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI P+++ L+ C + A + F + + + P V +Y++L+ G +
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF+EML D+ LL+A+ AG +D+A + R ++ D I
Sbjct: 358 VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI 417
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ C+ I ++ + ++ YN+ ++ T+ C+I LCK K+E A++L +++ E G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y++++ C + +V+ A L +M + PD TY+++++ + ++
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
++ M ++ +P Y+++ +CK
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCK 564
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 16/245 (6%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A + FD M+ I + N LL + K + + + ++M G PD + +I
Sbjct: 77 VTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNI 131
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C N I+ + + R +P+V T+ +I+ LC ++ EA +L M + G
Sbjct: 132 LINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG 191
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTYNMVLKLLVRVG 233
P+ +Y ++ C +N+AL+ M + N P+ +Y++++ L +VG
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVG 251
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----Y 289
++ A ++ M +G P+V T+SV++ LC K+G++ +A K EMM+ GI P Y
Sbjct: 252 NWEEAICLFNEMVDQGVQPNVVTFSVLIDMLC-KEGQVIKAKKLLEMMIQIGIVPNLFTY 310
Query: 290 SSTVE 294
+S ++
Sbjct: 311 TSLIK 315
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M+ G+ P + LL AL V A + F K P + I + GL G
Sbjct: 368 MLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGY 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF+E+ +DI L++ +CKAG ++ A + ++ G +PDA +YS
Sbjct: 428 IFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSS 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH FC+ + + M+ P++ TY+ ++R ++ K+E+ QLL MIE+
Sbjct: 488 MIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKD 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITR 209
PD+ Y + C + L L+ R
Sbjct: 548 VWPDDGIYAIVEDMVCKDEKYKEWLDLLQR 577
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 3/298 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P++ + + LCKR +VK A + P V T++ L+ GL +G
Sbjct: 246 MLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGW 305
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A +LF ++++ ++ + ++ CK G + A +L M G P+ +Y+
Sbjct: 306 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 365
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ + F +++ M+R PN++TYN +I LCK K++EAY++L +
Sbjct: 366 TLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQ 425
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G D+ +Y ++ HC + + AL L RM + PD HTY ++ + + + +
Sbjct: 426 GLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEES 485
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++++ P+ TY+ M+ G C K GK A + FE MV G S T L
Sbjct: 486 QKLFDKCLAIELVPTKQTYTSMIAGYC-KVGKSTSALRVFERMVQNGCQADSITYGAL 542
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
MV G+KP++Y L++ LCK + A + F + P V TY++++ G G
Sbjct: 281 MVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEG 340
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ A L M+E+ + + +L+ CK G+ + A ++ +MR G +P+ ++Y+
Sbjct: 341 KLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYN 400
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ I ++VL L + TY +I + CK + A L + M E
Sbjct: 401 ALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAEN 460
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD +Y ++A +C + ++ + +L + ++P + TY ++ +VG+ A
Sbjct: 461 GCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSA 520
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E M + G TY ++ GLCK+ +LEEA +E M+D+ + P
Sbjct: 521 LRVFERMVQNGCQADSITYGALISGLCKES-RLEEARALYEGMLDKRLVP 569
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 38/297 (12%)
Query: 27 KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSL 85
+ A F+ H V+T + ++R D G + ARK+FD M+ R + D + +L
Sbjct: 132 EAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRAL 191
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ C+ G ++E +L M+ G D + ++ + FC+ V + M
Sbjct: 192 IVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGT 251
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW-------------------- 185
PNV Y I LCK V++A+ +L+EM+ +G P+ +
Sbjct: 252 PPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFR 311
Query: 186 ----------------SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+Y ++ +C ++ A L+ RM ++ + P+ +TY ++
Sbjct: 312 LFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGH 371
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ G F+ A E+ M + GF P++ TY+ ++ GLC KKGK++EA K M ++G+
Sbjct: 372 CKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLC-KKGKIQEAYKVLRMANNQGL 427
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 116/236 (49%), Gaps = 4/236 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSEA 63
G +P+IY + L+ LCK+ ++ A++ A ++ K TY++++ G ++ A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF+ M E C DI + +L+ C+ ++E+ + + +I P +Y+ I
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ S RV + M + + TY +I LCK ++EEA L + M+++ P
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
E + + +C R + +A+ ++ R+ K HT N++++ L +G + A+
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRLDKRR---KNHTVNVLVRKLSAIGHVEDAS 623
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 38/280 (13%)
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE------------------------ 111
P+ A ++ A +AG + EA M+ EMRS G
Sbjct: 111 PMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARK 170
Query: 112 ------------PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
PDA S+ I C + V +L M+ + T I+R
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+ + + +L M+E G P+ +Y A + C RA V A ++ M + + P+
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYF 278
+T+ ++ L ++G +RA ++ + K Y P+V TY+VM+ G C K+GKL A
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYC-KEGKLARAEMLL 349
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
MV++G+ P ++T L + G + L +KM R
Sbjct: 350 GRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRR 389
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G P I+ L+ C+++ ++ + + FD E PT +TY+ ++ G VG+
Sbjct: 457 MAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGK 516
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++F+ M++ C D + + +L+ +CK ++EA + M P +
Sbjct: 517 STSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVT 576
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+C +LD + +R N T N ++RKL VE+A L + ++
Sbjct: 577 LAFEYCRREKAVVAVSILDRLDKRRKN-----HTVNVLVRKLSAIGHVEDASLFLKKALD 631
Query: 178 RGANPDEWSYNAIL 191
D +Y + +
Sbjct: 632 VDLAVDRLAYTSFI 645
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 2/276 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ L+H LC+ ++ A D + P+ +TY++L++ L D G + +A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
FDEM+ R C ++ + L++ +C+ G I+EA+G+ R+M G P +Y+ I+ +C+
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F +L M++ PNV T+N ++ LC+ K +A LL M++ G +PD S
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ C +N+A +L+T M ++ PD T+ ++ + G+ D A+ M
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++G T + ++ G+C GK +A E +V
Sbjct: 504 RKGISLDEVTGTTLIDGVC-NVGKTRDALFILETLV 538
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 3/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G + D +++ALCK + + A F K F + L+ G L +A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDA 249
Query: 64 RKLFDEML-ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
K+FD M E C + ++++ L+ +C+ G ++EA G+ +M G +P +Y++ I
Sbjct: 250 LKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+ I F + D M PNV TY +I LC++ K+EEA + +M++ G P
Sbjct: 310 ALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFP 369
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+YNA++ +C V A L+T M K P+ T+N +++ L RVG+ +A +
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M G P + +Y+V++ GLC ++G + A K M + P T + N
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLC-REGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCK 488
Query: 303 LGFLDIIEILADKMER 318
G D+ M R
Sbjct: 489 QGKADVASAFLGLMLR 504
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G KP+++ L+ LC+ ++ A+ K P+V TY+ L+ G G
Sbjct: 327 MIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGR 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M +R C ++ N L+E +C+ G +A +L+ M G PD SY++
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ +++L SM ++L P+ T+ II CK K + A L M+ +G
Sbjct: 447 LIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ DE + ++ C+ + AL ++ + K ++ H+ N++L +L + +
Sbjct: 507 ISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEEL 566
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + K G PSV TY+ +V GL + G + + + E+M G P ++ N
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLI-RSGDISGSFRMLELMKLSGCLPNVYPYTIIING 625
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ E L M+ S
Sbjct: 626 LCQFGRVEEAEKLLSAMQDS 645
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 8/283 (2%)
Query: 7 KPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
KP++ ++L+ LC+ K V + + DN +P + +Y++L+ GL G ++
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG---LSPDIVSYNVLIDGLCREGHMNV 459
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A KL M D L +++ A CK G D A L M G D + + I
Sbjct: 460 AYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C +L+++ + ++ + N I+ L K K++E +L ++ + G P
Sbjct: 520 GVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVP 579
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y ++ +++ + R++ M +P+ + Y +++ L + GR + A ++
Sbjct: 580 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+M+ G P+ TY+VMV G GKL+ A + MV+ G
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYV-NNGKLDRALETVRAMVERG 681
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M F ++P +++A CK+ VA F + + T + L+ G+ +VG+
Sbjct: 467 MNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGK 526
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A + + +++ + + N +L+ + K + E ML ++ +G P +Y+
Sbjct: 527 TRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTT 586
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + DI FR+L+ MK +PNV+ Y II LC+ +VEEA +LL M + G
Sbjct: 587 LVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +Y ++ + + +++ AL + M + + Y+ +L+ V + R T
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRET 706
Query: 240 ------EVWESMEKRGFYPSVSTYSV-MVHGLCKKKGKLEEACKYFEMMVDEGI 286
E+ +E+ G S S + +V LC K+G+ +E+ + ++ G+
Sbjct: 707 DPECIKELISVVEQLG--GSTSGLCIFLVTRLC-KEGRTDESNGLVQTILKSGV 757
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 111/265 (41%), Gaps = 48/265 (18%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
K P+V TY+ LV GL G++S + ++ + M C ++ + ++ +C+ G ++
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTY-- 152
EA +L M+ G P+ +Y++ + + + + +M + Y L +++
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Query: 153 ---------------NCI---------------------IRKLCKNEKVEEAYQLLDEMI 176
CI + +LCK + +E+ L+ ++
Sbjct: 694 RGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTIL 753
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+ G E + + I+ +C + + + LIT + K +P ++ +V++ L + G +
Sbjct: 754 KSGVFL-EKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTE 812
Query: 237 RATEVWESM-------EKRGFYPSV 254
RA E+ + EK G P V
Sbjct: 813 RARELVMELLTSNGVVEKSGVLPYV 837
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 13 LDQLLHALC-KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+D ++ + C K+KH K K F P+ K++ ++++GL G+ AR+L E+L
Sbjct: 763 IDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELL 822
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRS 107
V+ +E + + G+ E ++ ++ S
Sbjct: 823 TSNGVVEKSGVLPYVECLMETGDCSEVIDLVDQLHS 858
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 253 LIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A + RM + N+ D Y ++ L + GR A
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P + TY+++++ C KKG + + K + M G P T +L N
Sbjct: 373 KMLREMLSVGLKPDIGTYTMIINEFC-KKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMN 430
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + M ++++PD TYN ++ L + G +A + + M
Sbjct: 249 TFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A K+ + M+ I
Sbjct: 309 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFKHRKRMIQGNI 348
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ LH+ C H HQ AK V
Sbjct: 10 PANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQR 69
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 70 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHXLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLD 334
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD-VGE 59
+ FG + + LL ALC+ K+V+ A + + EF K+++I++ G + V
Sbjct: 197 LPSFGFDTGVAEFHGLLSALCRYKNVQDAEHLLISCEKEFPFETKSFNIVLNGWCNIVCS 256
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA++ + M + D++++ S++ KAG++ + M G PD Y+
Sbjct: 257 LREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNA 316
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A + + + ++ +M+ + P+ T+N +I LCK +V+EA ++ D M+ERG
Sbjct: 317 IVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERG 376
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +++A+L + EV L+ +M + P+ TY M+++ R + +
Sbjct: 377 LSPSVRTFHALLNVARNSTEV---FDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHESVE 433
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++W +M G P S Y V++HGL G+LEEA KY+ M +G P T EM+
Sbjct: 434 KLWSAMPANGLSPDRSAYIVLIHGLF-LNGRLEEAAKYYGEMKSKGFSPEKKTEEMITAW 492
Query: 300 LVG 302
L G
Sbjct: 493 LEG 495
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 44/275 (16%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIG-AEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A +S+L + K D A +L EMR A P A + + C A D+ + +
Sbjct: 139 ACHSMLAILAKHRRFDAARALLDEMRRASMASPAAVL--LLVRRHCAARDVAAAVAAFRA 196
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL--------------------------- 172
+ + V ++ ++ LC+ + V++A LL
Sbjct: 197 LPSFGFDTGVAEFHGLLSALCRYKNVQDAEHLLISCEKEFPFETKSFNIVLNGWCNIVCS 256
Query: 173 --------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
M +G + D SY ++++ ++ ++L M + V PDR YN
Sbjct: 257 LREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNA 316
Query: 225 VLKLLVRVGRFDRATEVW-ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ L + GR +A ++ +ME++ P +T++ ++ LCK + +++EA + F+ M++
Sbjct: 317 IVFALAK-GRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKAR-QVQEAMEMFDAMLE 374
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
G+ P T L N V ++ ++L DKM++
Sbjct: 375 RGLSPSVRTFHALLN--VARNSTEVFDLL-DKMKQ 406
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 144/290 (49%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
+++ G + ++ + QLL LC K V A EF P V Y+ ++ G G
Sbjct: 116 ILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREG 175
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ +A LF EM+++ P +++ + ++++ +CKA +D A G+ ++M G +PD +Y+
Sbjct: 176 QVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYN 235
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH + V ++L+ M + L P+ TY ++ LCKN + EA D M +
Sbjct: 236 CLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRK 295
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD Y +L + + ++ + M V P+R +N++ + + A
Sbjct: 296 GIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEA 355
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M ++G P V ++ ++ LC K G++++A F M++EG+ P
Sbjct: 356 MHIFNKMRQQGLSPDVVSFGALIDALC-KLGRVDDAVLQFNQMINEGVTP 404
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 157/332 (47%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P + L+ ALCK V A F+ +E TP + +S LV GL VG+
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF E+L++ VD + N+L+ +C G + EA ++ M +G P+ SY+
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C I ++LD M L PN FTY ++R CK +V++AY L EM+ +G
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN IL + A L M D +TYN++L L + D A
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAF 601
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ + + T+++M+ L K G+ E+A F + G+ P T ++
Sbjct: 602 KMFRRLCSKDPQLDSVTFNIMIGALL-KGGRKEDAMDLFATISAYGLVPDVVTYRLIAEN 660
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L+ G L + L ME+S + + NA+
Sbjct: 661 LIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 3/326 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G++P LL LCK + A FFD+ + P V Y+IL+ G G
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSE D M+ + N + A K I+EA + +MR G PD S+
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + M + PN+F ++ ++ LC K E+A +L E++++G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +N ++ C+ V A RLI M + V P+ +YN ++ GR D A
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M G P+ TY++++ G CK + ++++A F M+ +G+ P +T + +
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKAR-RVDDAYSLFREMLMKGVTPVVATYNTILHG 555
Query: 300 LVGLG-FLDIIEILADKMERSTSCTI 324
L G F + E+ + + T C I
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDI 581
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 9/288 (3%)
Query: 9 SIYDLDQLL----HALCKRKHVKVAHQFFDNAKH---EFTPTVKTYSILVRGLGDVGELS 61
S+ +QLL A C +V F A+ + P TYSIL+ +G L
Sbjct: 48 SVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLE 107
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG-MLREMRSIGAEPDAFSYSIF 120
F +L+ V+++ + LL+ +C A +DEA +L M G PD +Y+
Sbjct: 108 HGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTV 167
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ F + + + M + PNV TY +I LCK + V+ A + +MI+RG
Sbjct: 168 INGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGV 227
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ + + ++++ M+ + PD TY ++L L + GR A
Sbjct: 228 KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARL 287
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++SM ++G P V+ Y++++HG KG L E + ++MV G+ P
Sbjct: 288 FFDSMFRKGIKPDVAIYAILLHGY-ATKGALSEMHSFLDLMVGNGVSP 334
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M EFG P + + +++ + V+ A+ F + P V TY+ ++ GL
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+ +F +M++R D +N L+ G E ML EM + G EPD +Y++
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ DSM R + P+V Y ++ + E + LD M+ G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +N + + +A + A+ + +M ++ + PD ++ ++ L ++GR D A
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M G P++ +S +V+GLC GK E+A + F ++D+GI
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLC-TVGKWEKAEELFFEVLDQGI 437
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P++ ++ LCK + V A F P TY+ L+ G G+
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK 246
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E ++ +EM D + + LL+ +CK G EA M G +PD Y+I
Sbjct: 247 WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H + + + LD M + PN +N + K +EEA + ++M ++G
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD S+ A++ C V+ A+ +M E V P+ ++ ++ L VG++++A
Sbjct: 367 LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAE 426
Query: 240 EVW-----------------------------------ESMEKRGFYPSVSTYSVMVHGL 264
E++ + M + G P+V +Y+ +V G
Sbjct: 427 ELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGH 486
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C G+++EA K ++MV G+ P T +L
Sbjct: 487 C-LTGRIDEAAKLLDVMVSNGLKPNEFTYTIL 517
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+I+ L++ LC K K FF+ ++ L+ L + G
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++L D M+ +++++N+L+ C G IDEA +L M S G +P+ F+Y+I
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516
Query: 120 FIHAFCEA---NDIHSVFR------VLDSMKRYNLV------------------------ 146
+ +C+A +D +S+FR V + YN +
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR 576
Query: 147 --PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+++TYN I+ LCKN V+EA+++ + + D ++N ++ A+
Sbjct: 577 TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAM 636
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L ++ ++PD TY ++ + L+ G ++ +MEK G P+ + +V L
Sbjct: 637 DLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRL 696
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+G + A Y + ++ +ST ML
Sbjct: 697 L-HRGDISRAGVYLYKLDEKNFSLEASTTSML 727
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + LL CK + V A+ F + TP V TY+ ++ GL G
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA +L+ M+ + DI +N +L +CK +DEA M R + S + D+ +++I
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ Y LVP+V TY I L + + E L M + G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ NA++ R +++ A + ++ ++N + T +M++ L R
Sbjct: 682 TAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + L+ C + A + D + P TY+IL+RG
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF EML + + +N++L + + G EA+ + M + + D ++Y+I
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ N + F++ + + + T+N +I L K + E+A L + G
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y I + + L + M K P+ H N +++ L+ G RA
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAG 706
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
++++ F ST S+++
Sbjct: 707 VYLYKLDEKNFSLEASTTSMLI 728
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 149/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P+ TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 369 KMLREMLSVGLKPNXRTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 426
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ +LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 125 FYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 185 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 244
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + RM ++++PD TYN ++ L + G +A + + M
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEM 304
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 305 SMKGLKPDKITYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 344
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 1/223 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+LE + K G + + G + ++I +H FC+ DI V D++ ++
Sbjct: 109 VLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 168
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L P+V +YN ++ + ++E ++L M+ G PD ++Y+ ++ C ++++ A
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 228
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + ++P+ T+ ++ + GR D A E+++ M + P + TY+ +++GL
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
C KKG L++A + M +G+ P T L + G LD
Sbjct: 289 C-KKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 330
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 18/261 (6%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A F T+ +Y ++ L LSEA+ L ++ RK G+
Sbjct: 7 ANSTFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRK----------------GKGSA 50
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+ E + D F +S I A+ E+ + + + T +
Sbjct: 51 SAVFAAILETKGT-QRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKV 109
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ L K + + + ++E G + +N ++ C ++ +A + +TK +
Sbjct: 110 LEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 169
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P +YN ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A
Sbjct: 170 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KMDDAN 228
Query: 276 KYFEMMVDEGIPPYSSTVEML 296
+ F+ M+ +G+ P T L
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTL 249
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG+ ++ LL LCK + VK A F + P +++ LV G L
Sbjct: 227 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARML 286
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +EM + ++ + SL+EA C + + +L EMR P+ +Y+I
Sbjct: 287 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 346
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A D +K + P+ YN +I L + ++E+AY +++EM G
Sbjct: 347 MHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGI 406
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N +++ CD ++ AL+L+ +M +++ PD TY +LKL +
Sbjct: 407 APNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLF 466
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M ++ P STY+++V LC + GK+ ++C + E MV +G P T +++ +L
Sbjct: 467 LVCHMFRKDISPDFSTYTLLVSWLC-RNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 525
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+H CK + +K A + K H F+P+V TY+ LV +
Sbjct: 266 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 325
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM +R+CP +++ + L+ A+ KAG EA +++ G PDA Y+ I+
Sbjct: 326 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 385
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
A + + V++ M+ + PNV T+N +I C + + E A +LL +M E+ NPD
Sbjct: 386 GRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDI 445
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +L C R V + L L+ M ++++ PD TY +++ L R G+ ++ E
Sbjct: 446 KTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEE 505
Query: 245 MEKRGFYPSVSTYSVMVHGLCKK 267
M +GF P T+ +++ L K+
Sbjct: 506 MVSKGFAPKQETFDLVMEKLEKR 528
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ T + ++R L +EA F +M D A N LL+ +CK ++ A G+
Sbjct: 200 SLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVF 259
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+E+R PD S++ +H +C+A + ++ MK++ P+V TY ++ C
Sbjct: 260 QELRGT-IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCME 318
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + Y LLDEM +R P+ +Y ++ AL ++ ++ V PD Y
Sbjct: 319 KDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFY 378
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +L R GR + A V E M G P+V+T++ ++ C + E A K M
Sbjct: 379 NSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC-DHSQAENALKLLVKME 437
Query: 283 DEGIPP 288
++ P
Sbjct: 438 EQSCNP 443
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 147/311 (47%), Gaps = 3/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G+ ++ + LL LCK V+ AH K F P +Y+IL G
Sbjct: 162 MHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRT 221
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++ EM++R ++ +N++L+ ++ I EA EM+ E D SY+
Sbjct: 222 PMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTV 281
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH F EA ++ RV D M + + PNV TYN +I+ CK + V+ A + +EM+ G
Sbjct: 282 IHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGV 341
Query: 181 -NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ ++N ++ C ++ AL + RM + + TYN+V++ G ++
Sbjct: 342 CSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGL 401
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLC--KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
EV+ M P++ TY+V++ + KK L A K MV+ G P T +
Sbjct: 402 EVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVL 461
Query: 298 NRLVGLGFLDI 308
N LV G D
Sbjct: 462 NGLVITGNQDF 472
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 3/246 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+ KT +IL +G+ A + F M E D+ + N+LL+ +CK+ ++ AH +
Sbjct: 134 PSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDL 193
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR ++S PD SY+I + +C RVL M + + P + TYN +++ +
Sbjct: 194 LRTLKS-RFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR 252
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ +++EA++ EM +R D SY ++ + EV A R+ M KE V P+ T
Sbjct: 253 SNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVAT 312
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGF-YPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
YN ++++ + A V+E M + G P+V T++V++ GLC G +E A + E
Sbjct: 313 YNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLC-HVGDMERALGFMER 371
Query: 281 MVDEGI 286
M + G+
Sbjct: 372 MGEHGL 377
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 5/234 (2%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAG---NIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
LF + L+R P + +S A+ A + + A ++ MRS+ P + +I
Sbjct: 85 LFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAE 144
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+ H R SM + L ++ ++N ++ LCK+ +VE A+ LL + R P
Sbjct: 145 RYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-FRP 203
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D SYN + +C + MALR++ M + + P TYN +LK R + A E +
Sbjct: 204 DTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFY 263
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M+KR V +Y+ ++HG + G++++A + F+ MV EG+ P +T L
Sbjct: 264 LEMKKRKCEIDVVSYTTVIHGF-GEAGEVKKAKRVFDEMVKEGVAPNVATYNAL 316
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R I+ ++SL+ C +DEA M M S PD SYS I
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TY +I+ L + + A ++ EM+ G P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P V Y+ M+ G C +KG EEA F+ M ++G P S ++R RL
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 2/311 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P+I L LL+ C K + A D + P T++ L+ GL +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ + C D++ + ++ +CK G+ D A +L +M EP Y+
Sbjct: 202 ASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTT 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M+ + PNV TY+ +I LC + +A +LL +MIER
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD ++++A++ ++ A +L M K ++ P TY+ ++ R D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + +P V +YS ++ G CK K +++E + F M G+ + T L
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAK-RVDEGMELFREMSQRGLVGNTVTYTTLIQG 440
Query: 300 LVGLGFLDIIE 310
L G D+ +
Sbjct: 441 LFQAGDCDMAQ 451
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M G+ + Y L++ C+R + +A K + P + T S L+ G
Sbjct: 107 MQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA L D+M + + N+L+ + EA ++ M + G +PD +Y +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ D F +L+ M++ L P V Y II LCKN+ +++A L EM +G
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+++++ C+ + A RL++ M + + PD T++ ++ V+ G+ A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++ M KR PS+ TYS +++G C +L+EA + FE MV + P
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHD-RLDEAKQMFEFMVSKHCFP 394
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV G +P + +++ LCKR +A + + + P V Y+ ++ GL
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKH 271
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF EM + +++ ++SL+ +C G +A +L +M PD F++S
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + + ++ D M + ++ P++ TY+ +I C +++++EA Q+ + M+ +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SY+ ++ C V+ + L M++ ++ + TY +++ L + G D A
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+++ M G P++ TY+ ++ GLC K GKLE+A FE + + P T ++
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
MV+ I PSI L++ C + A Q F+ +KH F P V +YS L++G
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAK 410
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ E +LF EM +R + + + +L++ + +AG+ D A + +EM S G P+ +Y+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + V + ++R + P ++TYN +I +CK KVE+ + L + +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +++ C + A L M ++ +P+ YN +++ +R G + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ + M GF ST ++ + L G+L+++
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 624
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF EM++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + + VL M + PN+ T + ++ C ++++ EA L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ ++N ++ + + A+ LI RM + PD TY +V+ L + G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ ME+ P V Y+ ++ GLCK K +++A F+ M +GI P T L +
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNK-HMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 300 CLCNYGRWSDASRLLSDMIER 320
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + K P++ +S L+ + + + L ++M P + ++ L+ C+
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCR 128
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EP+ + S ++ +C + I ++D M PN T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N +I L + K EA L+D M+ +G PD +Y ++ C R + ++A L+ +M
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME 248
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P Y ++ L + D A +++ ME +G P+V TYS ++ LC G+
Sbjct: 249 QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRW 307
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + V G L E L D+M +RS +I ++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 331 MRG 333
+ G
Sbjct: 368 ING 370
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 6/300 (2%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEM 70
L ++ LCK K VA F E PT+K Y++L+ G +V + A LF+EM
Sbjct: 757 LIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM 816
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
C D +NSL++A K+G I+E + EM + G +P+ +Y++ I ++N +
Sbjct: 817 KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRL 876
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+ ++ + P T+ +I L K+ ++++A+++ D M+ G P+ YN +
Sbjct: 877 DKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL 936
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ + V+ A RM KE + PD +Y +++ +L GR D A +E +++ G
Sbjct: 937 VNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL 996
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
P + Y++M++GL + + + EEA F M + GI P T L ++ LG + +IE
Sbjct: 997 DPDLVAYNLMINGLGRSQ-RTEEALSLFHEMQNRGIVPDLYTYNSL---ILNLGIVGMIE 1052
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV G+KPS+ L+ A KR+++K + + P + TY+I +R LG G+
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ M + C D++ + L++A+C A +D+A + +M+S +PD +Y
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F + + V ++ M+ P+V T+ ++ LCK ++ EA+ LLD M ++G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ ++ AL L + M V P +TY +++ + G +A
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E +E M+ RG P++ + ++ L + G+L EA F + G+ P S T M+
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLA-EMGRLGEAKAMFNELKSSGLAPDSVTYNMM 515
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 134/257 (52%), Gaps = 1/257 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P V T++ILV L G ++EA L D M ++ ++ +N+L+ + +A +D+A
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL 424
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ M S+G EP A++Y + I ++ + MK + PN+ N + L
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSL 484
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+ ++ EA + +E+ G PD +YN ++ + +V+ A++L++ M+K PD
Sbjct: 485 AEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
N ++ L + GR + A +++ ME+ P+V TY++++ GL K+G++++A + FE
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGL-GKEGQIQKAVQLFE 603
Query: 280 MMVDEGIPPYSSTVEML 296
M G P + T L
Sbjct: 604 SMNGHGCSPNTITFNTL 620
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 1/274 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V TY I+ + L G L +A ++M E ++ ++N L+ + ++G EA + R
Sbjct: 159 VDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYR 218
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M S G +P ++S + A + +I +V +L+ M+ L PN++TY IR L ++
Sbjct: 219 RMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
K++EAY+++ M + G PD +Y ++ C +++ A+ L T+M + PD+ TY
Sbjct: 279 KIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYV 338
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+L G D+ ++W ME G+ P V T++++V+ LC K G++ EA + M
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC-KAGRINEAFDLLDTMRK 397
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+G+ P T L + L+ LD L ME
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 3/280 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G++P+ Y L+ K H A + F+ K P + + + L ++G
Sbjct: 430 MESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGR 489
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+ +F+E+ D + +N +++ K G +DEA +L EM + EPD +
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A + +++ M+ NL P V TYN ++ L K ++++A QL + M G
Sbjct: 550 LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ ++N +L C EV++AL++ +MT N PD T+N ++ ++ + A
Sbjct: 610 CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAI 669
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++ M+K P T ++ G+ K G++E+A + E
Sbjct: 670 WLFHQMKKL-LRPDHVTLCTLLPGVI-KSGQIEDAFRITE 707
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 2/295 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G+KP++ + L+ + +V+VA F+ K P TY+ L+ G G+++
Sbjct: 783 ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E L+DEML R C + + +N ++ + K+ +D+A + + S P ++ I
Sbjct: 843 ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLI 902
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
++ + + D M Y PN YN ++ K V+ A + M++ G
Sbjct: 903 DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIR 962
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SY ++ C V+ AL ++ + + PD YN+++ L R R + A +
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M+ RG P + TY+ ++ L G +EEA K +E + G+ P T L
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNL-GIVGMIEEAGKIYEELQFIGLKPNVFTYNAL 1076
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F +Y+ L+ L G EA +++ M+ + ++L+ A K NI
Sbjct: 190 FVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVM 249
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G+L EM S+G P+ ++Y+I I I +R++ M P+V TY +I L
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDAL 309
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C K+++A L +M PD+ +Y +L D ++ ++ T M + PD
Sbjct: 310 CTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDV 369
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T+ +++ L + GR + A ++ ++M K+G P++ TY+ ++ GL + +L++A F
Sbjct: 370 VTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRAN-RLDDALDLFS 428
Query: 280 MMVDEGIPPYSSTVEML 296
M G+ P + T +L
Sbjct: 429 NMESLGVEPTAYTYILL 445
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
+V P+ L+ L K + AH+ FD H P Y+ILV G G +G
Sbjct: 886 LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + F M++ D+ ++ L++ +C AG +D+A +++ G +PD +Y++
Sbjct: 946 VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + M+ +VP+++TYN +I L +EEA ++ +E+ G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
P+ ++YNA++ + +A + +M P+ T+
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V D M+R + NV TY I + L + +A L++M E G + +SYN ++ +
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
AL + RM E + P T++ ++ + + E ME G P++
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
TY++ + L + GK++EA + + M D+G P T +L + L LD L K
Sbjct: 266 TYTICIRVL-GRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTK 324
Query: 316 MERST 320
M+ S+
Sbjct: 325 MKSSS 329
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + + +++ L + + + A F ++ P + TY+ L+ LG VG + EA
Sbjct: 995 GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
K+++E+ ++ +N+L+ +GN + A+G+ ++M G +P+ +++
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFA 1109
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +Y + L+H L + K F + F+P T++IL+ GL G++ EA
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ + M + DIL +N+L+ +C G +++A + + G + + FSY+I I+
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ I FR+ + M+ L P+ TYN +I LC++ +V A +L EM G
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L C + A+ L + K P+ ++++L + R G+ + A + ++
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ K G P Y+++++GLC KG L EA K M ++G P S T ++ L+
Sbjct: 451 EISKNGLEPDTIAYNILINGLC-NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 2/274 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
K ++ ++ +LCK A F P V YS L+ GL G L EA +
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 202
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F EM R D+ +NSL+ + +AG E L M G PDAF+++I I C
Sbjct: 203 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 262
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + ++L+ M P++ TYN ++ LC ++E+A +L + + +RG + +
Sbjct: 263 KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SYN ++ +C +++ A RL M + + P TYN ++ L + GR A +++ M
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 382
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ G + +STY V++ GLC K G LEEA F+
Sbjct: 383 QTCGQFLKLSTYCVLLDGLC-KNGHLEEAIDLFQ 415
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G+ L++ LCK + +A + + K V TY +++ L G
Sbjct: 103 MTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMT 162
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+EA +F EM+ D++ ++SL++ +C+ G + EA +EM G D ++Y+
Sbjct: 163 TEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSL 222
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
IH A V L+ M P+ FT+ +I LCK KV EA Q+L+ M +G
Sbjct: 223 IHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK 282
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN ++ C ++ A +L + + + +YN+++ + + D A
Sbjct: 283 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR 342
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++E M +G PS TY+ ++ LC + G++ A K F
Sbjct: 343 LFEEMRPKGLKPSTVTYNTLIGALC-QSGRVRTAQKLF 379
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 143/297 (48%), Gaps = 36/297 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ G P + L+ LCK V A Q + H+ P + TY+ L+ GL VG+
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 60 LSEARKLFDEMLERKCPVDILAHN-----------------------------------S 84
L +A KLF+ + +R +++ ++N +
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ A+C++G + A + EM++ G +Y + + C+ + + S+K+
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PN+ ++ ++ +C+ K+EEA++ DE+ + G PD +YN ++ C++ ++ A+
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 481
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+L+ +M ++ +PD T+N++++ L++ A ++ E M R F P + S+++
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER----------------------- 73
K F P T + LV+G+ + +A +LFDEM E+
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 74 -----------KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
C D+ + +++++CK G EA M EM G PD YS +
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + M+ + +V+TYN +I L + +E L+ M++RG +P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +++ ++ C +V A +++ M + PD TYN ++ L VG+ + AT+++
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
ES+ RG +V +Y+++++G CK + K++EA + FE M +G+ P + T N L+G
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQ-KIDEAFRLFEEMRPKGLKPSTVTY----NTLIG 364
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ + GIK +++ + L++ CK + + A + F+ + + P+ TY+ L+ L G
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+KLF EM + + + LL+ +CK G+++EA + + ++ +P+ +SI
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + ++ D + + L P+ YN +I LC + EA +LL +M E+G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
PD ++N I+ E++ A++L+ M N PD +M+L L
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 540
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
L+R D + +L++ + I +A + EM G DA +Y I I+ C+A
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
++ + MK N +VFTY II LCK+ EA + EMI G PD Y+++
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ C + AL M + D +TYN ++ L R G + T M RGF
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247
Query: 251 YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD--- 307
P T+++++ GLC K+GK+ EA + E+M +G P T L N L +G L+
Sbjct: 248 SPDAFTFTILIDGLC-KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306
Query: 308 -IIEILADK 315
+ E LAD+
Sbjct: 307 KLFESLADR 315
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 159/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++ G KP++ L+ LCK +H+ A + F+ + P V TY+ LV GL ++G
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L +M++R+ +++ +L++A K G + EA + M + PD F+Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + ++ M+R PN Y +I CK+++VE+ ++ EM ++G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y ++ +C ++A + +M+ PD TYN++L L G+ ++A
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M KR ++ TY++++ G+CK GK+E+A F + +G+ P T + +
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKL-GKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 300 LVGLGFLDIIEILADKME 317
G + + L KM+
Sbjct: 478 FCRRGLIHEADSLFKKMK 495
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ + L+ LC+ + A D K P V T++ L+ VG+L EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L++ M++ D+ + SL+ +C G +DEA M M G P+ Y+ IH
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + ++ M + +V N TY +I+ C + + A ++ ++M R A PD
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C +V AL + M K + + TY ++++ + ++G+ + A +++
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S+ +G P+V TY+ M+ G C ++G + EA F+ M ++G P S
Sbjct: 458 SLFSKGMKPNVITYTTMISGFC-RRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P + LL+ C ++ A FD F P V TY+ L+R L
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +LF++M +++ +N+L+ +C+ G +A +LR+M EP+ +++
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + + + + M + ++ P+VFTY +I LC ++EA Q+ M G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E Y ++ C V +++ M+++ V+ + TY ++++ VGR D A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM----VDEGIPPYSSTVE 294
EV+ M R P + TY+V++ GLC GK+E+A FE M +D I Y+ ++
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLC-CNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 33 FDNAKHEFT--------PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
F++A FT P++ ++ L+ + + LF++M P + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ +C + A L +M +G EPD +++ ++ +C N I + D +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV TY +IR LCKN + A +L ++M G+ P+ +YNA++ C+ A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ M K + P+ T+ ++ V+VG+ A E++ M + YP V TY +++GL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C G L+EA + F +M G P
Sbjct: 304 C-MYGLLDEARQMFYLMERNGCYP 326
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL ++ + ++A LF M+ + I+ LL + K D + +M+ +
Sbjct: 54 ILRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P + +I +H C ++ L M + P++ T+ ++ C ++E+A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L D+++ G P+ +Y ++ C +N A+ L +M P+ TYN ++
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L +GR+ A + M KR P+V T++ ++ K GKL EA + + +M+ + P
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV-KVGKLMEAKELYNVMIQMSVYP 291
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
T L N L G LD + MER+
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY IL + N AL L TRM +P + +L ++ ++ R+D ++E M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ G P + T ++++H +C +C + M+ G P T L N
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASC-FLGKMMKLGFEPDLVTFTSLLN 161
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+Y I+R N + +A L M+ P + +L+ ++ + L +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ P T N+V+ + + RA+ M K GF P + T++ +++G C +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN-R 168
Query: 271 LEEACKYFEMMVDEGIPP----YSSTVEML-RNR 299
+E+A F+ ++ G P Y++ + L +NR
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 3/293 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI + + L+H C + A + + P T++ILV L G + EA
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ +F M++R DI+ +N+L+E C + N+ EA + M G EPD +Y++ I+
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + + + ++ NLVPN+ TYN +I LCK ++ +L+DEM +RG +PD
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPD 404
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN L C A+ L R + + PD + Y+++++ + + A E +
Sbjct: 405 IVTYNIFLDAFCKSKPYEKAISLF-RQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQ 463
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G P+V TY++M++ LC K +EA M D PP + T E +
Sbjct: 464 HLLIHGCCPNVRTYTIMINALC-KDCSFDEAMTLLSKMDDNDCPPDAVTFETI 515
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 143/284 (50%), Gaps = 8/284 (2%)
Query: 11 YDLDQ-----LLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEAR 64
Y LD+ L++ LCK + A Q + + P + TYS ++ GL +++A
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+LF + R VD++A+NSL+ C G EA +L M PD ++++I + A
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ I V M + P++ TYN ++ C + V EA +L + M++RG PD
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ +C V+ A+ L + +N++P+ TYN ++ L ++GR E+ +
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M RG P + TY++ + CK K E+A F +V +GI P
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSK-PYEKAISLFRQIV-QGIWP 437
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I+ D+LL A+ + H A F + TP++ T +IL+ LS A L
Sbjct: 53 PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+L+ +++ N+L+ C G + +A ++ + G D FSY I+ C+
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++L M+ + PN+ TY+ +I LCK+ + +A +L + RG D +
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN+++ C + A RL+T M + N+ PD +T+N+++ L + GR A V+ M
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
KRG P + TY+ ++ G C + EA + F MV G+ P
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSN-NVSEARELFNRMVKRGLEP 333
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 3/287 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV I P Y + L+ ALCK + A F K P + TY+ L+ G
Sbjct: 256 MVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNN 315
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR+LF+ M++R D+L +N L+ CK +DEA + +E+R P+ +Y+
Sbjct: 316 VSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNS 375
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + V ++D M P++ TYN + CK++ E+A L ++++ G
Sbjct: 376 LIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-G 434
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + Y+ I+ C ++ +A + + P+ TY +++ L + FD A
Sbjct: 435 IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ M+ P T+ ++ L +++ + ++A K M++ G+
Sbjct: 495 TLLSKMDDNDCPPDAVTFETIIGAL-QERNETDKAEKLRLEMIERGL 540
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ ML + P I + LL A+ + G+ A + ++ S G P + +I I+ +C
Sbjct: 43 FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F +L ++ + PN+ T+N +I C N V +A +++ +G DE+S
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C + AL+L+ +M ++ V P+ TY+ V+ L + A ++ +
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
RG V Y+ ++HG C G+ EA + MMV I P T +L + L
Sbjct: 223 SRGILVDVVAYNSLIHGCC-SVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 2/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ G++P + + + L++ CK V A F + P + TY+ L+ GL +G
Sbjct: 326 MVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGR 385
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S ++L DEM +R DI+ +N L+A CK+ ++A + R++ G PD + Y +
Sbjct: 386 MSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDV 444
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + L + + PNV TY +I LCK+ +EA LL +M +
Sbjct: 445 IVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDND 504
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
PD ++ I+ +R E + A +L M + ++ D
Sbjct: 505 CPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
V+ L RM +++ P ++ +L +VR+G + A ++ + +G PS++T ++
Sbjct: 36 VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ C + L A ++ G P T L N
Sbjct: 96 LINCYC-HQAHLSFAFSLLGTILKMGFQPNMVTFNTLIN 133
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 3/294 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ PS L+ +L V++A + F + + +P ++ ++V ++G + EA
Sbjct: 184 GLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + M+ER VD +++A C+ G ++ G +M +G P+ +++ I+
Sbjct: 244 ERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALING 303
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANP 182
C+ I F +L+ M R PNV+T+ +I LCK E+A++L +++ G P
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y A++ +C ++N A L++RM ++ ++P+ +TY ++ +VG F RA E+
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M K GF P++ TY+ ++ GLC KKG L+EA + + G+ T +L
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLC-KKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 156/294 (53%), Gaps = 3/294 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G ++ A C++ +V +V F+ + P V ++ L+ GL G
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYS 118
+ +A +L +EM+ R ++ H +L++ +CK G ++A + L+ +RS G +P+ +Y+
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ +C+ + ++ +L M+ LVPN TY +I CK AY+L+D M +
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++YNAI+ C + ++ A RL+ +++ + D TY +++ + R +R+
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M K GF P + +Y+ ++ C++K +++E+ + FE V G+ P T
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISTFCRQK-QMKESERLFEEAVSLGLIPTKKT 542
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP+++ +++ CK + A + + P TY+ L+ G VG A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M + +I +N++++ +CK G++DEA+ +L ++ G + D +Y+I +
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C D + + M + P++ +Y +I C+ ++++E+ +L +E + G P
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPT 539
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +Y +++ +C ++A++L RM+ PD TY ++ L + + D A +++
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 599
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKK 267
+M +G P T + + CKK
Sbjct: 600 AMMDKGLSPCEVTRLTLAYEYCKK 623
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P I+ L+ C++K +K + + F+ A PT KTY+ ++ G G
Sbjct: 496 MLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A KLF M C D + + +L+ +CK +D+A + M G P +
Sbjct: 556 TSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLT 615
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ +D + VLD +++ + V N ++RKLC K++ A +++++
Sbjct: 616 LAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAALFFHKLLDKE 672
Query: 180 AN 181
N
Sbjct: 673 PN 674
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 2/226 (0%)
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G + EA M+ EM++ G P + + + + + M + + P+ ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
++ C +V EA + L+ M+ERG D + I+ C + VN + +M +
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ P+ + ++ L + G +A E+ E M +RG+ P+V T++ ++ GLC KKG E
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC-KKGWTE 346
Query: 273 EACKYFEMMV-DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+A + F +V +G P T + N L+ E+L +M+
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F E + ++ M+ LVP+ T NC++ VE A + EM +RG +PD
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
S+ ++ C+ V A R + M + + D T +++ + G +R +
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + G P+V ++ +++GLC K+G +++A + E MV G P T L + L
Sbjct: 284 KMVEMGLAPNVINFTALINGLC-KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
Query: 304 GFLDIIEILADKMERS 319
G+ + L K+ RS
Sbjct: 343 GWTEKAFRLFLKLVRS 358
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++ +N K++EA ++ EM +G P + N +L V +A + M +
Sbjct: 159 CMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQR 218
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V PD ++ +++ +GR A +M +RGF +T ++++ C +KG +
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFC-QKGYVNR 277
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMERS 319
YF MV+ G+ P L N L G + E+L + + R
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
I P++ L++ C + A + K P V T+SIL+ LG G++ A+
Sbjct: 240 IYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAK 299
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ M++ D++ +NSL++ + A + M G P SY+I I
Sbjct: 300 IVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGL 359
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + + MK N++PN T+N +I LCK+ ++ + L+D+M +R D
Sbjct: 360 CKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADV 419
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y++++ C ++ A+ L +M + + PD +TY +++ L + GR A EV++
Sbjct: 420 ITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQH 479
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +G++ + TY+VM+ G C K G +EA M D G P + T +++
Sbjct: 480 LLIKGYHLDIRTYTVMISGFC-KAGLFDEALALLSKMEDNGCIPNAITFDII 530
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 149/313 (47%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI + L+ L++ C + ++ K + P V T + L++GL GE+ +A
Sbjct: 99 GITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKA 158
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K D+++ + +D +++ +L+ +CK G A ++R + +PD Y+I I +
Sbjct: 159 LKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDS 218
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M + PNV TY +I C + EA LL+EM + NPD
Sbjct: 219 LCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPD 278
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++++ ++ ++ A ++ M K V PD TYN ++ V A V+
Sbjct: 279 VYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFN 338
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
SM + G P V +Y++M+ GLCK K ++EA FE M + + P + T L + L
Sbjct: 339 SMAQSGVTPGVQSYTIMIDGLCKTK-MVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKS 397
Query: 304 GFLDIIEILADKM 316
G + + L DKM
Sbjct: 398 GRIAYVWDLVDKM 410
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 37/342 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L L+ LC R VK A +F D+ EF +Y L+ GL +GE A
Sbjct: 134 GYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAA 193
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + ER D++ +N +++++CK + EA + EM + P+ +Y+ I+
Sbjct: 194 IQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYG 253
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA--------------- 168
FC + +L+ MK N+ P+V+T++ +I L K K++ A
Sbjct: 254 FCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPD 313
Query: 169 ----------YQLLDE----------MIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
Y L++E M + G P SY ++ C V+ A+ L
Sbjct: 314 VVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFE 373
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M +NV+P+ T+N ++ L + GR ++ + M R V TYS ++ LC K
Sbjct: 374 EMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALC-KN 432
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIE 310
L++A F+ M+ + I P T +L + L G L I +
Sbjct: 433 CHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 2/282 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEAR 64
I P +Y L+ AL K +K A + P V TY+ LV G V E+ A+
Sbjct: 275 INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAK 334
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F+ M + + ++ +++ +CK +DEA + EM+ P+ +++ I
Sbjct: 335 YVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGL 394
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C++ I V+ ++D M+ + + +V TY+ +I LCKN +++A L +MI + PD
Sbjct: 395 CKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDM 454
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y ++ C + +A + + + D TY +++ + G FD A +
Sbjct: 455 YTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSK 514
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
ME G P+ T+ +++ L +K ++A K M+ G+
Sbjct: 515 MEDNGCIPNAITFDIIICALFEKDEN-DKAEKLLREMIARGL 555
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 7/220 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ P + ++ LCK K V A F+ KH+ P T++ L+ GL G
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L D+M +R D++ ++SL++A+CK ++D+A + ++M + +PD ++Y+I
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTI 459
Query: 120 FIHAFCEANDI---HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I C+ + VF+ L +K Y+L ++ TY +I CK +EA LL +M
Sbjct: 460 LIDGLCKGGRLKIAQEVFQHL-LIKGYHL--DIRTYTVMISGFCKAGLFDEALALLSKME 516
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ G P+ +++ I+ ++ E + A +L+ M ++
Sbjct: 517 DNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A LF+ ML + P N++L ++ K A + + + G D + +I
Sbjct: 51 NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ FC I F VL ++ + P+V T +I+ LC +V++A + D+++
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
D SY ++ C E A++L+ + + ++ PD YN+++ L + A
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M + YP+V TY+ +++G C G L EA M + I P T +L + L
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFC-IMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL 289
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P F +N I+ L K ++ A L + +G D + N ++ C ++ ++ +
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ + K PD T ++K L G +A + + + F +Y +++GLC
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLC- 185
Query: 267 KKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLVG 302
K G+ + A + + + I P Y+ ++ L +N+LVG
Sbjct: 186 KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVG 226
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 42/356 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA---KHEFTPTVKTYSILVRGLGDV 57
M GI+P++ + LL LCK + A + + TP + TYS L+ G
Sbjct: 36 MAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKA 95
Query: 58 GELSEARKLFDEMLERK------------------------------------CPVDILA 81
G++ E+R+L E++ R CP ++
Sbjct: 96 GKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPT-LIT 154
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
N+L+ C+ N++ A +L+ M + G + D +Y+ + C+A + ++L+ MK
Sbjct: 155 FNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
P+V Y+ + LCK+ KV A+Q+L++M + +P+ +YN IL C +++
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKID 274
Query: 202 MALRLITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
AL ++ +M + + + Y+ V+ L ++GR A V E+M + G P V TYS +
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
V+GLCK GK+EEA + M EG P + T L + L G L E + ++M
Sbjct: 335 VNGLCKA-GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 7/279 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+K + + L+ LCK ++ A Q + K P V YS V GL G+
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
+ A ++ ++M + +++ +N++L+ +CK+G ID A M+ +M S G + YS
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ V+++M R P+V TY+ ++ LCK K+EEA + + EM
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRM-----TKENVMPDRHTYNMVLKLLVRVG 233
G P+ +Y +++ C + A R++ M ++ P TYN ++ L + G
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAG 417
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
R D A + ++ M +G P +YS +V GL + L+
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 3/286 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P T++ LV G G + +L + M R +++++N LLE +CK EA +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 102 LREMRSIG--AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+R+M S G + PD +YS + +C+A + +L + L P+ Y ++ L
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK+ ++ EA +LL+EMI G P ++N +++ C + MA L+ M V D
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TYN ++ L + GR A ++ E M+ G P V YS V+GLC K GK+ A + E
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC-KSGKVLNAHQVLE 246
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
M D P T + + L G +D + ++M S C +
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLN 292
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M G P++ +++ ++ F + R+L++M + PNV +YN ++ LCK E+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 165 VEEAYQLLDEMIERG--ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
EA +L+ +MI RG + PD +Y+ +L+ +C +V + L+ + + PD Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
V+ L + R A E+ E M + G P++ T++ ++ G C++K LE A + M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK-NLEMADSLLQTMA 179
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
G+ T L + L G L E L ++M+ S
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN------AKHEFTPTVKTYSILVRGLGDVG 58
G KP+ L+H LC + A + + P+V TY+ L+ GL G
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAG 417
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
+ +A K F M + C D +++++++E + ++G +A
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
EFG+ P++ L+ CK +V +A F + P TYS+L+ G G
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E ++++ M + A+N L+ C G +D+A + EMR G +Y+I I
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C +++ + + L PN+ TYN +I C K++ A +L +++ G +
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +YN ++A + + AL L+ M + + P + TY +++ R+ ++A E+
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEM 425
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
MEK G P V TYSV++HGLC G ++EA K F+ + + + P S
Sbjct: 426 HSLMEKSGLVPDVYTYSVLLHGLC-VHGNMKEASKLFKSLGEMHLQPNS 473
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M+ G P + LL L + + A F+ K + ++ I+++G + G
Sbjct: 115 MIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYF 174
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ +L + E +++ + +L++ CK GN+ A + +M +G P+ +YS+
Sbjct: 175 VKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVL 234
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
++ F + F++ ++MKR +VPN + YNC+I + C + V++A+++ EM E+G
Sbjct: 235 MNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGI 294
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+YN ++ C + A++L+ ++ K + P+ TYN+++ V + D A
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVR 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ ++ G P++ TY+ ++ G K + L A + M + I P T +L
Sbjct: 355 LFNQLKSSGLSPTLVTYNTLIAGYSKVE-NLAGALDLVKEMEERCIAPSKVTYTIL 409
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 8/266 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKH----VKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E GI + + L+ LC+ K VK+ H+ K +P + TY+IL+ G D
Sbjct: 289 MREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV---NKVGLSPNIVTYNILINGFCD 345
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
V ++ A +LF+++ ++ +N+L+ K N+ A +++EM P +
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I I AF N + M++ LVP+V+TY+ ++ LC + ++EA +L +
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLG 465
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
E P+ YN ++ +C ALRL+ M + ++P+ ++ + LL R ++
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWK 525
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVH 262
A + M G PSVS Y MVH
Sbjct: 526 EAELLLGQMINSGLKPSVSLYK-MVH 550
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
+ G+ P+I + L++ C + + A + F+ K +PT+ TY+ L+ G V L+
Sbjct: 326 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A L EM ER + + L++A + + ++A M M G PD ++YS+ +
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLL 445
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H C ++ ++ S+ +L PN YN +I CK A +LL+EM++ G
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMV 505
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
P+ S+ + + C + A L+ +M + P Y MV K+
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKV 552
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
GI P+ Y + L+ C V A + F + + V TY+IL+ GL + EA
Sbjct: 258 GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEA 317
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL ++ + +I+ +N L+ C +D A + +++S G P +Y+ I
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAG 377
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + ++ ++ M+ + P+ TY +I + E+A ++ M + G PD
Sbjct: 378 YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPD 437
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++Y+ +L C + A +L + + ++ P+ YN ++ + G RA +
Sbjct: 438 VYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
M + G P+V+++ + LC+ + K +EA M++ G+ P S +M+
Sbjct: 498 EMVQSGMVPNVASFCSTIGLLCRDE-KWKEAELLLGQMINSGLKPSVSLYKMVH 550
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ + + AL + M E +P +T+N +L LL+R FD+A ++ ++
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + S + +M+ G C + G + + M+ + G+ P
Sbjct: 152 SKVVLDAYS-FGIMIKGCC-EAGYFVKGFRLLAMLEEFGLSP 191
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGL----- 54
M+ GI P I ++L+H LCK+ H++ + + K+ P + T++I ++GL
Sbjct: 207 MLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGV 266
Query: 55 --GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G ++ EA +M+ + D +N+++ K G I +A +L++ + G P
Sbjct: 267 LEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVP 326
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D F+Y I C+ DI + + L P++ YN +I+ L + V +A QL+
Sbjct: 327 DEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLM 386
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
++M + G +PD W+YN ++ C V+ A L+ + +PD T+N ++ +
Sbjct: 387 NDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKR 446
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ D A + +SM G P V TY+ +++GLC K K E+ + F+M++++G P T
Sbjct: 447 LKMDNAIGILDSMWSHGVTPDVITYNSILNGLC-KAAKPEDVMETFKMIMEKGCLPNIIT 505
Query: 293 VEML 296
+L
Sbjct: 506 YNIL 509
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 38/321 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KPSI + L+ L ++ V A Q D +K +P + TY++++ GL +G +S+A
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L + + + DI N+L++ CK +D A G+L M S G PD +Y+ ++
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A V + +PN+ TYN +I LCK KV EA LL+E+ RG PD
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKE----------NVM----------------- 216
S+ +++ C+ +++ A +L RM ++ N+M
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597
Query: 217 ---------PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
PD +TY +++ +VG + + + GF PS++T+ +++ LC +
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQ 657
Query: 268 KGKLEEACKYFEMMVDEGIPP 288
++ EA +MV G+ P
Sbjct: 658 H-RVHEAVGIVHLMVRTGVVP 677
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 152/309 (49%), Gaps = 9/309 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
+ +PSI+ + +++ L + + AH+ + KHE P V T++I ++
Sbjct: 105 YNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLA 164
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +L + M + C ++ + + +++ + EA+ + +M +G P +++ +H
Sbjct: 165 ALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMH 224
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK-------NEKVEEAYQLLDEM 175
C+ + ++L+ + + + PN+FT+N I+ LC+ N KV EA L +M
Sbjct: 225 ILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKM 284
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ +G PD+++YN I+ + ++ A R++ + +PD TY ++ + + G
Sbjct: 285 VNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI 344
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A ++E +G PS+ Y+ ++ GL ++G + +A + M EG+ P T +
Sbjct: 345 DHALALFEEALGKGLKPSIVLYNTLIKGL-SQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403
Query: 296 LRNRLVGLG 304
+ N L +G
Sbjct: 404 VINGLCKMG 412
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 8/250 (3%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y +R G G++ EA +F+ M C I ++N+++ + + G ++AH + M
Sbjct: 78 VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G PD +++I I +FC + R+L++M N Y +I +
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQ 197
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EAY+L ++M+ G P ++N ++ C + + +L+ ++ K V P+ T+N+
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257
Query: 226 LKLLVRVGRFDRA-TEVWES------MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++ L R G + A ++V E+ M +G P TY+ +++G K GK+++A +
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY-SKVGKIQDASRIL 316
Query: 279 EMMVDEGIPP 288
+ +G P
Sbjct: 317 KDAKFKGFVP 326
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
++E G P+I + L+ +LCK + V A + ++ P ++ ++ G + G+
Sbjct: 494 IMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGD 553
Query: 60 LSEARKLFDEMLE--RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L EA +LF M + R C + +N ++ A + ++D A + EM G +PD+++Y
Sbjct: 554 LDEAYQLFRRMEQQYRICHT-VATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTY 612
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I FC+ +++S + L VP++ T+ +I LC +V EA ++ M+
Sbjct: 613 RVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVR 672
Query: 178 RGANPD 183
G P+
Sbjct: 673 TGVVPE 678
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 136 VLDSMKRYNLVPNVF-TYNCIIRKLCKNEKVEEAYQLLDEM-IERGANPDEWSYNAILAY 193
+ +S+K+ + + F TY +I KL + + + ++L EM + + E Y + +
Sbjct: 26 IFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRN 85
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
+ + +V A+ + RM N P +YN ++ +LV G F++A +V+ M+ G P
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 254 VSTYSVMVHGLCKKKGKLE----------------------------------EACKYFE 279
V T+++ + C+ K L EA + F
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
M+ GI P+ +T L + L G L E L +K+ ++ C
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC 248
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 39/328 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEA 63
++P++ + ++ +LCK K V A K F P V TY+ L+ G VG L EA
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF-PDVVTYTTLIYGCLIVGRLKEA 258
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML--------------------- 102
LF++ML + D+ N L++ +CK G + +A +L
Sbjct: 259 VGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318
Query: 103 --------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
M G PD SYSI I+ C+ + + M ++ PN
Sbjct: 319 YFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TYN +I L K ++ +A+ L++EM RG D +Y+++L C +V+ A+ LIT
Sbjct: 379 TVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLIT 438
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ + + P+ +TY +++ L + GR A V++ + +G++ V Y+VMV+GLC K+
Sbjct: 439 KIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC-KE 497
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEML 296
G +EA M D G P + T E L
Sbjct: 498 GLFDEALSLVSKMEDNGCIPDAVTYETL 525
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 165/331 (49%), Gaps = 6/331 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+P ++ + L++ C H+ A K F P T + L++GL G++ EA
Sbjct: 95 IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
D+++ + +D +++ +L+ +CK G A +LR++ + +P+ Y+ I +
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + M + P+V TY +I +++EA L ++M+ + PD
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+++N ++ C E+ A ++ M K+ V + TYN ++ V + ++AT V+ +
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT 334
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M +RG P V +YS+M++GLCK K ++EA F+ M + + P + T L + L+ G
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTK-MVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYG 393
Query: 305 FL----DIIEILADKMERSTSCTIQELANAM 331
+ D++ + ++ + + T L +A+
Sbjct: 394 RISDAWDLVNEMHNRGQPADVITYSSLLDAL 424
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 1 MVEFGIKPSIYDLDQLL--HALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
M++ G+ +I + L+ + L K+++ K F A+ TP V++YSI++ GL
Sbjct: 300 MIKQGVDSNIVTYNSLMDGYFLVKQEN-KATFVFNTMARRGVTPDVQSYSIMINGLCKTK 358
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA LF EM + + + +NSL++ + K G I +A ++ EM + G D +YS
Sbjct: 359 MVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYS 418
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ A C+ + + ++ +K + PN++TY ++ LCKN ++++A + +++ +
Sbjct: 419 SLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIK 478
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G + D YN ++ C + AL L+++M +PD TY +++ L + D+A
Sbjct: 479 GYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKA 538
Query: 239 TEVWESMEKRG 249
++ M +G
Sbjct: 539 VKLLREMIVQG 549
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 2/281 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
IKP +Y + L+ LCK +K A K + TY+ L+ G V + ++A
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+F+ M R D+ +++ ++ +CK +DEA + +EM S P+ +Y+ I
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ I + +++ M +V TY+ ++ LCKN +V++A L+ ++ ++G P+
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNI 449
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y ++ C + A + + + D YN+++ L + G FD A +
Sbjct: 450 YTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSK 509
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
ME G P TY +V L + K ++A K M+ +G
Sbjct: 510 MEDNGCIPDAVTYETLVRALFEND-KNDKAVKLLREMIVQG 549
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 57 VGELSEARKLFDEMLERKCPVD-ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+ + +A F+ +L + PV I N +L ++ K + A ++M +PD F
Sbjct: 41 IDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLF 100
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+++I I+ FC ++ F VL + + P+ T +I+ LC N KV EA D++
Sbjct: 101 TFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDV 160
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
I +G + D+ SY ++ C E AL+++ ++ V P+ YN ++ L +
Sbjct: 161 IAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLV 220
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A+++ M + +P V TY+ +++G C G+L+EA F M+ + I P T +
Sbjct: 221 IHASDLCSEMIVKRIFPDVVTYTTLIYG-CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNI 279
Query: 296 LRNRL 300
L + L
Sbjct: 280 LVDGL 284
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+ P + +++ LCK K V A F + P TY+ L+ GL G
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMC----------------------------- 90
+S+A L +EM R P D++ ++SLL+A+C
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 91 ------KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
K G + +A + +++ G D Y++ ++ C+ ++ M+
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+P+ TY ++R L +N+K ++A +LL EMI +G+
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGS 550
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 6/312 (1%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLF 67
S Y + L+HALC+R V A D P V TY+IL++ +A +L
Sbjct: 162 SAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELI 221
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
D M C + + +N +++AMC+ G++D+A +L + S G +P+ +Y+ + FC
Sbjct: 222 DFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSI 281
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+LD M R N PN T N II LC+ +++ L++M + G + +Y
Sbjct: 282 ERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTY 341
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
NA+++ C++ V+ AL L++ M PD TYN VLK L R++ A E+ M +
Sbjct: 342 NAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 401
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG--- 304
P ST++ ++ C +KG + +A + F+ M ++G P S+T + L G
Sbjct: 402 NDRLPDNSTFNTIISFWC-QKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKME 460
Query: 305 -FLDIIEILADK 315
L+++ +A+K
Sbjct: 461 QALELLNEMANK 472
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 3/281 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P + ++L+ LC+R A + + E T TY LV G G L +AR++
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVVEACGPEAT--AATYGALVDGYCRAGLLEDARRVV 151
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
M AHN L+ A+C+ G + +A +L M G PD +Y+I + A C+
Sbjct: 152 GGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKG 211
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
++D M+ PN TYN II +C+ V++A +LL+ + RG P+ +Y
Sbjct: 212 RGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNY 271
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N +L C A ++ M +EN P+ T N+++ L R G + T E M K
Sbjct: 272 NTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSK 331
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G +V TY+ ++ G+C ++G ++ A + M G P
Sbjct: 332 HGCTANVVTYNAVISGMC-EQGNVDSALELLSNMQSFGCKP 371
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 152/312 (48%), Gaps = 4/312 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + ++ A+C+ V A + ++ P Y+ +++G + +A
Sbjct: 228 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDA 287
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ DEM+ CP + N ++ +C+ G + + L +M G + +Y+ I
Sbjct: 288 DEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISG 347
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
CE ++ S +L +M+ + P++ TYN +++ LC ++ E+A +L+ +M + PD
Sbjct: 348 MCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPD 407
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N I+++ C + + A + +M ++ P+ TY+ ++ L + G+ ++A E+
Sbjct: 408 NSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLN 467
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +GF + Y V+ L K+ K+EE + + D GI P + + L
Sbjct: 468 EMANKGFN-TDKMYRVLTESL-NKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRN 525
Query: 304 GFLD-IIEILAD 314
G D I++LAD
Sbjct: 526 GKTDYAIDVLAD 537
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV P+ L+ +++ LC++ ++ + + +KH T V TY+ ++ G+ + G
Sbjct: 294 MVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGN 353
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M C DI+ +N++L+ +C A ++A ++ +M PD +++
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNT 413
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ I F V M PN TY+ II L K K+E+A +LL+EM +G
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D+ Y + ++ ++++ ++ + P YN VL L R G+ D A
Sbjct: 474 FNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAI 532
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
+V M G P STY +++ GL
Sbjct: 533 DVLADMVSCGCMPDESTYIILIEGL 557
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++ S+Y D L+ C++ ++ A + + PTV TY+ ++ GL G
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGR 322
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+ARKL D M+ + D++++N+L+ + GNI EA + E+R P +Y+
Sbjct: 323 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNT 382
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C D+ R+ D M ++ P+VFT+ +R CK + A +L DEM+ RG
Sbjct: 383 LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG 442
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y + + + A + M PD TYN+ + L ++G A+
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E+ + M G P TY+ ++H G L +A F M+ +GI P T +L
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHL-MAGHLRKARALFLEMLSKGIFPSVVTYTVL 558
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 41/333 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE GI P++ + +L + CK+ V+ A Q F +P TY++LV GL GE
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A++L +ML V + ++ L+ C+ G I+EA + EM S GA P +Y+
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPN------------------------------- 148
++ C+ + ++LD M NL+P+
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 149 ----VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
V TYN +I LC+ ++ A +L DEMI+ G +PD +++ + C + MA
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + PDR Y + +++G +A + E M RGF P + TY+V + GL
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
K G L+EA + + M+ G+ P Y+S +
Sbjct: 493 -HKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 167/367 (45%), Gaps = 41/367 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ + +++ LCK V A + D P + +Y+ L+ G +G
Sbjct: 298 MLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 357
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF E+ R ++ +N+L++ +C+ G++D A + EM G +PD F+++
Sbjct: 358 IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTT 417
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVF----------------------------- 150
F+ FC+ ++ + D M L P+ F
Sbjct: 418 FVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG 477
Query: 151 ------TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
TYN I L K ++EA +L+ +M+ G PD +Y +I+ H + A
Sbjct: 478 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 537
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + + P TY +++ GR A + M ++G +P+V TY+ +++GL
Sbjct: 538 ALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERST--- 320
CK + K+++A +F M +GI P T +L N LG + + + + D ++R
Sbjct: 598 CKVR-KMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656
Query: 321 SCTIQEL 327
SCT + L
Sbjct: 657 SCTHRSL 663
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 160/307 (52%), Gaps = 5/307 (1%)
Query: 13 LDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSEARKLFDEM 70
LD LL K+ + K F+ P VK + ++R L D + AR++++ M
Sbjct: 134 LDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVM 193
Query: 71 LE-RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
+E CP ++ +N++L++ CK G + EA +L +M+++G P+ +Y++ ++ + +
Sbjct: 194 VECGICPT-VVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
+ ++ M R L +V+TY+ +IR C+ ++EEA +L +EM+ RGA P +YN
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
I+ C V+ A +L+ M +N+MPD +YN ++ R+G A ++ + R
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
PSV TY+ ++ GLC + G L+ A + + M+ G P T +G L +
Sbjct: 373 LAPSVVTYNTLIDGLC-RLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMA 431
Query: 310 EILADKM 316
+ L D+M
Sbjct: 432 KELFDEM 438
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P ++HA H++ A F + P+V TY++L+ G
Sbjct: 508 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A F EM E+ +++ +N+L+ +CK +D+A+ EM++ G P+ ++Y+I
Sbjct: 568 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTI 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
I+ C R+ M + P+ T+ +++ L K+ K+
Sbjct: 628 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL 673
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI PS+ L+H+ R +K+A FF+ + P V TY+ L+ GL V +
Sbjct: 543 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 602
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F EM + + + L+ C G+ EA + ++M +PD+ ++
Sbjct: 603 MDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRS 662
Query: 120 FIHAFCEANDIHSV 133
+ + +H V
Sbjct: 663 LLKHLNKDYKLHVV 676
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMI----ERGA----NPDEWSYNAI-------LAYH 194
+Y+ I+ L +N + AY ++++++ E G + E S ++ L +
Sbjct: 82 ISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIY 141
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV-RVGRFDRATEVWESMEKRGFYPS 253
++ + L + +M + ++PD N VL+LL R D A EV+ M + G P+
Sbjct: 142 VKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPT 201
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII-EIL 312
V TY+ M+ CKK G ++EA + M G P T +L N L G ++ E++
Sbjct: 202 VVTYNTMLDSFCKK-GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI 260
Query: 313 ADKMERSTSCTIQELANAMRG 333
D + ++ +RG
Sbjct: 261 QDMLRLGLEVSVYTYDPLIRG 281
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS++ + L+++LCK A F + + TYSIL+ G+L A
Sbjct: 361 GAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTA 420
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+M+ + + +NSL+ CK GN+ A EM G +P SY+ I
Sbjct: 421 IHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISG 480
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C +H FR+ M + PN +T+ +I L + ++ +A++L DEM+E+ P+
Sbjct: 481 YCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPN 540
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E +YN ++ HC A L+ +M ++ ++PD +TY ++ L GR A + +
Sbjct: 541 EVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFID 600
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + F + YS ++HG C K+G+L +A MV G+
Sbjct: 601 DLHREHFKLNEMCYSALLHGYC-KEGRLRDALGVCREMVKRGV 642
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 35/341 (10%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ + C+R + A F TV Y+ L+ G +G LS A FDEM+++
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++++ SL+ C G + EA + EM G P+ ++++ I A AN + F
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
R+ D M N++PN TYN +I CK +A++LL++M+++G PD ++Y +++
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V A + I + +E+ + Y+ +L + GR A V M KRG +
Sbjct: 587 CSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646
Query: 255 STYSVMVHGLCK----------------------------------KKGKLEEACKYFEM 280
Y+V++ G K K G +++A +++
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
M+DEG P T L N L G +D E+L +M S S
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS 747
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G+ S L+ LCK + +V D + F PT S LV GL G+
Sbjct: 287 LIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGK 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L + + + + +N+L+ ++CK G DEA + +EM G + +YSI
Sbjct: 347 VVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSI 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +FC + + L M + V+ YN +I CK + A DEMI++G
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SY ++++ +C++ +++ A RL MT + + P+ +T+ ++ L R R A
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M ++ P+ TY+VM+ G C K+G +A + MV +G+ P + T L +
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHC-KEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
Query: 300 LVGLG 304
L G
Sbjct: 586 LCSTG 590
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 147/300 (49%), Gaps = 2/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
++ GI+P IY ++ + C+ K+ A + + V Y++L+ GL +
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS-DLNVVVYNVLIHGLCKNKRV 277
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA ++ + ++++ + + +L+ +CK + G++ EM +G P + S
Sbjct: 278 WEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSL 337
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + F +++ +K+ +P++F YN +I LCK+ K +EA L EM E+G
Sbjct: 338 VEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGL 397
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
++ +Y+ ++ C R +++ A+ + +M + + YN ++ ++G A
Sbjct: 398 CANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M +G P+V +Y+ ++ G C KGKL EA + + M +GI P + T L + L
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYC-NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISAL 516
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 143/297 (48%), Gaps = 11/297 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLG 55
M++ G+KP++ L+ C + + A + + HE T P T++ L+ L
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY----HEMTGKGIAPNTYTFTTLISALF 517
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+++A +LFDEMLE+ + + +N ++E CK GN +A +L +M G PD +
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+Y I + C + + +D + R + N Y+ ++ CK ++ +A + EM
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
++RG + D Y ++ + + L+ M + + PD+ Y ++ + G
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA-CKYFEMMVDEGIPPYSS 291
+A +W+ M G P++ TY+ +++ LC K G +++A + EM+V P + +
Sbjct: 698 KKAFGIWDIMIDEGCTPNIVTYTTLINELC-KAGLMDKAELLWKEMLVSNSTPNHVT 753
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 7/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E + P+ + ++ CK + A + + + P TY L+ L G
Sbjct: 532 MLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGR 591
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+K D++ ++ + +++LL CK G + +A G+ REM G + D Y++
Sbjct: 592 VCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAV 651
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + D +VF +L +M L P+ Y +I K V++A+ + D MI+ G
Sbjct: 652 LIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG 711
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C ++ A L M N P+ TY L L R G ++A
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAV 771
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
++ M K G + +Y+++V G C K G++EEA K + M+D I P YS+ +
Sbjct: 772 QLHNDMLK-GLLANTVSYNILVRGFC-KLGRVEEATKLLDEMIDNAIFPDCITYSTII 827
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P Y+ ++ G G + +A ++D M++ C +I+ + +L+ +CKAG +D+A +
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+EM + P+ +Y F+ + ++ + M + L+ N +YN ++R CK
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCK 797
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+VEEA +LLDEMI+ PD +Y+ I+ C R ++ A+ M + + PD
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
YN ++ G +A E+ + M +RG P+ +T+ + HG +K
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRK 903
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 51/294 (17%)
Query: 62 EARKLFDEML----ERKCPV--DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+ +++FD +L R+C + + +L + K +D + E+ S+G PD +
Sbjct: 170 QEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIY 229
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL---- 171
Y I +FCE + ++ M+ +L NV YN +I LCKN++V EA ++
Sbjct: 230 IYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGL 287
Query: 172 -------------------------------LDEMIERGANPDEWSYNAILAYHCDRAEV 200
+DEMIE G P E + ++++ + +V
Sbjct: 288 IQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKV 347
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A L+ R+ K MP YN ++ L + G+FD A +++ M ++G + TYS++
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSIL 407
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIP----PYSSTVE---MLRNRLVGLGFLD 307
+ C ++GKL+ A + M+ GI PY+S + L N + F D
Sbjct: 408 IDSFC-RRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD 460
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+ + + I ++ + + + M++ L+P V T ++ L K +V+ L
Sbjct: 158 SLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFG 217
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
E++ G PD + Y A++ C+ A +I RM ++ + YN+++ L +
Sbjct: 218 EILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNK 275
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----Y 289
R A E+ + ++G S TY +V GLCK + + E + M++ G P
Sbjct: 276 RVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ-EFEVGAGVMDEMIELGFVPTEAAL 334
Query: 290 SSTVEMLRNR 299
SS VE LR +
Sbjct: 335 SSLVEGLRRK 344
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 154/312 (49%), Gaps = 2/312 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P ++ + L+H LCK A + D + + P + TYS L+ G +A
Sbjct: 346 GCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 405
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R + D+M + ++ +N ++ A+ K G +DEA +++EM+S G +PD +Y+ I+
Sbjct: 406 RAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYH 465
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + + ++ +V N TYN +I L + + +E +L +EM+ G D
Sbjct: 466 LCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLD 525
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN ++ C V+ ++ L+ M + + P+ +YNM++ L + G+ A E+ +
Sbjct: 526 VVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSK 585
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +G P + TY+ +++GLC K G A E + +E + P T +L + +
Sbjct: 586 EMLNQGLTPDIVTYNTLINGLC-KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 644
Query: 304 GFLDIIEILADK 315
LD +L DK
Sbjct: 645 RLLDDASMLLDK 656
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 33/336 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGL----- 54
M+ G + + ++ LC HV+ A + D H TP+V TY L+RGL
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQ 300
Query: 55 --------GDV------------------GELSEARKLFDEMLERKCPVDILAHNSLLEA 88
G V G+L+ A +L++ M + CP D+ +N L+
Sbjct: 301 ADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHG 360
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+CK G A ML EM G P+ +YS +H+FC +LD M N
Sbjct: 361 LCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMN 420
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
YN II L K+ K++EA +L+ EM +G PD +YN I+ + C+ +++ A +
Sbjct: 421 SQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG 480
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ +E V+ + TYN ++ L+ GR+ + M G V +Y+ ++ LC K+
Sbjct: 481 NLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALC-KE 539
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
G ++ + E M+ +GI P + + ML N L G
Sbjct: 540 GNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAG 575
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%), Gaps = 1/228 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP I + +++ LC + A F N E TY+ L+ L G E
Sbjct: 451 GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEG 510
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM+ CP+D++++N L++A+CK GN+D + +L EM + G +P+ FSY++ I+
Sbjct: 511 LRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINE 570
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A + + M L P++ TYN +I LCK A LL+++ +PD
Sbjct: 571 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 630
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
+YN ++++HC ++ A L+ + ++P+ T+ M+++ VR
Sbjct: 631 IVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 36/303 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G P+I LLH+ C+ A D + F+ + Y+ ++ LG G+
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
L EA +L EM + C DI +N+++ +C +DEA
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496
Query: 99 --HGML------------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
H +L EM G D SY+ I A C+ ++ +L+ M
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PN F+YN +I +LCK KV +A +L EM+ +G PD +YN ++ C + AL
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ ++ ENV PD TYN+++ +V D A+ + + G P+ T+ +MV
Sbjct: 617 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676
Query: 265 CKK 267
++
Sbjct: 677 VRQ 679
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 7/291 (2%)
Query: 29 AHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLL 86
A D F TP+ ++Y+ ++ L ++A L+ ML + P
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
A+C+ G +A +LR M G PDA Y IHA + +LD M
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
+V T+N ++ LC V EA +L+D M+ G P +Y +L C + + A +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ R+ + NV+ N V++ + G+ RATE++E M +G P V TY++++HGLC
Sbjct: 308 LGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC- 362
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
K G+ A + + M ++G P T L + G D + D+M
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMS 413
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 33/313 (10%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ + ALC+ + A A+H P Y ++ L G ++EA
Sbjct: 176 VPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAA 235
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEML C D+ N ++ +C G++ EA ++ M G P +Y +
Sbjct: 236 TLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGL 295
Query: 125 CEANDIHSVFRVLDSMKRYNLV-------------------------------PNVFTYN 153
C + +L + N+V P+V TYN
Sbjct: 296 CRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYN 355
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
++ LCK + A ++LDEM E+G P+ +Y+ +L C + A ++ +M+ +
Sbjct: 356 ILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAK 415
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ YN ++ L + G+ D A + + M+ +G P + TY+ +++ LC +++E
Sbjct: 416 GFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNND-QMDE 474
Query: 274 ACKYFEMMVDEGI 286
A F +++EG+
Sbjct: 475 AEHIFGNLLEEGV 487
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG+ ++ LL LCK + VK A F + P +++ LV G L
Sbjct: 286 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARML 345
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +EM + ++ + SL+EA C + + +L EMR P+ +Y+I
Sbjct: 346 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 405
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A D +K + P+ YN +I L + ++E+AY +++EM G
Sbjct: 406 MHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGI 465
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N +++ CD ++ AL+L+ +M +++ PD TY +LKL +
Sbjct: 466 APNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLF 525
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M ++ P STY+++V LC + GK+ ++C + E MV +G P T +++ +L
Sbjct: 526 LVCHMFRKDISPDFSTYTLLVSWLC-RNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 584
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+H CK + +K A + K H F+P+V TY+ LV +
Sbjct: 325 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 384
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM +R+CP +++ + L+ A+ KAG EA +++ G PDA Y+ I+
Sbjct: 385 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 444
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
A + + V++ M+ + PNV T+N +I C + + E A +LL +M E+ NPD
Sbjct: 445 GRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDI 504
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +L C R V + L L+ M ++++ PD TY +++ L R G+ ++ E
Sbjct: 505 KTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEE 564
Query: 245 MEKRGFYPSVSTYSVMVHGLCKK 267
M +GF P T+ +++ L K+
Sbjct: 565 MVSKGFAPKQETFDLVMEKLEKR 587
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ T + ++R L +EA F +M D A N LL+ +CK ++ A G+
Sbjct: 259 SLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVF 318
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+E+R PD S++ +H +C+A + ++ MK++ P+V TY ++ C
Sbjct: 319 QELRGT-IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCME 377
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + Y LLDEM +R P+ +Y ++ AL ++ ++ V PD Y
Sbjct: 378 KDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFY 437
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +L R GR + A V E M G P+V+T++ ++ C + E A K M
Sbjct: 438 NSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC-DHSQAENALKLLVKME 496
Query: 283 DEGIPP 288
++ P
Sbjct: 497 EQSCNP 502
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 151/328 (46%), Gaps = 37/328 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+KP+I + ++H C V+ A K + P TY L+ G+ G L EA
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNID--------------------------- 96
K+F+EM+++ + +N+L++ C GN+D
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Query: 97 --------EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
EA M++E++ G PDA +Y+I I+ +C + F + D M + P
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TY ++ L K +++EA L ++ G PD +NA++ HC + V A L+
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK 490
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + V PD T+N +++ R G+ + A E+++ M++RG P +++ ++ G ++
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY-SRR 549
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEML 296
G +++A + M+D G P T L
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 151/304 (49%), Gaps = 9/304 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
G K SI D L+ + C A + F K + PT++T + L+ +
Sbjct: 146 LGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEA 204
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L+ EM + + N ++ +CK G + +A + M + G +P+ +Y+ +H
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C + + + +L +MKR + P+ FTY +I +CK ++EEA ++ +EM+++G P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YN ++ C++ ++MA M K+ + P TYN ++ L R D A +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-- 296
+ ++++G P TY+++++G C + ++A + M+ GI P Y+S + +L
Sbjct: 385 KEIQEKGISPDAITYNILINGYC-RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Query: 297 RNRL 300
+NR+
Sbjct: 444 KNRM 447
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI P++ + L+HAL + A + + +P TY+IL+ G
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L DEML + SLL + K + EA + +++ S G PDA ++
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNA 471
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +++ F +L M R + P+ T+N I++ C+ KVEEA +L DEM RG
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD S+N +++ + R ++ A R+ M P TYN +++ L + D A
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
E+ + M +G P +TY ++ G+ K
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 35/323 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M IK S+Y + +++ LCK +K A F + + P + TY+ +V G G
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + M +K D + SL+ MCK G ++EA + EM G P A Y+
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ D M + + P + TYN +I L ++ +EA ++ E+ E+G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN ++ +C A A L M + P + TY +L +L + R A
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++++ + G P ++ ++ G C
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 267 -KKGKLEEACKYFEMMVDEGIPP 288
++GK+EEA + F+ M GI P
Sbjct: 512 CREGKVEEARELFDEMKRRGIKP 534
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
E GI P + L++ C+ + K A D PT KTY+ L+ L +
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA LF ++ D + N+L++ C N+ A +L++M + PD +++ +
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + + D MKR + P+ ++N +I + +++A+++ +EM++ G N
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFN 568
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
P +YNA++ C E ++A L+ M + + PD TY +++ + +V
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 43/258 (16%)
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N I +F L + + + ++ +I+ C + +EA++ M E+G P +
Sbjct: 129 TNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIET 188
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
N++L+ A L M + + +T+N+++ +L + G+ +A + ME
Sbjct: 189 CNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHME 248
Query: 247 KRGFYPSVSTYSVMVHGLCK----------------------------------KKGKLE 272
G P++ TY+ +VHG C K+G+LE
Sbjct: 249 TSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLE 308
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER----STSCTIQELA 328
EA K FE MV +G+ P + L + G LD+ D+M + T T L
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
Query: 329 NAMRGKTGFRKSRSEETE 346
+A+ F + R++E E
Sbjct: 369 HAL-----FMEQRTDEAE 381
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + ++ C+ V+ A + FD K P +++ L+ G G++ +A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ +EML+ +L +N+L++ +CK D A +L+EM S G PD +Y I
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Query: 125 CEAN 128
+ N
Sbjct: 617 AKVN 620
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVK----VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
GIKP + L+ +R +K V ++ D F PTV TY+ LV+GL E
Sbjct: 531 GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG---FNPTVLTYNALVQGLCKNQEG 587
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
A +L EM+ + D + +L+E + K DE
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVG 58
MV+ +KP+ L+H LCK VK A + + + PTV Y+ LV+ L +G
Sbjct: 178 MVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASLVKALCQIG 237
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
ELS A KL DE E K VD +++L+ ++ KAG +E +L EM G +PD +Y+
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYN 297
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I+ FC ND S +RVLD M L P+V +YN I+ L + +K EEA L ++M R
Sbjct: 298 VLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPRR 357
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +PD SY + C+ + A ++ M + P R L+ L G+ +
Sbjct: 358 GCSPDTLSYRIVFDGLCEGLQFEEAAAILDEMLFKGYKPRRDRLERFLQKLCESGKLEIL 417
Query: 239 TEVWESMEKRGFYPSVSTYSVMV-HGLCKK 267
++V SM RG +SVM+ +CK+
Sbjct: 418 SKVISSMH-RGNADDAKVWSVMIPTTMCKE 446
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 142/281 (50%), Gaps = 2/281 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY+IL+ G G +A KLFDEM+++K + +L+ +CK + EA M
Sbjct: 150 PDACTYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKM 209
Query: 102 LREMRSI-GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
++M + G P Y+ + A C+ ++ F++ D + + Y+ +I L
Sbjct: 210 KQDMLKVYGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLI 269
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + E ++L+EM E+G PD +YN ++ C + A R++ M ++ + PD
Sbjct: 270 KAGRSNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKPDVI 329
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+YNM+L +L R+ +++ AT ++E M +RG P +Y ++ GLC+ + EEA +
Sbjct: 330 SYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGL-QFEEAAAILDE 388
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
M+ +G P +E +L G L+I+ + M R +
Sbjct: 389 MLFKGYKPRRDRLERFLQKLCESGKLEILSKVISSMHRGNA 429
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S A +FDEM + +C + + NSLL + K G ++ L + G +PDA +Y+I
Sbjct: 100 SRALHMFDEMPQYRCQRTVKSLNSLLNTLLKCGEFEKMKERLSSIDEFG-KPDACTYNIL 158
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE-RG 179
IH + ++ D M + + P T+ +I LCKN +V+EA ++ +M++ G
Sbjct: 159 IHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDMLKVYG 218
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P Y +++ C E++ A +L + + D Y+ ++ L++ GR + +
Sbjct: 219 VRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVS 278
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ E M ++G P TY+V+++G C + E A + + MV++G+ P
Sbjct: 279 RILEEMSEKGCKPDTVTYNVLINGFCVENDS-ESAYRVLDEMVEKGLKP 326
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 144/288 (50%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ CK +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+E +L + M D+ ++ L+ +CK +D+A+ + EM G P++ S++
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCKN +++A L++EM +G
Sbjct: 248 IDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLMKEMQRDGYVP 414
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ + CK G I A + + G P S++ ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D++ FR+ ++M+ + P+V+TY+ +I LCK K+++A +L DEM++ G P+
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
S+ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ M
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 SMKGLKPDKITYTTLIDGSC-KEGDLETAFEYRKRMIKENI 342
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 127/257 (49%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +LFDEML+ + ++ +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 LDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ +++ M L P+ TY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLMKEMQRDGYVPSVVT 418
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 122/283 (43%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ C E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G + + +M+ G P V TYSV+++GLCK+ KL++A + F+
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKES-KLDDANELFD 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D G+ P S + L + G +D+ +EI + +S S
Sbjct: 231 EMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLS 273
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 170/352 (48%), Gaps = 21/352 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA---HQ--FFDNAKHEFT--PTVKTYSILVRG 53
M + G P + L+ LC ++ +A HQ D +++E P V TY+I+V G
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 54 LGDVGELSEARKLF----------DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
L VG EA++LF +EML++ D++ N L++ +CK G + EA +L
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M G PD +Y+ I FC D++S + SM P+V +YN +I K
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
KVEEA +L +EM+ G P+ +Y+++L +V+ A +L + M + + +TY
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+ L L + A +++ ++ F + + ++ GLCK GKLE A + FE + +
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKA-GKLETAWELFEKLSN 463
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT--IQELANAMRG 333
EG P T ++ + G +D +L KME + CT I MRG
Sbjct: 464 EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME-ANGCTPDIITYNTLMRG 514
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 132/267 (49%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+E GI P + + L+ C + A + F + + P V +Y++L+ G +
Sbjct: 286 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 345
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL++EML +++ ++SLL+ + AG +D+A + M++ G ++++Y I
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F+ C+ + + ++ +K N + NC+I LCK K+E A++L +++ G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ C +V+ A LI +M PD TYN +++ + +
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
++ M ++ P T S++V L K
Sbjct: 526 QLLHRMAQKDVSPDAITCSIVVDMLSK 552
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 22/249 (8%)
Query: 67 FDEMLERKCPVDILAH-NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F ++ R P L+ N LL + K + + + +MR G D + +I ++ C
Sbjct: 56 FFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLC 115
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
N + F + R PN+ TYN +I+ LC ++ EA +L M + G PD
Sbjct: 116 NVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVV 175
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKE------NVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ C +N+AL+L M + N P+ TYN+++ L +VGR D A
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235
Query: 240 EVWESMEKRGFYPS----------VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP- 288
+++E M+ +G P+ + T++V++ LC K+GK+ EA K +M++ GI P
Sbjct: 236 QLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLC-KEGKVIEAKKLLGVMIESGIVPD 294
Query: 289 ---YSSTVE 294
Y+S +E
Sbjct: 295 LVTYNSLIE 303
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 141/341 (41%), Gaps = 55/341 (16%)
Query: 21 CKRKHVKVAH--QFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV 77
CK +V H FF + TP++ +++ L+ GL + S+ L+++M
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D N LL +C + E + G P+ +Y+ I C + I R+
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 138 DSMKRYNLVPNVFTY-----------------------------------------NCII 156
M++ P+V TY N I+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 157 RKLCKNEKVEEAYQLL----------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
LCK + +EA QL +EM+++G PD ++N ++ C +V A +L
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M + ++PD TYN +++ VG + A E++ SM +G P V +Y+V+++G
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY-S 341
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
K K+EEA K + M+ G P T + L + G +D
Sbjct: 342 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M GI + Y L LCK + A + F K F ++ + L+ GL G+
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF+++ +++ + ++ C+ G +D+A+ ++++M + G PD +Y+
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM-IER 178
+ F E+N + V ++L M + ++ P+ T + ++ L K+EK +E LL I++
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570
Query: 179 GAN 181
G +
Sbjct: 571 GVD 573
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 138/273 (50%), Gaps = 11/273 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT------PTVKTYSILVRGL 54
MV+ +KP+ L+H LCK VK A + KH+ PTV Y+ L++ L
Sbjct: 178 MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM----KHDMLKVYGVRPTVHIYASLIKAL 233
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
+GELS A KL DE E K VD +++L+ ++ KAG +E +L EM G +PD
Sbjct: 234 CQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDT 293
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+Y++ I+ FC ND S RVLD M L P+V +YN I+ + +K EEA L ++
Sbjct: 294 VTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFED 353
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M RG +PD SY + C+ + A ++ M + P R L+ L G+
Sbjct: 354 MPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ ++V S+ RG +SVM+ +CK+
Sbjct: 414 LEILSKVISSLH-RGIAGDADVWSVMIPTMCKE 445
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY+IL+ G G +A KLFDEM+++K + +L+ +CK + EA M
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 102 LREMRSI-GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+M + G P Y+ I A C+ ++ F++ D + + Y+ +I L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K + E +L+EM E+G PD +YN ++ C + A R++ M ++ + PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+YNM+L + R+ +++ AT ++E M +RG P +Y ++ GLC+ + EEA +
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGL-QFEEAAVILDE 388
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
M+ +G P +E +L G L+I+ + + R +
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIA 429
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 3/250 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
PT + ++ G S A +FDEM + +C + + NSLL A+ K G +++
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
L + G +PDA +Y+I IH ++ ++ D M + + P T+ +I L
Sbjct: 139 ERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 160 CKNEKVEEAYQLLDEMIE-RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
CK+ +V+EA ++ +M++ G P Y +++ C E++ A +L + + D
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVD 257
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
Y+ ++ L++ GR + + + E M ++G P TY+V+++G C + E A +
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS-ESANRVL 316
Query: 279 EMMVDEGIPP 288
+ MV++G+ P
Sbjct: 317 DEMVEKGLKP 326
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 26 VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+K HQ + + P K +++L+ L + L A LF ++ E + +N L
Sbjct: 188 IKAFHQMLEFG---YEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNIL 244
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ A C + + A+ + +M G PD +YSI + C + + + VLD M
Sbjct: 245 IRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGY 304
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VP+ TYN ++ LC+ + EAY+LL +M G NPD +YN ++ C A +
Sbjct: 305 VPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQ 364
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M + +P+ +Y ++ L G+FD A + E M GF P +S Y +++ GLC
Sbjct: 365 ILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLC 424
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+GK+ EAC+ MM + + P+ ST +L R+
Sbjct: 425 -NEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRI 458
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 138/268 (51%), Gaps = 3/268 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M+EFG +P + LL L + K ++ A F HEF +P +TY+IL+R
Sbjct: 194 MLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKL-HEFGISPNTRTYNILIRAHCHSD 252
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+LS A LF++M ++ C D+ ++ L++ +C+ + A G+L EM + G PDA +Y+
Sbjct: 253 KLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYN 312
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+++ C ++ +R+L MK P+V YN +I C+ + +A Q+L +M E
Sbjct: 313 TLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPEN 372
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ SY ++ C+ + + A + M +P Y++++ L G+ A
Sbjct: 373 GCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEA 432
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCK 266
EV M K+ P ST+SV++ +C+
Sbjct: 433 CEVLVMMTKQTLAPHESTWSVLLMRICE 460
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
G K S L+ L + + K + + P T + ++ G+VG +EA
Sbjct: 128 GFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEA 187
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F +MLE N LL + + ++ A + +++ G P+ +Y+I I A
Sbjct: 188 IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRA 247
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C ++ + + + + M + +P+V TY+ +++ LC+ +V+ A +LDEM+ +G PD
Sbjct: 248 HCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPD 307
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C + + A RL+++M PD YN V+ R GR A ++
Sbjct: 308 ALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILR 367
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + G P+ +Y +V+GLC + GK +EA + E M+ G P+ S +L L
Sbjct: 368 DMPENGCLPNALSYRTLVNGLCNE-GKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNE 426
Query: 304 G 304
G
Sbjct: 427 G 427
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 3/282 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+A + F+ A + F + TY L+ LG + L +M + CP +
Sbjct: 115 LAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDI 174
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+E + G +EA +M G EP A +++ + E + + + + + +
Sbjct: 175 IEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGI 234
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
PN TYN +IR C ++K+ AY L ++M ++G PD +Y+ ++ C +++V AL
Sbjct: 235 SPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALG 294
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M + +PD TYN +L L R A + M+ G P V Y+ ++ G C
Sbjct: 295 VLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFC 354
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
++G+ +AC+ M + G P + + L N L G D
Sbjct: 355 -REGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFD 395
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ LC++ VK A D ++ + P TY+ L+ L L EA
Sbjct: 268 GCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREA 327
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +M C D++ +N+++ C+ G +A +LR+M G P+A SY ++
Sbjct: 328 YRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNG 387
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C ++ M +P++ Y+ +I LC KV EA ++L M ++ P
Sbjct: 388 LCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPH 447
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
E +++ +L C+ ++ A L+ ++++++
Sbjct: 448 ESTWSVLLMRICEDSQTE-ARELVDKLSEDD 477
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G+ P+ + L+H CK K +K A + + P V TY+ +VRGL D G+
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +L D+M K D++ +N+L++ + D A ++ EM++ G + + +++I
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC I V+ M P+ FTYN +I CK K+ EAY+++DEM +G
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++ N +L C +++ A L + K + D TY ++ + + DRA
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++WE M++ G ++ TY+ ++ GLC GK ++A ++++G+ P ST ++
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLC-LSGKTDQAVDKLNELLEKGLVPDESTSNII 567
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 5/300 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRK--HVKVAHQ--FFDNAKHEFTPTVKTYSILVRGLGD 56
M +P++ + LL+AL + H V + F D K P V T++IL+ G
Sbjct: 164 MKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCS 223
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
EA +L ++M E C D + +N++L A+CK + + +L +M++ G P+ +
Sbjct: 224 DNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNT 283
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+I +H +C+ + V++ M ++P+V+TYN ++R LC K++EA +L D+M
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKME 343
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
PD +YN ++ + + A +L+ M V + T+N+++K G+ D
Sbjct: 344 SFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKID 403
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A+ V M + GF P TY+ M++G C K GK+ EA K + M +G+ + T+ L
Sbjct: 404 EASNVMVKMVESGFSPDCFTYNTMINGYC-KAGKMAEAYKMMDEMGRKGLKLDTFTLNTL 462
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M G+ P ++ + ++ LC + A + D + + P V TY+ L+ G +
Sbjct: 307 MTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRG 366
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A KL +EM R + + HN +++ C G IDEA ++ +M G PD F+Y+
Sbjct: 367 SDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNT 426
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+A + ++++D M R L + FT N ++ +C +++++AY L + +RG
Sbjct: 427 MINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRG 486
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
DE +Y ++ + + + AL+L M + ++ TYN +++ L G+ D+A
Sbjct: 487 YILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAV 546
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + ++G P ST ++++HG C +G +E+A ++ MV+ + P T +L
Sbjct: 547 DKLNELLEKGLVPDESTSNIIIHGYC-WEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605
Query: 300 LVGLGFLD 307
L G L+
Sbjct: 606 LCREGMLE 613
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 13/294 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+K + L+ LLH +C K + A+ A K + TY L+ G + A
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL++EM E I+ +N+++ +C +G D+A L E+ G PD + +I IH
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHG 570
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C + F+ + M ++L P++FT N ++R LC+ +E+ L + I +G D
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA----- 238
+YN I++ C + A L+T M +N+ PDR+TYN ++ L + GR + A
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLAL 690
Query: 239 --TEVWESMEKRGFYPSVST----YSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
E + ++ + P + T YS + LC +GK ++A K F+ +G+
Sbjct: 691 KFAEKGQQVKTQDTSPELGTSDMMYSEQISSLC-TQGKYKDAMKLFQQAEQKGV 743
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 1/276 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F+P TY+ ++ G G+++EA K+ DEM + +D N+LL MC +D+A+
Sbjct: 417 FSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAY 476
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ + R G D +Y I + + ++ + MK +V + TYN IIR L
Sbjct: 477 TLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGL 536
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C + K ++A L+E++E+G PDE + N I+ +C V A + +M + ++ PD
Sbjct: 537 CLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDI 596
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
T N++L+ L R G ++ ++ + +G TY++++ CK++ +LE+A
Sbjct: 597 FTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER-RLEDAFDLMT 655
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
M + + P T + L G + E LA K
Sbjct: 656 EMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALK 691
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 148/310 (47%), Gaps = 5/310 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGL---GDVGELSEARKLFD 68
LD L A K + HQ F+ K F P + T + L+ L L +R++F
Sbjct: 141 LDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQ 200
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
+ ++ ++ N L+ C N +EA ++ +M G PD +Y+ + A C+ +
Sbjct: 201 DAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRS 260
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+ V +L MK L PN TYN ++ CK + ++EA ++++ M +G PD W+YN
Sbjct: 261 QLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYN 320
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ CD +++ A+RL +M ++PD TYN ++ D A ++ E M+ R
Sbjct: 321 TMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKAR 380
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
G + T+++M+ C + GK++EA MV+ G P T + N G +
Sbjct: 381 GVKENGVTHNIMIKWFCTE-GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAE 439
Query: 309 IEILADKMER 318
+ D+M R
Sbjct: 440 AYKMMDEMGR 449
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 80/198 (40%), Gaps = 45/198 (22%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE +KP I+ + LL LC+ G L
Sbjct: 587 MVEHSLKPDIFTCNILLRGLCRE----------------------------------GML 612
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ LF+ + + P+D + +N ++ + CK +++A ++ EM EPD ++Y+
Sbjct: 613 EKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAI 672
Query: 121 IHAFCEANDIHSVFRVL-------DSMKRYNLVPNVFT----YNCIIRKLCKNEKVEEAY 169
+ +A ++ +K + P + T Y+ I LC K ++A
Sbjct: 673 VTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAM 732
Query: 170 QLLDEMIERGANPDEWSY 187
+L + ++G + ++++Y
Sbjct: 733 KLFQQAEQKGVSLNKYTY 750
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 148/303 (48%), Gaps = 5/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P++ + + LCKR++VK A H + P V T++ L+ GL +G
Sbjct: 234 MLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGW 293
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
A +LF ++++ ++ + ++ C+ G + A +L M G +P+ +Y+
Sbjct: 294 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYT 353
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ F +++ MK+ +PN++TYN +I CK K++EAY++L +
Sbjct: 354 TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQ 413
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G D+ +Y ++ HC + + AL L RM + PD Y ++ + + + +
Sbjct: 414 GLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEES 473
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ ++ G P+ TY+ M+ G C K G+ A + FE MV G ++ ++ M N
Sbjct: 474 QKFFDKCLMIGLLPTKQTYTSMIAGYC-KVGRSTMALRVFERMVQNGC--FADSILMCSN 530
Query: 299 RLV 301
+V
Sbjct: 531 NVV 533
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 3/296 (1%)
Query: 29 AHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLE 87
A + FD + P +++ LV G++ E L M +D ++
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 216
Query: 88 AMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
++C+ G + R M +G P+ +Y+ +I C+ + F VL+ M L P
Sbjct: 217 SLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 276
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-NPDEWSYNAILAYHCDRAEVNMALRL 206
NV+T+ +I LCK E A++L ++I+ + P+ +Y ++ +C ++ A L
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 336
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ RM ++ + P+ +TY ++ + G FDRA E+ M++ GF P++ TY+ ++ G CK
Sbjct: 337 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 396
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
K GK++EA K M +G+ T +L G + L D+M + C
Sbjct: 397 K-GKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 451
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
+V G+ G L EA + EM P+ + N +L + G+ A + M G
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD S+ + C + V +L +M RY + T ++R LC+ + ++
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ M+E G P+ +Y A + C R V A ++ M + P+ +T+ ++ L
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288
Query: 230 VRVGRFDRATEVWESMEKRGFY-PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++G +RA ++ + K Y P+V TY+VM+ G C ++GKL A MV++G+ P
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYC-REGKLARAEMLLVRMVEQGLKP 347
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMER 318
++T L G D L +KM++
Sbjct: 348 NTNTYTTLIGGHCKGGSFDRAFELMNKMKQ 377
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 146/316 (46%), Gaps = 2/316 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
V+ G+K Y LL+ LCK + A + T Y+ L+ G +G+L
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A +F +M R D + +N+L+ + K I EAH ++ EM G P +++
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A+ A + F +L M+ L PNV +Y I+ CKN K+ EA +LD+M +
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDV 499
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P YNAI+ + + + A L +M V P TYN+++K L + + A E
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ +S+ G P V +Y+ ++ C + + A + + M GI P T ML + L
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRS-NTDRALELEKEMWKCGIKPSPRTYRMLFSSL 618
Query: 301 VGLGFLDIIEILADKM 316
G G + +E L +M
Sbjct: 619 GGAGRVHEMENLYQQM 634
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+P + L++ L K + + AH + K+ P+V+T++ L+ G G+L +
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCF 453
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +M E+ +++++ S++ A CK G I EA +L +M P A Y+ I A+
Sbjct: 454 IILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
E F + + MK + P++ TYN +I+ LCK ++ EA +LLD + G PD
Sbjct: 514 IECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN +++ C R+ + AL L M K + P TY M+ L GR +++
Sbjct: 574 ISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQ 633
Query: 245 MEKRGFYPSVSTYSVMV--HGLCKKKGKLEEACKYFEMMVDEGI 286
M + P Y++MV + C ++ K+E K M D+GI
Sbjct: 634 MLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKE---MSDKGI 674
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 146/324 (45%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+KP++ + LL LC+ + D A + P TYSIL G G+
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LF+E +++ + + LL +CK G I +A +L+ + + G Y+
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL-------- 171
I+ +C+ D+ F + MK + P+ TYN +I L K E++ EA+ L
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428
Query: 172 ---------------------------LDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
L +M E+G P+ SY +I+ C ++ A+
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
++ M ++V+P YN ++ + G D+A + E M+ G PS+ TY++++ GL
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK+ ++ EA + + + + G+ P
Sbjct: 549 CKQS-QISEAEELLDSLRNYGLAP 571
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 3/309 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P+ + + ++ L K A + FD + P TY+ ++ G G+L +L
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+ +ML +++ +N LL +C+AG + E +L EM S PD F+YSI
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D ++ + + + + +T + ++ LCK+ K+ +A ++L ++ G
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ +C ++ A + +M + PD TYN ++ L +V R A ++ ME
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-F 305
K G PSV T++ ++ + G+LE+ M ++G+ P + + N G
Sbjct: 426 KNGVNPSVETFNTLIDAY-GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKI 484
Query: 306 LDIIEILAD 314
L+ + IL D
Sbjct: 485 LEAVAILDD 493
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFS 116
G ++ R F+ ++ + D N ++A AG++DEA GMLR M GA P+AFS
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y++ I +A ++ D M +VPN TYN +I K +E ++L +M+
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G P+ +YN +L+ C + ++ M ++PD TY+++ R G
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E K+G T S++++GLC K GK+ +A + + +V+ G+ + L
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLC-KDGKISKAEEVLQTLVNSGLLQTTVIYNTL 369
Query: 297 RNRLVGLGFLD----IIEILADKMERSTSCTIQELANAM 331
N +G L+ I + + ++ R T L N +
Sbjct: 370 INGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G+KP++ +++A CK + A D+ + P + Y+ ++ + G
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L ++M P I+ +N L++ +CK I EA +L +R+ G PD SY+
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNT 578
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C ++ + M + + P+ TY + L +V E L +M+++
Sbjct: 579 LISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKD 638
Query: 180 ANPDEWSYNAIL 191
P YN ++
Sbjct: 639 VVPCSGIYNIMV 650
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 163/314 (51%), Gaps = 1/314 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++GI ++ L+ AL K V+ AH F K + ++++L+ G +L E
Sbjct: 270 KYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDE 329
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A K+ E+ + D++++ + +EA C+ + +L +M G +P+ +++I +H
Sbjct: 330 AWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMH 389
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A +A I+ +V + MK+ VP+ Y+ +I L K ++ + +++++M ++G P
Sbjct: 390 ALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTP 449
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +YN +++ C ++ AL L+ +M + + PD TY+ +LK+ R R +
Sbjct: 450 DVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLL 509
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M K TY+++V GLC + GKL AC +F M+ + + P ST +ML+ L
Sbjct: 510 DHMFKNDVSIEAGTYAILVRGLC-ENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELER 568
Query: 303 LGFLDIIEILADKM 316
L+ ++I+ + M
Sbjct: 569 KSMLEEMKIIENLM 582
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 14 DQLLHALCKRKHVKV--AHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDE 69
+ L+ L KR H A+ F AK + + + ++Y+ +V LG +L DE
Sbjct: 173 NTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDE 232
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE--- 126
M V + + ++ + +AG EA R + G D + ++ + A +
Sbjct: 233 MNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEAS 292
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D H+VFR L +NL ++N +I CK +K++EA++++ E+ + G PD S
Sbjct: 293 VEDAHNVFRELKCSIPFNLA----SFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVIS 348
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y A + HC + +++ +M + P+ T+ +++ L + + + A +V+E M+
Sbjct: 349 YTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMK 408
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
K G P S YS ++ L K G+L + + E M +G+ P
Sbjct: 409 KEGCVPDSSFYSSLIFIL-GKAGRLTDVKEIVEDMEKQGVTP 449
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E KP + LL C++K +KV D+ K++ + TY+ILVRGL + G+
Sbjct: 477 MEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGK 536
Query: 60 LSEARKLFDEMLER 73
L A F EML +
Sbjct: 537 LHLACSFFGEMLSK 550
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + + L+ LC A + K E P V T++ L+ G +SEA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++EM+ R DI+ ++ L+ +C +DEA M M S G PD +YSI I+
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + ++ M + +V N TY +I+ C+ K+ A ++ M+ G +P+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L CD ++ AL ++ M K + D TYN++++ + + G A +++
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
S+ +G P + TY+ M+ GL KKG EA F M ++GI P
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGL-YKKGLRREADALFRKMKEDGILP 499
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 1/267 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
FF + P++ +S L+ + + + L+++M P ++ N LL C+
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A L +M +G EP ++ ++ FC + ++ + D M PNV
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN II LCK+++V+ A LL+ M + G PD +YN++++ C + A R+++ MT
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + PD T+N ++ V+ GR A E +E M +R P + TYS++++GLC +L
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS-RL 307
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRN 298
+EA + F MV +G P T +L N
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILIN 334
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 142/275 (51%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI LL+ C+ V A FD + P V Y+ ++ GL +
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L + M + D++ +NSL+ +C +G +A M+ M PD F+++
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + M R +L P++ TY+ +I LC +++EA ++ M+ +G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ +C +V ++L M++ V+ + TY ++++ R G+ + A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E++ M G +P++ TY+V++HGLC GK+E+A
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLC-DNGKIEKA 415
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGE 59
MV+ PSI D +LL A+ K K V ++ + P + T +IL+ +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A +M++ I+ SLL C+ + +A M +M +G +P+ Y+
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + + +L+ M++ + P+V TYN +I LC + + +A +++ M +R
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++NA++ V+ A M + ++ PD TY++++ L R D A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +G +P V TYS++++G CK K K+E K F M G+ + T +L
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSK-KVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 300 LVGLGFLDIIEILADKM 316
G L++ E + +M
Sbjct: 371 YCRAGKLNVAEEIFRRM 387
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P ++ + L+ A K V A +F++ + P + TYS+L+ GL L EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++F M+ + C D++ ++ L+ CK+ ++ + EM G + +Y+I I +
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A ++ + M + PN+ TYN ++ LC N K+E+A +L +M + G + D
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN I+ C EV A + + + +MPD TY ++ L + G A ++
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 245 MEKRGFYPS 253
M++ G P+
Sbjct: 492 MKEDGILPN 500
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 120/238 (50%), Gaps = 1/238 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L ++ LF M++ + I + LL A+ K D + +M+ +G + + +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I ++ FC + + L M + P++ T+ ++ C+ ++V +A + D+M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ YN I+ C +V+ AL L+ RM K+ + PD TYN ++ L GR+ A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
T + M KR YP V T++ ++ C K+G++ EA +++E M+ + P T +L
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDA-CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P + L++ CK K V+ + F + ++ TY+IL++G G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A ++F M+ +I+ +N LL +C G I++A +L +M+ G + D +Y+I
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+A ++ + + S+ L+P+++TY ++ L K EA L +M E G
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Query: 180 ANPDE 184
P+E
Sbjct: 497 ILPNE 501
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 158/300 (52%), Gaps = 1/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G++ L++LL AL K + +++AH D K + +++IL+ G V
Sbjct: 272 MGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNF 331
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+ARK+ +E E D+ +N+ +E+ C + + +L EMR G P+A +Y+I
Sbjct: 332 EKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTIL 391
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + +A + + MK+ +VP+ Y+ ++ L K ++++A ++ D+M ++G
Sbjct: 392 LLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGV 451
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
D +YN +++ C ++ ALRL+ M + + PD TY+ +LK+ + R
Sbjct: 452 VRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKF 511
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M K P TY+++V L GKL EAC +FE MV +G P +TV++L +L
Sbjct: 512 LLDHMFKHDLCPDRGTYTLLVQSL-SNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKL 570
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 151/348 (43%), Gaps = 49/348 (14%)
Query: 29 AHQFFDNAKHEFTPTVKT---YSILVRGLGDVGELSEARKLFDEM--------LERKCPV 77
A+ FF AK + TP V + Y+++V LG E KL EM L+ V
Sbjct: 194 AYGFFIWAKKQ-TPYVHSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKV 252
Query: 78 ---------------------------DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
D A N LL+A+ K +I+ AH +L E +S
Sbjct: 253 MRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKS-SV 311
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ S++I I+ +C+ + +V++ K + P+VFTYN I C ++ + +
Sbjct: 312 PLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDE 371
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+L+EM G P+ +Y +L + +++ AL RM K+ ++PD Y+ ++ +L
Sbjct: 372 VLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILG 431
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR A EV++ M K+G V TY+ M+ C K E A + + M + P
Sbjct: 432 KAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTAC-AHSKEETALRLLKEMEETSCKPDL 490
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMERSTSCT--------IQELANA 330
T L + +++ L D M + C +Q L+N+
Sbjct: 491 QTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNS 538
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 163/307 (53%), Gaps = 7/307 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELS 61
+FG+ I + LL ALC+ K+V+ A Q ++ F K+++I++ G +V G +
Sbjct: 215 KFGV--GIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWCNVIGSMR 272
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA + + EM R D+++++S++ K N+++ + +M+ + PD Y+ +
Sbjct: 273 EAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDRKVYNAVV 332
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
HA +A+ + ++ +M+ + P+ TYN +I+ L + K+ EA ++ DEM++RG +
Sbjct: 333 HALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLS 392
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y+A EV M L+ +M + PD+ TY M+++ R + D ++
Sbjct: 393 PTIRTYHAFFRILKSGEEVFM---LLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKL 449
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
W M + G P S+Y V++HGL GKLEEA KY+ M ++ P T +ML+ +
Sbjct: 450 WSEMSENGVGPDRSSYIVLIHGLF-LNGKLEEAYKYYIEMKEKQFLPEPKTEDMLQAWIS 508
Query: 302 GLGFLDI 308
G D+
Sbjct: 509 GKETADV 515
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 45/249 (18%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF----SYSIFIHAFCEANDIHSVFRV 136
A++S++ + K D A ++ EMR G + + SI I +C +D+
Sbjct: 149 AYHSMISILGKMRKFDTAWALIDEMRG-GRTGTSLVTPHTLSIMIRRYCAVHDVGKAINT 207
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP-DEWSYNAILAYHC 195
+ K++ + + ++ LC+ + V++A QLL R P D S+N IL C
Sbjct: 208 FYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLL--FCNRNVFPFDTKSFNIILNGWC 265
Query: 196 D------RAE------------------------------VNMALRLITRMTKENVMPDR 219
+ AE +N L+L +M + + PDR
Sbjct: 266 NVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDR 325
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
YN V+ L + A + ++ME +G P TY+ ++ L + + K+ EA + F+
Sbjct: 326 KVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRAR-KINEAKEVFD 384
Query: 280 MMVDEGIPP 288
M+ G+ P
Sbjct: 385 EMLQRGLSP 393
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 163/341 (47%), Gaps = 12/341 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV +P++ L+ LCK V+ A F+ + P + YS L+ GL G
Sbjct: 132 MVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGR 191
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKL D M+ R P +A+ S++ +CK G I EA ++EMR P +YS
Sbjct: 192 VDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 251
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + F V++ M + P+ +Y I L + EEA ++ + M+E+G
Sbjct: 252 IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y I+ C + A ++ M K V P+R+ Y M++ V+ R + A
Sbjct: 312 CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEAL 371
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV--DEGIPPYSSTVEMLR 297
E+++ + K G PS TY+ +++ LCK K K++EA + M E + P T M+
Sbjct: 372 ELYQRILKDGILPSTVTYNTVINALCKLK-KMDEALELLREMQRRKEELEPSIVTYSMII 430
Query: 298 NRLVGLGFLD-IIEILADKMERST-------SCTIQELANA 330
+ L +G + ++LA+ ++ + IQ LA A
Sbjct: 431 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 471
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 42/345 (12%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLF 67
+L ALC R+ + A +F++ E P TY+ +V GL G + +
Sbjct: 70 ILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYY 129
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
++M+ KC +L + L++ +CKA ++ A + EM G +PD +YS I +A
Sbjct: 130 EKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKA 189
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ +++D M P Y I+ LCK +++EA + + EM R P +Y
Sbjct: 190 GRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 249
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
+ I+ + +V A ++ M + PD +Y M ++ L +GR + A +V+E+M +
Sbjct: 250 SFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 309
Query: 248 RGFYPSVSTYSVMVHGLCK----------------------------------KKGKLEE 273
+G P + TY +++ CK K +LEE
Sbjct: 310 KGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEE 369
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
A + ++ ++ +GI P + T + N L L +D L +M+R
Sbjct: 370 ALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQR 414
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A + P +Y++ + L +G EA K+F+ M+E+ C D+ + +++ CK G++
Sbjct: 273 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 332
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
A +LR M +P+ + Y++ + F +++ + + + + ++P+ TYN +
Sbjct: 333 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 392
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
I LCK +K++EA +LL EM R P +Y+ I+ A L+ M
Sbjct: 393 INALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN 452
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V+PD TY +++ L G+ RA E+ E M K G +P TY +V LC+ ++
Sbjct: 453 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS--DVDA 510
Query: 274 ACKYFEMMVDEGIPP 288
A + M+ G P
Sbjct: 511 AWDLLQEMMRNGHTP 525
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 45/317 (14%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
+ LL AL + + A FF ++ E P V +++IL+RG + L EM R
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISE--PNVSSFNILLRGFAARDDFEVVNALLREMKAR 58
Query: 74 KCPVDILAHNSLLEAMC------------------------------------------K 91
+ H +L A+C K
Sbjct: 59 GITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFK 118
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
AGN D +M + EP +Y++ + C+A+ + V + M R P++
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y+ +I L K +V+EA +L+D MI RG P +Y +I+A C + A++ I M
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P TY+ ++ + +G+ + A V E M R P +Y++ + L G+
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEAL-YSIGRR 297
Query: 272 EEACKYFEMMVDEGIPP 288
EEA K FE MV++G P
Sbjct: 298 EEAEKVFETMVEKGCKP 314
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGELS 61
GI PS + +++ALCK K + A + K E P++ TYS+++ GLG VG
Sbjct: 381 GILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEE 440
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A L EM++ D + SL++ + AG + A +L EM G PD +Y +
Sbjct: 441 RAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 500
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
C +D+ + + +L M R PN FT+ +
Sbjct: 501 QILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAV 533
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
PNV ++N ++R + E LL EM RG + ++ IL+ C R +++ A+
Sbjct: 27 PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86
Query: 207 ITRMTKENV-------MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
T+E PD TY ++ L + G +D E +E M P++ TY+V
Sbjct: 87 FNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTV 146
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+V GLCK K+E AC FE M+ +G P YSS ++ L
Sbjct: 147 LVDGLCKAH-KVERACDVFEEMIRKGHKPDIIAYSSLIDGL 186
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G
Sbjct: 130 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGH 189
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 190 LDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 249
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 250 LIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 309
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 310 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAE 369
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M G P T +L N
Sbjct: 370 KMLREMLSVGLKPDTGTYTMIINEFC-KKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 427
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ + H+ + P V TYS+L+ GL +
Sbjct: 165 ITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESK 224
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +LFDEML + + + +L++ CK G +D A + + M S PD +Y+
Sbjct: 225 MDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNT 284
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ FTY +I CK ++ A++ MI+
Sbjct: 285 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 344
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + PD TY M++ + G + +
Sbjct: 345 IRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGS 404
Query: 240 EVWESMEKRGFYPSVSTYSVMVHG 263
++ + M++ G PSV TY+V+++G
Sbjct: 405 KLLKEMQRNGHAPSVVTYNVLMNG 428
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ FR+ +M ++P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V+ A+ + RM ++++PD TYN ++ L + G +A ++ + M
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 306 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 345
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ LH+ C H HQ AK V
Sbjct: 7 PANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQR 66
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 67 SDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGF 126
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 127 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 186
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 187 LGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 246
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 247 FTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEM 305
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGDLD 331
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ K +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+E +L + M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEMI +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+++Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGYKP 414
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
++L L K K+ K+ F++ N + + ++ ++IL+ GE+ A+ +FD + +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW 165
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+++ N+L+ K G+++E + M++ G +PD ++YS+ I+ C+ + +
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ D M LVPN T+ +I CKN +V+ A ++ +M+ + +PD +YN ++
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + ++ A LI M + + PD+ TY ++ + G + A E + M K
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ GLC ++G+ +A K M+ G+ P T M+ N G + L
Sbjct: 346 DVAYTALISGLC-QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Query: 314 DKMER 318
+M+R
Sbjct: 405 KEMQR 409
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 127/257 (49%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML++ + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ FTY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLLKEMQRDGYKPSVVT 418
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ K +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+E +L + M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEMI +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+++Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWXGSKLLKEMQRDGYKP 414
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
++L L K K+ K+ F++ N + + ++ ++IL+ GE+ A+ +FD + +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW 165
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+++ N+L+ K G+++E + M++ G +PD ++YS+ I+ C+ + +
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ D M LVPN T+ +I CKN +V+ A ++ +M+ + +PD +YN ++
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + ++ A LI M + + PD+ TY ++ + G + A E + M K
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ GLC ++G+ +A K M+ G+ P T M+ N G + L
Sbjct: 346 DVAYTALISGLC-QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLL 404
Query: 314 DKMER 318
+M+R
Sbjct: 405 KEMQR 409
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 127/257 (49%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML++ + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ FTY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLLKEMQRDGYKPSVVT 418
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 120/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G + + +M+ G P V TYSV+++GLCK+ K+++A F+
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKES-KMDDANVLFD 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D+G+ P T L + G +D+ +EI + +S S
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 156/298 (52%), Gaps = 6/298 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYS--ILVRGLGDVGELSE 62
P + + LL+ L K +++A + +D V YS I+V+GL G+L E
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
RKL ++ + C +I+ +N+L++ CK G+++ A+G+ E++ G P +Y I+
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC+ D ++ R+L M L NV YN II K+ + +A + ++ MIE G P
Sbjct: 283 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 342
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +YN +++ C +V+ A +L+ + + +MP++ +Y ++ + G +DRA+
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 402
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M +RG P + TY +VHGL G+++ A E M++ G+ P + +L + L
Sbjct: 403 IEMTERGHKPDLVTYGALVHGLV-VAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G KP I + L+ C+ V A Q + A + P +Y+ L+ G
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A EM ER D++ + +L+ + AG +D A + +M G PDA Y+I
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +L M +++P+ F Y ++ +N ++EA +L + IE+G
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP YNA++ +C + A+ I RM K ++ PD TY+ V+ V+ D A
Sbjct: 515 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 574
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M K P+V TY+ +++G C +KG L + K F M G+ P T +L
Sbjct: 575 KMFREMVKMKCKPNVVTYTSLINGFC-RKGDLHRSLKIFREMQACGLVPNVVTYSIL 630
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ + L+HA CK+ + + ++ + + P + TY LV GL GE+ A
Sbjct: 374 GLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA 433
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++MLER D +N L+ +CK + A +L EM PDAF Y+ +
Sbjct: 434 LTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDG 493
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F ++ ++ + + P + YN +I+ CK +++A ++ M +R PD
Sbjct: 494 FIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD 553
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E++Y+ ++ + + +++ A ++ M K P+ TY ++ R G R+ +++
Sbjct: 554 EFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFR 613
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M+ G P+V TYS+++ C K+ KL +A +FE M+ P T L N
Sbjct: 614 EMQACGLVPNVVTYSILIGSFC-KEAKLIDAASFFEEMLMNKCVPNDVTFNYLVN 667
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 41/330 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGL---GDV--- 57
G P+I + L+ CK+ +++A+ F K + F PTV+TY ++ G GD
Sbjct: 234 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 293
Query: 58 -----------------------------GELSEARKLFDEMLERKCPVDILAHNSLLEA 88
G + +A + + M+E C DI+ +N+L+
Sbjct: 294 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 353
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
C+ G + EA +L + G P+ FSY+ IHA+C+ L M P+
Sbjct: 354 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 413
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ TY ++ L +V+ A + ++M+ERG PD YN +++ C + ++ A L+
Sbjct: 414 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 473
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M ++V+PD Y ++ +R G D A +++E ++G P + Y+ M+ G C K
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYC-KF 532
Query: 269 GKLEEACKYFEMMVDEGIPP----YSSTVE 294
G +++A M + P YS+ ++
Sbjct: 533 GMMKDAMACINRMKKRHLAPDEFTYSTVID 562
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 50/315 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P + L+ LCK+ + A + P Y+ LV G G
Sbjct: 440 MLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGN 499
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG-------------------------- 93
L EARKLF+ +E+ I+ +N++++ CK G
Sbjct: 500 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 559
Query: 94 ---------NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++D A M REM + +P+ +Y+ I+ FC D+H ++ M+
Sbjct: 560 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG 619
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL---AYHCDRA--- 198
LVPNV TY+ +I CK K+ +A +EM+ P++ ++N ++ + + RA
Sbjct: 620 LVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISE 679
Query: 199 --------EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ +M L RM + P YN +L L + G F A ++ M +G
Sbjct: 680 KGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGC 739
Query: 251 YPSVSTYSVMVHGLC 265
P ++ ++HG+C
Sbjct: 740 IPDSVSFVALLHGVC 754
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 14/330 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G KP + L+H L V VA + + P Y+IL+ GL +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 464
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A+ L EML++ D + +L++ + GN+DEA + G P Y+
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + ++ MK+ +L P+ FTY+ +I K ++ A ++ EM++
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + +++ +L++ M ++P+ TY++++ + + A
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK-------------KKGKLEEACKYFEMMVDEGI 286
+E M P+ T++ +V+G K ++ K +F M+ +G
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704
Query: 287 PPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P S+ + L G L++KM
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKM 734
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 15/248 (6%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G+ P I + ++ CK +K A + K P TYS ++ G +L
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A+K+F EM++ KC +++ + SL+ C+ G++ + + REM++ G P+ +YSI
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN------EKVEEAYQ---- 170
I +FC+ + + M VPN T+N ++ KN EK E +
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQS 690
Query: 171 ----LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
MI G P +YN+IL C AL+L +MT + +PD ++ +L
Sbjct: 691 MFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALL 750
Query: 227 KLLVRVGR 234
+ GR
Sbjct: 751 HGVCLEGR 758
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 5/197 (2%)
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
P++ A++SLL+ + ++ E +L MR P + SI I A+ ++ +
Sbjct: 91 PINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALE 150
Query: 136 VLD-SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE-RGANP---DEWSYNAI 190
+ +K Y P+V N ++ L K ++E A +L DEM+E GA D +S +
Sbjct: 151 LYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIM 210
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ C ++ +LI + +P+ YN ++ + G + A ++ ++ +GF
Sbjct: 211 VKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF 270
Query: 251 YPSVSTYSVMVHGLCKK 267
P+V TY +++G CKK
Sbjct: 271 LPTVETYGAIINGFCKK 287
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+ KP++ L++ C++ + + + F + P V TYSIL+ +
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAK 639
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN--IDEAHGMLRE------------M 105
L +A F+EML KC + + N L+ K G I E +E M
Sbjct: 640 LIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRM 699
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P + +Y+ + C+ + ++ + M +P+ ++ ++ +C +
Sbjct: 700 ISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRS 759
Query: 166 EE 167
+E
Sbjct: 760 KE 761
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 163/314 (51%), Gaps = 1/314 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
++GI ++ L+ AL K V+ AH F K + ++++L+ G +L E
Sbjct: 293 KYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDE 352
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A K+ E+ + D++++ + +EA C+ + +L +M G +P+ +++I +H
Sbjct: 353 AWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMH 412
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A +A I+ +V + MK+ VP+ Y+ +I L K ++ + +++++M ++G P
Sbjct: 413 ALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTP 472
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +YN +++ C ++ AL L+ +M + + PD TY+ +LK+ R R +
Sbjct: 473 DVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLL 532
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M K TY+++V GLC + GKL AC +F M+ + + P ST +ML+ L
Sbjct: 533 DHMFKNDVSIEAGTYAILVRGLC-ENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELER 591
Query: 303 LGFLDIIEILADKM 316
L+ ++I+ + M
Sbjct: 592 KSMLEEMKIIENLM 605
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 14 DQLLHALCKRKHVKV--AHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDE 69
+ L+ L KR H A+ F AK + + + ++Y+ +V LG +L DE
Sbjct: 196 NTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDE 255
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE--- 126
M V + + ++ + +AG EA R + G D + ++ + A +
Sbjct: 256 MNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEAS 315
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D H+VFR L +NL ++N +I CK +K++EA++++ E+ + G PD S
Sbjct: 316 VEDAHNVFRELKCSIPFNLA----SFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVIS 371
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y A + HC + +++ +M + P+ T+ +++ L + + + A +V+E M+
Sbjct: 372 YTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMK 431
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
K G P S YS ++ L K G+L + + E M +G+ P
Sbjct: 432 KEGCVPDSSFYSSLIFIL-GKAGRLTDVKEIVEDMEKQGVTP 472
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E KP + LL C++K +KV D+ K++ + TY+ILVRGL + G+
Sbjct: 500 MEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGK 559
Query: 60 LSEARKLFDEMLER 73
L A F EML +
Sbjct: 560 LHLACSFFGEMLSK 573
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG+ ++ LL LCK + VK A F + P +++ LV G L
Sbjct: 1547 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARML 1606
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +EM + ++ + SL+EA C + + +L EMR P+ +Y+I
Sbjct: 1607 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 1666
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A D +K + P+ YN +I L + ++E+AY +++EM G
Sbjct: 1667 MHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGI 1726
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N +++ CD ++ AL+L+ +M +++ PD TY +LKL +
Sbjct: 1727 APNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLF 1786
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M ++ P STY+++V LC + GK+ ++C + E MV +G P T +++ +L
Sbjct: 1787 LVCHMFRKDISPDFSTYTLLVSWLC-RNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 1845
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+H CK + +K A + K H F+P+V TY+ LV +
Sbjct: 1586 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 1645
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM +R+CP +++ + L+ A+ KAG EA +++ G PDA Y+ I+
Sbjct: 1646 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 1705
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
A + + V++ M+ + PNV T+N +I C + + E A +LL +M E+ NPD
Sbjct: 1706 GRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDI 1765
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +L C R V + L L+ M ++++ PD TY +++ L R G+ ++ E
Sbjct: 1766 KTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEE 1825
Query: 245 MEKRGFYPSVSTYSVMVHGLCKK 267
M +GF P T+ +++ L K+
Sbjct: 1826 MVSKGFAPKQETFDLVMEKLEKR 1848
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ T + ++R L +EA F +M D A N LL+ +CK ++ A G+
Sbjct: 1520 SLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVF 1579
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+E+R PD S++ +H +C+A + ++ MK++ P+V TY ++ C
Sbjct: 1580 QELRGT-IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCME 1638
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + Y LLDEM +R P+ +Y ++ AL ++ ++ V PD Y
Sbjct: 1639 KDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFY 1698
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +L R GR + A V E M G P+V+T++ ++ C + E A K M
Sbjct: 1699 NSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC-DHSQAENALKLLVKME 1757
Query: 283 DEGIPP 288
++ P
Sbjct: 1758 EQSCNP 1763
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P+ ++ LC + + A + D + + Y+ ++ G + G+
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGD 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR+ FDEM + D + + +++ +C+A ++EA +L+EM + + D +Y++
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + F++ ++M + + PNV TY + LCK V+ A +LL EM +G
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN+++ C + A+R + M + PD +TY ++ L + G DRA
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + M +G P++ TY+V+++G C G++E K + M+++ I P ++T L
Sbjct: 557 SLLQEMLDKGIKPTIVTYNVLMNGFC-MSGRVEGGKKLLDWMLEKNIHPNAATYNSL 612
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 142/258 (55%), Gaps = 5/258 (1%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY++L+ G G+++EA ++ + M++R +++ + +L + +CK G++ A+ +L EM
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G E +A +Y+ I+ C+A + R + M L P+V+TY +I LCK+ +
Sbjct: 493 SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDL 552
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ A+ LL EM+++G P +YN ++ C V +L+ M ++N+ P+ TYN +
Sbjct: 553 DRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSL 612
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+K TE+++ M R P+ +TY++++ G CK + ++EA + + M+ +G
Sbjct: 613 MKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKAR-NMKEALYFHDEMIQKG 671
Query: 286 I----PPYSSTVEMLRNR 299
YS+ + +L +
Sbjct: 672 FRLTATSYSALIRLLNKK 689
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 152/325 (46%), Gaps = 9/325 (2%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
LL ALC VK A Q FD P V TY IL+ G +GEL A KL DEM+
Sbjct: 265 LLKALCDAGRVKDARQLFDEMAS--APDVVTYGILIHGHCALGELENAVKLLDEMVAGGV 322
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+ + S++ +C G I +A ++ +M D Y+ + FC D+ S R
Sbjct: 323 EPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARR 382
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
D M+R L + TY +I LC+ ++EEA +LL EM R + DE +Y ++ +C
Sbjct: 383 WFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYC 442
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
R ++ A ++ M + V P+ TY + L + G A E+ M +G +
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEI 311
TY+ +++GLC K G LE+A + M + P T L + L G LD +++
Sbjct: 503 TYNSLINGLC-KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561
Query: 312 LADKMERSTSCTIQELANA--MRGK 334
+ DK + T T L N M G+
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGR 586
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 140/272 (51%), Gaps = 2/272 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ CKR + A Q + + TP V TY+ L GL G++ A +L EM +
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++ +NSL+ +CKAG +++A + +M + +PD ++Y+ I A C++ D+
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M + P + TYN ++ C + +VE +LLD M+E+ +P+ +YN+++ +
Sbjct: 557 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQY 616
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C + + M +V P+ +TYN+++K + A + M ++GF +
Sbjct: 617 CIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTA 676
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++YS ++ L KKK K EA + F M EG+
Sbjct: 677 TSYSALIRLLNKKK-KFVEARELFHDMRKEGL 707
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ L LCK+ V+ A++ ++ TY+ L+ GL G
Sbjct: 457 MVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 516
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A + +M D+ + +L++A+CK+G++D AH +L+EM G +P +Y++
Sbjct: 517 LEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + ++LD M N+ PN TYN ++++ C ++ ++ M R
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ HC + AL M ++ +Y+ +++LL + +F A
Sbjct: 637 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 696
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
E++ M K G Y +
Sbjct: 697 ELFHDMRKEGLTAESDVYDFYI 718
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+KP +Y L+ ALCK + AH + PT+ TY++L+ G G + +
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
KL D MLE+ + +NSL++ C N+ + + MRS P+ +Y+I I
Sbjct: 592 KLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGH 651
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--ANP 182
C+A ++ D M + +Y+ +IR L K +K EA +L +M + G A
Sbjct: 652 CKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAES 711
Query: 183 DEWSYNAILAYHCDRAEVNMAL 204
D + + L ++ D E +AL
Sbjct: 712 DVYDFYIDLNFNEDNLESTLAL 733
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+E I P+ + L+ C ++K + + + + P TY+IL++G
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARN 656
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA DEM+++ + ++++L+ + K EA + +MR G ++ Y
Sbjct: 657 MKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDF 716
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV 146
+I +++ S + D + ++V
Sbjct: 717 YIDLNFNEDNLESTLALCDELVEASIV 743
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 22/302 (7%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK K V A++ + +PTV T + L+ G VG+ EA L EM+ +
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS---------------- 118
D+ N L++A+CK G I EA + M G PD +YS
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAK 336
Query: 119 ----IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
I I+ FC+ + + M+ + P+ TYN +I LCK+ ++ A++L+DE
Sbjct: 337 HVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDE 396
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M + G D +YN+++ C V+ A+ L+ ++ + + D +TYN+++ L + GR
Sbjct: 397 MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGR 456
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A +++ + +G+ +V TY++M++GLC +G L EA M D G P + T E
Sbjct: 457 LKDAQVIFQDLLIKGYNLTVWTYTIMINGLC-LEGLLNEAETLLSKMEDNGCVPDAVTCE 515
Query: 295 ML 296
+
Sbjct: 516 TI 517
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 144/321 (44%), Gaps = 27/321 (8%)
Query: 2 VEF-GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+EF GIKP+I L L++ C ++ A F K + P T + LV+G +
Sbjct: 97 LEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHK 156
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA D +L + +++ +L+ +CK G A MLR++ D YS
Sbjct: 157 VKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYST 216
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ ++ + + M + P V T N +I C + +EA+ LL EM+ +
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD--------------------R 219
NPD +++N ++ C ++ A I M KE VMPD +
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAK 336
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
H Y++V+ ++ D+A ++ M R P TY+ ++ GLC K G++ A + +
Sbjct: 337 HVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLC-KSGRISYAWELVD 395
Query: 280 MMVDEGIPP----YSSTVEML 296
M D G P Y+S ++ L
Sbjct: 396 EMRDSGQPADIITYNSLIDAL 416
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV I P +Y + L+ ALCK +K A K P V TYS L+ G V E
Sbjct: 272 MVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNE 331
Query: 60 LSEAR--------------------KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+++A+ LF EM R+ D + +NSL++ +CK+G I A
Sbjct: 332 VNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAW 391
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
++ EMR G D +Y+ I A C+ + + ++ +K + +++TYN +I L
Sbjct: 392 ELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGL 451
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK ++++A + +++ +G N W+Y ++ C +N A L+++M +PD
Sbjct: 452 CKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDA 511
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
T +++ L + +RA ++ M RG
Sbjct: 512 VTCETIIRALFENDKNERAEKLLREMIARGL 542
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 127/259 (49%), Gaps = 1/259 (0%)
Query: 8 PSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ + ++L +L K KH V F+ + P + + SIL+ +G++ A +
Sbjct: 69 PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F ++L+ + + +L++ C + EA + ++G + SY I+ C+
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + ++L ++ + +V Y+ II LCK++ V +AY+L EMI + +P +
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
N+++ +C + A L+ M +N+ PD +T+N+++ L + G+ A M
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308
Query: 247 KRGFYPSVSTYSVMVHGLC 265
K G P V TYS ++ G C
Sbjct: 309 KEGVMPDVVTYSSLMDGYC 327
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 5/257 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+V + ++ L + LF ++ +I++ + L+ C G + A +
Sbjct: 69 PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++ +G P+ + + + FC + + D + N +Y +I LCK
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ A Q+L ++ + + D Y+ I+ C VN A L + M + + P T
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N ++ VG+F A + M + P V T++++V LC K+GK++EA +M
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALC-KEGKIKEAKSGIAVM 307
Query: 282 VDEGIPP----YSSTVE 294
+ EG+ P YSS ++
Sbjct: 308 MKEGVMPDVVTYSSLMD 324
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F ML ++ +L ++ K + + ++ G +P+ S SI I+ +C
Sbjct: 59 FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ F + + + PN T +++ C N KV+EA D ++ G + ++ S
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C E AL+++ ++ + V D Y+ ++ L + + A E++ M
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ P+V T + +++G C G+ +EA MV + I P T +L + L
Sbjct: 239 TKRISPTVVTLNSLIYGYC-IVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 2/280 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P++Y ++ CK +V+ A+ + E P V + LV G E
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR LF M++ ++ +N L+ CK+GN+ EA G+L EM S+ PD F+Y+I
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + + R+ MK + P+ TYN +I CK +E+A L EM G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++ ++ +C+ ++ A+ L MT + ++PD TY ++ + A
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++ M + G +P+ T++ +V G K+G+L A +++
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGF-WKEGRLSVAIDFYQ 538
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+ P ++ L K+ + D P V Y+I + L +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+F+ M + ++ ++++++ CK GN+ +A+G+ +E+ P+ +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+A ++ + + M ++ + PN++ YNC+I CK+ + EA LL EM
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y ++ C +V A RL +M E + P TYN ++ + ++A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P++ T+S ++ G C + YFEM + +GI P
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI-KGIVP 477
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 7/303 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+FG+ P++Y + L+H CK ++ A + +P V TY+IL+ GL +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA +LF +M + +NSL+ CK N+++A + EM + G EP+ ++S
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C DI + + M +VP+V TY +I K ++EA +L +M+E G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++ ++ ++ +++A+ ++ + + +++ L + G RA+
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M G P + +Y M+ G ++K ++ + M+ GI P +L N+
Sbjct: 570 RFFSDMRSCGITPDICSYVSMLKGHLQEK-RITDTMMLQCDMIKTGILP-----NLLVNQ 623
Query: 300 LVG 302
L+
Sbjct: 624 LLA 626
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 8/276 (2%)
Query: 28 VAHQFFDNAKHEFTP--TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
++H+ F+ + +P ++ +S+L+ ++G EA + EM KC D A S+
Sbjct: 114 MSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSI 170
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF-RVLDSMKRYN 144
L + + D + M S G PD Y + C ++S ++LD M
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC-CFKQGLYSKKEKLLDEMTSLG 229
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ PNV+ Y I LC++ K+EEA ++ + M + G P+ ++Y+A++ +C V A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L + ++P+ + ++ + A ++ M K G P++ Y+ ++HG
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
C K G + EA M + P T +L N L
Sbjct: 350 C-KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 1/165 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + L+ A K ++K A + + D + P T++ LV G G LS A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ E +++ + + L+E +C+ G I A +MRS G PD SY +
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
+ I + M + ++PN+ + R N V+ A
Sbjct: 594 HLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G+KP++ L+ K+ + A +D + E P+ T +I++ GL G
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SE++ ++++ + +N +++ K G+++ A + EM IG P+ F+Y+
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC++N++ +V+D MK + +V Y +I C+ + A QLL E+ E G
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++ Y+++++ + AL L RM E + D Y ++ L++ G+ A+
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E++ M +G P + TYSV++HGLC KG+LE A K E M + + P
Sbjct: 734 ELYAEMLAKGIMPDLITYSVLIHGLC-NKGQLENAQKILEDMDRKCMTP 781
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 150/296 (50%), Gaps = 5/296 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
I P++++++ L+ K + + A + FD A V TY+ L+ L G++SEA
Sbjct: 395 ISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACS 454
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++++M+ + ++++N+++ C+ G++D A+G+ EM G +P+ +YS+ + +
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D F + D M+ N+ P+ FT N II LCK + E+ L ++++ G P
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN I+ VN AL + T M K V P+ TY ++ + D A +V + M
Sbjct: 575 TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEM 634
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLR 297
+ +G V+ Y ++ G C +KG + A + + + G+ P YSS + R
Sbjct: 635 KNKGIELDVTVYCALIDGFC-RKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 142/311 (45%), Gaps = 36/311 (11%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+ LL++ K K + A F++ + + P + +I + L + EAR ++++M
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+ D + ++ A + G ++EA G RE ++ G E DA +YSI I A C+ D
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ +L M+ VP+ + +I K K+ EA ++ EM+ G + ++
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C + +++ AL L +M + + P+ TY ++++ + G D+A E++ M+ +
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396
Query: 252 PS----------------------------------VSTYSVMVHGLCKKKGKLEEACKY 277
P+ V TY+ ++ LC K+GK+ EAC
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLC-KEGKMSEACSI 455
Query: 278 FEMMVDEGIPP 288
+E MV +G+ P
Sbjct: 456 WEKMVRKGVRP 466
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI + L+ L K + A + + + P + TYS+L+ GL + G+
Sbjct: 704 MINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQ 763
Query: 60 LSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A+K+ ++M +RKC + +N+L+ K GN+ EA + EM G PD +Y
Sbjct: 764 LENAQKILEDM-DRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822
Query: 119 IFIHAFCEANDIHS 132
I ++ + ++ S
Sbjct: 823 ILVNGKVKDGNLFS 836
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
++ R + E D+ ++ ++++ + I+ +S+ ++VP + N + +L
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200
Query: 161 KNEKVEEAYQLLDEMIERGANPD---------------------EW-------------- 185
KN + EA + ++M +G D W
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y+ ++ C + + AL L+ M + +P + V+ + ++ G+ A +V M
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
G +V + ++ G C K+G L+ A + F+ M + GI P + T ++ G
Sbjct: 321 LSCGKPMNVVVATTLMKGYC-KQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379
Query: 306 LD-IIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEE 344
+D EI + S T+ + + +R G+ K+RS E
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIR---GYLKARSPE 416
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V R+++S +R + + +N ++ K +++ +A + +IE+ P N L+
Sbjct: 138 VARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLS 197
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ A + +M + V D T +++++ +R G+ + A + + +G
Sbjct: 198 ELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVEL 257
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
YS+++ +CKK + A M D+G P+ E++ R++G+
Sbjct: 258 DARAYSIVIEAVCKKPDSV-AALGLLREMRDKGWVPH----EVIFTRVIGV 303
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP+ + + LCK KH + A +F V T + L+ GL + EA
Sbjct: 418 LKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEAT 477
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ M+ +D + +N +++ CKA +DEA + +M G +PD F+++IF+H +
Sbjct: 478 KVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTY 537
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + +LD MK L P++ TY II CK + + +A + L E+++ G P+
Sbjct: 538 CNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNA 597
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
YNA++ + ++ A+ ++ M + P TYN ++ + G + V+
Sbjct: 598 VIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQ 657
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ V Y++++ G C K GK++EA YF+ M GIPP T L
Sbjct: 658 CIVKDIELGVIGYTIIIQGFC-KIGKIDEAVMYFKEMHSRGIPPNKMTYTTL 708
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 135/263 (51%), Gaps = 1/263 (0%)
Query: 27 KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSL 85
+ A F + + +P++KT SILV LG G+L ARK+F EM + K D+ + ++
Sbjct: 158 RAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAM 217
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
++A+C+AG ID A ML E+R G +P +Y++ + A C++ + FR+ M +
Sbjct: 218 IKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRV 277
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P++ T+ +I L + ++ E +L EM G P+E YN ++ +HC + + AL+
Sbjct: 278 RPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALK 337
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L M + + TYN++ K L + G + A ++ + M G S ++ +V
Sbjct: 338 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHL 397
Query: 266 KKKGKLEEACKYFEMMVDEGIPP 288
+ G+L+ + M+ + P
Sbjct: 398 RGTGRLDLVLRLIREMLARFLKP 420
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 38/333 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M FGI P+ ++++ C++ H A + FD TV TY+++ + L GE
Sbjct: 307 MQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGE 366
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------------------------- 85
+ A K+ DEML V NS+
Sbjct: 367 MEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMT 426
Query: 86 --LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
++ +CK+G +EA + ++ G + + + IH C+ N++ +VL +M
Sbjct: 427 ACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS 486
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ + TYN +I+ CK K++EA QL D+MI+RG PD +++N L +C+ +V
Sbjct: 487 GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEI 546
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L L+ +M E + PD TY ++ + +A E + K G P+ Y+ ++ G
Sbjct: 547 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGG 606
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G + +A + M GI P T L
Sbjct: 607 Y-GRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 40/322 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGL------GDV 57
GI+P++ + L+ ALCK V+ A + + P++ T+ IL+ GL G+V
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300
Query: 58 GEL-----------------------------SEARKLFDEMLERKCPVDILAHNSLLEA 88
G + SEA KLFDEM+ + ++ +N + +A
Sbjct: 301 GAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKA 360
Query: 89 MCKAGNIDEAHGMLREMRSIG--AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
+CK G ++ A +L EM G F+ + H + V R++ M L
Sbjct: 361 LCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH-LRGTGRLDLVLRLIREMLARFLK 419
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
PN I++LCK+ K EEA ++ +++ +G + + NA++ C + A ++
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKV 479
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ M V DR TYN++++ + + D A ++ + M KRGF P + T+++ +H C
Sbjct: 480 LKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYC- 538
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
GK+EE + M EG+ P
Sbjct: 539 NLGKVEEILHLLDQMKSEGLKP 560
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 40/300 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDVGELS 61
G+ ++ + L+H LC+ ++K A + N+ E TY+I+++G ++
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRI--TYNIMIQGCCKASKMD 509
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA +L D+M++R D+ N L C G ++E +L +M+S G +PD +Y I
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+C+A D+H L + + L PN YN +I +N + +A +LD M G
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629
Query: 182 PDEWSYNAILAYHCDRA-----------------------------------EVNMALRL 206
P +YN+++ + C +++ A+
Sbjct: 630 PTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M + P++ TY ++ + G + A+++++ M G P +Y+ ++ G C+
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 5/273 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ G KP ++ + LH C V+ D K E P + TY ++ G +
Sbjct: 518 MIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + E+++ + + +N+L+ + GNI +A G+L M+ G +P +Y+
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C A + V V ++ V Y II+ CK K++EA EM RG
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG 697
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ +Y ++ + A +L M ++PD +YN ++ V D+
Sbjct: 698 IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMV 757
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL----CKKK 268
E M + +Y+ V G+ C+K+
Sbjct: 758 ESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKE 790
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 20/298 (6%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA-- 92
+A+ +P V T +L + D L AR+L +L R P+ + A ++ ++ C A
Sbjct: 84 HAEDLLSPRVSTL-LLQSLVADRASLPSARRLVSRLL-RFNPLSV-AAAAIADSHCTATA 140
Query: 93 -------------GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
G++ A E+ + GA P + SI + A + +V
Sbjct: 141 DLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGE 200
Query: 140 MKRYNLV-PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M+ V P+V TY +I+ LC+ +++ A+ +L E+ G P +YN ++ C
Sbjct: 201 MRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSG 260
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V A RL RM + V P T+ +++ L R +F V + M+ G P+ Y+
Sbjct: 261 RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYN 320
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
M+ C+K G EA K F+ MV +GI T ++ L G ++ E + D+M
Sbjct: 321 EMIGWHCRK-GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM 377
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 13/328 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MVE G KP ++ QLL+ LCK RK +KV + P +Y+ LV L
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSG---IIPDAASYTFLVSSLCR 144
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G + A +L D+M E P + +NSL+ +C GN+ ++ +L + G P+A++
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS + A + ++LD + PN+ +YN ++ LCK + E+A QL E+
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P+ SYN +L C+ A L+ M + P TYN+++ L GR +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A EV E M + F P+ S+Y+ ++ LCK + K++ K + M+ P Y++
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDR-KVDLVVKCLDQMMYRHCNPNEGTYNAI 383
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERST 320
+ +V F II+ L +K ST
Sbjct: 384 ATLCEEGMVQEAF-SIIQSLGNKQHFST 410
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 4/293 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP++ + LL LCK + A Q F + F+P V +Y+IL+R L + G EA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM + + +N L+ ++ G + A +L EM +P A SY+ I
Sbjct: 292 NVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIAR 351
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + V + LD M + PN TYN I LC+ V+EA+ ++ + +
Sbjct: 352 LCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFST 410
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y ++ C + A +L+ MTK PD TY+ +++ L G + A E++
Sbjct: 411 QEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS 470
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
ME+ Y+ ++ G CK + + + A FE+MV +G +T +L
Sbjct: 471 VMEEN-IKLDTENYNSLILGCCKSR-RTDLALDVFEIMVGKGYLANETTYTIL 521
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 124/239 (51%), Gaps = 4/239 (1%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
L+ K +++A L M G +PD F + ++ C+ + +V++ M +
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P+ +Y ++ LC+ V A QL+D+M E G + +YN+++ C + +L+
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ R+ ++ ++P+ +TY+ +L+ + D A+++ + + +G P++ +Y+V++ GLC
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM---ERSTS 321
K+G+ E+A + F + +G P + +L L G + +L +M ERS S
Sbjct: 249 -KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+ F PT +Y+ ++ L ++ K D+M+ R C + +N++ +C+ G +
Sbjct: 335 RARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQ 393
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EA +++ + + Y I I + C + + F++L M +Y P+ FTY+ +I
Sbjct: 394 EAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
R LC + EA ++ M E D +YN+++ C ++AL + M + +
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+ TY ++++ ++ D ATEV ++ R
Sbjct: 513 ANETTYTILVEGIIHEKEMDLATEVLRELQLR 544
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+ KP+ + ++ LCK + V + + D + P TY+ + L + G
Sbjct: 333 MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGM 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + + ++ + ++ ++C+ GN A +L EM G PD+F+YS
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ + M+ N+ + YN +I CK+ + + A + + M+ +G
Sbjct: 452 LIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
+E +Y ++ E+++A ++ + +V+ ++++
Sbjct: 511 YLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLIMQ 558
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 2/313 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ Y LL+ LCK V A Q + H PT Y+ L+ G V +L A
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGA 389
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F++M R D + +N+L+ +CK I EA ++ EM G +P +++ I A
Sbjct: 390 FSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + F VL M+ + NV ++ +++ CKN K+ EA +LD+MI + P+
Sbjct: 450 YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPN 509
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
YN+I+ + + A L+ +M V TYN++LK L + + D A E+
Sbjct: 510 AQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIY 569
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
++ +G P V +Y+ ++ C KG + A + + M I P T L + L
Sbjct: 570 NLTNQGLRPDVVSYNTIISACC-NKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSA 628
Query: 304 GFLDIIEILADKM 316
G + +E L M
Sbjct: 629 GRVHDMECLYQHM 641
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 133/255 (52%), Gaps = 1/255 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I+P + L++ LCK + + A + K P+V+T++ L+ G G+L +
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ +M ++ ++++ S+++A CK G I EA +L +M P+A Y+ I A+
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAY 520
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
E+ F +++ MK + ++FTYN +++ LCKN +++EA +L+ + +G PD
Sbjct: 521 IESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDV 580
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SYN I++ C++ + + AL L+ M K ++ P TY+ +L L GR +++
Sbjct: 581 VSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQH 640
Query: 245 MEKRGFYPSVSTYSV 259
M + PS S Y
Sbjct: 641 MVHKNVEPSSSIYGT 655
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 146/292 (50%), Gaps = 2/292 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+V G+ P+ + L++ C+ + ++ A F+ K P TY+ L+ GL +
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA L EM + + N+L++A +AG +++ +L +M+ G + + S+
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ I +LD M ++VPN YN II ++ E+A+ L+++M G
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ ++YN +L C ++++ A LI +T + + PD +YN ++ G DRA
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRAL 600
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
E+ + M K P++ TY ++ L G++ + ++ MV + + P SS
Sbjct: 601 ELLQEMHKYDIRPTLRTYHPLLSAL-GSAGRVHDMECLYQHMVHKNVEPSSS 651
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 133/280 (47%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + ++ L + A + FD P TY+ ++ G G+L +L
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D+ML+ +++ +N LL +C+AG +DE ++ EM S PD F+YSI
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D ++ + + ++ +T + ++ LCK+ KV +A Q+L+ ++ G P
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN ++ +C ++ A + +M ++ PD TYN ++ L ++ A ++ ME
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
K G PSV T++ ++ + G+LE+ M D+GI
Sbjct: 433 KSGVDPSVETFNTLIDAY-GRAGQLEKCFTVLSDMQDKGI 471
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
MV+ G+ P+ + ++ K ++ + D + P V TY++L+ GL G
Sbjct: 221 MVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGR 280
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E R L DEM D ++ L + + + G+ + E G A++ SI
Sbjct: 281 MDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSI 340
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ + +VL+ + LVP YN +I C+ ++ A+ + ++M R
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YNA++ C + A L+ M K V P T+N ++ R G+ ++
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V M+ +G +V ++ +V C K GK+ EA + M+ + + P + + +
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFC-KNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDA 519
Query: 300 LVGLGFLDIIEILADKMERS 319
+ G + +L +KM+ S
Sbjct: 520 YIESGGTEQAFLLVEKMKSS 539
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ + ++L+ L VG ++ R F ++ D A N ++A AG++DEA M
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 102 LREM-RSIGAEP-DAFSYSIFIHAF----------------------------------- 124
LR M RS GA P DAFSY++ I
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D+ + FR+ D M + PNV TYN ++ LC+ +++E L+DEM PD
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y+ + + L L K+ V+ +T +++L L + G+ +A +V E
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ G P+ + Y+ +++G C+ + L+ A FE M I P T L N L +
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVR-DLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419
Query: 305 FLDIIEILADKMERS 319
+ E L +ME+S
Sbjct: 420 MITEAEDLVMEMEKS 434
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P +Y++++ GL G+ S+A K+FDEM++R + + +N++++ K G+++ +
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+M G +P+ +Y++ + C A + ++D M Y+++P+ FTY+ + L +
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
L E +++G ++ + +L C +V A +++ + ++P
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ +V A ++E M+ R P TY+ +++GLCK + + EA M
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME-MITEAEDLVMEM 431
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQELANAMR 332
G+ P T L + G L+ +L+D ++ + + ++
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVK 483
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 4/293 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P+ L+ ALC + A + + V TY L+RGL D E+ +A +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L EM E +++ ++SLL+ CK+G ++ + EM G EPD Y+ I + C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ V+D M R L PNV TYN +I +CK V+EA +L +M E+G PD
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 186 SYNAILAYHCDRAEVNMALRLITRMT--KENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ D E++ A+ L+ M K V P+ T+N V++ L +GR +A +V
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
ME+ G ++ TY++++ GL + K+ +A + + M G+ P S T +L
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVH-KVRKAMELMDEMTSLGLEPDSFTYSIL 403
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 159/335 (47%), Gaps = 38/335 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E GI+P++ LL CK + V F + ++ P V Y+ L+ L VG+
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A + D M+ R +++ +N L+ MCK G++ EA G+L++M G PD +Y+
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLV-PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I + ++ +L+ M R N+V PNV T+N +I+ LC ++ +A+Q+ M E
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN ++ +V A+ L+ MT + PD TY++++K ++ + DR
Sbjct: 356 TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDR 415
Query: 238 ATEVWESMEKRGFYP----------------------------------SVSTYSVMVHG 263
A ++ +M RG P V YS M+HG
Sbjct: 416 AEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHG 475
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
C K G L+ A + + +VDEG+ P + T ++ N
Sbjct: 476 AC-KAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 40/340 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P++ + L++ +CK VK A ++ P V TY+ L++GL DV E
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAH------------------ 99
+ EA L +EM+ K V +++ NS+++ +C G + +A
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365
Query: 100 -----GMLR------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
G+LR EM S+G EPD+F+YSI I FC+ + +L +M+
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ P +F Y ++ +C+ +E A L +EM + D +Y+ ++ C ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L+ + E + PD TY++V+ + + G + A V + M GF P V+ + ++
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
G KG++ + + M+ + I S + L LV
Sbjct: 545 GY-STKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 7/270 (2%)
Query: 19 ALCKRKHVKVAHQFFDNAKHEFTPTVK---TYSILVRGLGDVGELSEARKLFDEM-LER- 73
A C +H+++ + + P+V+ +Y+ ++ L G A L M LE
Sbjct: 49 AACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPH 108
Query: 74 -KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
C + +++ L+ A+C D+A G+LR MRS G D +Y I C+A ++
Sbjct: 109 PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDK 168
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
++ M + PNV Y+ +++ CK+ + E+ ++ EM E+G PD Y ++
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + A ++ M + + P+ TYN+++ + + G A V + M ++G P
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
V TY+ ++ GL +++EA E MV
Sbjct: 289 DVVTYNTLIKGLSDVL-EMDEAMWLLEEMV 317
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 6/299 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-----NAKHEFTPTVKTYSILVRGLGDV 57
EF K S+ + +L+ + +F+D N +P +++++++ L +
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ A ++F M ERKC D + +L++ +CK IDEA +L EM+S G P Y
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
++ I C+ D+ V +++D+M VPN TYN +I LC K+++A LL+ M+
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
P++ +Y ++ + A+RL++ M + ++H Y++++ L + G+ +
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A +W M ++G P++ YSV+V GLC ++GK EA + M+ G P + T L
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLC-REGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 2/301 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P Y L+ LCK + + A D + E +P+ Y++L+ GL G+L+ KL
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
D M + C + + +N+L+ +C G +D+A +L M S P+ +Y I+ +
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
R+L SM+ N Y+ +I L K K EEA L +M E+G P+
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + N A ++ RM +P+ +TY+ ++K + G + A +VW+ M+
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
K G + YSV++ GLC G+++EA + M+ GI P + + L G+G +
Sbjct: 460 KTGCSRNKFCYSVLIDGLC-GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 307 D 307
D
Sbjct: 519 D 519
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 156/343 (45%), Gaps = 17/343 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ + L+H LC + + A + + P TY L+ GL ++A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L M ER ++ ++ L+ + K G +EA + R+M G +P+ YS+ +
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +L+ M +PN +TY+ +++ K EEA Q+ EM + G + +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ Y+ ++ C V A+ + ++M + PD Y+ ++K L +G D A +++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 244 SM---EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M E+ P V TY++++ GLC +K + A M+D G P T N L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQK-DISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Query: 301 V--------GLGFLDIIEILADKMER-STSCTIQELANAMRGK 334
G FL+ + + K +R S +CTI E+ M GK
Sbjct: 586 SEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV---MLGK 625
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 24/320 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV P+ L++ L K++ A + + + + YS+L+ GL G+
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L+ +M E+ C +I+ ++ L++ +C+ G +EA +L M + G P+A++YS
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F + +V M + N F Y+ +I LC +V+EA + +M+ G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMT---KENVMPDRHTYNMVLKLLVRVGRFD 236
PD +Y++I+ C ++ AL+L M + PD TYN++L L
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKK-----KGK--LEE-------------ACK 276
RA ++ SM RG P V T + ++ L +K KG+ LEE AC
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACT 617
Query: 277 YFEMMVDEGIPPYSSTVEML 296
E+M+ + + P +ST M+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMI 637
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 22/274 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G KP+I L+ LC+ A + + P TYS L++G G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +++ EM + C + ++ L++ +C G + EA + +M +IG +PD +YS
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 120 FIHAFCEANDIHSVFRVLDSM---KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I C + + ++ M + P+V TYN ++ LC + + A LL+ M+
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY--NMVLKLLVRVGR 234
+RG +PD + N L T K N ++ +V++LL R R
Sbjct: 568 DRGCDPDVITCNTFLN---------------TLSEKSNSCDKGRSFLEELVVRLLKR-QR 611
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
A + E M + P ST++++V +CK K
Sbjct: 612 VSGACTIVEVMLGKYLAPKTSTWAMIVREICKPK 645
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML--- 71
L+ LC VK A + P YS +++GL +G + A KL+ EML
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND-- 129
E K D++ +N LL+ +C +I A +L M G +PD + + F++ E ++
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592
Query: 130 -------------------IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
+ +++ M L P T+ I+R++CK +K+ A
Sbjct: 593 DKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 3/282 (1%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
K HV VA Q + + +++ Y+ L+ G +G+L EA+ + M + D++
Sbjct: 173 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 232
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
N+LL G ++A + REM G P+A SY+ + + RV M+
Sbjct: 233 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P+ TY ++ CK ++ + Y+ LD M G D Y H + ++
Sbjct: 293 RKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLE 352
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L L+ RM + PD YN+V++L ++G +A +W ME P V T+++MV
Sbjct: 353 ECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMV 412
Query: 262 HGLCKKKGKLEEACKYFEMMVDEG--IPPYSSTVEMLRNRLV 301
GL +G L EAC YF+ MV G + P ++ L N LV
Sbjct: 413 TGLV-GQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLV 453
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 39/326 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ LL+ C+ + A K E P V ++ L+ G G +A +L
Sbjct: 194 SLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELA 253
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
EM R CP + +++ +L++ + G +DEA + EMR G PD+ +Y + AFC+A
Sbjct: 254 REMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKA 313
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
I + LD M R L + Y K E++EE +L++ M E PD Y
Sbjct: 314 GRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIY 373
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM----------------------- 224
N ++ C E A+ L M + P T+ +
Sbjct: 374 NVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVG 433
Query: 225 --------------VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+L LVR + + A +VW + +G + +++ +H L KK
Sbjct: 434 RGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALYAKK-H 492
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
++EAC Y M+D G+ P T L
Sbjct: 493 VKEACMYCLDMLDAGLMPQPDTFAKL 518
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 157/306 (51%), Gaps = 4/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
+ F PS+ + LLH+L + +++A F K TP + + +IL++GL +G
Sbjct: 148 LPSFNSHPSVRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGIG 207
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L A K+ DEM D++ + ++L A C G+I+ A + ++ + G PD Y+
Sbjct: 208 DLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYT 267
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I +C+ ++ R++D M+ + PN TY+ +I CK EK EA + EM+
Sbjct: 268 VLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREMLGA 327
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++ C + A +L M K+NV PD + ++ L + G A
Sbjct: 328 GYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVREA 387
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ +E RGF PS+ TY+ ++ GLC+ + +L+EA + ++ MV+ G P + T E L
Sbjct: 388 RNLFDELE-RGFKPSLLTYNSLISGLCENE-ELQEAGRVWDDMVERGYEPNAMTYEALIK 445
Query: 299 RLVGLG 304
L G
Sbjct: 446 GLCKTG 451
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 8/290 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI P + +L A C + ++ A + FD+ P V Y++L+ G G
Sbjct: 219 MPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQCGN 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A ++ DEM + + + ++ ++EA CK EA +REM G PD +
Sbjct: 279 LQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTALGAK 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ +++ M++ N+ P+ + +I LCKN V EA L DE+ ERG
Sbjct: 339 VVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVREARNLFDEL-ERG 397
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN++++ C+ E+ A R+ M + P+ TY ++K L + G+ +
Sbjct: 398 FKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEALIKGLCKTGKPNEGA 457
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGK------LEEACKYFEMMVD 283
V+E M RG PS + V+V L + + + LE A Y +D
Sbjct: 458 TVFEEMVSRGCKPSSLLFQVLVDSLSEPRHEDTIRKILETAALYGRYFLD 507
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P+ S +I + D+ + +VLD M + P+V TY ++ C +E A +L
Sbjct: 191 PNLVSCNILLKGLVGIGDLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKL 250
Query: 172 LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
D++I G PD Y ++ +C + A R++ M V P+ TY++V++ +
Sbjct: 251 FDDIIASGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCK 310
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSS 291
+ A + M G+ P + + +V LC+ GK EEA + + M + +PP +
Sbjct: 311 EEKPIEARDFMREMLGAGYVPDTALGAKVVDVLCQD-GKSEEAYQLWRWMEKKNVPPDNM 369
Query: 292 TVEMLRNRLVGLGFLDIIEILADKMERS 319
L L G + L D++ER
Sbjct: 370 VTSTLIYWLCKNGMVREARNLFDELERG 397
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 151/328 (46%), Gaps = 37/328 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+KP+I + ++H C V+ A K + P TY L+ G+ G L EA
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNID--------------------------- 96
K+F+EM+++ + +N+L++ C GN+D
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Query: 97 --------EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
EA M++E++ G PDA +Y+I I+ +C + F + D M + P
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TY ++ L K +++EA L ++ G PD +NA++ HC + V A L+
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK 490
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + V PD T+N +++ R G+ + A E+++ M++RG P +++ ++ G ++
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY-SRR 549
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEML 296
G +++A + M+D G P T L
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 151/304 (49%), Gaps = 9/304 (2%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSE 62
G K SI D L+ + C A + F K + PT++T + L+ +
Sbjct: 146 LGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEA 204
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L+ EM + + N ++ +CK G + +A + M + G +P+ +Y+ +H
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C + + + +L +MKR + P+ FTY +I +CK ++EEA ++ +EM+++G P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
YN ++ C++ ++MA M K+ + P TYN ++ L R D A +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML-- 296
+ ++++G P TY+++++G C + ++A + M+ GI P Y+S + +L
Sbjct: 385 KEIQEKGISPDAITYNILINGYC-RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Query: 297 RNRL 300
+NR+
Sbjct: 444 KNRM 447
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 35/323 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M IK S+Y + +++ LCK +K A F + + P + TY+ +V G G
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + M +K D + SL+ MCK G ++EA + EM G P A Y+
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC ++ D M + + P + TYN +I L ++ +EA ++ E+ E+G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN ++ +C A A L M + P + TY +L +L + R A
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
++++ + G P V ++ ++ G C
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 267 -KKGKLEEACKYFEMMVDEGIPP 288
++GK+EEA + F+ M GI P
Sbjct: 512 CREGKVEEARELFDEMKRRGIKP 534
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 1/267 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI P++ + L+HAL + A + + +P TY+IL+ G
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L DEML + SLL + K + EA + +++ S G PD ++
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNA 471
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +++ F +L M R + P+ T+N I++ C+ KVEEA +L DEM RG
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD S+N +++ + R ++ A R+ M P TYN +++ L + D A
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK 266
E+ + M +G P +TY ++ G+ K
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
E GI P + L++ C+ + K A D PT KTY+ L+ L +
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA LF ++ D++ N+L++ C N+ A +L++M + PD +++ +
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + + D MKR + P+ ++N +I + +++A+++ +EM++ G N
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFN 568
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
P +YNA++ C E ++A L+ M + + PD TY +++ + +V
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 43/258 (16%)
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N I +F L + + + ++ +I+ C + +EA++ M E+G P +
Sbjct: 129 TNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIET 188
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
N++L+ A L M + + +T+N+++ +L + G+ +A + ME
Sbjct: 189 CNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHME 248
Query: 247 KRGFYPSVSTYSVMVHGLCK----------------------------------KKGKLE 272
G P++ TY+ +VHG C K+G+LE
Sbjct: 249 TSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLE 308
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER----STSCTIQELA 328
EA K FE MV +G+ P + L + G LD+ D+M + T T L
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
Query: 329 NAMRGKTGFRKSRSEETE 346
+A+ F + R++E E
Sbjct: 369 HAL-----FMEQRTDEAE 381
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + ++ C+ V+ A + FD K P +++ L+ G G++ +A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ +EML+ +L +N+L++ +CK D A +L+EM S G PD +Y I
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Query: 125 CEAN 128
+ N
Sbjct: 617 AKVN 620
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVK----VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
GIKP + L+ +R +K V ++ D F PTV TY+ LV+GL E
Sbjct: 531 GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG---FNPTVLTYNALVQGLCKNQEG 587
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
A +L EM+ + D + +L+E + K DE
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H CK +++A FD+ K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E +L M D+ H+ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 DEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L+P++ TYN +I LCK +++ L+DEM +G
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M G P + TY+++++ C KKG + K + M G P T
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 138/281 (49%), Gaps = 2/281 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
+ IY L+ A + ++ A + + K H+F T ++ L +
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ CK G I A + + G P S++ ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ M+ + P+V+T++ +I LCK K+++A +L DEM++ G P+
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G + ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 SMKGLKPDKITYTTLIDGNC-KEGDLETAFEYRKRMIKENI 342
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 32/328 (9%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + LL AL + V +DN K P V TY++L+R L + ARK+
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML------------------------ 102
DEM + C D ++H +++ MCK G ++EA G L
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 186
Query: 103 ------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EM G +P+ +Y+ + AFC+A ++ +L M PNV T+ ++
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ ++ KV +A + M++ G P SYN ++ C ++ AL M + ++
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ TY+ ++ G D A +W M+ G P+V Y+ M+ LCKK ++A
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM-MFDQAES 365
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ M+ + PP + T L RL G
Sbjct: 366 LIDKMLMDNCPPNTVTFNTLIGRLCDCG 393
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ G PS + L+ LC +K A FF++ K + P TYS LV G + G+
Sbjct: 265 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +++EM C +++ + ++++ +CK D+A ++ +M P+ +++
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 384
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + V M+R PN TYN ++ L + ++A+ ++ EM+ G
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 444
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+YN ++ C A+ L+ RM + + PD T+N ++ + G+ A
Sbjct: 445 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 504
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M +V Y++++ LC +GKL A Y M+ EGI P +T +L
Sbjct: 505 CLLGQMNAVNCPRNVVAYTILISELC-NQGKLSNAMVYLLKMLYEGICPNEATWNVL 560
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G++P++ ++ A CK + +++A TP V T++ LV+G + G+
Sbjct: 195 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 254
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++ M++ +++N L+ +C G++ A M+ P+A +YS
Sbjct: 255 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 314
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F A D+ + + MK PNV Y +I LCK ++A L+D+M+
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ CD V AL + M + P+ TYN +L L R G A
Sbjct: 375 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 434
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M GF S+ TY+ +++ LC+ + MMV +GI P + T + +
Sbjct: 435 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV-QGIQPDAFTFNAIIHA 493
Query: 300 LVGLGFLDIIEILADKME 317
G + I L +M
Sbjct: 494 YCKEGKVSIAACLLGQMN 511
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 7/281 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V+ Y+ L+ L + ++D M + ++ +N L+ A+C+ +D A M
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM G PD S+ + C+ + L VP +YN ++ LC
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALCG 181
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ E + +++EM++RG P+ +Y I+ C E+ MA ++ RM P+ T
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 241
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++K G+ A +W M G+ PS +Y+V++ GLC G L+ A +F M
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLC-CIGDLKGALDFFNSM 300
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
+ P ++T L + G LD ++ ++M +S+ C
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM-KSSGC 340
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 11/247 (4%)
Query: 53 GLGDVGELSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
GL G++ + EM R C D L + + A +AG+ D A +G
Sbjct: 7 GLPAAGDVDGVQYALQEMRLRGVACTEDALV--AAIGAFARAGSADRALKTFYRASDLGC 64
Query: 111 -EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+P Y+ + A N + +V V D+M++ + PNV+TYN +IR LC+N++V+ A
Sbjct: 65 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 124
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++LDEM +G +PDE S+ I++ C V A R +P + +YN V+ L
Sbjct: 125 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHAL 179
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
R V M +RG P+V TY+ +V CK + +L AC MV G P
Sbjct: 180 CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAR-ELRMACAILARMVSMGCTPN 238
Query: 290 SSTVEML 296
T L
Sbjct: 239 VLTFTAL 245
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ ++LLH L + + K A + + F ++ TY+ ++ L + A
Sbjct: 409 GCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHA 468
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L M+ + D N+++ A CK G + A +L +M ++ + +Y+I I
Sbjct: 469 MLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISE 528
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
C + + L M + PN T+N ++R + N L ++E
Sbjct: 529 LCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIVE 582
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 13/328 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MVE G KP ++ QLL+ LCK RK +KV + P +Y+ LV L
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSG---IIPDAASYTFLVSSLCR 144
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G + A +L D+M E P + +NSL+ +C GN+ ++ +L + G P+A++
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
YS + A + ++LD + PN+ +YN ++ LCK + E+A QL E+
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+G +P+ SYN +L C+ A L+ M + P TYN+++ L GR +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSST 292
A EV E M + F P+ S+Y+ ++ LCK + K++ K + M+ P Y++
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDR-KVDLVVKCLDQMMYRHCNPNEGTYNAI 383
Query: 293 VEMLRNRLVGLGFLDIIEILADKMERST 320
+ +V F II+ L +K ST
Sbjct: 384 ATLCEEGMVQEAF-SIIQSLGNKQHFST 410
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 4/293 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP++ + LL LCK + A Q F + F+P V +Y+IL+R L + G EA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEA 291
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM + + +N L+ ++ G + A +L EM +P A SY+ I
Sbjct: 292 NVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIAR 351
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + V + LD M + PN TYN I LC+ V+EA+ ++ + +
Sbjct: 352 LCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFST 410
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ Y ++ C + A +L+ MTK PD TY+ +++ L G + A E++
Sbjct: 411 QEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS 470
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
ME+ Y+ ++ G CK + + + A FE+MV +G +T +L
Sbjct: 471 VMEEN-IKLDTENYNSLILGCCKSR-RTDLALDVFEIMVGKGYLANETTYTIL 521
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 124/239 (51%), Gaps = 4/239 (1%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
L+ K +++A L M G +PD F + ++ C+ + +V++ M +
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P+ +Y ++ LC+ V A QL+D+M E G + +YN+++ C + +L+
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ R+ ++ ++P+ +TY+ +L+ + D A+++ + + +G P++ +Y+V++ GLC
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM---ERSTS 321
K+G+ E+A + F + +G P + +L L G + +L +M ERS S
Sbjct: 249 -KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+ F PT +Y+ ++ L ++ K D+M+ R C + +N++ +C+ G +
Sbjct: 335 RARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQ 393
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EA +++ + + Y I I + C + + F++L M +Y P+ FTY+ +I
Sbjct: 394 EAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
R LC + EA ++ M E D +YN+++ C ++AL + M + +
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
+ TY ++++ ++ D ATEV ++ R
Sbjct: 513 ANETTYTILVEGIIHEKEMDLATEVLRELQLR 544
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M+ KP+ + ++ LCK + V + + D + P TY+ + L + G
Sbjct: 333 MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGM 391
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + + ++ + ++ ++C+ GN A +L EM G PD+F+YS
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ + M+ N+ + YN +I CK+ + + A + + M+ +G
Sbjct: 452 LIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
+E +Y ++ E+++A ++ + +V+ +V++
Sbjct: 511 YLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQ 558
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 141/275 (51%), Gaps = 5/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M G++ +I+ + L+HA CK V+ A + + P + TY+ L+ G
Sbjct: 191 MARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGM 250
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + D M DI+ +NSL+ CK G + EA + +E+R A P+ +Y+
Sbjct: 251 HYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD--ATPNHVTYTT 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ND+ R+ + M+ L P V TYN I+RKLC+ ++ +A +LL+EM E+
Sbjct: 309 LIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKK 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N ++ +C ++ AL++ RM + + D+ TY ++ ++ D A
Sbjct: 369 IEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAK 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ SM GF PS TYS +V G C ++ EEA
Sbjct: 429 ELLLSMLDAGFSPSYCTYSWLVDGYCNQQN--EEA 461
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 134/262 (51%), Gaps = 1/262 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GIKP I + L+H CK ++ A + F + + TP TY+ L+ G + +L +A
Sbjct: 265 GIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR-DATPNHVTYTTLIDGYCRLNDLDQAL 323
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +EM + ++ +NS+L +C+ G I +A+ +L EM EPD + + I+A+
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAY 383
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D+ S +V + M L + FTY +I CK +++ A +LL M++ G +P
Sbjct: 384 CKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSY 443
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ ++ +C++ L+L ++ + D+ Y +++ + + D A +++
Sbjct: 444 CTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSL 503
Query: 245 MEKRGFYPSVSTYSVMVHGLCK 266
M+++G Y+ + + K
Sbjct: 504 MQEKGTLGDSVIYTSLAYAYWK 525
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P + ++L+ L K++ +M +I +N L+ A CK+G++++A
Sbjct: 161 FRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKAD 220
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+L EM S PD F+Y+ I +C+ + V D M+R + P++ TYN +I
Sbjct: 221 NLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGF 280
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK ++ EA +L E+ R A P+ +Y ++ +C +++ ALRL M + + P
Sbjct: 281 CKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTV 338
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TYN +L+ L +GR A ++ M ++ P T + +++ C K G ++ A K
Sbjct: 339 VTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC-KIGDMKSALKVKN 397
Query: 280 MMVDEGI 286
MV+ G+
Sbjct: 398 RMVEAGL 404
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 23/308 (7%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS------------- 61
++H L K KH+K A + A +F T S LVR L D +++
Sbjct: 84 MIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVR-LHDDPDINSHVFSWLVIVYAN 142
Query: 62 -----EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
EA ++F+ M+ + A LL ++ K D + ++M IG E +
Sbjct: 143 TKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHV 202
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y++ IHA C++ D+ +L M+ + P++FTYN +I CK EA + D M
Sbjct: 203 YNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRME 262
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G PD +YN+++ C + A+RL + + P+ TY ++ R+ D
Sbjct: 263 REGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLD 320
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+A + E ME +G YP+V TY+ ++ LC + G++ +A K M ++ I P + T L
Sbjct: 321 QALRLREEMEAQGLYPTVVTYNSILRKLC-EIGRIRDANKLLNEMSEKKIEPDNVTCNTL 379
Query: 297 RNRLVGLG 304
N +G
Sbjct: 380 INAYCKIG 387
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+K + L+H CK + + A + F+P+ TYS LV G +
Sbjct: 399 MVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQN 458
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
KL DE + + VD + +L+ CK +D A + M+ G D+ Y+
Sbjct: 459 EEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTS 518
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+A+ + ++ +LD M + L+ + Y +
Sbjct: 519 LAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRAL 554
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 3/282 (1%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
K HV VA Q + + +++ Y+ L+ G +G+L EA+ + M + D++
Sbjct: 161 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 220
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
N+LL G ++A + REM G P+A SY+ + + RV M+
Sbjct: 221 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 280
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P+ TY ++ CK ++ + Y+ LD M G D Y H + ++
Sbjct: 281 RKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLE 340
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L L+ RM + PD YN+V++L ++G +A +W ME P V T+++MV
Sbjct: 341 ECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMV 400
Query: 262 HGLCKKKGKLEEACKYFEMMVDEG--IPPYSSTVEMLRNRLV 301
GL +G L EAC YF+ MV G + P ++ L N LV
Sbjct: 401 TGLV-GQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLV 441
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 39/326 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ LL+ C+ + A K E P V ++ L+ G G +A +L
Sbjct: 182 SLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELA 241
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
EM R CP + +++ +L++ + G +DEA + EMR G PD+ +Y + AFC+A
Sbjct: 242 REMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKA 301
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
I + LD M R L + Y K E++EE +L++ M E PD Y
Sbjct: 302 GRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIY 361
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM----------------------- 224
N ++ C E A+ L M + P T+ +
Sbjct: 362 NVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVG 421
Query: 225 --------------VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+L LVR + + A +VW + +G + +++ +H L KK
Sbjct: 422 RGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALYAKK-H 480
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
++EAC Y M+D G+ P T L
Sbjct: 481 VKEACMYCLDMLDAGLMPQPDTFAKL 506
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 156/294 (53%), Gaps = 3/294 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G ++ A C++ +V +V F+ + P V ++ L+ GL G
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYS 118
+ +A +L +EM+ R ++ H +L++ +CK G ++A + L+ +RS G +P+ +Y+
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ +C+ + ++ +L M+ LVPN TY +I CK AY+L+D M +
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +P+ ++YNAI+ C + ++ A RL+ +++ + D TY +++ + R +R+
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M K GF P + +Y+ ++ C++K +++E+ + FE V G+ P T
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISXFCRQK-QMKESERLFEEAVSLGLIPTKKT 542
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ S L+ +L V++A + F + + +P ++ ++V ++G + EA
Sbjct: 184 GLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K + M+ER VD +++A C+ G ++ G +M +G P+ +++ I+
Sbjct: 244 EKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALING 303
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER-GANP 182
C+ I F +L+ M R PNV+T+ +I LCK E+A++L +++ G P
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKP 363
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +Y A++ +C ++N A L++RM ++ ++P+ +TY ++ +VG F RA E+
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELM 423
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M K GF P++ TY+ ++ GLC KKG L+EA + + G+ T +L
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLC-KKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G KP+++ +++ CK + A + + P TY+ L+ G VG A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M + +I +N++++ +CK G++DEA+ +L ++ G + D +Y+I +
Sbjct: 420 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 479
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C D + + M + P++ +Y +I C+ ++++E+ +L +E + G P
Sbjct: 480 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPT 539
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +Y +++ +C ++A++L RM+ PD TY ++ L + + D A +++
Sbjct: 540 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 599
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKK 267
+M +G P T + + CKK
Sbjct: 600 AMMDKGLSPCEVTRLTLAYEYCKK 623
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P I+ L+ C++K +K + + F+ A PT KTY+ ++ G G
Sbjct: 496 MLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A KLF M C D + + +L+ +CK +D+A + M G P +
Sbjct: 556 TSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLT 615
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C+ +D + VLD +++ + V N ++RKLC K++ A +++++
Sbjct: 616 LAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAALFFHKLLDKE 672
Query: 180 AN 181
N
Sbjct: 673 PN 674
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 37/269 (13%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
+V + G+L EA + EM + N +L+ G ++ A M EM G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD S+ + + A C +V EA
Sbjct: 220 VSPDCVSFKLMVVACCNMG-----------------------------------RVLEAE 244
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ L+ M+ERG D + I+ C + VN + +M + + P+ + ++ L
Sbjct: 245 KWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGL 304
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV-DEGIPP 288
+ G +A E+ E M +RG+ P+V T++ ++ GLC KKG E+A + F +V +G P
Sbjct: 305 CKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC-KKGWTEKAFRLFLKLVRSDGYKP 363
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKME 317
T + N L+ E+L +M+
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++ +N K++EA ++ EM +G + N +L V +A + M +
Sbjct: 159 CMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQR 218
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V PD ++ +++ +GR A + +M +RGF +T ++++ C +KG +
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFC-QKGYVNR 277
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMERS 319
YF MV+ G+ P L N L G + E+L + + R
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M FG+ ++ LL LCK + VK A F + P +++ LV G L
Sbjct: 1506 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARML 1565
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +EM + ++ + SL+EA C + + +L EMR P+ +Y+I
Sbjct: 1566 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTIL 1625
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+HA +A D +K + P+ YN +I L + ++E+AY +++EM G
Sbjct: 1626 MHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGI 1685
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ ++N +++ CD ++ AL+L+ +M +++ PD TY +LKL +
Sbjct: 1686 APNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLF 1745
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M ++ P STY+++V LC + GK+ ++C + E MV +G P T +++ +L
Sbjct: 1746 LVCHMFRKDISPDFSTYTLLVSWLC-RNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 1804
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 1/263 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
I P + L+H CK + +K A + K H F+P+V TY+ LV +
Sbjct: 1545 IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 1604
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L DEM +R+CP +++ + L+ A+ KAG EA +++ G PDA Y+ I+
Sbjct: 1605 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYIL 1664
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
A + + V++ M+ + PNV T+N +I C + + E A +LL +M E+ NPD
Sbjct: 1665 GRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDI 1724
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +L C R V + L L+ M ++++ PD TY +++ L R G+ ++ E
Sbjct: 1725 KTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEE 1784
Query: 245 MEKRGFYPSVSTYSVMVHGLCKK 267
M +GF P T+ +++ L K+
Sbjct: 1785 MVSKGFAPKQETFDLVMEKLEKR 1807
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
++ T + ++R L +EA F +M D A N LL+ +CK ++ A G+
Sbjct: 1479 SLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVF 1538
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+E+R PD S++ +H +C+A + ++ MK++ P+V TY ++ C
Sbjct: 1539 QELRGT-IPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCME 1597
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + Y LLDEM +R P+ +Y ++ AL ++ ++ V PD Y
Sbjct: 1598 KDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFY 1657
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +L R GR + A V E M G P+V+T++ ++ C + E A K M
Sbjct: 1658 NSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC-DHSQAENALKLLVKME 1716
Query: 283 DEGIPP 288
++ P
Sbjct: 1717 EQSCNP 1722
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ +KP++ L+ K+ + A FD PT T++ ++ GL VG+
Sbjct: 490 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR LE + +NS+++ K GNID A + REM G P+ +Y+
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC++N I + D M+ L +V Y+ +I CK +E A L E++E G
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ YN++++ D + AL +M + + D TY ++ L++ GR A+
Sbjct: 670 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS 729
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ M +G P + T+ V+V+GLC KG+LE A K E M + + P
Sbjct: 730 DLYMEMLSKGIVPDIITFHVLVNGLC-NKGQLENARKILEEMDRKNMTP 777
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 5/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI PS+++++ LL K + A + FD A + TY+I++ L G++ EA
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEAC 449
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D M+ + +++++N ++ C+ GN+D A + +M + +P+ +YSI I
Sbjct: 450 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 509
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D + D M N+ P FT+N II LCK ++ EA L +E G P
Sbjct: 510 FKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSC 569
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+I+ ++ AL + M + V P+ TY ++ + R D A + +
Sbjct: 570 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 629
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
M ++G V+ YS ++ G CK++ +E A F +++ G+ P Y+S + R+
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRR-DMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 686
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ I P+ + + +++ LCK + A N E F P+ TY+ +V G G
Sbjct: 525 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 584
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ EM E +++ + SL+ CK+ ID A EMR G E D +YS
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 644
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ D+ S + + L PN YN +I +E A +MI
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y ++ + A L M + ++PD T+++++ L G+ + A
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 764
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ E M+++ PSV Y+ ++ G ++G L+EA + M+D G+ P T ++L N
Sbjct: 765 KILEEMDRKNMTPSVLIYNTLIAGYF-REGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 36/311 (11%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+ LL+A + ++ A F+ + P V +IL+ L + E R L+++M+
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
R D + ++ A K G ++EA RE + G + DA +YSI I A C+ + +
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+L+ MK VP+ T+ +I + EA +L +EMI G + +++
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C + ++ AL L ++T++ + P++ TY+++++ G ++A+E++ M+ G
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392
Query: 252 PSV----------------------------------STYSVMVHGLCKKKGKLEEACKY 277
PSV TY++M+ LC K GK++EAC
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLC-KGGKMDEACSL 451
Query: 278 FEMMVDEGIPP 288
+ MV++G+ P
Sbjct: 452 LDNMVNQGMVP 462
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 125/263 (47%), Gaps = 1/263 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
+E G PS + ++ K ++ A + + + +P V TY+ L+ G +
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K DEM E+ +D+ A+++L++ CK +++ A + E+ +G P+ Y+
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I F + N++ + M + ++ TY +I L K ++ A L EM+ +G
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +++ ++ C++ ++ A +++ M ++N+ P YN ++ R G A
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 800
Query: 241 VWESMEKRGFYPSVSTYSVMVHG 263
+ + M RG P TY ++++G
Sbjct: 801 LHDEMLDRGLVPDDVTYDILING 823
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
++E G+ P+ + ++ +++ A ++ ++ P + TY+ L+ GL G
Sbjct: 665 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 724
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L+ EML + DI+ + L+ +C G ++ A +L EM P Y+
Sbjct: 725 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 784
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
I + ++ F + D M LVP+ TY+ +I K ++
Sbjct: 785 LIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
E D ++ ++A+ AN I + ++M +++P V N ++ L + + E
Sbjct: 147 ELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRD 206
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L ++M+ RG D ++ + ++ V A + V D Y+++++ +
Sbjct: 207 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 266
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ + E+ E M++RG+ PS +T++ ++ C +G + EA + E M++ G P
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVA-CVAQGNMVEALRLKEEMINCGKP 322
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V +++ KR++ + +N ++ + ++E A + MI + P N +L
Sbjct: 134 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 193
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
R + L +M + D T +++++ ++ GR + A E + ++RG
Sbjct: 194 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 253
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
YS+++ +CKK + E M + G P +T
Sbjct: 254 DAGAYSIIIQAVCKKPNS-NLGLELLEEMKERGWVPSEAT 292
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 2/315 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ L+ L + ++VA + K P TY+ L+ L G S A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F M + +N +++ +C G+I++A + +M +G P +Y+ I+
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++++ R+LD MK P+ +TYN ++ K K+E A EM+E G NP+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY A++ H +V++AL L+ RM + P+ +YN V+ L + RF A ++ +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++G P+V TY+ ++ GLC + G+ + A K F M P T L L
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLC-RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 304 GFLDIIEILADKMER 318
G D EIL +MER
Sbjct: 632 GKADEAEILLKEMER 646
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+PS+ + L++ L K+ V+ A +++ +P V TY+ L+ G
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +FD M++ C + + +++L+ +C G +DEA ML EM G EP ++Y++
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C ++ MK+ PNV TY +I L + K+E A L +M++ G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ C + AL++ M + + TYN ++K L G ++A
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M K G P+V TY+ +++G KG + A + ++M + G P
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYL-TKGNVNNAARLLDLMKENGCEP 476
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 161/317 (50%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P+ + L++ LC A + F + H +TY+ +++GL G+
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LF++ML+ ++ +N+L+ GN++ A +L M+ G EPD ++Y+
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F + + S M L PN +Y +I K+ KV+ A LL M E G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ SYNA++ + A ++ +M ++ ++P+ TY ++ L R GR A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ MEKR P++ TYS +++GLC++ GK +EA + M +G+ P T L +
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQE-GKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Query: 300 LVGLGFLDIIEILADKM 316
V LG +D +L +M
Sbjct: 663 FVVLGRIDHAFLLLRRM 679
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 154/316 (48%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G S+Y + LL L K + V+ A + + P++ T++ L+ L G++ EA
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++ + D+ + SL+ C+ N+D A G+ M G +P++ +YS I+
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +L+ M + P V+TY I LC E EEA +L+ M +RG P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A+++ ++ +A+ L +M KE ++P+ TYN ++ L GRF A +++
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
ME G + TY+ ++ GLC G +E+A FE M+ G P T L N +
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLC-LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456
Query: 304 GFLDIIEILADKMERS 319
G ++ L D M+ +
Sbjct: 457 GNVNNAARLLDLMKEN 472
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 138/274 (50%), Gaps = 1/274 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ G P++ + L++ + +V A + D K P TY+ LV G G+
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 493
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A F EM+E + +++ +L++ K G +D A +L+ M +G P+ SY+
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + N ++ D M L+PNV TY +I LC+N + + A+++ +M +R
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y++++ C + + A L+ M ++ + PD T+ ++ V +GR D A
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ M G P+ TYSV++ GL K+ LEE
Sbjct: 674 LLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEE 707
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 37/352 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ ++ + P ++ L+ C+ +++ +A FD K P TYS L+ GL + G
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 283
Query: 60 LSEARKLFDEMLE-----------------------------------RKCPVDILAHNS 84
+ EA + +EM+E R C ++ + +
Sbjct: 284 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 343
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ + + G ++ A G+ +M G P+ +Y+ I+ C + ++ M+ +
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ N TYN II+ LC +E+A L ++M++ G P +YN ++ + + VN A
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + PD TYN ++ + G+ + A+ ++ M + G P+ +Y+ ++ G
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K GK++ A + M + G P + + N L E + DKM
Sbjct: 524 -SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P ++++ + E+ +E+ + + N+LL + K ++ A
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++M + G +P +++ I+ + + +L + +Y+L P+VFTY +I
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+N ++ A+ + D M++ G +P+ +Y+ ++ C+ V+ AL ++ M ++ + P
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+TY + + L + + A E+ M+KRG P+V TY+ ++ GL + GKLE A +
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL-SRLGKLEVAIGLYH 362
Query: 280 MMVDEGIPPYSSTVEMLRNRL-VGLGFLDIIEIL 312
M+ EG+ P + T L N L VG F ++I
Sbjct: 363 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK +++A FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK ID+A+ + EM G P++ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN D Y ++ L R G+ A
Sbjct: 313 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A + + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+G P TY+ ++ G C K G L+ A ++ + M+ E
Sbjct: 309 SMKGLKPDKITYTTLIDGCC-KDGDLDTAFEHRKRMIQE 346
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ LH+ C H HQ AK V
Sbjct: 10 PANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQR 69
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 70 SDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKDGDLD 334
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A F T+ +Y ++ L LSEA+ L ++ RK G+
Sbjct: 11 ANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRK----------------GKGSA 54
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+ E + D + +S I A+ E+ + + + T +
Sbjct: 55 SAVFAAIFETKGT-QRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 113
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ L K + + + +E++E G + +N ++ C ++ +A + +TK +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGL 173
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P +YN ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KIDDAN 232
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
+ F+ M+ +G+ P S T L + G +D+ +EI + +S S
Sbjct: 233 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 3/282 (1%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
K HV VA Q + + +++ Y+ L+ G +G+L EA+ + M + D++
Sbjct: 173 KTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVV 232
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
N+LL G ++A + REM G P+A SY+ + + RV M+
Sbjct: 233 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P+ TY ++ CK ++ + Y+ LD M G D Y H + ++
Sbjct: 293 RKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLE 352
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L L+ RM + PD YN+V++L ++G +A +W ME P V T+++MV
Sbjct: 353 ECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMV 412
Query: 262 HGLCKKKGKLEEACKYFEMMVDEG--IPPYSSTVEMLRNRLV 301
GL +G L EAC YF+ MV G + P ++ L N LV
Sbjct: 413 TGLV-GQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLV 453
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 134/326 (41%), Gaps = 39/326 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ LL+ C+ + A K E P V ++ L+ G G +A +L
Sbjct: 194 SLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELA 253
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
EM R CP + +++ +L++ + G +DEA + EMR G PD+ +Y + AFC+A
Sbjct: 254 REMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKA 313
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
I + LD M R L + Y K E++EE +L++ M E PD Y
Sbjct: 314 GRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIY 373
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM----------------------- 224
N ++ C E A+ L M + P T+ +
Sbjct: 374 NVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVG 433
Query: 225 --------------VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+L LVR + + A +VW + +G +V +++ +H L KK
Sbjct: 434 RGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNVGAWTIWIHALYAKK-H 492
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
++EAC Y M+D G+ P T L
Sbjct: 493 VKEACMYCLDMLDAGLMPQPDTFAKL 518
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 157/310 (50%), Gaps = 14/310 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----------RKHVKVAHQFFDNAKHEFTPTVKTYSIL 50
M G P+++ +++ CK R+ ++ + N + +PTV TYS
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGE---SPTVVTYSTY 296
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ GL VG + A ++ V++ +N+++ +CK G +DEA +L EM+S G
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD ++YSI IH FC+ D+ +++ MK N+ P++ +Y+ + LCK + +
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLD 416
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+ ++ G D+ +Y+ ++ C + +++ A +L+ M + N+ PD + ++
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
++G + A E + M + G PS++T +V++ C ++G++EEA M +GI P
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHC-REGRVEEALNLMNEMQTQGIFPNL 535
Query: 291 STVEMLRNRL 300
T + NRL
Sbjct: 536 FTYNAVINRL 545
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN---AKHEFTPTVKTYSILVRGLGDVGELSE 62
++PS+ L H LCK++ ++ F + A +++ T YSIL++G G+L
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQT--AYSILIKGFCMQGDLDS 448
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A KL +EM+ D SL+ CK G A M G P + ++ I
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C + +++ M+ + PN+FTYN +I +LCK K E A +L M++R P
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
Y+ ++ ++ AL L RM K V PD Y +++ +L R A ++
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M + G P +Y+ ++ G C + G + +A F M+ G P T L +
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFC-RIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCK 687
Query: 303 LGFLDIIEILADKMER 318
+ +DI ++L D+M+R
Sbjct: 688 MNRIDIADMLIDEMKR 703
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
++Y + ++H LCK+ + A + + K +P V TYSIL+ G G++ + L
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+EM +++++SL +CK D + + R++ + G + D +YSI I FC
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
D+ S ++++ M R NL P+ + ++ CK A + + M+E G P +
Sbjct: 444 GDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATC 503
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N I+ HC V AL L+ M + + P+ TYN V+ L + + +RA E++ M K
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLK 563
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
R PSV YS ++ G K+ ++A + M+ G+ P +L N L
Sbjct: 564 RNVLPSVVVYSTLIDGFAKQSNS-QKALMLYARMLKIGVTPDMVAYTILINIL 615
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P+++ + +++ LCK + + A + F K P+V YS L+ G +A
Sbjct: 530 GIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKA 589
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+ ML+ D++A+ L+ +C + EA+ + ++M G PD SY+ I
Sbjct: 590 LMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAG 649
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC D+ + + + M + +P V TY ++ CK +++ A L+DEM +G PD
Sbjct: 650 FCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPD 709
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+YN ++A H R ++ AL ++ M + V+PD TY M+ LL
Sbjct: 710 VVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWLL 755
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E GI PSI + ++ A C+ V+ A + + + P + TY+ ++ L +
Sbjct: 491 MLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERK 550
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +LF ML+R ++ +++L++ K N +A + M IG PD +Y+I
Sbjct: 551 SERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTI 610
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + + + + M + P+ +Y +I C+ + +A+ L +EM++RG
Sbjct: 611 LINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRG 670
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y +++ +C +++A LI M ++ + PD TYN+++ R G D+A
Sbjct: 671 HLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKAL 730
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E+ M++ G P TY +M+ L K K
Sbjct: 731 EMLNEMKENGVLPDHMTY-MMLEWLLKAK 758
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 140/304 (46%), Gaps = 8/304 (2%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ D L+ ++ A F AK + ++ + L++ L + R LF
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237
Query: 68 DEMLERKCPVDILAHNSLLEAMCKA----GNID--EAHGMLREMRSIGAEPDAFSYSIFI 121
+EM P ++ + ++ CK +ID +A +L EM G P +YS +I
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C + S + S+ N + NV+ YN II LCK +++EA ++L+EM G +
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++Y+ ++ C + +V L LI M N+ P +Y+ + L + D + ++
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ + G+ + YS+++ G C +G L+ A K E MV + P S E L +
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFC-MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476
Query: 302 GLGF 305
+G
Sbjct: 477 KMGL 480
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 13/242 (5%)
Query: 62 EARKLFDEMLE--RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF +LE + ++ + L++ ++ A + + + G E S +
Sbjct: 160 DAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNF 219
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE------KVEEAYQLLD 173
+ EAN + + + MK PNVFTY ++ CK +A ++L+
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
EM G +P +Y+ + C V AL + + N + + + YN ++ L + G
Sbjct: 280 EMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----Y 289
D A +V E M+ G P V TYS+++HG C K+G +E+ E M + P Y
Sbjct: 340 ELDEALKVLEEMKSCGISPDVYTYSILIHGFC-KQGDVEKGLYLIEEMKYSNMEPSLVSY 398
Query: 290 SS 291
SS
Sbjct: 399 SS 400
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 148/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 119 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 178
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 179 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 238
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 239 LIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 298
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 299 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 358
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 359 KMLREMLSVDLKPDTGTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 416
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 115 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 174
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 175 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 234
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ C V++A+ + RM ++++PD TYN ++ L + G +A ++ + M
Sbjct: 235 TFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 294
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 295 SMKGLKPDKFTYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 334
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 27/317 (8%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVK--------------------------TYSIL 50
LH+ C H HQ AK V +S L
Sbjct: 5 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGL 64
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G +A + + E K V +LE + K G E+ G
Sbjct: 65 ITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 124
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I +H FC+ DI V D++ ++ L P+V +YN ++ + ++E ++
Sbjct: 125 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 184
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T+ ++
Sbjct: 185 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRC 244
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A E+++ M + P + TY+ +++GLC KKG L++A + M +G+ P
Sbjct: 245 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSMKGLKPDK 303
Query: 291 STVEMLRNRLVGLGFLD 307
T L + G LD
Sbjct: 304 FTYTTLIDGCCKEGDLD 320
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 18/257 (7%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+ +Y ++ L LSEA+ L ++ RK A I E
Sbjct: 1 FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKG---------SASAVFATILETK 51
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G R D + +S I A+ E+ + + L T ++ L
Sbjct: 52 GTQRS--------DIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHL 103
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E++E G + +N ++ C ++ +A + +TK + P
Sbjct: 104 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 163
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+YN ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A + F+
Sbjct: 164 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KMDDANELFD 222
Query: 280 MMVDEGIPPYSSTVEML 296
M+ +G+ P T L
Sbjct: 223 EMLVKGLIPNGVTFTTL 239
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 158/318 (49%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +F P +Y + +L L ++ + +A + K P V T+SIL+ GL G
Sbjct: 152 MRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGN 211
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEM +R D + ++ +C++ +D+A+ + +M+ G PD + +
Sbjct: 212 VKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNA 271
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ FC + + F +L ++ V +V Y+C+IR L + ++ E+ L +MIE
Sbjct: 272 LLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDN 331
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + Y ++ + +V AL L+ MT+ V+PD YN+++K +G A
Sbjct: 332 VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEAR 391
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + + +P+V TYS+++ G+C + G +A + F M G P + T L +
Sbjct: 392 SLQLEISRHDCFPNVKTYSILISGMC-RNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDG 450
Query: 300 LVGLGFLDIIEILADKME 317
L G L+ +L KME
Sbjct: 451 LCKTGQLEKAHLLFYKME 468
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ +L++ +G +A + F M + C D+ +N +L+ + + + A + M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ P+ ++SI I C++ ++ + D M + ++P+ FTY +I LC++++V
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++AY+L D+M + G PD + NA+L C V+ A L+ K+ + D Y+ +
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L R R++ ++ M + P V Y++M+ GL + GK+ +A + M + G
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLA-EAGKVRDALELLNEMTESG 366
Query: 286 IPPYSSTVEMLRNRLVGLGFL 306
+ P + +L +G L
Sbjct: 367 VVPDTVCYNVLIKGFCDMGLL 387
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 141/330 (42%), Gaps = 51/330 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P + L+ C + A + ++H+ P VKTYSIL+ G+ G
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGL 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM------------------ 101
+A+++F+EM + C + NSL++ +CK G +++AH +
Sbjct: 422 TRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQ 481
Query: 102 ------------------------------LREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
L ++ G P ++Y+I ++ FC+ + +
Sbjct: 482 GPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFN 541
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+++ M+ L P+ TY +I L + ++ E+AY++ D+M + G PD Y ++
Sbjct: 542 GAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMM 601
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+ C R E+ A L + + N+ ++ ++A M+ +
Sbjct: 602 TWMCRRMELPRAFSLWLKYLR-NIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLND 660
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ Y++ + GLC+ + ++ EA K F ++
Sbjct: 661 FDLGPYAIWLIGLCQTR-RVGEALKIFLIL 689
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
D+L + + LE C+ L +++ G + ++ + I + +
Sbjct: 98 TDLLINQNGLELYCQT---------LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMET 148
Query: 137 LDSMKRYNLVPNVFTYNCI-----------------------------------IRKLCK 161
SM+ ++ P+V+TYN I I LCK
Sbjct: 149 FGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCK 208
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ V++A L DEM +RG PD ++Y +++ C V+ A RL +M V PD T
Sbjct: 209 SGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVT 268
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
N +L + R D A + EK G+ V YS ++ GL + K + E+ + M
Sbjct: 269 CNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAK-RYEDVQLLYRKM 327
Query: 282 VDEGIPP--YSSTVEM 295
+++ + P Y T+ M
Sbjct: 328 IEDNVKPDVYLYTIMM 343
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 124/319 (38%), Gaps = 48/319 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV--------------KT 46
M + G PS + L+ LCK ++ AH F + P++ +
Sbjct: 432 MEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSAS 491
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
+V L D G + +A ++ ++ + I +N L+ CK GN + A+ + REM+
Sbjct: 492 LQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQ 551
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK----- 161
G PD +Y I+ ++V D M++ P+ Y ++ +C+
Sbjct: 552 FKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELP 611
Query: 162 -----------------------------NEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
++VE+A + L EM + + D Y L
Sbjct: 612 RAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLI 671
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C V AL++ + + V+ ++ L++ G DRA +V+ ++G+
Sbjct: 672 GLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLL 731
Query: 253 SVSTYSVMVHGLCKKKGKL 271
+ ++ L ++KG++
Sbjct: 732 RRRVANRILTKLVRRKGEM 750
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 32/328 (9%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + + LL AL + V +DN K P V TY++L+R L + ARK+
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML------------------------ 102
DEM + C D ++H +++ MCK G ++EA G L
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 239
Query: 103 ------REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
EM G +P+ +Y+ + AFC+A ++ +L M PNV T+ ++
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
+ ++ KV +A + M++ G P SYN ++ C ++ AL M + ++
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 359
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
P+ TY+ ++ G D A +W M+ G P+V Y+ M+ LCKK ++A
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM-MFDQAES 418
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ M+ + PP + T L RL G
Sbjct: 419 LIDKMLMDNCPPNTVTFNTLIGRLCDCG 446
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 3/314 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ G PS + L+ LC +K A FF++ K + P TYS LV G + G+
Sbjct: 318 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 377
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +++EM C +++ + ++++ +CK D+A ++ +M P+ +++
Sbjct: 378 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + V M+R PN TYN ++ L + ++A+ ++ EM+ G
Sbjct: 438 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 497
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+YN ++ C A+ L+ RM + + PD T+N ++ + G+ A
Sbjct: 498 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 557
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RN 298
+ M +V Y++++ LC +GKL A Y M+ EGI P +T +L R
Sbjct: 558 CLLGQMNAVNCPRNVVAYTILISELC-NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA 616
Query: 299 RLVGLGFLDIIEIL 312
+G + I +
Sbjct: 617 IFTNIGTIGPIHLF 630
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV+ G++P++ ++ A CK + +++A TP V T++ LV+G + G+
Sbjct: 248 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 307
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++ M++ +++N L+ +C G++ A M+ P+A +YS
Sbjct: 308 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 367
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F A D+ + + MK PNV Y +I LCK ++A L+D+M+
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N ++ CD V AL + M + P+ TYN +L L R G A
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 487
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M GF S+ TY+ +++ LC+ + MMV +GI P + T + +
Sbjct: 488 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV-QGIQPDAFTFNAIIHA 546
Query: 300 LVGLGFLDIIEILADKME 317
G + I L +M
Sbjct: 547 YCKEGKVSIAACLLGQMN 564
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 123/266 (46%), Gaps = 19/266 (7%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER--KCPVDILAHNSLLEAMCK 91
D+A+H + VR L G++ + EM R C D L + + A +
Sbjct: 49 DSARH--------HEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALV--AAIGAFAR 98
Query: 92 AGNIDEAHGMLREMRSIGA-EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
AG+ D A +G +P Y+ + A N + +V V D+M++ + PNV+
Sbjct: 99 AGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVY 158
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
TYN +IR LC+N++V+ A ++LDEM +G +PDE S+ I++ C V A +
Sbjct: 159 TYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE- 217
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+P + +YN V+ L R V M +RG P+V TY+ +V CK + +
Sbjct: 218 ----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAR-E 272
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
L AC MV G P T L
Sbjct: 273 LRMACAILARMVSMGCTPNVLTFTAL 298
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ +KP++ L+ K+ + A FD PT T++ ++ GL VG+
Sbjct: 530 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 589
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEAR LE + +NS+++ K GNID A + REM G P+ +Y+
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 649
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC++N I + D M+ L +V Y+ +I CK +E A L E++E G
Sbjct: 650 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 709
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ YN++++ D + AL +M + + D TY ++ L++ GR A+
Sbjct: 710 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS 769
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ M +G P + T+ V+V+GLC KG+LE A K E M + + P
Sbjct: 770 DLYMEMLSKGIVPDIITFHVLVNGLC-NKGQLENARKILEEMDRKNMTP 817
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 5/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI PS+++++ LL K + A + FD A + TY+I++ L G++ EA
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEAC 489
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L D M+ + +++++N ++ C+ GN+D A + +M + +P+ +YSI I
Sbjct: 490 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGN 549
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ D + D M N+ P FT+N II LCK ++ EA L +E G P
Sbjct: 550 FKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSC 609
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN+I+ ++ AL + M + V P+ TY ++ + R D A + +
Sbjct: 610 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 669
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
M ++G V+ YS ++ G CK++ +E A F +++ G+ P Y+S + R+
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRR-DMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 726
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ I P+ + + +++ LCK + A N E F P+ TY+ +V G G
Sbjct: 565 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 624
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ EM E +++ + SL+ CK+ ID A EMR G E D +YS
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 684
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ D+ S + + L PN YN +I +E A +MI
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y ++ + A L M + ++PD T+++++ L G+ + A
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 804
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ E M+++ PSV Y+ ++ G ++G L+EA + M+D G+ P T ++L N
Sbjct: 805 KILEEMDRKNMTPSVLIYNTLIAGYF-REGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 36/311 (11%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+ LL+A + ++ A F+ + P V +IL+ L + E R L+++M+
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
R D + ++ A K G ++EA RE + G + DA +YSI I A C+ + +
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+L+ MK VP+ T+ +I + EA +L +EMI G + +++
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C + ++ AL L ++T++ + P++ TY+++++ G ++A+E++ M+ G
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432
Query: 252 PSV----------------------------------STYSVMVHGLCKKKGKLEEACKY 277
PSV TY++M+ LC K GK++EAC
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLC-KGGKMDEACSL 491
Query: 278 FEMMVDEGIPP 288
+ MV++G+ P
Sbjct: 492 LDNMVNQGMVP 502
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 125/263 (47%), Gaps = 1/263 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
+E G PS + ++ K ++ A + + + +P V TY+ L+ G +
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 660
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K DEM E+ +D+ A+++L++ CK +++ A + E+ +G P+ Y+
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I F + N++ + M + ++ TY +I L K ++ A L EM+ +G
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +++ ++ C++ ++ A +++ M ++N+ P YN ++ R G A
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 840
Query: 241 VWESMEKRGFYPSVSTYSVMVHG 263
+ + M RG P TY ++++G
Sbjct: 841 LHDEMLDRGLVPDDVTYDILING 863
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
++E G+ P+ + ++ +++ A ++ ++ P + TY+ L+ GL G
Sbjct: 705 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 764
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A L+ EML + DI+ + L+ +C G ++ A +L EM P Y+
Sbjct: 765 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 824
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
I + ++ F + D M LVP+ TY+ +I K ++
Sbjct: 825 LIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
E D ++ ++A+ AN I + ++M +++P V N ++ L + + E
Sbjct: 187 ELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRD 246
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L ++M+ RG D ++ + ++ V A + V D Y+++++ +
Sbjct: 247 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 306
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ + E+ E M++RG+ PS +T++ ++ C +G + EA + E M++ G P
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVA-CVAQGNMVEALRLKEEMINCGKP 362
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 97 EAHGMLREM--RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
E HG R++ R + + D S +F+ +++ KR++ + +N
Sbjct: 149 ETHGHARKLLNRYVSGDSDP-SPVVFVD------------HLINCAKRFDFELDHRVFNY 195
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
++ + ++E A + MI + P N +L R + L +M
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ D T +++++ ++ GR + A E + ++RG YS+++ +CKK
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS-NLG 314
Query: 275 CKYFEMMVDEGIPPYSST 292
+ E M + G P +T
Sbjct: 315 LELLEEMKERGWVPSEAT 332
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 154/305 (50%), Gaps = 6/305 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ L++ L + A F+ H+ P +TY+++++G +G
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +FD+ML+ +++ +N ++ K G ++ A +L M+ G + D ++Y+
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + F + + M + + PNV TYN II KV++A L +M+E G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN +++ ++ A +M K+ ++P+ TY + L + GR A
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M+KR ++P++ TYS ++ GLC ++G+ E+A E ++D+G P T L
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLC-QEGQAEDA----ERLLDDGCEPNVDTYTTLVRG 662
Query: 300 LVGLG 304
L G G
Sbjct: 663 LCGKG 667
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ GI+P+++ + ++ LC + V+ A + H P TY+ L+ G G
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++FD M++ C + + +++L+ +C G ++EA ML EM G EP +Y+I
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+A ++L MK+ PNV TY +I L ++ K E A + +M+ G
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y+A++ AL + M + +P+ TYN+++K +G +AT
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+++ M K G P+V TY++++H + K+G + A + EMM G+
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIH-IYFKQGYMNNAMRLLEMMKGNGL 478
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 35 NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
N ++F T+ ++S L+ LG R ++ EML ++ N++++ +C G
Sbjct: 158 NTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGK 217
Query: 95 IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNC 154
+ EA ++ + GA PD F+Y+ I C+ ++ F + D M + PN TY+
Sbjct: 218 VQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSA 277
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+I LC ++EEA +L+EMI++G P +Y + CD A++L+ +M K
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRG 337
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
P+ TY ++ L R G+F+ A V+ M G P+ TYS +++ L +G+ E A
Sbjct: 338 CGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL-YVEGRFETA 396
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
FE M+ P + T ++ +G++ + D+M ++
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA 441
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G P+ L++ LC ++ A + + PTV Y+I + L D G
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL +M +R C ++ + +L+ + + G + A G+ +M + G P A +YS
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + + + M ++ +PN TYN II+ C +++A + D+M++ G
Sbjct: 383 LINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN I+ + + +N A+RL+ M + D TY ++ R G+ + A
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + G P+V TY+ +++G K+++A F MV+ G P S T M+
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYL-TVAKVDDALALFWKMVESGNVPSSGTYNMM 558
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 6/305 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE GI P++ + +++ V A F+ + P+ TY++++ G
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +M+++ +++ + S ++ +CK G A + EM+ P+ +YS
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ R+LD PNV TY ++R LC + EA QL++ M ++G
Sbjct: 628 LIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P E Y A+L C EV AL++ M P Y ++ L + +A
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++M K+ + ++V++ GL K+G+ + + + +M T ML
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLL-KEGETDLSLELLHVMESRNCTLNFQTRVMLARE 802
Query: 300 LVGLG 304
L LG
Sbjct: 803 LSALG 807
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 5/283 (1%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
K HV A Q + + +++ Y+ L+ G G+L EA+ + M +D++
Sbjct: 167 KAGHVLTAEQLVEELQPRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVV 226
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
N+LL G ++A + +M G P+A SY+ I + RV M+
Sbjct: 227 FNTLLAGFVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMR 286
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R P+ TY ++ CK K+ + Y+ LD M G D Y+ H + ++
Sbjct: 287 RKGCAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLE 346
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L L+ RM + PD YN+V++L R+G +A +W ME G P V T++++V
Sbjct: 347 ECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVV 406
Query: 262 HGLCKKKGKLEEACKYFEMMVDEG---IPPYSSTVEMLRNRLV 301
GL +G L EAC YF+ MV G +P Y ++L N LV
Sbjct: 407 SGLV-GQGLLIEACSYFKDMVGRGLFVVPQYGVLKDLL-NALV 447
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 39/326 (11%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
S+ LL+ C++ + A K + V ++ L+ G G +A +L
Sbjct: 188 SLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFEDAFELA 247
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+M +R CP + +++ +L++ + G +DEA + EMR G PDA +Y ++ FC+A
Sbjct: 248 GQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKA 307
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
I + LD+M R L + Y+ K E++EE +L++ M E PD Y
Sbjct: 308 GKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIY 367
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV---------------------- 225
N ++ C E A+ L M + P T+ +V
Sbjct: 368 NVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQGLLIEACSYFKDMVG 427
Query: 226 ---------------LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
L LVR + + A +VW+ + +G +VS +++ +H L KK
Sbjct: 428 RGLFVVPQYGVLKDLLNALVRDEKLELAKDVWKCIVSKGCELNVSAWTIWIHALFAKK-H 486
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
++EAC Y M++ G+ P T L
Sbjct: 487 VKEACLYCLDMLEAGLMPQPDTFAKL 512
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H CK + +A FD+ K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E +L M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 DEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L+P++ TYN +I LCK +++A L+DEM +G
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGYLP 414
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ CK G I A + + G P S++ ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ M+ + P+V+TY+ +I LCK K+++A L DEM++ G P+
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G +A ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 SMKGLKPDKITYTTLIDGNC-KEGDLETAFEYRKRMIKENI 342
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ K + + + P V TYS+L+ GL +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML+ + + +L++ CK G +D A + R+M S PD +Y+
Sbjct: 222 MDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ TY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ P+V T
Sbjct: 402 KLLKEMQRDGYLPNVVT 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 18/257 (7%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T +I L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ C E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G D + M+ G P V TYSV+++GLCK+ K+++A F+
Sbjct: 172 VSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKES-KMDDANALFD 230
Query: 280 MMVDEGIPPYSSTVEML 296
M+D G+ P T L
Sbjct: 231 EMLDNGLVPNGVTFTTL 247
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA F+ K P+V +++ L+ G +G+
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGD 175
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 235
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ + + M +L P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 236 LIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 295
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C ++ A RM +EN+ D Y ++ L + GR+ A
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAE 355
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+V M G P TY+++++ C KKG + K + M +G P T +L N
Sbjct: 356 KVLREMLSAGLKPDTGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 135/265 (50%), Gaps = 3/265 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
+ ++G++PS+ + L++ + + + +A H P V TYS+L+ GL
Sbjct: 151 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL-KSAMHASGVQPDVYTYSVLINGLCKES 209
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ +A +LFDEML++ + + +L++ CK+G +D A + ++M S PD +Y+
Sbjct: 210 KMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYN 269
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+ D+ ++D M L P+ TY +I CK +E A++ MI+
Sbjct: 270 TLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE 329
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
D+ +Y A+++ C A +++ M + PD TY M++ + G
Sbjct: 330 NIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTG 389
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHG 263
+++ + M++ G PSV TY+V+++G
Sbjct: 390 SKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P S++ ++ +
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+++G P+
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ + M
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A ++ + M+ E I
Sbjct: 292 SMKGLKPDKITYTTLIDGCC-KEGDLETAFEHRKRMIQENI 331
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ +S L+ + G L +A + + E K V +LE M K G
Sbjct: 55 IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYE 114
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E+ G + ++I +H FC+ DI V +++ ++ L P+V ++N ++ +
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 174
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++E ++L M G PD ++Y+ ++ C ++++ A L M + ++P+ T+
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 234
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 235 TLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSM 293
Query: 284 EGIPP 288
+G+ P
Sbjct: 294 KGLKP 298
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 121/280 (43%), Gaps = 19/280 (6%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T+ +Y ++ L LSEA+ L ++ RK G+ +
Sbjct: 1 TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRK----------------GKGSASAVFAAI 44
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
E + D + +S I A+ E+ + + + T ++ + K
Sbjct: 45 LETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKL 103
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + + +E++E G + +N ++ C ++ +A + +TK + P ++
Sbjct: 104 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSF 163
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A + F+ M+
Sbjct: 164 NTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKES-KMDDANELFDEML 222
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
D+G+ P T L + G +D+ +EI + +S S
Sbjct: 223 DKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLS 262
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 139/262 (53%), Gaps = 1/262 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP + + ++H+LCK K + A + +P V TY+ LV G +G L EA
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EM + D+ N+L++A+ K G + A +L M +PD +Y+ I +
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
N + + V SM + + PNV TY +I LCK + V+EA L +EM + PD
Sbjct: 319 FFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDI 378
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +++ C + A+ L +M ++ + PD ++Y ++L L + GR + A E ++
Sbjct: 379 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438
Query: 245 MEKRGFYPSVSTYSVMVHGLCK 266
+ +G++ +V TY+VM++GLCK
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCK 460
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 146/297 (49%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ L++ C H+ A N K + P T + L++GL GE+ +A
Sbjct: 93 GATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKA 152
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + ++ +++ +L+ +CK G +LR++ +PD Y+ IH+
Sbjct: 153 LYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHS 212
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + + M + PNV TYN ++ C ++EA+ LL+EM + NPD
Sbjct: 213 LCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPD 272
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ ++ A ++ M K + PD TYN ++ + + A V+
Sbjct: 273 VCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY 332
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
SM + G P+V TY+ M+ GLCK+K ++EA FE M + + P Y+S ++ L
Sbjct: 333 SMAQSGVTPNVRTYTTMIDGLCKEK-MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGL 388
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 33/326 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ IKP + + L+ VK A + F+ A+ TP V+TY+ ++ GL
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM 358
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+EM + DI+ + SL++ +CK +++ A + ++M+ G +PD +SY+I
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ A C+ + + + K Y+L NV TYN +I LCK + EA L +M
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHL--NVQTYNVMINGLCKADLFGEAMDLKSKMEG 476
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMA---LR-LITR-------------------MTKEN 214
+G PD ++ I+ ++ E + A LR +I R MTK
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKAC 536
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ PD TY ++ V A V+ SM + G P+V Y++M+ GLCKKK ++EA
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK-TVDEA 595
Query: 275 CKYFEMMVDEGIPP----YSSTVEML 296
FE M + + P Y+S ++ L
Sbjct: 596 MSLFEEMKHKNMFPNIVTYTSLIDAL 621
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+ L+ L+ LC R +K A F D + F +Y L+ GL GE
Sbjct: 128 GYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAV 187
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ++ D++ +N+++ ++CK + +A + EM G P+ +Y+ ++
Sbjct: 188 ARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYG 247
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + F +L+ MK N+ P+V T+N +I L K K++ A +L M++ PD
Sbjct: 248 FCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPD 307
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ + +V A + M + V P+ TY ++ L + D A ++E
Sbjct: 308 VVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFE 367
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTV 293
M+ + P + TY+ ++ GLCK LE A + M ++GI P YS T+
Sbjct: 368 EMKYKNMIPDIVTYTSLIDGLCKNH-HLERAIALCKKMKEQGIQPDVYSYTI 418
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 1/268 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P++ + L++ C H+K A + K P V T++ L+ LG G+
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A+ + M++ D++ +NSL++ + A + M G P+ +Y+
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + + MK N++P++ TY +I LCKN +E A L +M E+G
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 408
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +SY +L C + A R+ + + TYN+++ L + F A
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAM 468
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
++ ME +G P T+ ++ L +K
Sbjct: 469 DLKSKMEGKGCMPDAITFKTIICALFEK 496
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LCK K + + H P V Y+ ++ L L +A L+ EM+ +
Sbjct: 174 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG 233
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ +N+L+ C G++ EA +L EM+ PD +++ I A + + +
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAK 293
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VL M + + P+V TYN +I KV+ A + M + G P+ +Y ++
Sbjct: 294 IVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGL 353
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C V+ A+ L M +N++PD TY ++ L + +RA + + M+++G P V
Sbjct: 354 CKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 413
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
+Y++++ LC K G+LE A ++F+ ++ +G T ++ N L L
Sbjct: 414 YSYTILLDALC-KGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKS 472
Query: 315 KME 317
KME
Sbjct: 473 KME 475
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 25/334 (7%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
P I L+ LCK H++ A K + P V +Y+IL+ L G L A++
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +L + +++ +N ++ +CKA EA + +M G PDA ++ I A E
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFE 495
Query: 127 ANDIHSVFRVLDSM-------------KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
++ ++L M K +V V T CI + + + Y L++
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555
Query: 174 E----------MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
E M + G P+ Y ++ C + V+ A+ L M +N+ P+ TY
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYT 615
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ L + +RA + + M++ G P V +Y++++ GLCK G+LE A + F+ ++
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKS-GRLEGAKEIFQRLLV 674
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+G + N L G D L KME
Sbjct: 675 KGYHLNVQVYTAMINELCKAGLFDEALDLQXKME 708
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 127/326 (38%), Gaps = 59/326 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-------------------------- 34
M E GI+P +Y LL ALCK ++ A +FF
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463
Query: 35 -------NAKHE---FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK---------- 74
+K E P T+ ++ L + E +A K+ EM+ R
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLK 523
Query: 75 -------------CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
D++ + +L++ + A + M +G P+ Y+I I
Sbjct: 524 EAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMI 583
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + + + MK N+ PN+ TY +I LCKN +E A LL EM E G
Sbjct: 584 DGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +SY +L C + A + R+ + + Y ++ L + G FD A ++
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKK 267
ME +G P T+ +++ L +K
Sbjct: 704 QXKMEDKGCMPDAVTFDIIIWALFEK 729
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
FD ML + P N +L ++ + + ++ S GA PD + +I ++ FC
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I F VL ++ + PN T N +I+ LC ++++A D+++ +G ++ S
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C E RL+ ++ +V PD YN ++ L + A +++ M
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+G P+V TY+ +V+G C G L+EA M + I P T L + L
Sbjct: 231 VKGISPNVVTYNALVYGFC-IMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDAL 283
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V TY L+ G V EL A+ +F M + ++ + +++ +CK +DEA +
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM+ P+ +Y+ I A C+ + + +L MK + + P+V++Y ++ LCK
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ ++E A ++ ++ +G + + Y A++ C + AL L +M + MPD T
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+++++ L D+A ++ M RG
Sbjct: 719 FDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 9/223 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHA---LCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV 57
M + IKP + L+ + + KH K + F+ A+ TP V+ Y+I++ GL
Sbjct: 532 MTKACIKPDVVTYGTLMDGYFLVNELKHAK--YVFYSMAQMGVTPNVQCYTIMIDGLCKK 589
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ EA LF+EM + +I+ + SL++A+CK +++ A +L+EM+ G +PD +SY
Sbjct: 590 KTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649
Query: 118 SIFIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+I + C++ + + + K Y+L NV Y +I +LCK +EA L +M
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHL--NVQVYTAMINELCKAGLFDEALDLQXKM 707
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
++G PD +++ I+ ++ E + A +++ M +M +
Sbjct: 708 EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P F +N I+ L N+ L + GA PD + N ++ C + A +
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ + K P+ T N ++K L G +A + + +GF + +Y +++GLC
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLC- 179
Query: 267 KKGKLEEACKYFEMMVDEGIPP----YSSTVEML-RNRLVG 302
K G+ + + + + P Y++ + L +N+L+G
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLG 220
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++Y L+ LC +KVA F ++ P TY+ L+ L + + A
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + M C +I+ +N +++ C G+ +A ++ M G + +Y+ I
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + S R+LD M+ P+ ++Y +I CK K+E A+ L +EM++ G P+
Sbjct: 470 YCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E +Y A++ +C +++ A L+ M + P+ TYN+++ L + F A E+ +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M + G +P+V TY+ M+ GLC K G A + F M+++G P YSS + L
Sbjct: 590 VMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ GI P+ + + ALC + A + F + K++ P V TY+ L+ GL G
Sbjct: 311 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF M + + +N+L+ + + I A +L M G P+ +Y+
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C D V+++M + N+ TYN II+ C + A ++LD M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDEWSY ++ C +++ A L M + + P+ TY ++ + + D AT
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIPP 288
+ E M++ G P+V TY+V++HGL K+ EE CK +M++EGI P
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFP 598
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I ++++ C K A +N + + + TY+ +++G D G + A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ D M + C D ++ L+ CK ++ A G+ EM G P+ +Y+ I
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + + +L+ MKR PNV TYN +I L K A +L MIE G P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ C ++AL + +M ++ +P+ TY+ +++ L + G+ + A ++
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+E+ G P TY M+ GK+E A + M+ G P Y ++ L+N
Sbjct: 660 ELERHGLIPDEITYVKMIEAYI-MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + +++ALCK +V A + E +P TY+ ++ G +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++F++M + C + + +++L+ +C +G ++EA ++REM G P A + +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ +R+ MK PNV+TY +I LC + ++ A L M G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ + + A ++ M + P+ TYN ++K +G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V +M +RG ++ TY+ ++ G C G A + ++M D G P
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYC-DSGNTTSALRILDLMRDGGCKP 493
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 35/254 (13%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
YS L+ L +G + + ML ++L +N+++ A+CK GN+ +A +++++
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
PD F+Y+ I C +D+ S +V + M + PN TY+ +I LC + +V
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 167 EAYQLLDEMI-----------------------------------ERGANPDEWSYNAIL 191
EA+ L+ EMI +G P+ ++Y A++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+ C + +A+ L RM+++ V P+ TYN ++ +LV R A V M + G
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS 422
Query: 252 PSVSTYSVMVHGLC 265
P++ TY+ M+ G C
Sbjct: 423 PNIVTYNEMIKGYC 436
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN----IDEAHGMLREMRSIGAEPDAF 115
++ D + + + + A+++LL + + G +D H ML E G +P+
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLL 216
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y+ I+A C+ ++ ++ + + P+ FTY +I C+ ++ A Q+ ++M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G P+ +Y+ ++ CD VN A LI M ++P HT + L +G +
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ A ++ M+ +G P+V TY+ ++ GLC G L+ A F M +G+ P + T
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLC-VSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395
Query: 296 LRNRLV 301
L N LV
Sbjct: 396 LINILV 401
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 42/341 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G +P++ + L+H L K+ + A + E P V TY+ ++ GL G
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A ++F++M+E+ C ++L ++SL+ A+ + G ++EA + E+ G PD +Y
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + F L M + P ++TY +I+ L KNE Y L D+ +
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-KNE-----YLLADQRL--A 727
Query: 180 ANPD-----EWSY-----NAILAYHCDRAEVNMALR----------------------LI 207
A PD + Y +A+ AE++ L L+
Sbjct: 728 ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 787
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + + PD+ YN +L L+RV D A V++ M +G ++ Y ++ LC+
Sbjct: 788 GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 847
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
+ +EA FE M+ P +L + L+ G+ D+
Sbjct: 848 H-RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + +KP Y + + LCK + ++ A + P TY+ L+ G + G+
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A DEM+ R + +N L+ A+ I+EA M++EMR G EPD +Y+I
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C + + D M N+ P V TY +I K ++ EA + + I+ G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +NA++ HC ++ A +L+ M V+PD T+N +++ R + + A
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M++RG P +Y+ ++ G K+G +++A + F+ M+ G P T L
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGY-SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQG 576
Query: 300 LVGLGFLDIIEILADKME 317
+G D E L +M+
Sbjct: 577 YSKIGEADHAEELLREMQ 594
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MV+ IK SI + +++ LC+ K A F + + + P V TY+ ++ G G+
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A K+F M ++ D +NS + +CK I+EA G+L ++ G P+A +Y+
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C D+ F D M +V +VFTYN +I L +++EEA ++ EM E+G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN + +C AL L M ++N+ P TY ++ + + R A
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E ++ K G P + ++ ++ G C G ++ A + + M + + P T L
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHC-VNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ GI S++ + L+HAL K ++ A + + P V TY+I + G G
Sbjct: 348 MMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN 407
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LFDEM+E+ + + SL++ K + EA ++ G PD ++
Sbjct: 408 AKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNA 467
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +I F++L M +VP+ T+N +++ C+ KVEEA +LLDEM ERG
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD SYN +++ + R ++ AL + M P TYN +++ ++G D A
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAE 587
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
E+ M+ +G P STY ++ +
Sbjct: 588 ELLREMQSKGITPDDSTYLYVIEAM 612
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 154/295 (52%), Gaps = 8/295 (2%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
D LL A C+ + A + + K +E P +T + L+ L + ++ A +++EM+
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
+ I+ N ++ +C+ G +A + M G +P+ +Y+ I+ +C
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ ++ +MK NL P+ +TYN I +LCK ++EEA +L +++E G P+ +YNA++
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C++ +++ A M ++ TYN+++ L R + A ++ + M ++G
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML--RNRL 300
P V TY++ ++G C + G ++A F+ MV++ I P Y+S +++ RNR+
Sbjct: 390 PDVVTYNIQINGYC-RCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF---DNAKHEFTPTVKTYSILVRGLGDVGELS 61
G+ P I + L+ C ++ A Q DNAK P T++ L++G ++
Sbjct: 457 GMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK--VVPDEVTFNTLMQGYCRERKVE 514
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA+KL DEM ER D +++N+L+ K G++ +A + EM S+G +P +Y+ I
Sbjct: 515 EAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
+ + + +L M+ + P+ TY +I + N+ + E
Sbjct: 575 QGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M E G + + +L LCK K V+ A++ F + F+ TY++++ G +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRT 211
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A ++ EM+ER ++ +N++L+ +AG I A EM+ E D +Y+
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H F A +I V D M R ++P+V TYN +I+ LCK + VE A + +EM+ RG
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ +YN ++ E + L+ RM E P+ TYNM+++ ++A
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG 391
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLC--KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++E M P++ TY++++ G+ K+ + A K MV+ G P T + N
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLN 451
Query: 299 RLVGLG 304
L+ G
Sbjct: 452 GLLLTG 457
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 129/255 (50%), Gaps = 2/255 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P+ KT++I+ G+ +A KLF M E C D+ + N++L+ +CK+ +++A+ +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
R +R D +Y++ ++ +C VL M + PN+ TYN +++ +
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ A++ EM +R D +Y ++ E+ A + M +E V+P T
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++++L + + A ++E M +RG+ P+V+TY+V++ GL G+ + + M
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF-HAGEFSRGEELMQRM 361
Query: 282 VDEGIPPYSSTVEML 296
+EG P T M+
Sbjct: 362 ENEGCEPNFQTYNMM 376
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 35/251 (13%)
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
++ MRS+ P +++I + A ++ +M + ++ ++N I+ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 161 KNEKVEEAYQL----------------------------------LDEMIERGANPDEWS 186
K+++VE+AY+L L EM+ERG NP+ +
Sbjct: 173 KSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN +L ++ A M K + D TY V+ G RA V++ M
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G PSV+TY+ M+ LCKK +E A FE MV G P +T +L L G
Sbjct: 293 REGVLPSVATYNAMIQVLCKKD-NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 307 DIIEILADKME 317
E L +ME
Sbjct: 352 SRGEELMQRME 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
DA S+ + I + +V+ ++ M+ + P+ T+ + + K ++A +L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
M E G D S+N IL C V A L R + D TYN++L +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLI 208
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
R +A EV + M +RG P+++TY+ M+ G + G++ A ++F
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFF-RAGQIRHAWEFF 253
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 4/293 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFT-PTVKTYSILVRGLGDVGELSEAR 64
KP++ + L+ CK + A + + ++ EF+ P + TYS L+ GL G + EA
Sbjct: 230 KPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAF 289
Query: 65 KLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF+EM+ R V D L +N L+ C+ G D A +++ M+S G P+ ++YS +
Sbjct: 290 DLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDG 349
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + VL +K L P+ TY +I LC+N K +EA +LL+EM E G D
Sbjct: 350 LCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQAD 409
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N +L C + AL ++ ++ ++ V ++ +Y +VL L + RA E+
Sbjct: 410 SVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLG 469
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +RGF P +T + ++ LC K G +++A +V+ G P T E+L
Sbjct: 470 LMLRRGFQPHYATSNELLVCLC-KAGMVDDAAVALFDLVEMGFQPGLETWEVL 521
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
P++ L+ LC+ VK A F+ ++ P TY++L+ G G+ AR
Sbjct: 267 PNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARN 326
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ M C ++ +++L++ +CK G +++A G+L E++ G +PDA +Y+ I+ C
Sbjct: 327 VIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLC 386
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+L+ MK + T+N ++ LC+ K EEA +++++ ++G ++
Sbjct: 387 RNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKG 446
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY +L + E+ A L+ M + P T N +L L + G D A +
Sbjct: 447 SYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDL 506
Query: 246 EKRGFYPSVSTYSVMVHGLCKKK 268
+ GF P + T+ V++ +C+++
Sbjct: 507 VEMGFQPGLETWEVLIGLICRER 529
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 81 AHNSLLEAMCKAGNIDEAHGML-REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
A ++ L + + +D A +L R + +P+ ++I + C+ D+ S F +++
Sbjct: 199 ALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEE 258
Query: 140 MKRYNL-VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
M+ PN+ TY+ ++ LC+N +V+EA+ L +EM+
Sbjct: 259 MRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMV---------------------- 296
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
++++++PD TYN+++ R G+ DRA V + M+ G YP+V YS
Sbjct: 297 ------------SRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYS 344
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
+V GLCK GKLE+A + G+ P + T L N L G D IE+L + E
Sbjct: 345 ALVDGLCKV-GKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKE 403
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P++Y+ L+ LCK ++ A K P TY+ L+ L G+ EA
Sbjct: 335 GCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM E C D + N LL +C+ G +EA M+ ++ G + SY I +++
Sbjct: 395 IELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNS 454
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++ +L M R P+ T N ++ LCK V++A L +++E G P
Sbjct: 455 LTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPG 514
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
++ ++ C ++ L+ + N
Sbjct: 515 LETWEVLIGLICRERKLLYVFELLDELVVTNT 546
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN---EKV 165
G + + +Y+ + N+ H+V RVL M + + +++ K+ EK+
Sbjct: 121 GFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKSSLHEKL 180
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNM 224
AY + ++ +P S L D V++A +L+ ++ P+ +N+
Sbjct: 181 LHAYFSIQPIVREKPSPKALS--TCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNI 238
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGF-YPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++K + G D A E+ E M F YP++ TYS ++ GLC + G+++EA FE MV
Sbjct: 239 LVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLC-RNGRVKEAFDLFEEMVS 297
Query: 284 -EGIPPYSSTVEMLRN 298
+ I P T +L N
Sbjct: 298 RDHIVPDPLTYNVLIN 313
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 131/248 (52%), Gaps = 1/248 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDEAHG 100
P++KT + + L G+L AR++FDEM E R ++ ++ ++++A+CKAG +D
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
ML E+ G +P +Y++ + A C++ + FR+ M++ + P+V T+ +I L
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ E+ E +L EM + G +P+E YN ++ +HC + + ALRL M + + P
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN++ K L + G +RA + E M G ++ +V L ++ +LE
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 422
Query: 281 MVDEGIPP 288
MV G+ P
Sbjct: 423 MVTRGMRP 430
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P+ + + LCK KH + +F + T + L+ GL +
Sbjct: 423 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY 482
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+ ML + +D + +N ++ CK ++EA + +M G +PD F+++
Sbjct: 483 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 542
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+HA+C + F +LD MK L P++ +Y II CK + + +A + L E+++RG
Sbjct: 543 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 602
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + YNA++ + +++ A+ + M + P TY ++ + G + A
Sbjct: 603 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 662
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + V Y++M+ G C K GK+ EA YFE M GI P T L
Sbjct: 663 TIFSQARENNVDLGVIGYTIMIQGYC-KLGKMVEAVAYFEEMRSRGISPNKLTYTTL 718
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 6/306 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDVGELS 61
G+ ++ + L+H LC+ K++K A + N E TY+I++RG ++
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSI--TYNIMIRGCCKDSKME 519
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA KL +M R D+ N+LL A C G ++E +L +M++ G +PD SY I
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+A DI L + L PNVF YN +I +N + A ++ M G
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQ 639
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y +++ + C V A + ++ + NV Y ++++ ++G+ A
Sbjct: 640 PTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAY 699
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+E M RG P+ TY+ +++ K G EEA K F+ MV G+ P + T L R
Sbjct: 700 FEEMRSRGISPNKLTYTTLMYAY-SKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCS 758
Query: 302 GLGFLD 307
+ LD
Sbjct: 759 EVNSLD 764
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 140/329 (42%), Gaps = 38/329 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P+ ++L+ C++ H A + FD + PT TY+++ + L GE
Sbjct: 317 MEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGE 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------------------------- 85
+ A ++ ++ML V N++
Sbjct: 377 MERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMT 436
Query: 86 --LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+ +CK G EA G+ + + G + + + IH CE + +V+ +M
Sbjct: 437 ACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNK 496
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ + TYN +IR CK+ K+EEA +L +M RG PD +++N +L +C+ ++
Sbjct: 497 GIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEET 556
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L+ +M E + PD +Y ++ + +A E + RG P+V Y+ ++ G
Sbjct: 557 FHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 616
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ G + A E M GI P + T
Sbjct: 617 Y-GRNGDISGAIDAVETMKSNGIQPTNVT 644
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 148/321 (46%), Gaps = 38/321 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGL------GDV 57
G++P++ + L+ ALCK V+ A + + TP+V T+ IL+ GL G+V
Sbjct: 251 GLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEV 310
Query: 58 -----------------------------GELSEARKLFDEMLERKCPVDILAHNSLLEA 88
G S+A +LFDEM+ +K + +N + +A
Sbjct: 311 GIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKA 370
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE-ANDIHSVFRVLDSMKRYNLVP 147
+CK G ++ A +L +M SIG ++ + + + SV + + M + P
Sbjct: 371 LCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRP 430
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
N +R+LCK K +EA + + + +G + + NA++ C+ + A ++I
Sbjct: 431 NDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVI 490
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + + D TYN++++ + + + A ++ M +RGF P + T++ ++H C
Sbjct: 491 QTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC-N 549
Query: 268 KGKLEEACKYFEMMVDEGIPP 288
GK+EE + M EG+ P
Sbjct: 550 LGKMEETFHLLDQMKTEGLQP 570
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 5/273 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G KP ++ + LLHA C ++ D K E P + +Y ++ G +
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 587
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A++ E+++R ++ +N+L+ + G+I A + M+S G +P +Y
Sbjct: 588 IRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGS 647
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C A + + + N+ V Y +I+ CK K+ EA +EM RG
Sbjct: 648 LMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRG 707
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P++ +Y ++ + A +L M V+PD TY ++ V D+
Sbjct: 708 ISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDI 767
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL----CKKK 268
+ Y+++ +G+ C+K+
Sbjct: 768 GHTAELSSGALTKDDRMYNILSNGINAPWCQKE 800
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTY 222
+ +A+++L RGA P + NA L +++ A + M + NV + ++Y
Sbjct: 168 RAADAFRVLSS---RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSY 224
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++K L + G+ D E+ + + G P+V TY+V++ LCK G++EEA + M
Sbjct: 225 TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKS-GRVEEAFRLKGRME 283
Query: 283 DEGIPPYSSTVEMLRNRLV 301
G+ P T +L N L
Sbjct: 284 QGGMTPSVVTFGILINGLA 302
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 158/331 (47%), Gaps = 12/331 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M + G+ P++ + L+ ALCK V A F+ +E V GL V +
Sbjct: 456 MRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE-----------VYGLCTVEKW 504
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A +L EML++ +D++ N+L+ +C+ G + EA ++ M +G PD SY+
Sbjct: 505 EKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTL 564
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ C ++LD M L PN FTYN ++ CK ++++AY LL EM+ G
Sbjct: 565 VDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP 624
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YN IL + A L M D +TYN++L L + D A +
Sbjct: 625 TPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFK 684
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+++S+ +G + T+++M+ L K GK E+A F + G+ P T ++ L
Sbjct: 685 MFQSLCSKGLQLHIITFNIMIGALL-KGGKKEDAMDLFATISAYGLVPDVETYCLIAENL 743
Query: 301 VGLGFLDIIEILADKMERSTSCTIQELANAM 331
+ G L+ + +L ME + + + NA+
Sbjct: 744 IKEGSLEELGVLFSAMEENGTAPNSRMLNAL 774
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 49/344 (14%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M EFG P++ + L+ C + A H D+ P V +Y+ ++ G
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G++ +A LF +M++R P D++ +N++++ +CKA +D A + ++M G +P +
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGT 376
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ IH + V R+L+ M ++L P+ F Y ++ LCKN + EA + D +I
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVI 436
Query: 177 ERGANPDEW---------------------SYNAILAYHCDRAEVNMAL----------- 204
+G PD +Y A++ C V+ A+
Sbjct: 437 RKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVY 496
Query: 205 ------------RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
L+ M + + D +N ++ L R GR A + E M + G P
Sbjct: 497 GLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRP 556
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
V +Y+ +V G C G+ +EA K ++MV G+ P T L
Sbjct: 557 DVISYNTLVDGHC-LTGRTDEAAKLLDVMVSIGLKPNEFTYNTL 599
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 5/254 (1%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
+ P TYSIL+ +G L +F +L+ V+ + N LL+ +C A +DEA
Sbjct: 190 KVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEA 249
Query: 99 HG-MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM---KRYNLVPNVFTYNC 154
+L M G P+ SY+ + FC N +L M + + P+V +YN
Sbjct: 250 TNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNT 309
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
+I + +V++AY L +MI+RG PD +YN ++ C V+ A + +M +
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
V P TYN ++ + G++ + E M P Y++++ LC K G+ EA
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC-KNGRCTEA 428
Query: 275 CKYFEMMVDEGIPP 288
F+ ++ +GI P
Sbjct: 429 RNIFDSVIRKGIKP 442
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 149/306 (48%), Gaps = 20/306 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI+ + + L+ LC+ V A + + + P V +Y+ LV G G
Sbjct: 514 MLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGR 573
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL D M+ + +N+LL CKA ID+A+ +LREM G PD +Y+
Sbjct: 574 TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT 633
Query: 120 FIHA------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+H F EA +++ +++S ++++ +TYN I+ LCKN V+EA+++
Sbjct: 634 ILHGLFQTGRFSEAKELY--LNMINSRTQWDM----YTYNIILNGLCKNNCVDEAFKMFQ 687
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ +G ++N ++ + A+ L ++ ++PD TY ++ + L++ G
Sbjct: 688 SLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 747
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK---KGKLEEACKYFEMMVDEGIPPYS 290
+ ++ +ME+ G P+ S M++ L ++ +G + A Y + ++ +
Sbjct: 748 SLEELGVLFSAMEENGTAPN----SRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEA 803
Query: 291 STVEML 296
ST ML
Sbjct: 804 STASML 809
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP+ + + LLH CK + + A+ + + TP V TY+ ++ GL G
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGR 643
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA++L+ M+ + D+ +N +L +CK +DEA M + + S G + +++I
Sbjct: 644 FSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNI 703
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ Y LVP+V TY I L K +EE L M E G
Sbjct: 704 MIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENG 763
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ NA++ R +++ A ++++ ++N + T +M++ L R
Sbjct: 764 TAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSR 815
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGN----------IDEAHGMLREMRSIGAE 111
+A KLFD +L P + A N LL A+ +A I M+RE S
Sbjct: 134 DALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVREC-SDKVA 192
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ- 170
PD +YSI I FC + F V + + N +N +++ LC ++++EA
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM---PDRHTYNMVLK 227
LL M E G P+ SYN ++ C+ AL L+ M + + PD +YN V+
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312
Query: 228 LLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
R G+ D+A ++ M RG P V TY+ ++ GLCK + ++ A F+ M+D+G+
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQ-VVDRAKAVFQQMLDKGVK 371
Query: 288 PYSSTVEML 296
P + T L
Sbjct: 372 PSNGTYNCL 380
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 199 EVNMALRLITRMTKE---NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
E + + L RM +E V PDR TY++++ R+GR + V+ + K G+ +
Sbjct: 172 ESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHI 231
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDE-GIPP----YSSTVEMLRNRLVGLGFLDIIE 310
++ ++ GLC K +L+EA + E G P Y++ V+ N L+++
Sbjct: 232 VFNQLLKGLCDAK-RLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLH 290
Query: 311 ILADKMERSTSC 322
++AD ++ SC
Sbjct: 291 VMAD--DQGLSC 300
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 137/263 (52%), Gaps = 8/263 (3%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---EPDAFSY 117
S ++ +EM+E D +N+ +++ CKAG + EA + MR+ G+ P A +Y
Sbjct: 390 SRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTY 449
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I A +++ F+++ M ++P+V TY +I +C KVEEAY+ L+EM
Sbjct: 450 AIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGN 509
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G PD +YN L C+ + AL L RM + +P HT+NM++ + +G D
Sbjct: 510 KGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDG 569
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A E W M+KRG TY VM+ GL C K+E+AC + +V++GI +
Sbjct: 570 AFETWHEMDKRGCARDTDTYCVMIEGLFNCN---KMEDACFLLDEVVNKGIKLPYRKFDC 626
Query: 296 LRNRLVGLGFLDIIEILADKMER 318
+L +G L I L++ M +
Sbjct: 627 FLMQLSMIGDLQAIHKLSEHMRK 649
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 10/257 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE----FTPTVKTYSILVRGLGD 56
M+E G P + + + + CK V A + F+ + + +PT KTY+I++ L
Sbjct: 399 MIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQ 458
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
E KL +M+ D+ + ++E MC AG ++EA+ L EM + G PD +
Sbjct: 459 SDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVT 518
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ F+ CE + M VP+V T+N +I + + + A++ EM
Sbjct: 519 YNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMD 578
Query: 177 ERGANPDEWSYNAILA--YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+RG D +Y ++ ++C++ E A L+ + + + ++ L L +G
Sbjct: 579 KRGCARDTDTYCVMIEGLFNCNKMED--ACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGD 636
Query: 235 FDRATEVWESMEKRGFY 251
++ E M K FY
Sbjct: 637 LQAIHKLSEHMRK--FY 651
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 149/296 (50%), Gaps = 7/296 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+ G++ + LL LC+ KHV++A + +F +KT +I++ G +G + E
Sbjct: 177 DIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWCVLGNVHE 236
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++ + +++ KC D+ + + ++A+ K G + A + R M +PD + I
Sbjct: 237 AKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIID 296
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN- 181
A C N + V M + +PN TYN +I+ + ++E+ Y+LLDEM+++ +
Sbjct: 297 ALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSC 356
Query: 182 -PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD ++N +L E+ + L RM + M TYN++L+L +R +
Sbjct: 357 MPDHITFNYLLKALKKPEELPLVLE---RMERNGCMISTDTYNLILRLYADWDCEERVGD 413
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W MEK G P +Y++M+H L +KG++ +A YF M +G+ T EML
Sbjct: 414 TWNEMEKLGLGPDRRSYTIMIHWL-YEKGRINDALHYFGEMTSKGMVSEPRT-EML 467
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 37/258 (14%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
+FG+ I ++ +L+ C +V A +F+ D + P + TY ++ L G+L
Sbjct: 213 DFGM--DIKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLG 270
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K++ M E++C D++ N +++A+C + EA + REM G P+ +Y+ I
Sbjct: 271 TALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLI 330
Query: 122 HAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVE------------- 166
F + V+ +LD M K+ + +P+ T+N +++ L K E++
Sbjct: 331 KHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYLLKALKKPEELPLVLERMERNGCMI 390
Query: 167 --EAYQLL-----------------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ Y L+ +EM + G PD SY ++ + ++ +N AL
Sbjct: 391 STDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYF 450
Query: 208 TRMTKENVMPDRHTYNMV 225
MT + ++ + T +V
Sbjct: 451 GEMTSKGMVSEPRTEMLV 468
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 109/245 (44%), Gaps = 7/245 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
A+N +L+ + K DE +L M + +Y + ++ + A+ + + ++
Sbjct: 116 AYNEILDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTR 175
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN--PDEWSYNAILAYHCDRA 198
+ L ++ ++ ++ LC+ + V+ A LL +G + D + N +L C
Sbjct: 176 RDIGLEIDLVSFQNLLMFLCRYKHVQIAESLL---YSKGKDFGMDIKTMNIVLNGWCVLG 232
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
V+ A R + PD TY +K L + G+ A +++ +M ++ P V +
Sbjct: 233 NVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICN 292
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
++ LC K ++ EA + F M +G P +T L + ++ + E+L + ++
Sbjct: 293 CIIDALC-FKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLD 351
Query: 318 RSTSC 322
+ SC
Sbjct: 352 KKGSC 356
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+KPS+ L+ AL +R + + K P + TY+I +R LG
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +F EM + C D++ + L++A+C AG +D+A + +MR+ PD +Y
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ F + D+ +V R + M+ P+V TY +I LCK+ V+ A+ +LD M +G
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ ++ AL L+ M V P +Y + + + G +A
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +E+M+KRG PS++ + ++ L + G++ EA F + G+ P S T ML
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLA-ETGRISEAEDIFNDLHKCGLSPDSVTYNML 521
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 143/275 (52%), Gaps = 3/275 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
L+ LCKRK A FD PT+++Y+ L+ GL +A +LF++M
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+ +N LL+A K+ I++ + + EMRS G EP+A +++I I A ++N+++
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ + + P TY +I L K + E+A ++ +EM++ G P+ YN ++
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
E++ A L +M KE + PD +Y ++++ L GR D A + +E ++ G P
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+Y+ +++GL K + +L+EA F M + GI P
Sbjct: 1006 TVSYNFIINGLGKSR-RLDEALSLFSEMKNRGISP 1039
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 138/257 (53%), Gaps = 1/257 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P V TY+IL+ L G++ A + D M + ++ +N+++ + KA +DEA
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+L M S+G +P AFSY +FI + ++ D ++MK+ ++P++ N + L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+ ++ EA + +++ + G +PD +YN ++ + +++ A +L++ M + PD
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
N ++ L + GR D A +++ ++ P+V TY++++ GL K+GK+ +A + F
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGL-GKEGKILKALELFG 609
Query: 280 MMVDEGIPPYSSTVEML 296
M + G PP + T L
Sbjct: 610 SMTESGCPPNTITFNSL 626
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 3/277 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+KP+ + + K A F+ K P++ + + L + G
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA +F+++ + D + +N L++ KAG ID+A +L EM S G EPD +
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +A + + +++ +K L P V TYN ++ L K K+ +A +L M E G
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N++L V++AL++ RMT N PD TYN ++ L+R GR D A
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAF 675
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ M K+ P T ++ G+ + G++E+A K
Sbjct: 676 WFFHQM-KKFLSPDYVTLCTLIPGVV-RHGRVEDAIK 710
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 132/255 (51%), Gaps = 1/255 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + ++ AL K ++ K +++ +F+PT TY L+ GL G +A
Sbjct: 861 GCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQA 920
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F+EML+ C + + +N L+ K+G ID A + ++M G PD SY+I +
Sbjct: 921 MKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVEC 980
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C I + + +K L P+ +YN II L K+ +++EA L EM RG +PD
Sbjct: 981 LCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPD 1040
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YNA++ + +V++A+++ + + P TYN +++ G D+A V++
Sbjct: 1041 LYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFK 1100
Query: 244 SMEKRGFYPSVSTYS 258
M G P+ T++
Sbjct: 1101 KMMVVGCSPNTETFA 1115
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 142/296 (47%), Gaps = 2/296 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEA 63
G P+ + + LL A K K + + + + P T++I++ L L++A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+ E++ + L++ + KAG ++A + EM G P++ Y+I I+
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F ++ +I + M + + P++ +Y ++ LC +++EA Q +E+ G +PD
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SYN I+ ++ AL L + M + PD +TYN ++ L G+ D A +++E
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ G PSV TY+ ++ G G ++A F+ M+ G P + T L N+
Sbjct: 1066 ELQLVGLEPSVFTYNALIRGH-SLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 2/245 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ TY + + L G + A +M E ++ ++N L+ + G +EA + +
Sbjct: 166 LTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYK 224
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
M S G +P +YS + A D + +L+ MK L PN++TY IR L +
Sbjct: 225 RMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRAR 284
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++++A+ + EM + G PD +Y ++ C +++ A L +M + PDR TY
Sbjct: 285 RIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ +VG + W ME G+ P V TY++++ LC K G ++ A ++M
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALC-KSGDVDRAFDMLDVMTT 403
Query: 284 EGIPP 288
+GI P
Sbjct: 404 KGIFP 408
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + +++ L K + + A F K+ +P + TY+ L+ LG G++ A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+++E+ + +N+L+ +GN D+A + ++M +G P+ +++ +
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120
Query: 124 FCEANDIHSVF 134
+ A +H+ F
Sbjct: 1121 YPRAGLVHNPF 1131
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + + N S F+++ + N V N ++ L + ++E+ + D M ++
Sbjct: 105 LKSISDPNSAFSYFKIVSQLT--NFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVI 162
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ +Y I + + A + +MT+ + + ++YN ++ LL+ G + A +
Sbjct: 163 YRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALK 221
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTV 293
V++ M G PS+ TYS ++ L ++G + E M G+ P Y+ T+
Sbjct: 222 VYKRMISEGMKPSMKTYSALMVAL-GRRGDTRKIMNLLEEMKSIGLRPNIYTYTI 275
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y ++ CK +++ A+ + E P V + LV G EL A
Sbjct: 298 GVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAA 357
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R LF M++ ++ +N L+ CK+GN+ EA G+L EM S+ PD F+Y+I I+
Sbjct: 358 RSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILING 417
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + R+ MK + P+ TYN +I CK +E+A L EM G P+
Sbjct: 418 LCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPN 477
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ ++ +C + A+ L MT + ++PD TY ++ + A ++
Sbjct: 478 IITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYS 537
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
M + G +P+ T++ +V G K+G+L +A ++
Sbjct: 538 DMLEAGIHPNDHTFACLVDGF-WKEGRLSDAIDFY 571
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M+ G+ P ++ L K+ + D P V Y+I +R L +
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENK 283
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA K+F+ M ++ ++++++ CK GN+ +A+G+ +E+ P+ +
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+A ++ + + M ++ + PN++ YNC+I CK+ + EA LL EM
Sbjct: 344 LVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y ++ C + A RL RM E + P TYN ++ + ++A
Sbjct: 404 LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKAL 463
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P++ T+S ++ G CK + YFEM + +GI P
Sbjct: 464 DLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTI-KGIVP 511
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 108/297 (36%), Gaps = 79/297 (26%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+FG+ P++Y + L+H CK ++ A + +P V TY+IL+ GL
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE-------- 111
L+EA +LF M + + +NSL+ CK NI++A + EM S G E
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFST 483
Query: 112 ---------------------------PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
PD +Y+ I A + ++ R+ M
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAG 543
Query: 145 LVPNVFTY-------------------------------------------NCIIRKLCK 161
+ PN T+ C+I LC+
Sbjct: 544 IHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQ 603
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
N + A + +M G PD WSY ++L H + + L M K ++P+
Sbjct: 604 NGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
Query: 63 ARKLFDEMLERKCP-VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ +LF+ + + + P I + L+ + G ++A + REMR PD+ + +
Sbjct: 149 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAIL 205
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ SV+ M LVP+V Y+ + + K + +LLDEM G
Sbjct: 206 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVK 265
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ + Y + C ++ A ++ M V+P+ +TY+ ++ + G +A +
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ + P+V + +V G CK + +L A F MV G+ P
Sbjct: 326 YKEILVAELLPNVVVFGTLVDGFCKAR-ELVAARSLFVHMVKFGVDP 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 70/193 (36%), Gaps = 44/193 (22%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M G++P+I L+ CK +++K A +F+ P V TY+ L+
Sbjct: 469 MTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEAN 528
Query: 60 LSEARKLFDEMLER---------KCPVD-------------------------------- 78
+ EA +L+ +MLE C VD
Sbjct: 529 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSC 588
Query: 79 --ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
+ L+E +C+ G I A +M+S G PD +SY + A I +
Sbjct: 589 WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMML 648
Query: 137 LDSMKRYNLVPNV 149
M + ++PN+
Sbjct: 649 HCDMIKTGILPNL 661
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++Y L+ LC +KVA F ++ P TY+ L+ L + + A
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + M C +I+ +N +++ C G+ +A ++ M G + +Y+ I
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + S R+LD M+ P+ ++Y +I CK K+E A+ L +EM++ G P+
Sbjct: 470 YCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E +Y A++ +C +++ A L+ M + P+ TYN+++ L + F A E+ +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M + G +P+V TY+ M+ GLC K G A + F M+++G P YSS + L
Sbjct: 590 VMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ GI P+ + + ALC + A + F + K++ P V TY+ L+ GL G
Sbjct: 311 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF M + + +N+L+ + + I A +L M G P+ +Y+
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C D V+++M + N+ TYN II+ C + A ++LD M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDEWSY ++ C +++ A L M + + P+ TY ++ + + D AT
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIPP 288
+ E M++ G P+V TY+V++HGL K+ EE CK +M++EGI P
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFP 598
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I ++++ C K A +N + + + TY+ +++G D G + A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ D M + C D ++ L+ CK ++ A G+ EM G P+ +Y+ I
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + + +L+ MKR PNV TYN +I L K A +L MIE G P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ C ++AL + +M ++ +P+ TY+ +++ L + G+ + A ++
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+E+ G P TY M+ GK+E A + M+ G P Y ++ L+N
Sbjct: 660 ELERHGLIPDEITYVKMIEAYI-MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + +++ALCK +V A + E +P TY+ ++ G +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++F++M + C + + +++L+ +C +G ++EA ++REM G P A + +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ +R+ MK PNV+TY +I LC + ++ A L M G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ + + A ++ M + P+ TYN ++K +G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V +M +RG ++ TY+ ++ G C G A + ++M D G P
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYC-DSGNTTSALRILDLMRDGGCKP 493
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
YS L+ L +G + + ML ++L +N+++ A+CK GN+ +A +++++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
PD F+Y+ I C +D+ S +V + M + PN TY+ +I LC + +V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 166 EEAYQLLDEMI-----------------------------------ERGANPDEWSYNAI 190
EA+ L+ EMI +G P+ ++Y A+
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++ C + +A+ L RM+++ V P+ TYN ++ +LV R A V M + G
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 251 YPSVSTYSVMVHGLC 265
P++ TY+ M+ G C
Sbjct: 422 SPNIVTYNEMIKGYC 436
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN----IDEAHGMLREMRSIGAEPDAF 115
++ D + + + + A+++LL + + G +D H ML E G +P+
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLL 216
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y+ I+A C+ ++ ++ + + P+ FTY +I C+ ++ A Q+ ++M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G P+ +Y+ ++ CD VN A LI M ++P HT + L +G +
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ A ++ M+ +G P+V TY+ ++ GLC G L+ A F M +G+ P + T
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLC-VSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395
Query: 296 LRNRLV 301
L N LV
Sbjct: 396 LINILV 401
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 42/341 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G +P++ + L+H L K+ + A + E P V TY+ ++ GL G
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A ++F++M+E+ C ++L ++SL+ A+ + G ++EA + E+ G PD +Y
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + F L M + P ++TY +I+ L KNE Y L D+ +
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-KNE-----YLLADQRL--A 727
Query: 180 ANPD-----EWSY-----NAILAYHCDRAEVNMAL----------------------RLI 207
A PD + Y +A+ AE++ L L+
Sbjct: 728 ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 787
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + + PD+ YN +L L+RV D A V++ M +G ++ Y ++ LC+
Sbjct: 788 GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 847
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
+ +EA FE M+ P +L + L+ G+ D+
Sbjct: 848 H-RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK +++A FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFC-KKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A + + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 SVKGLKPDKITYTTLIDGCC-KEGDLDSAFEHRKRMIQENI 348
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ LH C H HQ AK V
Sbjct: 10 PANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQR 69
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 70 SDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SVKGLKPDKITYTTLIDGCCKEGDLD 334
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 19/287 (6%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A F T+ Y ++ L LSEA+ L ++ RK A I
Sbjct: 11 ANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKG---------SASAVFAAI 61
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
E G R D + +S I A+ E+ + + + T +
Sbjct: 62 XETXGTQRS--------DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 113
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ L K + + + +E++E G + +N ++ C ++ +A + +TK +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGL 173
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P +YN ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KMDDAN 232
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
+ F+ M+ +G+ P T L + G +D+ +EI + +S S
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G ++Y + L++ CK ++ A + FD K PTV +++ L+ G VG
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L +M + + D+ +++L+ A+CK +D AHG+ EM G P+ ++
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH +I + M L P++ YN ++ CKN + A ++D MI RG
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +V AL + M + + DR ++ ++ + + GR A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
M + G P TY++M+ C KKG + K + M +G P T +L N
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFC-KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 300 LVGLGFLDIIEILADKM 316
L LG + ++L D M
Sbjct: 530 LCKLGQMKNADMLLDAM 546
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 136/291 (46%), Gaps = 1/291 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+P ++ L++ALCK + AH FD K P ++ L+ G GE+ ++
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ +ML + DI+ +N+L+ CK G++ A ++ M G PD +Y+ I FC
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ + + M + + + ++ ++ +CK +V +A + L EM+ G PD+
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ C + + +L+ M + +P TYN++L L ++G+ A + ++M
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
G P TY+ ++ G + + + E+ + + Y S V L
Sbjct: 547 LNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
KH F ++ L+ + + + E+L+ P+++ N L+ CK GNI
Sbjct: 198 KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+A + E+ +P S++ I+ +C+ ++ FR+ M++ P+VFTY+ +I
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK K++ A+ L DEM +RG P++ + ++ H E+++ +M + +
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD YN ++ + G A + + M +RG P TY+ ++ G C + G +E A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC-RGGDVETALE 436
Query: 277 YFEMMVDEGI 286
+ M GI
Sbjct: 437 IRKEMDQNGI 446
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
D+G + +A + F + + V I +LL+ M K G E+ G + +
Sbjct: 182 DLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVY 241
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
++I ++ FC+ +I +V D + + +L P V ++N +I CK ++E ++L +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ PD ++Y+A++ C +++ A L M K ++P+ + ++ R G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D E ++ M +G P + Y+ +V+G C K G L A + M+ G+ P T
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFC-KNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 296 L 296
L
Sbjct: 421 L 421
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK +++A FD K P+V +Y+ L+ G +G+
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 175
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK ID+A+ + EM G P++ +++
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 235
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 295
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN D Y ++ L R G A
Sbjct: 296 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAE 355
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 356 KMLREMLSVGLKPDARTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 413
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A + + M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+G P TY+ ++ G C K G L+ A ++ + M+ E
Sbjct: 292 SMKGLKPDKITYTTLIDGCC-KDGDLDTAFEHRKRMIQE 329
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 27/317 (8%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVK--------------------------TYSIL 50
LH+ C H HQ AK V +S L
Sbjct: 2 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGL 61
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G L +A + + E K V +LE + K G E+ G
Sbjct: 62 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 121
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I +H FC+ DI V D++ ++ L P+V +YN ++ + ++E ++
Sbjct: 122 PASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 181
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T+ ++
Sbjct: 182 LKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHC 241
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A E+++ M + P + TY+ +++GLC KKG L++A + M +G+ P
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEMSMKGLKPDK 300
Query: 291 STVEMLRNRLVGLGFLD 307
T L + G LD
Sbjct: 301 ITYTTLIDGCCKDGDLD 317
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 19/280 (6%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T+ +Y ++ L LSEA+ L ++ RK G+ +
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRK----------------GKGSASAVFAAI 44
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
E + D + +S I A+ E+ + + + T ++ L K
Sbjct: 45 FETKGT-QRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 103
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ + + +E++E G + +N ++ C ++ +A + +TK + P +Y
Sbjct: 104 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSY 163
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A + F+ M+
Sbjct: 164 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KIDDANELFDEML 222
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
+G+ P S T L + G +D+ +EI + +S S
Sbjct: 223 VKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 262
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A L+DEM+ +G
Sbjct: 253 LIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + + + M G P T +L N
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIINEFC-KKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMN 430
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+ +TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC + V++A+ + RM ++++PD TYN ++ L + G +A ++ + M
Sbjct: 249 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 VMKGLKPDKITYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 348
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
PS LH+ C H HQ F AK V
Sbjct: 10 PSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQR 69
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K G
Sbjct: 70 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLC-KKGDLKQANDLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
V +G+ P T L + G LD
Sbjct: 309 VMKGLKPDKITYTTLIDGCCKEGDLD 334
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 4/293 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P+ L+ ALC + A + + V TY L+RGL D E+ +A +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L EM E +++ ++SLL+ CK+G ++ + EM G EPD Y+ I + C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ V+D M R L PNV TYN +I +CK V+EA +L +M E+G PD
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 186 SYNAILAYHCDRAEVNMALRLITRMT--KENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ D E++ A+ L+ M K V P+ T+N V++ L +GR +A +V
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
ME+ G ++ TY++++ GL + K+ +A + + M G+ P S T +L
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVH-KVRKAMELMDEMTSLGLEPDSFTYSIL 403
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 38/356 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK-VAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E GI+P++ LL CK + V F + ++ P V Y+ L+ L VG+
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A + D M+ R +++ +N L+ MCK G++ EA G+L++M G PD +Y+
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLV-PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I + ++ +L+ M R N+V PNV T+N +I+ LC ++ +A+Q+ M E
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN ++ +V A+ L+ MT + PD TY++++K ++ + DR
Sbjct: 356 TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDR 415
Query: 238 ATEVWESMEKRGFYP----------------------------------SVSTYSVMVHG 263
A ++ +M RG P V YS M+HG
Sbjct: 416 AEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHG 475
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
C K G L+ A + + +VDEG+ P + T ++ N G ++ + +M S
Sbjct: 476 AC-KAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 44/386 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G++P++ + L++ +CK VK A ++ P V TY+ L++GL DV E
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEAH------------------ 99
+ EA L +EM+ K V +++ NS+++ +C G + +A
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365
Query: 100 -----GMLR------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
G+LR EM S+G EPD+F+YSI I FC+ + +L +M+
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ P +F Y ++ +C+ +E A L +EM + D +Y+ ++ C ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L+ + E + PD TY++V+ + + G + A V + M GF P V+ + ++
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV----GLGFLDIIEILADKMER 318
G KG++ + + M+ + I S + L LV G L + + ++ +
Sbjct: 545 GY-STKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEISK 603
Query: 319 STSCTIQELANAMRGKTGFRKSRSEE 344
+ QEL + F+ +++
Sbjct: 604 GNINSPQELMKVLHNAISFKAPSNQQ 629
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 7/270 (2%)
Query: 19 ALCKRKHVKVAHQFFDNAKHEFTPTVK---TYSILVRGLGDVGELSEARKLFDEM-LER- 73
A C +H+++ + + P+V+ +Y+ ++ L G A L M LE
Sbjct: 49 AACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPH 108
Query: 74 -KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
C + +++ L+ A+C D+A G+LR MRS G D +Y I C+A ++
Sbjct: 109 PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDK 168
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
++ M + PNV Y+ +++ CK+ + E+ ++ EM E+G PD Y ++
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + A ++ M + + P+ TYN+++ + + G A V + M ++G P
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
V TY+ ++ GL +++EA E MV
Sbjct: 289 DVVTYNTLIKGLSDVL-EMDEAMWLLEEMV 317
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 150/300 (50%), Gaps = 4/300 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
+G+K ++ L+ AL K ++ AH+ F P +T++IL+ G + +A
Sbjct: 233 YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDA 292
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R + D M + D++ + S +EA CK G+ + ML EMR G P+ +Y+I +H+
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
++ + V + MK VP+ Y+ +I L K + ++A ++ ++M +G D
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTK---ENVMPDRHTYNMVLKLLVRVGRFDRATE 240
YN +++ + MALRL+ RM E+ P+ TY +LK+ +
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 472
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ M K VSTY +++ GLC GK+EEAC +FE V +G+ P ST +ML + L
Sbjct: 473 LLHHMVKNDVSIDVSTYILLIRGLC-MSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL 531
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 5/225 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G P++ ++H+L K K V A ++ K + P K YS L+ L G
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFS 116
+A ++F++M + D+L +N+++ A + A +L+ M E P+ +
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ + C + + +L M + ++ +V TY +IR LC + KVEEA +E +
Sbjct: 454 YAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAV 513
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+G P + S +L ++ + A I + + M D H+
Sbjct: 514 RKGMVPRD-STCKMLVDELEKKNMAEAKLKIQSLVQSKTMIDSHS 557
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++Y L+ LC +KVA F ++ P TY+ L+ L + + A
Sbjct: 350 GCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + M C +I+ +N +++ C G+ +A ++ M G + +Y+ I
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ + S R+LD M+ P+ ++Y +I CK K+E A+ L +EM++ G P+
Sbjct: 470 YCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E +Y A++ +C +++ A L+ M + P+ TYN+++ L + F A E+ +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M + G +P+V TY+ M+ GLC K G A + F M+++G P YSS + L
Sbjct: 590 VMIEEGIFPNVVTYTAMIDGLC-KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ GI P+ + + ALC + A + F + K++ P V TY+ L+ GL G
Sbjct: 311 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGI 370
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF M + + +N+L+ + + I A +L M G P+ +Y+
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C D V+++M + N+ TYN II+ C + A ++LD M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDEWSY ++ C +++ A L M + + P+ TY ++ + + D AT
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK--GKLEEACKYFEMMVDEGIPP 288
+ E M++ G P+V TY+V++HGL K+ EE CK +M++EGI P
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFP 598
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+I ++++ C K A +N + + + TY+ +++G D G + A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ D M + C D ++ L+ CK ++ A G+ EM G P+ +Y+ I
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ + + +L+ MKR PNV TYN +I L K A +L MIE G P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ C ++AL + +M ++ +P+ TY+ +++ L + G+ + A ++
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
+E+ G P TY M+ GK+E A + M+ G P Y ++ L+N
Sbjct: 660 ELERHGLIPDEITYVKMIEAYI-MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P++ + +++ALCK +V A + E +P TY+ ++ G +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++F++M + C + + +++L+ +C +G ++EA ++REM G P A + +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ +R+ MK PNV+TY +I LC + ++ A L M G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ + + A ++ M + P+ TYN ++K +G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V +M +RG ++ TY+ ++ G C G A + ++M D G P
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYC-DSGNTTSALRILDLMRDGGCKP 493
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 35/255 (13%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
YS L+ L +G + + ML ++L +N+++ A+CK GN+ +A +++++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
PD F+Y+ I C +D+ S +V + M + PN TY+ +I LC + +V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 166 EEAYQLLDEMI-----------------------------------ERGANPDEWSYNAI 190
EA+ L+ EMI +G P+ ++Y A+
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
++ C + +A+ L RM+++ V P+ TYN ++ +LV R A V M + G
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 251 YPSVSTYSVMVHGLC 265
P++ TY+ M+ G C
Sbjct: 422 SPNIVTYNEMIKGYC 436
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN----IDEAHGMLREMRSIGAEPDAF 115
++ D + + + + A+++LL + + G +D H ML E G +P+
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLL 216
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
Y+ I+A C+ ++ ++ + + P+ FTY +I C+ ++ A Q+ ++M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G P+ +Y+ ++ CD VN A LI M ++P HT + L +G +
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
+ A ++ M+ +G P+V TY+ ++ GLC G L+ A F M +G+ P + T
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLC-VSGILKVAIGLFHRMSRDGVFPNTVTYNA 395
Query: 296 LRNRLV 301
L N LV
Sbjct: 396 LINILV 401
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 42/341 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G +P++ + L+H L K+ + A + E P V TY+ ++ GL G
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S A ++F++M+E+ C ++L ++SL+ A+ + G ++EA + E+ G PD +Y
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + F L M + P ++TY +I+ L KNE Y L D+ +
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-KNE-----YLLADQRL--A 727
Query: 180 ANPD-----EWSY-----NAILAYHCDRAEVNMAL----------------------RLI 207
A PD + Y +A+ AE++ L L+
Sbjct: 728 ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 787
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + + PD+ YN +L L+RV D A V++ M +G ++ Y ++ LC+
Sbjct: 788 GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 847
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
+ +EA FE M+ P +L + L+ G+ D+
Sbjct: 848 H-RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 142/288 (49%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H K +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+E +L + M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEMI +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGYKP 414
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 152/305 (49%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
++L L K K+ K+ F++ N + + ++ ++IL+ G GE+ A+ +FD + +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKW 165
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+++ N+L+ K G+++E + M++ G +PD ++YS+ I+ C+ + +
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ D M LVPN T+ +I CKN +V+ A ++ +M+ + +PD +YN ++
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + ++ A LI M + + PD+ TY ++ + G + A E + M K
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ GLC ++G+ +A K M+ G+ P T M+ N G + L
Sbjct: 346 DVAYTALISGLC-QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Query: 314 DKMER 318
+M+R
Sbjct: 405 KEMQR 409
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML++ + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ TY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLLKEMQRDGYKPSVVT 418
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 120/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G + + +M+ G P V TYSV+++GLCK+ K+++A F+
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKES-KMDDANVLFD 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D+G+ P T L + G +D+ +EI + +S S
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 37/363 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KPS+ + +++ LCK+ V+ A F+ + + P TY+ L+ G +L +A
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA 251
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FD M++ C + + +++L+ +C G I EA ML EM G EP ++Y++ I +
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + ++ SM + P+V TY II L + K+E A + +M++ G P+
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ C +AL++ M + + TYN ++K L + ++A V+
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN 431
Query: 244 SMEKRGFYPSVSTYSV-----------------------------------MVHGLCKKK 268
M K G P+V TY+ ++ G C K
Sbjct: 432 KMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC-KG 490
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA 328
GKL+ A +F M+ GI P T + + G +D+ L ++ME + E
Sbjct: 491 GKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETY 550
Query: 329 NAM 331
NA+
Sbjct: 551 NAI 553
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G P+ L++ LC + A + + PTV TY++ + L D+G
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A L M ++ C + + +++ + +AG ++ A GM +M G P+ +Y+
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNA 377
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C ++ D M+ + + N TYN II+ L + +E+A + ++M++ G
Sbjct: 378 LINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDG 437
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + R +N A R + M + N PD TY ++ + G+ D AT
Sbjct: 438 PSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSAT 497
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M K G P+ TY+ M+ G C K+GK++ A FE M + G S+++E
Sbjct: 498 SFFYEMLKCGISPNQWTYTAMIDGYC-KEGKIDVALSLFERMEENGC---SASIETYNAI 553
Query: 300 LVGL 303
+ GL
Sbjct: 554 ISGL 557
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+ +++ L+ LG ++ A+ ++ ++ +L N+++ +CK G + EA
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++ PDAF+Y+ I C + F V D M + PN TY+ +I L
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C ++ EA +L+EM E+G P ++Y ++ CD V+ A+ L+ M K+ P
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TY ++ L R G+ + A ++ M K G P+ TY+ +++ LC +G+ A K F+
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELC-TEGRFGIALKIFD 396
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
M G + T + L G+ ++ ++ +KM
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 159/380 (41%), Gaps = 42/380 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E GI+P++Y + +LC V A + K +P+V+TY+ ++ GL G+
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +ML+ + + +N+L+ +C G A + M G +A +Y+
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII----------------------- 156
I +DI V + M + P V TYN +I
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 157 ------------RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
CK K++ A EM++ G +P++W+Y A++ +C ++++AL
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L RM + TYN ++ L + RF A + M ++G P+ TY+ +++GL
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
CK A K F M + P + T L L G +D E L + T T
Sbjct: 593 CKNTAT-NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTY 651
Query: 325 QELANAMRGKTGFRKSRSEE 344
L + + R+ RS E
Sbjct: 652 STLVSGL-----CREGRSNE 666
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 145/305 (47%), Gaps = 6/305 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI P+ + ++ CK + VA F+ + + +++TY+ ++ GL
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA K +M E+ + + + SL+ +CK + A + EM P+A +Y+
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTS 622
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + R+ ++ P + TY+ ++ LC+ + EA QL++ M E+G
Sbjct: 623 LIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKG 678
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P Y ++L HC +V+ AL + M + P Y +++ L V R + A
Sbjct: 679 LSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEAL 738
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++S+ K+ + + ++V+V GL ++G + K+ +M P T +L
Sbjct: 739 NIFQSLLKKQWNSDLIVWTVLVDGLL-QEGDSDLCMKFLYLMESRNCTPSLHTYIILARE 797
Query: 300 LVGLG 304
L +G
Sbjct: 798 LSKVG 802
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 5/235 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P+ L++ LCK +A + F + K P TY+ L+ GL G+
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L E C I +++L+ +C+ G +EA ++ M+ G P Y
Sbjct: 633 VDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCS 688
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C++ + + + M P++F Y +I LC + EEA + ++++
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQ 748
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
N D + ++ + ++ ++ + M N P HTY ++ + L +VG+
Sbjct: 749 WNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+PS+ + L++ L K+ V+ A +++ +P V TY+ L+ G
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +FD M++ C + + +++L+ +C G +DEA ML EM G EP ++Y++
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C ++ MK+ PNV TY +I L + K+E A L +M++ G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ C + AL++ M + + TYN ++K L G ++A
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M K G P+V TY+ +++G KG + A + ++M + G P
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYL-TKGNVNNAARLLDLMKENGCEP 476
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 146/294 (49%), Gaps = 6/294 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ L+ L + ++VA + K P TY+ L+ L G S A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F M + +N +++ +C G+I++A + +M +G P +Y+ I+
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++++ R+LD MK P+ +TYN ++ K K+E A EM+E G NP+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY A++ H +V++AL L+ RM + P+ +YN V+ L + RF A ++ +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
M ++G P+V TY+ ++ GLC + G+ + A K F M P YSS +
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLC-RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 154/316 (48%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G S+Y + LL L K + V+ A + + P++ T++ L+ L G++ EA
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++ + D+ + SL+ C+ N+D A G+ M G +P++ +YS I+
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +L+ M + P V+TY I LC E EEA +L+ M +RG P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A+++ ++ +A+ L +M KE ++P+ TYN ++ L GRF A +++
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
ME G + TY+ ++ GLC G +E+A FE M+ G P T L N +
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLC-LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456
Query: 304 GFLDIIEILADKMERS 319
G ++ L D M+ +
Sbjct: 457 GNVNNAARLLDLMKEN 472
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 37/352 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ ++ + P ++ L+ C+ +++ +A FD K P TYS L+ GL + G
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 283
Query: 60 LSEARKLFDEMLE-----------------------------------RKCPVDILAHNS 84
+ EA + +EM+E R C ++ + +
Sbjct: 284 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 343
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ + + G ++ A G+ +M G P+ +Y+ I+ C + ++ M+ +
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ N TYN II+ LC +E+A L ++M++ G P +YN ++ + + VN A
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + PD TYN ++ + G+ + A+ ++ M + G P+ +Y+ ++ G
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K GK++ A + M + G P + + N L E + DKM
Sbjct: 524 -SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 6/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MVE G+ P+ L+ K V +A + P V++Y+ ++ GL
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA K+ D+M+E+ +++ + +L++ +C+ G A + +M P+ ++YS
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ R M P + TY+ ++ LC+ + EA QL+ +M ERG
Sbjct: 624 LIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y ++L HC EV+ AL++ + + Y ++ L + G+ + A
Sbjct: 680 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 739
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++M ++ + ++V+V GL K+G+L+ K +M + P T +L
Sbjct: 740 ALFDNMLEKEWNADEIVWTVLVDGLL-KEGELDLCMKLLHIMESKNFTPNIQTYVILGRE 798
Query: 300 LVGLGFLDIIEILADKME 317
L +G E LADK++
Sbjct: 799 LSRIGKSIESEPLADKLK 816
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P ++++ + E+ +E+ + + N+LL + K ++ A
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++M + G +P +++ I+ + + +L + +Y+L P+VFTY +I
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+N ++ A+ + D M++ G +P+ +Y+ ++ C+ V+ AL ++ M ++ + P
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+TY + + L + + A E+ M+KRG P+V TY+ ++ GL + GKLE A +
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL-SRLGKLEVAIGLYH 362
Query: 280 MMVDEGIPPYSSTVEMLRNRL-VGLGFLDIIEIL 312
M+ EG+ P + T L N L VG F ++I
Sbjct: 363 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + ++H LC + A +A E F P V Y+ L+ G +VG+L A
Sbjct: 172 GCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELA 231
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+F+ M C ++ + L+ CK+ +D A + M G P+ +Y+ I
Sbjct: 232 VDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQG 291
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +R+L SM+ LVPN +T + +I LCK+E+V EA LL +I++G +
Sbjct: 292 QCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVN 351
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E Y +++ C A RL+ + + +PD HTY+ ++ L R A V +
Sbjct: 352 EIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLD 411
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M ++G PS TY++++ L ++ G + + K + M+ GI P
Sbjct: 412 DMMEKGVQPSPVTYTIIIDELVREVGA-DGSKKILDKMIAAGIKP 455
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ + L+ C +++A F+ + +P V+TY+ L+ G +L A
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
LF M++ +++ + +L++ C G +D A+ +L+ M + G P+ ++ S+ I A
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + +L S+ + + N Y +I LCK + A +L+ ++ +G PD
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C + E++ A+ ++ M ++ V P TY +++ LVR D + ++ +
Sbjct: 387 AHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILD 446
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M G P V TY++ V C +G++E+A MVD G+ P T L L
Sbjct: 447 KMIAAGIKPDVFTYTIFVRSYC-HEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANL 505
Query: 304 GF 305
G
Sbjct: 506 GL 507
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 5/258 (1%)
Query: 43 TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
T TY+ L+ GL G + EA +F M C D + +++ +C AG EA +L
Sbjct: 141 TAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLL 200
Query: 103 REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
+ + G EP+ Y+ I +C D+ V + M PNV TY +I CK+
Sbjct: 201 SDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKS 260
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
K++ A L M++ G P+ +Y A++ C +++ A RL+ M ++P+ T
Sbjct: 261 RKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTC 320
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++++ L + R A + S+ ++G + Y+ ++ GLC K G+ A + + +V
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLC-KAGRFAAADRLMQTLV 379
Query: 283 DEGIPP----YSSTVEML 296
+G P YSS ++ L
Sbjct: 380 SQGFVPDAHTYSSLIDGL 397
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P++ L+ C + A++ + ++ P T S+L+ L
Sbjct: 273 MVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHER 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ L ++++ V+ + + SL++ +CKAG A +++ + S G PDA +YS
Sbjct: 333 VGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSS 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ VLD M + P+ TY II +L + + + ++LD+MI G
Sbjct: 393 LIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAG 452
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++Y + +C + A ++ M V P+ TYN ++ +G +A
Sbjct: 453 IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAF 512
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
++ M G P+ +Y+V++ L KK+
Sbjct: 513 STFKHMVANGCKPNEESYTVLLRLLIKKE 541
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P Y+ V G G L+ A +LF M R C + +LL +C AG + EA
Sbjct: 103 FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAM 162
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ M++ G PD Y+ +H C A +L PNV YN +I
Sbjct: 163 SVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGY 222
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C +E A + + M G +P+ +Y +++ C +++ A+ L +RM ++P+
Sbjct: 223 CNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNV 282
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TY +++ G+ D A + +SME G P+ T SV++ LCK + ++ EA
Sbjct: 283 VTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHE-RVGEAQLLLG 341
Query: 280 MMVDEGI 286
++ +GI
Sbjct: 342 SLIQKGI 348
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 4/288 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L+ L AL + + + F A ++TY+ L+ G+L +++ +L
Sbjct: 44 LNAFLMALARHRMLADMESF---ASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLR 100
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
D A+ S + C+AG + A + M G AF+Y+ +H C A +
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V M+ P+ Y ++ LC + EA LL + + G P+ YNA++
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+C+ ++ +A+ + RM P+ TY ++ + + DRA ++ M G P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+V TY+ ++ G C G+L+ A + + M + G+ P T +L + L
Sbjct: 281 NVVTYTALIQGQC-SDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDAL 327
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 3/262 (1%)
Query: 60 LSEARKLFD-EMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
L+ R L D E + P ++ + +L+ A C AG++ + L + G PD+ +Y
Sbjct: 51 LARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAY 110
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ F+ +C A + R+ M V FTY ++ LC V EA + M
Sbjct: 111 TSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQA 170
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD Y ++ C A L++ E P+ YN ++ VG +
Sbjct: 171 DGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLEL 230
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A +V+E M+ G P+V TY+ ++ G CK + KL+ A F MVD G+ P T L
Sbjct: 231 AVDVFERMDVNGCSPNVRTYTELISGFCKSR-KLDRAMMLFSRMVDAGLVPNVVTYTALI 289
Query: 298 NRLVGLGFLDIIEILADKMERS 319
G LD L ME S
Sbjct: 290 QGQCSDGQLDCAYRLLQSMENS 311
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 137/319 (42%), Gaps = 22/319 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E G++PS ++ L + + + D P V TY+I VR G
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + M++ +++ +N+L+ G +A + M + G +P+ SY++
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTV 532
Query: 120 FIHAFCE---ANDIH----SVFRV---------LDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+ + +N+I S++++ L+ M + L + YNC + LC+ +
Sbjct: 533 LLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVD 592
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++EA LL EM P E Y +I+A C + AL + M K +P +Y
Sbjct: 593 RLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYR 652
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ L G A +V+ M + + + +++ GL +KG + E +M +
Sbjct: 653 HIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGL-LQKGYVAECSSLLSVMEE 711
Query: 284 EGIPPYSSTVEMLRNRLVG 302
+ P + L RL G
Sbjct: 712 KNYRPSDA----LYARLTG 726
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK +++A FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+H+F + T ++ L + ++E+LE P + N L+ CK G+I
Sbjct: 100 EHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIR 159
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A + + G P SY+ ++ + D+ FR+ +M + P+V+TY+ +I
Sbjct: 160 LAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLI 219
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK K+++A +L DEM+ +G P+ ++ ++ HC V++A+ + +M +++
Sbjct: 220 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TYN ++ L + G +A + + M +G P TY+ ++ G C K+G L+ A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCC-KEGDLDSAFE 338
Query: 277 YFEMMVDEGI 286
+ + M+ E I
Sbjct: 339 HRKRMIQENI 348
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ + LH+ C H HQ AK V
Sbjct: 10 PANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQR 69
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V I +LE + K G
Sbjct: 70 SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHHLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SVKGLKPDKITYTTLIDGCCKEGDLD 334
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A F T+ +Y ++ L LSEA+ L ++ RK G+
Sbjct: 11 ANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRK----------------GKGSA 54
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+ E R D + +S I A+ E+ + + + + T +
Sbjct: 55 SAVFAAILETRGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKV 113
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ L K + + + +E++E G + +N ++ C ++ +A + +TK +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGL 173
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P +YN ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KMDDAN 232
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
+ F+ M+ +G+ P T L + G +D+ +EI + +S S
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 6/269 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
KP+ L+ ALC+ + K + A+ + P V TY++++ L +S A +
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F+ M E D++ +N+LL +CK G + +A + M G P +Y+ I FC
Sbjct: 67 FFETMPEP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + + +L M P V++Y II LCKN KV++AYQL +EM G PD
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ C + ++ A L+T M + + PD+ T+ +++ L R A +++ M
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
K+G P + T++V+V LC ++ KL A
Sbjct: 243 AKQGCAPDLVTHTVLVSKLCIRR-KLRPA 270
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 8/316 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P + + LL LCK V A F + + TP+ TY+ L+ + + A
Sbjct: 73 EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 132
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L M RKC + ++ S++ +CK +D+A+ + EM+ G +PD +Y+ IH C
Sbjct: 133 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 192
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+H +L M + P+ T+ +I LC ++++EA+ L M ++G PD
Sbjct: 193 VKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 252
Query: 186 SYNAILAYHCDRAEVNMALRLITR--MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ +++ C R ++ AL ++ E V+ Y + + L R FDRA + +
Sbjct: 253 THTVLVSKLCIRRKLRPALSVVRNYPACPEAVI----LYTPIFRELGRRRGFDRAARLLQ 308
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG P+V TY+ GL K + A + F M+++GI P +L +
Sbjct: 309 KMARRGVAPNVVTYTAFFKGLGDWKEGM-RAYREFRRMLEQGIEPDMVAYNVLVDGFCKA 367
Query: 304 GFLDIIEILADKMERS 319
LD+ E + M++S
Sbjct: 368 NRLDMAEKMVRYMDQS 383
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 6/302 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++Y +++ LCK + V A+Q F+ K P TY+ L+ GL L EA+ L
Sbjct: 144 PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDL 203
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M+E D + +L+E +C I EA + + M G PD ++++ + C
Sbjct: 204 LTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCI 263
Query: 127 ANDIHSVFRVLDSMKRYNLVPN-VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ V+ + Y P V Y I R+L + + A +LL +M RG P+
Sbjct: 264 RRKLRPALSVV---RNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVV 320
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y A D E A R RM ++ + PD YN+++ + R D A ++ M
Sbjct: 321 TYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYM 380
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
++ G P++ TY+ +V C+K GK+E + MV G P +T L L +G
Sbjct: 381 DQSGLPPNIVTYNTLVGHHCRK-GKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQ 439
Query: 306 LD 307
+D
Sbjct: 440 VD 441
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 5/227 (2%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
+ + C + L++ L++A+C+ G ID+A + EM PD F+Y++ I C+A
Sbjct: 1 IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I ++M P+V TYN ++ LCKN +V +A L M G P + +Y
Sbjct: 61 ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ C + A L+ M P ++Y ++ L + + D+A +++E M+ G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P TY+ ++HGLC K+ +L EA +MV+ P T L
Sbjct: 177 CKPDRVTYNTLIHGLCVKQ-RLHEAKDLLTVMVENSFQPDKITFTAL 222
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP + L+H LC ++ + A ++ F P T++ L+ GL + EA
Sbjct: 176 GCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEA 235
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMC--------------------------------- 90
LF M ++ C D++ H L+ +C
Sbjct: 236 FVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELG 295
Query: 91 KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVF 150
+ D A +L++M G P+ +Y+ F + + +R M + P++
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
YN ++ CK +++ A +++ M + G P+ +YN ++ +HC + +V L+ M
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 415
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD T++ ++ L RVG+ D A
Sbjct: 416 VSRGRQPDVATWSTLVAGLFRVGQVDAA 443
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%)
Query: 22 KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILA 81
+R + A A+ P V TY+ +GLGD E A + F MLE+ D++A
Sbjct: 297 RRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 356
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
+N L++ CKA +D A M+R M G P+ +Y+ + C + ++ +L +M
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
P+V T++ ++ L + +V+ AY L+ + +G
Sbjct: 417 SRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 144/287 (50%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+V+FG+ P+++ + L+ +LCK + A FD K P TYSIL+ G+
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A EM++ + + +NSL+ CK G+I A G + EM + EP +Y+
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C I+ R+ M + P+++T+ ++ L + + +A +L +EM E
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ +C+ +++ A + MT++ ++PD ++Y ++ L G+ A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + K + Y+ ++HG C ++GKLEEA + MV G+
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFC-REGKLEEALSVCQEMVQRGV 643
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 157/323 (48%), Gaps = 3/323 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP + L++ LCK + ++ + D F+P+ S LV GL G++ EA
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +++ ++ +N+L++++CK EA + M IG P+ +YSI I F
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + L M L +V+ YN +I CK + A + EMI + P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y +++ +C + ++N ALRL MT + + P +T+ +L L R G A +++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M + P+ TY+VM+ G C ++G + +A ++ + M ++GI P + + L + L G
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYC-EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 305 FLDIIEILADKMERSTSCTIQEL 327
++ D + + +C + E+
Sbjct: 592 QASEAKVFVDGLHKG-NCELNEI 613
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 37/335 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + L LLH L K +H +A + F D P V Y+ ++R L ++ +LS A+++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
M C V+I+ +N L++ +CK + EA G+ +++ +PD +Y ++ C+
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 127 ANDIHSVFRVLDSM--------------------KR---------------YNLVPNVFT 151
+ ++D M KR + + PN+F
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCK K EA L D M + G P++ +Y+ ++ C R +++ AL + M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + YN ++ + G A M + P+V TY+ ++ G C KGK+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC-SKGKI 488
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+A + + M +GI P T L + L G +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 156/336 (46%), Gaps = 24/336 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-----PTVKTYSILVRGLG 55
M+ ++P++ L+ C + + A + + HE T P++ T++ L+ GL
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLY----HEMTGKGIAPSIYTFTTLLSGLF 518
Query: 56 DVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
G + +A KLF+EM E + + +N ++E C+ G++ +A L+EM G PD +
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
SY IH C +D + + N N Y ++ C+ K+EEA + EM
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
++RG + D Y ++ + + L+ M + PD Y ++ + G F
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A +W+ M G P+ TY+ +++GLC K G + EA E++ + + P SS
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLC-KAGFVNEA----EVLCSK-MQPVSS---- 748
Query: 296 LRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
+ N++ FLDI+ M+++ EL NA+
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAV-----ELHNAI 779
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E+ +KP+ + ++ C+ + A +F + P +Y L+ GL G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA+ D + + C ++ + + LL C+ G ++EA + +EM G + D Y +
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + D F +L M L P+ Y +I K +EA+ + D MI G
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD--R 237
P+E +Y A++ C VN A L ++M + +P++ TY L +L + G D +
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQK 771
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A E+ ++ K G + +TY++++ G C ++G++EEA + M+ +G+ P T +
Sbjct: 772 AVELHNAILK-GLLANTATYNMLIRGFC-RQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 298 NRL 300
N L
Sbjct: 830 NEL 832
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 139/328 (42%), Gaps = 37/328 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E GI P Y L+H LC A F D K Y+ L+ G G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 60 LSEARKLFDEMLERKCPVDILAHN-----------------------------------S 84
L EA + EM++R +D++ + S
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+++A K G+ EA G+ M + G P+ +Y+ I+ C+A ++ + M+ +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
VPN TY C + L K E + L I +G + +YN ++ C + + A
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
LITRM + V PD TY ++ L R +A E+W SM ++G P Y+ ++HG
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSST 292
C G++ +A + M+ +G+ P + T
Sbjct: 868 C-VAGEMGKATELRNEMLRQGLIPNNKT 894
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 2/315 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ L+ L + ++VA + K P TY+ L+ L G S A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F M + +N +++ +C G+I++A + +M +G P +Y+ I+
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ ++++ R+LD MK P+ +TYN ++ K K+E A EM+E G NP+
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY ++ H +V++AL L+ RM + P+ +YN V+ L + RF A ++ +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M ++G P+V TY+ ++ GLC + G+ + A K F M P T L L
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLC-RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673
Query: 304 GFLDIIEILADKMER 318
G D EIL +MER
Sbjct: 674 GKADEAEILLKEMER 688
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ GI+PS+ + L++ L K+ V+ A +++ +P V TY+ L+ G
Sbjct: 231 MLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN 290
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +FD M++ C + + +++L+ +C G +DEA ML EM G EP ++Y++
Sbjct: 291 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C ++ MK+ PNV TY +I L + K+E A L +M++ G
Sbjct: 351 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 410
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ C + AL++ M + + TYN ++K L G ++A
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 470
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++E M K G P+V TY+ +++G KG + A + ++M + G P
Sbjct: 471 VLFEKMLKMGPLPTVVTYNTLINGYL-TKGNVNNAARLLDLMKENGCEP 518
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 154/316 (48%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G S+Y + LL L K + V+ A + + P++ T++ L+ L G++ EA
Sbjct: 200 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 259
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ ++ + D+ + SL+ C+ N+D A G+ M G +P++ +YS I+
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 319
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +L+ M + P V+TY I LC E EEA +L+ M +RG P+
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A+++ ++ +A+ L +M KE ++P+ TYN ++ L GRF A +++
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
ME G + TY+ ++ GLC G +E+A FE M+ G P T L N +
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLC-LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498
Query: 304 GFLDIIEILADKMERS 319
G ++ L D M+ +
Sbjct: 499 GNVNNAARLLDLMKEN 514
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 137/274 (50%), Gaps = 1/274 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M++ G P++ + L++ + +V A + D K P TY+ LV G G+
Sbjct: 476 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 535
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A F EM+E + +++ +L++ K G +D A +L M +G P+ SY+
Sbjct: 536 LESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNA 595
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ + N ++ D M L+PNV TY +I LC+N + + A+++ +M +R
Sbjct: 596 VINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 655
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y++++ C + + A L+ M ++ + PD T+ ++ V +GR D A
Sbjct: 656 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 715
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ M G P+ TYSV++ GL K+ LEE
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEE 749
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 154/352 (43%), Gaps = 37/352 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+ ++ + P ++ L+ C+ +++ +A FD K P TYS L+ GL + G
Sbjct: 266 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 325
Query: 60 LSEARKLFDEMLE-----------------------------------RKCPVDILAHNS 84
+ EA + +EM+E R C ++ + +
Sbjct: 326 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 385
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+ + + G ++ A G+ +M G P+ +Y+ I+ C + ++ M+ +
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ N TYN II+ LC +E+A L ++M++ G P +YN ++ + + VN A
Sbjct: 446 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 505
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RL+ M + PD TYN ++ + G+ + A+ ++ M + G P+ +Y+ ++ G
Sbjct: 506 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH 565
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K GK++ A E M + G P + + N L E + DKM
Sbjct: 566 -SKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 26/342 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P++ L+ LC+ + A + F D K + P + TYS L+ GL G+
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L EM + D + SL++ G ID A +LR M +G +P+ +YS+
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 120 FIHAF------------CEANDIHS------------VFRVLDSMKRYNLVPNVFTYNCI 155
+ + ++S V +L M P + TY+ +
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTL 795
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ LC+ + EA QL+ +M ERG PD Y ++L HC EV+ AL++ + +
Sbjct: 796 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 855
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
Y ++ L + G+ + A ++++M ++ + ++V+V GL K+G+L+
Sbjct: 856 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL-KEGELDLCM 914
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
K +M + P T +L L +G E LADK++
Sbjct: 915 KLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P ++++ + E+ +E+ + + N+LL + K ++ A
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++M + G +P +++ I+ + + +L + +Y+L P+VFTY +I
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+N ++ A+ + D M++ G +P+ +Y+ ++ C+ V+ AL ++ M ++ + P
Sbjct: 286 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 345
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+TY + + L + + A E+ M+KRG P+V TY+ ++ GL + GKLE A +
Sbjct: 346 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL-SRLGKLEVAIGLYH 404
Query: 280 MMVDEGIPPYSSTVEMLRNRL-VGLGFLDIIEIL 312
M+ EG+ P + T L N L VG F ++I
Sbjct: 405 KMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 438
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 12/300 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G++P+++ + L+ LC+ K ++ A + FD + ++ TY+ L+ G VGEL A
Sbjct: 206 GVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAA 265
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+ + M E+ +I+ NSLL +CK + EA +L+EM G PD ++YSI
Sbjct: 266 FKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDG 325
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+D + + + + N +T + ++ LCK KVE+A ++L + E G D
Sbjct: 326 LLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVAD 385
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E YN + +C ++N A+ I RM + P+ T+N ++ + D+A E +
Sbjct: 386 EVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVK 445
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKL---EEACKYFEMMVDEGIPP----YSSTVEML 296
M ++G PSV TY+ ++ G GKL + + E M + G+ P Y S + L
Sbjct: 446 KMAEKGVTPSVETYNTLIDGY----GKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+KP++ L++ LCK + A D P + Y++L+ G VG+
Sbjct: 482 MEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK 541
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + FDEM+ + ++ +N L++ +CK G + EA L ++ S G PD +Y+
Sbjct: 542 VKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNS 601
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + A ++ + ++MK + P V TY+ +I C E +E +L +EM++
Sbjct: 602 LISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMN 660
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YNA++ + + A L M + + PD+ TYN ++ R G+
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ +M+ + P TY ++V G C K A ++ MV+ P +S L
Sbjct: 721 DLVNNMKAKELAPKADTYDILVKGHCDLK-DFSGAYVWYREMVENNFLPNASICNELTAG 779
Query: 300 LVGLGFLDIIEILADKM 316
L G L ++++ +M
Sbjct: 780 LEQEGRLQEVQVICSEM 796
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 36/331 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M FG++P+ + L+ C K + A ++ A+ TP+V+TY+ L+ G G +
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ ++M E +++++ SL+ +CK G I EA +LR+M G P+A Y++
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + R D M R + P + TYN +I LCK K+ EA L ++ G
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Query: 180 ANPDEWSYNAILA-----------------------------YH-----CDRAEVNMALR 205
+PD +YN++++ YH C + + + +
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEK 651
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L M + N++PDR YN ++ +G +A + + M +G +P TY+ ++ G
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++GKL M + + P + T ++L
Sbjct: 712 -REGKLSNIKDLVNNMKAKELAPKADTYDIL 741
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 154/307 (50%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M E + P+I + LL LCK + +K A + + F P TYSIL GL +
Sbjct: 272 MKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDD 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L+++ E+ ++ + LL +CK G +++A +L++ G D Y+
Sbjct: 332 GNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F++ +C D++ ++ M+ + L PN T+N +I K C +++++A + + +M E+G
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ + + +++ +M + V P+ +Y ++ L + G+ A
Sbjct: 452 VTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAE 511
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
V M RG P+ Y++++ G C GK+++A ++F+ M+ I P T +L +
Sbjct: 512 IVLRDMICRGVLPNAQVYNMLIDGSC-MVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570
Query: 300 LVGLGFL 306
L G L
Sbjct: 571 LCKKGKL 577
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
E GI+ + Y LL+ LCK+ V+ A + ++ Y+ V G +G++
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A + M + + NSL++ C +D+A +++M G P +Y+
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I + + F++L+ M+ + PNV +Y +I LCK+ K+ EA +L +MI RG
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ YN ++ C +V ALR M + + P TYN+++ L + G+ A +
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ G P V TY+ ++ G G + + +E M + GI P T
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYA-NAGNVSKCLGLYETMKNLGIKPTVRT 633
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF E+ D + ++A K N+ L MR G P+ F Y++ I C
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
I ++ D M NLV ++ TYN +I CK +++ A+++ + M E+ P+
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++N++L+ C ++ A L+ M MPD +TY+++ L+R + A E++E
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++G + T S++++GLC K+GK+E+A + + + G+
Sbjct: 343 TEKGIRINNYTGSILLNGLC-KQGKVEKAEEILKKFTENGL 382
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 40/292 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P+ + L+ C VK A +FFD + E +PT+ TY++L+ GL G+
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA ++ D++ +NSL+ AGN+ + G+ M+++G +P +Y
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHP 636
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C I V ++ + M + NL+P+ YN +I + ++AY L M+++G
Sbjct: 637 LISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695
Query: 180 ANPDEWSYNAIL-----------------------------------AYHCDRAEVNMAL 204
+PD+ +YN+++ HCD + + A
Sbjct: 696 IHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAY 755
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF---YPS 253
M + N +P+ N + L + GR + M +G +PS
Sbjct: 756 VWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPS 807
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 5/260 (1%)
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
P+ I + LL CK+ + EA + MR G P S S+ V
Sbjct: 103 PLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVD 162
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+ ++ + F Y I+ K + ++ + LD M +RG P+ + YN ++ C
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ A ++ M N++ TYN ++ +VG D A ++ E M+++ P++
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV----GLGFLDIIEI 311
T++ ++ GLCK + K++EA + M G P T +L + L+ G G +++ E
Sbjct: 283 TFNSLLSGLCKMR-KMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341
Query: 312 LADKMERSTSCTIQELANAM 331
+K R + T L N +
Sbjct: 342 ATEKGIRINNYTGSILLNGL 361
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 2/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE GI P+ + L++ CK + A + F+ K + +V TYS LV GL G+
Sbjct: 249 MVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGK 308
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KL DEM + ++ NS+L CK G + +A G + M +P+ +Y+I
Sbjct: 309 VEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTI 368
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + V ++M + PN YNC+I +N LLDEM +G
Sbjct: 369 LVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG 428
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN ++ C + EV A++L+ M + P TYN ++ G A
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAY 488
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ MEK +V TY+V + LC + GK+EE + M+++G+ P T + ++
Sbjct: 489 EIRTRMEKGKKRANVVTYNVFIKCLC-RMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547
Query: 300 LVGLGF 305
++ G+
Sbjct: 548 MMEKGY 553
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 141/264 (53%), Gaps = 4/264 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARK 65
+PS + +++LL AL + V +A + F A + +P + T++I++ GL G+L +A
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCK---AGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ ++ ++ +N++++ CK AG + +L+EM G P+ ++++ ++
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
+C+ ++ + RV + MK+ + +V TY+ ++ LC KVEE +L+DEM + G P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ + N++L C + + A I M ++NV P+ TY +++ R+ + A V
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCK 266
E+M +G P+ Y+ ++ G +
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTR 410
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 5/297 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGL---GDVGELS 61
+ P ++ + ++ LCK ++ A + + P+V TY+ ++ G G G +
Sbjct: 181 VSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMY 240
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
L EM+E + + N L+ CK N A + EM+ G +YS +
Sbjct: 241 HVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALV 300
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C + +++D MK LVPN+ T N ++ CK + +A +D M ++
Sbjct: 301 WGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVK 360
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y ++ + ++ AL + M+ + V P+ YN ++ R G + + +
Sbjct: 361 PNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGL 420
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M +G + TY+V++ LC KG++ +A K + M+ G+ P T + N
Sbjct: 421 LDEMRMKGVRADIVTYNVLIGALC-VKGEVRKAVKLLDEMLMVGLEPVHLTYNTIIN 476
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +S N +L+ V++A R + V PD T+N+V+ L + G+ +A +V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCK--KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + G PSV TY+ ++ G CK + G++ + MV+ GI P T +L N
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P + +++ C++ ++K A++ K + V TY++ ++ L +G+
Sbjct: 459 MLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGK 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+ E +L +EMLE+ + + ++++ E M + G + G
Sbjct: 519 MEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVRG 559
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+ P + + LL+ CK + K A F + + PTV TY+IL+ G +G+
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR+L +EM+E+ C D+ + L++ ++ EM S G PD F+Y+
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNT 482
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A DI F++ + + + + TYN +I LCK +++A +L+ +MI G
Sbjct: 483 RICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNG 542
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y ++ HC+R + A + M + + P TY +++ R G A
Sbjct: 543 LQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAY 602
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M + G P+ TY+V++H LC + G+ + A ++F M++ G+ P T +L
Sbjct: 603 GWFRKMLEEGVEPNEITYNVLIHALC-RMGRTQLAYRHFYEMLERGLVPNKYTYTLL 658
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + L+ C+ ++ A + + + P V TY+IL++G +V L+
Sbjct: 402 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMT 461
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYSIFIH 122
R+ FDEML + D A+N+ + A G+I ++ LRE+ + G D +Y+I I
Sbjct: 462 REFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSF-QLREVIMLEGISSDTVTYNILID 520
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ ++ M L P+ TY C+I C+ + EA + ++MI G P
Sbjct: 521 GLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPP 580
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y I+ +C R + A +M +E V P+ TYN+++ L R+GR A +
Sbjct: 581 SAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHF 640
Query: 243 ESMEKRGFYPSVSTYSVMVHG 263
M +RG P+ TY++++ G
Sbjct: 641 YEMLERGLVPNKYTYTLLIDG 661
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
TY+ L+ GL G + + L EM ++ +N+++ + ++G I+ A EM
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R++G PD +Y+ ++ +C+A + + ++R L P V TYN +I C+ +
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 423
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EEA +L +EM+E+G PD ++Y ++ + + M M + + PD YN
Sbjct: 424 EEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + +G ++ ++ E + G TY++++ GLC K G L++A + M+ G
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLC-KTGNLKDAEELMMQMISNG 542
Query: 286 IPPYSSTVEMLRNRLVGLGFL 306
+ P T L + GFL
Sbjct: 543 LQPDCITYTCLIHAHCERGFL 563
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 6/268 (2%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + A H P VK + ++R L D + + EML+ I+ +N+LL++ K
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243
Query: 92 AGNIDEAHGMLREMRSIGAE--PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
G D+ +L+EM + G+ P+ +Y++ I + +++ M R + +
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKKASS 302
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
FTYN +I L V++ L EM G P +YNA++ ++ A
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M ++PD TYN +L + G A ++ + + G P+V TY++++ G C + G
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYC-RLG 421
Query: 270 KLEEACKYFEMMVDEGIPP--YSSTVEM 295
LEEA + E MV++G P Y+ T+ M
Sbjct: 422 DLEEARRLKEEMVEQGCLPDVYTYTILM 449
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+ P+++ + L+ LCK + + A + F A P TY+IL+ L G +
Sbjct: 328 ELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMD 387
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A +FD M E+ V + +NSL+ C+ N +A G+L EM G P A SYS I
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLI 447
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C D+ S + M R + NV+T+ +I CK+ ++EA +L D+MI+
Sbjct: 448 AGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+E ++N ++ +C V A +L +M + PD +TY ++ +L +A E
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEF 567
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ +E + + + +++G C K+G+L E ++ M G+
Sbjct: 568 VDDLENNCVVLNSFSLTTLMYGFC-KEGRLTETYHIWDEMRARGV 611
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 153/301 (50%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE GI L++ C+ + +++A + D+ F P+V + S +V GL G
Sbjct: 256 MVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGH 315
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L + E ++ A N+L++ +CK EA + R M + G EP+ +Y+I
Sbjct: 316 IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAI 375
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH+ C+ + + D M+ + V+ YN +I C+++ +A LL+EM+E+G
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKG 435
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SY+ ++A C + ++ A+ L M + V + +T+ ++ + G D A
Sbjct: 436 LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAA 495
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
+++ M P+ T++VM+ G C + G + +A + ++ MVD G+ P Y S + +
Sbjct: 496 RLFDKMIDSSVVPNEVTFNVMIEGYC-RVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554
Query: 296 L 296
L
Sbjct: 555 L 555
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 146/317 (46%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E GI+ ++Y + L++ C+ + A + + P+ +YS L+ GL G+
Sbjct: 396 MREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGD 455
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +L EM ++ +L+ CK GN+DEA + +M P+ ++++
Sbjct: 456 LASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNV 515
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++ F++ D M L P+ +TY +I LC +A + +D++
Sbjct: 516 MIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNC 575
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +S ++ C + + M V D ++ +++ +++ ++ +
Sbjct: 576 VVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKIS 635
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ M+++G P ++ M+ + K+ + +A ++ M+ +G P T +L N
Sbjct: 636 VLFREMKEKGVKPDNVFHTCMID-VHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINH 694
Query: 300 LVGLGFLDIIEILADKM 316
L G+L +IL ++M
Sbjct: 695 LCKSGYLSSAQILCEEM 711
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y++L+ GL + EA ++ + M+ER D + + +L+ C+ ++ A M +M
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
S+ P S S + + I FR+ + +VPN+F N +I KLCK+ +
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA +L M RG P+E +Y ++ C R ++ AL + RM ++ + + YN ++
Sbjct: 353 EAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLI 412
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ F +A + M ++G PS ++YS ++ GLC +KG L A + M G+
Sbjct: 413 NGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLC-RKGDLASAMELHREMARNGV 471
Query: 287 PPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
T L + G +D L DKM S+
Sbjct: 472 SGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 142/320 (44%), Gaps = 40/320 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSI--LVRGLGDVG 58
MV+ G+ P Y L+ LC A +F D+ ++ + ++S+ L+ G G
Sbjct: 536 MVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCV-VLNSFSLTTLMYGFCKEG 594
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD----- 113
L+E ++DEM R +D+++ ++ A K + ++ + REM+ G +PD
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHT 654
Query: 114 ------------------------------AFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+Y++ I+ C++ + S + + M
Sbjct: 655 CMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVG 714
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+PN FTYNC + L ++E+A ++L I G + ++N ++ C ++ A
Sbjct: 715 RFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGA 773
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+ L+ T+ PD +Y+ ++ L +VG ++A ++W M +G P + Y++++
Sbjct: 774 IDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR- 832
Query: 264 LCKKKGKLEEACKYFEMMVD 283
C G+ ++ + MV+
Sbjct: 833 WCNIHGEFDKGLGIYSDMVN 852
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ PS L+ LC++ + A + + A++ + V T++ L+ G G
Sbjct: 431 MVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGN 490
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA +LFD+M++ + + N ++E C+ GN+ +A + +M G PD ++Y
Sbjct: 491 MDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRS 550
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM---- 175
I C +D ++ +V N F+ ++ CK ++ E Y + DEM
Sbjct: 551 LISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610
Query: 176 -------------------------------IERGANPDEWSYNAILAYHCDRAEVNMAL 204
E+G PD + ++ H + AL
Sbjct: 611 VKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQAL 670
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+M + P+ TY +++ L + G A + E M F P+ TY+ + L
Sbjct: 671 NCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFL 730
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+G+LE+A K + EG + T L
Sbjct: 731 -ANEGELEKA-KVLHATILEGCLANTVTFNTL 760
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 36/206 (17%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
+ +L A+ K A + EM D + Y+ I A+CE ++ +L M+
Sbjct: 164 SQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMES 223
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ + YN ++ LC+N +V EA ++ + M+ERG DE +Y ++ C
Sbjct: 224 KGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFC------- 276
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
R + A E+ + M F PSV++ S MV
Sbjct: 277 ----------------------------RTEELEMALEMTDDMLSLHFVPSVASCSFMVD 308
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
GL +K+G +++A + + + G+ P
Sbjct: 309 GL-RKRGHIDKAFRLACHLGELGMVP 333
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ CK +++A FD K P+V +++ L+ G +G+L
Sbjct: 132 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 191
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+E +L M D+ ++ L+ +CK +D+ + + EM G P+ +++
Sbjct: 192 NEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTL 251
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEM +G
Sbjct: 252 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 311
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 312 KPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 371
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M G P + TY+++++ C KKG + K + M +G P T +L N
Sbjct: 372 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ + CK G I A + + G P S++ ++ +
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D++ FR+ +M+ + P+V+TY+ +I LCK K+++ +L DEM++ G P+
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ + M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y M+ E I
Sbjct: 307 SMKGLKPDKITYTTLIDGSC-KEGDLETAFEYRXRMIKENI 346
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 13 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 56
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 57 AAILETKGT-QRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 115
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ C E+ +A + +TK + P
Sbjct: 116 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSV 175
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G + + ++M+ G P V TYSV+++GLCK+ K+++ + F+
Sbjct: 176 VSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKES-KMDDXNELFD 234
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D G+ P T L + G +D+ +EI + +S S
Sbjct: 235 EMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 277
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 2/304 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ L K ++ F D + PT TY++++ GL L +A
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F++M+++ C D + + +L++ KA +DEA +L M + G EP A +Y +H
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + I+ V+ M+ P +F + ++ + EEAYQ+L EM RG PD
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 572
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y +++ V A + M ++ PD TY +++ ++G + A E+ E
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 632
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M K G P Y+ ++ G K + ++++A ++ MV GI P + T +L + L
Sbjct: 633 LMAKSGVGPDCFAYNSLMDGYVKLE-RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 691
Query: 304 GFLD 307
G D
Sbjct: 692 GKTD 695
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 166/365 (45%), Gaps = 75/365 (20%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P + + + +L+ LCK RK K F + PT+ +Y+ ++ GL + ++ EA
Sbjct: 15 GLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA 74
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F+ M++ C D++A +L+ CKAG H +L + PD F Y+ IH
Sbjct: 75 YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFLYTSVIHG 133
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD---------- 173
+C+A D+ + F++L+ M +P+ Y +I LCK +V+EAY+L +
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 174 -------------------------EMIERGANP------------------DEW----- 185
EMIERG P DE
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253
Query: 186 ------------SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+YN+++ +C V+ L+L+ +M + + PD TYN+++ R
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
R D A E+++ + G P+ +TY+ ++ GL + ++EEA +F+ +D + Y++ +
Sbjct: 314 RLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQ-RMEEAKAFFDEALD--VISYTTVI 370
Query: 294 EMLRN 298
+ L +
Sbjct: 371 KGLAD 375
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 3/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G +P ++ LL + + A+Q + P V Y+ L+ L G
Sbjct: 529 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR +FD M+E+ C D L + ++++ K GN++ A +L M G PD F+Y+
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 648
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + F V D M + PN T+N ++ L K+ K + A+ L EM+E+
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708
Query: 180 ANPDEW-SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P SY ++ V+ A M ++P+ HTY ++ L + GR A
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ E M K G P V YS ++ GL ++ A F+ M+ G P T ++LR
Sbjct: 769 KKLVEDMVKLGVNPDVQAYSALITGLIDSS-MVDTAWDVFQEMMKRGCAPNEVTYKVLRR 827
Query: 299 RLVGLG 304
G
Sbjct: 828 GFRAAG 833
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 3/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ G P L+ K + A + D + PT TY +V G +
Sbjct: 459 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 518
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA+++ +M ER C + SLL G +EA+ +L EM + G PD Y+
Sbjct: 519 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 578
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + V DSM P+ TY II+ K VE A ++L+ M + G
Sbjct: 579 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 638
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN+++ + V+ A + RM + P+ T+N+++ L + G+ DRA
Sbjct: 639 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 698
Query: 240 EVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M EK P++ +Y++++ GL K G++ EA F+ M+D GI P T L
Sbjct: 699 SLFKEMLEKDEVPPTLVSYTILIDGL-GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIY 757
Query: 299 RLVGLG 304
L G
Sbjct: 758 SLAKAG 763
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 152/314 (48%), Gaps = 10/314 (3%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
+G KP+ ++ L + ++ A FFD A V +Y+ +++GL D + EA
Sbjct: 328 YGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD-----VISYTTVIKGLADSKRIDEA 382
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF+++ C +++A+ ++++ + KAG I++ +M P +Y++ I
Sbjct: 383 CELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDG 442
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A + +V + M + VP+ TY +I K K++EA +LLD M+ +G P
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 502
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +I+ C +N A +I +M + P + +L + GR + A +V
Sbjct: 503 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 562
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M RG P V Y+ ++ L G++ EA F+ M+++G P + T + +
Sbjct: 563 EMTARGCAPDVILYTSLID-LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI 621
Query: 304 GFL----DIIEILA 313
G + +I+E++A
Sbjct: 622 GNVEAAGEILELMA 635
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ L K + A + F+ K +P V Y+ ++ GL G + + K F++M
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C + +++ +CKA + +A + +M G PD +Y+ I F +A+ +
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++LD M P TY I+ CK + + EA +++ +M ERG P + + ++L+Y+
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ A +++T MT PD Y ++ LL GR A V++SM ++G P
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY ++ K G +E A + E+M G+ P
Sbjct: 609 LTYGTIIQNF-SKIGNVEAAGEILELMAKSGVGP 641
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 4/267 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V +I++ GL ++ +A +LF EM C I+++N+++ + +DEA+
Sbjct: 18 PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD-SMKRYNLVPNVFTYNCIIRKLC 160
M G EPD +++ IH FC+A +L+ ++KR+ P+VF Y +I C
Sbjct: 78 FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR--PDVFLYTSVIHGYC 135
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++ +++L+EM+ G PD +Y ++ C V+ A L RM K + D
Sbjct: 136 KAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYV 195
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
T+ +++ L G+ D A E++ M +RG+ P + ++ LC K GK++EA + ++
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC-KAGKVDEANEIYQT 254
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+V + + L + LG +D
Sbjct: 255 VVAKKVATSRVAYNSLMDGYCKLGRVD 281
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
+ P ++ L+ L G++ EA +++ ++ +K +A+NSL++ CK G +D+
Sbjct: 225 YEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGL 284
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+L +M PD +Y+I + F AN + + + Y PN TY II+ L
Sbjct: 285 KLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGL 344
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
+++EEA DE + D SY ++ D ++ A L ++ P+
Sbjct: 345 YDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNV 398
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
Y V+ L++ GR + + +E M P+ +TY+V++ GLCK + L +ACK FE
Sbjct: 399 VAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQ-MLPDACKVFE 457
Query: 280 MMVDEGIPPYSSTVEML 296
MV +G P + T L
Sbjct: 458 QMVQKGCVPDTITYTTL 474
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA EM D++ N +L +CKA ID+A + EM S+G EP SY+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ++ +SM P+V + +I CK + + + LL++ ++R
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + Y +++ +C +++ +++ M +PD Y +++ L ++GR D A
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E M K G T+ ++ L GKL+EAC+ + M++ G PY + L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEAL-SNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 300 LVGLGFLD 307
L G +D
Sbjct: 239 LCKAGKVD 246
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P ++ K +V+ A + + AK P Y+ L+ G +
Sbjct: 599 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 658
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYS 118
+ +A ++D M+ + + N L+ + K G D A + +EM P SY+
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I +A + F M ++P TY +I L K ++ EA +L+++M++
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 778
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
G NPD +Y+A++ D + V+ A + M K P+ TY ++ + GR
Sbjct: 779 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 167/351 (47%), Gaps = 42/351 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNA---KHEFTPTVKTYSILVRGLGDVGELSE 62
I+P++ + LL LCK + A + + TP + TYS L+ G G++ E
Sbjct: 41 IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEE 100
Query: 63 ARKLFDEMLERK------------------------------------CPVDILAHNSLL 86
+R+L E++ R CP ++ N+L+
Sbjct: 101 SRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPT-LITFNTLI 159
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
C+ N++ A +L++M + G + D +Y+ + C+A + ++L+ MK
Sbjct: 160 SGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA 219
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
P+V Y+ + LCK+ KV +A+Q+L++M + +P+ +YN IL C +++ AL +
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEM 279
Query: 207 ITRM-TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ +M + + + Y+ V+ L ++GR A V E+M + G P V TYS +V+GLC
Sbjct: 280 MEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K GK+EEA + M EG P + T L + L G L E + ++M
Sbjct: 340 KA-GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 7/279 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G+K + + L+ LCK ++ A Q + K P V YS V GL G+
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
+ +A ++ ++M + +++ +N++L+ +CK+G ID A M+ +M S G + YS
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ V+++M R P+V TY+ ++ LCK K+EEA + + EM
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM-----PDRHTYNMVLKLLVRVG 233
G P+ +Y +++ C + A R++ M+ P TYN ++ L + G
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAG 417
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
R D A + ++ M +G P +YS +V GL + L+
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 3/285 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P T++ LV G G + +L + M R +++++N LLE +CK EA +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 102 LREMRSIGAE--PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+R+M S G PD +YS + +C+A + +L + L P+ Y ++ L
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
CK+ ++ EA +LL+EMI G P ++N +++ C + MA L+ +M V D
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
TYN ++ L + GR A ++ E M+ G P V YS V+GLC K GK+ +A + E
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC-KSGKVLDAHQVLE 246
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
M D P T + + L G +D + ++M S C +
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M G P++ +++ ++ F + R+L++M ++ PNV +YN ++ LCK E+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 165 VEEAYQLLDEMIERG--ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
EA +L+ +MI RG + PD +Y+ +L+ +C +V + L+ + + PD Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
V+ L + R A E+ E M + G P++ T++ ++ G C++K LE A + M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK-NLEMADSLLQKMA 179
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
G+ T L + L G L E L ++M+ S
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN------AKHEFTPTVKTYSILVRGLGDVG 58
G KP+ L+H LC + A + + H P+V TY+ L+ GL G
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAG 417
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
+ +A K F M + C D +++++++E + ++G +A +L E+R
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 7/316 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P+++ + ++ C A + D + E P V T++ L+ G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA KL DEML R D + +NS++ CK D+A M M A PD +++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C A + ++L + R LV N TYN +I C+ + + A L EMI G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N +L C+ ++ AL L + + D YN+++ + + + D A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ S+ G P V TY+VM+ G C K + +A F M D G P +ST L
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 300 LVGLGFLD-IIEILAD 314
+ G +D IE++++
Sbjct: 617 CLKAGEIDKSIELISE 632
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 48/343 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF----------------DNAKHEFTPTV 44
+ + G +P + + LLH LC + A F + TP V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
T++ L+ GL G + EA L ++M+ + +D++ + +++ MCK G+ A +L +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +PD YS I C+ + M + PNVFTYNC+I C +
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+A +LL +MIER NPD ++NA+++ ++ A +L M + PD TYN
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 225 VLKLLVRVGRFD-------------------------RATEVWESME------KRGFYPS 253
++ + RFD RA V E M+ +RG +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+TY+ ++HG C+ L A F+ M+ G+ P + T +L
Sbjct: 467 TTTYNTLIHGFCEVD-NLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 17/306 (5%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I +IY + L+ C + + F K F P V T++ L+ GL +SEA
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 65 KLF---------------DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
LF D+M+E ++ N+L+ +C G + EA ++ +M G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D +Y ++ C+ D S +L M+ ++ P+V Y+ II +LCK+ +A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L EM+E+G P+ ++YN ++ C + A RL+ M + + PD T+N ++
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ G+ A ++ + M R +P TY+ M++G CK + ++A F++M + +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN-RFDDAKHMFDLMASPDVVTF 435
Query: 290 SSTVEM 295
++ +++
Sbjct: 436 NTIIDV 441
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 11/265 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF----TPTVKTYSILVRGLGDVGELS 61
I P + +++ CK H FD+AKH F +P V T++ ++ +
Sbjct: 397 IFPDTVTYNSMIYGFCK-------HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L E+ R + +N+L+ C+ N++ A + +EM S G PD + +I +
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FCE + + + ++ + + YN II +CK KV+EA+ L + G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN +++ C ++ ++ A L +M PD TYN +++ ++ G D++ E+
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCK 266
M GF T + +C+
Sbjct: 630 ISEMRSNGFSGDAFTIKMAEEIICR 654
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 1/233 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + P + + ++ C+ K V Q + ++ TY+ L+ G +V
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+ LF EM+ D + N LL C+ ++EA + ++ + D +Y+I
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + + + + S+ + + P+V TYN +I C + +A L +M + G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
PD +YN ++ E++ ++ LI+ M D T M +++ RV
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 17/275 (6%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A FD M+ + + N ++ + D A + R+M + +S++I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY---------- 169
I FC+ + + + + P+V T+N ++ LC +++ EA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 170 -----QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
L D+M+E G P ++N ++ C V A L+ +M + + D TY
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ + ++G A + ME+ P V YS ++ LC K G +A F M+++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYLFSEMLEK 325
Query: 285 GIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
GI P T + + G + D +L D +ER
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 6 IKPSIYDLDQ-----LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
I+ S DLD ++H +CK V A F + H P V+TY++++ G
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A LF +M + D +N+L+ KAG ID++ ++ EMRS G DAF+ +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C +D + + L P + I + E EE Y + ++ R
Sbjct: 648 AEEIICRVSD--------EEIIENYLRPKINGETSSIPRYVV-ELAEELYTVEPWLLPRQ 698
Query: 180 A----NPDEWSY 187
NP EW Y
Sbjct: 699 TAPILNPGEWFY 710
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P+++ + ++ C A + D + E P V T++ L+ G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA KL DEML R D + +NS++ CK D+A M M A PD +++
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C A + ++L + R LV N TYN +I C+ + + A L EMI G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N +L C+ ++ AL L + + D YN+++ + + + D A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ S+ G P V TY+VM+ G C K + +A F M D G P +ST L
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 300 LVGLGFLD 307
+ G +D
Sbjct: 617 CLKAGEID 624
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 48/343 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF----------------DNAKHEFTPTV 44
+ + G +P + + LLH LC + A F + TP V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 45 KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
T++ L+ GL G + EA L ++M+ + +D++ + +++ MCK G+ A +L +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +PD YS I C+ + M + PNVFTYNC+I C +
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
+A +LL +MIER NPD ++NA+++ ++ A +L M + PD TYN
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 225 VLKLLVRVGRFD-------------------------RATEVWESME------KRGFYPS 253
++ + RFD RA V E M+ +RG +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+TY+ ++HG C+ L A F+ M+ G+ P + T +L
Sbjct: 467 TTTYNTLIHGFCEVD-NLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 17/306 (5%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I +IY + L+ C + + F K F P V T++ L+ GL +SEA
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 65 KLF---------------DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
LF D+M+E ++ N+L+ +C G + EA ++ +M G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
D +Y ++ C+ D S +L M+ ++ P+V Y+ II +LCK+ +A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L EM+E+G P+ ++YN ++ C + A RL+ M + + PD T+N ++
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ G+ A ++ + M R +P TY+ M++G CK + ++A F++M + +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN-RFDDAKHMFDLMASPDVVTF 435
Query: 290 SSTVEM 295
++ +++
Sbjct: 436 NTIIDV 441
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF----TPTVKTYSILVRGLGDVGELS 61
I P + +++ CK H FD+AKH F +P V T++ ++ +
Sbjct: 397 IFPDTVTYNSMIYGFCK-------HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L E+ R + +N+L+ C+ N++ A + +EM S G PD + +I +
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FCE + + + ++ + + YN II +CK KV+EA+ L + G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN +++ C ++ ++ A L +M PD TYN +++ ++ G D++ E+
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 242 WESMEKRGF 250
M GF
Sbjct: 630 ISEMRSNGF 638
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 17/275 (6%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A FD M+ + + N ++ + D A + R+M + +S++I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY---------- 169
I FC+ + + + + P+V T+N ++ LC +++ EA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 170 -----QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
L D+M+E G P ++N ++ C V A L+ +M + + D TY
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
++ + ++G A + ME+ P V YS ++ LC K G +A F M+++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYLFSEMLEK 325
Query: 285 GIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
GI P T + + G + D +L D +ER
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 154/310 (49%), Gaps = 19/310 (6%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKT-------------YSIL 50
GI ++ L+ L++ + ++ F N K + P V T Y L
Sbjct: 90 GIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTL 149
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ GL VG+ A +L + + +++ +N+++++MCK ++EA + EM S G
Sbjct: 150 INGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGI 209
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD +YS I F + + + M N+ P+V+T+N ++ CK+ K++E
Sbjct: 210 SPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 269
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+ M+++G P+ +Y +++ +C +VN A + M + V PD +YN+++
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFC 329
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP-- 288
++ + D A +++ M + P+V TY+ ++ GLC K GK+ A K + M D G+PP
Sbjct: 330 KIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC-KSGKISYALKLVDEMHDRGVPPDI 388
Query: 289 --YSSTVEML 296
YSS ++ L
Sbjct: 389 ITYSSILDAL 398
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 137/277 (49%), Gaps = 11/277 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P + L+ +K A F+ E P V T++ILV G G+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E + +F M+++ +++ + SL++ C +++A+ + M G PD SY+I
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + + M N++PNV TY +I LCK+ K+ A +L+DEM +RG
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR---------HTYNMVLKLLV 230
PD +Y++IL C +V+ A+ L+T++ K+ V D + Y ++++
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKL-KDQVFEDLFVKGYNLDVYAYTVMIQGFC 442
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
G F+ A + ME G P TY +++ L KK
Sbjct: 443 VKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKK 479
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L++ LCK + A Q + P V Y+ ++ + V ++EA L+ EM+
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++ +++L+ G + +A + +M +PD ++++I + FC+ +
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
V M + + PNV TY ++ C ++V +A + + M + G NPD SYN ++
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGF 328
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +V+ A+ L +M +N++P+ TY ++ L + G+ A ++ + M RG P +
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388
Query: 255 STYSVMVHGLCK 266
TYS ++ LCK
Sbjct: 389 ITYSSILDALCK 400
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G KP+++ + ++ +CK V+ A F+ K P TY+ ++ G G VG
Sbjct: 86 MIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGR 145
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + F+EM + C D++ +N+L+ CK G + + REM+ G +P+ SYS
Sbjct: 146 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYST 205
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ + + M+R LVPN +TY +I CK + +A++L +EM++ G
Sbjct: 206 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVG 265
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A++ C L L+ M + ++ T+ +++ L + +A
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAI 325
Query: 240 EVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + + G + + Y+ M+ GLCK ++E A FE M +G+ P + L +
Sbjct: 326 DYFGRISNDFGLQANAAIYTAMIDGLCKGN-QVEAATTLFEQMAQKGLVPDRTAYTSLMD 384
Query: 299 RLVGLGFLDIIEILA--DKM 316
G +++E LA DKM
Sbjct: 385 GNFKQG--NVLEALALRDKM 402
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 1/259 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L V+ A Q F K P ++ + L+ +G+ ++
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N +++ MCK G+++ A G+ EM+ G PD +Y+ I F +
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK P+V TYN +I CK K+ + + EM G P+ S
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + A++ M + ++P+ +TY ++ ++G A + M
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262
Query: 247 KRGFYPSVSTYSVMVHGLC 265
+ G +V TY+ ++ GLC
Sbjct: 263 QVGVEWNVVTYTALIDGLC 281
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 8/290 (2%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + L L D+G + EA + F +M + + N LL K G D
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
++M GA+P F+Y+I I C+ D+ + + + MK L+P+ TYN +I K
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++++ +EM + PD +YNA++ C ++ L M + + P+ +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ ++ + G +A + + M + G P+ TY+ ++ C K G L +A + M
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYC-KIGNLSDAFRLANEM 261
Query: 282 VDEGIP----PYSSTVEML---RNRLVGLGFLDIIEILADKMERSTSCTI 324
+ G+ Y++ ++ L N GL LD + L K+ T C +
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVL 311
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 8/253 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP++ L+ A CK ++ A +F+ D + P TY+ L+ +G LS+A
Sbjct: 195 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDA 254
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EML+ +++ + +L++ +C N E +L EM + + ++ + I
Sbjct: 255 FRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDG 314
Query: 124 FCEANDIHSVFRVLDSMKR----YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
C+ N + V + +D R + L N Y +I LCK +VE A L ++M ++G
Sbjct: 315 LCK-NKL--VSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKG 371
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +++ + + V AL L +M + + D Y ++ L + +A
Sbjct: 372 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKAR 431
Query: 240 EVWESMEKRGFYP 252
E M G +P
Sbjct: 432 SFLEEMIGEGIHP 444
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
VF VL S + VP ++ + L VEEA Q +M P S N +L
Sbjct: 10 VFDVLWSTRNV-CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLH 68
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ + R M P TYN+++ + + G + A ++E M+ RG P
Sbjct: 69 KFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIP 128
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
TY+ M+ G K G+L++ +FE M D P T L N G L
Sbjct: 129 DTVTYNSMIDGF-GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 181
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P+++ + ++ C A + D + E P V T++ L+ G+
Sbjct: 317 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA KL DEML R D + +NS++ CK D+A M M A PD +++
Sbjct: 377 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 432
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C A + ++L + R LV N TYN +I C+ + + A L EMI G
Sbjct: 433 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 492
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N +L C+ ++ AL L + + D YN+++ + + + D A
Sbjct: 493 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 552
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ S+ G P V TY+VM+ G C K + +A F M D G P +ST L
Sbjct: 553 DLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNTLIRG 611
Query: 300 LVGLGFLD 307
+ G +D
Sbjct: 612 CLKAGEID 619
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 148/338 (43%), Gaps = 43/338 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-----------DNAKHEFTPTVKTYSI 49
+ + G +P + + LLH LC + A F + TP V T++
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L+ GL G + EA L ++M+ + +D++ + +++ MCK G+ A +L +M
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+PD YS I C+ + M + PNVFTYNC+I C + +A
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+LL +MIER NPD ++NA+++ ++ A +L M + PD TYN ++
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406
Query: 230 VRVGRFD-------------------------RATEVWESME------KRGFYPSVSTYS 258
+ RFD RA V E M+ +RG + +TY+
Sbjct: 407 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 466
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++HG C+ L A F+ M+ G+ P + T +L
Sbjct: 467 TLIHGFCEVD-NLNAAQDLFQEMISHGVCPDTITCNIL 503
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 12/301 (3%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGL---------- 54
I +IY + L+ C + + F K F P V T++ L+ GL
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA 114
G + E LFD+M+E ++ N+L+ +C G + EA ++ +M G D
Sbjct: 197 ALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 256
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+Y ++ C+ D S +L M+ ++ P+V Y+ II +LCK+ +A L E
Sbjct: 257 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 316
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M+E+G P+ ++YN ++ C + A RL+ M + + PD T+N ++ V+ G+
Sbjct: 317 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 376
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A ++ + M R +P TY+ M++G CK + ++A F++M + +++ ++
Sbjct: 377 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN-RFDDAKHMFDLMASPDVVTFNTIID 435
Query: 295 M 295
+
Sbjct: 436 V 436
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF----TPTVKTYSILVRGLGDVGELS 61
I P + +++ CK H FD+AKH F +P V T++ ++ +
Sbjct: 392 IFPDTVTYNSMIYGFCK-------HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 444
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L E+ R + +N+L+ C+ N++ A + +EM S G PD + +I +
Sbjct: 445 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 504
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FCE + + + ++ + + YN II +CK KV+EA+ L + G
Sbjct: 505 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 564
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN +++ C ++ ++ A L +M PD TYN +++ ++ G D++ E+
Sbjct: 565 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 624
Query: 242 WESMEKRGF 250
M GF
Sbjct: 625 ISEMRSNGF 633
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 12/270 (4%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A FD M+ + + N ++ + D A + R+M + +S++I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY---------- 169
I FC+ + + + + P+V T+N ++ LC +++ EA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
L D+M+E G P ++N ++ C V A L+ +M + + D TY ++ +
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
++G A + ME+ P V YS ++ LC K G +A F M+++GI P
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYLFSEMLEKGIAPN 325
Query: 290 SSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T + + G + D +L D +ER
Sbjct: 326 VFTYNCMIDGFCSFGRWSDAQRLLRDMIER 355
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+I + L+ CK+ + A+ F K + F PTVKTY ++ G G+
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL EM ER V I +N++++A K G EA + M G +PD +Y+I I
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITG 321
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C ++H ++L+ + L+PN +Y +I CK + A LL +M ERG PD
Sbjct: 322 SCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPD 381
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y A++ EV++AL + +M ++ V+PD + YN+++ L + GR A +
Sbjct: 382 LVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLA 441
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + P + +V G + G EEA K FE+ +++GI P
Sbjct: 442 EMLDQNVAPDAFITATLVDGFI-RHGDFEEAKKLFELTIEKGIDP 485
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 159/311 (51%), Gaps = 4/311 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYS--ILVRGLGDVGELSEARK 65
P ++ + LL+ L K V++A + +D V Y+ I+V+GL G++ + K
Sbjct: 135 PDVFSCNSLLNVLVKHGKVEIACKVYDEMVDR-NGEVDNYTVCIMVKGLCKEGKVEDGWK 193
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L ++ R C +I+ +N+L++ CK G+ + A+ + +E++ G P +Y I+ FC
Sbjct: 194 LIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFC 253
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ V ++L M L ++ YN II K+ EA + MI+ G +PD
Sbjct: 254 KKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMA 313
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ C EV+ A +L+ + K ++P++ +Y ++ + G + RA ++ M
Sbjct: 314 TYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKM 373
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
+RG P + TY+ ++HGL G+++ A MV++G+ P ++ +L + L G
Sbjct: 374 SERGHKPDLVTYAALIHGLI-VAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGR 432
Query: 306 LDIIEILADKM 316
L ++L +M
Sbjct: 433 LPAAKVLLAEM 443
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 2/300 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
++ G+ P+ L+H CK+ ++++ ++ P + TY+ L+ GL GE+
Sbjct: 339 IKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEV 398
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A + ++M+E+ D +N L+ +CK G + A +L EM PDAF +
Sbjct: 399 DVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATL 458
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ F D ++ + + P V YN +I+ CK +++A MI+
Sbjct: 459 VDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLH 518
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PDE++Y+ I+ + +++ ALR+ M K P+ TY +++ G +RA +
Sbjct: 519 SPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEK 578
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
++ M P+V TY++++ CK L +AC +FE M+ E P T L N L
Sbjct: 579 TFKQMLSLRLKPNVVTYTILIGCFCKGV-NLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 37/332 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ SI+ + ++ A K ++ A K P + TY+IL+ G GE
Sbjct: 268 MSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGE 327
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L ++ ++R + +++ L+ CK G A +L +M G +PD +Y+
Sbjct: 328 VHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAA 387
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM---- 175
IH A ++ V + M ++P+ YN ++ LCK ++ A LL EM
Sbjct: 388 LIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQN 447
Query: 176 -------------------------------IERGANPDEWSYNAILAYHCDRAEVNMAL 204
IE+G +P YNA++ +C + AL
Sbjct: 448 VAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDAL 507
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
RM + PD TY+ ++ +++ A ++ M K P+V TY+++++G
Sbjct: 508 LCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGF 567
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
C G + A K F+ M+ + P T +L
Sbjct: 568 C-LSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 119/313 (38%), Gaps = 48/313 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P + L+ LCK+ + A + P + LV G G+
Sbjct: 408 MVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGD 467
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA+KLF+ +E+ ++ +N++++ CK G + +A + M PD F+YS
Sbjct: 468 FEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYST 527
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + ND+H R+ M + PNV TY +I C + + A + +M+
Sbjct: 528 IIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLR 587
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF---- 235
P+ +Y ++ C + A +M E +P+ TYN ++ L F
Sbjct: 588 LKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISN 647
Query: 236 -----------------------DRATEVWES--------------------MEKRGFYP 252
DR + S M +GF P
Sbjct: 648 QRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLP 707
Query: 253 SVSTYSVMVHGLC 265
+ ++HGLC
Sbjct: 708 DPVSLVALLHGLC 720
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 128/283 (45%), Gaps = 3/283 (1%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE-RKCPVDILAHNSLLEAMCKAGNIDE 97
+ PT + +S+++ D G + A + + ++ C D+ + NSLL + K G ++
Sbjct: 96 DLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEI 155
Query: 98 AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
A + EM E D ++ I + C+ + +++++ +PN+ YN +I
Sbjct: 156 ACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLID 215
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
CK E A L E+ +G P +Y AI+ C + + + +L+ M++ +
Sbjct: 216 GYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDV 275
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
H YN ++ + G A + M K G P ++TY++++ G C G++ +A +
Sbjct: 276 SIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC-SCGEVHKAEQL 334
Query: 278 FEMMVDEGIPPYS-STVEMLRNRLVGLGFLDIIEILADKMERS 319
E + G+ P S ++ N +L +++L ER
Sbjct: 335 LEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERG 377
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGEL 60
+E GI P + + ++ CK +K A F +P TYS ++ G + +L
Sbjct: 479 IEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDL 538
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A ++F M++ C +++ + L+ C +G+I+ A ++M S+ +P+ +Y+I
Sbjct: 539 HGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN----------EKVEEAYQ 170
I FC+ ++ + M +PN TYN ++ L N E+ E +
Sbjct: 599 IGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLV 658
Query: 171 L--LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L MI G + SYN+IL C V AL L +M + +PD + +L
Sbjct: 659 LESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHG 718
Query: 229 LVRVGR 234
L GR
Sbjct: 719 LCLEGR 724
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK-RGFYPSVSTYSVMVHGL 264
L+ M +++MP R +++V+ + G DRA E + + K P V + + +++ L
Sbjct: 88 LLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147
Query: 265 CKKKGKLEEACKYFEMMVD 283
K GK+E ACK ++ MVD
Sbjct: 148 V-KHGKVEIACKVYDEMVD 165
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 142/288 (49%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ K +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E +L + M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 DEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEMI +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 XPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGYMP 414
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ + K G I A + + P S++ ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ ++M+ + P+V+TY+ +I LCK K+++A L DEM+++G P+
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 IMKGLXPDKITYTTLIDGNC-KEGDLETAFEYRKRMIKENI 342
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+ ++ ++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML++ + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 MDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ TY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ +S L+ + G L +A + + E K V +LE + K G
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E G + ++I +H+F + +I V D++ +++L P+V ++N ++ K
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++E ++L + M G PD ++Y+ ++ C ++++ A L M + ++P+ T+
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFT 245
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M+
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAQDLIDEMIM 304
Query: 284 EGIPP 288
+G+ P
Sbjct: 305 KGLXP 309
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 121/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ E+ +A + +TK ++ P
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G D + +M+ G P V TYSV+++GLCK+ K+++A F+
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKES-KMDDANXLFD 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D+G+ P T L + G +D+ +EI + +S S
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 14/347 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G + + ++LL L ++ K AHQ ++ F TYS +VRG + GE +
Sbjct: 1656 GYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQ 1715
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L + M + + P + +N +L +CK G EA +L M + PD ++Y+I I+
Sbjct: 1716 ALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILIN 1775
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE----KVEEAYQLLDEMIER 178
A C+ + +++ M+ ++ TYN +I LC+ +VE A++L +EM+++
Sbjct: 1776 ALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDK 1835
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P +Y ++ A +++ M + D TYNM++ + G D+A
Sbjct: 1836 GHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKA 1895
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M RG P V TY+ +V G C K GK+EEA K F M GI P T + +
Sbjct: 1896 MDLFVEMPTRGCIPDVVTYNSIVDGFC-KAGKVEEANKLFAEMKARGIFPNGRTYTSITD 1954
Query: 299 RLVGLGFLD-----IIEILADKMERSTS--CTIQELANAMRGKTGFR 338
+ G + ++E+ + + + S I + +GK GF+
Sbjct: 1955 ACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICKLGKGKLGFQ 2001
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 39/312 (12%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
+L LCK K A + A P + TY+IL+ L VG L +A+ L + M R+
Sbjct: 1738 ILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARE 1797
Query: 75 CPVDILAHNSLLEAMCKAGN----IDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
CP DI+ +N+L+ +C+ GN ++ A + EM G P + +Y++ I A
Sbjct: 1798 CPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMD 1857
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+VLD M ++ TYN +I + K +++A L EM RG PD +YN+I
Sbjct: 1858 EQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSI 1917
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT----------- 239
+ C +V A +L M + P+ TY + ++ GR A
Sbjct: 1918 VDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL 1977
Query: 240 -----------------------EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
++ M ++GF P++ T++V+ L K+ +
Sbjct: 1978 VDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIM 2037
Query: 277 YFEMMVDEGIPP 288
E+ PP
Sbjct: 2038 IQELRQQHSSPP 2049
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 6/251 (2%)
Query: 10 IYDLDQLLHALCKRKH----VKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I + L+H LC++ + V+ A + F+ TPT TY++++ L V +A+
Sbjct: 1802 IVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQ 1861
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
K+ D M E C D++ +N L+ KAG +D+A + EM + G PD +Y+ + F
Sbjct: 1862 KVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGF 1921
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+A + ++ MK + PN TY I K ++++A+ L EM + G D
Sbjct: 1922 CKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDA 1980
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
SY A+++ C + + +L+ M ++ P+ T+N+V + L + D A + +
Sbjct: 1981 ISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQE 2040
Query: 245 MEKRGFYPSVS 255
+ ++ P ++
Sbjct: 2041 LRQQHSSPPLN 2051
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI P+ + A K ++ AH + + E +Y L+ + +G+
Sbjct: 1941 GIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICKLGKGKLGF 2000
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
+L EMLE+ +++ N + EA+ K N D+A M++E+R + P
Sbjct: 2001 QLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSP 2048
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 162/333 (48%), Gaps = 4/333 (1%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDVGELSEARKLFDE 69
L+ LL +LCK HV+VA ++FD+ K + P V+ Y+I++ G +L A +L+ E
Sbjct: 196 LEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWLE 255
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M + ++ + +L+E C+ ++ A ++ MR G EP+A Y+ I A E
Sbjct: 256 MKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGR 315
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
V +++ + P + TYN +++ CK + A ++L MI RG P +YN
Sbjct: 316 FKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNY 375
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
+ + + L T+M + PDR T++++LK+L R D A ++ + M RG
Sbjct: 376 FFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRG 435
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDII 309
++T ++++H C+ + EEA FE M+ +GI P T + L + L G ++
Sbjct: 436 CDMDLATSTMLIHLFCRMH-RFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERA 494
Query: 310 EILADKMERSTSCTIQELANAMRGKTGFRKSRS 342
L+D M T ++ G R RS
Sbjct: 495 RKLSDMMSSVPHSTNLPNTYSVEGDALRRARRS 527
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 5/189 (2%)
Query: 5 GIKPSIYDLDQLLHALCKR---KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
GI+P+ + ++ AL + K V ++F + E PT+ TY+ LV+G +
Sbjct: 295 GIEPNALVYNPIIDALAEEGRFKEVSGMMEYF--LQSESGPTISTYNSLVKGYCKAKDPV 352
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K+ M+ R +N K G I+E + +M G PD ++ + +
Sbjct: 353 GASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLL 412
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
CE + ++ M+ ++ T +I C+ + EEA+ ++MI++G
Sbjct: 413 KMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIV 472
Query: 182 PDEWSYNAI 190
P ++ +
Sbjct: 473 PQYLTFQRL 481
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 10/297 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV--KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
M + GI P++ L+ L+ A CK K H F + H P TY L+ GL
Sbjct: 175 MRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFR 234
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA++L EM + C ++ + S++ +C+ N+DEA +L +M+ EP+ F+YS
Sbjct: 235 SIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYS 294
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ FC+ +L+ M + L PN+ +Y+ ++ LC K+ EA ++ D M +
Sbjct: 295 SLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQ 354
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR-------HTYNMVLKLLVR 231
G PD Y I+ CD + A + M + P+R T+N V+ L
Sbjct: 355 GFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCT 414
Query: 232 VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ +RA +++ S+ RG +V T++ ++ C KK L + + + MV G P
Sbjct: 415 INNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKD-LPKTSRILDEMVINGCIP 470
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 136/274 (49%), Gaps = 9/274 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGL-GDVG 58
M +F KP+ +L L + +K A +F+ D K PTV + ++L++ + G
Sbjct: 140 MQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSG 199
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ +A LF M C D + +L+ +C+ +I EA +L+EM + G P +Y+
Sbjct: 200 TMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYT 259
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH C+ N++ R+L+ MK N+ PNVFTY+ ++ CK A +L+ MI++
Sbjct: 260 SIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQK 319
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ SY+ +L C+ ++N AL + RM + PD Y ++ L V RF A
Sbjct: 320 RLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEA 379
Query: 239 TEVWESMEKRGFYPSVSTYSV-------MVHGLC 265
+ M G P+ T+S+ ++HGLC
Sbjct: 380 ANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLC 413
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 139/286 (48%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSI-LVRGLGDVGELSEA 63
G K + ++ L ++A D K E + + + R G + + ++
Sbjct: 74 GFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDS 133
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++F +M + C ++ S+L + + + A R+MR +G P S ++ I A
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193
Query: 124 FCE-ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
FC+ + + + +M + P+ +TY +I LC+ + EA +LL EM +G +P
Sbjct: 194 FCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSP 253
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y +I+ C V+ A+RL+ M +N+ P+ TY+ ++ + G RA ++
Sbjct: 254 SVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDIL 313
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E M ++ P++ +YS +++GLC +GK+ EA + F+ M +G P
Sbjct: 314 ELMIQKRLRPNMISYSTLLNGLC-NEGKINEALEIFDRMKLQGFKP 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G PS+ ++H LC+ +V A + ++ K + P V TYS L+ G G S A
Sbjct: 250 GCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRA 309
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R + + M++++ +++++++LL +C G I+EA + M+ G +PDA Y ++
Sbjct: 310 RDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNC 369
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPN-------VFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
C+ + LD M + PN V T+N +I LC A+QL ++
Sbjct: 370 LCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVL 429
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
RG + ++N++L C++ ++ R++ M +P ++ ++
Sbjct: 430 TRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMV 479
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G PS + + L L K ++ FF V ++ I ++ + G +
Sbjct: 64 MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCENGNV 123
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S+ +L +M ++ + L+EA C+ G+ID+A M M +G + + Y+I
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIM 183
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ F + F + MK ++PN++TYN +I + C++ K+ A+++ DE+ +RG
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGV 243
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ +YN ++ C + +V+ A L+ RM + ++ P T+NM++ L G+ D+A
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
E ++ G P++ TY++++ G K G + M D GI P T +L N
Sbjct: 304 YLEKLKLIGLCPTLVTYNILISGF-SKVGNSSVVSELVREMEDRGISPSKVTYTILMNTF 362
Query: 301 V 301
V
Sbjct: 363 V 363
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G+ + Y +++ K+ + K + + K P + TY+ L+ G+
Sbjct: 168 MDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGK 227
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A K+FDE+ +R + + +N L+ +C+ G + +A G+L M+ P ++++
Sbjct: 228 LSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNM 287
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + L+ +K L P + TYN +I K +L+ EM +RG
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG 347
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P + +Y ++ ++ A + M + ++PD+HTY +++ L G A+
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++++SM + P+ Y+ M++G CK+ +A K+ E MV G+ P Y ST+++
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSY-KALKFLEEMVKNGVTPNVASYISTIQI 466
Query: 296 L 296
L
Sbjct: 467 L 467
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+ + + L+ LC++ V A + K PT +T+++L+ GL + G+L +A
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKA 301
Query: 64 RKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+++ L CP ++ +N L+ K GN ++REM G P +Y+I ++
Sbjct: 302 LSYLEKLKLIGLCPT-LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
F ++DI + + MKR LVP+ TY +I LC + EA +L M+E P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ YN ++ +C AL+ + M K V P+ +Y +++L + G+ A +
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ M + G P S LC K G+
Sbjct: 481 KEMTEAGLKPPES--------LCSKVGQ 500
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y + L+ C+ + +A + FD +K TY+IL+ GL G++S+A
Sbjct: 207 GVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L + M N L++ +C G +D+A L +++ IG P +Y+I I
Sbjct: 267 EGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISG 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + + V ++ M+ + P+ TY ++ +++ +E+AY++ M G PD
Sbjct: 327 FSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPD 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +Y ++ C + + A +L M + ++ P+ YN ++ + +A + E
Sbjct: 387 QHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLE 446
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K G P+V++Y + LC K GK EA + + M + G+ P
Sbjct: 447 EMVKNGVTPNVASYISTIQILC-KDGKSIEAKRLLKEMTEAGLKP 490
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 136/277 (49%), Gaps = 2/277 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P+ +++ + L G L F E L R D+ + ++A C+ GN+ +
Sbjct: 70 SPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFGITIKAFCENGNVSKGFE 128
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L +M ++G P+ F Y+I I A C DI + M L N + Y +I
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++ ++L +M G P+ ++YN+++ +C ++++A ++ ++K V +
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++ L R G+ +A + E M++ P+ T+++++ GLC G+L++A Y E
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNT-GQLDKALSYLEK 307
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ G+ P T +L + +G ++ L +ME
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 6/308 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E GI P+++ + ++ C A + D + E P V T++ L+ G+
Sbjct: 106 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA KL DEML R D + +NS++ CK D+A M M A PD +++
Sbjct: 166 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 221
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C A + ++L + R LV N TYN +I C+ + + A L EMI G
Sbjct: 222 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 281
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + N +L C+ ++ AL L + + D YN+++ + + + D A
Sbjct: 282 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 341
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ S+ G P V TY+VM+ G C K + +A F M D G P +ST L
Sbjct: 342 DLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNGHEPDNSTYNTLIRG 400
Query: 300 LVGLGFLD 307
+ G +D
Sbjct: 401 CLKAGEID 408
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 6/318 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E IKP + ++ LCK H A F + P V TY+ ++ G G
Sbjct: 71 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A++L +M+ER+ D+L N+L+ A K G + EA + EM PD +Y+
Sbjct: 131 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ N + D M P+V T+N II C+ ++V+E QLL E+ RG
Sbjct: 191 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN ++ C+ +N A L M V PD T N++L + + A
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++ Y++++HG+CK K++EA F + G+ P T ++ +
Sbjct: 307 ELFEVIQMSKIDLDTVAYNIIIHGMCKGS-KVDEAWDLFCSLPIHGVEPDVQTYNVMISG 365
Query: 300 LVGLGFLDIIEILADKME 317
G + +L KM+
Sbjct: 366 FCGKSAISDANVLFHKMK 383
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 139/297 (46%), Gaps = 6/297 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G+ P + + L++ LC V A + V TY +V G+ +G+
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L +M E D++ ++++++ +CK G+ +A + EM G P+ F+Y+
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC R+L M + P+V T+N +I K K+ EA +L DEM+ R
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+++ C + A + M PD T+N ++ + R R D
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + +RG + +TY+ ++HG C+ L A F+ M+ G+ P + T +L
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVD-NLNAAQDLFQEMISHGVCPDTITCNIL 292
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF----TPTVKTYSILVRGLGDVGELS 61
I P + +++ CK H FD+AKH F +P V T++ ++ +
Sbjct: 181 IFPDTVTYNSMIYGFCK-------HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 233
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L E+ R + +N+L+ C+ N++ A + +EM S G PD + +I +
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ FCE + + + ++ + + YN II +CK KV+EA+ L + G
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD +YN +++ C ++ ++ A L +M PD TYN +++ ++ G D++ E+
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 413
Query: 242 WESMEKRGF 250
M GF
Sbjct: 414 ISEMRSNGF 422
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
M L P V T+N +I LC +V EA L+++M+ +G + D +Y I+ C +
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
AL L+++M + ++ PD Y+ ++ L + G A ++ M ++G P+V TY+
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 260 MVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
M+ G C G+ +A + M++ I P T L + V G L E L D+M
Sbjct: 121 MIDGFC-SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 176
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G P+ L+ K+ ++ A F K PT T I+++GL G
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E R LF++ + + + +N++++ K GNI+ A + REM +G P +Y+
Sbjct: 488 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 547
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N+I ++L+ MKR L ++ Y +I CK ++ A++LL+E+ G
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 607
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ + YN+++ + V A+ L +M E + D TY ++ L++ GR A+
Sbjct: 608 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS 667
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M +G P ++V+++GLC KG+ E A K E M + + P
Sbjct: 668 DIHTEMLSKGILPDDRAHTVLINGLC-NKGQFENARKILEDMNGKNMIP 715
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + I P+ L ++ LCK F+ F PT Y+ ++ G G
Sbjct: 463 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A ++ EM E + + SL++ CK NID A +L +M+ G + D +Y
Sbjct: 523 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 582
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ D+ S +L+ ++ L PN F YN +I VEEA L +M+ G
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y +++ + A + T M + ++PD + +++ L G+F+ A
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ E M + PSV Y+ ++ G K+G L+EA + + M+D G+ P + T ++L N
Sbjct: 703 KILEDMNGKNMIPSVLIYNTLIAGHF-KEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 38/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI+ S+Y L+ +L K + + A F++A V T++ L+ L G+++EA
Sbjct: 328 GIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEAC 387
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+DE++ + +++++N+++ C+ NI+ A + +EM G P+A +++I + +
Sbjct: 388 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 447
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ DI + F + MK N++P T II+ LCK + E L ++ + +G P
Sbjct: 448 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 507
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
YN I+ +N+A + M + + P TY ++ + D A ++
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 567
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKK----------------------------------GK 270
M+++G + Y ++ G CK++
Sbjct: 568 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627
Query: 271 LEEACKYFEMMVDEGIP----PYSSTVEML 296
+EEA ++ MV+EGIP Y+S ++ L
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 657
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 45/327 (13%)
Query: 12 DLDQ-----LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+LDQ +H LC + + A + + P T++ ++ G ++EA +
Sbjct: 190 ELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALR 249
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D+M+ +++ SL++ C GN+ A ++ E+ G P+ +YS+ I C
Sbjct: 250 LKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCC 309
Query: 126 EANDIHSVFRVLDSMKR-------YNL---------------------------VPNVFT 151
+ +I F MK Y+L + NVFT
Sbjct: 310 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFT 369
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N ++ LCK K+ EA L DE+I +G +P+ SYN I+ HC + +N A ++ M
Sbjct: 370 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 429
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
P+ T+ +++ + G + A ++ M+ P+ +T +++ GLC K G+
Sbjct: 430 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC-KAGRS 488
Query: 272 EEACKYFEMMVDEG-IP---PYSSTVE 294
E F V +G +P PY++ ++
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIID 515
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
V G P+ + ++ K ++ +A + + + TP+ TY+ L+ G +
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A KL ++M + +DI A+ +L++ CK ++ AH +L E+R G P+ F Y+
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I F N++ + M + ++ TY +I L K+ ++ A + EM+ +G
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 678
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ ++ ++ C++ + A +++ M +N++P YN ++ + G A
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + M RG P TY ++V+G K G
Sbjct: 739 LHDEMLDRGLVPDNITYDILVNGKFKGDGNF 769
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 15 QLLHALCKRKHVKV-AHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
+++ L RK A ++F+ K EF IL+ L + E A+ LFD+
Sbjct: 83 HVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQFA 142
Query: 72 ERK-----CPVDILAHNSLLEAM---CKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K C +D L + L + GNI EA + ++ G E D +YSIF+H
Sbjct: 143 SGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHL 202
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + +L M+ +P T+ +I K V EA +L D+M+ G + +
Sbjct: 203 LCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMN 262
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++ +C + + AL L+ +++ ++P++ TY++++ + G ++A E +
Sbjct: 263 LAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYS 322
Query: 244 SMEKRGFYPSVS----------------------------------TYSVMVHGLCKKKG 269
M+ +G SV T++ ++ LC K+G
Sbjct: 323 EMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLC-KEG 381
Query: 270 KLEEACKYFEMMVDEGIPP 288
K+ EAC ++ ++ +GI P
Sbjct: 382 KMNEACNLWDEVIAKGISP 400
>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 146/303 (48%), Gaps = 28/303 (9%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ Y L+ L++ CK +HV + K P V ++ L+ GL VG+ S+A
Sbjct: 115 GLSPNTYTLNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQA 174
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LFDE +ER +NSL+ +C EA +L EM S+ PD ++++ +
Sbjct: 175 VELFDETVER-------GYNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDT 227
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + VL +M ++ +V TYN ++ +V EA +L MI +G P+
Sbjct: 228 FCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPN 287
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+SYN ++ +C ++ A +L M + + P+ +YN ++G+ A E+ E
Sbjct: 288 VFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNE 345
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGK------------------LEEACKYFEMMVDEG 285
+M G P + TYS+++ G CK+ L+EA + F M ++G
Sbjct: 346 NMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSELFVQGLQRLLDEALETFRKMEEDG 405
Query: 286 IPP 288
PP
Sbjct: 406 CPP 408
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 44/265 (16%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI-DEAHGMLREMRSIGAEPDAFSYS 118
+ +A F+ ML RK I+ LL A+ K D + R M G P+ ++ +
Sbjct: 65 IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLN 124
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC+ + F VL + + L P+V + +I LCK K +A +L DE +ER
Sbjct: 125 ILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVER 184
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G YN+++ C+ ++ A ++ MT N+MPD T+N+++ + G+ A
Sbjct: 185 G-------YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 237
Query: 239 TEVWESMEK-----------------------------------RGFYPSVSTYSVMVHG 263
V ++M + +G P+V +Y+++++G
Sbjct: 238 QGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILING 297
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
CK + ++EA + F M+ +G+ P
Sbjct: 298 YCKAE-MIDEAKQLFNEMIHQGLTP 321
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 143/288 (49%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ K +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+E +L + M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEMI +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGYMP 414
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
++L L K K+ K+ F++ N + + ++ ++IL+ GE+ A+ +FD + +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW 165
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
+++ N+L+ K G+++E + M++ G +PD ++YS+ I+ C+ + +
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ D M LVPN T+ +I CKN +V+ A ++ +M+ + +PD +YN ++
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + ++ A LI M + + PD+ TY ++ + G + A E + M K
Sbjct: 286 LCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ GLC ++G+ +A K M+ G+ P T M+ N G + L
Sbjct: 346 DVAYTALISGLC-QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Query: 314 DKMER 318
+M+R
Sbjct: 405 KEMQR 409
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML++ + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ TY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 120/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G + + +M+ G P V TYSV+++GLCK+ K+++A F+
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKES-KMDDANVLFD 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D+G+ P T L + G +D+ +EI + +S S
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+E G S+Y + L H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 FLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E KL M D+ ++ L+ +CK +D A+ + EM G P+ +++
Sbjct: 193 LDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK + +A+ L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ +C KKG + + K + M +G P T +L N
Sbjct: 373 KMMREMLSVGLKPDTGTYTMIINEVC-KKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMN 430
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ F++ +M + P+V+TY+ +I LCK K++ A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G ++A ++ + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 SMKGLKPDKITYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 348
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ +S L+ + G L +A + + E K + +LE + K G
Sbjct: 72 IYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E G + ++I H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 132 EFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++E ++L M G PD ++Y+ ++ C ++++ A L M + ++P+ T+
Sbjct: 192 DLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFT 251
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + GR D A E+++ M + P + TY+ +++GLC KKG L +A + M
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLNQAHDLIDEMSM 310
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLD 334
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 153/319 (47%), Gaps = 5/319 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M EFG K D +++L L K ++V A + FD K + F P +K+Y+IL+ G G
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L ++ EM + D++A+ ++ A CKA +EA EM +P +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ ++ + K TYN ++ C ++++E+AY+ +DEM +G
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ IL + A + M+ E P TY +++++ R D A
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAI 424
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++W+ M+ +G P + +S ++ LC + KL+EAC+YF M+D GI P L+
Sbjct: 425 KIWDEMKGKGVLPGMHMFSSLITALCHE-NKLDEACEYFNEMLDVGIRPPGHMFSRLKQT 483
Query: 300 LVGLGFLDIIEILADKMER 318
L+ G D + L KM+R
Sbjct: 484 LLDEGRKDKVTDLVVKMDR 502
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM P+ +++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++A L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 313 LQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ + P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G +A ++ + M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 SMKGLQPDKITYTTLIDGCC-KEGDLDTAFEHRKRMIQENI 348
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK---------------------- 45
P+ LH+ C H HQ AK V
Sbjct: 10 PANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQR 69
Query: 46 ----TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ G + G L +A + + E K V +LE + K G
Sbjct: 70 SDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGF 129
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++E ++L M+ G PD ++Y+ ++ C +++ A +L M + ++P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVT 249
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQANDLIDEM 308
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 309 SMKGLQPDKITYTTLIDGCCKEGDLD 334
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 159/332 (47%), Gaps = 2/332 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MV G P++ + L+ LC+ + H+ +H TP ++ Y+ ++ G+ G
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A + M +++ +N++L+ +C A +EA +L EM D +++I
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ + V +L+ M + +P+V TY +I CK V+EA LL M G
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ SY +L C A LI+ M ++ +P+ T+N ++ + + G ++A
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ + M G P + +YS ++ GL K GK EEA + +M+++GI P + + +
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGL-GKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAM 331
L G D I + D ++ +T + L NA+
Sbjct: 538 LSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGE 59
M +G+KP++ + +L LC + + A E P T++ILV G
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +L ++MLE C D++ + +++ CK G +DEA +L+ M + G +P+ SY+I
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A ++ M + +PN T+N +I +CK VE+A +LL +M+ G
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD SY+ ++ + AL L+ M + + P+ Y+ + L R GR D+
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 548
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++++S++ + Y+ ++ LCK+ + + A +F MV G P ST +L
Sbjct: 549 QMFDSIQDATVRSDAALYNAVISSLCKRW-ETDRAIDFFAYMVSNGCMPNESTYTILIRG 607
Query: 300 LVGLGFL 306
L G +
Sbjct: 608 LASEGLV 614
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 2/281 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + +Y+ +++GL + +L EM+ CP ++ N+L+ +C+ G ++ H
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M G PD Y+ I C+ +L M Y L PNV YN +++ LC
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
E+ EEA LL EM + D+ ++N ++ + C V+ + L+ +M + +PD T
Sbjct: 331 AERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVIT 390
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y V+ + G D A + ++M G P+ +Y++++ GLC+ + + +A + M
Sbjct: 391 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAE-RWVDAQELISHM 449
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTS 321
+ +G P T L N + G ++ IE+L + S
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCS 490
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 131/319 (41%), Gaps = 37/319 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P+ Y ++ +LC R + A D T +++ G A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ + + C +D N ++ A+C+ G +DE +LR++ S G EPD SY+ +
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C A V ++ M R PNV T+N +I LC+N E+ ++ L +M E G PD
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--------- 235
Y I+ C +A +++RM + P+ YN VLK L R+
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 236 --------------------------DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
DR E+ E M + G P V TY+ +++G C K+G
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC-KEG 402
Query: 270 KLEEACKYFEMMVDEGIPP 288
++EA + M G P
Sbjct: 403 LVDEAVMLLKNMSACGCKP 421
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY +VR L G +++A + DEM R C + +LEA C+ G A
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L+ + + G D+ + ++ + A CE + +L + + P++ +YN +++ LC
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ ++ +L+ EM+ G P+ ++N ++AY C +++M + PD
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++ + + G + A ++ M G P+V Y+ ++ GLC + + EEA M
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE-RWEEAEDLLAEM 344
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKME 317
E P T +L + G +D +IE+L +E
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P + +++ CK V A N + P +Y+I+++GL
Sbjct: 379 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 438
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A++L M+++ C + + N+L+ MCK G +++A +L++M G PD SYS
Sbjct: 439 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYST 498
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A +L+ M + PN Y+ + L + + ++ Q+ D + +
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 558
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D YNA+++ C R E + A+ M MP+ TY ++++ L G A
Sbjct: 559 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 618
Query: 240 EVWESMEKR 248
++ + R
Sbjct: 619 DLLSELCSR 627
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 6/276 (2%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
L L+ +LC A + D A V Y+ ++ G G+++ AR+L +
Sbjct: 47 LSALIRSLCAAGRTADAARALDTAGD--AAGVVAYNAMIAGYCRAGQVAAARRLAAAV-- 102
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
P + + ++ ++C G I +A +L EM G + + A C S
Sbjct: 103 -PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
R L + + N ++ +C+ V+E +LL ++ G PD SYNA+L
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + L+ M + P+ T+N ++ L R G F++ E M + G P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ Y+ ++ G+C K G E A M G+ P
Sbjct: 282 DLRMYATIIDGIC-KDGHHEVANDILSRMPSYGLKP 316
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P+ + L++ +CK+ V+ A + + +P + +YS ++ GLG G+
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+ + + + ++S+ A+ + G D+ M ++ DA Y+
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M +PN TY +IR L V EA LL E+ R
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628
Query: 180 A 180
A
Sbjct: 629 A 629
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ G P+ L+ K+ ++ A F K PT T I+++GL G
Sbjct: 310 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 369
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E R LF++ + + + +N++++ K GNI+ A + REM +G P +Y+
Sbjct: 370 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 429
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N+I ++L+ MKR L ++ Y +I CK ++ A++LL+E+ G
Sbjct: 430 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 489
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ + YN+++ + V A+ L +M E + D TY ++ L++ GR A+
Sbjct: 490 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS 549
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M +G P ++V+++GLC KG+ E A K E M + + P
Sbjct: 550 DIHTEMLSKGILPDDRAHTVLINGLC-NKGQFENARKILEDMNGKNMIP 597
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + I P+ L ++ LCK F+ F PT Y+ ++ G G
Sbjct: 345 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A ++ EM E + + SL++ CK NID A +L +M+ G + D +Y
Sbjct: 405 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 464
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ D+ S +L+ ++ L PN F YN +I VEEA L +M+ G
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y +++ + A + T M + ++PD + +++ L G+F+ A
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 584
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ E M + PSV Y+ ++ G K+G L+EA + + M+D G+ P + T ++L N
Sbjct: 585 KILEDMNGKNMIPSVLIYNTLIAGHF-KEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 38/330 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI+ S+Y L+ +L K + + A F++A V T++ L+ L G+++EA
Sbjct: 210 GIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEAC 269
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L+DE++ + +++++N+++ C+ NI+ A + +EM G P+A +++I + +
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ DI + F + MK N++P T II+ LCK + E L ++ + +G P
Sbjct: 330 FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
YN I+ +N+A + M + + P TY ++ + D A ++
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 449
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKK----------------------------------GK 270
M+++G + Y ++ G CK++
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509
Query: 271 LEEACKYFEMMVDEGIP----PYSSTVEML 296
+EEA ++ MV+EGIP Y+S ++ L
Sbjct: 510 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 539
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 45/327 (13%)
Query: 12 DLDQ-----LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+LDQ +H LC + + A + + P T++ ++ G ++EA +
Sbjct: 72 ELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALR 131
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D+M+ +++ SL++ C GN+ A ++ E+ G P+ +YS+ I C
Sbjct: 132 LKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCC 191
Query: 126 EANDIHSVFRVLDSMKR-------YNL---------------------------VPNVFT 151
+ +I F MK Y+L + NVFT
Sbjct: 192 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFT 251
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N ++ LCK K+ EA L DE+I +G +P+ SYN I+ HC + +N A ++ M
Sbjct: 252 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 311
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
P+ T+ +++ + G + A ++ M+ P+ +T +++ GLC K G+
Sbjct: 312 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC-KAGRS 370
Query: 272 EEACKYFEMMVDEG-IP---PYSSTVE 294
E F V +G +P PY++ ++
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIID 397
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 1/272 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGEL 60
V G P+ + ++ K ++ +A + + + TP+ TY+ L+ G +
Sbjct: 381 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 440
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A KL ++M + +DI A+ +L++ CK ++ AH +L E+R G P+ F Y+
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I F N++ + M + ++ TY +I L K+ ++ A + EM+ +G
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 560
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ ++ ++ C++ + A +++ M +N++P YN ++ + G A
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ + M RG P TY ++V+G K G
Sbjct: 621 LHDEMLDRGLVPDNITYDILVNGKFKGDGNFS 652
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
TP+++ +IL+ + EAR+L ++ML D + +L A K GNI EA
Sbjct: 2 TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+ ++ G E D +YSIF+H C + +L M+ +P T+ +I
Sbjct: 62 HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K V EA +L D+M+ G + + +++ +C + + AL L+ +++ ++P++
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS------------------------- 255
TY++++ + G ++A E + M+ +G SV
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241
Query: 256 ---------TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
T++ ++ LC K+GK+ EAC ++ ++ +GI P
Sbjct: 242 LESGLANVFTFNTLLSWLC-KEGKMNEACNLWDEVIAKGISP 282
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 154/293 (52%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
+KP + + ++++LCK K + A + + +P V TY+ L+ G +G L EA
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +EM + ++ N L++A+ K G + EA +L M +PD F+Y+ I
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ +++ V SM + + P+V Y +I LCK + V+EA L +EM + PD
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN+++ C + A+ L RM ++ + PD ++Y ++L L + GR + A E+++
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ +G++ +V Y+V+++ LC K G +EA M D+G P + T +++
Sbjct: 432 RLLAKGYHLNVHAYTVLINRLC-KAGFFDEALDLKSKMEDKGCMPDAVTFDII 483
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ L+ L+ LC R +K A F D F +Y L+ GL GE
Sbjct: 122 GFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAV 181
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L ++ D++ +N+++ ++CK + +A + EM G PD +Y+ IH
Sbjct: 182 ARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHG 241
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC + F +L+ MK N+ PNV T+N +I L K K++EA LL M++ PD
Sbjct: 242 FCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPD 301
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+++ + EV A + M + V PD Y ++ L + D A ++E
Sbjct: 302 VFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFE 361
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTV 293
M+ + P + TY+ ++ GLCK LE A + M ++GI P YS T+
Sbjct: 362 EMKHKNMIPDIVTYNSLIDGLCKNH-HLERAIALCKRMKEQGIQPDVYSYTI 412
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 6/297 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + L L++ C + H+ +A F N K F P T + L++GL GE+ +A
Sbjct: 87 GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
D+++ + +D +++ +L+ +CK G +LR++ +PD Y+ I++
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINS 206
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + V M + P+V TY +I C ++EA+ LL+EM + NP+
Sbjct: 207 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N ++ ++ A L+ M K + PD TYN ++ V A V+
Sbjct: 267 VCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFY 326
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
SM +RG P V Y+ M++GLCK K ++EA FE M + + P Y+S ++ L
Sbjct: 327 SMAQRGVTPDVQCYTNMINGLCKTK-MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 382
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + L+H C H+K A + K P V T++IL+ L G+
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ L M++ D+ +NSL++ + A + M G PD Y+
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ + + + MK N++P++ TYN +I LCKN +E A L M E+G
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +SY +L C + A + R+ + + H Y +++ L + G FD A
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++ ME +G P T+ +++ L +K ++A K M+ G+
Sbjct: 463 DLKSKMEDKGCMPDAVTFDIIIRALFEKDEN-DKAEKILREMIARGL 508
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+ ML + P N++L ++ + + ++ G PD + SI I+ FC
Sbjct: 45 FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
I F V ++ + PN T N +I+ LC ++++A D+++ +G D+ S
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y ++ C E RL+ ++ +V PD YN ++ L + A +V+ M
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G P V TY+ ++HG C G L+EA M + I P T +L + L G +
Sbjct: 225 VKGISPDVVTYTTLIHGFC-IMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKM 283
Query: 307 DIIEILADKMERS 319
+IL M ++
Sbjct: 284 KEAKILLAVMMKA 296
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ IKP ++ + L+ VK A + F+ A+ TP V+ Y+ ++ GL
Sbjct: 293 MMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+EM + DI+ +NSL++ +CK +++ A + + M+ G +PD +SY+I
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ C++ D +F+ L + K Y+L NV Y +I +LCK +EA L +M
Sbjct: 413 LLDGLCKSGRLEDAKEIFQRLLA-KGYHL--NVHAYTVLINRLCKAGFFDEALDLKSKME 469
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
++G PD +++ I+ ++ E + A +++ M ++
Sbjct: 470 DKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
LF + D+ + L+ C +I A + + G P+A + + I C
Sbjct: 79 LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLC 138
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+I D + + +Y +I LCK + + +LL ++ PD
Sbjct: 139 FRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 198
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
YN I+ C + A + + M + + PD TY ++ +G A + M
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+ + P+V T+++++ L K+GK++EA +M+ I P Y+S ++
Sbjct: 259 KLKNINPNVCTFNILIDAL-SKEGKMKEAKILLAVMMKACIKPDVFTYNSLID 310
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSE 62
FG++P++ + L+ C ++ A F + + +P ++TY L+ G G L
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++++ML C +++ + +++EA+C+ EA ++ M P +++ FI
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 123 AFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+A + +V M +++ PN+ TYN ++ L K ++EEAY L E+ RG
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+YN +L C+ +AL+L+ +M + PD T NM++ + G+ +RA ++
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 242 WE--SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ S +R + P V +Y+ ++ GLC+ + E+ E M+ GI P +T +L N
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCR-EDGVILLERMISAGIVPSIATWSVLINC 644
Query: 300 LV 301
+
Sbjct: 645 FI 646
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 154/357 (43%), Gaps = 43/357 (12%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
EFG PS+ + +L L +++ + + + K + F P V TY++L++ L ++
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A+KL EM + C D +++ +++ +MC+ G + E + EP Y+ I
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALI 253
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ +D F ++ M + PNV +Y+ +I LC + ++E A+ L +M++RG +
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 182 P----------------------DEW--------------SYNAILAYHCDRAEVNMALR 205
P D W +YN ++ C + A+
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ + M + P+ TY ++ + G D A +W M G P+V Y+ MV LC
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
+ K +EA E+M E P T L G LD E + +ME+ C
Sbjct: 434 RHS-KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE GI P++ L++ LC +++A F K P + T S LV+G G
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A L+++M+ +++A+N+L++ C GNI +A + M IG P+ +Y
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ F + + + + M PNV Y ++ LC++ K +EA L++ M +
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-VMPDRHTYNMVLKLLVRVGRFDR 237
P ++NA + CD ++ A ++ +M +++ P+ TYN +L L + R +
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A + + RG S STY+ ++HG C G A + M+ +G P T+ M+
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSC-NAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 12/275 (4%)
Query: 26 VKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK--CPVDILA 81
V +A FF + + F T T+ +++R L G++ + L +M + C D+
Sbjct: 56 VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI 115
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK 141
S++ + G + A M ++ G +P Y+ + N I ++ V MK
Sbjct: 116 --SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
R PNVFTYN +++ LCKN KV+ A +LL EM +G PD SY +++ C+ V
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
L R P YN ++ L + + A E+ M ++G P+V +YS ++
Sbjct: 234 EGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ LC G++E A + M+ G P T+ L
Sbjct: 289 NVLC-NSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 4/234 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ ++ ALC+ K A + +K P+V T++ ++GL D G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A K+F +M ++ +CP +I+ +N LL+ + KA I+EA+G+ RE+ G E + +Y+
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-- 176
+H C A +++ M P+ T N II CK K E A Q+LD +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
R PD SY ++ C + L+ RM ++P T+++++ +
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+I + L+ CK+ V+ A++ F K + F PT++T+ LV G +G
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM +R V++ +N++++A K G +A L+EM EPD +Y+ I+
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC ++ ++L+ R L PN TY ++ CK + +A L EM G D
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY A++ EV+ AL + RM ++PD + YN+++ L + G+ A +
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M + P Y+ +V G + G L+EA K F++++++G+ P ++
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFI-RHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS 536
Query: 304 GFLDIIEILADKMERS 319
G +D + DKM R+
Sbjct: 537 GMMDNAILCIDKMRRA 552
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P+ L+H CK+ ++ K + + + +Y L+ GL GE+ A
Sbjct: 378 GLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTA 437
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ D M+ R D +N L+ + K G + A ML EM PDAF Y+ +
Sbjct: 438 LTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDG 497
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F ++ ++ + L P V YN +I+ K+ ++ A +D+M PD
Sbjct: 498 FIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPD 557
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++++ I+ + + +N L++ M K+N P+ TY ++ R G A +++
Sbjct: 558 IFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFS 617
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M G PSV TYS+++ CK+ KL +A YFE+M+ P + L N
Sbjct: 618 MMRSHGLKPSVVTYSILIGSFCKE-AKLGKAVSYFELMLINKCTPNDAAFHYLVN 671
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 1/270 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M G++ + L+H L V A D + P Y++L+ GL G+
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A+ + EML++ D + +L++ + GN+DEA + + + G +P Y++
Sbjct: 469 LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F ++ + + +D M+R + VP++FT++ II K + ++ M+++
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ +C + E MA +L + M + P TY++++ + + +A
Sbjct: 589 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 648
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
+E M P+ + + +V+G K
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKA 678
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + TY+ L+ GE+ EA KL ++ + R + L + L+ CK G +A
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM + G E D SY IH A ++ + + D M ++P+ YN ++ L K
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFK 465
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K+ A +L EM+++ PD + Y ++ ++ A +L + ++ + P
Sbjct: 466 KGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVG 525
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN+++K + G D A + M + P + T+S ++ G K+ + K F +M
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQH-NMNAVLKIFGLM 584
Query: 282 VDEGIPPYSSTVEMLRN 298
V + P T L N
Sbjct: 585 VKQNCKPNVVTYTSLIN 601
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 145/374 (38%), Gaps = 109/374 (29%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
PS Y + LL+ L K + ++ AHQ L+
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQ----------------------------------LY 192
Query: 68 DEMLERK---------------------------------------CPVDILAHNSLLEA 88
DEM++R C +I+ +N+L++
Sbjct: 193 DEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDG 252
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK------- 141
CK G ++ A+ + ++++ G P ++ ++ FC+ ++ +L MK
Sbjct: 253 YCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVN 312
Query: 142 ----------RYNLV------------------PNVFTYNCIIRKLCKNEKVEEAYQLLD 173
RY L P++ TYN +I C +VEEA +LL+
Sbjct: 313 VQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLE 372
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ I RG P++ +Y ++ +C + E A + M+ + D +Y ++ LV G
Sbjct: 373 QTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAG 432
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
D A + + M RG P + Y+V+++GL KKGKL A M+D+ I P +
Sbjct: 433 EVDTALTIRDRMMNRGILPDANIYNVLMNGLF-KKGKLSMAKVMLTEMLDQNIAPDAFVY 491
Query: 294 EMLRNRLVGLGFLD 307
L + + G LD
Sbjct: 492 ATLVDGFIRHGNLD 505
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 137/352 (38%), Gaps = 66/352 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + L++ L K+ + +A + P Y+ LV G G
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+KLF ++E+ ++ +N +++ K+G +D A + +MR PD F++S
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFST 563
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + +++++V ++ M + N PNV TY +I C+ + + A +L M G
Sbjct: 564 IIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG 623
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALR---------------------------------- 205
P +Y+ ++ C A++ A+
Sbjct: 624 LKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSR 683
Query: 206 ---------------LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+RM + YN +L L + A ++ M G
Sbjct: 684 EPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGL 743
Query: 251 YPSVSTYSVMVHGLCKK---------------KGKLEEACKYFEMMVDEGIP 287
++ ++HG+C + +G+L+ A KY + +D+ IP
Sbjct: 744 CSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKY-SLELDKFIP 794
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEM--LERKCPVDILAHNSLLEAMCKAGNID 96
E PT + S ++ DVG + +A +++ + L P A NSLL + K I+
Sbjct: 128 ETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLP-STYACNSLLNLLVKHRRIE 186
Query: 97 EAHGMLREM--RSIGAE--PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
AH + EM R G + D ++ SI + C I ++++S VPN+ Y
Sbjct: 187 TAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFY 246
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
N +I CK +VE AY+L ++ +G P ++ +++ C L+ M
Sbjct: 247 NTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKD 306
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ + YN ++ ++G +A + + M + P + TY+ +++ C +G++E
Sbjct: 307 RGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFC-SRGEVE 365
Query: 273 EACKYFEMMVDEGIPP 288
EA K E + G+ P
Sbjct: 366 EAEKLLEQTIRRGLAP 381
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 116/303 (38%), Gaps = 50/303 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
++E G+ P + + ++ K + A D + P + T+S ++ G
Sbjct: 514 IIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ K+F M+++ C +++ + SL+ C+ G A + MRS G +P +YSI
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSI 633
Query: 120 FIHAFC--------------------------------------------EANDIHSVFR 135
I +FC E N++H R
Sbjct: 634 LIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSR 693
Query: 136 VLDSMKRYNLVPNVFT-----YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
+ ++ + +T YNCI+ LC+ V+ A QL ++M+ G D S+ A+
Sbjct: 694 SMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVAL 753
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ C +I+ E + Y++ L + G A+ + ++M K
Sbjct: 754 IHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYV 813
Query: 251 YPS 253
P+
Sbjct: 814 SPN 816
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 155/297 (52%), Gaps = 7/297 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
EFG++ + LL LC+ KHV+ A F N+ K +K +++++ G +G
Sbjct: 165 EFGLELNSEAFRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSH 224
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA++++ +++ C DI + + ++A+ K G + A + R M G +PD + I
Sbjct: 225 EAKRVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCII 284
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A C I + M PNV TYN +I+ +CK +++++ Y+L+DEM + +
Sbjct: 285 DALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGS 344
Query: 182 --PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +L + EV R++ RM + + YNMVL+L ++ D
Sbjct: 345 CLPNAVTYCYLLKSLKEPGEV---CRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVR 401
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ WE ME+ G+ P +Y++M+H +KG++++A +Y E M+ +G+ P T +++
Sbjct: 402 KTWEEMERNGWGPDRRSYTIMIHENF-EKGRVKDAVRYLEEMISKGMVPERRTEKLV 457
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARK 65
KP I+ + AL K+ + A + F + P V + ++ L + EA +
Sbjct: 239 KPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALE 298
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGA-EPDAFSYSIFIHA 123
+F +M ER C ++ +NSL++ MCK + + + ++ EM R G+ P+A +Y + +
Sbjct: 299 IFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKS 358
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
E + V RVL+ M+R N YN ++R K + + + +EM G PD
Sbjct: 359 LKEPGE---VCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPD 415
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV-GRFDRATEV 241
SY ++ + ++ V A+R + M + ++P+R T +V + +R+ GR ++ +V
Sbjct: 416 RRSYTIMIHENFEKGRVKDAVRYLEEMISKGMVPERRTEKLVSSMNIRLKGRSEKQEDV 474
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M E G +P++ + L+ +CK + +K ++ D K P TY L++ L +
Sbjct: 303 MSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEP 362
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GE+ ++ + M C ++ +N +L K + D EM G PD SY
Sbjct: 363 GEVC---RVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRSY 419
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVP 147
+I IH E + R L+ M +VP
Sbjct: 420 TIMIHENFEKGRVKDAVRYLEEMISKGMVP 449
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 151/299 (50%), Gaps = 6/299 (2%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEAR 64
I P+ + ++ L ++ + A +FD+ K + + Y+I++ G +G + EA
Sbjct: 468 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ + +++E+ I+ NSL+ CK G + EA +L ++ G P + +Y+ ++ +
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
CE D+HS+F +L M+ + P TY +++ LCK ++ E+ QLL M RG PD+
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 647
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ C ++ A +L +M + ++ P TYN+++ L G A + +
Sbjct: 648 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 707
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEMLRNR 299
++ + + Y+ ++ C KG ++ A +F MV+ G I YS+ + L R
Sbjct: 708 LQDQSIRLTKVAYTTIIKAHC-AKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKR 765
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%), Gaps = 10/299 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+++G+ P +Y + LLH LC ++ A +F D H P + TY+IL G +G
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A K+ ML D++ + L+ C+ GNI+E+ + +M S G + +Y++
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + C++ I +L M+ L P++ TY+ VEEA +L +EM +
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKR 467
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + +AI++ ++ ++ A +TK +V + YN+++ ++G A
Sbjct: 468 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ + ++G P++ T++ +++G C KKGKL EA K + + G+ P S T L N
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFC-KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 37/289 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
++E GI P+I + L++ CK+ + A + D K H PT TY+ L+ G + G+
Sbjct: 533 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 592
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + EM + + + +++ +CK G + E+ +L+ M + G PD +Y+
Sbjct: 593 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 652
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +FC+A+D+ F++ + M +++L P+ TYN +I LC +++A +LL + ++
Sbjct: 653 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 712
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y I+ HC + +V AL +M
Sbjct: 713 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMV---------------------------- 744
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+RGF S+ YS +++ LCK+ + +A +F MM+ GIPP
Sbjct: 745 -------ERGFEVSIRDYSAVINRLCKRN-LITDAKFFFCMMLTHGIPP 785
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+++E+ P + + L++ +C+ + +A LRE P S++ + FC
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + M +Y L+P+V++YN ++ LC +EEA + ++M G PD
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN + ++ A +++ RM + PD TY +++ ++G + + ++ E M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+G S+ TY+V++ LC K G+++EA M G+ P
Sbjct: 402 LSQGLKLSIVTYTVLLSSLC-KSGRIDEAVILLHEMEVIGLKP 443
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 77 VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRV 136
V I +NSLL + + D + E+++ G + ++ I I C + +
Sbjct: 201 VSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF 257
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
L P+V ++N ++ CK V+ A MI+ G PD +SYN +L C
Sbjct: 258 LRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCV 317
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ AL M V PD TYN++ +G A +V + M G P + T
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
Y++++ G C + G +EE+ K E M+ +G+ T +L + L G +D IL +M
Sbjct: 378 YTILICGHC-QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM 436
Query: 317 E 317
E
Sbjct: 437 E 437
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 11 YDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFD 68
+ +DQ+L +L + + A FD ++E F + ++ I+ + G+ E R++ +
Sbjct: 81 HQVDQILLSL-RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLN 139
Query: 69 EMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAN 128
+M+E + + SL E +C + + + ++ +M + A+ A
Sbjct: 140 QMVEEEGSG---SAPSLCELLCNSFRDWDLNNVVWDMLAC--------------AYSRAE 182
Query: 129 DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYN 188
+H VL MK NL ++ TYN ++ L + + + Y +E+ G +E++
Sbjct: 183 MVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVY---NEIKASGVPQNEYTNP 239
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ C ++ + A+ + E P ++N ++ ++G D A + M K
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN--RLVGL 303
G P V +Y++++HGLC G +EEA ++ M + G+ P T +L N R++GL
Sbjct: 300 GLLPDVYSYNILLHGLC-VAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 143/281 (50%), Gaps = 3/281 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
+KP + ++ CK ++ A FD + P + TY+ ++ G G + A K
Sbjct: 249 VKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCK--PNLVTYNTMINGFCKKGLMESAMK 306
Query: 66 LFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ D+M E + C D + + +L++ CK G ++EA + EM S EP+ +Y+ I+
Sbjct: 307 IVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGL 366
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ R++ M+ L NV T+ I++ LC K+++A + L EM+ G D
Sbjct: 367 CLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADA 426
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ +C + + A+ L+ M + P ++N V ++LV G+ D+A +
Sbjct: 427 KAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQ 486
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
M++ G P+ +YS ++ GLCK KG++ E ++ + M G
Sbjct: 487 MKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNG 527
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 4/286 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGEL 60
E G KP++ + +++ CK+ ++ A + D + P TY+ L+ G GEL
Sbjct: 278 EMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGEL 337
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA K +EM+ R C ++L +N+++ +C GN+DEA M+ MR G + + +++
Sbjct: 338 EEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSI 397
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ C + R L M + + Y ++ + CK K ++A LL EM RG
Sbjct: 398 LKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGI 457
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV-GRFDRAT 239
NP S+NA+ + + + A ++ +M + P+ +Y+ V+ L + GR
Sbjct: 458 NPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVE 517
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
E + M + G + S YS +V G C + G + A + F M+D G
Sbjct: 518 EFVDDMCRNGHHLDASMYSWLVKGYC-EDGNADMAMRLFCEMLDMG 562
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 6/176 (3%)
Query: 115 FSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
F+ + F+ A+ + DI K+ +F+YN I+ K ++ A + D+
Sbjct: 183 FAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQ 242
Query: 175 MIERGA-NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+++ G PD +Y I+ +C + A + M P+ TYN ++ + G
Sbjct: 243 IVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKG 299
Query: 234 RFDRATEVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ A ++ + M E P TY+ ++ G CK+ G+LEEA KY E MV P
Sbjct: 300 LMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKR-GELEEAMKYMEEMVSRNCEP 354
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 3/161 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDV-GELSE 62
GI PS+ + + L + A K TP +YS ++ GL G + E
Sbjct: 456 GINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHE 515
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+ D+M +D ++ L++ C+ GN D A + EM +G + S+ F+
Sbjct: 516 VEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVK 575
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK-LCKN 162
V + + M R ++ Y I+ + LCKN
Sbjct: 576 GLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCKN 616
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGE 59
M + G++P++ L L++ LC + +V A D+ + + P V TY +L+ GL G+
Sbjct: 138 MFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGD 197
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A +M ER +++ ++++++ +CK G + EA + EM G P+ +Y+
Sbjct: 198 TLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYAC 257
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +LD M + + P++ N ++ CK KV +A ++ MI G
Sbjct: 258 LIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN+++ +C + ++N A+R+ M +PD + ++ + ++A
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAM 377
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ E M K GF P V+T++ ++ G C + G+ A + F M G P T ++ +
Sbjct: 378 HLLEEMSKMGFVPDVATWTTLIGGFC-QAGRPLAAKELFLNMHKYGQVPNLQTCAVILDG 436
Query: 300 LVGLGFLDIIEILADKMERS 319
L L LA ME+S
Sbjct: 437 LCKENLLSEAVSLAKAMEKS 456
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 2/295 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
GI+ L+ +++ LC+ K V K PTV T + L+ GL G ++
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVA 164
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A L D M + P+D+ + L+ +CK G+ A G LR+M +P+ YS +
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + + M + PN+ TY C+I+ LC + +EA LLDEM++ G
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD N ++ C +V A +I M PD TYN ++ + + + A V
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ M RG P + ++ ++HG CK K + +A E M G P +T L
Sbjct: 345 FHLMVSRGRLPDIVVFTSLIHGWCKDK-NINKAMHLLEEMSKMGFVPDVATWTTL 398
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 4/302 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF--FDNAKHEFTPTVKTYSILVRGLGDVG 58
M++ G++P + L+ L+ A CK V A F E P V TY+ L+
Sbjct: 278 MMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGE-GPDVFTYNSLIHIYCLQN 336
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+++EA ++F M+ R DI+ SL+ CK NI++A +L EM +G PD +++
Sbjct: 337 KMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWT 396
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+A + + +M +Y VPN+ T I+ LCK + EA L M +
Sbjct: 397 TLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKS 456
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+ + Y+ +L C ++N A L + + + + + + Y +++K L + G D+A
Sbjct: 457 NLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKA 516
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ +ME+ G P+ TY+V V GL KK ++ + KY +M D+G ++T E + N
Sbjct: 517 EDLLINMEENGCLPNNCTYNVFVQGLLTKK-EIARSIKYLTIMRDKGFSVDAATTEFIIN 575
Query: 299 RL 300
L
Sbjct: 576 YL 577
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E KP++ ++ LCK V A + P + TY+ L++GL + G
Sbjct: 208 MEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGR 267
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L DEM++ D+ N L++A CK G + +A ++ M G PD F+Y+
Sbjct: 268 WKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNS 327
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH +C N ++ RV M +P++ + +I CK++ + +A LL+EM + G
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMG 387
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ ++ C A L M K +P+ T ++L L + A
Sbjct: 388 FVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAV 447
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ ++MEK ++ YS+++ G+C GKL A + F + +G+ ++
Sbjct: 448 SLAKAMEKSNLDLNIVIYSILLDGMC-SAGKLNAAWELFSSLPGKGLQINVYIYTIMIKG 506
Query: 300 LVGLGFLDIIEILADKMERS 319
L G LD E L ME +
Sbjct: 507 LCKQGSLDKAEDLLINMEEN 526
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 2/235 (0%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPD 113
G + + EA LF M K + LL A+ + + A +++ M S+G E D
Sbjct: 52 GKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEAD 111
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
+ +I I+ C + F VL +M + L P V T +I LC V +A L D
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
M + D ++Y ++ C + A+ + +M + N P+ Y+ ++ L + G
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDG 231
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A + M +G P++ TY+ ++ GLC G+ +EA + M+ G+ P
Sbjct: 232 LVSEALNLCSEMNGKGVRPNLVTYACLIQGLC-NFGRWKEAGSLLDEMMKMGMRP 285
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 5/260 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
KP+ L+ ALC+ + K + A+ + P V TY++++ L +S A +
Sbjct: 32 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
F+ M E D++ +N+LL +CK G + +A + M G P +Y+ I FC
Sbjct: 92 FFETMPEP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 147
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ + + +L M P V++Y II LCKN KV++AYQL +EM G PD
Sbjct: 148 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ C + ++ A L+T M + PD+ T+ +++ L R A +++ M
Sbjct: 208 TYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 267
Query: 246 EKRGFYPSVSTYSVMVHGLC 265
K+G P + T++V+V LC
Sbjct: 268 AKQGCAPDLVTHTVLVSKLC 287
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P + + LL LCK V A F + + TP+ TY+ L+ + + A
Sbjct: 98 EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L M RKC + ++ S++ +CK +D+A+ + EM+ G +PD +Y+ IH C
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+H +L M P+ T+ +I LC ++++EA+ L M ++G PD
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277
Query: 186 SYNAILAYHCDRAEVNMALRLITR--MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ +++ C ++ AL ++ E V+ Y + + L R FDRA + +
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRNYPACPEAVI----LYTPIFRELGRRRGFDRAARLLQ 333
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG P+V TY+ GL K + A + F M+++GI P +L +
Sbjct: 334 KMARRGVPPNVVTYTAFFKGLGDWKEGM-RAYREFRRMLEQGIEPDMVAYNVLVDGFCKA 392
Query: 304 GFLDIIEILADKMERS 319
LD+ E + M++S
Sbjct: 393 DRLDMAEKMVRYMDQS 408
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+F + + C + L++ L++A+C+ G ID+A + EM PD F+Y++ I C
Sbjct: 22 VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 81
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A I ++M P+V TYN ++ LCKN +V +A L M G P +
Sbjct: 82 KARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 137
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++ C + A L+ M P ++Y ++ L + + D+A +++E M
Sbjct: 138 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 197
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ G P TY+ ++HGLC K+ +L EA +MV+ G P T L
Sbjct: 198 KLAGCKPDRVTYNTLIHGLCVKQ-RLHEAKDLLTVMVENGFQPDKITFTAL 247
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 35/312 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++Y +++ LCK + V A+Q F+ K P TY+ L+ GL L EA+ L
Sbjct: 169 PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDL 228
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC- 125
M+E D + +L+E +C I EA + + M G PD ++++ + C
Sbjct: 229 LTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCI 288
Query: 126 ------------------EANDIHS-VFR-------------VLDSMKRYNLVPNVFTYN 153
EA +++ +FR +L M R + PNV TY
Sbjct: 289 LRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYT 348
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+ L ++ AY+ M+E+G PD +YN ++ C ++MA +++ M +
Sbjct: 349 AFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQS 408
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
+ P+ TYN ++ R G+ + E+ +M RG P V+T+S +V GL G+ +
Sbjct: 409 GLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL-FMVGQADA 467
Query: 274 ACKYFEMMVDEG 285
A + + + +G
Sbjct: 468 AYSFLNLAMSQG 479
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+LL+ + +A ++ + R + S +P+A SY + A C I + M R
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
LVP+VFTYN +I LCK ++ A + + M E PD +YN +L C V
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ 119
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L M + P TY ++ + ++ +F+ A + + M R P+V +Y +++
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
GLCK + K+++A + FE M G P T L
Sbjct: 180 GLCKNR-KVDQAYQLFEEMKLAGCKPDRVTYNTL 212
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+ LC +K A F AK P + T+++LV L + +
Sbjct: 232 MVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRK 291
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + CP ++ + + + + D A +L++M G P+ +Y+
Sbjct: 292 LRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTA 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
F + + +R M + P++ YN ++ CK ++++ A +++ M + G
Sbjct: 350 FFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSG 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P+ +YN ++ +HC + +V L+ M PD T++ ++ L VG+ D A
Sbjct: 410 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
T N ++ L + + E+ + + + P+ SY ++ C +++ A I M
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+E ++PD TYN+V+ L + R RA E +E+M + P V TY+ ++ GLC K G+
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLC-KNGR 116
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEML 296
+ +AC F M GI P T L
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTL 142
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 157/314 (50%), Gaps = 3/314 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P++ L+ A+CK V+ A + F D P + TY+ ++ GLG G + +A L
Sbjct: 157 PNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFL 216
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F+EM + +NSL+ + ++G D A + REM S G +PD +++ ++
Sbjct: 217 FEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGV 276
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
A R+ + +V YN +I LCK+++++EA+++ E+ E G PD ++
Sbjct: 277 AGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYT 336
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+NA++ C ++ A L+ M + PD YN ++ L + GR + A ++ M+
Sbjct: 337 FNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQ 396
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
G+ P V TY+ ++ C K G++E+A + FE + +G + T + N L G +
Sbjct: 397 SLGYEPDVVTYNTLIDESC-KGGRIEDALRLFEEISAKGFAN-TVTYNTILNGLCMAGRV 454
Query: 307 DIIEILADKMERST 320
D L + M++ T
Sbjct: 455 DEAYKLFNGMKQET 468
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L RG G L ++ + M +C + A+NSL++A KAG +A + R M G
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
PD +++++ ++AF +A + SV+++ + M+ N PNV TY+ +I +CK VE+A
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++ +M RG P+ ++Y +++ V+ A L MT E ++ R YN ++ L
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
R GR D A +++ M +G P T++ +V+GL G+ EA + F+ D G
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL-GVAGRASEARRIFQEARDVG 294
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 2/286 (0%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
H T Y+ L+ G +A ++ M + D N L+ A KA +D
Sbjct: 83 HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDS 142
Query: 98 AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
+ EM++ P+ +YSI I A C+ + +V MK PN+FTY +I
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202
Query: 158 KLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
L K+ V++A+ L +EM G YN+++ + A +L M + + P
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQP 262
Query: 218 DRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKY 277
D T+ ++ L GR A +++ G V+ Y+V++ LCK K +L+EA +
Sbjct: 263 DHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSK-RLDEAWEI 321
Query: 278 FEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
F + ++G+ P T L + L G + IL M+R+ CT
Sbjct: 322 FGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA-GCT 366
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 6/279 (2%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+A++FF + + P+V+ + LV LG +EA ++ E+ + + + L
Sbjct: 1 MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIEL 60
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
AG ++++ L+ M A +Y+ I AF +A V M + L
Sbjct: 61 ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGL 120
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+ +T+N ++ K ++V+ ++L +EM + +P+ +Y+ ++ C V AL+
Sbjct: 121 RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALK 180
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ M P+ TY ++ L + G D+A ++E M G + Y+ ++HGL
Sbjct: 181 VFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL- 239
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ G+ + A K F M+ +G+ P T L + GLG
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSL---VYGLG 275
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G +P + + L+ CK ++ A + F+ + TY+ ++ GL G +
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRV 454
Query: 61 SEARKLFD----EMLERKCPVDILAHNSLLEAMCKAG 93
EA KLF+ E ++ D + + +LL +AG
Sbjct: 455 DEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 148/322 (45%), Gaps = 37/322 (11%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELS 61
+ G+ P+++ + L+ LCK + A + F + A P TY+IL+ L G +
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A LFD+M ++ V + +NSL+ CK G++D A G+L M G P A SYS I
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 122 HAFCEANDIHSVF-----------------------------------RVLDSMKRYNLV 146
C D+ S R+ D M N++
Sbjct: 451 AGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRL 206
PN T+N +I C + +A+QL D+M+E G PD ++Y ++++ C + V+ A
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEF 570
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
+ + + + + +L L R GRF +W+ M RG + +++++V+ K
Sbjct: 571 VADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630
Query: 267 KKGKLEEACKYFEMMVDEGIPP 288
+ K E++C F M ++G+ P
Sbjct: 631 QHDK-EKSCVLFREMKEQGVKP 651
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 142/348 (40%), Gaps = 37/348 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSEA 63
GI + Y Q+L +L K + +A FD + Y+ +R + L A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R L M + +N L+ +CK + EA + M +IG D +Y ++
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277
Query: 124 FCEANDIHSVFRVLDSMKRYN-----------------------------------LVPN 148
FC ++ R+ M R +VPN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
VF YN +I KLCKNE+ ++A +L EM RG P+E +Y ++ C R + AL L
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M + + + YN ++ + G DRA + M K G P+ ++YS ++ GLC +
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-RN 456
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G L A + M + GI + T L N +D L DKM
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+ L++ C+ + +++A + D + F P+ S ++ L
Sbjct: 259 MVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA L ++ + ++ A+N+L++ +CK D+A + +EM G EP+ +Y+I
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA C+ I + D M+ + V+ YN +I CK ++ A LL M++ G
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P SY+ ++A C +++ A+ L M + + + +T+ ++ + + D A
Sbjct: 439 LTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 498
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M P+ T++VM+ G C G + +A + ++ MV+ G+ P + T L +
Sbjct: 499 RLFDKMIDSNVIPNEVTFNVMIEGYC-LVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 300 L 300
L
Sbjct: 558 L 558
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 147/336 (43%), Gaps = 42/336 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E GI + Y L++ CK K + A + FD P T+++++ G VG
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 528
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
+ +A +L+D+M+E D + SL+ +C + +A
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588
Query: 99 --HGMLREMRSI------------GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+G+ RE R G + D S++I ++A + +D + MK
Sbjct: 589 LLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQG 648
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+ Y C+I L K E + +A D+M+ G +P+ ++ ++ C + A
Sbjct: 649 VKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAE 708
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M NV+P++ TYN L G ++A ++ +M +G S+ ++++++ GL
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGL 767
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
C K GK++EA + + G P YS+ + L
Sbjct: 768 C-KAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 40/325 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M + GIK ++Y + L++ CK+ + A K TPT +YS L+ GL G+
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458
Query: 60 LS-----------------------------------EARKLFDEMLERKCPVDILAHNS 84
LS EA +LFD+M++ + + N
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++E C GNI +A + +M +G +PD ++Y I C + + + ++
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
V N F+ ++ L + + E Y L DEM RG D S+ I+ + + +
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M ++ V PD Y ++ L + +A W+ M G+ P+ T++V+++ L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNL 698
Query: 265 CKKK--GKLEEACKYFEMMVDEGIP 287
CK G E CK EM+ +P
Sbjct: 699 CKSGYLGSAELLCK--EMLAGNVLP 721
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+K + +++A K+ + + F K + P Y+ ++ L + +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+D+M+ + + H L+ +CK+G + A + +EM + P+ F+Y+ F+
Sbjct: 673 LNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDY 732
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F D+ + +M + +L ++ ++N +I+ LCK K++EA L+ ++ E G +PD
Sbjct: 733 FATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPD 791
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY+ I+ C ++N A L M + + PD YN+ ++ G D+A ++
Sbjct: 792 CISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYT 851
Query: 244 SMEKRGFYPSVSTYSVMVHGL 264
+M + G P+ TY ++ G+
Sbjct: 852 NMIRSGVQPNWDTYRALLSGI 872
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G P+ L++ LCK ++ A + P TY+ + G+
Sbjct: 679 MVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 738
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A+ L ML+ I++ N L++ +CKAG I EA ++R++ G PD SYS
Sbjct: 739 MEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYST 797
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ DI+ F + + M L P+V YN IR + + ++A + MI G
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857
Query: 180 ANPDEWSYNAILA 192
P+ +Y A+L+
Sbjct: 858 VQPNWDTYRALLS 870
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 152/291 (52%), Gaps = 5/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF--DNAKHEFTPTVKTYSILVRGLGDVG 58
M E G P + + ++ +LC + A +P V +Y++++ GL G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
E+S+A LF+EM+++ +++ +NS++ A+CKA +D+A +LR+M +PD +Y+
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IH + ++ M R L+P++ T+N ++ LCK+++ +EA ++ + +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 179 GANPDEWSYNAIL-AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD SY+ +L Y + V+M L MT ++ D H +N+++ + G D
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMN-NLFHSMTDNGIVADSHCFNILINAHAKRGMMDE 465
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A ++ M +G P+V TY+ ++ LC + G+L +A + M+ G+ P
Sbjct: 466 ALLIFTEMRGQGVSPNVVTYATVIAALC-RMGRLADAMEKLSQMISIGLKP 515
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 158/347 (45%), Gaps = 44/347 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVK----VAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
MV+ G+ P++ + ++HALCK + + V Q FDN+ P TY+ ++ G
Sbjct: 298 MVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS---IQPDEVTYTAMIHGYSC 354
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+G EA K+F EM DI+ NSL++++CK EA + + + G +PD S
Sbjct: 355 LGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIIS 414
Query: 117 YSIFIHAFCEAN---DIHSVFR-------VLDS-------------------------MK 141
YSI +H + D++++F V DS M+
Sbjct: 415 YSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMR 474
Query: 142 RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVN 201
+ PNV TY +I LC+ ++ +A + L +MI G P+ Y++++ C ++
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLI 534
Query: 202 MALRLITRMTKENV-MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A L++ M + + P+ ++ ++ L GR A +V+ + G P + T++ +
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSL 594
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ G C GK+++A + MV G P T L N G +D
Sbjct: 595 IDGYC-LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRID 640
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 15/319 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP--TVKTYSILVRGLGDVG 58
M+ G+KP+ L+ C + A + + P + +S ++ L + G
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEG 567
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A+ +F+ ++ DI NSL++ C G +D+A G+L M S G EPD +YS
Sbjct: 568 RVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYS 627
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ + ++ I + M + P TY+ ++ L + + A ++ EMIE
Sbjct: 628 TLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIES 687
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G +Y IL C + A+ L ++ N+ + N ++ L +V R + A
Sbjct: 688 GTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEA 747
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ S+ G P+ STY VM+ L K+G +EEA F M G P S
Sbjct: 748 HDLFASVSASGLVPNASTYGVMIINLL-KEGSVEEADIMFSSMEKTGCAPSS-------- 798
Query: 299 RLVGLGFLDIIEILADKME 317
RL+ DII +L K E
Sbjct: 799 RLLN----DIIRMLLQKGE 813
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGN-----------IDEAHGMLREMRSIGA 110
+A LFDE+L + PV A N L A+ +A + + + + RE
Sbjct: 101 DAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRV 160
Query: 111 EP-DAFSYSIFIHAFCEAN--DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEE 167
P +Y I + C A D+ F + R L + N ++ LC ++ +E
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAF--FARLLRAGLRTDGIVTNTFLKCLCYAKRTDE 218
Query: 168 AYQ-LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK-ENVMPDRHTYNMV 225
A LL M E G PD +SYN ++ C + AL ++ RMTK + PD +Y MV
Sbjct: 219 ALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMV 278
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L G +A ++ M ++G P+V TY+ +VH LCK + +++A M D
Sbjct: 279 IHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARA-MDKAELVLRQMFDNS 337
Query: 286 IPP 288
I P
Sbjct: 338 IQP 340
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 2/279 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
++ G +P I+ + L+ C + A D T P V TYS L+ G G
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + LF EML ++ + ++ +L+ + +AG A M EM G +Y+I
Sbjct: 639 IDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTI 698
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C N + + NL + N +I L K ++ EEA+ L + G
Sbjct: 699 ILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASG 758
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y ++ V A + + M K P N ++++L++ G +A
Sbjct: 759 LVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAG 818
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++ ST S+++ L KG+ E K+
Sbjct: 819 YYMSKVDGTIISLEASTTSLLI-SLFASKGRYREQIKFL 856
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 4/299 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
FG + + LL ALC+ K+VK A K F K+++I++ G +G L +
Sbjct: 144 FGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCVIGSLRDT 203
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ EM R D +++ S + K N+ + + +M+ + +PD Y+ IH+
Sbjct: 204 ERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHS 263
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + ++ +M+ ++ NV TYN +I+ LCK + +EA + +E+++RG P
Sbjct: 264 LAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPT 323
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+A L + E+ L+ +M P TY M+++ R + D + +W
Sbjct: 324 IQTYHAFLRFLRTEEEI---FELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWH 380
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M + G P S+Y V++HGL GKLE+A KY+ M ++ + P E+L+ L G
Sbjct: 381 EMSENGISPDRSSYIVLIHGLF-LNGKLEDAHKYYLEMKEKDLLPEPKIDEVLQTWLAG 438
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF-----SYSIFIHAFCEANDIHSVFRV 136
++S++ + K D A ++ EMR G P + + I I +C +D+
Sbjct: 80 YHSMISILGKMRKFDTAWALIDEMR--GGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINT 137
Query: 137 LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL------------------------ 172
+ KR+ + + ++ LC+ + V++A LL
Sbjct: 138 FYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCVI 197
Query: 173 ----------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
EM RG + D SY + ++ + ++ LRL M + + PDR Y
Sbjct: 198 GSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVY 257
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
N V+ L + A ++ ++ME++G +V TY+ ++ LCK + + +EA FE ++
Sbjct: 258 NAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKAR-RFDEARAVFEELL 316
Query: 283 DEGIPPYSST 292
G+ P T
Sbjct: 317 QRGLCPTIQT 326
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ PS+ + ++ A + AH+ + P+ T S ++ GL G
Sbjct: 479 MLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGR 538
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EAR L +M+++ PV+ +A LL+ K G+ AH + EM + G PDA ++S
Sbjct: 539 LQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSA 598
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FI +A + + M + VPN F YN +I LC K+ EA +L EM ++G
Sbjct: 599 FIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKG 658
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++ N I+ C + A M V PD TYN ++ +V A
Sbjct: 659 LLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSAD 718
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
E M G+ P ++TY++ + G C + K+ A + ++ G+ P + T + N
Sbjct: 719 EFLNKMYASGWDPDITTYNIRIQGFCSSQ-KISRAVTMLDELIAVGVVPNTVTYNTMMN 776
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ + LL K AH +++ P +S + GL G
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + F EM ++ + +NSL+ +C G + EA + REMR G PD F+ +I
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNI 668
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ + S F M + P+ TYN +I CK + A + L++M G
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +YN + C +++ A+ ++ + V+P+ TYN ++ V DRA
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA-VCTDMLDRAM 787
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ + K F P+V T +V++ C K+G E+A
Sbjct: 788 VLTAKLLKMAFVPNVVTTNVLLSHFC-KQGMPEKA 821
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G +P ++ + ++ C++ +++VA F K P V Y+IL+ G
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A M++ C ++ ++++ A C GN+ EA + ++ +G P+ Y+
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + +A D+ + + M+ + P+ T+N ++ K K ++Y+L +
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS 448
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD Y+ +A C +++ A++ + M ++ + P +N V+ R G D A
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAH 508
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ ++ M G PS ST S M+ GL KKG+L+EA M+D+G+P
Sbjct: 509 KAYKIMLMFGLVPSSSTCSSMLLGL-SKKGRLQEARDLLYKMIDKGLP 555
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 10/301 (3%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G+ P++ + L+ K + V A+ ++ + + P T++ILV G G+ +
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEA 435
Query: 62 EARKLF-DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++ +LF D L P D ++ + +C AG +DEA L +M G P +++
Sbjct: 436 DSYELFRDWSLSSLVP-DCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSV 494
Query: 121 IHAFCEA---NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I A+ A ++ H +++ M + LVP+ T + ++ L K +++EA LL +MI+
Sbjct: 495 IAAYSRAGFEDNAHKAYKI---MLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMID 551
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G ++ ++ +L + + A L M + PD ++ + L + G +
Sbjct: 552 KGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEE 611
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A E + M K+GF P+ Y+ ++HGLC GKL EA K M +G+ P T ++
Sbjct: 612 AYEAFSEMSKKGFVPNNFVYNSLIHGLC-NCGKLHEALKLEREMRQKGLLPDIFTTNIII 670
Query: 298 N 298
N
Sbjct: 671 N 671
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D + P Y + V GL G+L EA + ++MLE+ P ++A NS++ A +
Sbjct: 441 FRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSR 500
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
AG D AH + M G P + + S + + + +L M L N
Sbjct: 501 AGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVA 560
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ ++ K A+ L EM RG PD +++A + V A + M+
Sbjct: 561 FTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMS 620
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K+ +P+ YN ++ L G+ A ++ M ++G P + T +++++G C K+G++
Sbjct: 621 KKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFC-KEGRM 679
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
+ A F M G+ P + T N L+G G+ ++++++
Sbjct: 680 KSAFDAFAEMHHIGVTPDTVTY----NTLIG-GYCKVLDMVS 716
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 14/287 (4%)
Query: 12 DLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
D D +H+ C H+ A A+ S ++R +G S + L + M
Sbjct: 150 DSDATVHSCCIAAHILAAESLQLLAQ-------DVISWVIRRIGA----SRSAHLVEFMW 198
Query: 72 --ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
K D N+L+ + E+ +L MR +G P + + SI D
Sbjct: 199 ANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGD 258
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
SV+++L M R P +N +I C+ + A LL M + PD ++YN
Sbjct: 259 YGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNI 318
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ + R + AL + M K P T++ ++ G A +++E +++ G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P+V+ Y+ ++ G K + + +A +E M D+GI P +T +L
Sbjct: 379 LSPNVAMYNTLMSGYFKAR-DVCQANMLYEEMRDKGIAPDGATFNIL 424
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 116/286 (40%), Gaps = 36/286 (12%)
Query: 38 HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE 97
H++ + L+RG + E+ ++ M E A + L + + G+
Sbjct: 202 HKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGS 261
Query: 98 AHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN---- 153
+LR M G P +++I I FC+ + +L M ++ P+V+ YN
Sbjct: 262 VWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILIN 321
Query: 154 -------------------------------CIIRKLCKNEKVEEAYQLLDEMIERGANP 182
II C V EA ++ + + E G +P
Sbjct: 322 AYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSP 381
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ YN +++ + +V A L M + + PD T+N+++ + G+ + E++
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P S Y V V GLC G+L+EA ++ E M+++G+PP
Sbjct: 442 RDWSLSSLVPDCSLYDVSVAGLC-WAGQLDEAMQFLEDMLEKGMPP 486
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 147/294 (50%), Gaps = 5/294 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
FG++P++ + L+ C ++ K F + +P ++TY L+ G G L
Sbjct: 345 FGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEG 404
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A ++++ML C +++ + S++EA+C+ EA ++ M P +++ FI
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 464
Query: 123 AFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+A + +V M ++Y PN+ TYN ++ L K ++EEAY L E+ RG
Sbjct: 465 GLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 524
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+YN +L C+ +AL+L+ +M PD T NM++ + G+ +RA ++
Sbjct: 525 WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM 584
Query: 242 WE--SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ S +R + P V +Y+ ++ GLC+ + E+ FE M+ E I P +V
Sbjct: 585 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCR-EDGVILFERMISERIIPILRSV 637
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 153/357 (42%), Gaps = 43/357 (12%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
EFG PS+ + +L L +++ + + + K + F P V TY++L++ L ++
Sbjct: 138 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 197
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A+KL EM + C + +++ +++ +MC+ G + E + EP Y+ I
Sbjct: 198 GAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALI 252
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ C+ D ++ M + PNV +Y+ +I +L + ++E A+ LL +M++RG +
Sbjct: 253 NGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCH 312
Query: 182 P----------------------DEW--------------SYNAILAYHCDRAEVNMALR 205
P D W +YN ++ C ++ A+
Sbjct: 313 PNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVS 372
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
+ M + P+ TY ++ + G + A +W M G P+V Y+ MV LC
Sbjct: 373 VFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALC 432
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
+ K +EA E+M E P T L G LD E + +ME+ C
Sbjct: 433 RHS-KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRC 488
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 4/299 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE GI P++ L++ L +++A K P + T S LV+G G
Sbjct: 271 MVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGT 330
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A ++++M+ +++A+N+L++ C GNID+A + M IG P+ +Y
Sbjct: 331 TFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYG 390
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ F + + + + M PNV Y ++ LC++ K +EA L++ M +
Sbjct: 391 SLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKE 450
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDR 237
P ++NA + CD ++ A ++ +M ++ P+ TYN +L L + R +
Sbjct: 451 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEE 510
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A + + RG S STY+ ++HG C G A + M+ G P T+ M+
Sbjct: 511 AYGLTREIFMRGVEWSTSTYNTLLHGSC-NAGLPGIALQLVGKMMVNGKSPDEITMNMI 568
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P++ ++ ALC+ K A + +K P+V T++ ++GL D G
Sbjct: 412 MLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 471
Query: 60 LSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
L A K+F +M ++ +CP +I+ +N LL+ + KA I+EA+G+ RE+ G E +Y+
Sbjct: 472 LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN 531
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI-- 176
+H C A +++ M P+ T N II CK K E A Q+LD +
Sbjct: 532 TLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCG 591
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
R PD SY ++ C + L RM E ++P
Sbjct: 592 RRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 12/285 (4%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
+L L + V +A FF + + F T T+ +++R L G++ + L +M +
Sbjct: 45 VLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 104
Query: 74 K--CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
C D+ S++ + G + A M ++ G +P Y+ + N I
Sbjct: 105 GFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 162
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
++ V MKR PNVFTYN +++ LCKN KV+ A +LL EM +G P+ SY ++
Sbjct: 163 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVI 222
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+ C+ V +L R P YN ++ L + + E+ M ++G
Sbjct: 223 SSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMVEKGIS 277
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
P+V +YS +++ L G++E A M+ G P T+ L
Sbjct: 278 PNVISYSTLINEL-SNSGQIELAFSLLAQMLKRGCHPNIHTLSSL 321
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 149/294 (50%), Gaps = 4/294 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E P+ L+H LC+ ++ A D + P+ +TY++L++ L D G +
Sbjct: 259 EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A LFDEM+ R C ++ + L++ +C+ G I+EA+G+ R+M P +Y+ I
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C+ + F +L M++ PNV T+N ++ LC+ K +A LL M++ G +
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SYN ++ C +N A +L++ M ++ PD T+ ++ + G+ D A+
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTV 293
M ++G T + ++ G+C K GK +A E +V I P+S V
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVC-KVGKTRDALFILETLVKMRILTTPHSLNV 551
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 3/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G + D +++ALCK + + A F K F + L+ G L +A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 64 RKLFDEML-ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
K+FD M E C + ++++ L+ +C+ G ++EA G+ +M G +P +Y++ I
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
A C+ I F + D M PNV TY +I LC++ K+EEA + +M++ P
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+YNA++ +C V A L+T M K P+ T+N +++ L RVG+ +A +
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ M G P + +Y+V++ GLC ++G + A K M I P T + N
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLC-REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 303 LGFLDIIEILADKMER 318
G D+ M R
Sbjct: 489 QGKADVASAFLGLMLR 504
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G KP+++ L+ LC+ ++ A+ K P+V TY+ L+ G G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L M +R C ++ N L+E +C+ G +A +L+ M G PD SY++
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C +++ +++L SM +++ P+ T+ II CK K + A L M+ +G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ DE + ++ C + AL ++ + K ++ H+ N++L +L + +
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + K G PSV TY+ +V GL + G + + + E+M G P ++ N
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLI-RSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ E L M+ S
Sbjct: 626 LCQFGRVEEAEKLLSAMQDS 645
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 8/283 (2%)
Query: 7 KPSIYDLDQLLHALCK----RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
KP++ ++L+ LC+ K V + + DN +P + +Y++L+ GL G ++
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG---LSPDIVSYNVLIDGLCREGHMNT 459
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A KL M D L +++ A CK G D A L M G D + + I
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ +L+++ + ++ + N I+ L K KV+E +L ++ + G P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y ++ ++ + R++ M +P+ + Y +++ L + GR + A ++
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+M+ G P+ TY+VMV G GKL+ A + MV+ G
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYV-NNGKLDRALETVRAMVERG 681
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P I + L+ LC+ H+ A++ + + P T++ ++ G+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A ML + +D + +L++ +CK G +A +L + + S ++
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + +L + + LVP+V TY ++ L ++ + ++++L+ M G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + Y I+ C V A +L++ M V P+ TY +++K V G+ DRA
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
E +M +RG+ + YS ++ G
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGF 696
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 43/279 (15%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E R++F L C ++SLL ++ K A+ R M + G Y +
Sbjct: 149 ELREVFGFRLNYPC------YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIV 202
Query: 122 HA-----------------------------------FCEANDIHSVFRVLDSM-KRYNL 145
+A FC ++ +V D M K
Sbjct: 203 NALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTC 262
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
PN +Y+ +I LC+ ++EEA+ L D+M E+G P +Y ++ CDR ++ A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L M P+ HTY +++ L R G+ + A V M K +PSV TY+ +++G C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K G++ A + +M P T L L +G
Sbjct: 383 -KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 135/339 (39%), Gaps = 59/339 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
+V+ I + + L+ +L L K VK K P+V TY+ LV GL G+
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ + ++ + M C ++ + ++ +C+ G ++EA +L M+ G P+ +Y++
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTY------------------------- 152
+ + + + +M + Y L +++
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716
Query: 153 -------------------NCI-------IRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
CI + +LCK + +E+ L+ ++ERG E +
Sbjct: 717 RETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL-EKA 775
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE-VWESM 245
+ I+ +C + + + LIT + K +P ++ +V++ L + G +RA E V E +
Sbjct: 776 MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
G V V+ + C +G C +VD+
Sbjct: 836 TSNGV---VEKSGVLTYVECLMEGDETGDCSEVIDLVDQ 871
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 152/293 (51%), Gaps = 15/293 (5%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
P + + LL+ L K +++A +F I+V+GL G+L E RKL
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKF--------------TCIMVKGLCKEGKLEEGRKLI 208
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
++ + C +I+ +N+L++ CK G+++ A+G+ E++ G P +Y I+ FC+
Sbjct: 209 EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKK 268
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
D ++ R+L M L NV YN II K+ + +A + ++ MIE G PD +Y
Sbjct: 269 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 328
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N +++ C +V+ A +L+ + + +MP++ +Y ++ + G +DRA+ M +
Sbjct: 329 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 388
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
RG P + TY +VHGL G+++ A E M++ G+ P + +L + L
Sbjct: 389 RGHKPDLVTYGALVHGLV-VAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 440
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 36/298 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGL---GDV--- 57
G P+I + L+ CK+ +++A+ F K + F PTV+TY ++ G GD
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 274
Query: 58 -----------------------------GELSEARKLFDEMLERKCPVDILAHNSLLEA 88
G + +A + + M+E C DI+ +N+L+
Sbjct: 275 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 334
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
C+ G + EA +L + G P+ FSY+ IHA+C+ L M P+
Sbjct: 335 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 394
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+ TY ++ L +V+ A + ++M+ERG PD YN +++ C + ++ A L+
Sbjct: 395 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 454
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M ++V+PD Y ++ +R G D A +++E ++G P + Y+ M+ G CK
Sbjct: 455 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 512
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E G KP I + L+ C+ V A Q + A + P +Y+ L+ G
Sbjct: 316 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 375
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A EM ER D++ + +L+ + AG +D A + +M G PDA Y+I
Sbjct: 376 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 435
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +L M +++P+ F Y ++ +N ++EA +L + IE+G
Sbjct: 436 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 495
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP YNA++ +C + A+ I RM K ++ PD TY+ V+ V+ D A
Sbjct: 496 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 555
Query: 240 EVWESMEKRGFYPSV 254
+++ M K P+V
Sbjct: 556 KMFREMVKMKCKPNV 570
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P + TY+ L+ G G++SEA +L ++ L + + ++ L+ A CK G D A
Sbjct: 323 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 382
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM G +PD +Y +H A ++ + + M + P+ YN ++ LCK
Sbjct: 383 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 442
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K+ A LL EM+++ PD + Y ++ ++ A +L ++ + P
Sbjct: 443 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 502
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++K + G A M+KR P TYS ++ G K+ L+ A K F M
Sbjct: 503 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH-DLDGAQKMFREM 561
Query: 282 VDEGIPP 288
V P
Sbjct: 562 VKMKCKP 568
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 22/234 (9%)
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
P++ A++SLL+ + ++ E +L MR P + SI I A+ ++ +
Sbjct: 91 PINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALE 150
Query: 136 VLD-SMKRYNLVPNVFTYN-------------------CI-IRKLCKNEKVEEAYQLLDE 174
+ +K Y P+V N CI ++ LCK K+EE +L+++
Sbjct: 151 LYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIED 210
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
+G P+ YN ++ +C + ++ MA L + + +P TY ++ + G
Sbjct: 211 RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGD 270
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
F + M RG +V Y+ ++ K G + +A + E M++ G P
Sbjct: 271 FKAIDRLLMEMNSRGLTVNVQVYNTIIDAR-YKHGHIVKAVETIEGMIECGCKP 323
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G+ P I + ++ CK +K A + K P TYS ++ G +L
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551
Query: 61 SEARKLFDEMLERKCPVDIL 80
A+K+F EM++ KC +++
Sbjct: 552 DGAQKMFREMVKMKCKPNVM 571
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H CK +++A FD+ K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E +L M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 DEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L+P++ TYN +I LCK +++A+ L+DEM +G
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEXC-KKGDVWTGSKLLKEMQRXGYVP 414
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ CK G I A + + G P S++ ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ M+ + P+V+TY+ +I LCK K+++A +L DEM++ G P+
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M ++++PD TYN ++ L + G +A ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 SMKGLKPDKITYTTLIDGXC-KEGDLETAFEYRKRMIKENI 342
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
+S L+ + G L +A + + E K V ++E + K G E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G + ++I +H FC+ +I V DS+ ++ L P+V ++N ++ K ++
Sbjct: 129 ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
E ++L M G +PD ++Y+ ++ C ++++ A L M ++P+ T+ ++
Sbjct: 189 EGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLI 248
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ GR D A E++ M + P + TY+ +++GLC KKG L++A + M +G+
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLC-KKGDLKQAHDLIDEMSMKGL 307
Query: 287 PP 288
P
Sbjct: 308 KP 309
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 18/257 (7%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T +I L
Sbjct: 53 AAILETKGT-QRSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ C E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G D + M+ G +P V TYSV+++GLCK+ K+++A + F+
Sbjct: 172 VSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKES-KMDDANELFD 230
Query: 280 MMVDEGIPPYSSTVEML 296
M+B G+ P T L
Sbjct: 231 EMLBNGLVPNXVTFTTL 247
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + + LL A CK + + A + D + E TPT TY++++ G+ G+
Sbjct: 178 MLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGD 237
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ AR+L + + C + + +N++L+ + AG ++ ++ EM S P + S+
Sbjct: 238 VDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSV 297
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ R+L+ M +++ N+ TYN ++ LC+ V+ A LL M G
Sbjct: 298 VISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDG 357
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN ++ C+ A L+ +M++ + +PD T+N ++ L + G +A
Sbjct: 358 CKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAV 417
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
EV++ M ++G P+ TYS ++ GL K GK+E++ + M +G P
Sbjct: 418 EVFKQMPEKGCCPNSVTYSSVIEGL-AKTGKMEQSLELLNEMGSKGFNP 465
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 138/287 (48%), Gaps = 3/287 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P+ + ++ +C+ V A + ++ + TP Y+ +++GL G +
Sbjct: 217 GCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDV 276
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM CP + ++ ++C+ G A +L +M + +Y+ +
Sbjct: 277 EELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSG 336
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
CE + +L +M+ PN+FTYN +++ LC E+ E+A L+ +M + PD
Sbjct: 337 LCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPD 396
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N I+ + C + A+ + +M ++ P+ TY+ V++ L + G+ +++ E+
Sbjct: 397 ILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLN 456
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
M +GF P ++ Y ++ L ++ KL EA + + D GI P +
Sbjct: 457 EMGSKGFNPEIN-YHLLAECL-NEEDKLVEAIQMVHKLQDTGISPQA 501
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 152/358 (42%), Gaps = 56/358 (15%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L C+ + A + D P+ Y+ L+ L G++ +A L D ML R C
Sbjct: 126 LADGYCRVGRLDEARRVVDGMP--VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGC 183
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
D++ +N LLEA CK +A ++ MR G P +Y++ + C D+
Sbjct: 184 APDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARE 243
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
+L+S+ Y PN YN +++ L + E+ +L+ EM P E + + +++ C
Sbjct: 244 LLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
A+RL+ +M+K + + TYN V+ L G D A + +M+ G P++
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIF 363
Query: 256 TYSVMVHGLCK----------------------------------KKGKLEEACKYFEMM 281
TY+++V GLC +KG +A + F+ M
Sbjct: 364 TYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQM 423
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA--DKMERSTSCTIQELANAMRGKTGF 337
++G P S T + +IE LA KME+S EL N M G GF
Sbjct: 424 PEKGCCPNSVT------------YSSVIEGLAKTGKMEQSL-----ELLNEM-GSKGF 463
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 10/261 (3%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
GEL A ++ + L CP D+ N L+ +C+ G +A R + + G+ A +Y
Sbjct: 70 GELDAALRVVESSL---CPPDVALANRLVRDLCRRGRPADAA---RVVEACGSAATAVTY 123
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
S +C + RV+D M ++P+ + YN ++ LC +V +A LLD M+
Sbjct: 124 SALADGYCRVGRLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLY 180
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD +YN +L C A+ LI M E P TYN+++ + R G D
Sbjct: 181 RGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDY 240
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A E+ S+ G P+ Y+ ++ GL + G+ E+ + M E PP +T+ ++
Sbjct: 241 ARELLNSLPSYGCTPNTVNYNTVLKGL-RTAGRWEDVEELIAEMFSENCPPSEATLSVVI 299
Query: 298 NRLVGLGFLDIIEILADKMER 318
+ L G L +KM +
Sbjct: 300 SSLCQEGLFQRAIRLLEKMSK 320
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 9/268 (3%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
D+ L +L R + A + +++ P V + LVR L G ++A ++ +
Sbjct: 60 DRRLSSLVHRGELDAALRVVESSL--CPPDVALANRLVRDLCRRGRPADAARVVEACGSA 117
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
V +++L + C+ G +DEA ++ M + P A++Y+ +HA C +
Sbjct: 118 ATAV---TYSALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRDA 171
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+LD+M P+V TYN ++ CK +A +L+D M G P +YN I+
Sbjct: 172 LVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDG 231
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C +V+ A L+ + P+ YN VLK L GR++ E+ M PS
Sbjct: 232 MCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPS 291
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+T SV++ LC ++G + A + E M
Sbjct: 292 EATLSVVISSLC-QEGLFQRAIRLLEKM 318
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLF 67
+I + ++ LC++ HV A N + + P + TY+ILV+GL + +A L
Sbjct: 326 NIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLM 385
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+M + C DIL N+++ +C+ G +A + ++M G P++ +YS I +
Sbjct: 386 AKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKT 445
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
+ +L+ M P + Y+ + L + +K+ EA Q++ ++ + G +P Y
Sbjct: 446 GKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLY 504
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
N IL C + + A+ +++ M + MPD TY+++++ L G A E+ ++
Sbjct: 505 NTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSS 564
Query: 248 R 248
R
Sbjct: 565 R 565
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP+I+ + L+ LC + + A ++ + P + T++ ++ L G +A
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++F +M E+ C + + ++S++E + K G ++++ +L EM S G P+ +Y +
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAEC 475
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
E + + +++ ++ + P YN I+ LC+N K ++A +L M+ G PD
Sbjct: 476 LNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPD 535
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
E +Y+ ++ + A L++ ++ +V+ D N
Sbjct: 536 ESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
+ GI P + +L LC+ A N + P TYSIL++GL G +
Sbjct: 494 DTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMK 553
Query: 62 EARKLFDEMLERKCPVDILAHN--SLLE 87
EAR+L + R VD L N SLL+
Sbjct: 554 EARELLSTLSSRDVIVDNLIKNDASLLD 581
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 155/310 (50%), Gaps = 16/310 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF---------------DNAKHEFTPTVK 45
M++ I P + + L+++L ++K+ ++ TP ++
Sbjct: 65 MIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIR 124
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
T++ LV GL GE+ +AR + M++++ +I+ +NSL++ +++A + +
Sbjct: 125 TFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTI 184
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G P+ SY + I+ C+ + + M N+VP+ YN +I LCK+ ++
Sbjct: 185 SLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRI 244
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
+ + + EM +RG + +YN++L C +V+ A+ L+T++ + + P+ +TY ++
Sbjct: 245 YDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTIL 304
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + GR A EV++ + +G+ Y+VM++GLC K+G L+EA M D
Sbjct: 305 VDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLC-KEGFLDEALSLLSKMEDNK 363
Query: 286 IPPYSSTVEM 295
P T E+
Sbjct: 364 CTPDGVTYEI 373
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVR------------ 52
+KP + + ++ LCK K V + + P V TY+ L+
Sbjct: 35 VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRK 94
Query: 53 --GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
G +G++ EA L ++M + +I +L++ +CK G + +A +L M
Sbjct: 95 EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRV 154
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
EP+ +Y+ + + +++ ++ +++ + PNV +Y +I LCKN+ V+EA
Sbjct: 155 EPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAAN 214
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L EM + PD +YN+++ C + I M + TYN +L L
Sbjct: 215 LFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLC 274
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ + D+A + ++ +G P++ TY+++V GLCK G+L +A + ++ ++++G +
Sbjct: 275 KNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKN-GRLRDAQEVYQDLLNKGYQLDA 333
Query: 291 STVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSE 343
++ N L GFLD L KME CT + + + F R+E
Sbjct: 334 RIYTVMINGLCKEGFLDEALSLLSKME-DNKCTPDGVTYEITIRALFESDRNE 385
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ ++P+I + L+ K V A Q F+ + TP V++Y +++ GL
Sbjct: 149 MIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKM 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF EM + D +A+NSL++ +CK+ I + + EM G + +Y+
Sbjct: 209 VDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNS 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + +L +K + PN++TY ++ LCKN ++ +A ++ +++ +G
Sbjct: 269 LLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKG 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
D Y ++ C ++ AL L+++M PD TY + ++ L R
Sbjct: 329 YQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDR 383
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL-- 159
L + + +PD Y+ I C+ + + M + P+V TYN +I L
Sbjct: 27 LNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLN 86
Query: 160 -----CKNE-------KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ E +++EA LL++M + P+ ++ ++ C EV A ++
Sbjct: 87 FVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVL 146
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M K+ V P+ TYN ++ V ++A +++ ++ RG P+V +Y VM++GLCK
Sbjct: 147 AIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKN 206
Query: 268 KGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
K ++EA F+ M + + P Y+S ++ L
Sbjct: 207 K-MVDEAANLFKEMHSKNMVPDTVAYNSLIDGL 238
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 79/201 (39%), Gaps = 36/201 (17%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ +++ LCK K V A F P Y+ L+ GL + +
Sbjct: 188 GMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDV 247
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMC--------------------------------- 90
EM +R P +I+ +NSLL+ +C
Sbjct: 248 WDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDG 307
Query: 91 --KAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
K G + +A + +++ + G + DA Y++ I+ C+ + +L M+ P+
Sbjct: 308 LCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPD 367
Query: 149 VFTYNCIIRKLCKNEKVEEAY 169
TY IR L ++++ E Y
Sbjct: 368 GVTYEITIRALFESDRNEILY 388
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK +++A FD K P+V +Y+ L+ G +G+
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+E KL M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 187 LNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTT 246
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + V M +L+P++ TYN +I LCK + +A+ L+DEM +G
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M G P TY+++++ C KKG + + K + M +G P
Sbjct: 367 KMMREMLSFGLKPDTGTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHAP 414
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 131/250 (52%), Gaps = 1/250 (0%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 96
+H+F T ++ L + + ++E+LE P + N L+ CK G+I
Sbjct: 94 EHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIR 153
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
A + + G P SY+ ++ + D++ F++ +M + P+V+TY+ +I
Sbjct: 154 LAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLI 213
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
LCK K+++A +L +EM+ +G P+ ++ ++ HC V++A+ + +M ++++
Sbjct: 214 NGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLL 273
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
PD TYN ++ L + G ++A ++ + M +G P TY+ ++ G C K+G L+ A +
Sbjct: 274 PDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCC-KEGDLDTAFE 332
Query: 277 YFEMMVDEGI 286
+ + M+ E I
Sbjct: 333 HRKRMIQENI 342
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 27/326 (8%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH----------------EFTPTVKT----- 46
P+ LH+ C H HQ F AK F ++T
Sbjct: 4 PANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQR 63
Query: 47 -----YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
+S L+ + G L +A + + E K V +LE + K +
Sbjct: 64 SDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAF 123
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 124 YEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ E ++L M G PD ++Y+ ++ C ++++ A L M + ++P+ T
Sbjct: 184 LGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVT 243
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ + GR D A EV++ M + P + TY+ +++GLC KKG L +A + M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLC-KKGALNQAHDLMDEM 302
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLD 328
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 151/319 (47%), Gaps = 2/319 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+KPSI + LL CK+ + A + + E F P V TY L+RG +
Sbjct: 427 MKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKD 486
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L DEM + + +N L+ +C + E GML+ S G P +Y+
Sbjct: 487 FDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNS 546
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F +A + S F V M+ L PN+ TY I C+ + A ++L+++ RG
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YNA++ C ++ AL+L+ + K+ + P+ YN ++ + +
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ +ESM K G STY+ ++ G K G + A + + M+ +G P + T L +
Sbjct: 667 KFYESMIKGGIVADTSTYTTLIDGF-SKDGNVAFALELYSEMMAKGYIPDAFTFTALTHG 725
Query: 300 LVGLGFLDIIEILADKMER 318
L G +D + L ++M R
Sbjct: 726 LCRSGDIDGAKKLLEEMRR 744
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 2/300 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G+ + Y + L++ +C V + E F PT+ TY+ ++ G G
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ +M E+ P +I+ + S ++ C+ G D A ML ++R G +PD +Y+
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC+ ++ ++L + + L PN YN +I ++E + + MI+ G
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +Y ++ V AL L + M + +PD T+ + L R G D A
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAK 736
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ E M + P+V Y+++++G + KL+EA + + M++ GI P +T ++L ++
Sbjct: 737 KLLEEMRRLDVRPNVFIYNMLINGYL-RDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M G+ PS ++L +L L + K A F+ P V TY+ L+ +L
Sbjct: 358 MTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKL 417
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA LFD M + I +NSLL CK G +DEA + EM G +P+ +Y
Sbjct: 418 REALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ + D + + +LD MK+ + N +TYN +I +C ++V E +L + G
Sbjct: 478 MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGF 537
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +YN+I+ + A + +M ++ + P+ TY + R G D A +
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
+ + +RG P + Y+ +++G C ++G + A + +++ +G+ P Y+S +
Sbjct: 598 MLNDVRRRGLQPDIVAYNALINGFC-QEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656
Query: 297 RN 298
+N
Sbjct: 657 KN 658
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P +K+ + L+ +A LF EM R VD ++L+ A K G ++A +
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM +PD Y++ I A C+ D R+L MK FTY ++ L K
Sbjct: 215 FDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVK 274
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++EEA ++ DEM + G D ++ +C R EV AL L K+ ++P +
Sbjct: 275 TGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVM 334
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++++ +VG +A E+ M +G PS S+++ GL + + ++A FE M
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR-RWKDAVCLFEEM 393
Query: 282 VDEGIP 287
D G+P
Sbjct: 394 ADSGLP 399
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 144/320 (45%), Gaps = 4/320 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G + + D L+ A K + A + FD E P + Y++ + L +G+ A
Sbjct: 187 GYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRA 246
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ EM E + ++++ + K G ++EA + EMR G + D + +
Sbjct: 247 LRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRG 306
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C ++ + + + +VP Y +IR + ++AY+L +M +G P
Sbjct: 307 YCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPS 366
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ + +L + A+ L M ++ +PD TYN ++ + + A +++
Sbjct: 367 TFELSLVLKGLLNDRRWKDAVCLFEEMA-DSGLPDVFTYNNLIHWHCQAHKLREALNLFD 425
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST-VEMLRNRLVG 302
M+K G PS++TY+ ++ G C KKG ++EA K + M EG P T + ++R +
Sbjct: 426 RMKKAGVKPSINTYNSLLMGYC-KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAK 484
Query: 303 LGFLDIIEILADKMERSTSC 322
F + +L + + SC
Sbjct: 485 KDFDNAYALLDEMKQNGVSC 504
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+VP++ + ++ + + ++A L EM RG D W ++A+++ A
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
+RL M + PD+ Y + + L ++G RA + M++ GF TY MV
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271
Query: 264 LCKKKGKLEEACKYFEMMVDEG 285
L K G++EEA + + M D G
Sbjct: 272 LV-KTGRMEEALRVNDEMRDAG 292
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S A + M+ R DI + LL + + +A + EMR G DA+ +
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ A C +H E+A +L DEM
Sbjct: 199 MSA-CLKEGMH----------------------------------EDAVRLFDEMPGAEI 223
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+PD+ Y + C + ALR++ M + TY ++ +LV+ GR + A
Sbjct: 224 DPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALR 283
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V + M G V + ++ G C ++ ++ A F+ + +GI P
Sbjct: 284 VNDEMRDAGKKMDVIVATTLMRGYCLRQ-EVGNALNLFKETLKDGIVP 330
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P I+ L++ LC K K FF+ ++IL+ L G
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGR 462
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA++L D ML D++++N+L++ C G IDEA +L M SIG +PD F+Y+
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H +C+A I + + M L P V TYN I+ L + + EA +L MI
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNR 582
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++Y IL C V+ A ++ + +++ D T N+++ L++ GR + A
Sbjct: 583 RKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAM 642
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ ++ G P V TY ++ L K+G LEE + F M + G P S + L
Sbjct: 643 DLFATISAYGLVPDVETYRLIAENLI-KEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701
Query: 300 LVGLG 304
L+ G
Sbjct: 702 LLHRG 706
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 169/377 (44%), Gaps = 41/377 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
MV G+ P + + + +A K+ + A FD + ++ +P V Y L+ L +G
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M+ DI +SL+ +C ++A + E+ G +A ++I
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNI 452
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + R++D M R ++ P+V +YN ++ C +++EA +LLD M+ G
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIG 512
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PDE++YN +L +C ++ A L M + + P TYN +L L ++GRF A
Sbjct: 513 LKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAK 572
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
E++ +M + TY+++++GLC+
Sbjct: 573 ELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGAL 632
Query: 267 -KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQ 325
K G+ E+A F + G+ P T ++ L+ G L+ ++ L ME + +
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNS 692
Query: 326 ELANAM------RGKTG 336
+ NA+ RG G
Sbjct: 693 RMLNALVRWLLHRGDIG 709
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 3/335 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M G++P LL LCK A FD+ + P V Y IL+ G G
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LSE D M+ D N + A K IDEA + +MR P +Y
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGA 382
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C+ + + M + P++F ++ ++ LC +K E+A +L E++++G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +N ++ C V A RLI M + +V PD +YN ++ GR D A
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M G P TY+ ++HG CK + ++++A F M+ +G+ P T + +
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKAR-RIDDAYSLFREMLMKGLTPGVVTYNTILHG 561
Query: 300 LVGLG-FLDIIEILADKMERSTSCTIQELANAMRG 333
L +G F + E+ + + C I + G
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNG 596
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----HQFFDNAKHEFTPTVKTYSILVRGLGD 56
M EFG ++ + LL LC K + A H D+ TP V TY+ ++ GL
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ A+ +F M+++ + + L+ G E ML+EM + G +PD
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVI 274
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y++ + C+ + DS+ R + P+V Y ++ + E + LD M+
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMV 334
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G +PD +N + + +A ++ A+ + +M ++ + P Y ++ L ++GR D
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVD 394
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
A + M G P + +S +V+GLC K E+A K F ++D+GI
Sbjct: 395 DAVLKFNQMINEGVTPDIFVFSSLVYGLCTVD-KWEKAEKLFFEVLDQGI 443
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV G+KP + + LLH CK + + A+ F + TP V TY+ ++ GL +G
Sbjct: 508 MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA++L+ M+ + DI + +L +C+ +DEA M + + S + D F+ +I
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + ++ Y LVP+V TY I L K +EE +L M E G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR 231
P+ NA++ + R ++ A ++++ ++N + T +M++ + R
Sbjct: 688 TAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 132/324 (40%), Gaps = 50/324 (15%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLL----EAMCKAGN---IDEAHGMLREMRS 107
G +G L +A KLFDEML P + N LL A C + + + + M+RE S
Sbjct: 28 GSLG-LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIREC-S 85
Query: 108 IGAEPDAFSYSIFIHAFCEANDIHSVFR-------------------------------- 135
+ P + +Y+I I FC + F
Sbjct: 86 VKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVD 145
Query: 136 -----VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN---PDEWSY 187
+L M + NV +YN +++ LC ++ EEA +L+ M + G P+ +Y
Sbjct: 146 EATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTY 205
Query: 188 NAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
++ C V+ A + M + V P+ HTY ++ + G++ ++ + M
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMST 265
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
G P Y+V++ LC K G+ EA F+ ++ +GI P+ + +L + G L
Sbjct: 266 HGLQPDCVIYAVLLDYLC-KNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324
Query: 308 IIEILADKMERSTSCTIQELANAM 331
+ D M R+ + N M
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIM 348
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 36/293 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ + + L+ LC+ V A + D + + P V +Y+ LV G G + EA
Sbjct: 442 GIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEA 501
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP----------- 112
KL D M+ D +N+LL CKA ID+A+ + REM G P
Sbjct: 502 AKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561
Query: 113 ------------------------DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
D ++Y+I ++ C N + F++ S+ +L +
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLD 621
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
+FT N +I L K + E+A L + G PD +Y I + L +
Sbjct: 622 IFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFS 681
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
M + P+ N +++ L+ G RA ++++ F ST S+++
Sbjct: 682 AMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 148/304 (48%), Gaps = 2/304 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ L K ++ + F+ + PT TY++++ GL L +A
Sbjct: 138 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 197
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F++M+++ C D + + +L++ KA +DEA +L M + G EP A +Y +H
Sbjct: 198 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 257
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + I+ V+ M+ P +F + ++ + EEAYQ+L EM RG PD
Sbjct: 258 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 317
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y +++ V A + M ++ PD TY +++ ++G + A E+ E
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 377
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M K G P Y+ ++ G K + ++++A ++ MV GI P + T +L + L
Sbjct: 378 LMAKSGVGPDCFAYNSLMDGYVKLE-RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 436
Query: 304 GFLD 307
G D
Sbjct: 437 GKTD 440
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 156/349 (44%), Gaps = 37/349 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV---------------- 44
M++ G +P + L+H CK +V H+ + A F P V
Sbjct: 33 MIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAGDL 92
Query: 45 ----------------KTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEA 88
+Y+ +++GL D + EA +LF+E+ C +++A+ ++++
Sbjct: 93 DTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDG 152
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+ KAG I++ EM P +Y++ I C+A + +V + M + VP+
Sbjct: 153 LLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 212
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
TY +I K K++EA +LLD M+ +G P +Y +I+ C +N A +I
Sbjct: 213 TITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIA 272
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+M + P + +L + GR + A +V M RG P V Y+ ++ L
Sbjct: 273 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID-LLFST 331
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL----DIIEILA 313
G++ EA F+ M+++G P + T + +G + +I+E++A
Sbjct: 332 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G +P ++ LL + + A+Q + P V Y+ L+ L G
Sbjct: 274 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EAR +FD M+E+ C D L + ++++ K GN++ A +L M G PD F+Y+
Sbjct: 334 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 393
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ + + + F V D M + PN T+N ++ L K+ K + A+ L EM+E+
Sbjct: 394 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE 453
Query: 180 ANPDEW-SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
P SY ++ V+ A M ++P+ HTY ++ L + GR A
Sbjct: 454 EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
++ E M K G P V YS ++ GL ++ A F+ M+ G P T ++LR
Sbjct: 514 KKLVEDMVKLGVNPDVQAYSALITGLIDSS-MVDTAWDVFQEMMKRGCAPNEVTYKVLR 571
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 3/306 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ G P L+ K + A + D + PT TY +V G +
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 263
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA+++ +M ER C + SLL G +EA+ +L EM + G PD Y+
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + V DSM P+ TY II+ K VE A ++L+ M + G
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 383
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN+++ + V+ A + RM + P+ T+N+++ L + G+ DRA
Sbjct: 384 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 443
Query: 240 EVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+++ M EK P++ +Y++++ GL K G++ EA F+ M+D GI P T L
Sbjct: 444 SLFKEMLEKEEVPPTLVSYTILIDGL-GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIY 502
Query: 299 RLVGLG 304
L G
Sbjct: 503 SLAKAG 508
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 144/283 (50%), Gaps = 14/283 (4%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT+ +Y+ ++ GL + ++ EA K F+ M++ C D++A +L+ CKAG H +
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHS-VFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
L + PD F Y+ IH +C+A D+ + FR + +V +Y +I+ L
Sbjct: 65 LNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL----DVISYTTVIKGLA 119
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+++++EA +L +E+ G +P+ +Y A++ + L+ M+ + +P R
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY +V+ L + A +V+E M ++G P TY+ ++ G K K++EA K ++
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF-SKASKMDEARKLLDV 238
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDII----EILADKMERS 319
M+ +G P + T + + G LD+I E++A ER
Sbjct: 239 MLTKGPEPTAVTYGSIVH---GFCKLDMINEAKEVIAQMRERG 278
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 7/223 (3%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C I+++N+++ + +DEA+ M G EPD +++ IH FC+A
Sbjct: 3 CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH 62
Query: 135 RVLD-SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
++L+ ++KR+ P+VF Y +I CK ++ Y + A+ D SY ++
Sbjct: 63 KLLNQALKRFR--PDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKG 117
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
D ++ A L + P+ Y V+ L++ GR + + +E M P+
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+TY+V++ GLCK + L +ACK FE MV +G P + T L
Sbjct: 178 RTTYTVVIDGLCKAQ-MLPDACKVFEQMVQKGCVPDTITYTTL 219
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVG 58
MV GIKP+ + L+H L K A F K E PT+ +Y+IL+ GLG G
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+SEA F EM++R + + SL+ ++ KAG I EA ++ +M +G PD +YS
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIR 157
I +++ + + + V M + PN TY + R
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRR 572
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P ++ K +V+ A + + AK P Y+ L+ G +
Sbjct: 344 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 403
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYS 118
+ +A ++D M+ + + N L+ + K G D A + +EM P SY+
Sbjct: 404 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYT 463
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I +A + F M ++P TY +I L K ++ EA +L+++M++
Sbjct: 464 ILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 523
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
G NPD +Y+A++ D + V+ A + M K P+ TY ++ + GR
Sbjct: 524 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 133/239 (55%), Gaps = 1/239 (0%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ EA+ +F M+++ +++ ++SL++ C +++A + M G PD SY
Sbjct: 233 GKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSY 292
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I+ FC+ + + + M ++PNV TYN +I LCK+ K+ A +L+DEM +
Sbjct: 293 NILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHD 352
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD +Y+++L C + A+ L+T++ + + P+ +TY +++ L + GR +
Sbjct: 353 RGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPED 412
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++E + +G+ +V+TY+VM+H C G EA M + G P + T E++
Sbjct: 413 AQNIFEDLLVKGYNINVNTYTVMIHVFC-NNGMFGEALAMLSKMEENGCIPNAVTYEII 470
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G KP++ L+ C K V A F+N A+ P +++Y+IL+ G +
Sbjct: 245 MMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKM 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A LF+EM RK +++ +NSL++ +CK+G I A ++ EM G PD +YS
Sbjct: 305 TDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + +L +K L PN++TY +I LCK + E+A + ++++ +G
Sbjct: 365 LLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKG 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N + +Y ++ C+ AL ++++M + +P+ TY ++++ L D+A
Sbjct: 425 YNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAE 484
Query: 240 EVWESMEKRGF 250
++ M RG
Sbjct: 485 KLLLEMITRGL 495
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 7/220 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G+ P I + L++ CK K A F+ + P V TY+ L+ GL G+
Sbjct: 280 MAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK 339
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A KL DEM +R P DI+ ++SLL+A+CK D+A +L +++ G +P+ ++Y+I
Sbjct: 340 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTI 399
Query: 120 FIHAFCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I+ C+ D ++F L +K YN+ NV TY +I C N EA +L +M
Sbjct: 400 LINGLCKGGRPEDAQNIFEDL-LVKGYNI--NVNTYTVMIHVFCNNGMFGEALAMLSKME 456
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
E G P+ +Y I+ D+ E + A +L+ M ++
Sbjct: 457 ENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 496
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 19 ALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV 77
CK VK A F K F P V TYS L+ G V E+++A+ +F+ M +
Sbjct: 228 TFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNP 287
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
DI ++N L+ CK D A + EM P+ +Y+ I C++ I +++
Sbjct: 288 DIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLV 347
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
D M P++ TY+ ++ LCKN ++A LL ++ ++G P+ ++Y ++ C
Sbjct: 348 DEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKG 407
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
A + + + + +TY +++ + G F A + ME+ G P+ TY
Sbjct: 408 GRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTY 467
Query: 258 SVMVHGLCKK 267
+++ L K
Sbjct: 468 EIIIRSLFDK 477
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ CK G + EA + M G +P+ +YS + +C +++ + ++M + +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P++ +YN +I CK + + A L +EM R P+ +YN+++ C +++ AL+
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ M PD TY+ +L L + D+A + ++ +G P++ TY+++++GLC
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405
Query: 266 KKKGKLEEACKYFEMMVDEG 285
K G+ E+A FE ++ +G
Sbjct: 406 -KGGRPEDAQNIFEDLLVKG 424
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 4/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE G +P + L++ LC V A D E + Y ++ GL +G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH---QPYGTIINGLCKMGDT 57
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A L +M E ++ +N++++ +CK G+ A + EM G PD +YS
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +FC + ++L M + P+V T++ +I L K KV EA ++ +M+ RG
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +YN+++ C + +N A R++ M ++ PD T++ ++ + R D E
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M +RG + TY+ ++HG C + G L+ A +M+ G+ P
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDLLNVMISSGVAP 284
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + ++ + C+ A Q D + + P V T+S L+ L G++SEA
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ +ML R + +NS+++ CK +++A ML M S PD ++S I+
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + + + M R +V N TY +I C+ ++ A LL+ MI G P+
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTK 212
++ ++LA C + E+ A ++ + K
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 1/248 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E IK + + ++ LCK H A F + P V TYS ++ G
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +L +M+ER+ D++ ++L+ A+ K G + EA + +M G P +Y+
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + ++ R+LDSM + P+V T++ +I CK ++V+ ++ EM RG
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y ++ C +++ A L+ M V P+ T+ +L L +A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 240 EVWESMEK 247
+ E ++K
Sbjct: 307 AILEDLQK 314
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 142/288 (49%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H+ K +++A FD K P+V +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E +L + M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 188 DEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEMI +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ +C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 XPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFC-KKGDVWTGSKLLKEMQRDGYMP 414
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E LE P + N L+ + K G I A + + P S++ ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ D+ FR+ ++M+ + P+V+TY+ +I LCK K+++A L DEM+++G P+
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 IMKGLXPDKITYTTLIDGNC-KEGDLETAFEYRKRMIKENI 342
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 1/257 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+ ++ ++PS+ + L++ K + + + + P V TYS+L+ GL +
Sbjct: 162 ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESK 221
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A LFDEML++ + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ ++D M L P+ TY +I CK +E A++ MI+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + P+ TY M++ + G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 240 EVWESMEKRGFYPSVST 256
++ + M++ G+ PSV T
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 121/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK G+
Sbjct: 9 FRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRK----------------GKGSASAVF 52
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ E + D + +S I A+ E+ + K + T ++ L
Sbjct: 53 AAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + +E +E G + +N ++ E+ +A + +TK ++ P
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +++G D + +M+ G P V TYSV+++GLCK+ K+++A F+
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKES-KMDDANVLFD 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D+G+ P T L + G +D+ +EI + +S S
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
MV I P++Y + L+ A C++ + A F+ K P + T++ L+ G G
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EARKLFD + ER D+ ++ L+ CK IDEA + EMR D YS
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C++ I + + ++ PNV TYN +I CK + ++ +L M +G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ +C + A+ L++ M +N+ PD TYN + L + GR A
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E+++ M G V+TY+V++ CK +
Sbjct: 525 ELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 6 IKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+KP+I + ++ + CK + K + P + TY+ L+RG G+ E +
Sbjct: 220 VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVK 279
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L EM+ + ++ N L++A C+ G + EA GM M G +PD +++ I
Sbjct: 280 QLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C ++ ++ D++ ++P+V++Y +I CK ++++EA L +EM + D
Sbjct: 340 CLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
Y++++ C ++ A L + + + P+ TYN+++ ++ D E+++
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
M +G P+V TY+++++G CK K ++ EA +M + + P S T L + L G
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSK-RIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG 518
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ L ++ LC V+ A F DN A Y L+ GL +G +A
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDA 208
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + +I+ +N ++++ CK +A + ++ +G +PD +Y+ I
Sbjct: 209 FQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRG 268
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC V +++ M N+ PNV+T+N +I C+ K+ EA + + M++RG PD
Sbjct: 269 FCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD 328
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N +++ HC V A +L + + ++PD +Y +++ + R D A ++
Sbjct: 329 IVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFN 388
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M + + YS ++ GLC K G++ A + F + ++G PP T +L
Sbjct: 389 EMRCKNMVLDIVLYSSLIDGLC-KSGRISYAWELFSTINNDGPPPNVITYNIL 440
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKL 66
PS+ + ++ ++ K KH VA + TP++ T SI + +GE+ A +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+L+R + + ++++ +C G + +A + + G D Y I+ C+
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
F++L M+ + PN+ YN II CK+E +A L ++++ G +PD +
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y +++ C + +L+ M +N+ P+ +T+N+++ R G+ A ++ M
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP--YSSTVEML 296
KRG P + T++ ++ G C G + EA K F+ + + GI P +S T+ ++
Sbjct: 322 KRGQQPDIVTFNTLISGHC-LHGNVLEARKLFDTVFERGILPDVWSYTILII 372
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELS 61
E GI P ++ L+ CK K + A F+ + + YS L+ GL G +S
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +LF + P +++ +N L++A CK +ID + + M G P +Y+I I
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 476
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C++ I +L M+ NL P+ TYN + LCK+ ++ +A++L M G
Sbjct: 477 NGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPP 536
Query: 182 PDEWSYNAILAYHCDRAEV 200
D +YN +L C +V
Sbjct: 537 VDVATYNVLLDAFCKAQDV 555
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 54 LGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPD 113
L + +A LF+ ++ + ++ N+++ ++ K + A +L++M G P
Sbjct: 59 LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118
Query: 114 AFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
F+ SI+I+ +C ++ F VL + + PN T +++ LC N +V++A D
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+ +G DE Y ++ C A +L+ M + V P+ YNM++ +
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDE 238
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+A +++ + G P + TY+ ++ G C + G+ E + MV++ I P T
Sbjct: 239 LTCKARDLYLKIVDMGIDPDILTYTSLIRGFC-RTGQWGEVKQLMCEMVNKNINPNVYTF 297
Query: 294 EML 296
+L
Sbjct: 298 NVL 300
>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 567
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 10/350 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGL-GDVG 58
MV+ ++P++ + +L LCKR V A F++ P V TY+ L++GL G+VG
Sbjct: 179 MVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVG 238
Query: 59 ELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
E LF+EM+ K V D+ + L+ CK G + A M+ M IG E + +Y
Sbjct: 239 GWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTY 298
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKR--YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+ I +C N + RV D M R +P+V TYN +I CK +KV +A LL EM
Sbjct: 299 NSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEM 358
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ +G +PD +++ +++ + + A L M + +P T +VL L +
Sbjct: 359 VGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLD 418
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A ++ +MEK G + Y++M+ G+C K GKL +A K ++ +G+ S T +
Sbjct: 419 SEAMTLFRAMEKSGLDLDIVIYNIMLDGMC-KMGKLNDARKLLSFVLVKGLKIDSYTWNI 477
Query: 296 LRNRLVGLGFLDIIEILADKMERS----TSCTIQELANAMRGKTGFRKSR 341
+ L G LD E L KM+ + C+ + K +SR
Sbjct: 478 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSR 527
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 8/301 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ---FFDNAKHEFTPTVKTYSILVRGLGDV 57
+ E GI P + L++ CK + A F E V TY+ L+ G
Sbjct: 251 VAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELN--VVTYNSLISGYCLR 308
Query: 58 GELSEARKLFDEMLERK--CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
+ EA ++FD M+ C ++ +NSL+ CK +++A +L EM G +PD F
Sbjct: 309 NRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVF 368
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+++ I F E + + +MK VP + T ++ L K EA L M
Sbjct: 369 TWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAM 428
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G + D YN +L C ++N A +L++ + + + D +T+N+++K L R G
Sbjct: 429 EKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLL 488
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
D A E+ M++ G P+ +Y+V V GL +K + + KY ++M D+G P ++T E+
Sbjct: 489 DDAEELLRKMKENGCPPNKCSYNVFVQGLLRKY-DISRSRKYLQIMKDKGFPVDATTAEL 547
Query: 296 L 296
L
Sbjct: 548 L 548
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 143/299 (47%), Gaps = 12/299 (4%)
Query: 13 LDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSIL------VRGLGDVGELSEARK 65
L+ L++ LC+ + + K PT+ T + + V GL +G+ S A +
Sbjct: 115 LNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALE 174
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+M++R +++ +N++L+ +CK G + EA G+ EM + EP+ +Y+ I C
Sbjct: 175 SLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLC 234
Query: 126 -EANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
E + + M +VP+V T++ ++ CK + A ++ MI G +
Sbjct: 235 GEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELN 294
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTK--ENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+YN++++ +C R + A+R+ M + E +P TYN ++ +V + ++A +
Sbjct: 295 VVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSL 354
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M +G P V T++ ++ G + GK A + F M D+G P T ++ + L
Sbjct: 355 LSEMVGKGLDPDVFTWTSLIGGF-FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGL 412
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 13/218 (5%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI------FIHAFCEANDIH 131
D+ N L+ +C+ +L M IG EP + + ++ C+ D
Sbjct: 111 DVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTS 170
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
L M + NL PNV YN I+ LCK V EA L EM P+ +YN ++
Sbjct: 171 GALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLI 230
Query: 192 AYHCDRAEVNM---ALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEK 247
C EV + L M E ++PD T+++++ + G RA + M +
Sbjct: 231 QGLC--GEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIR 288
Query: 248 RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
G +V TY+ ++ G C + ++EEA + F++MV EG
Sbjct: 289 IGVELNVVTYNSLISGYCLRN-RMEEAVRVFDLMVREG 325
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS+ + L+H CK K V A P V T++ L+ G +VG+ A
Sbjct: 327 GCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAA 386
Query: 64 RKLFDEMLERKCPVDILAHNSL-LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
++LF M ++ V IL ++ L+ + K EA + R M G + D Y+I +
Sbjct: 387 KELFITMKDQG-QVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLD 445
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ ++ ++L + L + +T+N +I+ LC+ +++A +LL +M E G P
Sbjct: 446 GMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPP 505
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++ SYN + + +++ + + + M + D T ++++ L
Sbjct: 506 NKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFL 552
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ Y+I++ G+ +G+L++ARKL +L + +D N +++ +C+ G +D+A +LR
Sbjct: 437 IVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLR 496
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+M+ G P+ SY++F+ DI + L MK + T +IR L NE
Sbjct: 497 KMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSANE 556
Query: 164 KVEEAYQ 170
+ + A+Q
Sbjct: 557 E-DNAFQ 562
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 139/268 (51%), Gaps = 3/268 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P+IY + L+HA K + V+ A + + + P + TY+ L+ G
Sbjct: 191 MVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGL 250
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA + D+M +DI+++NSL+ CK G + EA M E++ A P+ +Y+
Sbjct: 251 HYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD--AIPNHVTYTT 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+AN+ R+ + M L P V TYN I+RKLC + ++ +A +LL EM ER
Sbjct: 309 LIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERK 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + N ++ +C ++N AL+ T+M + + P+ TY ++ + + A
Sbjct: 369 VQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAK 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKK 267
E+ M GF P+ TYS +V CKK
Sbjct: 429 ELLFGMLDAGFSPNYRTYSWIVDSYCKK 456
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 10/329 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI I + L++ CK ++ A + F K + P TY+ L+ G E EA
Sbjct: 265 GINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK-DAIPNHVTYTTLIDGYCKANEFEEAL 323
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L + M+ + ++ +NS+L +C G I +A+ +L EM + D+ + + I+A+
Sbjct: 324 RLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAY 383
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ D++S + M L PN FTY +I CK ++E A +LL M++ G +P+
Sbjct: 384 CKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNY 443
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y+ I+ +C + + L L + + Y +++ L ++ R + A ++
Sbjct: 444 RTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYH 503
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE------MMVDEGIPPYSSTVEMLRN 298
ME +G Y+ + K G A E +M+ I S ++ +N
Sbjct: 504 MEGKGISGDSVIYTSLAFSYW-KSGNTNAASDMLEEMARRRLMITVKIYRCFSALDASQN 562
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQEL 327
++ + + ++E M R+T IQ++
Sbjct: 563 KVSQMFWDHVVE--RGLMSRNTMYKIQQM 589
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 23/318 (7%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS------ 61
S++ ++H L K +H K A Q D A+ E + + LVR + D E++
Sbjct: 77 SLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVR-IHDDPEVNSHVLSW 135
Query: 62 ------------EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
+A ++F++M + A L+ ++ K G + + M G
Sbjct: 136 IVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDG 195
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
P+ + Y+ IHA ++ D+ +L+ M+ +VP++FTYN +I CK EA
Sbjct: 196 VVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEAL 255
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+ D+M G N D SYN+++ C ++ A+R+ + ++ +P+ TY ++
Sbjct: 256 SVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGY 313
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ F+ A + E M +G YP V TY+ ++ LC G++ +A K M + +
Sbjct: 314 CKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLC-SDGRIRDANKLLHEMSERKVQAD 372
Query: 290 SSTVEMLRNRLVGLGFLD 307
S T L N +G L+
Sbjct: 373 SVTCNTLINAYCKIGDLN 390
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 122 ILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGD 181
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L M D+ ++ L+ +CK +D+A+ + EM G P+ +++
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M L+P++ TYN ++ LCK + +A+ L+DEM +G
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKG 301
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+++Y ++ C +++ A RM +EN+ D Y ++ L + GR A
Sbjct: 302 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAE 361
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M G P T +L N
Sbjct: 362 KMLREMLSVGLKPDTGTYTMIINEFC-KKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMN 419
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ ++G++PS+ + L++ + + + + P V TYS+L+ GL
Sbjct: 157 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESX 216
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +LFDEML + + + +L++ CK G +D A + ++M S PD +Y+
Sbjct: 217 MDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNT 276
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C+ D++ ++D M L P+ FTY +I CK ++ A++ MI+
Sbjct: 277 LVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQEN 336
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D+ +Y A+++ C A +++ M + PD TY M++ + G + +
Sbjct: 337 IRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGS 396
Query: 240 EVWESMEKRGFYPSVSTYSVMVHG 263
++ + M++ G P V TY+V+++G
Sbjct: 397 KLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
++E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M+ + P+V+TY+ +I LCK +++A +L DEM+ +G P+
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M + ++PD TYN ++ L + G ++A + + M
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 298 XXKGLKPDKFTYTTLIDGCC-KEGDLDAAFEHRKRMIQENI 337
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 133/317 (41%), Gaps = 27/317 (8%)
Query: 17 LHALCKRKHVKVAHQFFDNAKHEFTPTVK--------------------------TYSIL 50
LH+ C H HQ F AK V +S L
Sbjct: 8 LHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVFSGL 67
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+ + G L +A + + E K V +LE + K G E+ G
Sbjct: 68 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 127
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
+ ++I +H FC+ DI V D++ ++ L P+V +YN ++ + ++E ++
Sbjct: 128 PASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 187
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
L M G PD ++Y+ ++ C + ++ A L M + ++P+ T+ ++
Sbjct: 188 LKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHC 247
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A E+++ M + P + TY+ +V+GLC KKG L +A + M +G+ P
Sbjct: 248 KNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLC-KKGDLNQAHGLIDEMXXKGLKPDK 306
Query: 291 STVEMLRNRLVGLGFLD 307
T L + G LD
Sbjct: 307 FTYTTLIDGCCKEGDLD 323
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 173/359 (48%), Gaps = 28/359 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVG 58
+ F +PS + LLH+L + +++A F K TP + + +IL++GL +G
Sbjct: 155 LPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGIG 214
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L+ A K+ DEM+ D++ + ++L A C G+++ A + ++ + G PDA Y+
Sbjct: 215 DLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYT 274
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I +C + R++D M + PN TY+ +I CK K EA L EM+
Sbjct: 275 VLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREMLGA 334
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++ C + A + +M K++V PD + ++ L + G A
Sbjct: 335 GYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEA 394
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++++ +E RGF PS+ TY+ ++ GLC + G+L+EA + ++ MV+ P + T E L
Sbjct: 395 RKLFDELE-RGFLPSLLTYNSLIIGLC-ENGELQEAGRVWDDMVERRYEPNAMTYEALIK 452
Query: 299 RLVGLG-----------------------FLDIIEILADKMERSTSCTIQELANAMRGK 334
+G + +++ L+ T CTI E A A+RG+
Sbjct: 453 GFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSHDDTVCTIVE-AAALRGQ 510
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 147/308 (47%), Gaps = 9/308 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
+P+ ++ LC + A + + V TY L+RGL D EL A +
Sbjct: 112 RPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALE 171
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L EM +++ ++ LL C++G + + EM +G EPD ++ FI C
Sbjct: 172 LLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLC 231
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ I +V D M + L PNV TYN +I LCK V EA L +EM ++G PD
Sbjct: 232 KKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVV 291
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVM--PDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++A E++ A+ L+ M + + + PD T+N V+ L ++GR +A V E
Sbjct: 292 TYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVRE 351
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG ++ TY+ ++ G + K+ A ++ G+ P S T +L N
Sbjct: 352 MMAERGCMCNLVTYNYLIGGFLRVH-KVNMAMNLMSELISSGLEPDSFTYSILIN----- 405
Query: 304 GFLDIIEI 311
GF + E+
Sbjct: 406 GFSKLWEV 413
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 8/277 (2%)
Query: 16 LLHALCKRK-HVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGELSEARKLFDEM 70
+L ALC+R ++ A + E P + +Y++++RGL EA L M
Sbjct: 82 VLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141
Query: 71 LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDI 130
D++ + +L+ +C A +D A +L EM G P+ YS + +C +
Sbjct: 142 QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRW 201
Query: 131 HSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAI 190
V +V + M R + P+V + I LCK ++ +A ++ D M++RG P+ +YN +
Sbjct: 202 QDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVL 261
Query: 191 LAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
+ C V AL L M + V PD TYN ++ L V D A + E M +
Sbjct: 262 INCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDT 321
Query: 251 Y--PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
P V T++ ++HGLC K G++ +A EMM + G
Sbjct: 322 LVEPDVVTFNSVIHGLC-KIGRMRQAISVREMMAERG 357
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 5/322 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M G++P + + LCK+ + A + D + P V TY++L+ L G
Sbjct: 211 MSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGS 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSY 117
+ EA L +EM ++ D++ +N+L+ + +D A G+L EM EPD ++
Sbjct: 271 VREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTF 330
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IH C+ + V + M + N+ TYN +I + KV A L+ E+I
Sbjct: 331 NSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELIS 390
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G PD ++Y+ ++ EV+ A + MT+ + + Y +L L ++G ++
Sbjct: 391 SGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQ 450
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++ M+ +V+ YS M++G C K G ++ A + + M+DEG+ P + T +L
Sbjct: 451 AMVLFNEMDMNCGLDAVA-YSTMMYGAC-KSGDIKAAKQLLQDMLDEGLAPDAVTYSILI 508
Query: 298 NRLVGLGFLDIIEILADKMERS 319
N LG L+ E + +M S
Sbjct: 509 NMFAKLGDLEEAERVLKQMAAS 530
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 39/301 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G++P++ + L++ LCK V+ A + + P V TY+ L+ GL V E
Sbjct: 246 MVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLE 305
Query: 60 LSEARKLFDEMLERKCPV--DILAHNSLLEAMCKAGNIDEA------------------- 98
+ A L +EM++ V D++ NS++ +CK G + +A
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTY 365
Query: 99 ----HGMLR------------EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
G LR E+ S G EPD+F+YSI I+ F + ++ L +M +
Sbjct: 366 NYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ +F Y ++ LC+ +E+A L +EM + D +Y+ ++ C ++
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKA 484
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A +L+ M E + PD TY++++ + ++G + A V + M GF P V+ + ++
Sbjct: 485 AKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544
Query: 263 G 263
G
Sbjct: 545 G 545
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 2/219 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G ++ + L+ + V +A P TYSIL+ G + E
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A M +R ++ + LL A+C+ G +++A + EM + DA +YS
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYST 471
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++ C++ DI + ++L M L P+ TY+ +I K +EEA ++L +M G
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
PD +++++ + ++N L LI M +NV D
Sbjct: 532 FVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 148/287 (51%), Gaps = 2/287 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D + + P T++ L+ GL +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+M++R C D++ + +++ +CK G+ID A +L +M + + + ++
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + + M+ + PNV TYN +I LC + +A +LL M+E+
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ ++NA++ ++ A +L M + ++ PD TYN+++ R D A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
++++ M + P++ TY+ +++G CK K ++E+ + F M G+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCK-RVEDGVELFREMSQRGL 429
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 151/293 (51%), Gaps = 3/293 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
IK ++ + ++ +LCK +HV+VA F + + P V TY+ L+ L + G S+A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L MLE+K +++ N+L++A K G + EA + EM +PD +Y++ I+ F
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C N + ++ M + +PN+ TYN +I CK ++VE+ +L EM +RG +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y I+ + + A + +M V D TY+++L L G+ D A +++
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEML 296
++K ++ Y+ M+ G+C K GK+ EA F + + + Y++ + L
Sbjct: 494 LQKSEMELNIFIYNTMIEGMC-KAGKVGEAWDLFCSLSIKPDVVTYNTMISGL 545
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI + ++LL A+ K ++ + + + + TYSI + +LS A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ DI+ +SLL C + I +A ++ +M +G +PD F+++ IH
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N ++D M + P++ TY ++ LCK ++ A LL++M +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+N I+ C V +A+ L T M + + P+ TYN ++ L GR+ A+ + +M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ P+V T++ ++ K+GKL EA K E M+ I P + T +L N
Sbjct: 321 EKKINPNVVTFNALIDAFF-KEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D K P++ ++ L+ + + + L ++M D+ ++ + C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EPD + S ++ +C + I ++D M P+ FT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ +I L + K EA L+D+M++RG PD +Y ++ C R ++++AL L+ +M
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + +N ++ L + + A +++ ME +G P+V TY+ +++ LC G+
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC-NYGRW 309
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A + M+++ I P T L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNAL 334
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL L D+ ++ +A LF +M++ + I+ N LL A+ K + + +M+++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G D ++YSIFI+ FC + + VL M + P++ T + ++ C ++++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD +++ ++ + + A+ L+ +M + PD TY V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME +V ++ ++ LCK + +E A F M +GI P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR-HVEVAVDLFTEMETKGIRP 291
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L N L G + D +L++ +E+
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 131/275 (47%), Gaps = 6/275 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P + L++ C + A Q F + P ++TY+ L+ G
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM +R + + + ++++ +AG+ D A + ++M S D +YSI
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C + + + +++ + N+F YN +I +CK KV EA+ L +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---S 530
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +++ C + + A L +M ++ +P+ TYN +++ +R +
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ + M GF ST S++ + L G+L+++
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTNML--HDGRLDKS 623
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P + + L++ CK ++K A F + K PTV TY+IL+ G +G+L A
Sbjct: 365 GLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGA 424
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
R+L +EM E C D+ + L+ C N+ EM S G EPD F+Y+ I A
Sbjct: 425 RRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISA 484
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
I + F++ + M + + TYN +I LCK +++AY L +M+ G D
Sbjct: 485 ELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLD 544
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++ HC+R + A + M + P TY + + R G A +
Sbjct: 545 CVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFR 604
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M + G P+ TY+V++H LC + G+ E A ++F M++ G+ P T +L
Sbjct: 605 KMLEEGVEPNEVTYNVLMHALC-RMGRTESAYQHFHEMLERGLVPNKYTYTLL 656
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
K S + + L+ L R V+ A ++E PTV TY+ L+ GL G A+
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
FDEM + D++ +NSL+ CKAGN+ +A + +++ G P +Y+I I +C
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ R+ + M + +P+V TY ++ C + DEM+ +G PD +
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+YN ++ + A +L M + D TYN+++ L + G A +W M
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
G TY+ ++H C ++G+L EA F+ MV G+ P
Sbjct: 537 VTDGLRLDCVTYTCLIHAHC-ERGRLIEAKNIFDGMVASGLSP 578
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 38/323 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT---PTVKTYSILVRGLGDV 57
M++ G++PSI+ + LL + CK + A + + P TY++++ GL
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279
Query: 58 GELSEARKLFDEM-LERKCPV---------------------------------DILAHN 83
GEL +A +L D M L +K ++ +N
Sbjct: 280 GELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYN 339
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+L++ + K GN + A EMR+ G PD +Y+ I+ +C+A ++ + +KR
Sbjct: 340 TLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
L P V TYN +I C+ +E A +L +EM E PD +Y ++ C + M
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
M + + PD YN + + +G A ++ E M RG TY+V++ G
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDG 519
Query: 264 LCKKKGKLEEACKYFEMMVDEGI 286
LC K G L++A + MV +G+
Sbjct: 520 LC-KTGSLKDAYVLWMKMVTDGL 541
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 143/287 (49%), Gaps = 4/287 (1%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F + A+H P VK + ++R L D + R ++ +ML+ I +N+LL++ CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241
Query: 92 AGNIDEAHGMLREM--RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
AG +D+A +L++M R+ G P+ +Y++ I+ ++ +++D M R + +
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASA 300
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
FTYN +I L + VE+A LL EM G P +YN ++ A
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKG 269
M + ++PD TYN ++ + G +A ++ +++ G P+V TY++++ G C + G
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC-RLG 419
Query: 270 KLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
LE A + E M +E P T +L N + L ++ I D+M
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E P + L++ C +++ + FFD P Y+ + +G
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A +L +EM+ R D + +N L++ +CK G++ +A+ + +M + G D +Y+
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTC 550
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IHA CE + + D M L P+V TY I C+ + AY +M+E G
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEG 610
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E +YN ++ C A + M + ++P+++TY +++ + G + A
Sbjct: 611 VEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAI 670
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
++ M ++G +P T++ + G +G + +A +Y E +V
Sbjct: 671 RLYCEMHQKGIHPDHCTHNALFKGF--GEGHMYDAVQYLENVV 711
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
++L+S+ R + F+ C +K + EM G P N +L
Sbjct: 148 QLLNSLLRMS---TKFSAECQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVL 204
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR--GFYP 252
D A + + + M + V P TYN +L + GR D+A + + ME R G P
Sbjct: 205 RDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLP 264
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ TY+V+++GL +KG+LE+A + ++M
Sbjct: 265 NDVTYNVVINGL-ARKGELEKAAQLVDIM 292
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L M + V P N VL++L R+D V+ M + G PS+ TY+ ++
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238
Query: 264 LCKKKGKLEEACKYFEMMVDE--GIPPYSSTVEMLRNRLVGLGFLDIIEILADKM---ER 318
C K G++++A + M G P T ++ N L G L+ L D M ++
Sbjct: 239 FC-KAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKK 297
Query: 319 STSCTIQELANAMRGKTGFRKSRSEETELESD 350
+++ T L + + K+ + E+E++
Sbjct: 298 ASAFTYNPLITGLLARDFVEKAGALLLEMENE 329
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELS 61
+ G+ P+++ + ++++LCK ++ A F A+ P TY+IL+ G G +L
Sbjct: 358 KLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLD 417
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A F++M+E + ++NS++ CK G + A + +EM G +P +Y+ I
Sbjct: 418 VAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLI 477
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+C+ + F++ M + PN T+ +I LC+ K+ EA +L DEM+E
Sbjct: 478 SGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKIL 537
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+E +YN ++ HC A L+ M K+ + PD +TY ++ L GR A E
Sbjct: 538 PNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEF 597
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+ + Y+ ++ G C K+G+++EA + MV G+
Sbjct: 598 INDLHHKHQRLDELCYTALLQGFC-KEGRIKEALVARQEMVGRGL 641
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
+V G+KP Y ++ LC+ K A + + A+ + + ++ TY++ + GL
Sbjct: 216 LVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKR 275
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ + E+ D++ + +L+ +C+ + M+ EM +G P + S
Sbjct: 276 VWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSG 335
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + I F +L+ + + +VPN+F YN +I LCK K+EEA L M ERG
Sbjct: 336 LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERG 395
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP++ +Y ++ RA++++A +M + + ++YN ++ + G+ A
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ M +G P+V+TY+ ++ G C K G + +A K + M +GI P + T L
Sbjct: 456 LLFKEMVDKGLKPTVATYTSLISGYC-KDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 34/350 (9%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M E G+ P+ L+ +R + VA +F+ + + TV +Y+ ++ G+
Sbjct: 391 MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF EM+++ + + SL+ CK G + +A + EM G P+ +++
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ N + ++ D M ++PN TYN +I C+ A++LLDEMI++G
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y ++A C V+ A I + ++ D Y +L+ + GR A
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCK--------------------------------- 266
+ M RG + +Y+V++ G
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K G L++A +++ +M+ EG P S T L N L G+++ ++L +M
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 148/303 (48%), Gaps = 2/303 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELS 61
E G+K + L+ LC+ + +V + D + + P+ S L+ GL +G +
Sbjct: 288 EKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIE 347
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A +L +++ + ++ +NS++ ++CK G ++EA + M G P+ +Y+I I
Sbjct: 348 GAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILI 407
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
F + F + M + V++YN +I CK K++ A L EM+++G
Sbjct: 408 DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLK 467
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y ++++ +C V A +L MT + + P+ T+ ++ L ++ + A+++
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
++ M + P+ TY+V++ G C ++G A + + M+ +G+ P + T L L
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHC-REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586
Query: 302 GLG 304
G
Sbjct: 587 STG 589
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 37/323 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE I P+ + L+ C+ + A + D K +P TY L+ GL G
Sbjct: 531 MVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA--------------------- 98
+SEA++ +++ + +D L + +LL+ CK G I EA
Sbjct: 591 VSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAV 650
Query: 99 -------------HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+LREM G +PD Y+I I F ++ ++ F M
Sbjct: 651 LISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY 710
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
VPN TY ++ L K V EA L M+ A P+ +Y L + + AL+
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L M + + + TYN++++ ++G+F A ++ + M G P TYS ++ C
Sbjct: 771 LHNAMLQGS-FANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYC 829
Query: 266 KKKGKLEEACKYFEMMVDEGIPP 288
K+G ++ A +E M+ G+ P
Sbjct: 830 -KRGNVDAAMDMWECMLQRGLKP 851
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M ++G+ P + L LL+AL + + + + FD P Y+++V+ L ++ +
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A+++ ++ C + I+ +N + +CK+ + EA + R + G + D +Y
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + ++D M VP+ + +I L K +E A++LL+++ + G
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ + YN+++ C ++ A L + M + + P+ TY +++ R + D A
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ M + G +V +Y+ M++ C K GK++ A F+ MVD+G+ P +T
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQC-KFGKMKMAELLFKEMVDKGLKPTVAT 472
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 135/275 (49%), Gaps = 1/275 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P V+T S L+ L + + + +LFD ++ D + +++ +C+ + ++A +
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ + G +Y++FI+ C++ + V S+ L ++ TY ++ LC+
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++ E +++DEMIE G P E + + ++ + A L+ ++ K V+P+
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + G+ + A ++ M +RG P+ TY++++ G ++ KL+ A YF M
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF-GRRAKLDVAFYYFNKM 426
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
++ GI + + N G + + E+L +M
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEM 461
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 2/222 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P Y+IL+ G G L +A + + M+ + + + +L+ + KAG ++EA +
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ M A P+ +Y F+ + ++ + ++ ++M + + N TYN +IR C+
Sbjct: 737 FKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILIRGYCQ 795
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
K +EA +LLD MI G PD +Y+ + +C R V+ A+ + M + + PDR
Sbjct: 796 IGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVV 855
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY-SVMVH 262
+N ++ G DRA ++ M RG P+ STY S+MV
Sbjct: 856 FNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQ 897
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 5/238 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G++P L+ K ++K A +F+ E + P TY+ LV GL G ++EA
Sbjct: 674 GMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEA 733
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ LF ML + + + + L+ + K GN++ A + M G+ + +Y+I I
Sbjct: 734 KLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRG 792
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+ ++LD M +VP+ TY+ I + CK V+ A + + M++RG PD
Sbjct: 793 YCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPD 852
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+N ++ C E++ AL+L M + P + TY+ L+V++ + R T+V
Sbjct: 853 RVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYH---SLMVQLAQRARLTQV 907
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
+ + I + + + V++ M+ Y L+P V T + ++ L + K + +L D +
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+ G PD + Y ++ C+ + N A +I + TYN+ + L + R
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEM 295
A EV S+ ++G + TY +V GLC+ + + E + + M++ G P + V
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQ-EFEVGMEMMDEMIELGYVPSEAAVSG 335
Query: 296 LRNRLVGLGFLD 307
L L+ +G ++
Sbjct: 336 LIEGLIKMGSIE 347
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G PS + + L L K ++ FF V ++ I ++ + G +
Sbjct: 64 MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNV 123
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
S+ +L +M ++ + L+EA C+ G+ID+A M M +G + + Y+I
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIM 183
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ F + F + MK ++PN++TYN +I + C++ K+ A+++ DE+ +RG
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGV 243
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ +YN ++ C + +V+ A L+ RM + ++ P T+NM++ L G+ D+A
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
E ++ G P++ TY++++ G K G + M D GI P T +L N
Sbjct: 304 YLEKLKLIGLCPTLVTYNILISGF-SKVGNSSVVSELVREMEDRGISPSKVTYTILMNTF 362
Query: 301 V 301
V
Sbjct: 363 V 363
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G+ + Y +++ K+ + K + + K P + TY+ L+ G+
Sbjct: 168 MDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGK 227
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
LS A K+FDE+ +R + + +N L+ +C+ G + +A G+L M+ P ++++
Sbjct: 228 LSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNM 287
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + L+ +K L P + TYN +I K +L+ EM +RG
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG 347
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P + +Y ++ ++ A + M + ++PD+HTY +++ L G A+
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEM 295
++++SM + P+ Y+ M++G CK+ +A K+ E MV G+ P Y ST+++
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSY-KALKFLEEMVKNGVTPNVASYISTIQI 466
Query: 296 L 296
L
Sbjct: 467 L 467
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEA 63
G+ + + L+ LC++ V A + K PT +T+++L+ GL + G+L +A
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKA 301
Query: 64 RKLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
+++ L CP ++ +N L+ K GN ++REM G P +Y+I ++
Sbjct: 302 LSYLEKLKLIGLCPT-LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
F ++DI + + MKR LVP+ TY +I LC + EA +L M+E P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ YN ++ +C AL+ + M K V P+ +Y +++L + G+ A +
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ M + G P S LC K G+
Sbjct: 481 KEMTEAGLKPPES--------LCSKVGQ 500
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+ P++Y + L+ C+ + +A + FD +K TY+IL+ GL G++S+A
Sbjct: 207 GVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKA 266
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L + M N L++ +C G +D+A L +++ IG P +Y+I I
Sbjct: 267 EGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISG 326
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F + + V ++ M+ + P+ TY ++ +++ +E+AY++ M G PD
Sbjct: 327 FSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPD 386
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ +Y ++ C + + A +L M + ++ P+ YN ++ + +A + E
Sbjct: 387 QHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLE 446
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M K G P+V++Y + LC K GK EA + + M + G+ P
Sbjct: 447 EMVKNGVTPNVASYISTIQILC-KDGKSIEAKRLLKEMTEAGLKP 490
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 136/277 (49%), Gaps = 2/277 (0%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHG 100
+P+ +++ + L G L F E L R D+ + ++A C+ GN+ +
Sbjct: 70 SPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFWITIKAFCENGNVSKGFE 128
Query: 101 MLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLC 160
+L +M ++G P+ F Y+I I A C DI + M L N + Y +I
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188
Query: 161 KNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
K ++ ++L +M G P+ ++YN+++ +C ++++A ++ ++K V +
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TYN+++ L R G+ +A + E M++ P+ T+++++ GLC G+L++A Y E
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNT-GQLDKALSYLEK 307
Query: 281 MVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
+ G+ P T +L + +G ++ L +ME
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344
>gi|357483069|ref|XP_003611821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513156|gb|AES94779.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 6/279 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ ++P+ Y + L+ CKR VK A + D K P V + + ++ G
Sbjct: 145 MLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANN 204
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF++M E P D+++ N +L CK G ++EA + +++ G + SY+
Sbjct: 205 VDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYAS 264
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+AF +A M + +VP+V Y +IR L K +V EA ++L+EM + G
Sbjct: 265 LINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + YNA++ CD +N A L +++ NV T+ +++ + + G A
Sbjct: 325 LTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVC----THTILICEMCKRGMVAEAQ 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
E++ MEK G PSV T++ +++GLCK K LE+A F
Sbjct: 381 ELFNQMEKLGCEPSVVTFNTLINGLCKAKN-LEKAKNLF 418
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
LVR +G +A + F M E D +N++L + ++ A + M
Sbjct: 90 LVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSN 149
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
EP+ ++Y++ I FC+ ++ +LD MKR +VP V + I+ C+ V+EA+
Sbjct: 150 VEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAH 209
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L ++M E PD S N +L C + AL + + + +R++Y ++
Sbjct: 210 KLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAF 269
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ R+ A + M K G P V Y++M+ GL K+G++ EA K E M G+ P
Sbjct: 270 FKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGL-SKEGRVGEAAKMLEEMTQIGLTPD 328
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
S + L + L+ + L+ ++ CT
Sbjct: 329 SYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCT 362
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 47/298 (15%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM---- 70
L++A K + + AH + K P V Y+I++RGL G + EA K+ +EM
Sbjct: 265 LINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 71 -----------LERKCPVDIL----------------AHNSLLEAMCKAGNIDEAHGMLR 103
++ C VD+L H L+ MCK G + EA +
Sbjct: 325 LTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCKRGMVAEAQELFN 384
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIH---SVFRVLDSMKRYNLVPNVFTYNCII---- 156
+M +G EP +++ I+ C+A ++ ++F L+ +R++L ++ + +
Sbjct: 385 QMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSA 444
Query: 157 ------RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+++C+ ++ AY+L+ ++ PD +YN +L C EVN A +
Sbjct: 445 RLLKKAKEMCEAGQILRAYKLITDLAGE-VKPDIITYNILLNALCMDREVNAAYNFFEFL 503
Query: 211 TKENV-MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
K+ PD TY ++K L V R D A +V++ M+K G P++S Y ++ LC+K
Sbjct: 504 QKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRK 561
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P Y+ ++R + + L A L+ ML+ + +N L++ CK G + A M
Sbjct: 117 PDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEM 176
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM+ +G P S + ++ C+AN++ ++ + MK + P++ + N ++ CK
Sbjct: 177 LDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCK 236
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++EEA + + G + + SY +++ A T+M KE ++PD
Sbjct: 237 MGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVL 296
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
Y ++++ L + GR A ++ E M + G P Y+ ++ GLC
Sbjct: 297 YAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLC 340
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 141/326 (43%), Gaps = 61/326 (18%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G+ P Y + ++ LC + A + ++H V T++IL+ + G
Sbjct: 320 MTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEH----NVCTHTILICEMCKRGM 375
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML----------------- 102
++EA++LF++M + C ++ N+L+ +CKA N+++A +
Sbjct: 376 VAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQ 435
Query: 103 ---------------REMRSIG---------------AEPDAFSYSIFIHAFCEANDIHS 132
+EM G +PD +Y+I ++A C ++++
Sbjct: 436 GSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCMDREVNA 495
Query: 133 VFRVLDSMKRYNL-VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ + +++ P+ TY II+ L ++ +EA+++ M + G+ P Y ++
Sbjct: 496 AYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLM 555
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
C +++V+ A L K +P R N + L + ++ +V + + F
Sbjct: 556 TCLCRKSKVSRAFTLYLEHLKS--LPSRD--NDSISTLEKYLFGEKLEQVIRGLLELDFK 611
Query: 252 P---SVSTYSVMVHGLCKKKGKLEEA 274
++ Y++++ G C + GK+ EA
Sbjct: 612 ARDFKLAPYTILLIGFC-QAGKVSEA 636
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVF-RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
++ EP I H + +S++ L+ +K+ ++ + ++R
Sbjct: 46 NLSYEPYCLVNRIIFH-----KNWYSIYWEALELLKKNGVLVTSDSVRALVRSYSHMGYT 100
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E+A + M E G PD YN IL + + +AL L T M K NV P+ +TYNM+
Sbjct: 101 EKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNML 160
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + G A E+ + M++ G P V + + +++G C + ++EA K F M +
Sbjct: 161 IDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCC-QANNVDEAHKLFNDMKETS 219
Query: 286 IPPYSSTVEMLRNRLVGLGFLD 307
PP + ++ N +G L+
Sbjct: 220 YPPDMISCNVVLNGFCKMGRLE 241
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVGELSEA 63
+KP I + LL+ALC + V A+ FF+ K +P TY +++GL V EA
Sbjct: 473 VKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEA 532
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGA-EPDAFS----- 116
K+F M + + + +L+ +C+ + A + L ++S+ + + D+ S
Sbjct: 533 FKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEKY 592
Query: 117 ---------------------------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
Y+I + FC+A + +L + +N+ N
Sbjct: 593 LFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINA 652
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +IR LCK +++ +A ++ +E+G
Sbjct: 653 TSCVHLIRGLCKEQRLHDAVKIFLYSLEKG 682
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 4/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MVE G +P + L++ LC V A D E + Y ++ GL +G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH---QPYGTIINGLCKMGDT 57
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A L +M E ++ +N++++ +CK G+ A + EM G PD +YS
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +FC + ++L M + P+V T++ +I L K KV EA ++ +M+ RG
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +YN+++ C + +N A R++ M ++ PD T++ ++ + R D E
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ M +RG + TY+ ++HG C + G L+ A +M+ G+ P
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDLLNVMISSGVAP 284
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P + ++ + C+ A Q D + + P V T+S L+ L G++SEA
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+++ +ML R + +NS+++ CK +++A ML M S PD ++S I+
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + + + M R +V N TY +I C+ ++ A LL+ MI G P+
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMP 217
++ ++LA C + E+ A ++ + K V P
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDLQKSEVCP 319
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E IK + + ++ LCK H A F + P V TYS ++ G
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +L +M+ER+ D++ ++L+ A+ K G + EA + +M G P +Y+
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ + ++ R+LDSM + P+V T++ +I CK ++V+ ++ EM RG
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y ++ C +++ A L+ M V P+ T+ +L L +A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 240 EVWESMEKRGFYPSV 254
+ E ++K P +
Sbjct: 307 AILEDLQKSEVCPRI 321
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 151/296 (51%), Gaps = 7/296 (2%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLF 67
S Y + ++H C V A + F K + P V +YSILV GL G+L + +
Sbjct: 936 SNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDML 995
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA 127
+EM + ++++SLL +CK G + A + + ++ G E D +YSI +H C+
Sbjct: 996 EEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQH 1055
Query: 128 NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSY 187
D+ ++ + M +N+ P+V+ Y +I LC++ +++A + + M+E G +P+ +
Sbjct: 1056 LDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTC 1115
Query: 188 NAILAYHCDRAEVNMALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
++ + V A + RM + ++P+ Y +++ L + ++ V+ M
Sbjct: 1116 TILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMI 1175
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
KRG+ P V YS+++ G K KL+EA + + M+DEG+ P YSS + L N
Sbjct: 1176 KRGYVPDVVLYSIIIEGFVKAL-KLQEALRLYHKMLDEGVKPNIFTYSSLINGLCN 1230
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGL--GDVGELSEARKLFDEMLE 72
LL L + + A FD+ K +P V +YSIL+ G+ L EA +L EM
Sbjct: 836 LLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMES 895
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ + + L +C++ + A L+ + G + ++ IH FC +
Sbjct: 896 NGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDK 955
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
V MK+ VP+V +Y+ ++ LCK + + Y +L+EM G P++ SY+++L
Sbjct: 956 AIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLH 1015
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C +V +AL++ + D+ Y+++L + +++W M P
Sbjct: 1016 GLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAP 1075
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEIL 312
V Y+ +++ LC+ + L++A FE+M++ G+ P T +L + G + +
Sbjct: 1076 DVYNYTSLIYALCRHR-NLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLF 1134
Query: 313 ADKMERS 319
D+M +S
Sbjct: 1135 LDRMHQS 1141
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M GI P+ LLH LCK V +A + F N + H F YSI++ G +
Sbjct: 998 MARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLD 1057
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L L+ +M+ D+ + SL+ A+C+ N+ +A G+ M G P+ + +I
Sbjct: 1058 LKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTI 1117
Query: 120 FIHAFCEANDIHSVFRVLDSM-KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ +F + + F LD M + +VPN+ Y +I LCK K + + +MI+R
Sbjct: 1118 LVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKR 1177
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD Y+ I+ ++ ALRL +M E V P+ TY+ ++ L R A
Sbjct: 1178 GYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEA 1237
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ M Y+ ++ C++
Sbjct: 1238 MGLIRDMIGEDLLLDNVLYTSIIACYCRR 1266
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P TY + GL +++ A + + P N+++ C G +D+A +
Sbjct: 900 PNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEV 959
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
M+ G PD SYSI + C+ D+ + +L+ M R + PN +Y+ ++ LCK
Sbjct: 960 FHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCK 1019
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+V A ++ + + G D+ +Y+ IL C ++ L M N+ PD +
Sbjct: 1020 TGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYN 1079
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++ L R A V+E M + G P++ T +++V K+G + EA + + M
Sbjct: 1080 YTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSF-SKQGLVGEAFLFLDRM 1138
Query: 282 VDE-GIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
GI P ++ N L + + + AD ++R
Sbjct: 1139 HQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRG 1178
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%), Gaps = 3/205 (1%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC--EANDIHSVFRVLDSM 140
N LL+ + + I A + +M+S G P+ SYSI + + E + + F +L M
Sbjct: 834 NFLLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEM 893
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+ + PN TY + LC++ +V A+ L + + G + +NA++ C +V
Sbjct: 894 ESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQV 953
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A+ + M K +PD H+Y++++ L + G + ++ E M + G P+ +YS +
Sbjct: 954 DKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSL 1013
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEG 285
+HGLC K G++ A K F+ + D G
Sbjct: 1014 LHGLC-KTGQVALALKIFKNLQDHG 1037
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ I P +Y+ L++ALC+ ++++ A F+ ++ +P + T +ILV G
Sbjct: 1068 MIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGL 1127
Query: 60 LSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA D M + V ++ + ++ +CK + +M G PD YS
Sbjct: 1128 VGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYS 1187
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I F +A + R+ M + PN+FTY+ +I LC ++++ EA L+ +MI
Sbjct: 1188 IIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGE 1247
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
D Y +I+A +C R + A+ + R K+
Sbjct: 1248 DLLLDNVLYTSIIACYCRRLNMKAAMEMAQRDGKK 1282
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV---- 261
L+T + +N+ DR N +LK LV + A +++ M+ G P+V +YS+++
Sbjct: 817 LLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYT 876
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
HG ++ LEEA + M G+ P ++T
Sbjct: 877 HG---ERSCLEEAFELLCEMESNGVRPNATT 904
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 152/289 (52%), Gaps = 1/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + GI+P + + L+ L V+ + D + +P V T+S L+ G G+
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+K ++EM++R +I+ +NSL+ +C G +DEA +L + S G P+A +Y+
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ +C+A + ++L M R + + FTYN + + C+ K A ++L M+ G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +++N +L CD ++ AL + + K + TYN+++K L + + + A
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ S+ +G P V TY M+ GL +K+ E Y +M ++G+ P
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI L++ C A D + P V Y+ ++ L + G+
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ A + M + D++ +NSL+ + +G + +L +M +G PD ++S
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + M + ++ PN+ TYN +I LC + ++EA ++L+ ++ +G
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ +C V+ ++++ M+++ V D TYN + + + G+F A
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+V M G +P + T+++++ GLC GK+ +A
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLC-DHGKIGKA 413
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 1/267 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D A+ P++ +S L+ + + + LF + D+ + +L++ C+
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A L +M +G EP ++ ++ FC N + ++D + PNV
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN II LC+ +V A +L M + G PD +YN+++ ++ R+++ M
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + PD T++ ++ + + G+ A + + M +R P++ TY+ +++GLC G L
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC-IHGLL 305
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRN 298
+EA K ++V +G P + T L N
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLIN 332
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL A+ K + F + + + + +++ L+ LS A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SL+ C EA ++ ++ +G EP+ Y+ I + CE
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ VL MK+ + P+V TYN +I +L + + ++L +M+ G +PD +
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
++A++ + ++ A + M + +V P+ TYN ++ L G D A +V +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+GF+P+ TY+ +++G CK K ++++ K +M +G+
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAK-RVDDGMKILCVMSRDGV 355
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 5/276 (1%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ ++A LF +M E I+ + LL A+ K + + R + +G D +S++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC + L M + P++ T+ ++ C + EA L+D+++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ YN I+ C++ +VN AL ++ M K + PD TYN ++ L G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M + G P V T+S ++ + K+G+L EA K + M+ + P T L N
Sbjct: 239 ARILSDMMRMGISPDVITFSALID-VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 299 RLVGLGFLD----IIEILADKMERSTSCTIQELANA 330
L G LD ++ +L K + T L N
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 38/366 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P+ + L+ C+R V + + PTV TY L+ LG G+L +
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKI 348
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L EM ER+ P ++ +NS+++A+CK + +A +L++M + G +PDA ++S I
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISG 408
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ + R+L R+ L PN+ +Y +I C +V A LL EM+ERG PD
Sbjct: 409 LCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPD 468
Query: 184 EWS-----------------------------------YNAILAYHCDRAEVNMALRLIT 208
+ YN +++ C + + A LI
Sbjct: 469 VVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIE 528
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M ++NV PD++ Y ++ +R D A +++E ME++G +P V Y+ M+ G C +
Sbjct: 529 EMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYC-QF 587
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKMERSTSCTIQEL 327
G + EA + M G P T L G + + +L D M+R +
Sbjct: 588 GMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAY 647
Query: 328 ANAMRG 333
++ + G
Sbjct: 648 SSLING 653
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
+ P++ L+H C R V VA + + TP V T+ L+ GL G++SEA
Sbjct: 430 LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+ ++M R+ D +N L+ +CK + A ++ EM PD + Y+ I F
Sbjct: 490 LVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGF 549
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ ++ + M++ + P+V YN +I+ C+ + EA + + M + G PDE
Sbjct: 550 IRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDE 609
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++Y ++ + + ++ AL L+ M K P+ Y+ ++ ++G D A ++ S
Sbjct: 610 FTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGS 669
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
ME +G +P+V TY++++ L KK K+ A YFE M+ P T+ L
Sbjct: 670 MESQGLFPNVITYTILIGSLFKKD-KVVRAAMYFEYMLLNQCSPNDYTLHSL 720
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M G P L+ LC+ V+ A + + + E P + +Y+ L+ G GE
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L EM+ER D++ +L+ + AG + EA + +M + PDA Y++
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + +++ M N+ P+ + Y +I +NE ++EA ++ + M ++G
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD YNA++ +C +N A+ ++ M K +PD TY ++ + G A
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M KR P+V YS +++G C K G + A F M +G+ P T +L
Sbjct: 630 SLLCDMMKRRCQPNVVAYSSLINGYC-KLGDTDAAECLFGSMESQGLFPNVITYTILIGS 688
Query: 300 L 300
L
Sbjct: 689 L 689
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 1/272 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P + L+H L V A + A + P Y++L+ GL
Sbjct: 460 MMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKM 519
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L AR L +EMLE+ D + +L++ + ++DEA + M G PD Y+
Sbjct: 520 LPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNA 579
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ ++ + +M++ +P+ FTY +I K + A LL +M++R
Sbjct: 580 MIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRR 639
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y++++ +C + + A L M + + P+ TY +++ L + + RA
Sbjct: 640 CQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAA 699
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+E M P+ T +V GLC +
Sbjct: 700 MYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ARKL+DEML + D + ++ +C G +++ ++ G P+A Y++ I
Sbjct: 242 DARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLI 301
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+C D+ +L M+ L+P V TY ++ L + +E+ LL EM ER
Sbjct: 302 DGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLP 361
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ YN+++ C + AL ++ +M PD T++ ++ L + GR A +
Sbjct: 362 PNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERL 421
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ P++S+Y+ ++HG C +G++ A M++ G P T L + LV
Sbjct: 422 LRETTRWELNPNLSSYTSLIHGFC-VRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480
Query: 302 GLGFLDIIEILADKM 316
G + ++ +KM
Sbjct: 481 VAGQVSEALLVREKM 495
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 55/310 (17%)
Query: 9 SIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLF 67
+IY++ L+ LCK+K + A + + P Y+ L+ G L EARK+F
Sbjct: 505 NIYNV--LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF 562
Query: 68 DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY---------- 117
+ M ++ D++ +N++++ C+ G ++EA + MR +G PD F+Y
Sbjct: 563 EFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQ 622
Query: 118 -------------------------SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
S I+ +C+ D + + SM+ L PNV TY
Sbjct: 623 GNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITY 682
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW-----------SYNAILAYHCDRAEVN 201
+I L K +KV A + M+ +P+++ S +I++ HC + VN
Sbjct: 683 TILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCS-STVN 741
Query: 202 M-----ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ L + + + P YN ++ L A ++ M +G+ P +T
Sbjct: 742 LHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSAT 801
Query: 257 YSVMVHGLCK 266
+ +++G C
Sbjct: 802 FLSLLYGFCS 811
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 16/250 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M + GI P + + ++ C+ + A + K P TY+ L+ G G
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A L +M++R+C +++A++SL+ CK G+ D A + M S G P+ +Y+I
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE------------KVEE 167
I + + + + + M PN +T + ++ LC + +
Sbjct: 685 LIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHG 744
Query: 168 AYQLLD---EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNM 224
LLD ++ +P +YNAI+ C + AL L +M + PD T+
Sbjct: 745 KGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLS 804
Query: 225 VLKLLVRVGR 234
+L VG+
Sbjct: 805 LLYGFCSVGK 814
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHAFCEAN-DIHSVFRVL 137
H++LL + +AG D LR+M GA P + + +A + +
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ + + +P N ++R L + + ++A +L DEM+ + D++S ++ C
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
V L+LI +P+ YN+++ R G R + ME +G P+V TY
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
++ L +KG LE+ M + +PP Y+S ++ L
Sbjct: 333 GTLMSWL-GRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDAL 374
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 37/317 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M +F KP ++ + +LH + +++ V +A ++ K P + T+SIL+ G+ G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A ++FDEM +R+ + + + ++ +C+A D A+ + M+ G PD+ +Y+
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 120 FIHAFCEANDIHSVFRVLD-----------------------------------SMKRYN 144
+H FC+ + +L M +N
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ P+V Y +++ L K K ++A +LL+EM ERG PD YNA++ +CD ++ A
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L ++K + TY +++ + R G A +++ MEK G YPSV T++ ++ G
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451
Query: 265 CKKKGKLEEACKYFEMM 281
C K G +E+A F M
Sbjct: 452 C-KAGNIEKAQLLFYKM 467
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 5/296 (1%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F+ + +++L++ + + +A + F+ M + C D+ +N++L M + + A
Sbjct: 122 FSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLAL 181
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G+ M + P+ ++SI I C++ + ++ D M + ++PN TY II L
Sbjct: 182 GIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGL 241
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
C+ +K + AY+L M + G PD +YNA+L C V+ AL L+ K+ + D+
Sbjct: 242 CQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDK 301
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
Y+ ++ L R RF+ A + M + P V Y++M+ GL K GK ++A +
Sbjct: 302 QGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGL-SKAGKFKDALRLLN 360
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER----STSCTIQELANAM 331
M + G+ P + L LG LD + L ++ + S++CT L M
Sbjct: 361 EMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGM 416
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 157/313 (50%), Gaps = 28/313 (8%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ +C+ V A Q F+ KH P+V T++ L+ G G + +A+ LF +M +
Sbjct: 412 LICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGR 471
Query: 75 CP-------------VDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
P +D + +++E +C +G I +A+ +L ++ G P+ +Y+I I
Sbjct: 472 NPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILI 531
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H FC+A +I+ F++ ++ L P+ TY +I L + E+A+ +LD++++ G
Sbjct: 532 HGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCT 591
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL---VRVGRFDRA 238
P Y + + + C R ++ +A L + + +P R + VLK + G + A
Sbjct: 592 PITEVYKSFMTWSCRRNKITLAFSLWLKYLRS--IPGRDSE--VLKSVEENFEKGEVEEA 647
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI---PPYSSTVEM 295
M+ + ++ Y++ + GLC + G+LEEA K F + + + PP S V++
Sbjct: 648 VRGLLEMDFKLNDFQLAPYTIWLIGLC-QAGRLEEALKIFFTLEEHNVLVTPP--SCVKL 704
Query: 296 LRNRLVGLGFLDI 308
+ RL+ +G LD+
Sbjct: 705 IY-RLLKVGNLDL 716
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 109/203 (53%), Gaps = 4/203 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
++HN +++ + K + +L+E++ G A ++++ I A+ + + I +
Sbjct: 92 VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151
Query: 140 MKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAE 199
MK ++ P+VFTYN ++ + + E V A + + M++ P+ +++ ++ C +
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 200 VNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSV 259
AL++ MT+ ++P++ TY +++ L + + D A ++ +M+ G P TY+
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 260 MVHGLCKKKGKLEEA---CKYFE 279
++HG C K G+++EA KYFE
Sbjct: 272 LLHGFC-KLGRVDEALGLLKYFE 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 115/298 (38%), Gaps = 48/298 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV--------------KT 46
M + G PS+ + L+ CK +++ A F + P++ +
Sbjct: 432 MEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTAS 491
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
+V L D G + +A + ++ + +I+ +N L+ CKAGNI+ A + +E++
Sbjct: 492 LQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G PD+ +Y I+ AN F VLD + + P Y + C+ K+
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKIT 611
Query: 167 EAYQL------------------LDEMIERGANPDE----------------WSYNAILA 192
A+ L ++E E+G + Y L
Sbjct: 612 LAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLI 671
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGF 250
C + AL++ + + NV+ + ++ L++VG D A E++ +G+
Sbjct: 672 GLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGY 729
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
E+S A+ + + VD N +L + I+ A E + P +Y
Sbjct: 10 EISRAKPPWKQHFHTYSAVDFAISNEVLTIIDSVNPIEPA----LESKVPFLSPSIVTYI 65
Query: 119 IFIHAFCEANDIHSV--FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
I N +S+ FR ++ + + ++N II L K+ E +Q+L E+
Sbjct: 66 I-------KNPPNSLLGFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIK 118
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
G + ++ ++ + + A+ M + PD TYN VL ++VR
Sbjct: 119 RCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVL 178
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++ M K P+++T+S+++ G+C K GK + A + F+ M I P T ++
Sbjct: 179 LALGIYNRMLKLNCLPNIATFSILIDGMC-KSGKTQNALQMFDEMTQRRILPNKITYTII 237
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 13/257 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ + G P+I + L+H CK ++ A + F + + +P TY L+ GL
Sbjct: 515 LTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANR 574
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYS 118
+A + D++L+ C + S + C+ I A + L+ +RSI S
Sbjct: 575 EEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKS 634
Query: 119 IFIHAFCEANDIHSVFRVLDSM----KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
+ E ++ R L M + L P Y + LC+ ++EEA ++
Sbjct: 635 --VEENFEKGEVEEAVRGLLEMDFKLNDFQLAP----YTIWLIGLCQAGRLEEALKIFFT 688
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV-G 233
+ E S ++ +++A + + M N +LK L+R
Sbjct: 689 LEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSED 748
Query: 234 RFDRATEVWESMEKRGF 250
+ +RA ++ M+ G+
Sbjct: 749 KRNRAFDLLSRMKSLGY 765
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 6/291 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M+E G+ +I + L+H LC+ K++K A + N E TY+I+++G
Sbjct: 468 MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI--TYNIMIQGCCKD 525
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
++ EA KL D+M+ + D NS++ A C G ++EA +L +M+ G +PD SY
Sbjct: 526 SKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSY 585
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I +C+A DI L+ + L PN YN +I +N + A +LD M
Sbjct: 586 GTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMES 645
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G P +Y +++ + C V+ A + + K ++ Y ++++ L ++G+ D
Sbjct: 646 IGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDE 705
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A +E M R P+ TY+ +++ C K G EEA K F+ MV GI P
Sbjct: 706 AMNYFEEMRSRSIPPNKITYTTLMYAYC-KSGNNEEASKLFDEMVSSGIVP 755
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 38/344 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M GI P+ ++L+ C++ H A + FD E T TY+++ R L GE
Sbjct: 327 MEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGE 386
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMC-KAGNIDEAHGMLREMRSIGAEP-DAF-- 115
+ A ++ +EML + NS++ + + G ++ ++ EM G +P DA
Sbjct: 387 MERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMT 446
Query: 116 --------------------------------SYSIFIHAFCEANDIHSVFRVLDSMKRY 143
+ + IH CE ++ VL +M
Sbjct: 447 ACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNK 506
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMA 203
+ + TYN +I+ CK+ K+EEA +L D+MI +G PD + +N+I+ +CD ++ A
Sbjct: 507 GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEA 566
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
L L+ +M E V PD +Y ++ + +A E + G P+ Y+ ++ G
Sbjct: 567 LHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGG 626
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+ G + A + M GI P + T L + + G +D
Sbjct: 627 Y-GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVD 669
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 41 TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV---DILAHNSLLEAMCKAGNIDE 97
+P+VKT + L+ L G L K+FDEM R C + ++ S+++A+CK G +D+
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEM--RDCKTVTPNGYSYTSMIKALCKVGKVDD 247
Query: 98 AHGMLREMRSIGAE--PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+L ++ G + A Y++ + A C++ + R+ M+ + P++ T+ +
Sbjct: 248 GFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGIL 307
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I L ++++ E LL EM G P+E N ++ +HC + A+RL M + +
Sbjct: 308 INGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEM 367
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
TYN++ + L + G +RA + E M G ++ +V GL ++ G+LE
Sbjct: 368 KSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVV 427
Query: 276 KYFEMMVDEGIPP 288
+ MV G+ P
Sbjct: 428 RLISEMVKRGMKP 440
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 36/270 (13%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
EA ++ +MLE+ ++I N+L+ +C+ N+ A +LR M + G E D +Y+I I
Sbjct: 460 EAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMI 519
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + I ++ D M R P+ + +N II C K+EEA LL +M G
Sbjct: 520 QGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQ 579
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD SY I+ +C ++ A + + + P+ YN ++ R G A V
Sbjct: 580 PDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGV 639
Query: 242 WESMEKRGFYPS-----------------------------------VSTYSVMVHGLCK 266
++ME G P+ V Y++M+ GLC
Sbjct: 640 LDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLC- 698
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
K GK++EA YFE M IPP T L
Sbjct: 699 KIGKMDEAMNYFEEMRSRSIPPNKITYTTL 728
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 41/319 (12%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK--HEFTPTVKTYSILVRGLGDVGELSEARK 65
PS+ + LL AL + ++ + FD + TP +Y+ +++ L VG++ + K
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFK 250
Query: 66 LFDEMLER--KCPVDILAHNSLLEAMCKAGNIDEA------------------------- 98
+ +++ + + +N L++A+CK+G +DEA
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILING 310
Query: 99 ----------HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+LREM +G P+ + I C R+ D M +
Sbjct: 311 LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKST 370
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR-AEVNMALRLI 207
TYN I R LCK ++E A ++L+EM+ G +N+++A R + +RLI
Sbjct: 371 AVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLI 430
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+ M K + P+ K L + R A +W M ++G +++T + ++HGLC+
Sbjct: 431 SEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEG 490
Query: 268 KGKLEEACKYFEMMVDEGI 286
K ++ A + MV++G+
Sbjct: 491 K-NMKGATEVLRTMVNKGM 508
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHEFTPTVK-TYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + A +F+ + P K TY+ L+ G EA KLFDEM+
Sbjct: 693 MIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSG 752
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAF 115
D +++N+L+ + ++D+A E+ SI + D
Sbjct: 753 IVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCL 793
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 162/322 (50%), Gaps = 8/322 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
V P L+ LL A CK V+ A F K + +TY+IL G +
Sbjct: 206 VRMRTPPETDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAETYNILFFGWCRARDPK 265
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYS 118
+A K+ +EM+ K + + + +++ C AG + EA + MR+ G+ P A +YS
Sbjct: 266 KAMKVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYS 325
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I A +A+ + F ++ M + +P+V T+ +I +C +K++ AY +L+EM +
Sbjct: 326 VMIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKA 385
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C+ + + AL+L RM + + P HTYNM++ + ++ RA
Sbjct: 386 GFPPDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRA 445
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++W M+KRG +V TY +M+ GL C G+ E+A + +++ + + +
Sbjct: 446 LDIWLEMDKRGCRRAVDTYEIMIDGLFDC---GRTEDATNLLDEVINHDMKLSYKKFDAI 502
Query: 297 RNRLVGLGFLDIIEILADKMER 318
+L +G L I L++ M +
Sbjct: 503 MLQLSAVGNLGAIHRLSEHMRK 524
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 17/294 (5%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILV-------RGLGDVGELSEARK 65
+D L K + V D+ K T +V +L + L ++ +L++ R+
Sbjct: 146 IDTLSGTRYKARQFGVLCDVLDHMKRHRTRSVPVEDLLAILRAYTEKHLTNLRKLAKKRR 205
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ + P + A N LL+A CK G + EA + ++ + +A +Y+I +C
Sbjct: 206 V-----RMRTPPETDALNILLDAFCKCGMVREAETVFGRVKR-KLQGNAETYNILFFGWC 259
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG---ANP 182
A D +VL+ M P FTY I C V EA +L + M G ++P
Sbjct: 260 RARDPKKAMKVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSP 319
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y+ ++ ++ LI+ M K MPD T+ +++ + V + D A V
Sbjct: 320 TAKAYSVMIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVL 379
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E M K GF P + TY+ + LC + K ++A K E M++ P T ML
Sbjct: 380 EEMGKAGFPPDIVTYNCFLEVLCNLQ-KADDALKLCERMIEAHCEPSVHTYNML 432
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 8/288 (2%)
Query: 5 GIKPSI--YDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGEL 60
G+ S+ Y ++++L ++K VA+ FF A+ + F V TY+ ++ LG
Sbjct: 27 GLNASLNAYQVNEILK---QQKEAGVAYNFFIWARKQAGFKHDVHTYTTILGILGRAKSF 83
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
L DEM+ C +++ +N L+ +A ++D + + M+ +G EPD +Y
Sbjct: 84 DVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTL 143
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +A + + M+ P+ FTY+ II L K K+ AY+L EM +RG
Sbjct: 144 IDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGY 203
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P +YN I+ H + +MAL+L + + + PDR TY +++++L G + A +
Sbjct: 204 APSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQ 263
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E ME+ G+ + +MV + K G E+A ++F M+D G+ P
Sbjct: 264 VFEEMERAGWVADNPIFGLMVD-MWGKTGNAEKAAQWFNRMLDSGLQP 310
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 136/330 (41%), Gaps = 37/330 (11%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELS 61
+ G K ++ +L L + K V + D E P V TY+ L+ G +L
Sbjct: 60 QAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLD 119
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ KLF+ M C D + + +L++ KAG D A + R+M+ G PD F+YSI I
Sbjct: 120 SSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIII 179
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H +A +++ +++ M P++ TYN II K K + A +L ++ E G
Sbjct: 180 HCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYA 239
Query: 182 PDEWSYNAILAY-----HCDRAE---------------------VNM---------ALRL 206
PD +Y I+ H + AE V+M A +
Sbjct: 240 PDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQW 299
Query: 207 ITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
RM + P+ N +L +R +D A V M K G YP++ TY+ ++ C
Sbjct: 300 FNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS-CA 358
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
E F +M G P + +L
Sbjct: 359 ACRAAWEYDALFGLMGGTGHPAHPFVCSLL 388
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 122/302 (40%), Gaps = 15/302 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + G PS+ + ++ K +A + + + + + P TY I++ LG+ G
Sbjct: 198 MTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGH 257
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A ++F+EM D +++ K GN ++A M G +P+ + +
Sbjct: 258 IEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNS 317
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A+ ++ + VL M ++ L P + TY ++ C + Y L ++
Sbjct: 318 LLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS-CAACRAAWEYDALFGLMGGT 376
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRL---ITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+P ++LA A M + + M E + R + ++ L R G+
Sbjct: 377 GHPAHPFVCSLLA-SGGTAGGTMVVGIRCFFDAMQFEELESRRGFADSLIDFLHRAGKAV 435
Query: 237 RATEVWESMEKRGFYPSV------STYSVMVHGLCKKKGKLEEA---CKYFEMMVDEGIP 287
A VWE ++ YP+ +S+ +H + + A + E +V G
Sbjct: 436 AAGSVWEVAAEKNLYPNAVREKAPQYWSINLHVMSTGTALVALARTLAMFAEAVVRTGAA 495
Query: 288 PY 289
PY
Sbjct: 496 PY 497
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 12/279 (4%)
Query: 1 MVEFGIKPSIYDLD-----------QLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYS 48
MV G P I L+ L+H C+ +V VA F + +P + T +
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
L+ GL + G+L +A ++F + K +D N ++ MCK +DEA + +
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G E D +Y+I I F + + + M ++P+ TYN ++ CK ++EEA
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
Q++D M+ G +PD +++ ++ +C V+ L L + M + ++ D TYN ++
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHG 450
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
+VG + A +++E M G P T+ M+ GLC K
Sbjct: 451 FCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTK 489
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 1/227 (0%)
Query: 70 MLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
M+E CP +++ +L+ +C+ G + +A ++ M G +PDA +Y ++ C+ D
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
S +L M + NV Y+ I+ +LCK+ +A + EM E+G P+ +YN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++ +C + + A +L+ M + N+ PD T++ ++ V+ G+ A E++ M +R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+P+ TYS M+ G CK +LE+A F++MV +G P T+ L
Sbjct: 181 IFPTTITYSSMIDGFCKHS-RLEDAKHMFDLMVSKGCSPDIITLNTL 226
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 144/308 (46%), Gaps = 13/308 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E GI P++ + ++ C A Q D + P V T+S L+ G+
Sbjct: 106 MHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGK 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S A +L+ EML R + ++S+++ CK +++A M M S G PD + +
Sbjct: 166 VSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNT 225
Query: 120 FI-----------HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
I H FC+ +++ + M + P++ T N ++ LC+N K+E+A
Sbjct: 226 LIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKA 285
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++ + + D + N I+ C +V+ A L + V D TYN+++ +
Sbjct: 286 LEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV 345
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+ G F RA +++ M +G PS TY+ MV G CK+ +LEEA + + MV EG P
Sbjct: 346 FVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQN-RLEEARQMVDSMVSEGCSP 404
Query: 289 YSSTVEML 296
T L
Sbjct: 405 DVVTFSTL 412
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 13/270 (4%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
V T++ L+ GL G + +A L D M+E D + + +++ MCK G+ A MLR
Sbjct: 10 VVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLR 69
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+M + + YS + C+ + + M + PNV TYNC+I C
Sbjct: 70 KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYG 129
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
K +A QLL +MIER +PD +++A++ +V+ A L M + N+ P TY+
Sbjct: 130 KWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYS 189
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK----------GKLEE 273
++ + R + A +++ M +G P + T + ++ G C+ K G +
Sbjct: 190 SMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNV 249
Query: 274 ACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
A F+ M+ G+ P T L L GL
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTL---LAGL 276
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 13/312 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G ++ L++ LC+ V A D E P TY +V G+ +G+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A + +M E + +++ ++++++ +CK GN +A + EM G P+ +Y+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C ++L M N+ P+V T++ +I K KV A +L EM+ R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVR-------- 231
P +Y++++ C + + A + M + PD T N ++ R
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 232 ---VGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
VG + A ++++ M G P + T + ++ GLC + GKLE+A + F++ +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC-ENGKLEKALEMFKVFQKSKMDL 299
Query: 289 YSSTVEMLRNRL 300
++T ++ N +
Sbjct: 300 DTATCNIIINGM 311
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P I + LL LC+ ++ A + F K + T +I++ G+ +
Sbjct: 257 MISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNK 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LF+ + D++ +N L+ K GN A + EM G P +Y+
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC+ N + +++DSM P+V T++ +I+ CK +V++ +L EM +RG
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YNA++ C ++N A + M V PD T+ +L L +
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496
Query: 240 EVWESMEK 247
+ E ++K
Sbjct: 497 TMLEDLQK 504
>gi|302141771|emb|CBI18974.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 125/225 (55%), Gaps = 2/225 (0%)
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
AG +DEA G+++EM S +P +F YS+ +H + N I M+R + +V
Sbjct: 76 AGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAV 135
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I CK K++ AY++L+EM +G P+ + N IL + + A R+ RM
Sbjct: 136 YNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMI 195
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K PD TY M++K+ + + A +VW+ M + F PS+ T+SV+++GLC KKG
Sbjct: 196 KV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLC-KKGNA 253
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+AC E M+++GI P S T L+ L+ G D++E L +KM
Sbjct: 254 SKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKM 298
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARK 65
KP+ + L+H ++ A + F D ++E V Y+ L+ V +L A +
Sbjct: 95 KPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYR 154
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ +EM + + N +L ++ G+ DEA + R M + +PDA +Y++ I FC
Sbjct: 155 VLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFC 213
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
E + + +V M+ VP++ T++ +I LCK +A LL+EMIE+G P
Sbjct: 214 ENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSV 273
Query: 186 SYNAI 190
++ +
Sbjct: 274 TFGKL 278
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT YS+LV G + +A F +M + D+ +N+L+ A CK + A+ +
Sbjct: 96 PTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRV 155
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM G P++ + +I +++ D FRV M + P+ TY +I+ C+
Sbjct: 156 LNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCE 214
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N+K+E A ++ M + P +++ ++ C + + A L+ M ++ + P T
Sbjct: 215 NDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVT 274
Query: 222 YNMVLKLLVRVGRFD 236
+ + +LL++ GR D
Sbjct: 275 FGKLKQLLIKEGRED 289
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 52/114 (45%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
GI+P+ + +L++L A + F P TY+++++ + +L A
Sbjct: 163 GIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCENDKLEMAL 222
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
K++ M ++ + + L+ +CK GN +A +L EM G P + ++
Sbjct: 223 KVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFG 276
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ C+ +++A + + + +F P++ T+S+L+ GL G S+A L +EM+E+
Sbjct: 208 MIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKG 267
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
+ L + + K G D + +M + EP
Sbjct: 268 IRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEP 305
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G P+ L+ LCKR A + FD + P VK Y++L+ L + G
Sbjct: 205 MVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGR 264
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A +L M E CP D + + L +CKAG +DEA ++ G YS
Sbjct: 265 IEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSC 324
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A M ++ P++ Y +IR+ + + ++A+ LLDEM ++G
Sbjct: 325 LIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKG 384
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + YN +L D ++ A L++ M + NV+ D T+N+++ L + G D+A
Sbjct: 385 FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAM 444
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+V++ M + G +P+V TY+ ++ GL + G LEEA F M
Sbjct: 445 QVFDEMGEHGCHPTVMTYNALIDGL-YRAGMLEEARMLFHKM 485
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 49/284 (17%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
+P + Y+IL+R + G +A L DEM ++ D +N+LL+A+ GNID A
Sbjct: 349 SISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRA 408
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII-- 156
++ EM D+ +++I I C+ I +V D M + P V TYN +I
Sbjct: 409 QSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDG 468
Query: 157 ------------------------------------------RKL----CKNEKVEEAYQ 170
RKL C++ +V +AY+
Sbjct: 469 LYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYK 528
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
LL +IE G PD +YN ++ C ++ ALRL + + + PD TY ++ L
Sbjct: 529 LLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLW 588
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
R R + AT +++++ + G +PS+ Y+ M+ LC+ K KL +A
Sbjct: 589 RAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMK-KLSQA 631
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 36/329 (10%)
Query: 24 KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHN 83
+H + F + PT Y+ + + L D G + A L++ M+ C + +
Sbjct: 159 RHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYI 218
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
L++ +CK G +A M EM G PD Y++ + + C I R+L SMK
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN 278
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQ-------------------LLD----------- 173
P+ TY + LCK +V+EA+ L+D
Sbjct: 279 GCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEG 338
Query: 174 -----EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
EM+ + +PD Y ++ + A L+ M + +PD YN +LK
Sbjct: 339 LSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKA 398
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L VG DRA + M + +T+++M+ GLC KKG +++A + F+ M + G P
Sbjct: 399 LFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLC-KKGLIDKAMQVFDEMGEHGCHP 457
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKME 317
T L + L G L+ +L KME
Sbjct: 458 TVMTYNALIDGLYRAGMLEEARMLFHKME 486
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 4/259 (1%)
Query: 62 EARKLFDEMLERKC---PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A +FD + + + P A +L+ A AG EA M P AF Y+
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYN 183
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I + + M +PN TY ++ LCK +A ++ DEM+ER
Sbjct: 184 AVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER 243
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD Y +L+ C+ + A RL+ M + PD TY + L L + GR D A
Sbjct: 244 GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEA 303
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+E ++ GF + YS ++ GL + G+ +E Y+ M+ + I P + +L
Sbjct: 304 FHRFELLQDGGFTLGLIGYSCLIDGLF-QAGRFDEGLSYYTEMLGKSISPDITLYTILIR 362
Query: 299 RLVGLGFLDIIEILADKME 317
R G +L D+M+
Sbjct: 363 RFAEAGRTKDAFLLLDEMK 381
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 1/271 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
+ LV G EA + F M + C +N++ + + G I A + M
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRM 205
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
S G P++ +Y + + C+ ++ D M +VP+V Y ++ LC ++
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRI 265
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E+A +LL M E G PDE +Y L+ C V+ A + Y+ +
Sbjct: 266 EDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCL 325
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ L + GRFD + M + P ++ Y++++ + G+ ++A + M D+G
Sbjct: 326 IDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRF-AEAGRTKDAFLLLDEMKDKG 384
Query: 286 IPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P + L L +G +D + L +M
Sbjct: 385 FVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 54/302 (17%)
Query: 16 LLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEM---- 70
++ LCK+ + A Q FD +H PTV TY+ L+ GL G L EAR LF +M
Sbjct: 430 MICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGN 489
Query: 71 --------------------------------------------LERKCPVDILAHNSLL 86
+E D++ +N+L+
Sbjct: 490 NPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLI 549
Query: 87 EAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLV 146
+CKA N+D A + +E++ G PD +Y I A+ + + ++ R
Sbjct: 550 NGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGF 609
Query: 147 PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN---PDEWSYNAILAYHCDRAEVNMA 203
P++ YN ++R LC+ +K+ +A L + + + N DE NA + + ++
Sbjct: 610 PSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCF--EDGFLDET 667
Query: 204 LRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++ + ++ + + + Y + + L +V + D A ++ +E+ G + + +++++
Sbjct: 668 VKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINY 727
Query: 264 LC 265
LC
Sbjct: 728 LC 729
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 37/209 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
++E G+ P + + L++ LCK K++ A + F + + +P TY L+ GL
Sbjct: 533 IIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHR 592
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKA--------------------------- 92
++A LF +L + +N+++ ++C+
Sbjct: 593 ENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVI 652
Query: 93 ---------GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
G +DE L ++ + + Y+I++ C+ I R+ ++ +
Sbjct: 653 ANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEF 712
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+V +I LC + + A ++
Sbjct: 713 GIVVTPACCALLINYLCWDRNLNAAVDIM 741
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 150/279 (53%), Gaps = 12/279 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ ++ ++ +LCK +H A F +++ P V TYS L+ L + G S+A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK +++ ++L++A K G + +A + EM +P+ F+YS I+ F
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++L+ M R + +PNV TYN +I CK ++V++ +L EM +RG +
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 185 WSYNAIL-----AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ A CD A++ + +M V P+ TYN++L L + G+ +A
Sbjct: 429 VTYTTLIHGFFQARDCDNAQM-----VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
V+E +++ P + TY++M+ G+C K GK + YF
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKWKMGGIYF 521
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L+ LL+ C + A D + + P T++ L+ GL +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M++R C D++ + +++ +CK G+ D A +L +M + E + YS
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M+ + PNV TY+ +I LC + +A +LL +MIER
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ + ++ A +L M K ++ P+ TY+ ++ + R A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ E M ++ P+V TY+ +++G CK K ++++ + F M G+ + T L
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAK-RVDKGMELFREMSQRGLVGNTVTYTTL 434
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP L+H L A D + P + TY +V GL G+
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L ++M K +++ ++++++++CK + D+A + EM + G P+ +YS
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PN+ T++ +I K K+ +A +L +EMI+R
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ ++Y++++ C + A +++ M +++ +P+ TYN ++ + R D+
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + A F+ MV G+ P T +L +
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-DCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 300 LVGLGFLDIIEILADKMERST 320
L G L ++ + ++RST
Sbjct: 473 LCKNGKLAKAMVVFEYLQRST 493
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ +S L+ + + + ++M ++ +N L+ C+ + A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EPD + + ++ FC N I ++D M P+ T+ +I L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG PD +Y A++ C R + ++AL L+ +M + +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ V+ L + D A ++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC-NYGRWSDASRLLSDM 314
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L ++M +RS I ++ + G
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 3/271 (1%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
+L GL D+ EL +A LF M + + I+ + LL A+ K D +M +
Sbjct: 49 VLRTGLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + ++Y+I I+ FC + + +L M + P++ T N ++ C ++ +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD ++ ++ + + A+ LI RM + PD TY V+
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME +V YS ++ LCK + + ++A F M ++G+ P
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-DDALNLFTEMENKGVRP 286
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L + L G + D +L+D +ER
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIER 317
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 131/239 (54%), Gaps = 1/239 (0%)
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + EA+ + M+++ + + ++SL++ C ++ A G+ M G + +SY
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I I+ FC+ + + M L+P+V TYN +I LCK+ K+ A +L+DEM +
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG PD +Y+++L C +V+ A+ L+ + + + P+ +TY +++ L + GR +
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A ++E + +G+ +V+TY+VM+HG C KG +EA M D P + T E++
Sbjct: 329 AHNIFEDLLVKGYNITVNTYTVMIHGFC-NKGLFDEALALLSKMKDNSCFPNALTYEII 386
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P+ L+ C V A F + T V +Y+I++ G +
Sbjct: 161 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 220
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA LF+EM RK D++ +NSL+ +CK+G I A ++ EM G PD +YS
Sbjct: 221 TDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 280
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ A C+ + + +L ++K + PN++TY +I LCK ++E+A+ + ++++ +G
Sbjct: 281 LLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 340
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N +Y ++ C++ + AL L+++M + P+ TY ++++ L D+A
Sbjct: 341 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAE 400
Query: 240 EVWESMEKRGF 250
+ M RG
Sbjct: 401 NLLREMITRGL 411
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
GN+ EA +L M G P+A +YS + +C N++++ + +M + NV++Y
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
N +I CK + +EA L +EM R PD +YN+++ C +++ AL+L+ M
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
PD TY+ +L L + + D+A + ++++ +G P++ TY++++ GLCK G+LE
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKG-GRLE 327
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMR 332
+A FE ++ +G +T ++ + G D L KM + SC L +
Sbjct: 328 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM-KDNSCFPNALTYEII 386
Query: 333 GKTGFRKSRSEETE 346
++ F +++ E
Sbjct: 387 IRSLFDNDENDKAE 400
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 7/216 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEA 63
G+ +++ + +++ CK K A F+ + P V TY+ L+ GL G++S A
Sbjct: 200 GVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYA 259
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL DEM +R P DI+ ++SLL+A+CK +D+A +L+ ++ G P+ ++Y+I I
Sbjct: 260 LKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDG 319
Query: 124 FCEAN---DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
C+ D H++F L +K YN+ N TY +I C +EA LL +M +
Sbjct: 320 LCKGGRLEDAHNIFEDL-LVKGYNITVN--TYTVMIHGFCNKGLFDEALALLSKMKDNSC 376
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
P+ +Y I+ D E + A L+ M ++
Sbjct: 377 FPNALTYEIIIRSLFDNDENDKAENLLREMITRGLL 412
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ V A ++ M K+ + P+ TY+ ++ V + A ++ +M RG +V
Sbjct: 147 NEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADK 315
+Y++M++G CK K +EA FE M + P T L N L G + L D+
Sbjct: 207 SYNIMINGFCKIK-MTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDE 265
Query: 316 M 316
M
Sbjct: 266 M 266
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 2/288 (0%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGEL 60
+E G S+Y + L+H CK +K+A FD K PT +++ L+ G +G+L
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDL 187
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
E +L + M D+ ++ L+ +CK +D A+ + EM G P+ +++
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTL 247
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I C+ + + M +L P++ TYN +I LCK +++A L+DEM +G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD+ +Y ++ C ++ A RM KEN+ D Y ++ L + GR A +
Sbjct: 308 KPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M G P + TY+++++ C KKG + K + M +G P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFC-KKGDVWTGSKLMKEMQRDGYVP 414
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+++ LE P + N L+ CK G I A + + G P A S++ ++ +
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ ++M+ + P+V+TY+ +I LCK K++ A +L +EM++ G P+
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
++ ++ HC V++A+ + +M +++ PD TYN ++ L + G +A ++ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G LE A +Y + M+ E I
Sbjct: 303 SMKGLKPDKVTYTTLIDGSC-KEGDLETAFEYRKRMIKENI 342
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 15 QLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
++L L K K+ K+ F+ D+ + + ++ ++IL+ GE+ A+ +FD + +
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKW 165
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
++ N+L+ + G++DE + M++ G +PD ++YS+ I+ C+ + +
Sbjct: 166 GLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYA 225
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
+ + M LVPN T+ +I CKN +V+ A ++ +M+ + +PD +YN ++
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + ++ A LI M+ + + PD+ TY ++ + G + A E + M K
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILA 313
Y+ ++ GLC ++G+ +A K M+ G+ P T M+ N G + L
Sbjct: 346 DVAYTALISGLC-QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404
Query: 314 DKMER 318
+M+R
Sbjct: 405 KEMQR 409
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ +S L+ + G L +A + + E K V +LE + K G
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
+ G + ++I +H FC+ +I V D++ ++ L P ++N ++ +
Sbjct: 126 DSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLG 185
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++E ++L + M G PD ++Y+ ++ C ++++ A L M ++P+ T+
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFT 245
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + GR D A E+++ M + P + TY+ +++GLC KKG L++A + M
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAQDLIDEMSM 304
Query: 284 EGIPPYSSTVEML 296
+G+ P T L
Sbjct: 305 KGLKPDKVTYTTL 317
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 19/283 (6%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F T+++Y ++ L L EA+ L ++ RK S A I E
Sbjct: 9 FRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRK------GQGS---ASAVFAAILETK 59
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
G R D + +S I A+ E+ + K + T ++ L
Sbjct: 60 GTQRS--------DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHL 111
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K + + + ++ +E G + +N ++ C E+ +A + +TK + P
Sbjct: 112 MKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTA 171
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
++N ++ +R+G D + +M+ G P V TYSV+++GLCK+ K++ A + F
Sbjct: 172 VSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKES-KMDYANELFN 230
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEILADKMERSTS 321
M+D G+ P T L + G +D+ +EI + +S S
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 39/359 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE---FTPTVKTYSILVRGLGDV 57
M E G P ++ LL LC K + A + + P V +Y+ ++ G
Sbjct: 206 MPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKE 265
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G++ +A LF +ML+ P +++ NS+++ +CK +D+A +L++M P+ +Y
Sbjct: 266 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 325
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ IH + + R+L M R PNV TY+ +I LCK+ EA ++ + MI+
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385
Query: 178 RGANPDEWSYNAIL-AY----------------------------------HCDRAEVNM 202
G P+ +Y ++L Y +C ++
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A +M ++ MPD Y V+ L ++GR D A + M G P + T++ ++H
Sbjct: 446 ASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIH 505
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 321
G GK E+A + F M+D GIPP +T + ++L G + L D M R+ +
Sbjct: 506 GF-ALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGA 563
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 146/328 (44%), Gaps = 42/328 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
+++ G++ LL LC K A E TP V +Y+ L++GL
Sbjct: 170 IIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEK 229
Query: 59 ELSEARKLFDEMLER--KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
+ EA +L M E CP +++++ +++ K G++ +A+ + +M G P+ +
Sbjct: 230 KCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVT 289
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK------------------ 158
+ I C+ + VL M +++PN TYN +I
Sbjct: 290 CNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 349
Query: 159 -----------------LCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL-AYHCDRAEV 200
LCK+ EA ++ + MI+ G P+ +Y ++L Y + V
Sbjct: 350 RDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLV 409
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+M + M + + P RH +N+ + + GR D A+ + M+++GF P + Y+ +
Sbjct: 410 DMN-NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTV 468
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ GLC K G+L++A F M+D+G+ P
Sbjct: 469 IDGLC-KIGRLDDAMSRFCQMIDDGLSP 495
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 151/341 (44%), Gaps = 37/341 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ GI P++ + ++ LCK + + A E P TY+ L+ G G+
Sbjct: 278 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 337
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA ++ EM +++ ++ L++ +CK+G EA + M G +P+A +Y
Sbjct: 338 WTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGS 397
Query: 120 FIH-----------------------------------AFCEANDIHSVFRVLDSMKRYN 144
+H A+C+ + + M++
Sbjct: 398 LLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQG 457
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+P++ Y +I LCK ++++A +MI+ G +PD ++N ++ + A
Sbjct: 458 FMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAE 517
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M + P+ +T+N ++ L + G+ A ++++ M + G P+V +Y+ M+HG
Sbjct: 518 ELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGY 577
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGF 305
G++ E K + M+ G+ P + T L + +V +G
Sbjct: 578 -FIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGL 617
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 15/298 (5%)
Query: 9 SIYDLDQLLHALCK-------RKHVKVAHQFFDN----AKHEFTPTVKTYSILVRGLGDV 57
SIY L+QLL + + R +A F+ + P + T+ IL+ D
Sbjct: 98 SIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDA 157
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFS 116
G L+ ++++ + LL +C +A + LR M +G PD FS
Sbjct: 158 GCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFS 217
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKR--YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
Y+ + C ++ M N PNV +Y +I K V +AY L +
Sbjct: 218 YTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCK 277
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M++ G P+ + N+++ C ++ A ++ +M E++MP+ TYN ++ + G+
Sbjct: 278 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 337
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
+ A + + M + G P+V TYS+++ LC K G EA + F M+ G P +ST
Sbjct: 338 WTEAVRILKEMSRDGQRPNVVTYSMLIDCLC-KSGLHAEAREIFNSMIQSGQKPNAST 394
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDE-------AHGMLREMRS 107
GD+G +A LFDE+L+R P I A N LL + +A A M M
Sbjct: 76 GDLGP-EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMAR 134
Query: 108 IGAE---PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
GA+ PD ++ I I C+A ++ F L + + L T+ ++R LC ++
Sbjct: 135 AGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKR 194
Query: 165 VEEAYQL-LDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK--ENVMPDRHT 221
+A + L M E G PD +SY +L C + A LI M + +N P+ +
Sbjct: 195 TSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVS 254
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y V+ + G +A ++ M G P+V T + ++ GLCK + +++A + M
Sbjct: 255 YTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA-MDKAEAVLQQM 313
Query: 282 VDEGIPPYSSTVEML 296
+DE I P +T L
Sbjct: 314 IDEHIMPNCTTYNSL 328
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P I ++ LCK + A +F +P + T++ L+ G G+
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF EM++R P ++ NS+++ + K G + EA + M GA+P+ SY+
Sbjct: 513 WEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNT 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH + A ++ V ++LD M L P T+N LLD M+ G
Sbjct: 573 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFN----------------TLLDGMVSMG 616
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
PD + ++ C+ + L L M + D T N+ L+
Sbjct: 617 LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLR 664
>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
Length = 838
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 39 EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 98
+ P +++I+V GL V +L A L +M+ C +L N L+ +C +G +DEA
Sbjct: 432 DVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEA 491
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+ + +M+ +G +P F+Y+ ++ C D + +L M+ P + ++++
Sbjct: 492 YEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQ 551
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LC + ++ EA Q LD M+E G PD +Y+A + C ++ AL L ++ + +PD
Sbjct: 552 LCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPD 611
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
+N+++ + G+FD A E+ E M +G PSV TY++M+ C K G +++A
Sbjct: 612 VVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWC-KSGSIDKAITCV 670
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA 328
M+DE PP T L + L G D +L KM R C+ +A
Sbjct: 671 YKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKM-REKGCSPNGIA 719
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 148/288 (51%), Gaps = 4/288 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M + G+KPS + + LL+ +C+RK A + + P +K + +V+ L G
Sbjct: 498 MKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGR 557
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA + D MLE DI+ +++ + MCK G+I+ A G+ ++ S PD +++I
Sbjct: 558 ITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNI 617
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ F +A +++ M ++P+V TYN +I CK+ +++A + +MI+
Sbjct: 618 LINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEE 677
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +Y ++L C+ + A+ L +M ++ P+ Y ++ L + GR + A
Sbjct: 678 KPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAV 737
Query: 240 EVWESMEKRGFYPSVSTYSVM-VHGLCKKKGKLEEACKYFEMMVDEGI 286
+E M+ +GF + +S++ + L +G+ + C+ ++++ + +
Sbjct: 738 NYYEEMKTKGF--DLDIFSLLNLTNLLIAQGQASKGCELLKVVLQKDV 783
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 159/362 (43%), Gaps = 26/362 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M ++P+ L L+H L ++ V VA F A + F+ + YS+L+ GL E
Sbjct: 268 MEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNE 327
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDA--FSY 117
+ +A KLF++M + D+ ++EA C+ G+ + E ++ +P + Y
Sbjct: 328 MGKAVKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINE-NAVHLKPGSAVLLY 386
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRY-------------------NLVPNVFTYNCIIRK 158
++ + ++ + +++L SM R ++ PN ++N ++
Sbjct: 387 NVILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCG 446
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
LCK +K++ A L +M+ G +N ++ C+ +++ A + +M + P
Sbjct: 447 LCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPS 506
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
TYN +L + R A ++ M P + + MV LC G++ EA ++
Sbjct: 507 EFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLC-LSGRITEALQFL 565
Query: 279 EMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFR 338
+ M++ G P T N + +G DI L ++ S+ C + ++ GFR
Sbjct: 566 DGMLELGFLPDIVTYSAAMNGMCKVG--DIENALGLFLDISSKCYLPDVVAHNILINGFR 623
Query: 339 KS 340
K+
Sbjct: 624 KA 625
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G P I ++ +CK ++ A F D + + P V ++IL+ G G+
Sbjct: 568 MLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGK 627
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA+++ +EML + ++ +N +++ CK+G+ID+A + +M P +Y+
Sbjct: 628 FDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTS 687
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C A + M+ PN Y ++ LCK ++E A +EM +G
Sbjct: 688 LLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKG 747
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ D +S + + + + L+ + +++V+ + H
Sbjct: 748 FDLDIFSLLNLTNLLIAQGQASKGCELLKVVLQKDVVHNNH 788
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G + S Y L+ + L + + D + T L+R LG G A
Sbjct: 96 GFRHSCYSLNAMASLLPPHQRAHLDRLATDALVSRCSMTPGALGFLLRRLGAAGLPDTAA 155
Query: 65 KLFDEM-LERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++FD C + +N LL+A+ KAG ++A L+EM +
Sbjct: 156 RVFDAAKTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVVTCGD------------ 203
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+S+ RY L + Y C + E+A +L M +R A D
Sbjct: 204 --------------ESVDRYTLTSLLQCY-------CNAGRPEDASAVLQRMSKR-AWVD 241
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
E ++ + +V A+ L+ RM ++ P+ T ++++ L R GR D A ++
Sbjct: 242 EHVLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFG 301
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M GF ++ YSV++ GLC ++ +A K FE M + I P
Sbjct: 302 KMASYGFSVDLAMYSVLIEGLCHGN-EMGKAVKLFEDMKRDRITP 345
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 135 RVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP--DEWSYNAIL 191
RV D+ K + PN +TYNC++ L K + E+A L EM+ + D ++ ++L
Sbjct: 156 RVFDAAKTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVVTCGDESVDRYTLTSLL 215
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C+ A ++ RM+K + D H M++ + G+ + A E+ ME
Sbjct: 216 QCYCNAGRPEDASAVLQRMSKRAWV-DEHVLTMLIVAYSKWGKVEDAVELLGRMEALDMR 274
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG----IPPYSSTVEML 296
P+ T SV+VHGL ++G+++ A F M G + YS +E L
Sbjct: 275 PNEKTLSVLVHGL-ARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGL 322
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 129/363 (35%), Gaps = 96/363 (26%)
Query: 28 VAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSEARKLFDEMLERKC---PVDILAH 82
A + FD AK + P TY+ L+ L G +A EM+ C VD
Sbjct: 153 TAARVFDAAKTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVV-TCGDESVDRYTL 211
Query: 83 NSLLEAMCKAGNIDEAHGMLREM----------------------------------RSI 108
SLL+ C AG ++A +L+ M ++
Sbjct: 212 TSLLQCYCNAGRPEDASAVLQRMSKRAWVDEHVLTMLIVAYSKWGKVEDAVELLGRMEAL 271
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
P+ + S+ +H + + M Y ++ Y+ +I LC ++ +A
Sbjct: 272 DMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKA 331
Query: 169 YQLLDEMIERGANPD---------------EWS---------------------YNAILA 192
+L ++M PD ++S YN IL
Sbjct: 332 VKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILD 391
Query: 193 YHCDRAEVNMALRLITRMTK-------------------ENVMPDRHTYNMVLKLLVRVG 233
+ EV A +L++ M + E+V P+ ++N+V+ L +V
Sbjct: 392 GLINHGEVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVK 451
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
+ D A + + M G + ++ ++ LC GKL+EA + F M D G+ P T
Sbjct: 452 KLDLALALTKDMVGLGCKGKLLMFNDLILELC-NSGKLDEAYEIFNQMKDLGLKPSEFTY 510
Query: 294 EML 296
L
Sbjct: 511 NSL 513
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 146/299 (48%), Gaps = 2/299 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++E G S+Y + L+H CK ++VA FD K P+V +Y+ L+ G +G+
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E +L ML D+ ++ L+ +CK +D+A+ + EM G P+ ++
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTT 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M +L+P++ TYN +I LCK +++ + L+DEM +G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD+ +Y ++ C +++ A +M +EN+ D Y ++ L + GR A
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
++ M G P TY+++++ C KKG + + K + M +G P T +L N
Sbjct: 373 KMLREMLNVGLKPDARTYTMIINEFC-KKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ E+LE P + N L+ CK G+I A + + G P SY+ ++ +
Sbjct: 129 FYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
D+ FR+ +M + P+V+TY+ +I LCK K+++A +L DEM+ +G P+
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+ ++ HC V++A+ + +M ++++PD TYN ++ L + G + + + M
Sbjct: 249 IFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEM 308
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P TY+ ++ G C K+G L+ A ++ + M+ E I
Sbjct: 309 SMKGLKPDKITYTTLIDGCC-KEGDLDTAFEHRKQMIQENI 348
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ +S L+ + G L +A + + E K V +LE + K G +
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYK 131
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
E+ G + ++I +H FC+ DI V D++ ++ L P+V +YN ++ +
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
++E ++L M+ G PD ++Y+ ++ C ++++ A L M + ++P+ +
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFT 251
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++ + GR D A E+++ M + P + TY+ +++GLC KKG L++ + M
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC-KKGDLKQVHHLIDEMSM 310
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLD 307
+G+ P T L + G LD
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLD 334
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Query: 36 AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 95
A F T+ +Y ++ L L EA+ L ++ RK G+
Sbjct: 11 ANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRK----------------GKGSA 54
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+ E + D + +S I A+ E+ + + + T +
Sbjct: 55 SAVFAAILETKGT-QRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 113
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ L K + + + E++E G + +N ++ C ++ +A + +TK +
Sbjct: 114 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P +YN ++ +R+G D + +M G P V TYSV+++GLCK+ K+++A
Sbjct: 174 RPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES-KMDDAN 232
Query: 276 KYFEMMVDEGIPP 288
+ F+ M+ +G+ P
Sbjct: 233 ELFDEMLVKGLVP 245
>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 6/279 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++ ++P+ Y + L+ CKR VK A + D K P V + + ++ G
Sbjct: 145 MLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANN 204
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF++M E P D+++ N +L CK G ++EA + +++ G + SYS
Sbjct: 205 VDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSS 264
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+AF +A M + +VP+V Y +IR L K +V EA ++L+EM + G
Sbjct: 265 LINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD + YNA++ CD +N A L +++ NV T+ +++ + + G A
Sbjct: 325 LTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVC----THTILICEMCKRGMVAEAQ 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
E++ MEK G PSV T++ +++GLC K LE+A F
Sbjct: 381 ELFNQMEKLGCEPSVVTFNTLINGLC-KANNLEKAKNLF 418
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 1/274 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
LVR +G +A + F M E D +N++L + ++ A + M
Sbjct: 90 LVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSN 149
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
EP+ ++Y++ I FC+ ++ +LD MKR +VP V + I+ C+ V+EA+
Sbjct: 150 VEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAH 209
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L ++M E PD S N +L C + AL + + + +R++Y+ ++
Sbjct: 210 KLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAF 269
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ R+ A + M K+G P V Y++M+ GL K+G++ EA K E M G+ P
Sbjct: 270 FKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGL-SKEGRVGEAAKMLEEMTQIGLTPD 328
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERSTSCT 323
+ + L +G L+ + L ++ CT
Sbjct: 329 AYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCT 362
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 20/294 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M + GI P + ++ L K V A + + TP Y+ +++GL DVG
Sbjct: 285 MFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGL 344
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+ L E+ E ++ H L+ MCK G + EA + +M +G EP +++
Sbjct: 345 LNRAQSLRLEISEH----NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNT 400
Query: 120 FIHAFCEANDIH---SVFRVLDSMKRYNLVPNVFTYNCII----------RKLCKNEKVE 166
I+ C+AN++ ++F L+ +R++L ++ + + +++C+ ++
Sbjct: 401 LINGLCKANNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQIL 460
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV-MPDRHTYNMV 225
AY+L+ ++ PD +YN +L C EVN A + K+ PD TY +
Sbjct: 461 RAYKLITDLAGE-VKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTI 519
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+K L V R D A +V++ M+K G P++S Y ++ LC+K YFE
Sbjct: 520 IKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFE 573
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 109/224 (48%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P Y+ ++R + + L A L+ ML+ + +N L++ CK G + A M
Sbjct: 117 PDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEM 176
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L EM+ +G P S + ++ C+AN++ ++ + MK + P++ + N ++ CK
Sbjct: 177 LDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCK 236
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++EEA + + G + + SY++++ A T+M K+ ++PD
Sbjct: 237 MGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVL 296
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
Y ++++ L + GR A ++ E M + G P Y+ ++ GLC
Sbjct: 297 YAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLC 340
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 128/303 (42%), Gaps = 22/303 (7%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV--- 57
M + G +PS+ + L++ LCK +++ A F K E + L +G G V
Sbjct: 386 MEKLGCEPSVVTFNTLINGLCKANNLEKAKNLF--CKLEVGRRHSLHLSLSQGSGQVSDS 443
Query: 58 -------------GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 104
G++ A KL ++ P DI+ +N LL A+C ++ A+
Sbjct: 444 ARLLKKAKEMCEAGQILRAYKLITDLAGEVKP-DIITYNILLNALCMDREVNAAYNFFEF 502
Query: 105 MRSIG-AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
++ G PD +Y I + F+V M++ P + Y ++ LC+
Sbjct: 503 LQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKS 562
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
KV A+ L E ++ + D S +A+ Y ++ +R + + + Y
Sbjct: 563 KVSRAFTLYFEHLKSLPSRDNDSISALEKYLFGE-KLEQVIRGLLELDFKARDFKLAPYT 621
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
++L + G+ A + +++ + ++ ++ GLCK++ +L +A K F ++
Sbjct: 622 ILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQ-RLHDAVKIFLYSLE 680
Query: 284 EGI 286
+G
Sbjct: 681 KGF 683
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVF-RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
++ EP I H + +S++ L+ +K+ ++ + ++R
Sbjct: 46 NLSYEPYCLVNRILFH-----RNWYSIYWEALELLKKNGVLVTSDSVRALVRSYSHMGYT 100
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E+A + M E G PD YN IL + + +AL L T M K NV P+ +TYNM+
Sbjct: 101 EKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNML 160
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + G A E+ + M++ G P V + + +++G C + ++EA K F M +
Sbjct: 161 IDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCC-QANNVDEAHKLFNDMKETS 219
Query: 286 IPPYSSTVEMLRNRLVGLGFLD 307
PP + ++ N +G L+
Sbjct: 220 YPPDMISCNVVLNGFCKMGRLE 241
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 161/299 (53%), Gaps = 8/299 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDVGE 59
EF + ++ + +L+ + + A +F++ K +P V +++++++ + +G
Sbjct: 144 EFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGL 203
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++F EM +KC D+ + +L++ +CK IDEA +L EM+ G P + ++++
Sbjct: 204 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 263
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C+ D+ V +++D+M VPN TYN II LC K+++A LLD M+
Sbjct: 264 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 323
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P++ +Y ++ + + L++ + + + + Y+ ++ L + + + A
Sbjct: 324 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 383
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+W+ M ++G P++ YS ++ GLC ++GKL+EA + MV++G P YSS ++
Sbjct: 384 GLWKKMVEKGCQPNIVVYSALIDGLC-REGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 6/297 (2%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGELSEARK 65
+P ++ L+ LCK + A D + E P+ T+++L+ GL G++ K
Sbjct: 220 EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 279
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L D M + C + + +N+++ +C G +D+A +L M + P+ +Y I+
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ +L S++ N + Y+ +I L K EK EEA L +M+E+G P+
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
Y+A++ C +++ A ++ M + P+ TY+ ++K + G +A VW+ M
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRN 298
K P+ YSV++HGLC + GKL EA + M+ G+ P YSS + L N
Sbjct: 460 AKNNCVPNEICYSVLIHGLC-EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCN 515
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 138/271 (50%), Gaps = 22/271 (8%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
YS L+ GL + EA L+ +M+E+ C +I+ +++L++ +C+ G +DEA +L EM
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
+ G P+AF+YS I F + + RV M + N VPN Y+ +I LC++ K+
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM--TKENVMPDRHTYN 223
EA + M+ RG PD +Y++++ C+ V + L+L M + + PD TYN
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL------------------- 264
++L+ L + A ++ SM RG P + T ++ ++ L
Sbjct: 545 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVV 604
Query: 265 -CKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
K+ ++ A K E+M+ + +PP +ST E
Sbjct: 605 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWE 635
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
++L+ N +++AMCK G +D A + REM EPD F+Y + C+ + I +L
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
D M+ P+ T+N +I LCK + +L+D M +G P+E +YN I+ C +
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+++ A+ L+ RM +P+ TY ++ LV+ GR + S+E+RG + + Y
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILADKM 316
S ++ GL K++ K EEA ++ MV++G P L + L G LD EIL + +
Sbjct: 367 STLISGLFKEE-KSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425
Query: 317 ERSTSCTIQELANAMRG--KTG 336
+ + ++ ++G KTG
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTG 447
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 23/274 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P+I L+ LC+ + A + + TP TYS L++G G
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 448
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +++ EM + C + + ++ L+ +C+ G + EA M M G PD +YS
Sbjct: 449 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 508
Query: 120 FIHAFCEANDIHSVFRVLDSM--KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
IH C A + ++ + M + + P+V TYN ++R LCK + A LL+ M++
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
RG NPD + N L ALR E + P + + +L+VR+ + R
Sbjct: 569 RGCNPDLITCNIFLN----------ALR-------EKLNPPQDGREFLDELVVRLHKRQR 611
Query: 238 ---ATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
A ++ E M ++ P+ ST+ ++ LCK K
Sbjct: 612 IVGAAKIIEVMLQKFLPPNASTWERIIPELCKPK 645
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 138/334 (41%), Gaps = 39/334 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
G PS + L++ LCK+ + + DN P TY+ ++ GL G+L +A
Sbjct: 253 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 312
Query: 64 RKLFDEMLERKC-PVDIL----------------------------------AHNSLLEA 88
L D M+ KC P D+ A+++L+
Sbjct: 313 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 372
Query: 89 MCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPN 148
+ K +EA G+ ++M G +P+ YS I C + +L M PN
Sbjct: 373 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 432
Query: 149 VFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
FTY+ +I+ K ++A ++ EM + P+E Y+ ++ C+ ++ A+ + T
Sbjct: 433 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWT 492
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM--EKRGFYPSVSTYSVMVHGLCK 266
M + PD Y+ ++ L G + +++ M ++ P V TY++++ LCK
Sbjct: 493 HMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCK 552
Query: 267 KKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + A M+D G P T + N L
Sbjct: 553 QN-SISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D+ YS+ I + + D ++F+V D MKR V + + R K E+A +L
Sbjct: 80 DSTFYSL-IENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELF 138
Query: 173 DEMI-ERGANPDEWSYNAILAYHCDRAEVNMALRL--ITRMTKENVMPDRHTYNMVLKLL 229
M+ E S+N++L + AL K N+ P+ ++N+V+K +
Sbjct: 139 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 198
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
++G DRA EV+ M + P V TY ++ GLCK+ +++EA + M EG P
Sbjct: 199 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED-RIDEAVLLLDEMQIEGCFPS 257
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKM 316
S T +L N L G + + L D M
Sbjct: 258 SVTFNVLINGLCKKGDMVRVTKLVDNM 284
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML--E 72
L+H LC+ ++ A + + P V YS ++ GL + G + KLF+EML E
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEA----- 127
D++ +N LL A+CK +I A +L M G PD + +IF++A E
Sbjct: 534 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQ 593
Query: 128 ----------------NDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
I ++++ M + L PN T+ II +LCK +KV+
Sbjct: 594 DGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ LCK KH+ A F+ + + P V TY+ L+ L + G S+A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYSIFIHA 123
+L +MLE+ D++ N+L++A K G + EA + EM +S PD +Y+ I
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + V M + LV N TY +I + + A + +M+ G +PD
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C+ V AL + M K ++ D TY +++ L + G+ + +++
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
S+ +G P+V TY+ M+ G C+K K E + EM D +P + ++R RL
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF +M++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
IFI+ FC + + +L M + P++ T N ++ C ++ EA L+D+M+E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++ ++ + + A+ L+ RM + PD TY V+ L + G D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ MEK V Y+ ++ GLCK K +++A F M +GI P T L +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYK-HMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 299 RLVGLG-FLDIIEILADKMERSTS 321
L G + D +L+D +E++ +
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNIN 317
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 136/277 (49%), Gaps = 6/277 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD---NAKHEFTPTVKTYSILVRGLGDV 57
M+E I P + + L+ A K + A + +D +KH F P V Y+ L++G
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKY 369
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
+ E ++F EM +R + + + +L+ +A + D A + ++M S G PD +Y
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+I + C ++ + V + M++ ++ ++ TY +I LCK KVE+ + L +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
+G P+ +Y +++ C + A L M ++ +P+ TYN +++ +R G
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+ E+ + M GF ST+ ++ + L G+L+++
Sbjct: 550 SAELIKEMRSCGFAGDASTFGLVTNML--HDGRLDKS 584
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 133/291 (45%), Gaps = 1/291 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D K P++ +S L+ + + + L ++M ++ ++ + C+
Sbjct: 63 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCR 122
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G P + + ++ FC N I ++D M P+ T
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ ++ L ++ K EA L++ M+ +G PD +Y A++ C R E ++AL L+ +M
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + D YN ++ L + D A +++ ME +G P V TY+ ++ LC G+
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC-NYGRW 301
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSC 322
+A + M+++ I P L + V G L E L D+M +S C
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
RK+ ++ K+++A L +M++ P ++ +L+ + ++ + L +M +
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 217 PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACK 276
+ +TY++ + R + A + M K G+ PS+ T + +++G C ++ EA
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN-RISEAVA 166
Query: 277 YFEMMVDEGIPPYSSTVEMLRNRL 300
+ MV+ G P + T L + L
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGL 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,226,687,001
Number of Sequences: 23463169
Number of extensions: 206641410
Number of successful extensions: 664487
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6616
Number of HSP's successfully gapped in prelim test: 5812
Number of HSP's that attempted gapping in prelim test: 507448
Number of HSP's gapped (non-prelim): 65131
length of query: 350
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 207
effective length of database: 9,003,962,200
effective search space: 1863820175400
effective search space used: 1863820175400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)