BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018782
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 220/347 (63%), Positives = 288/347 (82%), Gaps = 1/347 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVEFGIKP + DLDQLLH+LC +KHV A +FF AK P+ KTYSILVRG + +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S ARK+FDEMLER C VD+LA+N+LL+A+CK+G++D + M +EM ++G +PDA+S++I
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
FIHA+C+A D+HS ++VLD MKRY+LVPNV+T+N II+ LCKNEKV++AY LLDEMI++G
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
ANPD W+YN+I+AYHCD EVN A +L++RM + +PDRHTYNMVLKLL+R+GRFDRAT
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+WE M +R FYP+V+TY+VM+HGL +KKGKLEEAC+YFEMM+DEGIPPYS+TVEMLRNR
Sbjct: 404 EIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR 463
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEETE 346
LVG G +D++++LA KMERS+SC++Q++A MRGK RSE +E
Sbjct: 464 LVGWGQMDVVDVLAGKMERSSSCSVQDMAVEMRGKRRRLGRRSENSE 510
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 10/270 (3%)
Query: 29 AHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK----CPVDILAH 82
AH+FF A+ +F ++++Y ILV LG + + L+D ++E + +
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFA---LLWDFLIEAREYNYFEISSKVF 141
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
+ A +A EA M G +P +H+ C+ ++ K
Sbjct: 142 WIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKG 201
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+ +VP+ TY+ ++R + A ++ DEM+ER D +YNA+L C +V+
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDG 261
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
++ M + PD +++ + + G A +V + M++ P+V T++ ++
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
LCK + K+++A + M+ +G P + T
Sbjct: 322 TLCKNE-KVDDAYLLLDEMIQKGANPDTWT 350
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 180/316 (56%), Gaps = 2/316 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ + P++ + LL ALCK K+V+ A + F+N + FTP KTYSIL+ G G L
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNL 253
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+AR++F EM++ C DI+ ++ +++ +CKAG +DEA G++R M +P F YS+
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+H + N + M+R + +V +N +I CK +++ Y++L EM +G
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P+ S N IL + +R E + A + +M K PD TY MV+K+ + A +
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADK 432
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
VW+ M K+G +PS+ T+SV+++GLC+++ ++AC E M++ GI P T LR L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTT-QKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Query: 301 VGLGFLDIIEILADKM 316
+ D+++ L +KM
Sbjct: 492 IKEEREDVLKFLNEKM 507
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 28 VAHQFFDNAKHE--FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSL 85
+ ++FF ++ + + +V+ Y +++ + + L + M ++K +++ +
Sbjct: 116 LTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIV 174
Query: 86 LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNL 145
+ +A +DEA M P+ +++ + A C++ ++ V ++M R
Sbjct: 175 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRF 233
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
P+ TY+ ++ K + +A ++ EMI+ G +PD +Y+ ++ C V+ AL
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ M P Y++++ R + A + + ME+ G V+ ++ ++ C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
K +++ + + M +G+ P S + ++ L+ G
Sbjct: 354 -KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 160/304 (52%), Gaps = 4/304 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G++P Y LL ALCK VK A + F++ + +F P ++ ++ L+ G G+L
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKL 252
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+++ +M E DI+ +LL AG + +A+ ++ +MR G EP+ Y++
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 121 IHAFCEAND-IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C + RV M+RY ++ TY +I CK +++ Y +LD+M ++G
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P + +Y I+ H + + L LI +M + PD YN+V++L ++G A
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI--PPYSSTVEMLR 297
+W ME G P V T+ +M++G +G L EAC +F+ MV GI P T++ L
Sbjct: 433 RLWNEMEANGLSPGVDTFVIMINGF-TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Query: 298 NRLV 301
N LV
Sbjct: 492 NNLV 495
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 6/238 (2%)
Query: 84 SLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
S++ + K G++ EMR E P+ F + + F AN + VLD M
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEM 193
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
+Y L P+ + + C++ LCKN V+EA ++ ++M E+ P+ + ++L C ++
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PNLRYFTSLLYGWCREGKL 252
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A ++ +M + + PD + +L G+ A ++ M KRGF P+V+ Y+V+
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMER 318
+ LC+ + +++EA + F M G T L + G +D + D M +
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 126/346 (36%), Gaps = 82/346 (23%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E G++P I LL + A+ D K F P V Y++L++ L +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 -LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA-------- 110
+ EA ++F EM C DI+ + +L+ CK G ID+ + +L +MR G
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 111 ---------------------------EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRY 143
PD Y++ I C+ ++ R+ + M+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 144 NLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG--ANP------------------- 182
L P V T+ +I + EA EM+ RG + P
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 183 ---DEWSYNAILAYHCD---------------RAEVNMALRLITRMTKENVMPDRHTYNM 224
D WS + C+ + V A M + ++MP +TY
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 225 VLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
++K L ++ A E+ E + K +++ M + KKKG+
Sbjct: 562 LMKGLNKLYNRTIAAEITEKVVK------MASEREMSFKMYKKKGE 601
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 3/347 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M +FG +P Y LL ALCK VK A + F++ + F ++ ++ L+ G VG++
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA+ + +M E DI+ + +LL AG + +A+ +LR+MR G EP+A Y++
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A C+ + + +V M+RY +V TY ++ CK K+++ Y +LD+MI++G
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
P E +Y I+ H + L L+ +M + PD YN+V++L ++G A
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 448
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS--STVEMLRN 298
+W ME+ G P V T+ +M++GL +G L EA +F+ MV G+ S T+++L N
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLA-SQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLN 507
Query: 299 RLVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEET 345
++ L++ + + + +C + L+ + F K +E
Sbjct: 508 TVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 55 GDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA---E 111
GD G L ++ R C I + S+++ + K G++ EMR E
Sbjct: 124 GDAGNLGYRFFVWAAKQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIE 182
Query: 112 PDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL 171
P+ F + + F A+ + VLD M ++ P+ + + C++ LCK+ V++A +L
Sbjct: 183 PELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 172 LDEMIERGANPDEWSYNAILAY-HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
++M R P Y L Y C ++ A ++ +M + PD Y +L
Sbjct: 241 FEDM--RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
G+ A ++ M +RGF P+ + Y+V++ LCK ++EEA K F
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD-RMEEAMKVF 345
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 156/286 (54%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M+++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ A R+ +M + + P HT+NM++K ++
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VWE M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLI-GEGKSREACRYLEEMLDKGM 539
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D +NS++ + K + +L EM + G +++I + AF A + +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ MK+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 311
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A R+ M + + PD +N++L+ L+R + A +++ M+ +G P+V +Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++M+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 372 TIMIRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 414
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + A + +M EP ++++ + +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V + M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 483 YFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Query: 184 EWSYNAILA 192
YN A
Sbjct: 543 LIDYNKFAA 551
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ ++ K P +Y++L+RGL G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N + G
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G P + L+ + +K + A + ++ ++E P++ T++++++
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
R +++EM+++ D ++ L+ + G EA L EM G + Y+
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 120 FIHAF 124
F F
Sbjct: 549 FAADF 553
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 157/310 (50%), Gaps = 3/310 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GIK + L+ LC K A + P V T+S L+ G+L EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L++EM+ R D + +NSL++ CK + EA+ M M S G EPD +YSI I++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + R+ + L+PN TYN ++ C++ K+ A +L EM+ RG P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E+N AL + +M K + YN+++ + + D A ++
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML-RNRLVG 302
S+ +G P V TY+VM+ GLC KKG L EA F M ++G P T +L R L G
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLC-KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 303 LGFLDIIEIL 312
G + +E++
Sbjct: 574 SGLISSVELI 583
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MVE+G +P +L+ LCK + +A F + +V YSI++ L G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A LF+EM + D++ ++SL+ +C G D+ MLREM PD ++S
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + + + + M + P+ TYN +I CK + EA Q+ D M+ +G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ +C V+ +RL ++ + ++P+ TYN ++ + G+ + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+++ M RG PSV TY +++ GLC G+L +A + FE M
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLC-DNGELNKALEIFEKM 481
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 3/324 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E IK S+ ++ +LCK A F+ + + V TYS L+ GL + G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ K+ EM+ R D++ ++L++ K G + EA + EM + G PD +Y+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ N +H ++ D M P++ TY+ +I CK ++V++ +L E+ +G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C ++N A L M V P TY ++L L G ++A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E M+K + Y++++HG+C K+++A F + D+G+ P T ++
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNAS-KVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 300 LVGLGFLDIIEILADKMERSTSCT 323
L G L ++L KM + CT
Sbjct: 535 LCKKGSLSEADMLFRKM-KEDGCT 557
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE +P + + L++ LC + V A D ++ F P TY ++ L G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A LF +M ER ++ ++ +++++CK G+ D+A + EM G + D +YS
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M N++P+V T++ +I K K+ EA +L +EMI RG
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN+++ C ++ A ++ M + PD TY++++ + R D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + +G P+ TY+ +V G C+ GKL A + F+ MV G+PP T +L +
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQS-GKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + +KM++S
Sbjct: 465 LCDNGELNKALEIFEKMQKS 484
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+ +Y + +++ C++K + A A K + P T+S LV G G +SEA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E K D++ ++L+ +C G + EA ++ M G +PD +Y ++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ + + M+ N+ +V Y+ +I LCK+ ++A L +EM +G D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C+ + + +++ M N++PD T++ ++ + V+ G+ A E++
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TY+ ++ G CK+ L EA + F++MV +G P T +L N
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENC-LHEANQMFDLMVSKGCEPDIVTYSILIN 393
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 1/269 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + L+ CK + A+Q FD P + TYSIL+
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF E+ + + + +N+L+ C++G ++ A + +EM S G P +Y I
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ +++ + + M++ + + YN II +C KV++A+ L + ++G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ PD TYN++++ + +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
E+ E M+ GF ST +++ L ++
Sbjct: 581 ELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 12/256 (4%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERK---CPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
L G+ D+ ++++A LF+ M++ + P+D N L A+ + D G + M
Sbjct: 42 LRNGIVDI-KVNDAIDLFESMIQSRPLPTPID---FNRLCSAVARTKQYDLVLGFCKGME 97
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVE 166
G E D ++ +I I+ +C + F VL + P+ T++ ++ C +V
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 167 EAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL 226
EA L+D M+E PD + + ++ C + V+ AL LI RM + PD TY VL
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 227 KLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
L + G A +++ ME+R SV YS+++ LC K G ++A F M +GI
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC-KDGSFDDALSLFNEMEMKGI 276
Query: 287 PP----YSSTVEMLRN 298
YSS + L N
Sbjct: 277 KADVVTYSSLIGGLCN 292
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
KV +A L + MI+ P +N + + + ++ L M + D +T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R + A V K G+ P T+S +V+G C + G++ EA + MV+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE-GRVSEAVALVDRMVE 168
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
P TV L N L G + +L D+M
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
M+ G+KP ++ + ++ +CK V A + N + + P V +Y+IL+R L + G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E KL +M KC +++ ++ L+ +C+ G I+EA +L+ M+ G PDA+SY
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AFC + L++M +P++ YN ++ LCKN K ++A ++ ++ E G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ SYN + + + AL +I M + PD TYN ++ L R G D A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ M F+PSV TY++++ G CK ++E+A E MV G P +T +L
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAH-RIEDAINVLESMVGNGCRPNETTYTVL--- 549
Query: 300 LVGLGF 305
+ G+GF
Sbjct: 550 IEGIGF 555
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 3/309 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKL 66
P + ++ +LC R + +A + + PTV TY+IL+ G + EA KL
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
DEML R D+ +N+++ MCK G +D A M+R + G EPD SY+I + A
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ M PNV TY+ +I LC++ K+EEA LL M E+G PD +S
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++A C +++A+ + M + +PD YN VL L + G+ D+A E++ +
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G P+ S+Y+ M L K+ EMM + GI P T + + L G +
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMV 489
Query: 307 D-IIEILAD 314
D E+L D
Sbjct: 490 DEAFELLVD 498
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 157/303 (51%), Gaps = 3/303 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELS 61
+FG +P ++ + L++ CK + A + D + +F+P TY+I++ L G+L
Sbjct: 152 KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
A K+ +++L C ++ + L+EA G +DEA ++ EM S G +PD F+Y+ I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
C+ + F ++ +++ P+V +YN ++R L K EE +L+ +M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ +Y+ ++ C ++ A+ L+ M ++ + PD ++Y+ ++ R GR D A E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
E+M G P + Y+ ++ LC K GK ++A + F + + G P SS+ + + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 302 GLG 304
G
Sbjct: 450 SSG 452
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV G P + +L+ +++ A + + + P V Y+ L+ G + +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRI 174
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
+A ++ D M + D + +N ++ ++C G +D A +L ++ S +P +Y+I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I A + +++D M L P++FTYN IIR +CK V+ A++++ + +G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD SYN +L ++ + +L+T+M E P+ TY++++ L R G+ + A
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ + M+++G P +Y ++ C ++G+L+ A ++ E M+ +G P
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVAIEFLETMISDGCLP 401
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 71/293 (24%)
Query: 90 CKAGNIDEAHGMLREMRSIG----------------------------------AEPDAF 115
C++GN E+ +L M G +PD F
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 116 SYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK----------- 164
+Y+ I+ FC+ N I RVLD M+ + P+ TYN +I LC K
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 165 ------------------------VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
V+EA +L+DEM+ RG PD ++YN I+ C V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
+ A ++ + + PD +YN++L+ L+ G+++ ++ M P+V TYS++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI-IEIL 312
+ LC + GK+EEA ++M ++G+ P + + + L G LD+ IE L
Sbjct: 340 ITTLC-RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Query: 155 IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN 214
I + C++ E+ LL+ M+ +G NPD ++ + A+R++ + K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 215 VMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
PD YN ++ ++ R D AT V + M + F P TY++M+ LC +GKL+ A
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC-SRGKLDLA 212
Query: 275 CKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K ++ + P T +L + G +D L D+M
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P + ++ LC+ V A + D EF P+V TY+I++ G
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + + M+ C + + L+E + AG EA + ++ I DA S
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI----DAISEYS 579
Query: 120 FIHAFCEANDIHSVFRVLDSMKR 142
F +H F +L+ ++R
Sbjct: 580 F-------KRLHRTFPLLNVLQR 595
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ R+ +M + + P HT+NM++K ++
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VW+ M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 495 VWDEMIKKGICPDDNSYTVLIRGLI-SEGKSREACRYLEEMLDKGM 539
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 81 AHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
+NS++ + K + +L EM + G +++I + AF A + + + M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEV 200
K+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNL 314
Query: 201 NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVM 260
A R+ M + PD +N++L+ L+R + A +++ M+ +G P+V +Y++M
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 261 VHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 375 IRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 414
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + + +M EP ++++ + +
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V D M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 483 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Query: 184 EWSYNAILA 192
YN A
Sbjct: 543 LIDYNKFAA 551
Score = 39.3 bits (90), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ +D K P +Y++L+RGL G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N + G
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G P + L+ + +K + + ++ ++E P++ T++++++
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
R ++DEM+++ D ++ L+ + G EA L EM G + Y+
Sbjct: 489 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 120 FIHAF 124
F F
Sbjct: 549 FAADF 553
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L
Sbjct: 254 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
EA +++++M++ DI+AHN +LE + ++ +A + M+S G P+ SY+I
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 373
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I FC+ + + + D M L P+ Y C+I +K++ Y+LL EM E+G
Sbjct: 374 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 433
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD +YNA++ ++ R+ +M + + P HT+NM++K ++
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
VW+ M K+G P ++Y+V++ GL +GK EAC+Y E M+D+G+
Sbjct: 494 VWDEMIKKGICPDDNSYTVLIRGLI-SEGKSREACRYLEEMLDKGM 538
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D +NS++ + K + +L EM + G +++I + AF A + +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
+ MK+Y V T NC++ L + + +EA L D++ ER P+ +Y +L C
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 310
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A R+ M + PD +N++L+ L+R + A +++ M+ +G P+V +Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG 304
++M+ CK+ +E A +YF+ MVD G+ P ++ L + G G
Sbjct: 371 TIMIRDFCKQSS-METAIEYFDDMVDSGLQPDAAVYTCL---ITGFG 413
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ ++ CK+ ++ A ++FD+ P Y+ L+ G G +L
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 421
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM E+ P D +N+L++ M + + +M EP ++++ + +
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ A + V D M + + P+ +Y +IR L K EA + L+EM+++G
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Query: 184 EWSYNAILA 192
YN A
Sbjct: 542 LIDYNKFAA 550
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ I+PSI+ + ++ + ++ ++ +D K P +Y++L+RGL G+
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGN 94
EA + +EML++ ++ +N + G
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M E G P + L+ + +K + + ++ ++E P++ T++++++
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
R ++DEM+++ D ++ L+ + G EA L EM G + Y+
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Query: 120 FIHAF 124
F F
Sbjct: 548 FAADF 552
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 154/296 (52%), Gaps = 7/296 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G P + + ++ CK + A D + +P V TY+ ++R L D G+L +A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLD--RMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
++ D ML+R C D++ + L+EA C+ + A +L EMR G PD +Y++ ++
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C+ + + L+ M PNV T+N I+R +C + +A +LL +M+ +G +P
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
++N ++ + C + + A+ ++ +M + P+ +YN +L + + DRA E E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M RG YP + TY+ M+ LC K GK+E+A + + +G P Y++ ++ L
Sbjct: 405 MVSRGCYPDIVTYNTMLTALC-KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 2/293 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M++ P + L+ A C+ V A + D + TP V TY++LV G+ G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA K ++M C +++ HN +L +MC G +A +L +M G P +++I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + +L+ M ++ PN +YN ++ CK +K++ A + L+ M+ RG
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN +L C +V A+ ++ +++ + P TYN V+ L + G+ +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
++ + M + P TYS +V GL ++GK++EA K+F GI P + T
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGL-SREGKVDEAIKFFHEFERMGIRPNAVT 521
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M + G P + + L++ +CK + A +F D P V T++I++R + G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A KL +ML + ++ N L+ +C+ G + A +L +M G +P++ SY+
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H FC+ + L+ M P++ TYN ++ LCK+ KVE+A ++L+++ +G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN ++ + A++L+ M +++ PD TY+ ++ L R G+ D A
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ + E+ G P+ T++ ++ GLCK + + + A + M++ G P ++ +L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSR-QTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 142/276 (51%), Gaps = 7/276 (2%)
Query: 17 LHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKC 75
L + + ++ +F +N H P + + L+RG +G+ +A K+ E+LE
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSG 167
Query: 76 PV-DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
V D++ +N ++ CKAG I+ A +L M PD +Y+ + + C++ +
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
VLD M + + P+V TY +I C++ V A +LLDEM +RG PD +YN ++
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C ++ A++ + M P+ T+N++L+ + GR+ A ++ M ++GF PSV
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
T++++++ LC +KG L A E M G P S
Sbjct: 345 VTFNILINFLC-RKGLLGRAIDILEKMPQHGCQPNS 379
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 137/264 (51%), Gaps = 8/264 (3%)
Query: 51 VRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGA 110
+R + GEL E K + M+ DI+ +L+ C+ G +A +L + GA
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
PD +Y++ I +C+A +I++ VLD R ++ P+V TYN I+R LC + K+++A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
+LD M++R PD +Y ++ C + V A++L+ M PD TYN+++ +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+ GR D A + M G P+V T+++++ +C G+ +A K M+ +G P
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSV 344
Query: 291 STVEMLRNRLVGLGFL----DIIE 310
T +L N L G L DI+E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILE 368
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 5/243 (2%)
Query: 83 NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKR 142
N+ L M + G ++E L M G PD + I FC ++L+ ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
VP+V TYN +I CK ++ A +LD M +PD +YN IL CD ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ ++ RM + + PD TY ++++ R A ++ + M RG P V TY+V+V+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
G+C K+G+L+EA K+ M G P T ++ + G ++D ++LAD + + S
Sbjct: 283 GIC-KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 322 CTI 324
++
Sbjct: 342 PSV 344
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G PS+ + L++ LC++ + A + +H P +Y+ L+ G +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A + + M+ R C DI+ +N++L A+CK G +++A +L ++ S G P +Y+
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +A ++LD M+ +L P+ TY+ ++ L + KV+EA + E G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++N+I+ C + + A+ + M P+ +Y ++++ L G A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 240 EVWESMEKRGFYPSVSTYSV 259
E+ + +G S V
Sbjct: 575 ELLNELCNKGLMKKSSAEQV 594
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 171/331 (51%), Gaps = 6/331 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE G KP I + ++ +LCK K V A FF + + P V TY+ LV GL +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A +L +M+++K +++ +++LL+A K G + EA + EM + +PD +YS
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + I ++ D M + +V +YN +I CK ++VE+ +L EM +RG
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +YN ++ +V+ A ++M + PD TYN++L L G ++A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M+KR + TY+ ++ G+CK GK+EEA F + +G+ P T + +
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 300 LVGLGFLDIIEILADKMER----STSCTIQE 326
L G L +E L KM++ CT+ +
Sbjct: 480 LCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 161/337 (47%), Gaps = 5/337 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
GI+ +Y + +++ C V +A K + P T LV G +S+
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L D+M+E DI+A+N++++++CK +++A +E+ G P+ +Y+ ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C ++ R+L M + + PNV TY+ ++ KN KV EA +L +EM+ +P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y++++ C ++ A ++ M + + D +YN ++ + R + +++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
M +RG + TY+ ++ G + G +++A ++F M GI P T +L L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFF-QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 303 LGFLD-IIEILADKMERSTSCTIQELANAMRG--KTG 336
G L+ + I D +R I +RG KTG
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L++A LF +M++ + I+ N LL A+ K D + ++M +G D ++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + +L M + P+ T ++ C+ +V +A L+D+M+E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YNAI+ C VN A + ++ + P+ TY ++ L R+ A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M K+ P+V TYS ++ K GK+ EA + FE MV I P T L N
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFV-KNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 299 RL 300
L
Sbjct: 304 GL 305
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 165 bits (417), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 5/292 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALC----KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGD 56
M E G P+++ + LL LC ++ +++ H D+ P V +Y+ ++ G
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 57 VGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFS 116
G+ +A + EML+R D++ +NS++ A+CKA +D+A +L M G PD +
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
Y+ +H +C + L M+ + P+V TY+ ++ LCKN + EA ++ D M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG P+ +Y +L + + + L+ M + + PD + +++++ + G+ D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+A V+ M ++G P+ TY ++ LC K G++E+A YFE M+DEG+ P
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILC-KSGRVEDAMLYFEQMIDEGLSP 439
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+ P + +LH C K A F + + P V TYS+L+ L G
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EARK+FD M +R +I + +LL+ G + E HG+L M G PD + +SI
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+ + + V M++ L PN TY +I LCK+ +VE+A ++MI+ G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P YN+++ C + A LI M + + +N ++ + GR +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + G P+V TY+ +++G C GK++EA K MV G+ P + T L N
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYC-LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 300 LVGLGFLDIIEILADKMERS 319
+ ++ +L +ME S
Sbjct: 556 YCKISRMEDALVLFKEMESS 575
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 43/326 (13%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVGELS 61
G SIY L++ L + + ++ A+ E TP + TY IL+ G L
Sbjct: 45 GRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLD 104
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM-LREMRSIGAEPDAFSYSIF 120
++++ VD +A LL+ +C +A + LR M +G P+ FSY+I
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164
Query: 121 IHAFCEAND-----------------------------IHSVFRVLDSMKRYN------- 144
+ C+ N I+ F+ DS K Y+
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 145 --LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
++P+V TYN II LCK + +++A ++L+ M++ G PD +YN+IL +C +
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A+ + +M + V PD TY++++ L + GR A ++++SM KRG P ++TY ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPP 288
G KG L E ++MV GI P
Sbjct: 345 GY-ATKGALVEMHGLLDLMVRNGIHP 369
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 36/359 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV GI P Y L+ A K+ V A F + + P TY ++ L G
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A F++M++ + +NSL+ +C + A ++ EM G + ++
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + ++ + M R + PNV TYN +I C K++EA +LL M+ G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y+ ++ +C + + AL L M V PD TYN++L+ L + R A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKK------------------------------- 268
E++ + + G +STY++++HGLCK K
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 269 ---GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTI 324
G+ +EA F G+ P T ++ ++G G L+ ++ L ME CT+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME-DNGCTV 719
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 15/232 (6%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC------EANDIH 131
D+ + L+ C+AG +D L + G DA +++ + C +A DI
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI- 144
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE---RGANPDEWSYN 188
VL M +PNVF+YN +++ LC + +EA +LL M + G+ PD SY
Sbjct: 145 ----VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 189 AILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKR 248
++ + + A M ++PD TYN ++ L + D+A EV +M K
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 249 GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
G P TY+ ++HG C G+ +EA + + M +G+ P T +L + L
Sbjct: 261 GVMPDCMTYNSILHGYC-SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G+KP+ L++ CK ++ A F + +P + TY+I+++GL
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A++L+ + E +++ +N +L +CK D+A M + + + + +A +++I
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A + + + LVPN +TY + + +EE QL M + G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
D N I+ R E+ A ++ + +++ + T ++ + LL
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK---ENVMPDRHTY 222
E+A + DE++ RG + N LA R A+ RM + + V PD TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALA-DVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+++ R GR D ++ K+GF ++ ++ GLC K
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADK 136
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA--HQFFDNAKHEFTPTVKTYSILVRGLGDVG 58
M E G+ P++ L+ L+ ALC+ A F + K P TY L+ GL G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ EA+KLF EM+E+ C ++ + SL+ +C + N+DEA L EM+S G EP+ F+YS
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + + M PN+ TY +I LCK +K++EA +LLD M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF--- 235
G PD Y +++ C ++ A + M + P+R T+N+ +K V R
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA 386
Query: 236 ---DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
RA ++ SM RG V T +V LC KKG+ ++A + + +V +G P T
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLC-KKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 293 VEML 296
++L
Sbjct: 446 WKLL 449
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 136/300 (45%), Gaps = 19/300 (6%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTV----KTYSILVRGLGDVGELS 61
I PS Q++ + K V+ + FD+A E+ ++ +V L +
Sbjct: 14 ITPS-----QVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKA-GNIDEAHGMLR---EMRSIGAEPDAFSY 117
A L M C V +L ++C+ G + LR +M+ +P +Y
Sbjct: 69 AAEDLIVRMKIENCVV----SEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAY 124
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE-KVEEAYQLLDEMI 176
+ E N ++ F+ +M+ L P V + N +I+ LC+N+ V+ ++ EM
Sbjct: 125 VTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 177 ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFD 236
+RG +PD ++Y +++ C ++ A +L T M +++ P TY ++ L D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 237 RATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
A E M+ +G P+V TYS ++ GLC K G+ +A + FEMM+ G P T L
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLC-KDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 42/251 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MVE P++ L++ LC K+V A ++ + K + P V TYS L+ GL G
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A +LF+ M+ R C +++ + +L+ +CK I EA +L M G +PDA Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN-------------------------- 153
I FC + LD M + PN T+N
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL 397
Query: 154 ---------------CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+++ LCK + ++A QL+DE++ G P + ++ ++ + D+
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457
Query: 199 EVNMALRLITR 209
V A + R
Sbjct: 458 IVGEASDTLLR 468
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
RV MK ++ P+ Y ++ L + ++ A++ M E G P S N ++
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 194 HC-DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
C + V+ L++ M K PD +TY ++ L R GR D A +++ M ++ P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEMLRNRLVGLGFLDI 308
+V TY+ +++GLC K ++EA +Y E M +GI P YSS ++ L L +++
Sbjct: 226 TVVTYTSLINGLCGSK-NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 309 IEILADKMERSTSCTIQELANAM 331
E++ + R T L +
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGL 307
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
+LR+ +M + P + Y VL +LV + + A + +++M + G P+V++ +V++
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTS 321
LC+ G ++ K F M G P S T L + L G +D + L +M E+ +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 322 CTIQELANAMRGKTG 336
T+ + + G G
Sbjct: 225 PTVVTYTSLINGLCG 239
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 169/312 (54%), Gaps = 4/312 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MVE + P++ + L+ K ++ + + F + P V +Y+ L+ GL + G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+SEA + D+M+ +++ +N+L+ CK + EA M ++ GA P Y++
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A+C+ I F + + M+R +VP+V TYNC+I LC+N +E A +L D++ +G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++ ++ +C + E A L+ M+K + P TYN+V+K + G AT
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 240 EVWESMEK-RGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ MEK R +V++Y+V++ G +KGKLE+A M+++G+ P T E+++
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGY-SQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 299 RLVGLGFLDIIE 310
+V GF+ IE
Sbjct: 585 EMVDQGFVPDIE 596
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 151/288 (52%), Gaps = 5/288 (1%)
Query: 4 FGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+G K S L+ AL K + V + + + + + P V T+++++ L G++++
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGN---IDEAHGMLREMRSIGAEPDAFSYSI 119
AR + ++M C +++++N+L++ CK G + +A +L+EM P+ +++I
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + +++ +V M ++ PNV +YN +I LC K+ EA + D+M+ G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YNA++ C + AL + + + +P YNM++ ++G+ D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIP 287
+ E ME+ G P V TY+ ++ GLC + G +E A K F+ + +G+P
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLC-RNGNIEAAKKLFDQLTSKGLP 468
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 80 LAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDS 139
L+ L+ A+ K + + +EM +P+ F++++ I+A C+ ++ V++
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248
Query: 140 MKRYNLVPNVFTYNCIIRKLCK---NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCD 196
MK Y PNV +YN +I CK N K+ +A +L EM+E +P+ ++N ++
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 197 RAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVST 256
+ ++++ M ++V P+ +YN ++ L G+ A + + M G P++ T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 257 YSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
Y+ +++G CK L+EA F + +G P + ML + LG +D L ++M
Sbjct: 369 YNALINGFCKND-MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 317 ER 318
ER
Sbjct: 428 ER 429
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + A S + A + N V V M R + PNVFT+N +I LCK K+ +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHC---DRAEVNMALRLITRMTKENVMPDRHTYNMV 225
++++M G +P+ SYN ++ +C ++ A ++ M + +V P+ T+N++
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+ + + +V++ M + P+V +Y+ +++GLC GK+ EA + MV G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC-NGGKISEAISMRDKMVSAG 361
Query: 286 IPPYSSTVEMLRN 298
+ P T L N
Sbjct: 362 VQPNLITYNALIN 374
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
M + G+KP + ++ CK ++K A + E V +Y++L++G G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 102
+L +A L +EMLE+ + + + + E M G + + G L
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 175/339 (51%), Gaps = 12/339 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHV-KVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G ++Y+ + LL LC+ K + ++ P V +Y+ ++RG + E
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A +L +EM C ++ L++A CKAG +DEA G L+EM+ +G E D Y+
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC+ ++ + D + P TYN +IR CK +++EA ++ + MIERG
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++Y ++ C + AL+L+ M +++ P+ TYN+++ L + G A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV------DEGIPPYSSTV 293
E+ E M+KR P TY++++ GLC KG L+EA K +M+ D + Y++ +
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 294 EML--RNRLVGLGFLDIIEILADKMERSTSCTIQELANA 330
L NRL LDI ++L +K+ T L N+
Sbjct: 432 HGLCKENRLHQA--LDIYDLLVEKLGAGDRVTTNILLNS 468
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 164/371 (44%), Gaps = 46/371 (12%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G++P++Y L+ LC K A Q + + + P TY+I++ L G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM--RSIGAEPDAFSY 117
+++A ++ + M +R+ D + +N LL +C G++DEA +L M S +PD SY
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 118 SIFIHAFCEANDIHSVFRVLD-----------------------------------SMKR 142
+ IH C+ N +H + D +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 143 YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNM 202
+V N TY +I CK + A LL +M P + YN +L+ C ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A RL M ++N PD ++N+++ ++ G A + M + G P + TYS +++
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD----IIEILADK--- 315
K G L+EA +F+ MVD G P + + + + G D +++ L DK
Sbjct: 608 RFLKL-GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Query: 316 MERSTSCTIQE 326
+++ +CT+ +
Sbjct: 667 LDKELTCTVMD 677
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 39/354 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
++E G P + L+ CK +K A + F+ + P V TY+ L+ GL VG+
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA +L + M+E+ + + +N ++ +CK G + +A ++ M+ PD +Y+I
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLV--PNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ C D+ ++L M + + P+V +YN +I LCK ++ +A + D ++E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 178 RGANPDE----------------------W-------------SYNAILAYHCDRAEVNM 202
+ D W +Y A++ C +N+
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 203 ALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVH 262
A L+ +M + P YN +L L + G D+A ++E M++ +P V ++++M+
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 263 GLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G K G ++ A M G+ P T L NR + LG+LD DKM
Sbjct: 573 G-SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 135/273 (49%), Gaps = 5/273 (1%)
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A + +MLE ++ ++ + LLE + A G+L M G + ++++I +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + +L M+R +L+P+VF+YN +IR C+ +++E+A +L +EM G +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
++ ++ C +++ A+ + M + D Y +++ G DR ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVG 302
+ + +RG P TY+ ++ G C K G+L+EA + FE M++ G+ P T L + L G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFC-KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 303 LG----FLDIIEILADKMERSTSCTIQELANAM 331
+G L ++ ++ +K E + T + N +
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ CK + VA + E P+V Y+ L+ L G L +A +LF+EM
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D+++ N +++ KAG+I A +L M G PD F+YS I+ F + +
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
D M P+ + +++ + ++ +L+ +++++ D+ ++ Y
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 195 CD-RAEVNMALRLITRMTKE 213
C+ A +++A RL+ R+T +
Sbjct: 680 CNSSANMDLAKRLL-RVTDD 698
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 71/355 (20%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P Y + L++ LCK HVK A + D E + P V TY+ ++ GL +GE+ EA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR-------------------- 103
++ D+M+ R C + + +N+L+ +CK ++EA + R
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 104 ---------------EMRSIGAEPDAFSYSIFIHA------------------------- 123
EMRS G EPD F+Y++ I +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 124 ----------FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 173
FC+AN + D M+ + + N TYN +I LCK+ +VE+A QL+D
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 174 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 233
+MI G PD+++YN++L + C ++ A ++ MT PD TY ++ L + G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 234 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
R + A+++ S++ +G + Y+ ++ GL +K+ E + EM+ PP
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 155/283 (54%), Gaps = 3/283 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M +GIKP + + L+ ALC+ ++ A D + P KT++ +++G + G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI-GAEPDAFSYS 118
L A ++ ++M+E C ++ N ++ CK G +++A ++EM + G PD ++++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
++ C+A + ++D M + P+V+TYN +I LCK +V+EA ++LD+MI R
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
+P+ +YN +++ C +V A L +T + ++PD T+N +++ L A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E++E M +G P TY++++ LC KGKL+EA + M
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLC-SKGKLDEALNMLKQM 461
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 3/290 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE--FTPTVKTYSILVRGLGDVG 58
MVEFG S ++ ++H CK V+ A F ++ F P T++ LV GL G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ A ++ D ML+ D+ +NS++ +CK G + EA +L +M + P+ +Y+
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I C+ N + + + ++P+V T+N +I+ LC A +L +EM +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PDE++YN ++ C + +++ AL ++ +M TYN ++ + + A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
E+++ ME G + TY+ ++ GLCK + ++E+A + + M+ EG P
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSR-RVEDAAQLMDQMIMEGQKP 538
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 145/325 (44%), Gaps = 40/325 (12%)
Query: 15 QLLHALCKRKHVKVAHQFFDNA--KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+LL +L + A + F+ A K F+P Y ++ LG G + +K+ ++M
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 73 RKCPV-------------------DILA-----------------HNSLLEAMCKAGNID 96
+C + +IL+ +N +L + ++
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 97 EAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCII 156
+M G +PD ++++ I A C A+ + +L+ M Y LVP+ T+ ++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 157 RKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKEN-V 215
+ + ++ A ++ ++M+E G + S N I+ C V AL I M+ ++
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD++T+N ++ L + G A E+ + M + G+ P V TY+ ++ GLC K G+++EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-KLGEVKEAV 350
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRL 300
+ + M+ P + T L + L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTL 375
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRS---------------------------------- 107
+ +L + ++G+ D+ +L +M+S
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 108 --IGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
G +PD Y+ ++ + N + V M + + P+V T+N +I+ LC+ ++
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
A +L++M G PDE ++ ++ + + +++ ALR+ +M + + N++
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 226 LKLLVRVGRFDRATEVWESMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ + GR + A + M + GF+P T++ +V+GLC K G ++ A + ++M+ E
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC-KAGHVKHAIEIMDVMLQE 324
Query: 285 GIPPYSSTVEMLRNRLVGLGFL-DIIEILADKMERSTS 321
G P T + + L LG + + +E+L + R S
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 203 ALRLITRMTKE-NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
ALRL +K+ N P+ Y +L L R G FD ++ E M+ ST+ +++
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 262 HGLCKKKGKLEEACKYFEMMVDE-GIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
+ + + +E + M+DE G+ P + + N LV L ++EI KM
Sbjct: 126 ESYAQFELQ-DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM 180
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 151/274 (55%), Gaps = 2/274 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ ALC K+V A F ++ P V TY+ L+R L + G S+A +L +M+ERK
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
+++ ++L++A K G + EA + EM +PD F+YS I+ FC + +
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+ + M + PNV TYN +I+ CK ++VEE +L EM +RG + +YN ++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ +MA ++ +M + V PD TY+++L L + G+ ++A V+E ++K P +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 501 YTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 533
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D E+ P T++ L+ GL +
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ R C D+ + +++ +CK G+ID A +L++M E D Y+
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C +++ + M + PNV TYN +IR LC + +A +LL +MIER
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M + +P+V TY+ ++ G CK K ++EE + F M G+ + T L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 300 LVGLGFLDIIEILADKM 316
L G D+ + + KM
Sbjct: 440 LFQAGDCDMAQKIFKKM 456
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TYN +I+ L + + A ++ +M+ G PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C ++ AL + + K + PD +TYN++++ + + G+ + +++
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
S+ +G P+V Y+ M+ G C +KG EEA F M ++G P S T ++R RL
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFC-RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV G +P ++ +++ LCKR + +A K + V Y+ ++ L +
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A LF EM + +++ +NSL+ +C G +A +L +M P+ ++S
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + + ++ D M + ++ P++FTY+ +I C +++++EA + + MI +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN ++ C V + L M++ ++ + TYN +++ L + G D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++++ M G P + TYS+++ GLC K GKLE+A FE + + P
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLC-KYGKLEKALVVFEYLQKSKMEP 498
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 19/289 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--------PTVKTYSILVR 52
M++ I P I+ L++ C H D AKH F P V TY+ L++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFC-------MHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G + E +LF EM +R + + +N+L++ + +AG+ D A + ++M S G P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
D +YSI + C+ + V + +++ + P+++TYN +I +CK KVE+ + L
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ +G P+ Y +++ C + A L M ++ +P+ TYN +++ +R
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
G + E+ + M GF ST S++++ L G+LE++ Y EM+
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINML--HDGRLEKS--YLEML 628
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L + M + D+ ++N L+ C+ + A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EPD + S ++ +C I ++D M PN T+N +I L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M+ RG PD ++Y ++ C R ++++AL L+ +M K + D
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y ++ L + A ++ M+ +G P+V TY+ ++ LC G+ +A + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDM 316
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS I ++ + G
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
MV+ PSI + ++LL A+ K + + ++ + + +Y+IL+ +
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A + +M++ DI+ +SLL C I EA ++ +M + +P+ +++
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH N ++D M P++FTY ++ LCK ++ A LL +M +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D Y I+ C+ VN AL L T M + + P+ TYN +++ L GR+ A+
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
+ M +R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
+ +GI P + + L++ K V +A + + +++ P V +Y+ILV G +G+
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA + +EM + + N L+ A CK I EA + REM G +PD ++++
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I CE ++I +L M +V N TYN +I + +++EA +L++EM+ +G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ DE +YN+++ C EV+ A L +M ++ P + N+++ L R G + A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E + M RG P + T++ +++GLC+ G++E+ F + EGIPP + T L +
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRA-GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 300 LVGLGFL 306
L GF+
Sbjct: 679 LCKGGFV 685
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 153/307 (49%), Gaps = 17/307 (5%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---------HEFTPTVKTYSILVRGLGDV 57
KP I + L+H V H D+AK + P V TY+ L+ G
Sbjct: 350 KPEIVIFNTLIHGF-------VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 58 GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSY 117
G + A ++ +M + C ++ ++ L++ CK G IDEA+ +L EM + G +P+ +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 118 SIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
+ I AFC+ + I + M R P+V+T+N +I LC+ ++++ A LL +MI
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
G + +YN ++ R E+ A +L+ M + D TYN ++K L R G D+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLR 297
A ++E M + G PS + +++++GLC + G +EEA ++ + MV G P T L
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLC-RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 298 NRLVGLG 304
N L G
Sbjct: 642 NGLCRAG 648
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ + L+ A CK + A + F + + P V T++ L+ GL +V E+ A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L +M+ + + +N+L+ A + G I EA ++ EM G+ D +Y+ I
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C A ++ + + M R P+ + N +I LC++ VEEA + EM+ RG+ PD
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ C + L + ++ E + PD T+N ++ L + G A + +
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKK 268
+ GF P+ T+S+++ + ++
Sbjct: 694 EGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PT K+Y++++ L A +F +ML RK P + +++A C ID A +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
LR+M G P++ Y IH+ + N ++ ++L+ M VP+ T+N +I LCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE-------- 213
+++ EA ++++ M+ RG PD+ +Y ++ C V+ A L R+ K
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 214 ------------------------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRG 249
++PD TYN ++ + G A EV M +G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
P+V +Y+++V G C K GK++EA M +G+ P
Sbjct: 420 CKPNVYSYTILVDGFC-KLGKIDEAYNVLNEMSADGLKP 457
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 13/332 (3%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M G P + ++ LCK + A + + F P TY L+ GL +G
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM-RSIGAEPDAFSYS 118
+ A+ LF R +I+ N+L+ G +D+A +L +M S G PD +Y+
Sbjct: 338 VDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ + + + VL M+ PNV++Y ++ CK K++EAY +L+EM
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ +N +++ C + A+ + M ++ PD +T+N ++ L V A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M G + TY+ +++ ++ G+++EA K MV +G P T L
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRR-GEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 299 RLVGLGFLDIIEILADKMER------STSCTI 324
L G +D L +KM R + SC I
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G KP +Y + L+ LC+ +K A D TY+ L+ GE+ EA
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
RKL +EM+ + P+D + +NSL++ +C+AG +D+A + +M G P S +I I+
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C + + M P++ T+N +I LC+ ++E+ + ++ G PD
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDR 237
++N ++++ C V A L+ ++ +P+ T++++L+ ++ DR
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 15/246 (6%)
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C ++N +LE + A + +M S P F++ + + AFC N+I S
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L M ++ VPN Y +I L K +V EA QLL+EM G PD ++N ++
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C +N A +++ RM PD TY ++ L ++GR D A +++ + K P +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEI 353
Query: 255 STYSVMVHGLCKKKGKLEEACKYF-EMMVDEGIPPYSSTVEML-----RNRLVGLGFLDI 308
++ ++HG G+L++A +M+ GI P T L + LVGL
Sbjct: 354 VIFNTLIHGFV-THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA---- 408
Query: 309 IEILAD 314
+E+L D
Sbjct: 409 LEVLHD 414
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G+KP+ Y ++ LC+ K + F + + P Y+ L+ G G++ A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K F EM R D+L + +++ C+ G++ EA + EM G EPD+ +++ I+
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+A + FRV + M + PNV TY +I LCK ++ A +LL EM + G P+
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN+I+ C + A++L+ + D TY ++ + G D+A E+ +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
M +G P++ T++V+++G C G LE+ K M+ +GI P ++T L
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFC-LHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CKR ++ A +FF + + TP V TY+ ++ G +G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KLF EM + D + L+ CKAG++ +A + M G P+ +Y+
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ D+ S +L M + L PN+FTYN I+ LCK+ +EEA +L+ E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D +Y ++ +C E++ A ++ M + + P T+N+++ G +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M +G P+ +T++ +V C + L+ A ++ M G+ P T E L
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRN-NLKAATAIYKDMCSRGVGPDGKTYENL 637
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 151/283 (53%), Gaps = 2/283 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P +L++ CK H+K A + ++ + +P V TY+ L+ GL G+L A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM + +I +NS++ +CK+GNI+EA ++ E + G D +Y+ + A
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C++ ++ +L M L P + T+N ++ C + +E+ +LL+ M+ +G P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++N+++ +C R + A + M V PD TY ++K + A +++
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
M+ +GF SVSTYSV++ G K+K K EA + F+ M EG+
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRK-KFLEAREVFDQMRREGL 697
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 152/333 (45%), Gaps = 3/333 (0%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELS 61
E G+ ++ + ++H +C+ +K AH + + +TP V +YS +V G GEL
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+ KL + M + + + S++ +C+ + EA EM G PD Y+ I
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
FC+ DI + + M ++ P+V TY II C+ + EA +L EM +G
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
PD ++ ++ +C + A R+ M + P+ TY ++ L + G D A E+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
M K G P++ TY+ +V+GLC K G +EEA K G+ + T L +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLC-KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 302 GLGFLD-IIEILADKMERSTSCTIQELANAMRG 333
G +D EIL + + + TI M G
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 150/335 (44%), Gaps = 43/335 (12%)
Query: 15 QLLHALCKRKHVKVAH---QFFD---NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFD 68
L+ + +R + V QFFD ++ + + + + L D G L EAR++F+
Sbjct: 140 SLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFE 199
Query: 69 EMLE-------------------------------RKCP-----VDILAHNSLLEAMCKA 92
+ML R+ P ++ ++N ++ +C+
Sbjct: 200 KMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL 259
Query: 93 GNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY 152
G I EAH +L M G PD SYS ++ +C ++ V+++++ MKR L PN + Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 153 NCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTK 212
II LC+ K+ EA + EMI +G PD Y ++ C R ++ A + M
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 213 ENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
++ PD TY ++ ++G A +++ M +G P T++ +++G C K G ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC-KAGHMK 438
Query: 273 EACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+A + M+ G P T L + L G LD
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G P++ L+ LCK + A++ + K P + TY+ +V GL G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA KL E D + + +L++A CK+G +D+A +L+EM G +P ++++
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN------CI------------------ 155
++ FC + ++L+ M + PN T+N CI
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 156 -----------IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
++ CK ++EA+ L EM +G + +Y+ ++ R + A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 205 RLITRMTKENVMPDRHTYNM 224
+ +M +E + D+ ++
Sbjct: 687 EVFDQMRREGLAADKEIFDF 706
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G++P+I + L++ C ++ + + P T++ LV+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ +M R D + +L++ CKA N+ EA + +EM+ G +YS+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE-- 177
I F + V D M+R L + ++ K ++ + +DE+IE
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 731
Query: 178 ------RGAN 181
RGAN
Sbjct: 732 LVDEQLRGAN 741
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M K D++ N++++++CK ++D+A + +EM + G P+ +YS
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M + PN+ T+N +I K K EA +L D+MI+R
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C ++ A ++ M ++ PD TYN ++K + R + T
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ GL G + A K F+ MV +G+PP T +L +
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + D M++S
Sbjct: 405 LCNNGKLEKALEVFDYMQKS 424
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ +LCK +HV A F + + P V TYS L+ L G S+A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+E+K +++ N+L++A K G EA + +M +PD F+Y+ I+ F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P++ TYN +I+ CK+++VE+ +L EM RG D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + A ++ +M + V PD TY+++L L G+ ++A EV++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+K + Y+ M+ G+C K GK+++ F + +G+ P
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMC-KAGKVDDGWDLFCSLSLKGVKP 463
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A Q D + + P + T++ L+ G+ EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL D+M++R DI +NSL+ C +D+A M M S PD +Y+ I
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M LV + TY +I+ L + + A ++ +M+ G PD
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ ++ AL + M K + D + Y +++ + + G+ D +++
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ GLC K+ L+EA + M ++G P S T L
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P I+ + L++ C + A Q F+ + P + TY+ L++G
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R D + + +L++ + G+ D A + ++M S G PD +YSI
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + V D M++ + +++ Y +I +CK KV++ + L + +G
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C + + A L+ +M ++ +PD TYN +++ +R G +
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ M F ST ++ + L G+L+++
Sbjct: 521 ELIREMRSCRFVGDASTIGLVANML--HDGRLDKS 553
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M ++ +N L+ C+ I A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R ++++A L+ +M + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+N ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDM 246
Query: 282 VDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
+++ I P T L + V G F++ ++ D ++RS
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K A + D+ K P + TY+ L+ G
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+++F+ M+ + C D+ +N+L++ CK+ +++ + REM G D +Y+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I D + +V M + P++ TY+ ++ LC N K+E+A ++ D M +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + Y ++ C +V+ L ++ + V P+ TYN ++ L A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ + M++ G P TY+ ++
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLI 507
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 146 VPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALR 205
+P++F +N ++ + K +K + L ++M G + + ++YN ++ C R+++++AL
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
L+ +M K P T + +L R A + + M + G+ P T++ ++HGL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
K EA + MV G P T ++ N L G +D+ L +KME +
Sbjct: 127 LHN-KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 175 MIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
M++ P + +N +L+ + ++ + L +M + + + +TYN+++ R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A + M K G+ PS+ T S +++G C K ++ +A + MV+ G P + T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFT 119
Query: 295 ML 296
L
Sbjct: 120 TL 121
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
+ EFG P++ L+ CK+ ++ A FF+ K +TY++L+ GL G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +++++M E ++ +N ++ +CK G +A + EMR G + +Y+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++ +V+D MK + PN+ TYN +I C K+ +A L ++ RG
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P +YN +++ C + + + A +++ M + + P + TY +++ R ++A
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
++ SME+ G P V TYSV++HG C KG++ EA + F+ MV++ P
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFC-IKGQMNEASRLFKSMVEKNCEP 476
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 155/296 (52%), Gaps = 1/296 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
MV+ G P + LL + FF+ K + V ++ IL++G + GE+
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++ L E+ E +++ + +L++ CK G I++A + EM +G + +Y++
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I+ + F + + M+ + PN++TYNC++ +LCK+ + ++A+Q+ DEM ERG
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ + +YN ++ C ++N A +++ +M + + P+ TYN ++ VG+ +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+ ++ RG PS+ TY+++V G C +KG A K + M + GI P T +L
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFC-RKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 160/297 (53%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E G+ P++Y + +++ LCK K A Q FD + + + TY+ L+ GL +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA K+ D+M +++ +N+L++ C G + +A + R+++S G P +Y+I
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC D +++ M+ + P+ TY +I +++ +E+A QL M E G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y+ ++ C + ++N A RL M ++N P+ YN ++ + G RA
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ + ME++ P+V++Y M+ LCK++ K +EA + E M+D GI P +S + ++
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKER-KSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 27 KVAHQFFDNAK--HEFTP--TVKT----YSILVRGLGDVGELSEARKLFDEMLERKCPVD 78
K+ QFF ++ H T T KT Y +++ L+ + F+EM++
Sbjct: 69 KIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPG 128
Query: 79 ILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLD 138
N LL + + + ++ E +S D +S+ I I CEA +I F +L
Sbjct: 129 SNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 139 SMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRA 198
+ + PNV Y +I CK ++E+A L EM + G +E +Y ++
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
Query: 199 EVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYS 258
+ +M ++ V P+ +TYN V+ L + GR A +V++ M +RG ++ TY+
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 259 VMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
++ GLC++ KL EA K + M +GI P T L + G+G L
Sbjct: 308 TLIGGLCREM-KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L ++M K D++ N++++++CK ++D+A + +EM + G P+ +YS
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C ++L M + PN+ T+N +I K K EA +L D+MI+R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++YN+++ C ++ A ++ M ++ PD TYN ++K + R + T
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ GL G + A K F+ MV +G+PP T +L +
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ + D M++S
Sbjct: 480 LCNNGKLEKALEVFDYMQKS 499
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ + + ++ +LCK +HV A F + + P V TYS L+ L G S+A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+E+K +++ N+L++A K G EA + +M +PD F+Y+ ++ F
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK+++VE+ +L EM RG D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+Y ++ + + A ++ +M + V PD TY+++L L G+ ++A EV++
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M+K + Y+ M+ G+C K GK+++ F + +G+ P
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMC-KAGKVDDGWDLFCSLSLKGVKP 538
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A Q D + + P + T++ L+ G+ EA
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+D+M++R DI +NSL+ C +D+A M M S PD +Y+ I
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + + M LV + TY +I+ L + + A ++ +M+ G PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ ++ AL + M K + D + Y +++ + + G+ D +++
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ GLC K+ L+EA + M ++G P S T L
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPNSGTYNTL 581
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 3/275 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ I P I+ + L++ C + A Q F+ + P V TY+ L++G
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R D + + +L++ + G+ D A + ++M S G PD +YSI
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C + V D M++ + +++ Y +I +CK KV++ + L + +G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C + + A L+ +M ++ +P+ TYN +++ +R G +
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ M F ST ++ + L G+L+++
Sbjct: 596 ELIREMRSCRFVGDASTIGLVANML--HDGRLDKS 628
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M + + +N L+ C+ I A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R + ++AL L+ +M + D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+N ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSDM 321
Query: 282 VDEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERS 319
+++ I P T L + V G F++ ++ D ++RS
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K A + +D+ K P + TY+ LV G
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+++F+ M+ + C D++ +N+L++ CK+ +++ + REM G D +Y+
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I D + +V M + P++ TY+ ++ LC N K+E+A ++ D M +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D + Y ++ C +V+ L ++ + V P+ TYN ++ L A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 240 EVWESMEKRGFYPSVSTYSVMV 261
+ + M++ G P+ TY+ ++
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLI 582
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL D+ +L +A LF M++ + I+ N LL A+ K D + +M+ +
Sbjct: 56 ILRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
++Y+I I+ FC + I +L M + P++ T + ++ C +++ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD ++ ++ + + A+ L+ RM + P+ TY +V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME V ++ ++ LCK + +++A F+ M +GI P
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR-HVDDALNLFKEMETKGIRP 293
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L + L G + D ++L+D +E+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y I+R + K+++A L M++ P +N +L+ + ++ + L +M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ ++ +TYN+++ R + A + M K G+ PS+ T S +++G C K ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RI 171
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A + MV+ G P + T L
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTL 196
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 4/345 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M +F +P+ L+ A H + F + + PTV ++ L+RG G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L DEM DI+ +N +++ K G +D A E+ + G +PD +Y+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+AN + + + +++ VP + YN +I K +EAY LL+ +G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ P +YN IL +V+ AL++ M K++ P+ TYN+++ +L R G+ D A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E+ +SM+K G +P+V T ++MV LCK + KL+EAC FE M + P T L +
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQ-KLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 300 LVGLGFLDIIEILADKMERSTSCTIQELANAMRGKTGFRKSRSEE 344
L +G +D + +KM S C + K F R E+
Sbjct: 457 LGKVGRVDDAYKVYEKMLDS-DCRTNSIVYTSLIKNFFNHGRKED 500
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 158/303 (52%), Gaps = 6/303 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ P + L+ + + K + F+ K F P ++YSIL+ GL G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+E +LF M E+ C +D A+N +++ CK G +++A+ +L EM++ G EP +Y
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + + + K + NV Y+ +I K +++EAY +L+E++++G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +++N++L E+N AL M + P++ TY +++ L +V +F++A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE-MMVDEGIPP---YSSTVEM 295
W+ M+K+G PS +Y+ M+ GL K G + EA F+ + G+P Y++ +E
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLA-KAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 296 LRN 298
L N
Sbjct: 807 LSN 809
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 178/402 (44%), Gaps = 72/402 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGE 59
M + G+ P++ ++ ++ LCK + + A F+ ++ TP T+ L+ GLG VG
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 60 LSEARKLFDEMLERKCPVDILAHNSL---------------------------------- 85
+ +A K++++ML+ C + + + SL
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 86 -LEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ M KAG ++ M E+++ PDA SYSI IH +A + + + SMK
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL-----------AY 193
V + YN +I CK KV +AYQLL+EM +G P +Y +++ AY
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 194 ------HCDRAEVNM------------------ALRLITRMTKENVMPDRHTYNMVLKLL 229
R E+N+ A ++ + ++ + P+ +T+N +L L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
V+ + A ++SM++ P+ TY ++++GLCK + K +A +++ M +G+ P
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR-KFNKAFVFWQEMQKQGMKPS 761
Query: 290 SSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELANAM 331
+ + + + L G + L D+ + + NAM
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ CK V A+Q + K + F PTV TY ++ GL + L EA LF+E ++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
++++ ++SL++ K G IDEA+ +L E+ G P+ ++++ + A +A +I+
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
SMK PN TY +I LCK K +A+ EM ++G P SY +++
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
+ A L R +PD YN +++ L R A ++E +RG
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 255 STYSVMVHGLCKKKGKLEEA 274
T V++ L K LE+A
Sbjct: 833 KTCVVLLDTL-HKNDCLEQA 851
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 99
F P+V T +V G +L E + M + K A+ +L+ A + D
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 100 GMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKL 159
+ ++M+ +G EP ++ I F + + S +LD MK +L ++ YN I
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 160 CKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDR 219
K KV+ A++ E+ G PDE +Y +++ C ++ A+ + + K +P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
+ YN ++ G+FD A + E +G PSV Y+ ++ L +K GK++EA K FE
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL-RKMGKVDEALKVFE 367
Query: 280 MMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
M + P ST +L + L G LD L D M+++
Sbjct: 368 EMKKDAAPNL-STYNILIDMLCRAGKLDTAFELRDSMQKA 406
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 135/296 (45%), Gaps = 5/296 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEAR 64
G PS+ + +L L K V A + F+ K + P + TY+IL+ L G+L A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L D M + ++ N +++ +CK+ +DEA M EM PD ++ I
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
+ + ++V + M + N Y +I+ + + E+ +++ +MI + +PD
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
N + E + + +PD +Y++++ L++ G + E++ S
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVEML 296
M+++G Y++++ G C K GK+ +A + E M +G P Y S ++ L
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFC-KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 5/241 (2%)
Query: 40 FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNIDEA 98
F P + ++R L DV E + ++ E CP ++NSLL M + N D
Sbjct: 61 FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPE---SYNSLLLVMARCRNFDAL 117
Query: 99 HGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
+L EM G P + + +AN + + V+ M+++ P Y +I
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 159 LCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
+ L +M E G P + ++ V+ AL L+ M ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 219 RHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
YN+ + +VG+ D A + + +E G P TY+ M+ LCK +L+EA + F
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN-RLDEAVEMF 296
Query: 279 E 279
E
Sbjct: 297 E 297
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 155/289 (53%), Gaps = 12/289 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+P + + ++ ALC K+V A F ++ P V TY+ L+R L + G S+A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK +++ ++L++A K G + EA + EM +PD F+YS I+ F
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + + + M + PNV TYN +I+ CK ++V+E +L EM +RG +
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 185 WSYNAIL-----AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ A CD A++ + +M + V+PD TY+++L L G+ + A
Sbjct: 432 VTYTTLIHGFFQARECDNAQI-----VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E +++ P + TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 534
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 146/293 (49%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TY +I + + + A + +M+ G PD
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C+ +V AL + + + + PD +TYN++++ + + G+ + +++
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P+V TY+ M+ G C +KG EEA F M +EG P S T L
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFC-RKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P + + L+H L + A D P + TY I+V GL G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + K ++ +N++++A+C N+++A + EM + G P+ +Y+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T++ +I K K+ EA +L DEMI+R
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TYN ++K + R D
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + + A F+ MV +G+ P T +L +
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-ECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ ++ + ++RS
Sbjct: 476 LCNNGKVETALVVFEYLQRS 495
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L+ LL+ C + A + + P T++ L+ GL
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ + C D++ + ++ +CK G+ID A +L++M EP Y+
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A C +++ + M + PNV TYN +IR LC + +A +LL +MIER
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E M + +P+V TY+ ++ G CK K +++E + F M G+ + T L
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAK-RVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI + +LL A+ K + + ++ + + TYSIL+ +LS A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ DI+ NSLL C I +A ++ +M +G +PD+F+++ IH
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N ++D M P++ TY ++ LCK ++ A LL +M + P
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN I+ C+ VN AL L T M + + P+ TYN +++ L GR+ A+ + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
+R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 319 ERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 1/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ L+ A K + A + +D K P + TYS L+ G
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+ +F+ M+ + C +++ +N+L++ CKA +DE + REM G + +Y+
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +A + + V M ++P++ TY+ ++ LC N KVE A + + +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN ++ C +V L ++ + V P+ TY ++ R G + A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
++ M++ G P TY+ ++ + K A
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D K P++ +S L+ + + + L ++M ++ ++ L+ C+
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EPD + + ++ FC N I ++ M P+ FT
Sbjct: 129 RSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+N +I L ++ + EA L+D M+ +G PD +Y ++ C R ++++AL L+ +M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P YN ++ L + A ++ M+ +G P+V TY+ ++ LC G+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRW 307
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + V G L E L D+M +RS I ++
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 331 MRG 333
+ G
Sbjct: 368 ING 370
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF +M++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + + VL M + P++ T N ++ C ++ +A L+ +M+E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +++N ++ + A+ L+ RM + PD TY +V+ L + G D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ + ME+ P V Y+ ++ LC K + +A F M ++GI P T L
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYK-NVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 300 CLCNYGRWSDASRLLSDMIER 320
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+ Y I + +++ A+ L M K P ++ +L + ++ +FD + E
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV-GL 303
M+ G ++ TYS++++ C++ +L A M+ G P T+ L N G
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 304 GFLDIIEILADKME---RSTSCTIQELANAMRGKTGFRKSRSEET 345
D + ++ +E + S T L + + FR +R+ E
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGL-----FRHNRASEA 205
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
+VEFG LL LCK + K+A F+ K EF K Y+IL+ G + +
Sbjct: 173 LVEFGF---------LLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRI 223
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAG----------NIDEAHGMLREMRSIGA 110
A K EM+E +++ +N LL +C+ N+ A + EMR G
Sbjct: 224 DMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGI 283
Query: 111 EPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQ 170
EPD S+SI +H + A+ + MK + P + TY +++ LC ++EEA +
Sbjct: 284 EPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEE 343
Query: 171 LLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLV 230
LL+ M+E G +P +YN + R + N A+ L +M P TYN++L +
Sbjct: 344 LLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFI 403
Query: 231 RVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYS 290
+G+ + E+W+ ++ P + +Y+ +VHGLC K+ K +EAC YF M++ G P
Sbjct: 404 NLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKE-KWKEACGYFVEMIERGFLPQK 462
Query: 291 STVEMLRNRLV 301
T E L L+
Sbjct: 463 LTFETLYKGLI 473
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 15/259 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK----------RKHVKVAHQFFDNAKHE-FTPTVKTYSI 49
M+E GI+P++ + LL+ +C+ ++V+ A + FD + P V ++SI
Sbjct: 233 MIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSI 292
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
++ + M + I + S+++ +C G ++EA +L M G
Sbjct: 293 VLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESG 352
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
P + +Y+ F + D + + MK P+ TYN ++ K+E
Sbjct: 353 ISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVK 412
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
++ D++ PD SY +++ C + + A M + +P + T+ + K L
Sbjct: 413 EIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGL 472
Query: 230 VRVGRFDRATEVWESMEKR 248
++ + W ++K+
Sbjct: 473 IQSNKM----RTWRRLKKK 487
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 4/174 (2%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI P+I ++ LC + + + +P+ TY+ + + + A
Sbjct: 317 GISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGA 376
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L+ +M C +N LL G ++ + ++++ PD SY+ +H
Sbjct: 377 MNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHG 436
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQL---LDE 174
C M +P T+ + + L ++ K+ +L LDE
Sbjct: 437 LCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDE 490
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGEL 60
+FG+K S+ L+ LL+ L + + + H F N+K F TP + T ++LV+ L ++
Sbjct: 148 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
A K+ DE+ +++ + ++L G+++ A +L EM G PDA +Y++
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +C+ V+D M++ + PN TY +IR LCK +K EA + DEM+ER
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
PD ++ C+ +V+ A L +M K N MPD + ++ L + GR A +
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
+++ EK G PS+ TY+ ++ G+C +KG+L EA + ++ M + P + T +L
Sbjct: 388 LFDEFEK-GSIPSLLTYNTLIAGMC-EKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 155/318 (48%), Gaps = 38/318 (11%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSE 62
FGI P+I+ + L+ ALCK+ ++ A++ D P + TY+ ++ G G++
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A+++ +EML+R D + L++ CK G EA ++ +M EP+ +Y + I
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 123 AFCE---ANDIHSVF----------------RVLDS----------------MKRYNLVP 147
A C+ + + ++F +V+D+ M + N +P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 148 NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLI 207
+ + +I LCK +V EA +L DE E+G+ P +YN ++A C++ E+ A RL
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 208 TRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKK 267
M + P+ TYN++++ L + G V E M + G +P+ +T+ ++ GL +K
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL-QK 482
Query: 268 KGKLEEACKYFEMMVDEG 285
GK E+A K M V G
Sbjct: 483 LGKEEDAMKIVSMAVMNG 500
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SI 108
L+R G G + ++F + + + + N+LL + + D H M + + S
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P+ F+ ++ + A C+ NDI S ++VLD + LVPN+ TY I+ +E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
++L+EM++RG PD +Y ++ +C + A ++ M K + P+ TY ++++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + + A +++ M +R F P S ++ LC+ K++EAC + M+ P
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH-KVDEACGLWRKMLKNNCMP 364
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
++ + L + L G + L D+ E+ +
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEFEKGS 396
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G P L+ CK A D+ K+E P TY +++R L +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EAR +FDEMLER D +++A+C+ +DEA G+ R+M PD S
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C+ + ++ D ++ + +P++ TYN +I +C+ ++ EA +L D+M ER
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN ++ V +R++ M + P++ T+ ++ + L ++G+ + A
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 240 EV 241
++
Sbjct: 491 KI 492
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G +P+++ + ++ +CK V+ A F+ K P TY+ ++ G G VG
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L + F+EM + C D++ +N+L+ CK G + REM+ G +P+ SYS
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ AFC+ + + M+R LVPN +TY +I CK + +A++L +EM++ G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y A++ CD + A L +M V+P+ +YN ++ V+ DRA
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ ++ RG P + Y + GLC + K+E A
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLE-KIEAA 526
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 146/328 (44%), Gaps = 17/328 (5%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
P D L L ++ A Q F K P ++ + L+ +G+ + ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
F +M+ + +N +++ MCK G+++ A G+ EM+ G PD +Y+ I F +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+ + MK P+V TYN +I CK K+ + EM G P+ S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
Y+ ++ C + A++ M + ++P+ +TY ++ ++G A + M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+ G +V TY+ ++ GLC + +++EA + F M G+ P ++ L + GF
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAE-RMKEAEELFGKMDTAGVIPNLASYNALIH-----GF- 482
Query: 307 DIIEILADKMERSTSCTIQELANAMRGK 334
+ A M+R+ EL N ++G+
Sbjct: 483 ----VKAKNMDRAL-----ELLNELKGR 501
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARK 65
+P + + L++ CK + + +F+ K + P V +YS LV G + +A K
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
+ +M + + SL++A CK GN+ +A + EM +G E + +Y+ I C
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+A + + M ++PN+ +YN +I K + ++ A +LL+E+ RG PD
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
Y + C ++ A ++ M + + + Y ++ + G + + M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF 278
++ +V T+ V++ GLCK K + +A YF
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNK-LVSKAVDYF 600
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P++ + L+H K K++ A + + K P + Y + GL + ++ A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ + +EM E + L + +L++A K+GN E +L EM+ + E ++ + I
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 124 FCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + + + + L N + +I LCK+ +VE A L ++M+++G P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D +Y +++ + + V AL L +M + + D Y ++ L + +A
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Query: 243 ESMEKRGFYP 252
E M G +P
Sbjct: 707 EEMIGEGIHP 716
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVG 58
M E I+ ++ L+ LCK K V A +F+ ++F ++ ++ GL
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
++ A LF++M+++ D A+ SL++ K GN+ EA + +M IG + D +Y+
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ N ++++A L+EMI
Sbjct: 688 SLVWGLSHCN-----------------------------------QLQKARSFLEEMIGE 712
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
G +PDE ++L H + ++ A+ L + + K ++
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
VF VL S R VP ++ + L +EEA Q +M P S N +L
Sbjct: 177 VFDVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ + R M P TYN+++ + + G + A ++E M+ RG P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 253 SVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDI 308
TY+ M+ G K G+L++ +FE M D P T L N G L I
Sbjct: 296 DTVTYNSMIDGF-GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 151/284 (53%), Gaps = 2/284 (0%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
++P + + ++ LCK KH+ A F + + P V TYS L+ L + G S+A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK D+ ++L++A K G + EA + EM +P +YS I+ F
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + ++ + M + P+V TYN +I+ CK ++VEE ++ EM +RG +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 185 WSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWES 244
+YN ++ + +MA + M + V P+ TYN +L L + G+ ++A V+E
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 245 MEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+++ P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCNLSLKGVKP 534
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 157/316 (49%), Gaps = 2/316 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P+ + L+H L A D P + TY ++V GL G+ A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L ++M + K +L +N++++ +CK ++D+A + +EM + G P+ +YS I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C R+L M + P+VFT++ +I K K+ EA +L DEM++R +P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y++++ C ++ A ++ M ++ PD TYN ++K + R + EV+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +RG + TY++++ GL + G + A + F+ MV +G+PP T L + L
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQA-GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 304 GFLDIIEILADKMERS 319
G L+ ++ + ++RS
Sbjct: 480 GKLEKAMVVFEYLQRS 495
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P+I L LL+ C K + A D + P T++ L+ GL +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M+ + C D++ + ++ +CK G+ D A +L +M EP Y+
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M+ + PNV TY+ +I LC + +A +LL +MIER
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NPD ++++A++ ++ A +L M K ++ P TY+ ++ R D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++E M + +P V TY+ ++ G CK K ++EE + F M G+ + T +L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 300 LVGLGFLDIIEILADKM 316
L G D+ + + +M
Sbjct: 441 LFQAGDCDMAQEIFKEM 457
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R I+ ++SL+ C +DEA M M S PD +Y+ I
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+ + V M + LV N TYN +I+ L + + A ++ EM+ G P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P V Y+ M+ G C +KG EEA F+ M ++G P S ++R RL
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
MV+ I PSI L++ C + A Q F+ +KH F P V TY+ L++G
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 410
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ E ++F EM +R + + +N L++ + +AG+ D A + +EM S G P+ +Y+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ C+ + V + ++R + P ++TYN +I +CK KVE+ + L + +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN +++ C + A L M ++ +P+ YN +++ +R G + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E+ + M GF ST ++ + L G+L+++
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 624
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ +S L+ + + + L ++M P + ++ L+ C+ + A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP+ + S ++ +C + I ++D M PN T+N +I L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M+ +G PD +Y ++ C R + ++A L+ +M + + P
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
YN ++ L + D A +++ ME +G P+V TYS ++ LC G+ +A + M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLLSDM 317
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS +I ++ + G
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L +A LF EM++ + I+ + LL A+ K D + +M+++G + ++YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ FC + + VL M + PN+ T + ++ C ++++ EA L+D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G P+ ++N ++ + + A+ LI RM + PD TY +V+ L + G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ ME+ P V Y+ ++ GLCK K +++A F+ M +GI P T L +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 300 CLCNYGRWSDASRLLSDMIER 320
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 157/299 (52%), Gaps = 7/299 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
EFGI + LL LC+ KHV+ A F + + EF +K ++++ G +G + E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A++ + +++ KC D++++ +++ A+ K G + +A + R M PD + I
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA-- 180
A C I V + PNV TYN +++ LCK + E+ ++L++EM +G
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSC 385
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+P++ +++ +L Y +V++ L RM K YN++ +L V+ + ++ E
Sbjct: 386 SPNDVTFSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVRE 442
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+W ME+ G P TY++ +HGL KGK+ EA YF+ M+ +G+ P T EML N+
Sbjct: 443 IWSEMERSGLGPDQRTYTIRIHGL-HTKGKIGEALSYFQEMMSKGMVPEPRT-EMLLNQ 499
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQ-FFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M FG P++ + +++ LCK + + A + F+ K TY+ L+ GL + G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++A +L +M++RK +++ +L++ K GN+ EA + +EM P+ F+Y+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ FC + + D M P+V TYN +I CK+++VE+ +L EM +G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D ++YN ++ +C ++N+A ++ RM V PD TYN++L L G+ ++A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ E ++K + TY++++ GLC+ KL+EA F + +G+ P
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTD-KLKEAWCLFRSLTRKGVKP 462
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 1/258 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MV+ I P++ L+ K ++ A + + + P V TY+ L+ G G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A+ +FD M+ + C D++ +N+L+ CK+ +++ + EM G DAF+Y+
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH +C+A ++ +V + M + P++ TYN ++ LC N K+E+A +++++ +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ D +YN I+ C ++ A L +T++ V PD Y ++ L R G A
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 240 EVWESMEKRGFYPSVSTY 257
++ M++ GF PS Y
Sbjct: 485 KLCRRMKEDGFMPSERIY 502
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M GI +Y L+H C+ + +A K F P++ T L+ G
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA L D M +++ +N+++ +CK +++ A + M G DA +Y+
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + R+L M + + PNV + +I K + EA L EMI R
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++YN+++ C + A + M + PD TYN ++ + R +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+++ M +G TY+ ++HG C+ GKL A K F MVD G+ P T +L +
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQA-GKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 300 LVGLGFLDIIEILADKMERS 319
L G ++ ++ + +++S
Sbjct: 404 LCNNGKIEKALVMVEDLQKS 423
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD--NAKHEFTPTVKTYSILVRGLGDVG 58
M+ + P+++ + L++ C + A FD +K F P V TY+ L+ G
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSK 338
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+ + KLF EM + D +N+L+ C+AG ++ A + M G PD +Y+
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I + C I +++ +++ + ++ TYN II+ LC+ +K++EA+ L + +
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLK 227
G PD +Y +++ C + A +L RM ++ MP Y+ L+
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ ++ + + + L+ +M D+ + L+ C+ + A +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G P + ++ FC+ N ++DSM + VPNV YN +I LCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
N + A ++ M ++G D +YN +++ + A RL+ M K + P+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+ ++ V+ G A +++ M +R P+V TY+ +++G C G L +A F++M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYMFDLM 315
Query: 282 VDEGIPPYSSTVEML 296
V +G P T L
Sbjct: 316 VSKGCFPDVVTYNTL 330
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D ++L + K + + ++ + + +++IL+ LS A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SLL C+ EA ++ M G P+ Y+ I+ C+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
D+++ V M++ + + TYN +I L + + +A +LL +M++R +P+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + A L M + +V+P+ TYN ++ G A +++ M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
+G +P V TY+ ++ G CK K ++E+ K F M +G+ + T L + G L
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 307 DIIEILADKM 316
++ + + ++M
Sbjct: 376 NVAQKVFNRM 385
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV G P + + L+ CK K V+ + F ++ TY+ L+ G G+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A+K+F+ M++ DI+ +N LL+ +C G I++A M+ +++ + D +Y+I
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C + + + + S+ R + P+ Y +I LC+ EA +L M E G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 180 ANPDEWSYNAILAYH 194
P E Y+ L H
Sbjct: 495 FMPSERIYDETLRDH 509
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G K I L+ C + D K + TP V +S L+ G+L EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM++R D + + SL++ CK +D+A+ ML M S G P+ +++I I+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M +V + TYN +I+ C+ K+E A +L EM+ R PD
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY +L CD E AL + ++ K + D YN+++ + + D A +++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P V TY++M+ GLC KKG L EA F M ++G P T +L +G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLC-KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 304 G 304
G
Sbjct: 576 G 576
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 6/330 (1%)
Query: 16 LLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
++ LCK + A F+ + + F + Y+ L+RG G + KL +M++RK
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
D++A ++L++ K G + EA + +EM G PD +Y+ I FC+ N +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+LD M PN+ T+N +I CK +++ +L +M RG D +YN ++
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 195 CDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSV 254
C+ ++ +A L M V PD +Y ++L L G ++A E++E +EK +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 255 STYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILAD 314
Y++++HG+C K+++A F + +G+ P T ++ L G L ++L
Sbjct: 493 GIYNIIIHGMCNAS-KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 315 KMERS----TSCTIQELANAMRGKTGFRKS 340
KME CT L A G+ KS
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 151/301 (50%), Gaps = 2/301 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP++ L+ L++ LC V A D + F P TY +++ + G+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M ERK +D + ++ +++ +CK G++D A + EM G + D Y+
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A ++L M + + P+V ++ +I K K+ EA +L EMI+RG
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD +Y +++ C +++ A ++ M + P+ T+N+++ + D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ G C + GKLE A + F+ MV + P + ++L +
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 300 L 300
L
Sbjct: 467 L 467
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++Y L +++ C+ + + +A K + P T+S L+ GL G +SEA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+E ++ N+L+ +C G + +A ++ M G +P+ +Y +
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ +L M+ + + Y+ II LCK+ ++ A+ L +EM +G D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ C + +L+ M K + PD ++ ++ V+ G+ A E+ +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M +RG P TY+ ++ G CK+ +L++A ++MV +G P T +L N
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKEN-QLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P L+ CK + A+ D P ++T++IL+ G
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +N+L++ C+ G ++ A + +EM S PD SY I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + ++ YN II +C KV++A+ L + +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C + ++ A L +M ++ P+ TYN++++ + G ++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ E +++ GF ST ++V L G+L+++ + +M+
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDML--SDGRLKKS--FLDML 620
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G+ D+ E +A LF EM + ++ + L + + D + ++M G
Sbjct: 47 GIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH 105
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ ++ SI I+ C + F + + + P+ T++ +I LC +V EA +L+
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
D M+E G P + NA++ C +V+ A+ LI RM + P+ TY VLK++ +
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
G+ A E+ ME+R YS+++ GLC K G L+ A F M +G
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFNLFNEMEIKG 277
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
K ++A L EM P ++ + + + ++ L L +M + + + +T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ R + A + K G+ P T+S +++GLC + G++ EA + + MV+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE-GRVSEALELVDRMVE 170
Query: 284 EGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
G P T+ L N L G + +L D+M
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 150/293 (51%), Gaps = 8/293 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
MVE G +P+ +L+ +CK +A + + YSI++ GL G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A LF+EM + DI+ +N+L+ C AG D+ +LR+M P+ ++S+
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +F + + ++L M + + PN TYN +I CK ++EEA Q++D MI +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++N ++ +C ++ L L M+ V+ + TYN +++ + G+ + A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYF------EMMVDEGI 286
++++ M R P + +Y +++ GLC G+LE+A + F +M +D GI
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLC-DNGELEKALEIFGKIEKSKMELDIGI 510
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G K I + L+ C + D K + +P V T+S+L+ G+L EA
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM++R + + +NSL++ CK ++EA M+ M S G +PD +++I I+
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M ++ N TYN +++ C++ K+E A +L EM+ R PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
SY +L CD E+ AL + ++ K + D Y +++ + + D A +++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G Y++M+ LC+K L +A F M +EG P T +L
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKD-SLSKADILFRKMTEEGHAPDELTYNIL 584
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P + LL+ LC V A + D + PT+ T + LV GL G+
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+S+A L D M+E + + + +L MCK+G A +LR+M + DA YSI
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + F + + M+ ++ TYN +I C + ++ +LL +MI+R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +++ ++ ++ A +L+ M + + P+ TYN ++ + R + A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M +G P + T++++++G CK ++++ + F M G+ + T L
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKAN-RIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 300 LVGLGFLDIIEILADKM 316
G L++ + L +M
Sbjct: 448 FCQSGKLEVAKKLFQEM 464
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 140/282 (49%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ GI P+ + L+ CK ++ A Q D P + T++IL+ G
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF EM R + + +N+L++ C++G ++ A + +EM S PD SY I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ ++ + +++ + ++ Y II +C KV++A+ L + +G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
D +YN +++ C + ++ A L +MT+E PD TYN++++ + A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E+ E M+ GF VST ++++ L G+L+++ + +M+
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINML--SSGELDKS--FLDML 636
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 2/309 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER 73
D+L L K F D + PTV ++ L + + L +M +
Sbjct: 58 DKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK 117
Query: 74 KCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSV 133
I + ++ C+ + A + ++ +G EPD ++ ++ C +
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 134 FRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAY 193
++D M P + T N ++ LC N KV +A L+D M+E G P+E +Y +L
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 194 HCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPS 253
C + +A+ L+ +M + N+ D Y++++ L + G D A ++ ME +GF
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 254 VSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL-DIIEIL 312
+ TY+ ++ G C G+ ++ K M+ I P T +L + V G L + ++L
Sbjct: 298 IITYNTLIGGFC-NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 313 ADKMERSTS 321
+ M+R +
Sbjct: 357 KEMMQRGIA 365
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 163/317 (51%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL 60
M ++G P ++ L +++ A FFD+ K F P V Y+ LVRG GE+
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
SEA K+F EM ++ ++ +++A+C+ G I AH + +M G P+A +++
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
+ +A V +V + MK+ P+ TYN +I C++E +E A ++L+ MI++
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATE 240
+ ++N I Y + +VN A R+ ++M + P+ TYN+++++ V D +
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLK 451
Query: 241 VWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG-IPPYSSTVEMLRNR 299
+ + M+ + P+V+TY ++V C G A K F+ MV+E + P S EM+ +
Sbjct: 452 MKKEMDDKEVEPNVNTYRLLVTMFC-GMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 300 LVGLGFLDIIEILADKM 316
L G L E L +KM
Sbjct: 511 LRRAGQLKKHEELVEKM 527
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR 106
Y+ ++ G V + A L D M R + I L+ +AG EA M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 107 SIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMK-RYNLVPNVFTYNCIIRKLCKNEKV 165
G PD ++SI I DS+K R+ P+V Y ++R C+ ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE--PDVIVYTNLVRGWCRAGEI 271
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EA ++ EM G P+ ++Y+ ++ C +++ A + M P+ T+N +
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+++ V+ GR ++ +V+ M+K G P TY+ ++ C+ + LE A K M+ +
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN-LENAVKVLNTMIKKK 390
Query: 286 IPPYSST 292
+ST
Sbjct: 391 CEVNAST 397
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 220 HTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFE 279
H YN ++ L +V +FD A + + M+ R S+ T+++++ + G EA F
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYV-RAGLASEAVHCFN 210
Query: 280 MMVDEGIPP 288
M D G P
Sbjct: 211 RMEDYGCVP 219
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ L+ LC A + D + + P V T++ L+ G+L EA
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLFDEM++R +I+ +NSL+ C +DEA + M S PD +Y+ I+
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M R LV N TY +I + + A + +M+ G +P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + K + PD +TYN++ + + + G+ + +++
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
S+ +G P V Y+ M+ G C KKG EEA F M ++G P S T L
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFC-KKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L + A + P + TY ++ GL GE
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
A L ++M + K D++ ++++++++CK ++D+A + EM + G PD F+YS
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T+N +I K K+ EA +L DEMI+R
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+P+ +YN+++ C ++ A ++ T M ++ +PD TYN ++ + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + A F+ MV +G+ P T L +
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQAS-DCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ ++ + +++S
Sbjct: 460 LCKNGKLEKAMVVFEYLQKS 479
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
G+ ++Y + +++ LC+R + A K + P++ T + L+ G +SE
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L D+M+E D + +L+ + + EA ++ M G +PD +Y I+
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C+ + +L+ M++ + +V Y+ +I LCK V++A L EM +G P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
D ++Y+++++ C+ + A RL++ M + + P+ T+N ++ + G+ A +++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ M +R P++ TY+ +++G C +L+EA + F +MV + P T L N
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHD-RLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 145/314 (46%), Gaps = 4/314 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E I P++ + L+ A K + A + FD + P + TY+ L+ G
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L EA+++F M+ + C D++ +N+L+ CKA + + + R+M G + +Y+
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH F +A+D + V M + PN+ TYN ++ LCKN K+E+A + + + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD ++YN + C +V L ++ + V PD YN ++ + G + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM---MVDEGIPPYSSTVEML 296
++ M++ G P TY+ ++ + K A EM Y +ML
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 297 RNRLVGLGFLDIIE 310
+ + GFL+++
Sbjct: 601 HDGRLDKGFLEVLS 614
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 59 ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+L EA LF EM++ + I+ + LL A+ K D +M +G + ++Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I I+ C + + +L M + P++ T N ++ C ++ EA L+D+M+E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD ++ ++ + + A+ L+ RM + PD TY V+ L + G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ MEK V YS ++ LCK + +++A F M ++GI P T L +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYR-HVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 299 RLVGLG-FLDIIEILADKMER 318
L G + D +L+D +ER
Sbjct: 284 CLCNYGRWSDASRLLSDMLER 304
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 165/323 (51%), Gaps = 3/323 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ + ++LL LCK+ VK + D K P + TY++ ++GL GE
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A ++ ++E+ D++ +N+L+ +CK EA L +M + G EPD+++Y+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I +C+ + R++ VP+ FTY +I LC + A L +E + +G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ YN ++ ++ + A +L M+++ ++P+ T+N+++ L ++G A
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ + M +G++P + T+++++HG + K+E A + ++M+D G+ P T L N
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQL-KMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 300 LVGLG-FLDIIEILADKMERSTS 321
L F D++E +E+ +
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCA 528
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEA 63
GI P +Y + + CK A + +N + V Y +V G + +E
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+LF +ML + + N LL +CK G++ E +L ++ G P+ F+Y++FI
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ ++ R++ + P+V TYN +I LCKN K +EA L +M+ G PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++YN ++A +C V +A R++ +PD+ TY ++ L G +RA ++
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
+G P+V Y+ ++ GL +G + EA + M ++G+ P T +L N L +
Sbjct: 381 EALGKGIKPNVILYNTLIKGL-SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 304 G 304
G
Sbjct: 440 G 440
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 159/317 (50%), Gaps = 8/317 (2%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P + L+ LC A F+ A + P V Y+ L++GL + G + EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L +EM E+ ++ N L+ +CK G + +A G+++ M S G PD F+++I IH
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + + +LD M + P+V+TYN ++ LCK K E+ + M+E+G P+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+++N +L C +++ AL L+ M ++V PD T+ ++ + G D A ++
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 244 SMEKR-GFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL-- 300
ME+ S TY++++H +K + A K F+ MVD + P T ++ +
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKL-NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 301 ---VGLGFLDIIEILAD 314
V LG+ ++E++ +
Sbjct: 650 TGNVNLGYKFLLEMMEN 666
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
++E G KP + + L++ LCK + A + +E P TY+ L+ G G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A ++ + + D + SL++ +C G + A + E G +P+ Y+
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I I ++ + M L+P V T+N ++ LCK V +A L+ MI +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +++N ++ + + ++ AL ++ M V PD +TYN +L L + +F+
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E +++M ++G P++ T+++++ LC+ + KL+EA E M ++ + P + T L +
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYR-KLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 300 LVGLGFLDIIEILADKMERS 319
G LD L KME +
Sbjct: 576 FCKNGDLDGAYTLFRKMEEA 595
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 1/251 (0%)
Query: 46 TYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREM 105
Y ++ G G++ EA +F+ M C + ++N+++ + +G D+AH + M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 106 RSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKV 165
R G PD +S++I + +FC+ + H+ R+L++M NV Y ++ +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 166 EEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
E Y+L +M+ G + ++N +L C + +V +L+ ++ K V+P+ TYN+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 226 LKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
++ L + G D A + + ++G P V TY+ +++GLCK K +EA Y MV+EG
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS-KFQEAEVYLGKMVNEG 316
Query: 286 IPPYSSTVEML 296
+ P S T L
Sbjct: 317 LEPDSYTYNTL 327
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ G P I+ + L+H + ++ A + D + P V TY+ L+ GL +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + + M+E+ C ++ N LLE++C+ +DEA G+L EM++ PDA ++
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 120 FIHAFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I FC+ D+ + + M+ Y + + TYN II + V A +L EM++R
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
PD ++Y ++ C VN+ + + M + +P T V+ L R A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 239 TEVWESMEKRGFYP 252
+ M ++G P
Sbjct: 692 AGIIHRMVQKGLVP 705
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV +Y+ ++ L D G +A K++ M +R D+ + +++ CK A +
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L M S G E + +Y + F E N + + M + + T+N ++R LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
V+E +LLD++I+RG P+ ++YN + C R E++ A+R++ + ++ PD T
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
YN ++ L + +F A M G P TY+ ++ G CK
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G+ P +Y + LL+ LCK K V + + P + T++IL+ L +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMR-SIGAEPDAFSYS 118
L EA L +EM + D + +L++ CK G++D A+ + R+M + +Y+
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I IHAF E ++ ++ M L P+ +TY ++ CK V Y+ L EM+E
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
G P + ++ C V A +I RM ++ ++P+
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK--HEFTPTVKTYSILVRGLGDVGELSEA 63
+ P L+ CK + A+ F + ++ + + TY+I++ + ++ A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KLF EM++R D + +++ CK GN++ + L EM G P + I+
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRK 158
C + ++ ++ M + LVP C + K
Sbjct: 682 LCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDK 716
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIER-GANPDEWSYNAILAYHCDRAEVNMALRLITR 209
TY +I KL K E ++L +M E G + E Y + + + +V A+ + R
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCK 266
M + P +YN ++ +LV G FD+A +V+ M RG P V ++++ + CK
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +I + L+ C + D K + P V T+S+L+ G+L EA
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L EM+ R D + + SL++ CK ++D+A+ M+ M S G +P+ +++I I+
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C+AN I + M +V + TYN +I+ C+ K+ A +L EM+ R P+
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y +L CD E AL + ++ K + D YN+++ + + D A +++
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
S+ +G P V TY++M+ GLC KKG L EA F M ++G P T +L +G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLC-KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 304 G 304
G
Sbjct: 592 G 592
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVA----------------------------HQF 32
MVE+G +P+ +L+ +CK +A H
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 33 FDNAKHEF--------TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
DNA + F T + TY+IL+ G + G + KL +M++RK +++ +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
L+++ K G + EA + +EM G PD +Y+ I FC+ N + +++D M
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PN+ T+N +I CK ++++ +L +M RG D +YN ++ C+ ++N+A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L M V P+ TY ++L L G ++A E++E +EK + Y++++HG+
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
C K+++A F + +G+ P T ++ L G L E+L KME
Sbjct: 519 CNAS-KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + ++ L++ LC A D ++ P TY ++ + G+
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A +L +M ER +D + ++ +++ +CK G++D A + EM G + +Y+I
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I FC A ++L M + + PNV T++ +I K K+ EA +L EMI RG
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y +++ C ++ A +++ M + P+ T+N+++ + R D
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M RG TY+ ++ G C+ GKL A + F+ MV +PP T ++L +
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCEL-GKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 300 LVGLG 304
L G
Sbjct: 483 LCDNG 487
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI ++Y L +++ C+ + + +A K + P T+S L+ GL G +SEA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L D M+E D++ N+L+ +C +G EA ++ +M G +P+A +Y ++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C++ +L M+ N+ + Y+ II LCK+ ++ A+ L +EM +G +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN ++ C+ + +L+ M K + P+ T+++++ V+ G+ A E+ +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M RG P TY+ ++ G CK+ L++A + ++MV +G P T +L N
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKEN-HLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
+++ G +P+ L++ LC V A + D + P + T + LV GL G+
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+EA L D+M+E C + + + +L MCK+G A +LR+M + DA YSI
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + F + + M+ + N+ TYN +I C + ++ +LL +MI+R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++ ++ ++ A L M + PD TY ++ + D+A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++ + M +G P++ T++++++G CK ++++ + F M G+ + T L
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKAN-RIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 300 LVGLGFLDIIEILADKM 316
LG L++ + L +M
Sbjct: 448 FCELGKLNVAKELFQEM 464
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P L+ CK H+ A+Q D P ++T++IL+ G
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + +LF +M R D + +N+L++ C+ G ++ A + +EM S P+ +Y I
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + ++ YN II +C KV++A+ L + +G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P +YN ++ C + ++ A L +M ++ PD TYN++++ + G ++
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
++ E +++ GF ST +++ L G+L+++ + +M+
Sbjct: 599 KLIEELKRCGFSVDASTIKMVIDML--SDGRLKKS--FLDML 636
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
PTV +S L + + L +M + ++ + ++ C+ + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
+ ++ +G EP+ ++S I+ C + ++D M P++ T N ++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D+M+E G P+ +Y +L C + +A+ L+ +M + N+ D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y++++ L + G D A ++ ME +G ++ TY++++ G C G+ ++ K M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC-NAGRWDDGAKLLRDM 324
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFL 306
+ I P T +L + V G L
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKL 349
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 50 LVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIG 109
L GL D+ + +A LF +M+ + ++ + L A+ K D + ++M G
Sbjct: 60 LRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 110 AEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAY 169
+ ++ SI I+ FC + F + + + PN T++ +I LC +V EA
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 170 QLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLL 229
+L+D M+E G PD + N ++ C + A+ LI +M + P+ TY VL ++
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 230 VRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPY 289
+ G+ A E+ ME+R YS+++ GLC K G L+ A F M +GI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC-KHGSLDNAFNLFNEMEMKGITTN 297
Query: 290 SSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T +L G + D ++L D ++R
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G KP + L+H L A D + P + TY +V GL G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L +M + K D++ +N++++ +CK ++D+A + EM + G PD F+YS
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T++ +I K K+ EA +L DEMI+R
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TY+ ++K + R +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + A F+ MV G+ P T +L +
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-DCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 300 LVGLGFLDIIEILADKMERST 320
L G L ++ + ++RST
Sbjct: 478 LCKNGKLAKAMVVFEYLQRST 498
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P I L LL+ C K + A D + + P T++ L+ GL +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D+M++R C D++ + +++ +CK G+ID A +L++M E D Y+
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C+ + + M + P+VFTY+ +I LC + +A +LL +MIER
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ +++A++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E M + +P+V TYS ++ G CK K ++EE + F M G+ + T L
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAK-RVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
GI+P ++ L+ LC A + D + + P V T+S L+ G+L EA
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +YS I
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A + + M + LV N TY +I + + A + +M+ G +P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + PD +TYN++++ + + G+ + E++
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE-MLRNRL 300
++ +G P+V Y+ M+ G C +KG EEA + M ++G P S T ++R RL
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFC-RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 141/282 (50%), Gaps = 17/282 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--------PTVKTYSILVR 52
M++ I P I+ L++ C H D AKH F P V TYS L++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFC-------MHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 53 GLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEP 112
G + E +LF EM +R + + + +L+ +A + D A + ++M S+G P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 113 DAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL 172
+ +Y+I + C+ + V + ++R + P+++TYN +I +CK KVE+ ++L
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 173 DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRV 232
+ +G +P+ +YN +++ C + A L+ +M ++ +P+ TYN +++ +R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 233 GRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
G + + E+ + M GF ST ++ + L G+L+++
Sbjct: 587 GDREASAELIKEMRSCGFAGDASTIGLVTNML--HDGRLDKS 626
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
F D K P++ ++ L+ + + + L ++M D+ ++ + C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EPD + S ++ +C + I ++D M P+ FT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ +I L + K EA L+D+M++RG PD +Y ++ C R ++++AL L+ +M
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K + D YN ++ L + D A ++ M+ +G P V TYS ++ LC G+
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC-NYGRW 309
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANA 330
+A + M++ I P T L + V G L E L D+M +RS I ++
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 331 MRG 333
+ G
Sbjct: 370 ING 372
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI + ++LL A+ K ++ + + + + TYSI + +LS A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ DI+ +SLL C + I +A ++ +M +G +PD F+++ IH
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
N ++D M + P++ TY ++ LCK ++ A LL +M + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
YN I+ C ++ AL L T M + + PD TY+ ++ L GR+ A+ + M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTV 293
+R P+V T+S ++ K+GKL EA K ++ M+ I P YSS +
Sbjct: 321 ERKINPNVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL L D+ ++ +A LF +M++ + I+ N LL A+ K + + +M+++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G D ++YSIFI+ FC + + VL M + P++ T + ++ C ++++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD +++ ++ + + A+ L+ +M + PD TY V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + + MEK V Y+ ++ GLCK K +++A F M ++GI P
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK-HMDDALNLFTEMDNKGIRP 291
Query: 289 YSSTVEMLRNRLVGLG-FLDIIEILADKMER 318
T L + L G + D +L+D +ER
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 2/285 (0%)
Query: 5 GIKPSIYDLDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P +Y + +++ LCK K+ + F + + +P TY L+ G++ E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
K+F +M R D++ +S++ ++GN+D+A ++ G PD Y+I I
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+C I + + M + +V TYN I+ LCK + + EA +L +EM ER PD
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
++ ++ HC + A+ L +M ++ + D TYN +L +VG D A E+W
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M + P+ +YS++V+ LC KG L EA + ++ M+ + I P
Sbjct: 540 DMVSKEILPTPISYSILVNALC-SKGHLAEAFRVWDEMISKNIKP 583
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 4/291 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G + + +LH LCKRK + A + F+ + P T +IL+ G +G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A +LF +M E++ +D++ +N+LL+ K G+ID A + +M S P SYSI
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
++A C + FRV D M N+ P V N +I+ C++ + L++MI G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE--NVMPDRHTYNMVLKLLVRVGRFDR 237
PD SYN ++ ++ A L+ +M +E ++PD TYN +L R +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 238 ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
A V M +RG P STY+ M++G + L EA + + M+ G P
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQD-NLTEAFRIHDEMLQRGFSP 725
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 162/349 (46%), Gaps = 39/349 (11%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G S++DL L+ + + ++ AH+ F + + FT ++ + L+ L +G + A
Sbjct: 162 GSNDSVFDL--LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++ E+ +++ N ++ A+CK G +++ L +++ G PD +Y+ I A
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
+ + F ++++M P V+TYN +I LCK+ K E A ++ EM+ G +PD
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y ++L C + +V ++ + M +V+PD ++ ++ L R G D+A +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 244 SMEKRGFYP-----------------------------------SVSTYSVMVHGLCKKK 268
S+++ G P V TY+ ++HGLCK+K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
L EA K F M + + P S T+ +L + LG L L KM+
Sbjct: 460 -MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
M E I+ + + LL K + A + + D E PT +YSILV L G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+EA +++DEM+ + ++ NS+++ C++GN + L +M S G PD SY+
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 120 FIHAFCEANDIHSVFRVLDSMK--RYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIE 177
I+ F ++ F ++ M+ + LVP+VFTYN I+ C+ +++EA +L +MIE
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 178 RGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
RG NPD +Y ++ + + A R+ M + PD
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 149/334 (44%), Gaps = 39/334 (11%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
+ P + ++ + ++ A +F++ K P Y+IL++G G +S A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
L +EML++ C +D++ +N++L +CK + EA + EM PD+++ +I I
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 125 CEANDIHSVFRVLDSMKR---------YN--------------------------LVPNV 149
C+ ++ + + MK YN ++P
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 150 FTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITR 209
+Y+ ++ LC + EA+++ DEMI + P N+++ +C + + +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 210 MTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM--EKRGFYPSVSTYSVMVHGLCKK 267
M E +PD +YN ++ VR +A + + M E+ G P V TY+ ++HG C++
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 268 KGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+++EA M++ G+ P ST + N V
Sbjct: 671 N-QMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 158/335 (47%), Gaps = 6/335 (1%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ ++Y L+ +++ALCK ++ F + + P + TY+ L+ G + EA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+L + M + + +N+++ +CK G + A + EM G PD+ +Y +
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+ D+ +V M+ ++VP++ ++ ++ ++ +++A + + E G PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
Y ++ +C + +++A+ L M ++ D TYN +L L + A +++
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGL 303
M +R +P T ++++ G C K G L+ A + F+ M ++ I T L + +
Sbjct: 470 EMTERALFPDSYTLTILIDGHC-KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 304 GFLDII-EILADKMER---STSCTIQELANAMRGK 334
G +D EI AD + + T + L NA+ K
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 22/273 (8%)
Query: 33 FDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER-----------------KC 75
F N KH ILVR G LS+A+ M+ R C
Sbjct: 106 FPNFKHTSLSLSAMIHILVRS----GRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161
Query: 76 PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFR 135
+ + L+ +A + EAH +RS G + + I + + +
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 136 VLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHC 195
V + R + NV+T N ++ LCK+ K+E+ L ++ E+G PD +YN +++ +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 196 DRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVS 255
+ + A L+ M + P +TYN V+ L + G+++RA EV+ M + G P +
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 256 TYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
TY ++ C KKG + E K F M + P
Sbjct: 342 TYRSLLMEAC-KKGDVVETEKVFSDMRSRDVVP 373
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 162/344 (47%), Gaps = 52/344 (15%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGE 59
M+ G+ PS+ L+H++CK ++ A +F D + P +TY+ LV G G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++EA ++ EM + ++ +N+L+ C G +++A +L +M+ G PD SYS
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ FC + D+ RV M + P+ TY+ +I+ C+ + +EA L +EM+ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVL------------- 226
PDE++Y A++ +C ++ AL+L M ++ V+PD TY++++
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 227 KLLVRV-------------------------------------GRFDRATEVWESMEKRG 249
+LL+++ G A +V+ESM +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 250 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 293
P + Y++M+HG C + G + +A ++ MV G ++ TV
Sbjct: 636 HKPDGTAYNIMIHGHC-RAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 148/295 (50%), Gaps = 2/295 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P++ + L+ CK + + + + A P + +Y++++ GL G + E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM R +D + +N+L++ CK GN +A M EM G P +Y+ IH+
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
C+A +++ LD M+ L PN TY ++ + + EAY++L EM + G +P
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YNA++ HC ++ A+ ++ M ++ + PD +Y+ VL R D A V
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
M ++G P TYS ++ G C+++ + +EAC +E M+ G+PP T L N
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQR-RTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 3/286 (1%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSE 62
G P + + +L A + ++++ A F + + + +P V TY+IL+RG G +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A LFD+M + C +++ +N+L++ CK ID+ +LR M G EP+ SY++ I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + V VL M R + TYN +I+ CK +A + EM+ G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+Y +++ C +N A+ + +M + P+ TY ++ + G + A V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
M GF PSV TY+ +++G C GK+E+A E M ++G+ P
Sbjct: 404 REMNDNGFSPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSP 448
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 5/266 (1%)
Query: 37 KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK-CPVDILAHNSLLEAMCKAGNI 95
+H TP+V TY+ L+ + G ++ A + D+M R CP + + +L++ + G +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE-RTYTTLVDGFSQKGYM 396
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
+EA+ +LREM G P +Y+ I+ C + VL+ MK L P+V +Y+ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
+ C++ V+EA ++ EM+E+G PD +Y++++ C++ A L M + +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
PD TY ++ G ++A ++ M ++G P V TYSV+++GL K+ E
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 276 KYFEMMVDEGIPP---YSSTVEMLRN 298
++ +E +P Y + +E N
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 51/292 (17%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M + G PS+ + L++ C ++ A ++ K + +P V +YS ++ G +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA ++ EM+E+ D + ++SL++ C+ EA + EM +G PD F+Y+
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTY--------------------------- 152
I+A+C D+ ++ + M ++P+V TY
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 153 -------------NC----------IIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
NC +I+ C + EA Q+ + M+ + PD +YN
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
++ HC ++ A L M K + T ++K L + G+ + V
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 16/234 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+ G+ P + L++A C ++ A Q + + P V TYS+L+ GL
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 60 LSEARKLFDEML-ERKCPVDILAHN--------------SLLEAMCKAGNIDEAHGMLRE 104
EA++L ++ E P D+ H SL++ C G + EA +
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 105 MRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK 164
M +PD +Y+I IH C A DI + + M + + + T +++ L K K
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 165 VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPD 218
V E ++ ++ + ++ + +++ L ++ M K+ +P+
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEK-VEEAYQLLDEM 175
+ + + ++ + I ++ + + +P V +YN ++ ++++ + A + EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 176 IERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRF 235
+E +P+ ++YN ++ C +++AL L +M + +P+ TYN ++ ++ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 236 DRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
D ++ SM +G P++ +Y+V+++GLC ++G+++E
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLC-REGRMKEV 294
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
+++V+K R+ D+A + + GF P V +Y+ ++ + K + A F+ M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKME 317
++ + P T +L G +D+ L DKME
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 38/347 (10%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEA 63
GI +IY L+ +++ C+ A+ K + P T++ L++GL G++SEA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
L D M+E C D++ +NS++ +C++G+ A +LR+M + D F+YS I +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK---------------------- 161
C I + + M+ + +V TYN ++R LCK
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 162 -------------NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLIT 208
K++EA +L EMI RG +P+ +YN ++ +C + ++ A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 209 RMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
M + PD T+ ++K V R D +V+ ++ KRG + TYS++V G C +
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QS 416
Query: 269 GKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD-IIEILAD 314
GK++ A + F+ MV G+ P T +L + L G L+ +EI D
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 6/335 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M E +K ++ ++ +LC+ + A F + + +V TY+ LVRGL G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
++ L +M+ R+ +++ N LL+ K G + EA+ + +EM + G P+ +Y+
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ +C N + +LD M R P++ T+ +I+ C ++V++ ++ + +RG
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y+ ++ C ++ +A L M V+PD TY ++L L G+ ++A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++E ++K + Y+ ++ G+CK GK+E+A F + +G+ P T ++ +
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKG-GKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 300 LVGLGFLDIIEILADKMERS----TSCTIQELANA 330
L G L IL KME CT L A
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 132/265 (49%), Gaps = 1/265 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+ GI P+I + L+ C + + A+ D +++ +P + T++ L++G V
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ + K+F + +R + + ++ L++ C++G I A + +EM S G PD +Y I
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+ C+ + + + +++ + + Y II +CK KVE+A+ L + +G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +Y +++ C + ++ A L+ +M ++ P+ TYN +++ +R G +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGL 264
++ E M+ GF S+ +++ L
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 8/282 (2%)
Query: 30 HQFFDNAKHEFTPTVKTYSILVR-----GLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
FF + + +F+ ++ ++ R G+ D+ + +A LF EM+ + ++ +
Sbjct: 36 SSFFSSCERDFS-SISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSR 93
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
A+ + + +++ G + ++ +I I+ FC + VL + +
Sbjct: 94 FFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
P+ T+N +I+ L KV EA L+D M+E G PD +YN+I+ C + ++AL
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ +M + NV D TY+ ++ L R G D A +++ ME +G SV TY+ +V GL
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 265 CKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFL 306
C K GK + + MV I P T +L + V G L
Sbjct: 274 C-KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGE 59
M++FG +P + + L++ C+ V A + F P V Y+ ++ G +G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+++A +LFD M D + +NSL+ +C +G +A ++R+M P+ +++
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M R + P+VFTYN +I LC + +V+EA Q+LD M+ +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +YN ++ C V+ +L M + ++ D TYN +++ + GR D A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
E++ M+ R P++ TYS++++GLC ++E+A FE M
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLC-MNWRVEKALVLFENM 407
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 5 GIKPSIYDLDQLLHALC-KRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++ + L+ LC + A D + P V T++ ++ G+ SEA
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL++EM R D+ +NSL+ +C G +DEA ML M + G PD +Y+ I+
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + ++ M + LV + TYN II+ + + + A ++ M R P+
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+Y+ +L C V AL L M K + D TYN+V+ + ++G + A +++
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
S+ +G P V +Y+ M+ G C+K+ + +++ + M ++G+ P
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKR-QWDKSDLLYRKMQEDGLLP 484
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 78 DILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVL 137
D+ ++N ++ +C+ A ++ +M G EPD + S I+ FC+ N + ++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 138 DSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDR 197
M+ P+V YN II CK V +A +L D M G D +YN+++A C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+ A RL+ M +++P+ T+ V+ + V+ G+F A +++E M +R P V TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ +++GLC G+++EA + ++MV +G P T L N
Sbjct: 283 NSLINGLC-MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D ++L + K K+ + F + + + +Y+I++ L A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ D++ +SL+ C+ + +A ++ +M +G PD Y+ I C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
++ + D M+R + + TYN ++ LC + + +A +L+ +M+ R P+ +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + + A++L MT+ V PD TYN ++ L GR D A ++ + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGI 286
+G P V TY+ +++G CK K +++E K F M G+
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSK-RVDEGTKLFREMAQRGL 345
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L E LF +M++ + I+ + +L + K+ N D + M G D +SY+I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + V+ M ++ P+V T + +I C+ +V +A L+ +M E G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD YN I+ C VN A+ L RM ++ V D TYN ++ L GR+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
+ M R P+V T++ ++ K+GK EA K +E M + P T L N
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFV-KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 300 LVGLGFLDIIEILADKM 316
L G +D + + D M
Sbjct: 289 LCMHGRVDEAKQMLDLM 305
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
N++E + +M P +S + ++ + V + M+ + ++++YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LC+ + A ++ +M++ G PD + ++++ C V A+ L+++M +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
PD YN ++ ++G + A E+++ ME+ G TY+ +V GLC G+ +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC-CSGRWSD 227
Query: 274 ACKYFEMMVDEGIPP 288
A + MV I P
Sbjct: 228 AARLMRDMVMRDIVP 242
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 166/351 (47%), Gaps = 36/351 (10%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M+E + P+IY +++++ CK +V+ A+Q+ + P TY+ L+ G +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L A K+F+EM + C + +A+ L+ +C A IDEA + +M+ P +Y++
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C + ++ M+ + PN+ TY +I LC K E+A +LL +M+E+G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 180 ANPDEWSYNAILAYHCDR----------------------------------AEVNMALR 205
P+ +YNA++ +C R + V+ A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 206 LITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLC 265
++ +M + V+PD TYN ++ R G FD A + M RG P TY+ M+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 266 KKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM 316
K K ++EEAC F+ + +G+ P L + G +D ++ +KM
Sbjct: 509 KSK-RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 158/299 (52%), Gaps = 7/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M+E G+ P++ + L++ CKR ++ A + + +P +TY+ L++G
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ +A + ++MLERK D++ +NSL++ C++GN D A+ +L M G PD ++Y+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C++ + + DS+++ + PNV Y +I CK KV+EA+ +L++M+ +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ ++NA++ C ++ A L +M K + P T +++ L++ G FD A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP----YSSTVE 294
++ M G P TY+ + C ++G+L +A M + G+ P YSS ++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYC-REGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 44 VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 103
+ Y+ L+ L G + E ++++ EMLE K +I +N ++ CK GN++EA+ +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 104 EMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNE 163
++ G +PD F+Y+ I +C+ D+ S F+V + M N Y +I LC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 164 KVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYN 223
+++EA L +M + P +Y ++ C + AL L+ M + + P+ HTY
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 224 MVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVD 283
+++ L +F++A E+ M ++G P+V TY+ +++G C K+G +E+A E+M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDAVDVVELMES 421
Query: 284 EGIPPYSST 292
+ P + T
Sbjct: 422 RKLSPNTRT 430
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 19/350 (5%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+E + P + + L+ C+ + A++ P TY+ ++ L
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA LFD + ++ +++ + +L++ CKAG +DEAH ML +M S P++ +++
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
IH C + + + M + L P V T +I +L K+ + AY +M+ G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
PD +Y + +C + A ++ +M + V PD TY+ ++K +G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLC-----KKKGKLEEAC------------KYFEMMV 282
+V + M G PS T+ ++ L K+KG E C + E MV
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 283 DEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTSCTIQELA-NAM 331
+ + P + + E L + +G L + E + D M+R+ + EL NA+
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 152/330 (46%), Gaps = 24/330 (7%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGE----LSE 62
K S+Y LL L +V V K ++++ VG+ L
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVV--------------FKIRLLMIKSCDSVGDALYVLDL 165
Query: 63 ARKLF-DEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
RK+ DE E K + I +N+LL ++ + G +DE + EM P+ ++Y+ +
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
+ +C+ ++ + + + L P+ FTY +I C+ + ++ A+++ +EM +G
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
+E +Y ++ C ++ A+ L +M + P TY +++K L R A +
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
+ ME+ G P++ TY+V++ LC + K E+A + M+++G+ P T L N
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLC-SQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 302 GLGFL----DIIEILADKMERSTSCTIQEL 327
G + D++E++ + + T EL
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 139/316 (43%), Gaps = 21/316 (6%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT-PTVKTYSILVRGLGDVGE 59
MV+ G++P++ L+H L K A+ F T P TY+ ++ G
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L +A + +M E D+ ++SL++ G + A +L+ MR G EP ++
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 120 FIHAFCEAN------------------DIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
I E + +V +L+ M +++ PN +Y +I +C+
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 162 NEKVEEAYQLLDEMI-ERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
+ A ++ D M G +P E +NA+L+ C + N A +++ M +P
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
+ +++ L + G +R T V++++ + G+Y + +++ G+ K+G +E + F +
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV-GKQGLVEAFYELFNV 891
Query: 281 MVDEGIPPYSSTVEML 296
M G S T +L
Sbjct: 892 MEKNGCKFSSQTYSLL 907
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Query: 2 VEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELS 61
+ +P I + LL ALCK VK +H P T+++L G V +
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAE---PDAFSYS 118
+A KL +EM+E + + + ++ C+AG +DEA + M + G+ P A +++
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
+ I A + + F ++ M +P+V TY +I +C EKV+EAY+ LDEM +
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRA 238
G PD +YN L C+ + + AL+L RM + P TYNM++ + + D A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 239 TEVWESMEKRGFYPSVSTYSVMVHGL--CKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
W M+KR V TY M++GL C + +EAC E +V++G+ +
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRA---KEACFLLEEVVNKGLKLPYRVFDSF 522
Query: 297 RNRLVGLGFLDIIEILADKMER 318
RL +G L I +++ M++
Sbjct: 523 LMRLSEVGNLKAIHKVSEHMKK 544
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 36/180 (20%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ G P + ++ +C + V A++F D ++ + P + TY+ +R L + +
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
EA KL+ M+E +C P +Y++
Sbjct: 427 TDEALKLYGRMVESRCA-----------------------------------PSVQTYNM 451
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F E +D F M + + V +V TY +I L + +EA LL+E++ +G
Sbjct: 452 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEA 63
G P I + L LC+ + A + + + P+V+TY++L+ ++ + A
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
+ EM +R C D+ + +++ + EA +L E+ + G + + F+
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 525
Query: 124 FCEANDIHSVFRVLDSMKRY 143
E ++ ++ +V + MK++
Sbjct: 526 LSEVGNLKAIHKVSEHMKKF 545
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 1/269 (0%)
Query: 13 LDQLLHALCKR-KHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEML 71
L L+ LCK KH K +F F +T + L+ GL + G+L EA ++ E+L
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 72 ERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIH 131
R C +D +++N+L+ C +DEA L EM G +PD ++YSI I N +
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605
Query: 132 SVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAIL 191
+ D KR ++P+V+TY+ +I CK E+ EE + DEM+ + P+ YN ++
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 192 AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFY 251
+C ++MAL L M + + P+ TY ++K + + R + A ++E M G
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725
Query: 252 PSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
P+V Y+ ++ G K ++ C EM
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREM 754
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G+ P +Y ++A CK V+ A + F + P V T++ ++ GLG G EA
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++M+ER ++ ++ L++ + +A I +A+ +L+EM G P+ Y+ I +
Sbjct: 328 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 387
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
F EA ++ + D M L TYN +I+ CKN + + A +LL EM+ G N +
Sbjct: 388 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 447
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+ S+ +++ C + ALR + M N+ P ++ L + G+ +A E+W
Sbjct: 448 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 507
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
+GF T + ++HGLC + GKL+EA
Sbjct: 508 QFLNKGFVVDTRTSNALLHGLC-EAGKLDEA 537
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 37/324 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGE 59
MVE G++P++ L+ L + K + A+ + K F P V Y+ L+ + G
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L++A ++ D M+ + + +N+L++ CK G D A +L+EM SIG + S++
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVP-------------------------------- 147
I C S R + M N+ P
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 148 ---NVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+ T N ++ LC+ K++EA+++ E++ RG D SYN +++ C + +++ A
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+ M K + PD +TY++++ L + + + A + W+ ++ G P V TYSVM+ G
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
CK + + EE ++F+ M+ + + P
Sbjct: 634 CKAE-RTEEGQEFFDEMMSKNVQP 656
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 14 DQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+ L+ C +K + A F D K P TYSIL+ GL ++ ++ EA + +D+
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
D+ ++ +++ CKA +E EM S +P+ Y+ I A+C + +
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILA 192
+ + MK + PN TY +I+ + +VEEA L +EM G P+ + Y A++
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 193 YHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYP 252
+ ++ L+ M +NV P++ TY +++ R G A+ + M ++G P
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796
Query: 253 SVSTYSVMVHGLCKKKGKLE 272
TY ++G K+ G LE
Sbjct: 797 DSITYKEFIYGYLKQGGVLE 816
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
MV+ G+KP Y L+ L V+ A QF+D+ K P V TYS+++ G
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
E ++ FDEM+ + + + +N L+ A C++G + A + +M+ G P++ +Y+
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + + + + M+ L PNVF Y +I K ++ + LL EM +
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+P++ +Y ++ + V A RL+ M ++ ++PD TY
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGE 59
M+ ++P+ + L+ A C+ + +A + ++ KH+ +P TY+ L++G+ +
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ EA+ LF+EM ++ + +L++ K G + + +LREM S P+ +Y++
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDE 174
I + ++ R+L+ M+ +VP+ TY I K V EA++ DE
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 202 MALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMV 261
+AL + + + + P + T N++L LVR F + E ++ + K G P V ++ +
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAI 280
Query: 262 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERST 320
+ CK GK+EEA K F M + G+ P T + + L G D + +KM ER
Sbjct: 281 NAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 321 SCTIQELANAMRGKT 335
T+ + ++G T
Sbjct: 340 EPTLITYSILVKGLT 354
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 161/301 (53%), Gaps = 6/301 (1%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSE 62
F ++ I D LL ALC+ K+V A K ++ K+++I++ G +V G E
Sbjct: 226 FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPRE 285
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A +++ EM D+++++S++ K G++++ + M+ EPD Y+ +H
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 123 AFCEANDIHSVFRVLDSMKR-YNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
A +A+ + ++ +M+ + PNV TYN +I+ LCK K EEA Q+ DEM+E+G
Sbjct: 346 ALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 405
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P +Y+A + EV L+ +M K P TY M+++ L R FD +
Sbjct: 406 PTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLL 462
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLV 301
W+ M+++ P +S+Y VM+HGL GK+EEA Y++ M D+G+ P + +M+++
Sbjct: 463 WDEMKEKTVGPDLSSYIVMIHGLF-LNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 521
Query: 302 G 302
G
Sbjct: 522 G 522
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 42/258 (16%)
Query: 82 HNSLLEAMCKAGNIDEAHGMLREMRSIGAE-PDAFSYSIFIHAFCEANDIHSVFRVLDSM 140
++S++ + K D A ++ EMR ++ + I I +C +D+ +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 141 KRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL---------------------------- 172
KR+ L + + ++ LC+ + V +A L+
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSP 283
Query: 173 -------DEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMV 225
EM G D SY+++++ + +N L+L RM KE + PDR YN V
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 226 LKLLVRVGRFDRATEVWESM-EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE 284
+ L + A + ++M E++G P+V TY+ ++ LCK + K EEA + F+ M+++
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR-KTEEAKQVFDEMLEK 402
Query: 285 GIPP----YSSTVEMLRN 298
G+ P Y + + +LR
Sbjct: 403 GLFPTIRTYHAFMRILRT 420
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELS 61
E GI+P++ + L+ LCK + + A Q FD + PT++TY +R L GE
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE-- 422
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
E +L +M + C + + L+ +C+ + D + EM+ PD SY + I
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPN 148
H I + MK + PN
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI L LL+ C K + A D + + P T++ L+ GL +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
SEA L D M++R C +++ + ++ +CK G+ID A +L +M + E + YS
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I + C+ + M+ + PNV TY+ +I LC E+ +A +LL +MIER
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
NP+ ++NA++ ++ A +L M K ++ PD TY+ ++ R D A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++E M + +P+V TY+ +++G CK K +++E + F M G+ + T L
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAK-RIDEGVELFREMSQRGLVGNTVTYTTL 441
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 153/289 (52%), Gaps = 12/289 (4%)
Query: 6 IKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEAR 64
I+ ++ ++ +LCK +H A F +++ P V TYS L+ L + S+A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 65 KLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAF 124
+L +M+ERK +++ N+L++A K G + EA + EM +PD F+YS I+ F
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 125 CEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDE 184
C + + + + M + PNV TYN +I CK ++++E +L EM +RG +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 185 WSYNAIL-----AYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+Y ++ A CD A++ + +M + V P+ TYN +L L + G+ ++A
Sbjct: 436 VTYTTLIHGFFQARDCDNAQM-----VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
V+E +++ P++ TY++M+ G+C K GK+E+ F + +G+ P
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVKP 538
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
MVE G +P L+H L A D + P + TY ++V GL G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ A L ++M K +++ ++++++++CK + D+A + EM + G P+ +YS
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I C R+L M + PNV T+N +I K K+ EA +L DEMI+R
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD ++Y++++ C ++ A + M ++ P+ TYN ++ + R D
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
E++ M +RG + TY+ ++HG + + + A F+ MV +G+ P T L +
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQAR-DCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 300 LVGLGFLDIIEILADKMERS 319
L G L+ ++ + ++RS
Sbjct: 480 LCKNGKLEKAMVVFEYLQRS 499
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G++P++ L+ LC + A + D + + P V T++ L+ G+L EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
KL+DEM++R DI ++SL+ C +DEA M M S P+ +Y+ I+
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC+A I + M + LV N TY +I + + A + +M+ G +P+
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C ++ A+ + + + + P +TYN++++ + + G+ + +++
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S+ +G P V Y+ M+ G C +KG EEA F M ++G P S T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFC-RKGLKEEADALFRKMREDGPLPDSGT 577
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 147/327 (44%), Gaps = 37/327 (11%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI++ ++LL A+ K K + + + + + TY+IL+ ++S A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ +SLL C I +A ++ +M +G PD +++ IH
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD------------- 173
N ++D M + PN+ TY ++ LCK ++ A+ LL+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 174 ----------------------EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
EM +G P+ +Y+++++ C+ + A RL++ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + P+ T+N ++ V+ G+ A ++++ M KR P + TYS +++G C +L
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD-RL 381
Query: 272 EEACKYFEMMVDEGIPPYSSTVEMLRN 298
+EA FE+M+ + P T L N
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLIN 408
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 2/293 (0%)
Query: 42 PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGM 101
P++ ++ L+ + + + L ++M ++ +N L+ C+ I A +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L +M +G EP + S ++ +C I ++D M P+ T+ +I L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
+ K EA L+D M++RG P+ +Y ++ C R ++++A L+ +M + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ V+ L + D A ++ ME +G P+V TYS ++ LC + + +A + M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE-RWSDASRLLSDM 321
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKM-ERSTSCTIQELANAMRG 333
++ I P T L + V G L E L D+M +RS I ++ + G
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 9/274 (3%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL + +L +A LF M++ + I N LL A+ K D + +M+ +
Sbjct: 56 ILRNGLHSM-KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G + ++Y+I I+ FC + I +L M + P++ T + ++ C +++ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L+D+M+E G PD ++ ++ + + A+ L+ RM + P+ TY +V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L + G D A + ME +V YS ++ LCK + + ++A F M ++G+ P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-DDALNLFTEMENKGVRP 293
Query: 289 ----YSSTVEMLRNRLVGLGFLDIIEILADKMER 318
YSS + L N + D +L+D +ER
Sbjct: 294 NVITYSSLISCLCNY---ERWSDASRLLSDMIER 324
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
Y I+R + K+++A L M++ P + +N +L+ + ++ + L +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
+ + + +TYN+++ R + A + M K G+ PS+ T S +++G C K ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK-RI 171
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A + MV+ G P + T L
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTL 196
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
MV+ G +P++ + L+ LCK + +A + + K V TY+ L+ GL G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
S+A ++ +M++R D++ +L++ K GN+DEA + +EM +P+ +Y+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C ++ + D M PNV TYN +I CK V+E +L M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
N D ++YN ++ +C ++ +AL + M V PD T+ ++L L G + A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEML 296
++ M + Y + Y++M+HGLCK K+E+A + F + EG+ P + T ++
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKAD-KVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQF-FDNAKHEFTPTVKTYSILVRGLGDVGE 59
M++ G +PSI LLH C + A K + P V Y+ L+ GL GE
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +L +EM ++ D++ +N+LL +C +G +A MLR+M PD +++
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I F + ++ + M + ++ PN TYN II LC + ++ +A + D M +G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+ +YN +++ C V+ ++L RM+ E D TYN ++ +VG+ A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDE----GIPPYSSTVEM 295
+++ M R P + T+ +++HGLC G++E A F+ M + GI Y+ +
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLC-VNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 296 L 296
L
Sbjct: 431 L 431
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 2/286 (0%)
Query: 4 FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSE 62
+GI +Y L+H C+ + A K + P++ T+ L+ G V + +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIH 122
A L M++ +++ +N+L++ +CK G ++ A +L EM G D +Y+ +
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 123 AFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANP 182
C + R+L M + ++ P+V T+ +I K ++EA +L EMI+ +P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 183 DEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVW 242
+ +YN+I+ C + A + M + P+ TYN ++ + D +++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 243 ESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
+ M GF + TY+ ++HG C + GKL A F MV + P
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYC-QVGKLRVALDIFCWMVSRRVTP 384
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 32 FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 91
FF+ + P++ ++ L+ ++ +M D+ + L+ C+
Sbjct: 59 FFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCR 118
Query: 92 AGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFT 151
+ A +L +M +G EP ++ +H FC N I F ++ M + PNV
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
YN +I LCKN ++ A +LL+EM ++G D +YN +L C + A R++ M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKL 271
K ++ PD T+ ++ + V+ G D A E+++ M + P+ TY+ +++GLC G+L
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC-MHGRL 297
Query: 272 EEACKYFEMMVDEGIPPYSSTVEML 296
+A K F++M +G P T L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 8 PSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKL 66
PSI D +LL A + + F + + + + +++IL+ LS A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 67 FDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCE 126
+M++ I+ SLL C I +A ++ M G EP+ Y+ I C+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 127 ANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWS 186
+++ +L+ M++ L +V TYN ++ LC + + +A ++L +M++R NPD +
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 187 YNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESME 246
+ A++ + ++ A L M + +V P+ TYN ++ L GR A + ++ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 247 KRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEG 285
+G +P+V TY+ ++ G CK + ++E K F+ M EG
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFR-MVDEGMKLFQRMSCEG 346
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 62 EARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFI 121
+A LF EM+ + I+ LL A + ++M G D +S++I I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 122 HAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGAN 181
H FC + + VL M + P++ T+ ++ C ++ +A+ L+ M++ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 182 PDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEV 241
P+ YN ++ C E+N+AL L+ M K+ + D TYN +L L GR+ A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 242 WESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRL 300
M KR P V T++ ++ + K+G L+EA + ++ M+ + P + T + N L
Sbjct: 234 LRDMMKRSINPDVVTFTALID-VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGE 59
M++ + P+ + +++ LC + A + FD A P V TY+ L+ G
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ E KLF M DI +N+L+ C+ G + A + M S PD ++ I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
+H C +I S D M+ + YN +I LCK +KVE+A++L + G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVM 216
PD +Y ++ C A LI RM +E ++
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 96 DEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCI 155
++A + EM P ++ + A +V M+ Y + +++++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 156 IRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENV 215
I C+ ++ A +L +M++ G P ++ ++L C + A L+ M K
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 216 MPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
P+ YN ++ L + G + A E+ MEK+G V TY+ ++ GLC G+ +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC-YSGRWSDAA 231
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERST 320
+ M+ I P T L + V G LD + L +M +S+
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 12/220 (5%)
Query: 109 GAEPDAFS------YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKN 162
GA AFS + F+H+ F + M +P++ + ++
Sbjct: 29 GAAARAFSDYREKLRTGFLHSI----RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANL 84
Query: 163 EKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTY 222
+ E +M G + D +S+ ++ C + ++ AL ++ +M K P T+
Sbjct: 85 RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 223 NMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMV 282
+L V R A + M K G+ P+V Y+ ++ GLC K G+L A + M
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC-KNGELNIALELLNEME 203
Query: 283 DEGIPPYSSTVEMLRNRLVGLG-FLDIIEILADKMERSTS 321
+G+ T L L G + D +L D M+RS +
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ P++Y L+ L K+ A + FD+ +P TY+IL+ GL G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+ARKLF EM D +AHN+LL+ CK G + EA +LR G YS
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I A F + +M + N+ P++ Y +I+ L K K+E+A +LL M +G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+PD + YNA++ C R + L M++ PD T+ +++ + R G A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEA 274
E++ +EK G PSV+T++ ++ GLC K G+L+EA
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLC-KSGELKEA 462
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 13 LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLE 72
+D L A R++ + + + K P + Y+IL++GL G++ +A KL M
Sbjct: 310 IDGLFRA---RRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 73 RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHS 132
+ D +N++++A+C G ++E + EM + PDA +++I I + C +
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 133 VFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLL-------------------- 172
+ +++ P+V T+N +I LCK+ +++EA LL
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 173 ---DEMIER----------------GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
D M+E G++PD SYN ++ C +++ AL+L+ + +
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKK 268
+ PD TYN ++ L RVGR + A +++ + K F S + Y ++ C+K+
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKR 599
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 47 YSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML---- 102
+ +L+ +G +A + F M E C D+ +N +L M + +E ML
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR----EEVFFMLAFAV 185
Query: 103 -REMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
EM P+ +++ I + + ++ D M + PN TY +I LC+
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 162 NEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHT 221
++A +L EM G PD ++NA+L C + A L+ K+ +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 222 YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 281
Y+ ++ L R R+ +A E++ +M K+ P + Y++++ GL K GK+E+A K M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL-SKAGKIEDALKLLSSM 364
Query: 282 VDEGIPPYSSTVEMLRNRLVGLGFLD 307
+GI P + + L G G L+
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLE 390
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 45/345 (13%)
Query: 16 LLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ ++C+ V+ A + F K +P+V T++ L+ GL GEL EAR L +M E
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG 472
Query: 75 CPVDI---LAH--NSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEAND 129
P + L+H N + M ++G+I +A+ L G+ PD SY++ I+ FC A D
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 130 IHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNA 189
I ++L+ ++ L P+ TYN +I L + + EEA++L + +P Y +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA--VYRS 590
Query: 190 ILAYHCDRAEVNMALRLITRMTKENVMPDRHT---------------------------- 221
++ + C + +V +A L + K+ D T
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 222 ------YNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEAC 275
Y + L L + GRF A V+ + ++ + + ++HGLCK++ +L+ A
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKRE-QLDAAI 709
Query: 276 KYFEMMVDEGIPPYSSTVEMLRNRLV-GLGFLDIIEILADKMERS 319
+ F +D L + L+ ++I+ L ++MER+
Sbjct: 710 EVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERA 754
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 102 LREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCK 161
L E++S G D++ + + I A+ + MK ++ P+VFTYN I+R + +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 162 NEK-VEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRH 220
E A+ + +EM++ +P+ +++ ++ + + A ++ MT + P+R
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 221 TYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEM 280
TY +++ L + G D A +++ M+ G YP ++ ++ G C K G++ EA + +
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC-KLGRMVEAFELLRL 293
Query: 281 MVDE----GIPPYSSTVEML 296
+ G+ YSS ++ L
Sbjct: 294 FEKDGFVLGLRGYSSLIDGL 313
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Query: 117 YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMI 176
+ + I E N ++ L+ +K + + + + +I K E+A + M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 177 ERGANPDEWSYNAILAYHCDRAEV--NMALRLITRMTKENVMPDRHTYNMVLKLLVRVGR 234
E PD ++YN IL R EV +A + M K N P+ +T+ +++ L + GR
Sbjct: 155 EFDCRPDVFTYNVILRVMM-REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 235 FDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVE 294
A ++++ M RG P+ TY++++ GLC ++G ++A K F M G P S
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLC-QRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 295 MLRNRLVGLG 304
L + LG
Sbjct: 273 ALLDGFCKLG 282
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 152 YNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMT 211
+ +I L ++ + +Q L+E+ G + D + + +++ + A+ RM
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 212 KENVMPDRHTYNMVLKLLVRVGRFDR-ATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ + PD TYN++L++++R F A V+ M K P++ T+ +++ GL KKG+
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL-YKKGR 213
Query: 271 LEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
+A K F+ M GI P T +L + L G D L +M+ S
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 3 EFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSE 62
+F P++Y L+ C+++ V VA + + + + + GE
Sbjct: 580 DFRHSPAVYR--SLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETER 637
Query: 63 ARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA---HGMLREMRSIGAEPDAFSYSI 119
A + E+ RK + + + L +C++G EA +LRE + + P
Sbjct: 638 ALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVK--- 694
Query: 120 FIHAFCEANDIHSVFRV----LDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEM 175
IH C+ + + V LD+ + L+P V Y + L EK+E QL + M
Sbjct: 695 LIHGLCKREQLDAAIEVFLYTLDN--NFKLMPRVCNY-LLSSLLESTEKMEIVSQLTNRM 751
Query: 176 IERGANPDEWSYNAILAYHCDRAEV 200
G N D IL YH R +V
Sbjct: 752 ERAGYNVDSMLRFEILKYHRHRKQV 776
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 37/203 (18%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEA 63
G P I + L++ C+ + A + + + + +P TY+ L+ GL VG EA
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 64 RKLF---DEMLERKCPVD--------------ILAHNSLLEAMCKAGNID---------- 96
KLF D+ R P ++A N ++ + K +D
Sbjct: 572 FKLFYAKDDF--RHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQC 629
Query: 97 ----EAHGMLREMRSIGAEPDAFS---YSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNV 149
E LR + + D + Y+I++ C++ H V ++ ++
Sbjct: 630 FKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTP 689
Query: 150 FTYNCIIRKLCKNEKVEEAYQLL 172
+ +I LCK E+++ A ++
Sbjct: 690 PSCVKLIHGLCKREQLDAAIEVF 712
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
M++ G KP++ + L+ LCK+ +K A + + ++ + P V T++ L+ GL G
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 60 LSEARKLFDEMLERKC-PVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 118
+A +LF +++ ++ + S++ CK ++ A + M+ G P+ +Y+
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 119 IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIER 178
I+ C+A + +++ M +PN++TYN I LCK + EAY+LL++
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 179 GANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE------------------------- 213
G D +Y ++ C + ++N AL RM K
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 214 ----------NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHG 263
++P + TY ++ + G D A + + +M++ G P TY ++ G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 264 LCKKKGKLEEACKYFEMMVDEGIPP 288
LCKK ++EACK +E M+D G+ P
Sbjct: 578 LCKKS-MVDEACKLYEAMIDRGLSP 601
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 7 KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARK 65
KP+++ ++ CK + A F K + P V TY+ L+ G G A +
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 66 LFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFC 125
L + M + +I +N+ ++++CK EA+ +L + S G E D +Y+I I C
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 126 EANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEW 185
+ NDI+ M + ++ N +I C+ +K++E+ +L ++ G P +
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
+Y ++++ +C ++++AL+ M + +PD TY ++ L + D A +++E+M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 246 EKRGFYPSVSTYSVMVHGLCKK 267
RG P T + + CK+
Sbjct: 595 IDRGLSPPEVTRVTLAYEYCKR 616
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 131/268 (48%), Gaps = 6/268 (2%)
Query: 34 DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAG 93
D TP+ T + ++ ++G + A +FDEM R D ++ ++ + G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 94 NIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYN 153
I EA L M G PD + ++ + A CE ++ M PN+ +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+I LCK +++A+++L+EM+ G P+ +++ A++ C R A RL ++ +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 214 NVM-PDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLE 272
+ P+ HTY ++ + + +RA ++ M+++G +P+V+TY+ +++G C K G
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC-KAGSFG 410
Query: 273 EACKYFEMMVDEGIPP----YSSTVEML 296
A + +M DEG P Y++ ++ L
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 5 GIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVK----TYSILVRGLGDVGEL 60
G P+IY + + +LCK+ A++ + A F+ ++ TY+IL++ ++
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA---FSCGLEADGVTYTILIQEQCKQNDI 479
Query: 61 SEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIF 120
++A F M + D+ +N L+ A C+ + E+ + + + S+G P +Y+
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Query: 121 IHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGA 180
I +C+ DI + +MKR+ VP+ FTY +I LCK V+EA +L + MI+RG
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Query: 181 NPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
+P E + + +C R + A+ L+ + K+
Sbjct: 600 SPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
+L + G ++EA GM+ +M++ G P + + + + E I V D M
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
+VP+ +Y ++ ++ K++EA + L MI+RG PD + IL C+ VN A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
+M P+ + ++ L + G +A E+ E M + G+ P+V T++ ++ GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 265 CKKKGKLEEACKYFEMMV 282
C K+G E+A + F +V
Sbjct: 333 C-KRGWTEKAFRLFLKLV 349
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 16 LLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERK 74
L+ A C++K +K + + F PT +TY+ ++ G++ A K F M
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 75 CPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVF 134
C D + SL+ +CK +DEA + M G P + + +C+ ND +
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Query: 135 RVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYH 194
+L+ + + + V T ++RKLC +KV A +++E+ ++ D + A
Sbjct: 624 ILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
Query: 195 CDRAEVNMALRLITRMTK 212
+ + N+ L R+++
Sbjct: 681 SESGKNNLVTDLTERISR 698
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 154 CIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKE 213
C++R + ++ EA ++ +M +G P + N +L + + A + M+
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 214 NVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEE 273
V+PD +Y +++ R G+ A M +RGF P +T ++++ LC + G +
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENGLVNR 270
Query: 274 ACKYFEMMVDEGIPP 288
A YF M+D G P
Sbjct: 271 AIWYFRKMIDLGFKP 285
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 198 AEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTY 257
+N A+ ++ M + + P T N VL++ V +G + A V++ M RG P S+Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 258 SVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLD 307
+MV G C + GK++EA ++ M+ G P ++T ++ L G ++
Sbjct: 221 KLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 159/318 (50%), Gaps = 2/318 (0%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGE 59
++ G KP++ L+ LCK +H+ A + F+ + P V TY+ LV GL ++G
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
+A L +M++R+ +++ +L++A K G + EA + M + PD F+Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I+ C + ++ M+R PN Y +I CK+++VE+ ++ EM ++G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
+ +Y ++ +C ++A + +M+ PD TYN++L L G+ ++A
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNR 299
++E M KR ++ TY++++ G+CK GK+E+A F + +G+ P T + +
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKL-GKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 300 LVGLGFLDIIEILADKME 317
G + + L KM+
Sbjct: 478 FCRRGLIHEADSLFKKMK 495
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 5 GIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEA 63
G +P++ + L+ LC+ + A D K P V T++ L+ VG+L EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 64 RKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHA 123
++L++ M++ D+ + SL+ +C G +DEA M M G P+ Y+ IH
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 124 FCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPD 183
FC++ + ++ M + +V N TY +I+ C + + A ++ ++M R A PD
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 184 EWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWE 243
+YN +L C +V AL + M K + + TY ++++ + ++G+ + A +++
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 244 SMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSST 292
S+ +G P+V TY+ M+ G C ++G + EA F+ M ++G P S
Sbjct: 458 SLFSKGMKPNVITYTTMISGFC-RRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 6/299 (2%)
Query: 1 MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGE 59
M++ G +P + LL+ C ++ A FD F P V TY+ L+R L
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 60 LSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSI 119
L+ A +LF++M +++ +N+L+ +C+ G +A +LR+M EP+ +++
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 120 FIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERG 179
I AF + + + + M + ++ P+VFTY +I LC ++EA Q+ M G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 180 ANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRAT 239
P+E Y ++ C V +++ M+++ V+ + TY ++++ VGR D A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 240 EVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM----VDEGIPPYSSTVE 294
EV+ M R P + TY+V++ GLC GK+E+A FE M +D I Y+ ++
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLC-CNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 33 FDNAKHEFT--------PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNS 84
F++A FT P++ ++ L+ + + LF++M P + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 85 LLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYN 144
++ +C + A L +M +G EPD +++ ++ +C N I + D +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 145 LVPNVFTYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMAL 204
PNV TY +IR LCKN + A +L ++M G+ P+ +YNA++ C+ A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 205 RLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGL 264
L+ M K + P+ T+ ++ V+VG+ A E++ M + YP V TY +++GL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 265 CKKKGKLEEACKYFEMMVDEGIPP 288
C G L+EA + F +M G P
Sbjct: 304 C-MYGLLDEARQMFYLMERNGCYP 326
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 49 ILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSI 108
IL GL ++ + ++A LF M+ + I+ LL + K D + +M+ +
Sbjct: 54 ILRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 109 GAEPDAFSYSIFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEA 168
G P + +I +H C ++ L M + P++ T+ ++ C ++E+A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 169 YQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKL 228
L D+++ G P+ +Y ++ C +N A+ L +M P+ TYN ++
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 229 LVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPP 288
L +GR+ A + M KR P+V T++ ++ K GKL EA + + +M+ + P
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV-KVGKLMEAKELYNVMIQMSVYP 291
Query: 289 YSSTVEMLRNRLVGLGFLDIIEILADKMERS 319
T L N L G LD + MER+
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 186 SYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESM 245
SY IL + N AL L TRM +P + +L ++ ++ R+D ++E M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 246 EKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRN 298
+ G P + T ++++H +C +C + M+ G P T L N
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASC-FLGKMMKLGFEPDLVTFTSLLN 161
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 151 TYNCIIRKLCKNEKVEEAYQLLDEMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRM 210
+Y I+R N + +A L M+ P + +L+ ++ + L +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 211 TKENVMPDRHTYNMVLKLLVRVGRFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGK 270
+ P T N+V+ + + RA+ M K GF P + T++ +++G C +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN-R 168
Query: 271 LEEACKYFEMMVDEGIPP----YSSTVEML-RNR 299
+E+A F+ ++ G P Y++ + L +NR
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,418,635
Number of Sequences: 539616
Number of extensions: 5095934
Number of successful extensions: 20574
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 13216
Number of HSP's gapped (non-prelim): 2759
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)